Multiple sequence alignment - TraesCS6A01G335600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G335600 chr6A 100.000 2531 0 0 1 2531 568061132 568058602 0.000000e+00 4674
1 TraesCS6A01G335600 chr6A 92.917 480 33 1 2053 2531 425740469 425740948 0.000000e+00 697
2 TraesCS6A01G335600 chr6A 90.737 475 36 4 2053 2526 270374380 270373913 5.940000e-176 627
3 TraesCS6A01G335600 chr6A 84.298 363 35 9 1718 2060 568069009 568068649 4.030000e-88 335
4 TraesCS6A01G335600 chr5A 90.724 1919 99 38 379 2251 119065015 119066900 0.000000e+00 2484
5 TraesCS6A01G335600 chr5A 90.397 479 38 4 2053 2531 621687417 621687887 7.690000e-175 623
6 TraesCS6A01G335600 chr5A 90.208 480 38 4 2053 2531 371754263 371753792 3.580000e-173 617
7 TraesCS6A01G335600 chr5A 83.558 669 81 20 667 1308 555588707 555589373 1.300000e-167 599
8 TraesCS6A01G335600 chr5A 86.351 359 29 10 1718 2057 543950463 543950820 8.550000e-100 374
9 TraesCS6A01G335600 chr5A 80.365 219 31 7 724 934 535502992 535503206 3.370000e-34 156
10 TraesCS6A01G335600 chr3B 98.140 430 5 2 1 427 810401779 810401350 0.000000e+00 747
11 TraesCS6A01G335600 chr3B 91.121 473 31 4 757 1229 198146479 198146018 4.590000e-177 630
12 TraesCS6A01G335600 chr3B 85.359 362 33 10 1718 2060 145897886 145897526 8.610000e-95 357
13 TraesCS6A01G335600 chr6B 98.317 416 6 1 2 417 21204615 21205029 0.000000e+00 728
14 TraesCS6A01G335600 chr6B 84.490 245 28 9 263 501 50353990 50354230 1.510000e-57 233
15 TraesCS6A01G335600 chr2A 95.385 455 16 5 2 453 740735510 740735962 0.000000e+00 719
16 TraesCS6A01G335600 chr2A 97.349 415 10 1 2 416 157907826 157908239 0.000000e+00 704
17 TraesCS6A01G335600 chr3A 93.390 469 30 1 2064 2531 703928931 703928463 0.000000e+00 693
18 TraesCS6A01G335600 chr1A 92.708 480 33 2 2053 2531 520855722 520856200 0.000000e+00 691
19 TraesCS6A01G335600 chr1A 83.708 356 40 12 1718 2060 295972500 295972150 1.130000e-83 320
20 TraesCS6A01G335600 chr4A 96.163 417 13 2 2 416 536331409 536331824 0.000000e+00 678
21 TraesCS6A01G335600 chr4A 93.130 262 16 1 5 264 13058789 13058528 1.420000e-102 383
22 TraesCS6A01G335600 chr1B 96.163 417 13 2 2 416 229538731 229539146 0.000000e+00 678
23 TraesCS6A01G335600 chr1B 87.417 151 19 0 935 1085 20122655 20122505 9.310000e-40 174
24 TraesCS6A01G335600 chr2B 91.925 483 33 4 2053 2531 282451100 282451580 0.000000e+00 671
25 TraesCS6A01G335600 chr2B 85.393 178 16 8 316 493 127142448 127142281 2.590000e-40 176
26 TraesCS6A01G335600 chr5B 94.090 423 23 2 2 424 190582429 190582009 2.120000e-180 641
27 TraesCS6A01G335600 chr5B 84.367 371 30 12 1718 2060 239333318 239332948 3.120000e-89 339
28 TraesCS6A01G335600 chr5B 81.375 349 42 9 1396 1721 534471492 534471840 1.930000e-66 263
29 TraesCS6A01G335600 chr5D 84.650 658 76 16 669 1308 439710508 439711158 1.280000e-177 632
30 TraesCS6A01G335600 chr5D 81.609 348 30 15 1719 2033 390802431 390802085 8.980000e-65 257
31 TraesCS6A01G335600 chr7A 90.605 479 37 3 2053 2531 498729602 498729132 1.650000e-176 628
32 TraesCS6A01G335600 chr7A 89.562 479 42 4 2053 2531 283418364 283417894 3.600000e-168 601
33 TraesCS6A01G335600 chr7A 84.530 362 34 12 1718 2060 634665913 634665555 3.120000e-89 339
34 TraesCS6A01G335600 chr7A 83.289 377 30 13 1714 2060 299381910 299381537 1.460000e-82 316
35 TraesCS6A01G335600 chr7A 93.865 163 8 2 263 424 95890656 95890817 6.990000e-61 244
36 TraesCS6A01G335600 chr4D 93.561 264 13 2 5 264 386533440 386533177 8.490000e-105 390
37 TraesCS6A01G335600 chr4D 90.341 176 14 3 1883 2057 465051736 465051909 7.040000e-56 228
38 TraesCS6A01G335600 chr4D 88.800 125 12 2 378 501 29424577 29424454 4.360000e-33 152
39 TraesCS6A01G335600 chr6D 86.072 359 30 10 1718 2057 291654504 291654861 3.980000e-98 368
40 TraesCS6A01G335600 chr6D 92.857 112 6 2 383 493 291607300 291607410 7.250000e-36 161
41 TraesCS6A01G335600 chr2D 85.794 359 31 10 1718 2057 617518027 617518384 1.850000e-96 363
42 TraesCS6A01G335600 chr7D 82.258 372 30 22 1718 2057 431100900 431100533 3.190000e-74 289
43 TraesCS6A01G335600 chr4B 91.912 136 9 2 386 520 240136002 240136136 3.320000e-44 189


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G335600 chr6A 568058602 568061132 2530 True 4674 4674 100.000 1 2531 1 chr6A.!!$R2 2530
1 TraesCS6A01G335600 chr5A 119065015 119066900 1885 False 2484 2484 90.724 379 2251 1 chr5A.!!$F1 1872
2 TraesCS6A01G335600 chr5A 555588707 555589373 666 False 599 599 83.558 667 1308 1 chr5A.!!$F4 641
3 TraesCS6A01G335600 chr5D 439710508 439711158 650 False 632 632 84.650 669 1308 1 chr5D.!!$F1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
264 265 0.176219 CATTTCCCATGGCAACGCAT 59.824 50.0 6.09 0.0 42.51 4.73 F
462 470 0.441145 GGTTCACCGTCACAATACGC 59.559 55.0 0.00 0.0 41.51 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1497 1556 0.171679 TTTCGATTGCTGCTGCCATG 59.828 50.0 13.47 3.46 38.71 3.66 R
1894 1965 0.181587 TTGCACCGTTCCTTCTTCCA 59.818 50.0 0.00 0.00 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.579850 AAAATTCTGGTGATAATAAGCTCACA 57.420 30.769 4.20 0.00 42.83 3.58
26 27 8.757982 AAATTCTGGTGATAATAAGCTCACAT 57.242 30.769 4.20 0.00 42.83 3.21
27 28 8.757982 AATTCTGGTGATAATAAGCTCACATT 57.242 30.769 4.20 0.00 42.83 2.71
28 29 7.558161 TTCTGGTGATAATAAGCTCACATTG 57.442 36.000 4.20 0.00 42.83 2.82
29 30 6.057533 TCTGGTGATAATAAGCTCACATTGG 58.942 40.000 4.20 0.00 42.83 3.16
30 31 6.000246 TGGTGATAATAAGCTCACATTGGA 58.000 37.500 4.20 0.00 42.83 3.53
31 32 6.604171 TGGTGATAATAAGCTCACATTGGAT 58.396 36.000 4.20 0.00 42.83 3.41
32 33 6.712095 TGGTGATAATAAGCTCACATTGGATC 59.288 38.462 4.20 0.00 42.83 3.36
33 34 6.712095 GGTGATAATAAGCTCACATTGGATCA 59.288 38.462 4.20 2.02 42.83 2.92
34 35 7.392673 GGTGATAATAAGCTCACATTGGATCAT 59.607 37.037 4.20 0.00 42.83 2.45
35 36 9.440773 GTGATAATAAGCTCACATTGGATCATA 57.559 33.333 0.00 0.00 41.13 2.15
36 37 9.662947 TGATAATAAGCTCACATTGGATCATAG 57.337 33.333 0.00 0.00 0.00 2.23
37 38 9.881649 GATAATAAGCTCACATTGGATCATAGA 57.118 33.333 0.00 0.00 0.00 1.98
38 39 9.887629 ATAATAAGCTCACATTGGATCATAGAG 57.112 33.333 0.00 0.00 0.00 2.43
39 40 5.627182 AAGCTCACATTGGATCATAGAGT 57.373 39.130 0.00 0.00 0.00 3.24
40 41 6.737720 AAGCTCACATTGGATCATAGAGTA 57.262 37.500 0.00 0.00 0.00 2.59
41 42 6.931790 AGCTCACATTGGATCATAGAGTAT 57.068 37.500 0.00 0.00 0.00 2.12
42 43 8.427902 AAGCTCACATTGGATCATAGAGTATA 57.572 34.615 0.00 0.00 0.00 1.47
43 44 8.427902 AGCTCACATTGGATCATAGAGTATAA 57.572 34.615 0.00 0.00 0.00 0.98
44 45 9.044646 AGCTCACATTGGATCATAGAGTATAAT 57.955 33.333 0.00 0.00 0.00 1.28
45 46 9.664332 GCTCACATTGGATCATAGAGTATAATT 57.336 33.333 0.00 0.00 0.00 1.40
49 50 9.658799 ACATTGGATCATAGAGTATAATTTCGG 57.341 33.333 0.00 0.00 0.00 4.30
50 51 8.607459 CATTGGATCATAGAGTATAATTTCGGC 58.393 37.037 0.00 0.00 0.00 5.54
51 52 7.482169 TGGATCATAGAGTATAATTTCGGCT 57.518 36.000 0.00 0.00 0.00 5.52
52 53 7.323420 TGGATCATAGAGTATAATTTCGGCTG 58.677 38.462 0.00 0.00 0.00 4.85
53 54 7.178451 TGGATCATAGAGTATAATTTCGGCTGA 59.822 37.037 0.00 0.00 0.00 4.26
54 55 8.035394 GGATCATAGAGTATAATTTCGGCTGAA 58.965 37.037 3.13 3.13 0.00 3.02
65 66 4.920640 TTTCGGCTGAAATTAACACCAA 57.079 36.364 16.83 0.00 39.13 3.67
66 67 4.920640 TTCGGCTGAAATTAACACCAAA 57.079 36.364 5.22 0.00 0.00 3.28
67 68 4.497473 TCGGCTGAAATTAACACCAAAG 57.503 40.909 0.00 0.00 0.00 2.77
68 69 2.986479 CGGCTGAAATTAACACCAAAGC 59.014 45.455 0.00 0.00 0.00 3.51
69 70 3.305335 CGGCTGAAATTAACACCAAAGCT 60.305 43.478 0.00 0.00 0.00 3.74
70 71 4.631131 GGCTGAAATTAACACCAAAGCTT 58.369 39.130 0.00 0.00 0.00 3.74
71 72 4.686091 GGCTGAAATTAACACCAAAGCTTC 59.314 41.667 0.00 0.00 0.00 3.86
72 73 5.509670 GGCTGAAATTAACACCAAAGCTTCT 60.510 40.000 0.00 0.00 0.00 2.85
73 74 6.294508 GGCTGAAATTAACACCAAAGCTTCTA 60.295 38.462 0.00 0.00 0.00 2.10
74 75 7.315890 GCTGAAATTAACACCAAAGCTTCTAT 58.684 34.615 0.00 0.00 0.00 1.98
75 76 7.814587 GCTGAAATTAACACCAAAGCTTCTATT 59.185 33.333 0.00 0.00 0.00 1.73
76 77 9.132521 CTGAAATTAACACCAAAGCTTCTATTG 57.867 33.333 0.00 0.00 0.00 1.90
77 78 7.598493 TGAAATTAACACCAAAGCTTCTATTGC 59.402 33.333 0.00 0.00 0.00 3.56
78 79 6.588719 ATTAACACCAAAGCTTCTATTGCA 57.411 33.333 0.00 0.00 0.00 4.08
79 80 4.935352 AACACCAAAGCTTCTATTGCAA 57.065 36.364 0.00 0.00 0.00 4.08
80 81 4.935352 ACACCAAAGCTTCTATTGCAAA 57.065 36.364 1.71 0.00 0.00 3.68
81 82 5.275067 ACACCAAAGCTTCTATTGCAAAA 57.725 34.783 1.71 0.00 0.00 2.44
82 83 5.669477 ACACCAAAGCTTCTATTGCAAAAA 58.331 33.333 1.71 0.00 0.00 1.94
120 121 7.921786 TGGACTATTTGTTGGTAATCTTGAG 57.078 36.000 0.00 0.00 0.00 3.02
121 122 7.458397 TGGACTATTTGTTGGTAATCTTGAGT 58.542 34.615 0.00 0.00 0.00 3.41
122 123 7.606456 TGGACTATTTGTTGGTAATCTTGAGTC 59.394 37.037 0.00 0.00 0.00 3.36
123 124 7.201530 GGACTATTTGTTGGTAATCTTGAGTCG 60.202 40.741 0.00 0.00 31.36 4.18
124 125 7.159372 ACTATTTGTTGGTAATCTTGAGTCGT 58.841 34.615 0.00 0.00 0.00 4.34
125 126 5.917541 TTTGTTGGTAATCTTGAGTCGTC 57.082 39.130 0.00 0.00 0.00 4.20
126 127 4.866508 TGTTGGTAATCTTGAGTCGTCT 57.133 40.909 0.00 0.00 0.00 4.18
127 128 5.209818 TGTTGGTAATCTTGAGTCGTCTT 57.790 39.130 0.00 0.00 0.00 3.01
128 129 4.988540 TGTTGGTAATCTTGAGTCGTCTTG 59.011 41.667 0.00 0.00 0.00 3.02
129 130 5.221362 TGTTGGTAATCTTGAGTCGTCTTGA 60.221 40.000 0.00 0.00 0.00 3.02
130 131 5.462530 TGGTAATCTTGAGTCGTCTTGAA 57.537 39.130 0.00 0.00 0.00 2.69
131 132 5.227908 TGGTAATCTTGAGTCGTCTTGAAC 58.772 41.667 0.00 0.00 0.00 3.18
132 133 5.010719 TGGTAATCTTGAGTCGTCTTGAACT 59.989 40.000 0.00 0.00 0.00 3.01
133 134 5.927115 GGTAATCTTGAGTCGTCTTGAACTT 59.073 40.000 0.00 0.00 0.00 2.66
134 135 7.088905 GGTAATCTTGAGTCGTCTTGAACTTA 58.911 38.462 0.00 0.00 0.00 2.24
135 136 7.597743 GGTAATCTTGAGTCGTCTTGAACTTAA 59.402 37.037 0.00 0.00 0.00 1.85
136 137 8.975439 GTAATCTTGAGTCGTCTTGAACTTAAA 58.025 33.333 0.00 0.00 0.00 1.52
137 138 8.608844 AATCTTGAGTCGTCTTGAACTTAAAT 57.391 30.769 0.00 0.00 0.00 1.40
138 139 9.706691 AATCTTGAGTCGTCTTGAACTTAAATA 57.293 29.630 0.00 0.00 0.00 1.40
139 140 9.877178 ATCTTGAGTCGTCTTGAACTTAAATAT 57.123 29.630 0.00 0.00 0.00 1.28
140 141 9.706691 TCTTGAGTCGTCTTGAACTTAAATATT 57.293 29.630 0.00 0.00 0.00 1.28
141 142 9.746711 CTTGAGTCGTCTTGAACTTAAATATTG 57.253 33.333 0.00 0.00 0.00 1.90
142 143 8.251750 TGAGTCGTCTTGAACTTAAATATTGG 57.748 34.615 0.00 0.00 0.00 3.16
143 144 7.073342 AGTCGTCTTGAACTTAAATATTGGC 57.927 36.000 0.00 0.00 0.00 4.52
144 145 6.879458 AGTCGTCTTGAACTTAAATATTGGCT 59.121 34.615 0.00 0.00 0.00 4.75
145 146 7.390718 AGTCGTCTTGAACTTAAATATTGGCTT 59.609 33.333 0.00 0.00 0.00 4.35
146 147 8.021396 GTCGTCTTGAACTTAAATATTGGCTTT 58.979 33.333 0.00 0.00 0.00 3.51
147 148 9.221933 TCGTCTTGAACTTAAATATTGGCTTTA 57.778 29.630 0.00 0.00 0.00 1.85
148 149 9.274065 CGTCTTGAACTTAAATATTGGCTTTAC 57.726 33.333 0.00 0.00 0.00 2.01
160 161 9.914131 AAATATTGGCTTTACAAGAAGACTTTC 57.086 29.630 0.00 0.00 35.62 2.62
161 162 8.870075 ATATTGGCTTTACAAGAAGACTTTCT 57.130 30.769 0.00 0.00 45.51 2.52
200 201 7.765695 AGATGAGCAAGAATTTTAGAAACCA 57.234 32.000 0.00 0.00 0.00 3.67
201 202 8.181904 AGATGAGCAAGAATTTTAGAAACCAA 57.818 30.769 0.00 0.00 0.00 3.67
202 203 8.810041 AGATGAGCAAGAATTTTAGAAACCAAT 58.190 29.630 0.00 0.00 0.00 3.16
203 204 8.767478 ATGAGCAAGAATTTTAGAAACCAATG 57.233 30.769 0.00 0.00 0.00 2.82
204 205 7.725251 TGAGCAAGAATTTTAGAAACCAATGT 58.275 30.769 0.00 0.00 0.00 2.71
205 206 8.203485 TGAGCAAGAATTTTAGAAACCAATGTT 58.797 29.630 0.00 0.00 35.82 2.71
206 207 8.593492 AGCAAGAATTTTAGAAACCAATGTTC 57.407 30.769 0.00 0.00 32.15 3.18
207 208 7.657354 AGCAAGAATTTTAGAAACCAATGTTCC 59.343 33.333 0.00 0.00 32.15 3.62
208 209 7.440856 GCAAGAATTTTAGAAACCAATGTTCCA 59.559 33.333 0.00 0.00 32.15 3.53
209 210 9.492973 CAAGAATTTTAGAAACCAATGTTCCAT 57.507 29.630 0.00 0.00 32.15 3.41
214 215 9.625747 ATTTTAGAAACCAATGTTCCATTTTGT 57.374 25.926 0.00 0.00 32.15 2.83
215 216 9.454859 TTTTAGAAACCAATGTTCCATTTTGTT 57.545 25.926 0.00 0.00 32.15 2.83
218 219 8.831715 AGAAACCAATGTTCCATTTTGTTATC 57.168 30.769 0.00 0.00 32.15 1.75
219 220 7.877612 AGAAACCAATGTTCCATTTTGTTATCC 59.122 33.333 0.00 0.00 32.15 2.59
220 221 6.678568 ACCAATGTTCCATTTTGTTATCCA 57.321 33.333 0.00 0.00 0.00 3.41
221 222 6.463360 ACCAATGTTCCATTTTGTTATCCAC 58.537 36.000 0.00 0.00 0.00 4.02
222 223 5.576384 CCAATGTTCCATTTTGTTATCCACG 59.424 40.000 0.00 0.00 0.00 4.94
223 224 5.975693 ATGTTCCATTTTGTTATCCACGT 57.024 34.783 0.00 0.00 0.00 4.49
224 225 7.309177 CAATGTTCCATTTTGTTATCCACGTA 58.691 34.615 0.00 0.00 0.00 3.57
225 226 6.879276 TGTTCCATTTTGTTATCCACGTAA 57.121 33.333 0.00 0.00 0.00 3.18
226 227 6.670233 TGTTCCATTTTGTTATCCACGTAAC 58.330 36.000 0.00 0.00 35.60 2.50
227 228 5.533533 TCCATTTTGTTATCCACGTAACG 57.466 39.130 0.00 0.00 37.37 3.18
228 229 4.996122 TCCATTTTGTTATCCACGTAACGT 59.004 37.500 0.00 0.00 42.36 3.99
229 230 6.162079 TCCATTTTGTTATCCACGTAACGTA 58.838 36.000 0.00 0.00 38.32 3.57
230 231 6.648310 TCCATTTTGTTATCCACGTAACGTAA 59.352 34.615 0.00 0.00 38.32 3.18
231 232 7.333921 TCCATTTTGTTATCCACGTAACGTAAT 59.666 33.333 0.00 0.00 38.32 1.89
232 233 7.637132 CCATTTTGTTATCCACGTAACGTAATC 59.363 37.037 0.00 0.00 38.32 1.75
233 234 7.649370 TTTTGTTATCCACGTAACGTAATCA 57.351 32.000 0.00 0.00 38.32 2.57
234 235 7.830940 TTTGTTATCCACGTAACGTAATCAT 57.169 32.000 0.00 0.00 38.32 2.45
235 236 7.453980 TTGTTATCCACGTAACGTAATCATC 57.546 36.000 0.00 0.00 38.32 2.92
236 237 6.798482 TGTTATCCACGTAACGTAATCATCT 58.202 36.000 0.00 0.00 38.32 2.90
237 238 6.693978 TGTTATCCACGTAACGTAATCATCTG 59.306 38.462 0.00 0.00 38.32 2.90
238 239 4.707030 TCCACGTAACGTAATCATCTGT 57.293 40.909 0.00 0.00 38.32 3.41
239 240 5.063180 TCCACGTAACGTAATCATCTGTT 57.937 39.130 0.00 0.00 38.32 3.16
240 241 5.097529 TCCACGTAACGTAATCATCTGTTC 58.902 41.667 0.00 0.00 38.32 3.18
241 242 4.860352 CCACGTAACGTAATCATCTGTTCA 59.140 41.667 0.00 0.00 38.32 3.18
242 243 5.346551 CCACGTAACGTAATCATCTGTTCAA 59.653 40.000 0.00 0.00 38.32 2.69
243 244 6.035650 CCACGTAACGTAATCATCTGTTCAAT 59.964 38.462 0.00 0.00 38.32 2.57
244 245 7.412563 CCACGTAACGTAATCATCTGTTCAATT 60.413 37.037 0.00 0.00 38.32 2.32
245 246 7.630987 CACGTAACGTAATCATCTGTTCAATTC 59.369 37.037 0.00 0.00 38.32 2.17
246 247 7.329962 ACGTAACGTAATCATCTGTTCAATTCA 59.670 33.333 0.00 0.00 38.73 2.57
247 248 8.328146 CGTAACGTAATCATCTGTTCAATTCAT 58.672 33.333 0.00 0.00 0.00 2.57
248 249 9.988350 GTAACGTAATCATCTGTTCAATTCATT 57.012 29.630 0.00 0.00 0.00 2.57
250 251 9.559958 AACGTAATCATCTGTTCAATTCATTTC 57.440 29.630 0.00 0.00 0.00 2.17
251 252 8.184192 ACGTAATCATCTGTTCAATTCATTTCC 58.816 33.333 0.00 0.00 0.00 3.13
252 253 7.645340 CGTAATCATCTGTTCAATTCATTTCCC 59.355 37.037 0.00 0.00 0.00 3.97
253 254 7.484993 AATCATCTGTTCAATTCATTTCCCA 57.515 32.000 0.00 0.00 0.00 4.37
254 255 7.670605 ATCATCTGTTCAATTCATTTCCCAT 57.329 32.000 0.00 0.00 0.00 4.00
255 256 6.869695 TCATCTGTTCAATTCATTTCCCATG 58.130 36.000 0.00 0.00 0.00 3.66
256 257 5.664294 TCTGTTCAATTCATTTCCCATGG 57.336 39.130 4.14 4.14 0.00 3.66
257 258 4.081531 TCTGTTCAATTCATTTCCCATGGC 60.082 41.667 6.09 0.00 0.00 4.40
258 259 3.581770 TGTTCAATTCATTTCCCATGGCA 59.418 39.130 6.09 0.00 0.00 4.92
259 260 4.041321 TGTTCAATTCATTTCCCATGGCAA 59.959 37.500 6.09 0.00 0.00 4.52
260 261 4.205065 TCAATTCATTTCCCATGGCAAC 57.795 40.909 6.09 0.00 0.00 4.17
261 262 2.931325 CAATTCATTTCCCATGGCAACG 59.069 45.455 6.09 0.00 42.51 4.10
262 263 0.246086 TTCATTTCCCATGGCAACGC 59.754 50.000 6.09 0.00 42.51 4.84
263 264 0.897401 TCATTTCCCATGGCAACGCA 60.897 50.000 6.09 0.00 42.51 5.24
264 265 0.176219 CATTTCCCATGGCAACGCAT 59.824 50.000 6.09 0.00 42.51 4.73
265 266 0.903942 ATTTCCCATGGCAACGCATT 59.096 45.000 6.09 0.00 42.51 3.56
266 267 0.683973 TTTCCCATGGCAACGCATTT 59.316 45.000 6.09 0.00 42.51 2.32
267 268 0.683973 TTCCCATGGCAACGCATTTT 59.316 45.000 6.09 0.00 42.51 1.82
268 269 0.683973 TCCCATGGCAACGCATTTTT 59.316 45.000 6.09 0.00 42.51 1.94
269 270 1.895798 TCCCATGGCAACGCATTTTTA 59.104 42.857 6.09 0.00 42.51 1.52
270 271 2.499289 TCCCATGGCAACGCATTTTTAT 59.501 40.909 6.09 0.00 42.51 1.40
271 272 3.701542 TCCCATGGCAACGCATTTTTATA 59.298 39.130 6.09 0.00 42.51 0.98
272 273 4.343526 TCCCATGGCAACGCATTTTTATAT 59.656 37.500 6.09 0.00 42.51 0.86
273 274 4.448395 CCCATGGCAACGCATTTTTATATG 59.552 41.667 6.09 0.00 42.51 1.78
274 275 5.288015 CCATGGCAACGCATTTTTATATGA 58.712 37.500 0.00 0.00 42.51 2.15
275 276 5.752472 CCATGGCAACGCATTTTTATATGAA 59.248 36.000 0.00 0.00 42.51 2.57
276 277 6.257411 CCATGGCAACGCATTTTTATATGAAA 59.743 34.615 0.00 0.00 42.51 2.69
277 278 7.041916 CCATGGCAACGCATTTTTATATGAAAT 60.042 33.333 0.00 0.00 42.51 2.17
278 279 8.976471 CATGGCAACGCATTTTTATATGAAATA 58.024 29.630 0.00 0.00 42.51 1.40
279 280 9.709495 ATGGCAACGCATTTTTATATGAAATAT 57.291 25.926 0.00 0.00 41.18 1.28
280 281 9.539825 TGGCAACGCATTTTTATATGAAATATT 57.460 25.926 0.00 0.00 39.34 1.28
362 363 9.703892 AAAATATGACGAAAAATGAACCATCAA 57.296 25.926 0.00 0.00 39.49 2.57
363 364 8.915871 AATATGACGAAAAATGAACCATCAAG 57.084 30.769 0.00 0.00 39.49 3.02
364 365 5.766150 TGACGAAAAATGAACCATCAAGT 57.234 34.783 0.00 0.00 39.49 3.16
365 366 6.869315 TGACGAAAAATGAACCATCAAGTA 57.131 33.333 0.00 0.00 39.49 2.24
366 367 6.898041 TGACGAAAAATGAACCATCAAGTAG 58.102 36.000 0.00 0.00 39.49 2.57
367 368 6.072728 TGACGAAAAATGAACCATCAAGTAGG 60.073 38.462 0.00 0.00 39.49 3.18
368 369 5.768164 ACGAAAAATGAACCATCAAGTAGGT 59.232 36.000 0.00 0.00 39.49 3.08
376 377 4.820894 ACCATCAAGTAGGTTCTACCAC 57.179 45.455 0.00 0.00 41.95 4.16
377 378 4.426704 ACCATCAAGTAGGTTCTACCACT 58.573 43.478 0.00 0.00 41.95 4.00
378 379 4.844655 ACCATCAAGTAGGTTCTACCACTT 59.155 41.667 0.00 3.83 41.95 3.16
379 380 5.309806 ACCATCAAGTAGGTTCTACCACTTT 59.690 40.000 9.47 0.00 41.95 2.66
380 381 6.183361 ACCATCAAGTAGGTTCTACCACTTTT 60.183 38.462 9.47 2.00 41.95 2.27
381 382 7.016858 ACCATCAAGTAGGTTCTACCACTTTTA 59.983 37.037 9.47 4.51 41.95 1.52
382 383 8.047310 CCATCAAGTAGGTTCTACCACTTTTAT 58.953 37.037 9.47 5.92 41.95 1.40
383 384 9.099454 CATCAAGTAGGTTCTACCACTTTTATC 57.901 37.037 9.47 0.00 41.95 1.75
384 385 7.318141 TCAAGTAGGTTCTACCACTTTTATCG 58.682 38.462 9.47 0.00 41.95 2.92
389 390 1.137479 TCTACCACTTTTATCGCCCGG 59.863 52.381 0.00 0.00 0.00 5.73
410 411 1.576920 CAACGCACGGGCATTTGTA 59.423 52.632 11.77 0.00 41.24 2.41
416 417 2.736081 CGCACGGGCATTTGTACTAGTA 60.736 50.000 11.77 0.00 41.24 1.82
417 418 3.264104 GCACGGGCATTTGTACTAGTAA 58.736 45.455 3.77 0.00 40.72 2.24
436 444 9.998106 ACTAGTAATAATAAAGCACGGATTGAT 57.002 29.630 0.00 0.00 0.00 2.57
440 448 9.944663 GTAATAATAAAGCACGGATTGATTTCA 57.055 29.630 0.00 0.00 39.73 2.69
462 470 0.441145 GGTTCACCGTCACAATACGC 59.559 55.000 0.00 0.00 41.51 4.42
465 473 1.705256 TCACCGTCACAATACGCTTC 58.295 50.000 0.00 0.00 41.51 3.86
467 475 2.066262 CACCGTCACAATACGCTTCTT 58.934 47.619 0.00 0.00 41.51 2.52
469 477 2.735134 ACCGTCACAATACGCTTCTTTC 59.265 45.455 0.00 0.00 41.51 2.62
470 478 2.093783 CCGTCACAATACGCTTCTTTCC 59.906 50.000 0.00 0.00 41.51 3.13
476 485 4.393062 CACAATACGCTTCTTTCCTGTGAT 59.607 41.667 0.00 0.00 35.97 3.06
493 502 5.399301 CCTGTGATTTTACGCTTTCAGTTTG 59.601 40.000 0.00 0.00 0.00 2.93
681 702 1.379443 TCGCCTCCAGTACGATGGT 60.379 57.895 1.40 0.00 41.43 3.55
692 713 3.461773 CGATGGTGTCGGAGGCCT 61.462 66.667 3.86 3.86 46.47 5.19
722 743 1.745489 GCGCGGAGGATTCCACTTT 60.745 57.895 8.83 0.00 44.26 2.66
897 937 2.116983 GAGAAGGAGGTGTGCTGGCA 62.117 60.000 0.00 0.00 0.00 4.92
906 946 1.610379 TGTGCTGGCAGAGGAGCTA 60.610 57.895 20.86 0.00 36.11 3.32
1173 1225 3.612681 GGCGGCGGCTGGTCTATA 61.613 66.667 27.22 0.00 39.81 1.31
1174 1226 2.657237 GCGGCGGCTGGTCTATAT 59.343 61.111 9.78 0.00 35.83 0.86
1175 1227 1.601419 GGCGGCGGCTGGTCTATATA 61.601 60.000 27.22 0.00 39.81 0.86
1176 1228 0.460311 GCGGCGGCTGGTCTATATAT 59.540 55.000 9.78 0.00 35.83 0.86
1197 1249 2.906389 TGTTCCACTGGAATAGCTGAGT 59.094 45.455 13.80 0.00 44.04 3.41
1268 1322 1.869767 GGTAAATGCTCTGCTCATCGG 59.130 52.381 0.00 0.00 0.00 4.18
1318 1377 4.058817 GTGTCTGGATCTCACGTTTTCTT 58.941 43.478 0.00 0.00 0.00 2.52
1333 1392 6.300902 CACGTTTTCTTCTCAAATTCATCGAC 59.699 38.462 0.00 0.00 0.00 4.20
1340 1399 7.745972 TCTTCTCAAATTCATCGACAAATCTG 58.254 34.615 0.00 0.00 0.00 2.90
1348 1407 5.139435 TCATCGACAAATCTGAACTCTGT 57.861 39.130 0.00 0.00 0.00 3.41
1363 1422 6.978338 TGAACTCTGTACTTTGATTAGTCGT 58.022 36.000 0.00 0.00 0.00 4.34
1417 1476 0.883370 GTTTCAGGGTCCGGTCACAC 60.883 60.000 3.17 0.00 0.00 3.82
1497 1556 1.390463 GCGACACCGACAAGAGAAATC 59.610 52.381 0.00 0.00 38.22 2.17
1534 1593 4.959399 GCAGCAGCTCTTGATCCT 57.041 55.556 0.00 0.00 37.91 3.24
1561 1620 3.818586 CCACATTGGCATGTTCCAC 57.181 52.632 0.00 0.00 41.16 4.02
1572 1631 2.352715 GCATGTTCCACACTTTTAGGCC 60.353 50.000 0.00 0.00 0.00 5.19
1576 1635 2.740447 GTTCCACACTTTTAGGCCTACG 59.260 50.000 13.46 6.67 0.00 3.51
1586 1645 6.316390 CACTTTTAGGCCTACGAATGAAATCT 59.684 38.462 13.46 0.00 0.00 2.40
1595 1654 6.566753 GCCTACGAATGAAATCTAATGGCTTC 60.567 42.308 0.00 0.00 33.45 3.86
1600 1659 7.094205 ACGAATGAAATCTAATGGCTTCTTTGT 60.094 33.333 0.00 0.00 0.00 2.83
1603 1662 9.860898 AATGAAATCTAATGGCTTCTTTGTTAC 57.139 29.630 0.00 0.00 0.00 2.50
1627 1686 3.747529 TGCTTGCGTCCATACATGATATG 59.252 43.478 0.00 4.12 0.00 1.78
1657 1717 5.681337 TTTGAATGTTCGCATAGACAACA 57.319 34.783 0.00 0.00 36.70 3.33
1678 1738 0.928229 ATTTGAATCGCCGCGTCTAC 59.072 50.000 13.39 4.12 0.00 2.59
1699 1759 8.352942 GTCTACACATGATTTCCTTTTCTGTTT 58.647 33.333 0.00 0.00 0.00 2.83
1716 1776 9.883142 TTTTCTGTTTGGAAGAATTATTGTGTT 57.117 25.926 0.00 0.00 33.79 3.32
1738 1798 3.918220 CTCGATGCAGAACGGCGC 61.918 66.667 6.90 0.00 36.28 6.53
1893 1964 1.760029 CAAAGGAGGAGGAGAGGTAGC 59.240 57.143 0.00 0.00 0.00 3.58
1894 1965 1.314895 AAGGAGGAGGAGAGGTAGCT 58.685 55.000 0.00 0.00 0.00 3.32
1896 1967 0.469144 GGAGGAGGAGAGGTAGCTGG 60.469 65.000 0.00 0.00 0.00 4.85
1906 1989 2.835156 AGAGGTAGCTGGAAGAAGGAAC 59.165 50.000 0.00 0.00 34.07 3.62
1913 1996 0.181587 TGGAAGAAGGAACGGTGCAA 59.818 50.000 0.00 0.00 0.00 4.08
1947 2030 2.029844 GCGAGGACACTGGTCTTGC 61.030 63.158 0.00 0.00 43.77 4.01
1959 2042 3.684990 TCTTGCGCGTGAGGAGCT 61.685 61.111 8.43 0.00 42.55 4.09
1972 2055 2.598467 GAGCTCCTCTCCTCGGGA 59.402 66.667 0.87 0.00 35.77 5.14
2025 2109 3.496130 CACTTCAGAGCAAGGTACTGTTG 59.504 47.826 0.00 0.00 40.86 3.33
2035 2119 4.620184 GCAAGGTACTGTTGTAGAACTACG 59.380 45.833 4.21 0.00 40.86 3.51
2051 2135 1.651138 CTACGAAGAAGCAAGCTGACG 59.349 52.381 0.00 2.50 0.00 4.35
2120 2204 5.940470 ACCATGGAAAATCTGTGTAGTTCTC 59.060 40.000 21.47 0.00 0.00 2.87
2160 2244 7.502060 TTCTGGTCTCAAGGAGAATTCTTAT 57.498 36.000 9.87 0.00 40.59 1.73
2163 2247 6.653989 TGGTCTCAAGGAGAATTCTTATTCC 58.346 40.000 9.87 6.39 40.59 3.01
2209 2293 6.421485 ACATTGTAGATTCCAATCTCTTGCT 58.579 36.000 5.05 0.00 44.30 3.91
2251 2335 9.409312 CTGTTTTTCAAATGCTTATCATGTACA 57.591 29.630 0.00 0.00 35.13 2.90
2252 2336 9.926158 TGTTTTTCAAATGCTTATCATGTACAT 57.074 25.926 1.41 1.41 35.13 2.29
2262 2346 9.712305 ATGCTTATCATGTACATACTAAACTCC 57.288 33.333 8.32 0.59 33.26 3.85
2263 2347 8.148351 TGCTTATCATGTACATACTAAACTCCC 58.852 37.037 8.32 0.00 0.00 4.30
2264 2348 8.368668 GCTTATCATGTACATACTAAACTCCCT 58.631 37.037 8.32 0.00 0.00 4.20
2265 2349 9.698309 CTTATCATGTACATACTAAACTCCCTG 57.302 37.037 8.32 0.00 0.00 4.45
2266 2350 5.914033 TCATGTACATACTAAACTCCCTGC 58.086 41.667 8.32 0.00 0.00 4.85
2267 2351 4.748277 TGTACATACTAAACTCCCTGCC 57.252 45.455 0.00 0.00 0.00 4.85
2268 2352 3.453353 TGTACATACTAAACTCCCTGCCC 59.547 47.826 0.00 0.00 0.00 5.36
2269 2353 1.844497 ACATACTAAACTCCCTGCCCC 59.156 52.381 0.00 0.00 0.00 5.80
2270 2354 1.143073 CATACTAAACTCCCTGCCCCC 59.857 57.143 0.00 0.00 0.00 5.40
2271 2355 0.420272 TACTAAACTCCCTGCCCCCT 59.580 55.000 0.00 0.00 0.00 4.79
2272 2356 0.914902 ACTAAACTCCCTGCCCCCTC 60.915 60.000 0.00 0.00 0.00 4.30
2273 2357 1.618447 TAAACTCCCTGCCCCCTCC 60.618 63.158 0.00 0.00 0.00 4.30
2274 2358 2.132946 TAAACTCCCTGCCCCCTCCT 62.133 60.000 0.00 0.00 0.00 3.69
2275 2359 3.523681 AACTCCCTGCCCCCTCCTT 62.524 63.158 0.00 0.00 0.00 3.36
2276 2360 3.093172 CTCCCTGCCCCCTCCTTC 61.093 72.222 0.00 0.00 0.00 3.46
2277 2361 3.626596 TCCCTGCCCCCTCCTTCT 61.627 66.667 0.00 0.00 0.00 2.85
2278 2362 2.615288 CCCTGCCCCCTCCTTCTT 60.615 66.667 0.00 0.00 0.00 2.52
2279 2363 2.684499 CCCTGCCCCCTCCTTCTTC 61.684 68.421 0.00 0.00 0.00 2.87
2280 2364 1.617839 CCTGCCCCCTCCTTCTTCT 60.618 63.158 0.00 0.00 0.00 2.85
2281 2365 1.606531 CTGCCCCCTCCTTCTTCTG 59.393 63.158 0.00 0.00 0.00 3.02
2282 2366 1.151810 TGCCCCCTCCTTCTTCTGT 60.152 57.895 0.00 0.00 0.00 3.41
2283 2367 1.201429 TGCCCCCTCCTTCTTCTGTC 61.201 60.000 0.00 0.00 0.00 3.51
2284 2368 1.201429 GCCCCCTCCTTCTTCTGTCA 61.201 60.000 0.00 0.00 0.00 3.58
2285 2369 0.615850 CCCCCTCCTTCTTCTGTCAC 59.384 60.000 0.00 0.00 0.00 3.67
2286 2370 1.352083 CCCCTCCTTCTTCTGTCACA 58.648 55.000 0.00 0.00 0.00 3.58
2287 2371 1.912043 CCCCTCCTTCTTCTGTCACAT 59.088 52.381 0.00 0.00 0.00 3.21
2288 2372 2.355513 CCCCTCCTTCTTCTGTCACATG 60.356 54.545 0.00 0.00 0.00 3.21
2289 2373 2.304180 CCCTCCTTCTTCTGTCACATGT 59.696 50.000 0.00 0.00 0.00 3.21
2290 2374 3.332919 CCTCCTTCTTCTGTCACATGTG 58.667 50.000 20.18 20.18 0.00 3.21
2291 2375 3.244353 CCTCCTTCTTCTGTCACATGTGT 60.244 47.826 24.63 0.00 0.00 3.72
2292 2376 4.384056 CTCCTTCTTCTGTCACATGTGTT 58.616 43.478 24.63 0.00 0.00 3.32
2293 2377 4.129380 TCCTTCTTCTGTCACATGTGTTG 58.871 43.478 24.63 15.43 0.00 3.33
2294 2378 3.879295 CCTTCTTCTGTCACATGTGTTGT 59.121 43.478 24.63 0.00 39.91 3.32
2295 2379 4.336433 CCTTCTTCTGTCACATGTGTTGTT 59.664 41.667 24.63 0.00 36.00 2.83
2296 2380 5.484173 TTCTTCTGTCACATGTGTTGTTC 57.516 39.130 24.63 11.82 36.00 3.18
2297 2381 3.876914 TCTTCTGTCACATGTGTTGTTCC 59.123 43.478 24.63 8.22 36.00 3.62
2298 2382 2.571212 TCTGTCACATGTGTTGTTCCC 58.429 47.619 24.63 6.67 36.00 3.97
2299 2383 2.172505 TCTGTCACATGTGTTGTTCCCT 59.827 45.455 24.63 0.00 36.00 4.20
2300 2384 2.951642 CTGTCACATGTGTTGTTCCCTT 59.048 45.455 24.63 0.00 36.00 3.95
2301 2385 2.687425 TGTCACATGTGTTGTTCCCTTG 59.313 45.455 24.63 0.00 36.00 3.61
2302 2386 2.687935 GTCACATGTGTTGTTCCCTTGT 59.312 45.455 24.63 0.00 36.00 3.16
2303 2387 2.948979 TCACATGTGTTGTTCCCTTGTC 59.051 45.455 24.63 0.00 36.00 3.18
2304 2388 2.687425 CACATGTGTTGTTCCCTTGTCA 59.313 45.455 18.03 0.00 36.00 3.58
2305 2389 3.318839 CACATGTGTTGTTCCCTTGTCAT 59.681 43.478 18.03 0.00 36.00 3.06
2306 2390 3.569701 ACATGTGTTGTTCCCTTGTCATC 59.430 43.478 0.00 0.00 33.74 2.92
2307 2391 3.289407 TGTGTTGTTCCCTTGTCATCA 57.711 42.857 0.00 0.00 0.00 3.07
2308 2392 3.213506 TGTGTTGTTCCCTTGTCATCAG 58.786 45.455 0.00 0.00 0.00 2.90
2309 2393 3.214328 GTGTTGTTCCCTTGTCATCAGT 58.786 45.455 0.00 0.00 0.00 3.41
2310 2394 3.003689 GTGTTGTTCCCTTGTCATCAGTG 59.996 47.826 0.00 0.00 0.00 3.66
2311 2395 3.118075 TGTTGTTCCCTTGTCATCAGTGA 60.118 43.478 0.00 0.00 0.00 3.41
2312 2396 3.407424 TGTTCCCTTGTCATCAGTGAG 57.593 47.619 0.00 0.00 34.36 3.51
2313 2397 2.079925 GTTCCCTTGTCATCAGTGAGC 58.920 52.381 0.00 0.00 34.36 4.26
2314 2398 1.649321 TCCCTTGTCATCAGTGAGCT 58.351 50.000 0.00 0.00 34.36 4.09
2315 2399 1.552337 TCCCTTGTCATCAGTGAGCTC 59.448 52.381 6.82 6.82 34.36 4.09
2316 2400 1.406614 CCCTTGTCATCAGTGAGCTCC 60.407 57.143 12.15 2.40 34.36 4.70
2317 2401 1.277273 CCTTGTCATCAGTGAGCTCCA 59.723 52.381 12.15 0.00 34.36 3.86
2318 2402 2.619147 CTTGTCATCAGTGAGCTCCAG 58.381 52.381 12.15 0.67 34.36 3.86
2319 2403 1.928868 TGTCATCAGTGAGCTCCAGA 58.071 50.000 12.15 6.79 34.36 3.86
2320 2404 2.250924 TGTCATCAGTGAGCTCCAGAA 58.749 47.619 12.15 0.00 34.36 3.02
2321 2405 2.634453 TGTCATCAGTGAGCTCCAGAAA 59.366 45.455 12.15 0.00 34.36 2.52
2322 2406 3.071457 TGTCATCAGTGAGCTCCAGAAAA 59.929 43.478 12.15 0.00 34.36 2.29
2323 2407 3.434984 GTCATCAGTGAGCTCCAGAAAAC 59.565 47.826 12.15 0.88 34.36 2.43
2324 2408 3.071457 TCATCAGTGAGCTCCAGAAAACA 59.929 43.478 12.15 0.00 0.00 2.83
2325 2409 2.838736 TCAGTGAGCTCCAGAAAACAC 58.161 47.619 12.15 0.01 0.00 3.32
2326 2410 2.170397 TCAGTGAGCTCCAGAAAACACA 59.830 45.455 12.15 0.00 0.00 3.72
2327 2411 2.945008 CAGTGAGCTCCAGAAAACACAA 59.055 45.455 12.15 0.00 0.00 3.33
2328 2412 2.945668 AGTGAGCTCCAGAAAACACAAC 59.054 45.455 12.15 0.00 0.00 3.32
2329 2413 2.945668 GTGAGCTCCAGAAAACACAACT 59.054 45.455 12.15 0.00 0.00 3.16
2330 2414 2.945008 TGAGCTCCAGAAAACACAACTG 59.055 45.455 12.15 0.00 0.00 3.16
2331 2415 1.678101 AGCTCCAGAAAACACAACTGC 59.322 47.619 0.00 0.00 0.00 4.40
2332 2416 1.405105 GCTCCAGAAAACACAACTGCA 59.595 47.619 0.00 0.00 0.00 4.41
2333 2417 2.159254 GCTCCAGAAAACACAACTGCAA 60.159 45.455 0.00 0.00 0.00 4.08
2334 2418 3.699067 CTCCAGAAAACACAACTGCAAG 58.301 45.455 0.00 0.00 42.29 4.01
2335 2419 2.426738 TCCAGAAAACACAACTGCAAGG 59.573 45.455 0.00 0.00 39.30 3.61
2336 2420 2.166254 CCAGAAAACACAACTGCAAGGT 59.834 45.455 0.00 0.00 39.30 3.50
2337 2421 3.380004 CCAGAAAACACAACTGCAAGGTA 59.620 43.478 0.00 0.00 39.30 3.08
2338 2422 4.351192 CAGAAAACACAACTGCAAGGTAC 58.649 43.478 0.00 0.00 39.30 3.34
2339 2423 4.013728 AGAAAACACAACTGCAAGGTACA 58.986 39.130 0.00 0.00 39.30 2.90
2340 2424 4.096382 AGAAAACACAACTGCAAGGTACAG 59.904 41.667 0.00 0.00 39.30 2.74
2341 2425 3.275617 AACACAACTGCAAGGTACAGA 57.724 42.857 0.00 0.00 39.30 3.41
2342 2426 3.275617 ACACAACTGCAAGGTACAGAA 57.724 42.857 0.00 0.00 39.30 3.02
2343 2427 3.820557 ACACAACTGCAAGGTACAGAAT 58.179 40.909 0.00 0.00 39.30 2.40
2344 2428 4.968259 ACACAACTGCAAGGTACAGAATA 58.032 39.130 0.00 0.00 39.30 1.75
2345 2429 4.997395 ACACAACTGCAAGGTACAGAATAG 59.003 41.667 0.00 0.00 39.30 1.73
2346 2430 4.997395 CACAACTGCAAGGTACAGAATAGT 59.003 41.667 0.00 0.00 39.30 2.12
2347 2431 5.470098 CACAACTGCAAGGTACAGAATAGTT 59.530 40.000 0.00 0.00 39.30 2.24
2348 2432 5.470098 ACAACTGCAAGGTACAGAATAGTTG 59.530 40.000 20.44 20.44 45.45 3.16
2349 2433 4.003648 ACTGCAAGGTACAGAATAGTTGC 58.996 43.478 0.00 0.00 39.30 4.17
2350 2434 3.343617 TGCAAGGTACAGAATAGTTGCC 58.656 45.455 0.00 0.00 39.62 4.52
2351 2435 3.244735 TGCAAGGTACAGAATAGTTGCCA 60.245 43.478 0.00 0.00 39.62 4.92
2352 2436 3.127030 GCAAGGTACAGAATAGTTGCCAC 59.873 47.826 0.00 0.00 35.36 5.01
2353 2437 4.579869 CAAGGTACAGAATAGTTGCCACT 58.420 43.478 0.00 0.00 36.99 4.00
2354 2438 4.910458 AGGTACAGAATAGTTGCCACTT 57.090 40.909 0.00 0.00 34.06 3.16
2355 2439 6.170506 CAAGGTACAGAATAGTTGCCACTTA 58.829 40.000 0.00 0.00 34.06 2.24
2356 2440 5.978814 AGGTACAGAATAGTTGCCACTTAG 58.021 41.667 0.00 0.00 34.06 2.18
2357 2441 5.484290 AGGTACAGAATAGTTGCCACTTAGT 59.516 40.000 0.00 0.00 34.06 2.24
2358 2442 6.013639 AGGTACAGAATAGTTGCCACTTAGTT 60.014 38.462 0.00 0.00 34.06 2.24
2359 2443 6.653740 GGTACAGAATAGTTGCCACTTAGTTT 59.346 38.462 0.00 0.00 34.06 2.66
2360 2444 6.560253 ACAGAATAGTTGCCACTTAGTTTG 57.440 37.500 0.00 0.00 34.06 2.93
2361 2445 5.473504 ACAGAATAGTTGCCACTTAGTTTGG 59.526 40.000 0.00 0.00 37.17 3.28
2362 2446 5.705441 CAGAATAGTTGCCACTTAGTTTGGA 59.295 40.000 0.00 0.00 36.02 3.53
2363 2447 6.375455 CAGAATAGTTGCCACTTAGTTTGGAT 59.625 38.462 0.00 0.00 36.02 3.41
2364 2448 6.948309 AGAATAGTTGCCACTTAGTTTGGATT 59.052 34.615 0.00 0.00 36.02 3.01
2365 2449 7.451566 AGAATAGTTGCCACTTAGTTTGGATTT 59.548 33.333 0.00 0.00 36.02 2.17
2366 2450 5.869649 AGTTGCCACTTAGTTTGGATTTT 57.130 34.783 0.00 0.00 36.02 1.82
2367 2451 6.969993 AGTTGCCACTTAGTTTGGATTTTA 57.030 33.333 0.00 0.00 36.02 1.52
2368 2452 6.981722 AGTTGCCACTTAGTTTGGATTTTAG 58.018 36.000 0.00 0.00 36.02 1.85
2369 2453 6.549736 AGTTGCCACTTAGTTTGGATTTTAGT 59.450 34.615 0.00 0.00 36.02 2.24
2370 2454 6.969993 TGCCACTTAGTTTGGATTTTAGTT 57.030 33.333 0.00 0.00 36.02 2.24
2371 2455 8.354426 GTTGCCACTTAGTTTGGATTTTAGTTA 58.646 33.333 0.00 0.00 36.02 2.24
2372 2456 8.466617 TGCCACTTAGTTTGGATTTTAGTTAA 57.533 30.769 0.00 0.00 36.02 2.01
2373 2457 8.915036 TGCCACTTAGTTTGGATTTTAGTTAAA 58.085 29.630 0.00 0.00 36.02 1.52
2374 2458 9.752961 GCCACTTAGTTTGGATTTTAGTTAAAA 57.247 29.630 0.02 0.02 36.02 1.52
2406 2490 9.517609 GACATGTTAGTAACACTATAGAGTTGG 57.482 37.037 21.48 6.90 45.50 3.77
2407 2491 9.251440 ACATGTTAGTAACACTATAGAGTTGGA 57.749 33.333 21.48 4.07 45.50 3.53
2408 2492 9.517609 CATGTTAGTAACACTATAGAGTTGGAC 57.482 37.037 21.48 14.22 45.50 4.02
2409 2493 8.640063 TGTTAGTAACACTATAGAGTTGGACA 57.360 34.615 21.48 16.68 36.25 4.02
2410 2494 9.081204 TGTTAGTAACACTATAGAGTTGGACAA 57.919 33.333 21.48 10.01 36.25 3.18
2422 2506 6.727824 AGAGTTGGACAATAAATGAAGTCG 57.272 37.500 0.00 0.00 31.93 4.18
2423 2507 6.464222 AGAGTTGGACAATAAATGAAGTCGA 58.536 36.000 0.00 0.00 31.93 4.20
2424 2508 6.369065 AGAGTTGGACAATAAATGAAGTCGAC 59.631 38.462 7.70 7.70 31.93 4.20
2425 2509 6.231211 AGTTGGACAATAAATGAAGTCGACT 58.769 36.000 13.58 13.58 31.93 4.18
2426 2510 7.383687 AGTTGGACAATAAATGAAGTCGACTA 58.616 34.615 20.39 4.13 31.09 2.59
2427 2511 7.331193 AGTTGGACAATAAATGAAGTCGACTAC 59.669 37.037 20.39 7.17 31.09 2.73
2428 2512 6.693466 TGGACAATAAATGAAGTCGACTACA 58.307 36.000 20.39 0.00 31.93 2.74
2429 2513 7.327975 TGGACAATAAATGAAGTCGACTACAT 58.672 34.615 20.39 2.53 31.93 2.29
2430 2514 7.491372 TGGACAATAAATGAAGTCGACTACATC 59.509 37.037 20.39 13.59 31.93 3.06
2431 2515 7.042658 GGACAATAAATGAAGTCGACTACATCC 60.043 40.741 20.39 10.10 31.93 3.51
2432 2516 6.475727 ACAATAAATGAAGTCGACTACATCCG 59.524 38.462 20.39 4.97 0.00 4.18
2433 2517 4.713824 AAATGAAGTCGACTACATCCGA 57.286 40.909 20.39 0.00 0.00 4.55
2434 2518 4.713824 AATGAAGTCGACTACATCCGAA 57.286 40.909 20.39 0.00 36.50 4.30
2435 2519 3.482722 TGAAGTCGACTACATCCGAAC 57.517 47.619 20.39 3.12 36.50 3.95
2436 2520 2.159612 TGAAGTCGACTACATCCGAACG 60.160 50.000 20.39 0.00 36.50 3.95
2437 2521 1.730501 AGTCGACTACATCCGAACGA 58.269 50.000 18.46 0.00 36.50 3.85
2438 2522 2.079158 AGTCGACTACATCCGAACGAA 58.921 47.619 18.46 0.00 36.50 3.85
2439 2523 2.159599 AGTCGACTACATCCGAACGAAC 60.160 50.000 18.46 0.00 36.50 3.95
2440 2524 2.079158 TCGACTACATCCGAACGAACT 58.921 47.619 0.00 0.00 0.00 3.01
2441 2525 2.485426 TCGACTACATCCGAACGAACTT 59.515 45.455 0.00 0.00 0.00 2.66
2442 2526 3.684305 TCGACTACATCCGAACGAACTTA 59.316 43.478 0.00 0.00 0.00 2.24
2443 2527 4.333649 TCGACTACATCCGAACGAACTTAT 59.666 41.667 0.00 0.00 0.00 1.73
2444 2528 4.669728 CGACTACATCCGAACGAACTTATC 59.330 45.833 0.00 0.00 0.00 1.75
2445 2529 5.503683 CGACTACATCCGAACGAACTTATCT 60.504 44.000 0.00 0.00 0.00 1.98
2446 2530 6.205101 ACTACATCCGAACGAACTTATCTT 57.795 37.500 0.00 0.00 0.00 2.40
2447 2531 6.034591 ACTACATCCGAACGAACTTATCTTG 58.965 40.000 0.00 0.00 0.00 3.02
2448 2532 3.617263 ACATCCGAACGAACTTATCTTGC 59.383 43.478 0.00 0.00 0.00 4.01
2449 2533 3.587797 TCCGAACGAACTTATCTTGCT 57.412 42.857 0.00 0.00 0.00 3.91
2450 2534 3.921677 TCCGAACGAACTTATCTTGCTT 58.078 40.909 0.00 0.00 0.00 3.91
2451 2535 3.924686 TCCGAACGAACTTATCTTGCTTC 59.075 43.478 0.00 0.00 0.00 3.86
2452 2536 3.062234 CCGAACGAACTTATCTTGCTTCC 59.938 47.826 0.00 0.00 0.00 3.46
2453 2537 3.678072 CGAACGAACTTATCTTGCTTCCA 59.322 43.478 0.00 0.00 0.00 3.53
2454 2538 4.151689 CGAACGAACTTATCTTGCTTCCAA 59.848 41.667 0.00 0.00 0.00 3.53
2469 2553 7.765695 TTGCTTCCAAGAAGAGTAAAATCAT 57.234 32.000 8.50 0.00 0.00 2.45
2470 2554 7.383102 TGCTTCCAAGAAGAGTAAAATCATC 57.617 36.000 8.50 0.00 0.00 2.92
2471 2555 7.170965 TGCTTCCAAGAAGAGTAAAATCATCT 58.829 34.615 8.50 0.00 0.00 2.90
2472 2556 7.667219 TGCTTCCAAGAAGAGTAAAATCATCTT 59.333 33.333 8.50 0.00 37.65 2.40
2473 2557 8.518702 GCTTCCAAGAAGAGTAAAATCATCTTT 58.481 33.333 8.50 0.00 35.62 2.52
2493 2577 9.977762 CATCTTTAATAATTTCCTGCTTTTTGC 57.022 29.630 0.00 0.00 43.25 3.68
2494 2578 9.948964 ATCTTTAATAATTTCCTGCTTTTTGCT 57.051 25.926 0.00 0.00 43.37 3.91
2495 2579 9.777297 TCTTTAATAATTTCCTGCTTTTTGCTT 57.223 25.926 0.00 0.00 43.37 3.91
2503 2587 9.895138 AATTTCCTGCTTTTTGCTTATATTCAT 57.105 25.926 0.00 0.00 43.37 2.57
2504 2588 8.706492 TTTCCTGCTTTTTGCTTATATTCATG 57.294 30.769 0.00 0.00 43.37 3.07
2505 2589 7.408756 TCCTGCTTTTTGCTTATATTCATGT 57.591 32.000 0.00 0.00 43.37 3.21
2506 2590 7.839907 TCCTGCTTTTTGCTTATATTCATGTT 58.160 30.769 0.00 0.00 43.37 2.71
2507 2591 8.313292 TCCTGCTTTTTGCTTATATTCATGTTT 58.687 29.630 0.00 0.00 43.37 2.83
2508 2592 8.598075 CCTGCTTTTTGCTTATATTCATGTTTC 58.402 33.333 0.00 0.00 43.37 2.78
2509 2593 9.362539 CTGCTTTTTGCTTATATTCATGTTTCT 57.637 29.630 0.00 0.00 43.37 2.52
2510 2594 9.709495 TGCTTTTTGCTTATATTCATGTTTCTT 57.291 25.926 0.00 0.00 43.37 2.52
2528 2612 6.915300 TGTTTCTTAACATGTTTGGAATGTCG 59.085 34.615 17.78 0.00 39.29 4.35
2529 2613 6.627395 TTCTTAACATGTTTGGAATGTCGT 57.373 33.333 17.78 0.00 37.27 4.34
2530 2614 6.627395 TCTTAACATGTTTGGAATGTCGTT 57.373 33.333 17.78 0.00 37.27 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.579850 TGTGAGCTTATTATCACCAGAATTTT 57.420 30.769 3.12 0.00 44.19 1.82
1 2 8.757982 ATGTGAGCTTATTATCACCAGAATTT 57.242 30.769 3.12 0.00 44.19 1.82
2 3 8.627403 CAATGTGAGCTTATTATCACCAGAATT 58.373 33.333 3.12 0.00 44.19 2.17
3 4 7.230108 CCAATGTGAGCTTATTATCACCAGAAT 59.770 37.037 3.12 0.00 44.19 2.40
4 5 6.543465 CCAATGTGAGCTTATTATCACCAGAA 59.457 38.462 3.12 0.00 44.19 3.02
8 9 6.712095 TGATCCAATGTGAGCTTATTATCACC 59.288 38.462 3.12 0.00 44.19 4.02
9 10 7.734924 TGATCCAATGTGAGCTTATTATCAC 57.265 36.000 0.00 0.00 44.88 3.06
10 11 9.662947 CTATGATCCAATGTGAGCTTATTATCA 57.337 33.333 0.00 0.00 0.00 2.15
11 12 9.881649 TCTATGATCCAATGTGAGCTTATTATC 57.118 33.333 0.00 0.00 0.00 1.75
12 13 9.887629 CTCTATGATCCAATGTGAGCTTATTAT 57.112 33.333 0.00 0.00 0.00 1.28
13 14 8.874156 ACTCTATGATCCAATGTGAGCTTATTA 58.126 33.333 0.00 0.00 0.00 0.98
14 15 7.743749 ACTCTATGATCCAATGTGAGCTTATT 58.256 34.615 0.00 0.00 0.00 1.40
15 16 7.313740 ACTCTATGATCCAATGTGAGCTTAT 57.686 36.000 0.00 0.00 0.00 1.73
16 17 6.737720 ACTCTATGATCCAATGTGAGCTTA 57.262 37.500 0.00 0.00 0.00 3.09
17 18 5.627182 ACTCTATGATCCAATGTGAGCTT 57.373 39.130 0.00 0.00 0.00 3.74
18 19 6.931790 ATACTCTATGATCCAATGTGAGCT 57.068 37.500 0.00 0.00 0.00 4.09
19 20 9.664332 AATTATACTCTATGATCCAATGTGAGC 57.336 33.333 0.00 0.00 0.00 4.26
23 24 9.658799 CCGAAATTATACTCTATGATCCAATGT 57.341 33.333 0.00 0.00 0.00 2.71
24 25 8.607459 GCCGAAATTATACTCTATGATCCAATG 58.393 37.037 0.00 0.00 0.00 2.82
25 26 8.543774 AGCCGAAATTATACTCTATGATCCAAT 58.456 33.333 0.00 0.00 0.00 3.16
26 27 7.819415 CAGCCGAAATTATACTCTATGATCCAA 59.181 37.037 0.00 0.00 0.00 3.53
27 28 7.178451 TCAGCCGAAATTATACTCTATGATCCA 59.822 37.037 0.00 0.00 0.00 3.41
28 29 7.548097 TCAGCCGAAATTATACTCTATGATCC 58.452 38.462 0.00 0.00 0.00 3.36
29 30 8.988064 TTCAGCCGAAATTATACTCTATGATC 57.012 34.615 0.00 0.00 0.00 2.92
44 45 4.920640 TTGGTGTTAATTTCAGCCGAAA 57.079 36.364 0.00 0.00 44.99 3.46
45 46 4.794655 GCTTTGGTGTTAATTTCAGCCGAA 60.795 41.667 9.05 0.00 33.13 4.30
46 47 3.305064 GCTTTGGTGTTAATTTCAGCCGA 60.305 43.478 9.05 0.00 33.13 5.54
47 48 2.986479 GCTTTGGTGTTAATTTCAGCCG 59.014 45.455 9.05 0.00 33.13 5.52
48 49 4.257267 AGCTTTGGTGTTAATTTCAGCC 57.743 40.909 9.05 0.00 33.13 4.85
49 50 5.532557 AGAAGCTTTGGTGTTAATTTCAGC 58.467 37.500 0.00 5.84 0.00 4.26
50 51 9.132521 CAATAGAAGCTTTGGTGTTAATTTCAG 57.867 33.333 0.00 0.00 0.00 3.02
51 52 7.598493 GCAATAGAAGCTTTGGTGTTAATTTCA 59.402 33.333 0.00 0.00 0.00 2.69
52 53 7.598493 TGCAATAGAAGCTTTGGTGTTAATTTC 59.402 33.333 0.00 0.00 0.00 2.17
53 54 7.441017 TGCAATAGAAGCTTTGGTGTTAATTT 58.559 30.769 0.00 0.00 0.00 1.82
54 55 6.991938 TGCAATAGAAGCTTTGGTGTTAATT 58.008 32.000 0.00 0.00 0.00 1.40
55 56 6.588719 TGCAATAGAAGCTTTGGTGTTAAT 57.411 33.333 0.00 0.00 0.00 1.40
56 57 6.398234 TTGCAATAGAAGCTTTGGTGTTAA 57.602 33.333 0.00 0.00 0.00 2.01
57 58 6.398234 TTTGCAATAGAAGCTTTGGTGTTA 57.602 33.333 0.00 0.00 0.00 2.41
58 59 4.935352 TTGCAATAGAAGCTTTGGTGTT 57.065 36.364 0.00 0.00 0.00 3.32
59 60 4.935352 TTTGCAATAGAAGCTTTGGTGT 57.065 36.364 0.00 0.00 0.00 4.16
94 95 9.613428 CTCAAGATTACCAACAAATAGTCCATA 57.387 33.333 0.00 0.00 0.00 2.74
95 96 8.109634 ACTCAAGATTACCAACAAATAGTCCAT 58.890 33.333 0.00 0.00 0.00 3.41
96 97 7.458397 ACTCAAGATTACCAACAAATAGTCCA 58.542 34.615 0.00 0.00 0.00 4.02
97 98 7.201530 CGACTCAAGATTACCAACAAATAGTCC 60.202 40.741 0.00 0.00 0.00 3.85
98 99 7.331193 ACGACTCAAGATTACCAACAAATAGTC 59.669 37.037 0.00 0.00 0.00 2.59
99 100 7.159372 ACGACTCAAGATTACCAACAAATAGT 58.841 34.615 0.00 0.00 0.00 2.12
100 101 7.545965 AGACGACTCAAGATTACCAACAAATAG 59.454 37.037 0.00 0.00 0.00 1.73
101 102 7.383687 AGACGACTCAAGATTACCAACAAATA 58.616 34.615 0.00 0.00 0.00 1.40
102 103 6.231211 AGACGACTCAAGATTACCAACAAAT 58.769 36.000 0.00 0.00 0.00 2.32
103 104 5.607477 AGACGACTCAAGATTACCAACAAA 58.393 37.500 0.00 0.00 0.00 2.83
104 105 5.209818 AGACGACTCAAGATTACCAACAA 57.790 39.130 0.00 0.00 0.00 2.83
105 106 4.866508 AGACGACTCAAGATTACCAACA 57.133 40.909 0.00 0.00 0.00 3.33
106 107 5.227908 TCAAGACGACTCAAGATTACCAAC 58.772 41.667 0.00 0.00 0.00 3.77
107 108 5.462530 TCAAGACGACTCAAGATTACCAA 57.537 39.130 0.00 0.00 0.00 3.67
108 109 5.010719 AGTTCAAGACGACTCAAGATTACCA 59.989 40.000 0.00 0.00 0.00 3.25
109 110 5.471257 AGTTCAAGACGACTCAAGATTACC 58.529 41.667 0.00 0.00 0.00 2.85
110 111 8.516811 TTAAGTTCAAGACGACTCAAGATTAC 57.483 34.615 0.00 0.00 0.00 1.89
111 112 9.706691 ATTTAAGTTCAAGACGACTCAAGATTA 57.293 29.630 0.00 0.00 0.00 1.75
112 113 8.608844 ATTTAAGTTCAAGACGACTCAAGATT 57.391 30.769 0.00 0.00 0.00 2.40
113 114 9.877178 ATATTTAAGTTCAAGACGACTCAAGAT 57.123 29.630 0.00 0.00 0.00 2.40
114 115 9.706691 AATATTTAAGTTCAAGACGACTCAAGA 57.293 29.630 0.00 0.00 0.00 3.02
115 116 9.746711 CAATATTTAAGTTCAAGACGACTCAAG 57.253 33.333 0.00 0.00 0.00 3.02
116 117 8.717821 CCAATATTTAAGTTCAAGACGACTCAA 58.282 33.333 0.00 0.00 0.00 3.02
117 118 7.148474 GCCAATATTTAAGTTCAAGACGACTCA 60.148 37.037 0.00 0.00 0.00 3.41
118 119 7.064728 AGCCAATATTTAAGTTCAAGACGACTC 59.935 37.037 0.00 0.00 0.00 3.36
119 120 6.879458 AGCCAATATTTAAGTTCAAGACGACT 59.121 34.615 0.00 0.00 0.00 4.18
120 121 7.073342 AGCCAATATTTAAGTTCAAGACGAC 57.927 36.000 0.00 0.00 0.00 4.34
121 122 7.681939 AAGCCAATATTTAAGTTCAAGACGA 57.318 32.000 0.00 0.00 0.00 4.20
122 123 9.274065 GTAAAGCCAATATTTAAGTTCAAGACG 57.726 33.333 0.00 0.00 0.00 4.18
134 135 9.914131 GAAAGTCTTCTTGTAAAGCCAATATTT 57.086 29.630 0.00 0.00 45.70 1.40
135 136 9.301897 AGAAAGTCTTCTTGTAAAGCCAATATT 57.698 29.630 0.00 0.00 45.70 1.28
136 137 8.870075 AGAAAGTCTTCTTGTAAAGCCAATAT 57.130 30.769 0.00 0.00 45.70 1.28
174 175 9.466497 TGGTTTCTAAAATTCTTGCTCATCTAT 57.534 29.630 0.00 0.00 0.00 1.98
175 176 8.862325 TGGTTTCTAAAATTCTTGCTCATCTA 57.138 30.769 0.00 0.00 0.00 1.98
176 177 7.765695 TGGTTTCTAAAATTCTTGCTCATCT 57.234 32.000 0.00 0.00 0.00 2.90
177 178 8.866956 CATTGGTTTCTAAAATTCTTGCTCATC 58.133 33.333 0.00 0.00 0.00 2.92
178 179 8.370182 ACATTGGTTTCTAAAATTCTTGCTCAT 58.630 29.630 0.00 0.00 0.00 2.90
179 180 7.725251 ACATTGGTTTCTAAAATTCTTGCTCA 58.275 30.769 0.00 0.00 0.00 4.26
180 181 8.593492 AACATTGGTTTCTAAAATTCTTGCTC 57.407 30.769 0.00 0.00 31.83 4.26
181 182 7.657354 GGAACATTGGTTTCTAAAATTCTTGCT 59.343 33.333 0.00 0.00 37.36 3.91
182 183 7.440856 TGGAACATTGGTTTCTAAAATTCTTGC 59.559 33.333 0.00 0.00 37.36 4.01
183 184 8.885494 TGGAACATTGGTTTCTAAAATTCTTG 57.115 30.769 0.00 0.00 37.36 3.02
200 201 7.810759 GTTACGTGGATAACAAAATGGAACATT 59.189 33.333 0.00 0.00 37.83 2.71
201 202 7.309920 GTTACGTGGATAACAAAATGGAACAT 58.690 34.615 0.00 0.00 37.83 2.71
202 203 6.566187 CGTTACGTGGATAACAAAATGGAACA 60.566 38.462 0.00 0.00 37.58 3.18
203 204 5.791480 CGTTACGTGGATAACAAAATGGAAC 59.209 40.000 0.00 0.00 35.18 3.62
204 205 5.469421 ACGTTACGTGGATAACAAAATGGAA 59.531 36.000 10.39 0.00 39.18 3.53
205 206 4.996122 ACGTTACGTGGATAACAAAATGGA 59.004 37.500 10.39 0.00 39.18 3.41
206 207 5.285798 ACGTTACGTGGATAACAAAATGG 57.714 39.130 10.39 0.00 39.18 3.16
207 208 8.169910 TGATTACGTTACGTGGATAACAAAATG 58.830 33.333 21.22 0.00 41.39 2.32
208 209 8.254178 TGATTACGTTACGTGGATAACAAAAT 57.746 30.769 21.22 8.46 41.39 1.82
209 210 7.649370 TGATTACGTTACGTGGATAACAAAA 57.351 32.000 21.22 3.51 41.39 2.44
210 211 7.760794 AGATGATTACGTTACGTGGATAACAAA 59.239 33.333 21.22 4.27 41.39 2.83
211 212 7.221259 CAGATGATTACGTTACGTGGATAACAA 59.779 37.037 21.22 5.04 41.39 2.83
212 213 6.693978 CAGATGATTACGTTACGTGGATAACA 59.306 38.462 21.22 11.52 41.39 2.41
213 214 6.694411 ACAGATGATTACGTTACGTGGATAAC 59.306 38.462 21.22 8.03 41.39 1.89
214 215 6.798482 ACAGATGATTACGTTACGTGGATAA 58.202 36.000 21.22 6.98 41.39 1.75
215 216 6.381481 ACAGATGATTACGTTACGTGGATA 57.619 37.500 21.22 5.01 41.39 2.59
216 217 5.258456 ACAGATGATTACGTTACGTGGAT 57.742 39.130 21.22 13.80 41.39 3.41
217 218 4.707030 ACAGATGATTACGTTACGTGGA 57.293 40.909 21.22 9.37 41.39 4.02
218 219 4.860352 TGAACAGATGATTACGTTACGTGG 59.140 41.667 21.22 2.48 41.39 4.94
219 220 6.384178 TTGAACAGATGATTACGTTACGTG 57.616 37.500 21.22 3.40 41.39 4.49
220 221 7.329962 TGAATTGAACAGATGATTACGTTACGT 59.670 33.333 16.31 16.31 44.35 3.57
221 222 7.671827 TGAATTGAACAGATGATTACGTTACG 58.328 34.615 2.19 2.19 0.00 3.18
222 223 9.988350 AATGAATTGAACAGATGATTACGTTAC 57.012 29.630 0.00 0.00 0.00 2.50
224 225 9.559958 GAAATGAATTGAACAGATGATTACGTT 57.440 29.630 0.00 0.00 0.00 3.99
225 226 8.184192 GGAAATGAATTGAACAGATGATTACGT 58.816 33.333 0.00 0.00 0.00 3.57
226 227 7.645340 GGGAAATGAATTGAACAGATGATTACG 59.355 37.037 0.00 0.00 0.00 3.18
227 228 8.469200 TGGGAAATGAATTGAACAGATGATTAC 58.531 33.333 0.00 0.00 0.00 1.89
228 229 8.592529 TGGGAAATGAATTGAACAGATGATTA 57.407 30.769 0.00 0.00 0.00 1.75
229 230 7.484993 TGGGAAATGAATTGAACAGATGATT 57.515 32.000 0.00 0.00 0.00 2.57
230 231 7.418597 CCATGGGAAATGAATTGAACAGATGAT 60.419 37.037 2.85 0.00 0.00 2.45
231 232 6.127281 CCATGGGAAATGAATTGAACAGATGA 60.127 38.462 2.85 0.00 0.00 2.92
232 233 6.046593 CCATGGGAAATGAATTGAACAGATG 58.953 40.000 2.85 0.00 0.00 2.90
233 234 5.395990 GCCATGGGAAATGAATTGAACAGAT 60.396 40.000 15.13 0.00 0.00 2.90
234 235 4.081531 GCCATGGGAAATGAATTGAACAGA 60.082 41.667 15.13 0.00 0.00 3.41
235 236 4.186159 GCCATGGGAAATGAATTGAACAG 58.814 43.478 15.13 0.00 0.00 3.16
236 237 3.581770 TGCCATGGGAAATGAATTGAACA 59.418 39.130 15.13 0.00 0.00 3.18
237 238 4.205065 TGCCATGGGAAATGAATTGAAC 57.795 40.909 15.13 0.00 0.00 3.18
238 239 4.577875 GTTGCCATGGGAAATGAATTGAA 58.422 39.130 21.44 0.00 0.00 2.69
239 240 3.368220 CGTTGCCATGGGAAATGAATTGA 60.368 43.478 21.44 0.00 28.72 2.57
240 241 2.931325 CGTTGCCATGGGAAATGAATTG 59.069 45.455 21.44 1.26 28.72 2.32
241 242 2.677613 GCGTTGCCATGGGAAATGAATT 60.678 45.455 21.44 0.00 28.72 2.17
242 243 1.134729 GCGTTGCCATGGGAAATGAAT 60.135 47.619 21.44 0.00 28.72 2.57
243 244 0.246086 GCGTTGCCATGGGAAATGAA 59.754 50.000 21.44 0.00 28.72 2.57
244 245 0.897401 TGCGTTGCCATGGGAAATGA 60.897 50.000 21.44 4.11 28.72 2.57
245 246 0.176219 ATGCGTTGCCATGGGAAATG 59.824 50.000 21.44 16.70 30.55 2.32
246 247 0.903942 AATGCGTTGCCATGGGAAAT 59.096 45.000 21.44 8.08 0.00 2.17
247 248 0.683973 AAATGCGTTGCCATGGGAAA 59.316 45.000 21.44 5.72 0.00 3.13
248 249 0.683973 AAAATGCGTTGCCATGGGAA 59.316 45.000 15.64 15.64 0.00 3.97
249 250 0.683973 AAAAATGCGTTGCCATGGGA 59.316 45.000 15.13 8.24 0.00 4.37
250 251 2.376808 TAAAAATGCGTTGCCATGGG 57.623 45.000 15.13 0.00 0.00 4.00
251 252 5.288015 TCATATAAAAATGCGTTGCCATGG 58.712 37.500 7.63 7.63 0.00 3.66
252 253 6.825284 TTCATATAAAAATGCGTTGCCATG 57.175 33.333 0.00 0.00 0.00 3.66
253 254 9.709495 ATATTTCATATAAAAATGCGTTGCCAT 57.291 25.926 0.00 0.00 0.00 4.40
254 255 9.539825 AATATTTCATATAAAAATGCGTTGCCA 57.460 25.926 0.00 0.00 0.00 4.92
336 337 9.703892 TTGATGGTTCATTTTTCGTCATATTTT 57.296 25.926 0.00 0.00 0.00 1.82
337 338 9.357652 CTTGATGGTTCATTTTTCGTCATATTT 57.642 29.630 0.00 0.00 0.00 1.40
338 339 8.522830 ACTTGATGGTTCATTTTTCGTCATATT 58.477 29.630 0.00 0.00 0.00 1.28
339 340 8.055279 ACTTGATGGTTCATTTTTCGTCATAT 57.945 30.769 0.00 0.00 0.00 1.78
340 341 7.447374 ACTTGATGGTTCATTTTTCGTCATA 57.553 32.000 0.00 0.00 0.00 2.15
341 342 6.331369 ACTTGATGGTTCATTTTTCGTCAT 57.669 33.333 0.00 0.00 0.00 3.06
342 343 5.766150 ACTTGATGGTTCATTTTTCGTCA 57.234 34.783 0.00 0.00 0.00 4.35
343 344 6.072673 ACCTACTTGATGGTTCATTTTTCGTC 60.073 38.462 0.00 0.00 31.62 4.20
344 345 5.768164 ACCTACTTGATGGTTCATTTTTCGT 59.232 36.000 0.00 0.00 31.62 3.85
345 346 6.254281 ACCTACTTGATGGTTCATTTTTCG 57.746 37.500 0.00 0.00 31.62 3.46
355 356 4.426704 AGTGGTAGAACCTACTTGATGGT 58.573 43.478 4.40 0.00 39.58 3.55
356 357 5.422214 AAGTGGTAGAACCTACTTGATGG 57.578 43.478 10.91 0.00 37.83 3.51
357 358 9.099454 GATAAAAGTGGTAGAACCTACTTGATG 57.901 37.037 11.87 0.00 38.60 3.07
358 359 7.980099 CGATAAAAGTGGTAGAACCTACTTGAT 59.020 37.037 11.87 9.62 38.60 2.57
359 360 7.318141 CGATAAAAGTGGTAGAACCTACTTGA 58.682 38.462 11.87 6.67 38.60 3.02
360 361 6.035758 GCGATAAAAGTGGTAGAACCTACTTG 59.964 42.308 11.87 4.38 38.60 3.16
361 362 6.104665 GCGATAAAAGTGGTAGAACCTACTT 58.895 40.000 4.40 3.48 39.53 2.24
362 363 5.394993 GGCGATAAAAGTGGTAGAACCTACT 60.395 44.000 4.40 0.00 39.58 2.57
363 364 4.807834 GGCGATAAAAGTGGTAGAACCTAC 59.192 45.833 0.00 0.00 39.58 3.18
364 365 4.141869 GGGCGATAAAAGTGGTAGAACCTA 60.142 45.833 0.00 0.00 39.58 3.08
365 366 3.370209 GGGCGATAAAAGTGGTAGAACCT 60.370 47.826 0.00 0.00 39.58 3.50
366 367 2.941064 GGGCGATAAAAGTGGTAGAACC 59.059 50.000 0.00 0.00 39.22 3.62
367 368 2.606272 CGGGCGATAAAAGTGGTAGAAC 59.394 50.000 0.00 0.00 0.00 3.01
368 369 2.419021 CCGGGCGATAAAAGTGGTAGAA 60.419 50.000 0.00 0.00 0.00 2.10
369 370 1.137479 CCGGGCGATAAAAGTGGTAGA 59.863 52.381 0.00 0.00 0.00 2.59
370 371 1.134610 ACCGGGCGATAAAAGTGGTAG 60.135 52.381 6.32 0.00 0.00 3.18
371 372 0.903942 ACCGGGCGATAAAAGTGGTA 59.096 50.000 6.32 0.00 0.00 3.25
372 373 0.675522 CACCGGGCGATAAAAGTGGT 60.676 55.000 6.32 0.00 0.00 4.16
373 374 1.988834 GCACCGGGCGATAAAAGTGG 61.989 60.000 6.32 0.00 0.00 4.00
374 375 1.427819 GCACCGGGCGATAAAAGTG 59.572 57.895 6.32 0.00 0.00 3.16
375 376 3.899395 GCACCGGGCGATAAAAGT 58.101 55.556 6.32 0.00 0.00 2.66
410 411 9.998106 ATCAATCCGTGCTTTATTATTACTAGT 57.002 29.630 0.00 0.00 0.00 2.57
436 444 3.755112 TGTGACGGTGAACCTATGAAA 57.245 42.857 0.00 0.00 0.00 2.69
438 446 3.973206 ATTGTGACGGTGAACCTATGA 57.027 42.857 0.00 0.00 0.00 2.15
440 448 3.777478 CGTATTGTGACGGTGAACCTAT 58.223 45.455 0.00 0.00 39.19 2.57
442 450 1.938016 GCGTATTGTGACGGTGAACCT 60.938 52.381 0.00 0.00 43.13 3.50
462 470 5.613358 AGCGTAAAATCACAGGAAAGAAG 57.387 39.130 0.00 0.00 0.00 2.85
465 473 5.757886 TGAAAGCGTAAAATCACAGGAAAG 58.242 37.500 0.00 0.00 0.00 2.62
467 475 4.819630 ACTGAAAGCGTAAAATCACAGGAA 59.180 37.500 0.00 0.00 37.60 3.36
469 477 4.749245 ACTGAAAGCGTAAAATCACAGG 57.251 40.909 0.00 0.00 37.60 4.00
470 478 6.198687 TCAAACTGAAAGCGTAAAATCACAG 58.801 36.000 0.00 0.00 37.60 3.66
476 485 8.809478 GGTTAAATTCAAACTGAAAGCGTAAAA 58.191 29.630 0.00 0.00 40.12 1.52
501 510 7.480810 GCAGATTAAATTTAGTACCACCTTGG 58.519 38.462 0.00 0.00 45.02 3.61
512 528 7.252865 CCGTTTTTCGTCGCAGATTAAATTTAG 60.253 37.037 0.00 0.00 40.67 1.85
523 539 0.716926 CGAACCGTTTTTCGTCGCAG 60.717 55.000 3.59 0.00 42.78 5.18
593 611 0.917333 TAGGGGGATTTGGTTCGGCT 60.917 55.000 0.00 0.00 0.00 5.52
710 731 1.486726 CCTCGGCTAAAGTGGAATCCT 59.513 52.381 0.00 0.00 0.00 3.24
780 804 1.445942 GCCTATGCCTACGCCTTCA 59.554 57.895 0.00 0.00 0.00 3.02
781 805 1.664965 CGCCTATGCCTACGCCTTC 60.665 63.158 0.00 0.00 0.00 3.46
782 806 2.421739 CGCCTATGCCTACGCCTT 59.578 61.111 0.00 0.00 0.00 4.35
783 807 4.301027 GCGCCTATGCCTACGCCT 62.301 66.667 0.00 0.00 45.35 5.52
868 907 1.984570 CTCCTTCTCCCTCACCGCA 60.985 63.158 0.00 0.00 0.00 5.69
897 937 1.106944 GCGCCTTCTCTAGCTCCTCT 61.107 60.000 0.00 0.00 0.00 3.69
1088 1128 7.504924 TCTACCAAACAGAATCGAAACAAAT 57.495 32.000 0.00 0.00 0.00 2.32
1173 1225 5.367937 ACTCAGCTATTCCAGTGGAACATAT 59.632 40.000 26.87 13.51 45.07 1.78
1174 1226 4.716784 ACTCAGCTATTCCAGTGGAACATA 59.283 41.667 26.87 14.98 45.07 2.29
1175 1227 3.521126 ACTCAGCTATTCCAGTGGAACAT 59.479 43.478 26.87 14.62 45.07 2.71
1176 1228 2.906389 ACTCAGCTATTCCAGTGGAACA 59.094 45.455 26.87 15.24 45.07 3.18
1197 1249 0.412244 TCTTTCTCTCCTCCCGGGAA 59.588 55.000 26.68 10.10 44.58 3.97
1282 1340 2.102925 CCAGACACATTTTTGCCAACCT 59.897 45.455 0.00 0.00 0.00 3.50
1318 1377 7.388776 AGTTCAGATTTGTCGATGAATTTGAGA 59.611 33.333 13.05 6.27 34.45 3.27
1340 1399 7.148787 CCAACGACTAATCAAAGTACAGAGTTC 60.149 40.741 0.00 0.00 0.00 3.01
1348 1407 5.375417 TCGTCCAACGACTAATCAAAGTA 57.625 39.130 0.00 0.00 46.73 2.24
1363 1422 5.193663 TCAAAATCAAGCATTTCGTCCAA 57.806 34.783 0.00 0.00 33.16 3.53
1417 1476 3.764434 TCCTCTAGTAGTGTTGAAGCCAG 59.236 47.826 0.00 0.00 0.00 4.85
1497 1556 0.171679 TTTCGATTGCTGCTGCCATG 59.828 50.000 13.47 3.46 38.71 3.66
1556 1615 2.633967 TCGTAGGCCTAAAAGTGTGGAA 59.366 45.455 15.83 0.00 0.00 3.53
1561 1620 5.873179 TTTCATTCGTAGGCCTAAAAGTG 57.127 39.130 15.83 12.38 0.00 3.16
1572 1631 7.721286 AGAAGCCATTAGATTTCATTCGTAG 57.279 36.000 0.00 0.00 0.00 3.51
1576 1635 8.992835 AACAAAGAAGCCATTAGATTTCATTC 57.007 30.769 0.00 0.00 0.00 2.67
1586 1645 4.662278 AGCAGGTAACAAAGAAGCCATTA 58.338 39.130 0.00 0.00 41.41 1.90
1595 1654 1.069227 GGACGCAAGCAGGTAACAAAG 60.069 52.381 0.00 0.00 45.62 2.77
1600 1659 1.276705 TGTATGGACGCAAGCAGGTAA 59.723 47.619 0.00 0.00 45.62 2.85
1603 1662 0.659427 CATGTATGGACGCAAGCAGG 59.341 55.000 0.00 0.00 45.62 4.85
1627 1686 3.637432 TGCGAACATTCAAAACCATCAC 58.363 40.909 0.00 0.00 0.00 3.06
1657 1717 1.865865 AGACGCGGCGATTCAAATAT 58.134 45.000 30.94 2.06 0.00 1.28
1678 1738 6.514947 TCCAAACAGAAAAGGAAATCATGTG 58.485 36.000 0.00 0.00 0.00 3.21
1699 1759 6.348458 CGAGCAGAAACACAATAATTCTTCCA 60.348 38.462 0.00 0.00 31.26 3.53
1757 1817 1.403687 CGGATCCCTCCTTCTCCCAC 61.404 65.000 6.06 0.00 39.65 4.61
1758 1818 1.075226 CGGATCCCTCCTTCTCCCA 60.075 63.158 6.06 0.00 39.65 4.37
1785 1845 4.003788 CCGCCTCCACCTTCGTGT 62.004 66.667 0.00 0.00 38.41 4.49
1875 1935 1.063266 CAGCTACCTCTCCTCCTCCTT 60.063 57.143 0.00 0.00 0.00 3.36
1893 1964 0.250295 TGCACCGTTCCTTCTTCCAG 60.250 55.000 0.00 0.00 0.00 3.86
1894 1965 0.181587 TTGCACCGTTCCTTCTTCCA 59.818 50.000 0.00 0.00 0.00 3.53
1896 1967 1.002792 GTGTTGCACCGTTCCTTCTTC 60.003 52.381 0.00 0.00 0.00 2.87
1967 2050 4.220163 CCCTCCCGATCCTCCCGA 62.220 72.222 0.00 0.00 0.00 5.14
1968 2051 4.220163 TCCCTCCCGATCCTCCCG 62.220 72.222 0.00 0.00 0.00 5.14
1969 2052 2.203714 CTCCCTCCCGATCCTCCC 60.204 72.222 0.00 0.00 0.00 4.30
1970 2053 2.920384 GCTCCCTCCCGATCCTCC 60.920 72.222 0.00 0.00 0.00 4.30
1971 2054 3.299190 CGCTCCCTCCCGATCCTC 61.299 72.222 0.00 0.00 0.00 3.71
1972 2055 3.801068 CTCGCTCCCTCCCGATCCT 62.801 68.421 0.00 0.00 32.52 3.24
1973 2056 3.299190 CTCGCTCCCTCCCGATCC 61.299 72.222 0.00 0.00 32.52 3.36
1974 2057 2.519780 ACTCGCTCCCTCCCGATC 60.520 66.667 0.00 0.00 32.52 3.69
1975 2058 2.835431 CACTCGCTCCCTCCCGAT 60.835 66.667 0.00 0.00 32.52 4.18
2025 2109 4.324936 CAGCTTGCTTCTTCGTAGTTCTAC 59.675 45.833 0.00 0.38 0.00 2.59
2035 2119 2.071688 TCTCGTCAGCTTGCTTCTTC 57.928 50.000 0.00 0.00 0.00 2.87
2051 2135 2.291465 TGACAAAACTGCAGTGCATCTC 59.709 45.455 22.49 11.90 38.13 2.75
2120 2204 7.094248 TGAGACCAGAAACATATGTGGAAAATG 60.094 37.037 9.63 3.34 33.95 2.32
2251 2335 1.010917 AGGGGGCAGGGAGTTTAGTAT 59.989 52.381 0.00 0.00 0.00 2.12
2252 2336 0.420272 AGGGGGCAGGGAGTTTAGTA 59.580 55.000 0.00 0.00 0.00 1.82
2253 2337 0.914902 GAGGGGGCAGGGAGTTTAGT 60.915 60.000 0.00 0.00 0.00 2.24
2254 2338 1.636769 GGAGGGGGCAGGGAGTTTAG 61.637 65.000 0.00 0.00 0.00 1.85
2255 2339 1.618447 GGAGGGGGCAGGGAGTTTA 60.618 63.158 0.00 0.00 0.00 2.01
2256 2340 2.941583 GGAGGGGGCAGGGAGTTT 60.942 66.667 0.00 0.00 0.00 2.66
2257 2341 3.523681 AAGGAGGGGGCAGGGAGTT 62.524 63.158 0.00 0.00 0.00 3.01
2258 2342 3.952799 GAAGGAGGGGGCAGGGAGT 62.953 68.421 0.00 0.00 0.00 3.85
2259 2343 3.093172 GAAGGAGGGGGCAGGGAG 61.093 72.222 0.00 0.00 0.00 4.30
2260 2344 3.208342 AAGAAGGAGGGGGCAGGGA 62.208 63.158 0.00 0.00 0.00 4.20
2261 2345 2.615288 AAGAAGGAGGGGGCAGGG 60.615 66.667 0.00 0.00 0.00 4.45
2262 2346 1.617839 AGAAGAAGGAGGGGGCAGG 60.618 63.158 0.00 0.00 0.00 4.85
2263 2347 1.204113 ACAGAAGAAGGAGGGGGCAG 61.204 60.000 0.00 0.00 0.00 4.85
2264 2348 1.151810 ACAGAAGAAGGAGGGGGCA 60.152 57.895 0.00 0.00 0.00 5.36
2265 2349 1.201429 TGACAGAAGAAGGAGGGGGC 61.201 60.000 0.00 0.00 0.00 5.80
2266 2350 0.615850 GTGACAGAAGAAGGAGGGGG 59.384 60.000 0.00 0.00 0.00 5.40
2267 2351 1.352083 TGTGACAGAAGAAGGAGGGG 58.648 55.000 0.00 0.00 0.00 4.79
2268 2352 2.304180 ACATGTGACAGAAGAAGGAGGG 59.696 50.000 0.00 0.00 0.00 4.30
2269 2353 3.244353 ACACATGTGACAGAAGAAGGAGG 60.244 47.826 31.94 0.00 0.00 4.30
2270 2354 4.000331 ACACATGTGACAGAAGAAGGAG 58.000 45.455 31.94 0.41 0.00 3.69
2271 2355 4.129380 CAACACATGTGACAGAAGAAGGA 58.871 43.478 31.94 0.00 0.00 3.36
2272 2356 3.879295 ACAACACATGTGACAGAAGAAGG 59.121 43.478 31.94 10.18 41.93 3.46
2273 2357 5.490139 AACAACACATGTGACAGAAGAAG 57.510 39.130 31.94 11.87 42.99 2.85
2274 2358 4.335315 GGAACAACACATGTGACAGAAGAA 59.665 41.667 31.94 0.00 42.99 2.52
2275 2359 3.876914 GGAACAACACATGTGACAGAAGA 59.123 43.478 31.94 0.00 42.99 2.87
2276 2360 3.003689 GGGAACAACACATGTGACAGAAG 59.996 47.826 31.94 15.46 42.99 2.85
2277 2361 2.948979 GGGAACAACACATGTGACAGAA 59.051 45.455 31.94 0.00 42.99 3.02
2278 2362 2.172505 AGGGAACAACACATGTGACAGA 59.827 45.455 31.94 0.00 42.99 3.41
2279 2363 2.575532 AGGGAACAACACATGTGACAG 58.424 47.619 31.94 20.94 42.99 3.51
2280 2364 2.687425 CAAGGGAACAACACATGTGACA 59.313 45.455 31.94 0.00 42.99 3.58
2281 2365 2.687935 ACAAGGGAACAACACATGTGAC 59.312 45.455 31.94 15.64 42.99 3.67
2282 2366 2.948979 GACAAGGGAACAACACATGTGA 59.051 45.455 31.94 0.00 42.99 3.58
2283 2367 2.687425 TGACAAGGGAACAACACATGTG 59.313 45.455 24.25 24.25 42.99 3.21
2284 2368 3.011566 TGACAAGGGAACAACACATGT 57.988 42.857 0.00 0.00 46.82 3.21
2285 2369 3.569277 TGATGACAAGGGAACAACACATG 59.431 43.478 0.00 0.00 0.00 3.21
2286 2370 3.822735 CTGATGACAAGGGAACAACACAT 59.177 43.478 0.00 0.00 0.00 3.21
2287 2371 3.213506 CTGATGACAAGGGAACAACACA 58.786 45.455 0.00 0.00 0.00 3.72
2288 2372 3.003689 CACTGATGACAAGGGAACAACAC 59.996 47.826 0.00 0.00 0.00 3.32
2289 2373 3.118075 TCACTGATGACAAGGGAACAACA 60.118 43.478 0.00 0.00 0.00 3.33
2290 2374 3.476552 TCACTGATGACAAGGGAACAAC 58.523 45.455 0.00 0.00 0.00 3.32
2291 2375 3.743521 CTCACTGATGACAAGGGAACAA 58.256 45.455 0.00 0.00 0.00 2.83
2292 2376 2.550855 GCTCACTGATGACAAGGGAACA 60.551 50.000 0.00 0.00 0.00 3.18
2293 2377 2.079925 GCTCACTGATGACAAGGGAAC 58.920 52.381 0.00 0.00 0.00 3.62
2294 2378 1.980765 AGCTCACTGATGACAAGGGAA 59.019 47.619 0.00 0.00 0.00 3.97
2295 2379 1.552337 GAGCTCACTGATGACAAGGGA 59.448 52.381 9.40 0.00 0.00 4.20
2296 2380 1.406614 GGAGCTCACTGATGACAAGGG 60.407 57.143 17.19 0.00 0.00 3.95
2297 2381 1.277273 TGGAGCTCACTGATGACAAGG 59.723 52.381 17.19 0.00 0.00 3.61
2298 2382 2.233186 TCTGGAGCTCACTGATGACAAG 59.767 50.000 17.19 0.00 0.00 3.16
2299 2383 2.250924 TCTGGAGCTCACTGATGACAA 58.749 47.619 17.19 0.00 0.00 3.18
2300 2384 1.928868 TCTGGAGCTCACTGATGACA 58.071 50.000 17.19 0.19 0.00 3.58
2301 2385 3.325293 TTTCTGGAGCTCACTGATGAC 57.675 47.619 17.19 0.00 0.00 3.06
2302 2386 3.071457 TGTTTTCTGGAGCTCACTGATGA 59.929 43.478 17.19 0.99 0.00 2.92
2303 2387 3.188048 GTGTTTTCTGGAGCTCACTGATG 59.812 47.826 17.19 0.00 0.00 3.07
2304 2388 3.181451 TGTGTTTTCTGGAGCTCACTGAT 60.181 43.478 17.19 0.00 0.00 2.90
2305 2389 2.170397 TGTGTTTTCTGGAGCTCACTGA 59.830 45.455 17.19 11.30 0.00 3.41
2306 2390 2.564771 TGTGTTTTCTGGAGCTCACTG 58.435 47.619 17.19 9.14 0.00 3.66
2307 2391 2.945668 GTTGTGTTTTCTGGAGCTCACT 59.054 45.455 17.19 0.00 0.00 3.41
2308 2392 2.945668 AGTTGTGTTTTCTGGAGCTCAC 59.054 45.455 17.19 4.26 0.00 3.51
2309 2393 2.945008 CAGTTGTGTTTTCTGGAGCTCA 59.055 45.455 17.19 0.61 0.00 4.26
2310 2394 2.287248 GCAGTTGTGTTTTCTGGAGCTC 60.287 50.000 4.71 4.71 0.00 4.09
2311 2395 1.678101 GCAGTTGTGTTTTCTGGAGCT 59.322 47.619 0.00 0.00 0.00 4.09
2312 2396 1.405105 TGCAGTTGTGTTTTCTGGAGC 59.595 47.619 0.00 0.00 0.00 4.70
2313 2397 3.489738 CCTTGCAGTTGTGTTTTCTGGAG 60.490 47.826 0.00 0.00 31.89 3.86
2314 2398 2.426738 CCTTGCAGTTGTGTTTTCTGGA 59.573 45.455 0.00 0.00 0.00 3.86
2315 2399 2.166254 ACCTTGCAGTTGTGTTTTCTGG 59.834 45.455 0.00 0.00 0.00 3.86
2316 2400 3.508744 ACCTTGCAGTTGTGTTTTCTG 57.491 42.857 0.00 0.00 0.00 3.02
2317 2401 4.013728 TGTACCTTGCAGTTGTGTTTTCT 58.986 39.130 0.00 0.00 0.00 2.52
2318 2402 4.095782 TCTGTACCTTGCAGTTGTGTTTTC 59.904 41.667 0.00 0.00 35.60 2.29
2319 2403 4.013728 TCTGTACCTTGCAGTTGTGTTTT 58.986 39.130 0.00 0.00 35.60 2.43
2320 2404 3.616219 TCTGTACCTTGCAGTTGTGTTT 58.384 40.909 0.00 0.00 35.60 2.83
2321 2405 3.275617 TCTGTACCTTGCAGTTGTGTT 57.724 42.857 0.00 0.00 35.60 3.32
2322 2406 3.275617 TTCTGTACCTTGCAGTTGTGT 57.724 42.857 0.00 0.00 35.60 3.72
2323 2407 4.997395 ACTATTCTGTACCTTGCAGTTGTG 59.003 41.667 0.00 0.00 35.60 3.33
2324 2408 5.228945 ACTATTCTGTACCTTGCAGTTGT 57.771 39.130 0.00 0.00 35.60 3.32
2325 2409 5.617751 GCAACTATTCTGTACCTTGCAGTTG 60.618 44.000 16.40 16.40 42.71 3.16
2326 2410 4.455877 GCAACTATTCTGTACCTTGCAGTT 59.544 41.667 0.00 0.00 35.60 3.16
2327 2411 4.003648 GCAACTATTCTGTACCTTGCAGT 58.996 43.478 0.00 0.00 35.60 4.40
2328 2412 3.375299 GGCAACTATTCTGTACCTTGCAG 59.625 47.826 0.00 0.00 36.04 4.41
2329 2413 3.244735 TGGCAACTATTCTGTACCTTGCA 60.245 43.478 0.00 0.00 36.04 4.08
2330 2414 3.127030 GTGGCAACTATTCTGTACCTTGC 59.873 47.826 0.00 0.00 37.61 4.01
2331 2415 4.579869 AGTGGCAACTATTCTGTACCTTG 58.420 43.478 0.00 0.00 33.79 3.61
2332 2416 4.910458 AGTGGCAACTATTCTGTACCTT 57.090 40.909 0.00 0.00 33.79 3.50
2333 2417 4.910458 AAGTGGCAACTATTCTGTACCT 57.090 40.909 0.00 0.00 34.77 3.08
2334 2418 5.731591 ACTAAGTGGCAACTATTCTGTACC 58.268 41.667 0.00 0.00 34.77 3.34
2335 2419 7.360946 CCAAACTAAGTGGCAACTATTCTGTAC 60.361 40.741 0.00 0.00 34.77 2.90
2336 2420 6.653320 CCAAACTAAGTGGCAACTATTCTGTA 59.347 38.462 0.00 0.00 34.77 2.74
2337 2421 5.473504 CCAAACTAAGTGGCAACTATTCTGT 59.526 40.000 0.00 0.00 34.77 3.41
2338 2422 5.705441 TCCAAACTAAGTGGCAACTATTCTG 59.295 40.000 0.00 0.00 34.77 3.02
2339 2423 5.876357 TCCAAACTAAGTGGCAACTATTCT 58.124 37.500 0.00 0.00 34.77 2.40
2340 2424 6.759497 ATCCAAACTAAGTGGCAACTATTC 57.241 37.500 0.00 0.00 34.77 1.75
2341 2425 7.539034 AAATCCAAACTAAGTGGCAACTATT 57.461 32.000 0.00 0.00 34.77 1.73
2342 2426 7.539034 AAAATCCAAACTAAGTGGCAACTAT 57.461 32.000 0.00 0.00 34.77 2.12
2343 2427 6.969993 AAAATCCAAACTAAGTGGCAACTA 57.030 33.333 0.00 0.00 34.77 2.24
2344 2428 5.869649 AAAATCCAAACTAAGTGGCAACT 57.130 34.783 0.00 0.00 38.71 3.16
2345 2429 6.745116 ACTAAAATCCAAACTAAGTGGCAAC 58.255 36.000 0.00 0.00 35.99 4.17
2346 2430 6.969993 ACTAAAATCCAAACTAAGTGGCAA 57.030 33.333 0.00 0.00 35.99 4.52
2347 2431 6.969993 AACTAAAATCCAAACTAAGTGGCA 57.030 33.333 0.00 0.00 35.99 4.92
2348 2432 9.752961 TTTTAACTAAAATCCAAACTAAGTGGC 57.247 29.630 0.00 0.00 31.97 5.01
2380 2464 9.517609 CCAACTCTATAGTGTTACTAACATGTC 57.482 37.037 17.41 0.00 44.35 3.06
2381 2465 9.251440 TCCAACTCTATAGTGTTACTAACATGT 57.749 33.333 17.41 0.00 44.35 3.21
2382 2466 9.517609 GTCCAACTCTATAGTGTTACTAACATG 57.482 37.037 17.41 6.09 44.35 3.21
2383 2467 9.251440 TGTCCAACTCTATAGTGTTACTAACAT 57.749 33.333 17.41 0.00 44.35 2.71
2384 2468 8.640063 TGTCCAACTCTATAGTGTTACTAACA 57.360 34.615 17.41 15.19 39.52 2.41
2396 2480 9.529325 CGACTTCATTTATTGTCCAACTCTATA 57.471 33.333 0.00 0.00 0.00 1.31
2397 2481 8.258007 TCGACTTCATTTATTGTCCAACTCTAT 58.742 33.333 0.00 0.00 0.00 1.98
2398 2482 7.544566 GTCGACTTCATTTATTGTCCAACTCTA 59.455 37.037 8.70 0.00 0.00 2.43
2399 2483 6.369065 GTCGACTTCATTTATTGTCCAACTCT 59.631 38.462 8.70 0.00 0.00 3.24
2400 2484 6.369065 AGTCGACTTCATTTATTGTCCAACTC 59.631 38.462 13.58 0.00 0.00 3.01
2401 2485 6.231211 AGTCGACTTCATTTATTGTCCAACT 58.769 36.000 13.58 0.00 0.00 3.16
2402 2486 6.481954 AGTCGACTTCATTTATTGTCCAAC 57.518 37.500 13.58 0.00 0.00 3.77
2403 2487 7.156000 TGTAGTCGACTTCATTTATTGTCCAA 58.844 34.615 25.44 0.00 0.00 3.53
2404 2488 6.693466 TGTAGTCGACTTCATTTATTGTCCA 58.307 36.000 25.44 0.00 0.00 4.02
2405 2489 7.042658 GGATGTAGTCGACTTCATTTATTGTCC 60.043 40.741 30.55 23.63 34.72 4.02
2406 2490 7.306051 CGGATGTAGTCGACTTCATTTATTGTC 60.306 40.741 30.55 19.89 34.72 3.18
2407 2491 6.475727 CGGATGTAGTCGACTTCATTTATTGT 59.524 38.462 30.55 13.86 34.72 2.71
2408 2492 6.695713 TCGGATGTAGTCGACTTCATTTATTG 59.304 38.462 30.55 20.36 34.72 1.90
2409 2493 6.802608 TCGGATGTAGTCGACTTCATTTATT 58.197 36.000 30.55 15.13 34.72 1.40
2410 2494 6.387041 TCGGATGTAGTCGACTTCATTTAT 57.613 37.500 30.55 15.46 34.72 1.40
2411 2495 5.823209 TCGGATGTAGTCGACTTCATTTA 57.177 39.130 30.55 19.35 34.72 1.40
2412 2496 4.713824 TCGGATGTAGTCGACTTCATTT 57.286 40.909 30.55 16.42 34.72 2.32
2413 2497 4.421948 GTTCGGATGTAGTCGACTTCATT 58.578 43.478 30.55 18.49 34.72 2.57
2414 2498 3.487042 CGTTCGGATGTAGTCGACTTCAT 60.487 47.826 30.48 30.48 36.81 2.57
2415 2499 2.159612 CGTTCGGATGTAGTCGACTTCA 60.160 50.000 25.44 24.89 34.58 3.02
2416 2500 2.094894 TCGTTCGGATGTAGTCGACTTC 59.905 50.000 25.44 19.54 34.99 3.01
2417 2501 2.079158 TCGTTCGGATGTAGTCGACTT 58.921 47.619 25.44 5.50 34.99 3.01
2418 2502 1.730501 TCGTTCGGATGTAGTCGACT 58.269 50.000 23.66 23.66 34.99 4.18
2419 2503 2.159599 AGTTCGTTCGGATGTAGTCGAC 60.160 50.000 7.70 7.70 34.99 4.20
2420 2504 2.079158 AGTTCGTTCGGATGTAGTCGA 58.921 47.619 0.00 0.00 0.00 4.20
2421 2505 2.539346 AGTTCGTTCGGATGTAGTCG 57.461 50.000 0.00 0.00 0.00 4.18
2422 2506 5.819059 AGATAAGTTCGTTCGGATGTAGTC 58.181 41.667 0.00 0.00 0.00 2.59
2423 2507 5.831702 AGATAAGTTCGTTCGGATGTAGT 57.168 39.130 0.00 0.00 0.00 2.73
2424 2508 5.051641 GCAAGATAAGTTCGTTCGGATGTAG 60.052 44.000 0.00 0.00 0.00 2.74
2425 2509 4.802039 GCAAGATAAGTTCGTTCGGATGTA 59.198 41.667 0.00 0.00 0.00 2.29
2426 2510 3.617263 GCAAGATAAGTTCGTTCGGATGT 59.383 43.478 0.00 0.00 0.00 3.06
2427 2511 3.865745 AGCAAGATAAGTTCGTTCGGATG 59.134 43.478 0.00 0.00 0.00 3.51
2428 2512 4.124851 AGCAAGATAAGTTCGTTCGGAT 57.875 40.909 0.00 0.00 0.00 4.18
2429 2513 3.587797 AGCAAGATAAGTTCGTTCGGA 57.412 42.857 0.00 0.00 0.00 4.55
2430 2514 3.062234 GGAAGCAAGATAAGTTCGTTCGG 59.938 47.826 0.00 0.00 0.00 4.30
2431 2515 3.678072 TGGAAGCAAGATAAGTTCGTTCG 59.322 43.478 0.00 0.00 0.00 3.95
2432 2516 5.408604 TCTTGGAAGCAAGATAAGTTCGTTC 59.591 40.000 0.00 0.00 36.39 3.95
2433 2517 5.305585 TCTTGGAAGCAAGATAAGTTCGTT 58.694 37.500 0.00 0.00 36.39 3.85
2434 2518 4.894784 TCTTGGAAGCAAGATAAGTTCGT 58.105 39.130 0.00 0.00 36.39 3.85
2435 2519 5.639506 TCTTCTTGGAAGCAAGATAAGTTCG 59.360 40.000 0.00 0.00 40.43 3.95
2436 2520 6.652900 ACTCTTCTTGGAAGCAAGATAAGTTC 59.347 38.462 0.00 0.00 40.43 3.01
2437 2521 6.538263 ACTCTTCTTGGAAGCAAGATAAGTT 58.462 36.000 0.00 0.00 40.43 2.66
2438 2522 6.120507 ACTCTTCTTGGAAGCAAGATAAGT 57.879 37.500 0.00 0.00 40.43 2.24
2439 2523 8.553459 TTTACTCTTCTTGGAAGCAAGATAAG 57.447 34.615 0.00 0.00 40.43 1.73
2440 2524 8.918202 TTTTACTCTTCTTGGAAGCAAGATAA 57.082 30.769 0.00 0.00 40.43 1.75
2441 2525 9.167311 GATTTTACTCTTCTTGGAAGCAAGATA 57.833 33.333 0.00 0.00 40.43 1.98
2442 2526 7.667219 TGATTTTACTCTTCTTGGAAGCAAGAT 59.333 33.333 0.00 0.00 40.43 2.40
2443 2527 6.998074 TGATTTTACTCTTCTTGGAAGCAAGA 59.002 34.615 0.00 0.00 39.21 3.02
2444 2528 7.206981 TGATTTTACTCTTCTTGGAAGCAAG 57.793 36.000 2.74 0.00 0.00 4.01
2445 2529 7.667219 AGATGATTTTACTCTTCTTGGAAGCAA 59.333 33.333 2.74 0.00 0.00 3.91
2446 2530 7.170965 AGATGATTTTACTCTTCTTGGAAGCA 58.829 34.615 2.74 0.00 0.00 3.91
2447 2531 7.622893 AGATGATTTTACTCTTCTTGGAAGC 57.377 36.000 2.74 0.00 0.00 3.86
2467 2551 9.977762 GCAAAAAGCAGGAAATTATTAAAGATG 57.022 29.630 0.00 0.00 44.79 2.90
2504 2588 6.915843 ACGACATTCCAAACATGTTAAGAAAC 59.084 34.615 20.73 15.37 34.89 2.78
2505 2589 7.033530 ACGACATTCCAAACATGTTAAGAAA 57.966 32.000 20.73 10.99 34.89 2.52
2506 2590 6.627395 ACGACATTCCAAACATGTTAAGAA 57.373 33.333 19.70 19.70 34.89 2.52
2507 2591 6.627395 AACGACATTCCAAACATGTTAAGA 57.373 33.333 12.39 8.89 34.89 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.