Multiple sequence alignment - TraesCS6A01G335100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G335100 chr6A 100.000 2849 0 0 1 2849 566431684 566428836 0.000000e+00 5262.0
1 TraesCS6A01G335100 chr6A 97.358 530 12 2 1 528 487772532 487772003 0.000000e+00 900.0
2 TraesCS6A01G335100 chr6A 98.598 214 3 0 309 522 487773812 487774025 2.070000e-101 379.0
3 TraesCS6A01G335100 chr6A 96.729 214 7 0 309 522 566432991 566433204 9.710000e-95 357.0
4 TraesCS6A01G335100 chr6B 91.800 1939 74 36 784 2670 637862590 637860685 0.000000e+00 2621.0
5 TraesCS6A01G335100 chr6B 92.469 239 8 6 550 783 637862853 637862620 1.640000e-87 333.0
6 TraesCS6A01G335100 chr6D 89.990 2088 77 43 559 2575 423170372 423172398 0.000000e+00 2577.0
7 TraesCS6A01G335100 chr6D 94.350 177 10 0 2673 2849 58629024 58628848 3.620000e-69 272.0
8 TraesCS6A01G335100 chr2B 95.385 260 12 0 1 260 267901236 267900977 5.680000e-112 414.0
9 TraesCS6A01G335100 chr2B 94.393 214 11 1 309 522 467877591 467877803 7.610000e-86 327.0
10 TraesCS6A01G335100 chr5D 89.028 319 20 11 2 309 351405280 351405594 5.760000e-102 381.0
11 TraesCS6A01G335100 chr5D 95.000 180 9 0 2670 2849 555895637 555895816 1.670000e-72 283.0
12 TraesCS6A01G335100 chr5D 93.333 180 12 0 2670 2849 482550373 482550194 1.680000e-67 267.0
13 TraesCS6A01G335100 chr3A 94.760 229 8 4 303 529 435354508 435354282 1.260000e-93 353.0
14 TraesCS6A01G335100 chr3A 98.649 74 1 0 1 74 435354572 435354499 6.400000e-27 132.0
15 TraesCS6A01G335100 chr5A 94.737 228 9 3 303 528 376844952 376844726 4.520000e-93 351.0
16 TraesCS6A01G335100 chr5A 83.758 314 26 12 546 854 687294783 687295076 1.010000e-69 274.0
17 TraesCS6A01G335100 chr5A 93.333 180 12 0 2670 2849 524224051 524224230 1.680000e-67 267.0
18 TraesCS6A01G335100 chr5A 83.333 312 27 12 548 854 652659637 652659928 6.050000e-67 265.0
19 TraesCS6A01G335100 chr5A 82.075 318 14 6 1 313 451742588 451742867 6.140000e-57 231.0
20 TraesCS6A01G335100 chr5A 98.649 74 1 0 1 74 376845016 376844943 6.400000e-27 132.0
21 TraesCS6A01G335100 chr7B 95.327 214 10 0 309 522 656195711 656195498 9.780000e-90 340.0
22 TraesCS6A01G335100 chr7B 83.654 312 25 13 548 854 472330869 472331159 1.300000e-68 270.0
23 TraesCS6A01G335100 chr7B 94.231 104 6 0 1280 1383 79051418 79051521 2.940000e-35 159.0
24 TraesCS6A01G335100 chr1B 94.521 219 12 0 309 527 570298783 570298565 3.520000e-89 339.0
25 TraesCS6A01G335100 chr1B 83.013 312 28 12 548 854 593493119 593493410 2.820000e-65 259.0
26 TraesCS6A01G335100 chr7A 93.304 224 13 2 305 528 487477325 487477104 2.120000e-86 329.0
27 TraesCS6A01G335100 chr7A 95.192 104 5 0 1280 1383 122207641 122207744 6.310000e-37 165.0
28 TraesCS6A01G335100 chr5B 83.974 312 25 13 548 854 420374498 420374789 2.800000e-70 276.0
29 TraesCS6A01G335100 chr5B 83.333 312 27 12 548 854 529227937 529227646 6.050000e-67 265.0
30 TraesCS6A01G335100 chr5B 82.298 322 24 16 2 313 412463103 412463401 6.100000e-62 248.0
31 TraesCS6A01G335100 chr5B 88.811 143 10 3 655 797 592856083 592856219 1.360000e-38 171.0
32 TraesCS6A01G335100 chr4A 94.382 178 9 1 2673 2849 620327941 620327764 3.620000e-69 272.0
33 TraesCS6A01G335100 chr4A 95.000 60 1 2 1331 1389 545215491 545215549 3.020000e-15 93.5
34 TraesCS6A01G335100 chrUn 93.333 180 12 0 2670 2849 91453161 91453340 1.680000e-67 267.0
35 TraesCS6A01G335100 chr7D 93.333 180 12 0 2670 2849 394950540 394950361 1.680000e-67 267.0
36 TraesCS6A01G335100 chr7D 93.333 180 12 0 2670 2849 503325619 503325798 1.680000e-67 267.0
37 TraesCS6A01G335100 chr7D 94.231 104 6 0 1280 1383 117792106 117792209 2.940000e-35 159.0
38 TraesCS6A01G335100 chr1D 93.333 180 12 0 2670 2849 335360578 335360757 1.680000e-67 267.0
39 TraesCS6A01G335100 chr1D 95.556 45 2 0 1331 1375 212526729 212526773 3.940000e-09 73.1
40 TraesCS6A01G335100 chr4D 95.082 61 1 2 1331 1390 51296327 51296268 8.400000e-16 95.3
41 TraesCS6A01G335100 chr4D 95.556 45 2 0 1331 1375 390273862 390273906 3.940000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G335100 chr6A 566428836 566431684 2848 True 5262 5262 100.0000 1 2849 1 chr6A.!!$R2 2848
1 TraesCS6A01G335100 chr6A 487772003 487772532 529 True 900 900 97.3580 1 528 1 chr6A.!!$R1 527
2 TraesCS6A01G335100 chr6B 637860685 637862853 2168 True 1477 2621 92.1345 550 2670 2 chr6B.!!$R1 2120
3 TraesCS6A01G335100 chr6D 423170372 423172398 2026 False 2577 2577 89.9900 559 2575 1 chr6D.!!$F1 2016

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
627 636 0.032815 GGCAGGATAGTCGAGGAAGC 59.967 60.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 2438 2.029739 TGTACATCATGTATACGGGCCG 60.03 50.0 27.06 27.06 35.05 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 4.241555 CTTGCCCGCGCCTCCTAT 62.242 66.667 0.00 0.00 0.00 2.57
102 103 4.545706 TTGCCCGCGCCTCCTATG 62.546 66.667 0.00 0.00 0.00 2.23
112 113 4.671569 CTCCTATGCCGGAGCCGC 62.672 72.222 5.05 0.00 43.69 6.53
136 137 3.499737 CGTGGCCGTCCATTGCTC 61.500 66.667 0.00 0.00 45.62 4.26
137 138 3.499737 GTGGCCGTCCATTGCTCG 61.500 66.667 0.00 0.00 45.62 5.03
143 144 3.869272 GTCCATTGCTCGCCGCTG 61.869 66.667 0.00 0.00 40.11 5.18
172 173 2.364317 CGCCCTCCCTCTCCTCAA 60.364 66.667 0.00 0.00 0.00 3.02
173 174 1.764054 CGCCCTCCCTCTCCTCAAT 60.764 63.158 0.00 0.00 0.00 2.57
174 175 1.341156 CGCCCTCCCTCTCCTCAATT 61.341 60.000 0.00 0.00 0.00 2.32
175 176 0.922626 GCCCTCCCTCTCCTCAATTT 59.077 55.000 0.00 0.00 0.00 1.82
176 177 1.133945 GCCCTCCCTCTCCTCAATTTC 60.134 57.143 0.00 0.00 0.00 2.17
177 178 2.486716 CCCTCCCTCTCCTCAATTTCT 58.513 52.381 0.00 0.00 0.00 2.52
178 179 2.172293 CCCTCCCTCTCCTCAATTTCTG 59.828 54.545 0.00 0.00 0.00 3.02
179 180 3.110705 CCTCCCTCTCCTCAATTTCTGA 58.889 50.000 0.00 0.00 0.00 3.27
180 181 3.118445 CCTCCCTCTCCTCAATTTCTGAC 60.118 52.174 0.00 0.00 0.00 3.51
181 182 2.497675 TCCCTCTCCTCAATTTCTGACG 59.502 50.000 0.00 0.00 0.00 4.35
182 183 2.419297 CCCTCTCCTCAATTTCTGACGG 60.419 54.545 0.00 0.00 0.00 4.79
183 184 2.497675 CCTCTCCTCAATTTCTGACGGA 59.502 50.000 0.00 0.00 33.17 4.69
184 185 3.133721 CCTCTCCTCAATTTCTGACGGAT 59.866 47.826 0.00 0.00 33.52 4.18
185 186 4.367450 CTCTCCTCAATTTCTGACGGATC 58.633 47.826 0.00 0.00 33.52 3.36
186 187 4.026744 TCTCCTCAATTTCTGACGGATCT 58.973 43.478 0.00 0.00 33.52 2.75
187 188 4.467795 TCTCCTCAATTTCTGACGGATCTT 59.532 41.667 0.00 0.00 33.52 2.40
188 189 4.507710 TCCTCAATTTCTGACGGATCTTG 58.492 43.478 0.00 0.00 30.73 3.02
189 190 3.064545 CCTCAATTTCTGACGGATCTTGC 59.935 47.826 0.00 0.00 0.00 4.01
190 191 3.937706 CTCAATTTCTGACGGATCTTGCT 59.062 43.478 0.00 0.00 0.00 3.91
191 192 3.686241 TCAATTTCTGACGGATCTTGCTG 59.314 43.478 0.00 0.00 0.00 4.41
192 193 2.099141 TTTCTGACGGATCTTGCTGG 57.901 50.000 0.00 0.00 0.00 4.85
193 194 0.976641 TTCTGACGGATCTTGCTGGT 59.023 50.000 0.00 0.00 0.00 4.00
194 195 0.532573 TCTGACGGATCTTGCTGGTC 59.467 55.000 0.00 0.00 0.00 4.02
195 196 0.534412 CTGACGGATCTTGCTGGTCT 59.466 55.000 0.00 0.00 0.00 3.85
196 197 0.247460 TGACGGATCTTGCTGGTCTG 59.753 55.000 0.00 0.00 0.00 3.51
197 198 0.247736 GACGGATCTTGCTGGTCTGT 59.752 55.000 5.01 5.01 34.34 3.41
198 199 0.247736 ACGGATCTTGCTGGTCTGTC 59.752 55.000 0.00 0.00 0.00 3.51
199 200 0.803768 CGGATCTTGCTGGTCTGTCG 60.804 60.000 0.00 0.00 0.00 4.35
200 201 1.086634 GGATCTTGCTGGTCTGTCGC 61.087 60.000 0.00 0.00 0.00 5.19
201 202 1.078848 ATCTTGCTGGTCTGTCGCC 60.079 57.895 0.00 0.00 0.00 5.54
202 203 2.842394 ATCTTGCTGGTCTGTCGCCG 62.842 60.000 0.00 0.00 0.00 6.46
203 204 4.680237 TTGCTGGTCTGTCGCCGG 62.680 66.667 0.00 0.00 35.53 6.13
206 207 3.991051 CTGGTCTGTCGCCGGTGT 61.991 66.667 16.01 0.00 0.00 4.16
207 208 4.293648 TGGTCTGTCGCCGGTGTG 62.294 66.667 16.01 6.97 0.00 3.82
208 209 3.986006 GGTCTGTCGCCGGTGTGA 61.986 66.667 16.01 9.28 0.00 3.58
209 210 2.430921 GTCTGTCGCCGGTGTGAG 60.431 66.667 16.01 11.92 0.00 3.51
210 211 2.596338 TCTGTCGCCGGTGTGAGA 60.596 61.111 16.01 14.07 0.00 3.27
211 212 2.430921 CTGTCGCCGGTGTGAGAC 60.431 66.667 16.01 11.38 0.00 3.36
212 213 3.207547 CTGTCGCCGGTGTGAGACA 62.208 63.158 16.01 15.03 40.77 3.41
213 214 2.430921 GTCGCCGGTGTGAGACAG 60.431 66.667 16.01 0.00 34.09 3.51
214 215 2.596338 TCGCCGGTGTGAGACAGA 60.596 61.111 16.01 0.00 0.00 3.41
215 216 2.126307 CGCCGGTGTGAGACAGAG 60.126 66.667 6.91 0.00 0.00 3.35
216 217 2.433318 GCCGGTGTGAGACAGAGC 60.433 66.667 1.90 0.00 0.00 4.09
217 218 2.936912 GCCGGTGTGAGACAGAGCT 61.937 63.158 1.90 0.00 0.00 4.09
218 219 1.080230 CCGGTGTGAGACAGAGCTG 60.080 63.158 0.00 0.00 0.00 4.24
219 220 1.735920 CGGTGTGAGACAGAGCTGC 60.736 63.158 0.00 0.00 0.00 5.25
220 221 1.670590 GGTGTGAGACAGAGCTGCT 59.329 57.895 0.00 0.00 0.00 4.24
246 247 3.207354 GAACGCAGATCGGAGGGA 58.793 61.111 0.00 0.00 43.86 4.20
247 248 1.515954 GAACGCAGATCGGAGGGAA 59.484 57.895 0.00 0.00 43.86 3.97
248 249 0.528684 GAACGCAGATCGGAGGGAAG 60.529 60.000 0.00 0.00 43.86 3.46
249 250 1.961180 AACGCAGATCGGAGGGAAGG 61.961 60.000 0.00 0.00 43.86 3.46
250 251 2.825264 GCAGATCGGAGGGAAGGG 59.175 66.667 0.00 0.00 0.00 3.95
251 252 2.812619 GCAGATCGGAGGGAAGGGG 61.813 68.421 0.00 0.00 0.00 4.79
252 253 2.143419 CAGATCGGAGGGAAGGGGG 61.143 68.421 0.00 0.00 0.00 5.40
266 267 2.041265 GGGGGAAGCAGAGAGGGA 59.959 66.667 0.00 0.00 0.00 4.20
267 268 2.069430 GGGGGAAGCAGAGAGGGAG 61.069 68.421 0.00 0.00 0.00 4.30
268 269 2.741055 GGGGAAGCAGAGAGGGAGC 61.741 68.421 0.00 0.00 0.00 4.70
269 270 1.992277 GGGAAGCAGAGAGGGAGCA 60.992 63.158 0.00 0.00 0.00 4.26
270 271 1.521616 GGAAGCAGAGAGGGAGCAG 59.478 63.158 0.00 0.00 0.00 4.24
271 272 0.975040 GGAAGCAGAGAGGGAGCAGA 60.975 60.000 0.00 0.00 0.00 4.26
272 273 0.461135 GAAGCAGAGAGGGAGCAGAG 59.539 60.000 0.00 0.00 0.00 3.35
273 274 0.977108 AAGCAGAGAGGGAGCAGAGG 60.977 60.000 0.00 0.00 0.00 3.69
274 275 2.433994 GCAGAGAGGGAGCAGAGGG 61.434 68.421 0.00 0.00 0.00 4.30
275 276 1.761667 CAGAGAGGGAGCAGAGGGG 60.762 68.421 0.00 0.00 0.00 4.79
276 277 2.445654 GAGAGGGAGCAGAGGGGG 60.446 72.222 0.00 0.00 0.00 5.40
277 278 2.955246 AGAGGGAGCAGAGGGGGA 60.955 66.667 0.00 0.00 0.00 4.81
278 279 2.445654 GAGGGAGCAGAGGGGGAG 60.446 72.222 0.00 0.00 0.00 4.30
279 280 3.288381 AGGGAGCAGAGGGGGAGT 61.288 66.667 0.00 0.00 0.00 3.85
280 281 3.086600 GGGAGCAGAGGGGGAGTG 61.087 72.222 0.00 0.00 0.00 3.51
281 282 3.086600 GGAGCAGAGGGGGAGTGG 61.087 72.222 0.00 0.00 0.00 4.00
282 283 3.086600 GAGCAGAGGGGGAGTGGG 61.087 72.222 0.00 0.00 0.00 4.61
283 284 3.933542 GAGCAGAGGGGGAGTGGGT 62.934 68.421 0.00 0.00 0.00 4.51
284 285 3.721706 GCAGAGGGGGAGTGGGTG 61.722 72.222 0.00 0.00 0.00 4.61
285 286 3.011517 CAGAGGGGGAGTGGGTGG 61.012 72.222 0.00 0.00 0.00 4.61
286 287 3.208592 AGAGGGGGAGTGGGTGGA 61.209 66.667 0.00 0.00 0.00 4.02
287 288 2.689034 GAGGGGGAGTGGGTGGAG 60.689 72.222 0.00 0.00 0.00 3.86
292 293 3.775654 GGAGTGGGTGGAGCGGAG 61.776 72.222 0.00 0.00 0.00 4.63
293 294 2.680352 GAGTGGGTGGAGCGGAGA 60.680 66.667 0.00 0.00 0.00 3.71
294 295 2.681778 AGTGGGTGGAGCGGAGAG 60.682 66.667 0.00 0.00 0.00 3.20
295 296 3.775654 GTGGGTGGAGCGGAGAGG 61.776 72.222 0.00 0.00 0.00 3.69
296 297 3.992641 TGGGTGGAGCGGAGAGGA 61.993 66.667 0.00 0.00 0.00 3.71
297 298 3.151022 GGGTGGAGCGGAGAGGAG 61.151 72.222 0.00 0.00 0.00 3.69
298 299 3.151022 GGTGGAGCGGAGAGGAGG 61.151 72.222 0.00 0.00 0.00 4.30
299 300 3.151022 GTGGAGCGGAGAGGAGGG 61.151 72.222 0.00 0.00 0.00 4.30
300 301 4.465446 TGGAGCGGAGAGGAGGGG 62.465 72.222 0.00 0.00 0.00 4.79
301 302 4.144727 GGAGCGGAGAGGAGGGGA 62.145 72.222 0.00 0.00 0.00 4.81
302 303 2.520741 GAGCGGAGAGGAGGGGAG 60.521 72.222 0.00 0.00 0.00 4.30
303 304 3.024356 AGCGGAGAGGAGGGGAGA 61.024 66.667 0.00 0.00 0.00 3.71
304 305 2.520741 GCGGAGAGGAGGGGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
305 306 2.197324 CGGAGAGGAGGGGAGAGG 59.803 72.222 0.00 0.00 0.00 3.69
306 307 2.387772 CGGAGAGGAGGGGAGAGGA 61.388 68.421 0.00 0.00 0.00 3.71
307 308 1.541672 GGAGAGGAGGGGAGAGGAG 59.458 68.421 0.00 0.00 0.00 3.69
308 309 1.541672 GAGAGGAGGGGAGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
309 310 2.123033 GAGGAGGGGAGAGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
310 311 4.150454 AGGAGGGGAGAGGAGGCG 62.150 72.222 0.00 0.00 0.00 5.52
315 316 3.471806 GGGAGAGGAGGCGGGTTC 61.472 72.222 0.00 0.00 0.00 3.62
316 317 2.683933 GGAGAGGAGGCGGGTTCA 60.684 66.667 0.00 0.00 0.00 3.18
317 318 2.066999 GGAGAGGAGGCGGGTTCAT 61.067 63.158 0.00 0.00 0.00 2.57
318 319 1.627297 GGAGAGGAGGCGGGTTCATT 61.627 60.000 0.00 0.00 0.00 2.57
319 320 1.120530 GAGAGGAGGCGGGTTCATTA 58.879 55.000 0.00 0.00 0.00 1.90
320 321 1.069358 GAGAGGAGGCGGGTTCATTAG 59.931 57.143 0.00 0.00 0.00 1.73
321 322 0.831307 GAGGAGGCGGGTTCATTAGT 59.169 55.000 0.00 0.00 0.00 2.24
322 323 0.541863 AGGAGGCGGGTTCATTAGTG 59.458 55.000 0.00 0.00 0.00 2.74
323 324 1.095807 GGAGGCGGGTTCATTAGTGC 61.096 60.000 0.00 0.00 0.00 4.40
324 325 0.392461 GAGGCGGGTTCATTAGTGCA 60.392 55.000 0.00 0.00 0.00 4.57
325 326 0.037590 AGGCGGGTTCATTAGTGCAA 59.962 50.000 0.00 0.00 0.00 4.08
326 327 0.885196 GGCGGGTTCATTAGTGCAAA 59.115 50.000 0.00 0.00 0.00 3.68
327 328 1.135402 GGCGGGTTCATTAGTGCAAAG 60.135 52.381 0.00 0.00 0.00 2.77
328 329 1.135402 GCGGGTTCATTAGTGCAAAGG 60.135 52.381 0.00 0.00 0.00 3.11
329 330 1.135402 CGGGTTCATTAGTGCAAAGGC 60.135 52.381 0.00 0.00 41.68 4.35
330 331 1.204704 GGGTTCATTAGTGCAAAGGCC 59.795 52.381 0.00 0.00 40.13 5.19
331 332 1.892474 GGTTCATTAGTGCAAAGGCCA 59.108 47.619 5.01 0.00 40.13 5.36
332 333 2.094545 GGTTCATTAGTGCAAAGGCCAG 60.095 50.000 5.01 0.00 40.13 4.85
333 334 1.838112 TCATTAGTGCAAAGGCCAGG 58.162 50.000 5.01 0.00 40.13 4.45
334 335 0.819582 CATTAGTGCAAAGGCCAGGG 59.180 55.000 5.01 0.00 40.13 4.45
335 336 0.324645 ATTAGTGCAAAGGCCAGGGG 60.325 55.000 5.01 0.00 40.13 4.79
336 337 2.439553 TTAGTGCAAAGGCCAGGGGG 62.440 60.000 5.01 0.00 40.13 5.40
354 355 4.551702 GGGGGTAATTGAAAAATGTGCT 57.448 40.909 0.00 0.00 0.00 4.40
355 356 4.252878 GGGGGTAATTGAAAAATGTGCTG 58.747 43.478 0.00 0.00 0.00 4.41
356 357 3.684305 GGGGTAATTGAAAAATGTGCTGC 59.316 43.478 0.00 0.00 0.00 5.25
357 358 3.367630 GGGTAATTGAAAAATGTGCTGCG 59.632 43.478 0.00 0.00 0.00 5.18
358 359 3.181531 GGTAATTGAAAAATGTGCTGCGC 60.182 43.478 6.19 6.19 0.00 6.09
359 360 2.443887 ATTGAAAAATGTGCTGCGCT 57.556 40.000 14.92 0.00 0.00 5.92
360 361 1.489574 TTGAAAAATGTGCTGCGCTG 58.510 45.000 14.92 10.04 0.00 5.18
361 362 0.667453 TGAAAAATGTGCTGCGCTGA 59.333 45.000 19.32 0.00 0.00 4.26
362 363 1.055338 GAAAAATGTGCTGCGCTGAC 58.945 50.000 19.32 13.12 0.00 3.51
363 364 0.318955 AAAAATGTGCTGCGCTGACC 60.319 50.000 19.32 7.53 0.00 4.02
364 365 2.462255 AAAATGTGCTGCGCTGACCG 62.462 55.000 19.32 0.00 40.75 4.79
374 375 4.074526 GCTGACCGGCTCTGCTGA 62.075 66.667 20.55 0.00 40.01 4.26
375 376 2.125753 CTGACCGGCTCTGCTGAC 60.126 66.667 0.00 0.00 37.02 3.51
376 377 2.601666 TGACCGGCTCTGCTGACT 60.602 61.111 0.00 0.00 37.02 3.41
377 378 1.304134 TGACCGGCTCTGCTGACTA 60.304 57.895 0.00 0.00 37.02 2.59
378 379 1.315981 TGACCGGCTCTGCTGACTAG 61.316 60.000 0.00 0.00 37.02 2.57
379 380 2.010582 GACCGGCTCTGCTGACTAGG 62.011 65.000 0.00 0.00 37.02 3.02
380 381 2.105930 CGGCTCTGCTGACTAGGC 59.894 66.667 0.00 0.00 37.02 3.93
381 382 2.422231 CGGCTCTGCTGACTAGGCT 61.422 63.158 0.00 0.00 37.02 4.58
382 383 1.441311 GGCTCTGCTGACTAGGCTC 59.559 63.158 0.00 0.00 33.32 4.70
383 384 1.441311 GCTCTGCTGACTAGGCTCC 59.559 63.158 0.00 0.00 0.00 4.70
384 385 1.326213 GCTCTGCTGACTAGGCTCCA 61.326 60.000 0.00 0.00 0.00 3.86
385 386 0.459489 CTCTGCTGACTAGGCTCCAC 59.541 60.000 0.00 0.00 0.00 4.02
386 387 0.040351 TCTGCTGACTAGGCTCCACT 59.960 55.000 0.00 0.00 0.00 4.00
387 388 0.901124 CTGCTGACTAGGCTCCACTT 59.099 55.000 0.00 0.00 0.00 3.16
388 389 0.610174 TGCTGACTAGGCTCCACTTG 59.390 55.000 0.00 0.00 0.00 3.16
389 390 0.610687 GCTGACTAGGCTCCACTTGT 59.389 55.000 0.00 0.00 0.00 3.16
390 391 1.404851 GCTGACTAGGCTCCACTTGTC 60.405 57.143 0.00 0.00 41.52 3.18
391 392 0.888619 TGACTAGGCTCCACTTGTCG 59.111 55.000 0.00 0.00 43.21 4.35
392 393 0.889306 GACTAGGCTCCACTTGTCGT 59.111 55.000 0.00 0.00 34.53 4.34
393 394 0.889306 ACTAGGCTCCACTTGTCGTC 59.111 55.000 0.00 0.00 0.00 4.20
394 395 0.179161 CTAGGCTCCACTTGTCGTCG 60.179 60.000 0.00 0.00 0.00 5.12
395 396 0.892358 TAGGCTCCACTTGTCGTCGT 60.892 55.000 0.00 0.00 0.00 4.34
396 397 1.733399 GGCTCCACTTGTCGTCGTC 60.733 63.158 0.00 0.00 0.00 4.20
397 398 1.286260 GCTCCACTTGTCGTCGTCT 59.714 57.895 0.00 0.00 0.00 4.18
398 399 1.004277 GCTCCACTTGTCGTCGTCTG 61.004 60.000 0.00 0.00 0.00 3.51
399 400 0.591659 CTCCACTTGTCGTCGTCTGA 59.408 55.000 0.00 0.00 0.00 3.27
400 401 1.200252 CTCCACTTGTCGTCGTCTGAT 59.800 52.381 0.00 0.00 0.00 2.90
401 402 1.611977 TCCACTTGTCGTCGTCTGATT 59.388 47.619 0.00 0.00 0.00 2.57
402 403 1.721389 CCACTTGTCGTCGTCTGATTG 59.279 52.381 0.00 0.00 0.00 2.67
403 404 1.721389 CACTTGTCGTCGTCTGATTGG 59.279 52.381 0.00 0.00 0.00 3.16
404 405 0.716108 CTTGTCGTCGTCTGATTGGC 59.284 55.000 0.00 0.00 0.00 4.52
405 406 0.317160 TTGTCGTCGTCTGATTGGCT 59.683 50.000 0.00 0.00 0.00 4.75
406 407 1.170442 TGTCGTCGTCTGATTGGCTA 58.830 50.000 0.00 0.00 0.00 3.93
407 408 1.132453 TGTCGTCGTCTGATTGGCTAG 59.868 52.381 0.00 0.00 0.00 3.42
408 409 0.738975 TCGTCGTCTGATTGGCTAGG 59.261 55.000 0.00 0.00 0.00 3.02
409 410 0.738975 CGTCGTCTGATTGGCTAGGA 59.261 55.000 0.00 0.00 0.00 2.94
410 411 1.534175 CGTCGTCTGATTGGCTAGGAC 60.534 57.143 0.00 0.00 0.00 3.85
411 412 1.751924 GTCGTCTGATTGGCTAGGACT 59.248 52.381 0.00 0.00 0.00 3.85
412 413 2.950309 GTCGTCTGATTGGCTAGGACTA 59.050 50.000 0.00 0.00 0.00 2.59
413 414 3.380637 GTCGTCTGATTGGCTAGGACTAA 59.619 47.826 0.00 0.00 0.00 2.24
414 415 4.021229 TCGTCTGATTGGCTAGGACTAAA 58.979 43.478 0.00 0.00 0.00 1.85
415 416 4.649674 TCGTCTGATTGGCTAGGACTAAAT 59.350 41.667 0.00 0.00 0.00 1.40
416 417 5.128827 TCGTCTGATTGGCTAGGACTAAATT 59.871 40.000 0.00 0.00 0.00 1.82
417 418 5.817816 CGTCTGATTGGCTAGGACTAAATTT 59.182 40.000 0.00 0.00 0.00 1.82
418 419 6.238211 CGTCTGATTGGCTAGGACTAAATTTG 60.238 42.308 0.00 0.00 0.00 2.32
419 420 5.590259 TCTGATTGGCTAGGACTAAATTTGC 59.410 40.000 0.00 0.00 0.00 3.68
420 421 5.260424 TGATTGGCTAGGACTAAATTTGCA 58.740 37.500 0.00 0.00 0.00 4.08
421 422 5.125417 TGATTGGCTAGGACTAAATTTGCAC 59.875 40.000 0.00 0.00 0.00 4.57
422 423 4.027674 TGGCTAGGACTAAATTTGCACA 57.972 40.909 0.00 0.00 0.00 4.57
423 424 4.599041 TGGCTAGGACTAAATTTGCACAT 58.401 39.130 0.00 0.00 0.00 3.21
424 425 5.016173 TGGCTAGGACTAAATTTGCACATT 58.984 37.500 0.00 0.00 0.00 2.71
425 426 5.105797 TGGCTAGGACTAAATTTGCACATTG 60.106 40.000 0.00 0.00 0.00 2.82
426 427 5.125417 GGCTAGGACTAAATTTGCACATTGA 59.875 40.000 0.00 0.00 0.00 2.57
427 428 6.261118 GCTAGGACTAAATTTGCACATTGAG 58.739 40.000 8.21 8.21 0.00 3.02
428 429 6.127897 GCTAGGACTAAATTTGCACATTGAGT 60.128 38.462 14.35 14.35 31.26 3.41
440 441 3.061322 CACATTGAGTGCAATTTGTGGG 58.939 45.455 14.30 1.04 41.87 4.61
441 442 2.964464 ACATTGAGTGCAATTTGTGGGA 59.036 40.909 0.00 0.00 41.87 4.37
442 443 3.243839 ACATTGAGTGCAATTTGTGGGAC 60.244 43.478 0.00 0.00 41.87 4.46
443 444 2.363306 TGAGTGCAATTTGTGGGACT 57.637 45.000 0.00 0.00 38.47 3.85
444 445 2.997485 GAGTGCAATTTGTGGGACTC 57.003 50.000 0.00 0.00 43.54 3.36
445 446 2.363306 AGTGCAATTTGTGGGACTCA 57.637 45.000 0.00 0.00 28.92 3.41
446 447 2.665165 AGTGCAATTTGTGGGACTCAA 58.335 42.857 0.00 0.00 40.22 3.02
447 448 3.233507 AGTGCAATTTGTGGGACTCAAT 58.766 40.909 0.00 0.00 41.57 2.57
448 449 4.406456 AGTGCAATTTGTGGGACTCAATA 58.594 39.130 0.00 0.00 41.57 1.90
449 450 4.460382 AGTGCAATTTGTGGGACTCAATAG 59.540 41.667 0.00 0.00 41.57 1.73
450 451 4.218417 GTGCAATTTGTGGGACTCAATAGT 59.782 41.667 0.00 0.00 41.57 2.12
451 452 4.832266 TGCAATTTGTGGGACTCAATAGTT 59.168 37.500 0.00 0.00 41.57 2.24
452 453 5.163513 GCAATTTGTGGGACTCAATAGTTG 58.836 41.667 0.00 0.00 41.57 3.16
453 454 5.713025 CAATTTGTGGGACTCAATAGTTGG 58.287 41.667 0.00 0.00 41.57 3.77
454 455 2.489938 TGTGGGACTCAATAGTTGGC 57.510 50.000 0.00 0.00 35.56 4.52
455 456 1.985159 TGTGGGACTCAATAGTTGGCT 59.015 47.619 0.00 0.00 35.56 4.75
456 457 2.375174 TGTGGGACTCAATAGTTGGCTT 59.625 45.455 0.00 0.00 35.56 4.35
457 458 3.181434 TGTGGGACTCAATAGTTGGCTTT 60.181 43.478 0.00 0.00 35.56 3.51
458 459 3.826729 GTGGGACTCAATAGTTGGCTTTT 59.173 43.478 0.00 0.00 35.56 2.27
459 460 3.826157 TGGGACTCAATAGTTGGCTTTTG 59.174 43.478 0.00 0.00 35.56 2.44
460 461 3.367395 GGGACTCAATAGTTGGCTTTTGC 60.367 47.826 0.00 0.00 39.67 3.68
461 462 3.255642 GGACTCAATAGTTGGCTTTTGCA 59.744 43.478 0.00 0.00 41.31 4.08
462 463 4.261994 GGACTCAATAGTTGGCTTTTGCAA 60.262 41.667 0.00 0.00 41.31 4.08
463 464 4.874970 ACTCAATAGTTGGCTTTTGCAAG 58.125 39.130 0.00 0.00 39.23 4.01
464 465 4.342092 ACTCAATAGTTGGCTTTTGCAAGT 59.658 37.500 0.00 0.00 39.23 3.16
465 466 5.163416 ACTCAATAGTTGGCTTTTGCAAGTT 60.163 36.000 0.00 0.00 39.23 2.66
466 467 6.630188 ACTCAATAGTTGGCTTTTGCAAGTTT 60.630 34.615 0.00 0.00 39.23 2.66
467 468 8.062512 ACTCAATAGTTGGCTTTTGCAAGTTTT 61.063 33.333 0.00 0.00 39.23 2.43
474 475 4.676849 GCTTTTGCAAGTTTTGAACCAA 57.323 36.364 0.00 0.00 46.58 3.67
475 476 5.040715 GCTTTTGCAAGTTTTGAACCAAA 57.959 34.783 0.00 0.00 46.58 3.28
476 477 5.639757 GCTTTTGCAAGTTTTGAACCAAAT 58.360 33.333 0.00 0.00 46.58 2.32
477 478 5.738693 GCTTTTGCAAGTTTTGAACCAAATC 59.261 36.000 0.00 0.00 46.58 2.17
478 479 5.462034 TTTGCAAGTTTTGAACCAAATCG 57.538 34.783 0.00 0.00 33.19 3.34
479 480 4.116747 TGCAAGTTTTGAACCAAATCGT 57.883 36.364 0.00 0.00 33.19 3.73
480 481 4.109050 TGCAAGTTTTGAACCAAATCGTC 58.891 39.130 0.00 0.00 33.19 4.20
481 482 4.109050 GCAAGTTTTGAACCAAATCGTCA 58.891 39.130 0.00 0.00 33.19 4.35
482 483 4.744631 GCAAGTTTTGAACCAAATCGTCAT 59.255 37.500 0.00 0.00 33.19 3.06
483 484 5.918011 GCAAGTTTTGAACCAAATCGTCATA 59.082 36.000 0.00 0.00 33.19 2.15
484 485 6.586082 GCAAGTTTTGAACCAAATCGTCATAT 59.414 34.615 0.00 0.00 33.19 1.78
485 486 7.201350 GCAAGTTTTGAACCAAATCGTCATATC 60.201 37.037 0.00 0.00 33.19 1.63
486 487 7.687941 AGTTTTGAACCAAATCGTCATATCT 57.312 32.000 0.00 0.00 33.19 1.98
487 488 8.786826 AGTTTTGAACCAAATCGTCATATCTA 57.213 30.769 0.00 0.00 33.19 1.98
488 489 8.883731 AGTTTTGAACCAAATCGTCATATCTAG 58.116 33.333 0.00 0.00 33.19 2.43
489 490 8.879759 GTTTTGAACCAAATCGTCATATCTAGA 58.120 33.333 0.00 0.00 33.19 2.43
490 491 9.443323 TTTTGAACCAAATCGTCATATCTAGAA 57.557 29.630 0.00 0.00 33.19 2.10
491 492 8.420374 TTGAACCAAATCGTCATATCTAGAAC 57.580 34.615 0.00 0.00 0.00 3.01
492 493 7.552459 TGAACCAAATCGTCATATCTAGAACA 58.448 34.615 0.00 0.00 0.00 3.18
493 494 8.038351 TGAACCAAATCGTCATATCTAGAACAA 58.962 33.333 0.00 0.00 0.00 2.83
494 495 8.425577 AACCAAATCGTCATATCTAGAACAAG 57.574 34.615 0.00 0.00 0.00 3.16
495 496 7.556844 ACCAAATCGTCATATCTAGAACAAGT 58.443 34.615 0.00 0.00 0.00 3.16
496 497 8.041323 ACCAAATCGTCATATCTAGAACAAGTT 58.959 33.333 0.00 0.00 0.00 2.66
497 498 8.331022 CCAAATCGTCATATCTAGAACAAGTTG 58.669 37.037 0.00 0.00 0.00 3.16
498 499 8.873830 CAAATCGTCATATCTAGAACAAGTTGT 58.126 33.333 1.64 1.64 0.00 3.32
499 500 7.993821 ATCGTCATATCTAGAACAAGTTGTG 57.006 36.000 9.79 0.00 0.00 3.33
500 501 6.330278 TCGTCATATCTAGAACAAGTTGTGG 58.670 40.000 9.79 1.09 0.00 4.17
501 502 5.520288 CGTCATATCTAGAACAAGTTGTGGG 59.480 44.000 9.79 0.73 0.00 4.61
502 503 6.627287 CGTCATATCTAGAACAAGTTGTGGGA 60.627 42.308 9.79 6.16 0.00 4.37
503 504 6.535508 GTCATATCTAGAACAAGTTGTGGGAC 59.464 42.308 9.79 2.29 0.00 4.46
504 505 6.440647 TCATATCTAGAACAAGTTGTGGGACT 59.559 38.462 9.79 9.39 0.00 3.85
505 506 4.602340 TCTAGAACAAGTTGTGGGACTC 57.398 45.455 9.79 2.80 0.00 3.36
506 507 2.640316 AGAACAAGTTGTGGGACTCC 57.360 50.000 9.79 0.00 0.00 3.85
507 508 2.127708 AGAACAAGTTGTGGGACTCCT 58.872 47.619 9.79 0.00 0.00 3.69
508 509 2.158755 AGAACAAGTTGTGGGACTCCTG 60.159 50.000 9.79 0.00 0.00 3.86
509 510 0.474184 ACAAGTTGTGGGACTCCTGG 59.526 55.000 7.96 0.00 0.00 4.45
510 511 0.474184 CAAGTTGTGGGACTCCTGGT 59.526 55.000 0.00 0.00 0.00 4.00
511 512 0.474184 AAGTTGTGGGACTCCTGGTG 59.526 55.000 0.00 0.00 0.00 4.17
512 513 1.600916 GTTGTGGGACTCCTGGTGC 60.601 63.158 0.00 0.00 35.44 5.01
513 514 1.770110 TTGTGGGACTCCTGGTGCT 60.770 57.895 0.00 0.00 36.48 4.40
514 515 0.472925 TTGTGGGACTCCTGGTGCTA 60.473 55.000 0.00 0.00 36.48 3.49
515 516 0.252696 TGTGGGACTCCTGGTGCTAT 60.253 55.000 0.00 0.00 36.48 2.97
516 517 0.912486 GTGGGACTCCTGGTGCTATT 59.088 55.000 0.00 0.00 36.48 1.73
517 518 2.116238 GTGGGACTCCTGGTGCTATTA 58.884 52.381 0.00 0.00 36.48 0.98
518 519 2.116238 TGGGACTCCTGGTGCTATTAC 58.884 52.381 0.00 0.00 36.48 1.89
519 520 1.416772 GGGACTCCTGGTGCTATTACC 59.583 57.143 0.00 0.00 41.24 2.85
520 521 2.399580 GGACTCCTGGTGCTATTACCT 58.600 52.381 0.00 0.00 41.43 3.08
521 522 2.365941 GGACTCCTGGTGCTATTACCTC 59.634 54.545 0.00 0.00 41.43 3.85
522 523 2.365941 GACTCCTGGTGCTATTACCTCC 59.634 54.545 0.00 0.00 41.43 4.30
523 524 2.022918 ACTCCTGGTGCTATTACCTCCT 60.023 50.000 0.00 0.00 41.43 3.69
524 525 3.206866 ACTCCTGGTGCTATTACCTCCTA 59.793 47.826 0.00 0.00 41.43 2.94
525 526 4.140663 ACTCCTGGTGCTATTACCTCCTAT 60.141 45.833 0.00 0.00 41.43 2.57
526 527 4.827789 TCCTGGTGCTATTACCTCCTATT 58.172 43.478 0.00 0.00 41.43 1.73
527 528 5.224441 TCCTGGTGCTATTACCTCCTATTT 58.776 41.667 0.00 0.00 41.43 1.40
528 529 5.307196 TCCTGGTGCTATTACCTCCTATTTC 59.693 44.000 0.00 0.00 41.43 2.17
529 530 5.513267 CCTGGTGCTATTACCTCCTATTTCC 60.513 48.000 0.00 0.00 41.43 3.13
530 531 4.039973 TGGTGCTATTACCTCCTATTTCCG 59.960 45.833 0.00 0.00 41.43 4.30
531 532 4.562963 GGTGCTATTACCTCCTATTTCCGG 60.563 50.000 0.00 0.00 37.74 5.14
532 533 3.007614 TGCTATTACCTCCTATTTCCGGC 59.992 47.826 0.00 0.00 0.00 6.13
533 534 3.261137 GCTATTACCTCCTATTTCCGGCT 59.739 47.826 0.00 0.00 0.00 5.52
534 535 4.465305 GCTATTACCTCCTATTTCCGGCTA 59.535 45.833 0.00 0.00 0.00 3.93
535 536 4.886496 ATTACCTCCTATTTCCGGCTAC 57.114 45.455 0.00 0.00 0.00 3.58
536 537 2.473576 ACCTCCTATTTCCGGCTACT 57.526 50.000 0.00 0.00 0.00 2.57
537 538 3.607490 ACCTCCTATTTCCGGCTACTA 57.393 47.619 0.00 0.00 0.00 1.82
538 539 3.229293 ACCTCCTATTTCCGGCTACTAC 58.771 50.000 0.00 0.00 0.00 2.73
539 540 3.117208 ACCTCCTATTTCCGGCTACTACT 60.117 47.826 0.00 0.00 0.00 2.57
540 541 4.105377 ACCTCCTATTTCCGGCTACTACTA 59.895 45.833 0.00 0.00 0.00 1.82
541 542 4.701171 CCTCCTATTTCCGGCTACTACTAG 59.299 50.000 0.00 0.00 0.00 2.57
542 543 4.660168 TCCTATTTCCGGCTACTACTAGG 58.340 47.826 0.00 0.24 0.00 3.02
543 544 3.193056 CCTATTTCCGGCTACTACTAGGC 59.807 52.174 0.00 0.00 41.27 3.93
544 545 2.148446 TTTCCGGCTACTACTAGGCA 57.852 50.000 0.00 0.00 44.24 4.75
545 546 1.396653 TTCCGGCTACTACTAGGCAC 58.603 55.000 0.00 0.00 44.24 5.01
546 547 0.549950 TCCGGCTACTACTAGGCACT 59.450 55.000 0.00 0.00 44.24 4.40
547 548 1.770658 TCCGGCTACTACTAGGCACTA 59.229 52.381 0.00 0.00 44.24 2.74
619 628 2.280457 GCGGCTGGCAGGATAGTC 60.280 66.667 17.64 0.00 42.87 2.59
624 633 1.109920 GCTGGCAGGATAGTCGAGGA 61.110 60.000 17.64 0.00 0.00 3.71
625 634 1.403814 CTGGCAGGATAGTCGAGGAA 58.596 55.000 6.61 0.00 0.00 3.36
626 635 1.339610 CTGGCAGGATAGTCGAGGAAG 59.660 57.143 6.61 0.00 0.00 3.46
627 636 0.032815 GGCAGGATAGTCGAGGAAGC 59.967 60.000 0.00 0.00 0.00 3.86
628 637 1.036707 GCAGGATAGTCGAGGAAGCT 58.963 55.000 0.00 0.00 0.00 3.74
693 705 3.349006 CGGCAAACTGCGACTGCT 61.349 61.111 0.00 0.00 46.21 4.24
777 791 2.215942 TTTAAGCTGGCCCTTCCTTC 57.784 50.000 0.00 0.00 35.26 3.46
878 928 1.626654 CGCACCAACTCGTAGCCAAG 61.627 60.000 0.00 0.00 0.00 3.61
938 998 0.108424 CGCTCCAAGTCAAGCTAGCT 60.108 55.000 12.68 12.68 36.35 3.32
960 1020 2.526120 CGCGAAGAATTCTCCGGGC 61.526 63.158 17.58 12.60 44.75 6.13
1155 1215 2.027625 CTCCAACAACGACGCCCTC 61.028 63.158 0.00 0.00 0.00 4.30
1524 1611 4.129737 CCGATGTGGACGACCGCT 62.130 66.667 17.96 4.31 45.89 5.52
1525 1612 2.126071 CGATGTGGACGACCGCTT 60.126 61.111 17.96 11.95 45.89 4.68
1641 1734 3.479269 GTGGAGAACTTCGGCGCG 61.479 66.667 0.00 0.00 0.00 6.86
1853 1987 4.993705 TGGACCTCCATTTGTAACTCTT 57.006 40.909 0.00 0.00 42.01 2.85
1987 2123 1.580815 CTAGCTAGCTTGCTTGCTCC 58.419 55.000 28.30 3.97 42.97 4.70
1988 2124 0.179000 TAGCTAGCTTGCTTGCTCCC 59.821 55.000 28.30 3.66 42.97 4.30
1989 2125 2.117779 GCTAGCTTGCTTGCTCCCC 61.118 63.158 18.66 0.00 42.97 4.81
1993 2129 2.564721 GCTTGCTTGCTCCCCGTTT 61.565 57.895 0.00 0.00 0.00 3.60
1994 2130 2.041153 CTTGCTTGCTCCCCGTTTT 58.959 52.632 0.00 0.00 0.00 2.43
1995 2131 0.389025 CTTGCTTGCTCCCCGTTTTT 59.611 50.000 0.00 0.00 0.00 1.94
2041 2187 4.460948 AATGGCTTCCTGTAATTTGCAG 57.539 40.909 7.45 7.45 0.00 4.41
2042 2188 1.545582 TGGCTTCCTGTAATTTGCAGC 59.454 47.619 8.80 0.00 32.93 5.25
2046 2192 3.057315 GCTTCCTGTAATTTGCAGCAAGA 60.057 43.478 18.80 5.39 34.56 3.02
2047 2193 4.559300 GCTTCCTGTAATTTGCAGCAAGAA 60.559 41.667 18.80 11.49 34.56 2.52
2048 2194 4.771590 TCCTGTAATTTGCAGCAAGAAG 57.228 40.909 8.12 3.23 32.93 2.85
2049 2195 3.507233 TCCTGTAATTTGCAGCAAGAAGG 59.493 43.478 8.12 11.57 32.93 3.46
2050 2196 3.256631 CCTGTAATTTGCAGCAAGAAGGT 59.743 43.478 8.12 0.00 32.93 3.50
2052 2198 5.392380 CCTGTAATTTGCAGCAAGAAGGTAG 60.392 44.000 8.12 4.48 32.93 3.18
2054 2200 6.234920 TGTAATTTGCAGCAAGAAGGTAGTA 58.765 36.000 8.12 0.00 0.00 1.82
2056 2202 3.762407 TTGCAGCAAGAAGGTAGTACA 57.238 42.857 2.83 0.00 0.00 2.90
2057 2203 3.762407 TGCAGCAAGAAGGTAGTACAA 57.238 42.857 2.06 0.00 0.00 2.41
2058 2204 4.079980 TGCAGCAAGAAGGTAGTACAAA 57.920 40.909 2.06 0.00 0.00 2.83
2060 2206 5.070001 TGCAGCAAGAAGGTAGTACAAATT 58.930 37.500 2.06 0.00 0.00 1.82
2093 2239 6.543465 CCATGTGGACTTATTGAGCTTATCAA 59.457 38.462 0.00 0.00 44.55 2.57
2132 2294 5.873179 AAAATTTTGCATGCCATCTCAAG 57.127 34.783 16.68 0.00 0.00 3.02
2137 2299 4.603989 TTGCATGCCATCTCAAGAAAAA 57.396 36.364 16.68 0.00 0.00 1.94
2138 2300 4.182693 TGCATGCCATCTCAAGAAAAAG 57.817 40.909 16.68 0.00 0.00 2.27
2139 2301 3.827876 TGCATGCCATCTCAAGAAAAAGA 59.172 39.130 16.68 0.00 0.00 2.52
2140 2302 4.281435 TGCATGCCATCTCAAGAAAAAGAA 59.719 37.500 16.68 0.00 0.00 2.52
2141 2303 4.863131 GCATGCCATCTCAAGAAAAAGAAG 59.137 41.667 6.36 0.00 0.00 2.85
2142 2304 4.510038 TGCCATCTCAAGAAAAAGAAGC 57.490 40.909 0.00 0.00 0.00 3.86
2143 2305 3.890756 TGCCATCTCAAGAAAAAGAAGCA 59.109 39.130 0.00 0.00 34.43 3.91
2144 2306 4.341806 TGCCATCTCAAGAAAAAGAAGCAA 59.658 37.500 0.00 0.00 34.10 3.91
2145 2307 5.163426 TGCCATCTCAAGAAAAAGAAGCAAA 60.163 36.000 0.00 0.00 34.10 3.68
2146 2308 5.754890 GCCATCTCAAGAAAAAGAAGCAAAA 59.245 36.000 0.00 0.00 0.00 2.44
2147 2309 6.426025 GCCATCTCAAGAAAAAGAAGCAAAAT 59.574 34.615 0.00 0.00 0.00 1.82
2148 2310 7.041576 GCCATCTCAAGAAAAAGAAGCAAAATT 60.042 33.333 0.00 0.00 0.00 1.82
2149 2311 9.480053 CCATCTCAAGAAAAAGAAGCAAAATTA 57.520 29.630 0.00 0.00 0.00 1.40
2171 2340 9.515020 AATTATGTCACTTTAATTTACCATGCG 57.485 29.630 0.00 0.00 0.00 4.73
2268 2438 1.226746 GGCCAACACTGCCGTATATC 58.773 55.000 0.00 0.00 39.48 1.63
2365 2535 1.250328 TTGCTTTGCACAGAGATGGG 58.750 50.000 3.47 0.00 38.71 4.00
2462 2632 5.088141 TGATAGTAGTAACTTAGTCGCGC 57.912 43.478 0.00 0.00 37.15 6.86
2556 2729 5.505324 GCATTGTAATCTCAGGCAGAATGTC 60.505 44.000 0.00 0.00 44.67 3.06
2598 2771 1.820519 GCTTGCCTCAATCATGGTTGA 59.179 47.619 20.02 20.02 36.70 3.18
2615 2788 5.063204 TGGTTGATTTCTTCATTGACGTCT 58.937 37.500 17.92 0.00 33.34 4.18
2624 2797 5.116180 TCTTCATTGACGTCTCACAGTTTT 58.884 37.500 17.92 0.00 0.00 2.43
2673 2849 9.700831 AATATAAAATCAGTCCTTACAAGGCTT 57.299 29.630 2.93 0.00 46.06 4.35
2674 2850 5.966742 AAAATCAGTCCTTACAAGGCTTC 57.033 39.130 0.00 0.00 46.06 3.86
2675 2851 3.636153 ATCAGTCCTTACAAGGCTTCC 57.364 47.619 0.00 0.00 46.06 3.46
2676 2852 1.275291 TCAGTCCTTACAAGGCTTCCG 59.725 52.381 0.00 0.00 46.06 4.30
2677 2853 0.613777 AGTCCTTACAAGGCTTCCGG 59.386 55.000 0.00 0.00 46.06 5.14
2678 2854 1.025113 GTCCTTACAAGGCTTCCGGC 61.025 60.000 0.00 0.00 46.06 6.13
2687 2863 2.736670 AGGCTTCCGGCTTTTGATAT 57.263 45.000 0.00 0.00 44.74 1.63
2688 2864 3.018423 AGGCTTCCGGCTTTTGATATT 57.982 42.857 0.00 0.00 44.74 1.28
2689 2865 4.164843 AGGCTTCCGGCTTTTGATATTA 57.835 40.909 0.00 0.00 44.74 0.98
2690 2866 4.137543 AGGCTTCCGGCTTTTGATATTAG 58.862 43.478 0.00 0.00 44.74 1.73
2691 2867 3.253432 GGCTTCCGGCTTTTGATATTAGG 59.747 47.826 0.00 0.00 41.46 2.69
2692 2868 3.304726 GCTTCCGGCTTTTGATATTAGGC 60.305 47.826 0.00 0.00 38.06 3.93
2693 2869 3.857157 TCCGGCTTTTGATATTAGGCT 57.143 42.857 0.00 0.00 32.77 4.58
2694 2870 4.164843 TCCGGCTTTTGATATTAGGCTT 57.835 40.909 0.00 0.00 32.77 4.35
2695 2871 5.298989 TCCGGCTTTTGATATTAGGCTTA 57.701 39.130 0.00 0.00 32.77 3.09
2696 2872 5.305585 TCCGGCTTTTGATATTAGGCTTAG 58.694 41.667 0.00 0.00 32.77 2.18
2697 2873 4.455877 CCGGCTTTTGATATTAGGCTTAGG 59.544 45.833 0.00 0.00 32.77 2.69
2698 2874 5.063880 CGGCTTTTGATATTAGGCTTAGGT 58.936 41.667 0.00 0.00 32.77 3.08
2699 2875 5.049405 CGGCTTTTGATATTAGGCTTAGGTG 60.049 44.000 0.00 0.00 32.77 4.00
2700 2876 6.062095 GGCTTTTGATATTAGGCTTAGGTGA 58.938 40.000 0.00 0.00 0.00 4.02
2701 2877 6.205658 GGCTTTTGATATTAGGCTTAGGTGAG 59.794 42.308 0.00 0.00 0.00 3.51
2702 2878 6.768381 GCTTTTGATATTAGGCTTAGGTGAGT 59.232 38.462 0.00 0.00 0.00 3.41
2703 2879 7.254932 GCTTTTGATATTAGGCTTAGGTGAGTG 60.255 40.741 0.00 0.00 0.00 3.51
2704 2880 5.808366 TGATATTAGGCTTAGGTGAGTGG 57.192 43.478 0.00 0.00 0.00 4.00
2705 2881 5.216622 TGATATTAGGCTTAGGTGAGTGGT 58.783 41.667 0.00 0.00 0.00 4.16
2706 2882 5.665812 TGATATTAGGCTTAGGTGAGTGGTT 59.334 40.000 0.00 0.00 0.00 3.67
2707 2883 4.929146 ATTAGGCTTAGGTGAGTGGTTT 57.071 40.909 0.00 0.00 0.00 3.27
2708 2884 2.568623 AGGCTTAGGTGAGTGGTTTG 57.431 50.000 0.00 0.00 0.00 2.93
2709 2885 1.073923 AGGCTTAGGTGAGTGGTTTGG 59.926 52.381 0.00 0.00 0.00 3.28
2710 2886 1.534729 GCTTAGGTGAGTGGTTTGGG 58.465 55.000 0.00 0.00 0.00 4.12
2711 2887 1.202891 GCTTAGGTGAGTGGTTTGGGT 60.203 52.381 0.00 0.00 0.00 4.51
2712 2888 2.039348 GCTTAGGTGAGTGGTTTGGGTA 59.961 50.000 0.00 0.00 0.00 3.69
2713 2889 3.868754 GCTTAGGTGAGTGGTTTGGGTAG 60.869 52.174 0.00 0.00 0.00 3.18
2714 2890 1.815757 AGGTGAGTGGTTTGGGTAGT 58.184 50.000 0.00 0.00 0.00 2.73
2715 2891 1.420138 AGGTGAGTGGTTTGGGTAGTG 59.580 52.381 0.00 0.00 0.00 2.74
2716 2892 1.544759 GGTGAGTGGTTTGGGTAGTGG 60.545 57.143 0.00 0.00 0.00 4.00
2717 2893 0.109723 TGAGTGGTTTGGGTAGTGGC 59.890 55.000 0.00 0.00 0.00 5.01
2718 2894 0.608308 GAGTGGTTTGGGTAGTGGCC 60.608 60.000 0.00 0.00 0.00 5.36
2719 2895 1.065997 AGTGGTTTGGGTAGTGGCCT 61.066 55.000 3.32 0.00 0.00 5.19
2720 2896 0.694196 GTGGTTTGGGTAGTGGCCTA 59.306 55.000 3.32 0.00 0.00 3.93
2721 2897 0.988832 TGGTTTGGGTAGTGGCCTAG 59.011 55.000 3.32 0.00 0.00 3.02
2722 2898 0.393944 GGTTTGGGTAGTGGCCTAGC 60.394 60.000 3.32 0.00 40.26 3.42
2723 2899 0.618981 GTTTGGGTAGTGGCCTAGCT 59.381 55.000 3.32 1.96 40.70 3.32
2724 2900 1.835531 GTTTGGGTAGTGGCCTAGCTA 59.164 52.381 3.32 0.87 40.70 3.32
2725 2901 1.789523 TTGGGTAGTGGCCTAGCTAG 58.210 55.000 14.20 14.20 40.70 3.42
2726 2902 0.759436 TGGGTAGTGGCCTAGCTAGC 60.759 60.000 15.74 6.62 40.70 3.42
2727 2903 0.759436 GGGTAGTGGCCTAGCTAGCA 60.759 60.000 18.83 6.10 40.70 3.49
2728 2904 0.389757 GGTAGTGGCCTAGCTAGCAC 59.610 60.000 18.83 17.45 38.39 4.40
2729 2905 0.389757 GTAGTGGCCTAGCTAGCACC 59.610 60.000 21.16 20.25 0.00 5.01
2730 2906 0.759436 TAGTGGCCTAGCTAGCACCC 60.759 60.000 21.16 17.35 0.00 4.61
2731 2907 2.768344 TGGCCTAGCTAGCACCCC 60.768 66.667 18.83 15.75 0.00 4.95
2732 2908 2.446802 GGCCTAGCTAGCACCCCT 60.447 66.667 18.83 0.00 0.00 4.79
2733 2909 2.073101 GGCCTAGCTAGCACCCCTT 61.073 63.158 18.83 0.00 0.00 3.95
2734 2910 1.448069 GCCTAGCTAGCACCCCTTC 59.552 63.158 18.83 0.00 0.00 3.46
2735 2911 1.338136 GCCTAGCTAGCACCCCTTCA 61.338 60.000 18.83 0.00 0.00 3.02
2736 2912 1.428869 CCTAGCTAGCACCCCTTCAT 58.571 55.000 18.83 0.00 0.00 2.57
2737 2913 1.346068 CCTAGCTAGCACCCCTTCATC 59.654 57.143 18.83 0.00 0.00 2.92
2738 2914 2.042464 CTAGCTAGCACCCCTTCATCA 58.958 52.381 18.83 0.00 0.00 3.07
2739 2915 1.516110 AGCTAGCACCCCTTCATCAT 58.484 50.000 18.83 0.00 0.00 2.45
2740 2916 2.694397 AGCTAGCACCCCTTCATCATA 58.306 47.619 18.83 0.00 0.00 2.15
2741 2917 3.254960 AGCTAGCACCCCTTCATCATAT 58.745 45.455 18.83 0.00 0.00 1.78
2742 2918 3.008813 AGCTAGCACCCCTTCATCATATG 59.991 47.826 18.83 0.00 0.00 1.78
2743 2919 2.965671 AGCACCCCTTCATCATATGG 57.034 50.000 2.13 0.00 0.00 2.74
2744 2920 2.421725 AGCACCCCTTCATCATATGGA 58.578 47.619 2.13 0.00 0.00 3.41
2745 2921 2.991713 AGCACCCCTTCATCATATGGAT 59.008 45.455 2.13 0.00 36.39 3.41
2746 2922 4.178339 AGCACCCCTTCATCATATGGATA 58.822 43.478 2.13 0.00 33.95 2.59
2747 2923 4.226846 AGCACCCCTTCATCATATGGATAG 59.773 45.833 2.13 0.00 33.95 2.08
2748 2924 4.627255 GCACCCCTTCATCATATGGATAGG 60.627 50.000 2.13 5.20 33.95 2.57
2749 2925 4.784838 CACCCCTTCATCATATGGATAGGA 59.215 45.833 2.13 0.00 33.95 2.94
2750 2926 5.035556 ACCCCTTCATCATATGGATAGGAG 58.964 45.833 2.13 0.00 33.95 3.69
2751 2927 4.141528 CCCCTTCATCATATGGATAGGAGC 60.142 50.000 2.13 0.00 33.95 4.70
2752 2928 4.472470 CCCTTCATCATATGGATAGGAGCA 59.528 45.833 2.13 0.00 33.95 4.26
2753 2929 5.045359 CCCTTCATCATATGGATAGGAGCAA 60.045 44.000 2.13 0.00 33.95 3.91
2754 2930 6.353689 CCCTTCATCATATGGATAGGAGCAAT 60.354 42.308 2.13 0.00 33.95 3.56
2755 2931 6.542735 CCTTCATCATATGGATAGGAGCAATG 59.457 42.308 2.13 0.00 33.95 2.82
2756 2932 5.997843 TCATCATATGGATAGGAGCAATGG 58.002 41.667 2.13 0.00 33.95 3.16
2757 2933 4.226427 TCATATGGATAGGAGCAATGGC 57.774 45.455 2.13 0.00 41.61 4.40
2758 2934 3.588396 TCATATGGATAGGAGCAATGGCA 59.412 43.478 2.13 0.00 44.61 4.92
2759 2935 4.228895 TCATATGGATAGGAGCAATGGCAT 59.771 41.667 2.13 0.00 44.61 4.40
2760 2936 5.429435 TCATATGGATAGGAGCAATGGCATA 59.571 40.000 0.00 0.00 44.61 3.14
2761 2937 4.875578 ATGGATAGGAGCAATGGCATAT 57.124 40.909 0.00 0.00 44.61 1.78
2762 2938 3.959293 TGGATAGGAGCAATGGCATATG 58.041 45.455 0.00 0.00 44.61 1.78
2763 2939 3.331591 TGGATAGGAGCAATGGCATATGT 59.668 43.478 0.00 0.00 44.61 2.29
2764 2940 4.202599 TGGATAGGAGCAATGGCATATGTT 60.203 41.667 0.00 0.00 44.61 2.71
2765 2941 4.157289 GGATAGGAGCAATGGCATATGTTG 59.843 45.833 0.00 2.51 44.61 3.33
2776 2952 3.088194 GCATATGTTGCCAAGATGGTG 57.912 47.619 4.29 0.00 46.15 4.17
2777 2953 2.223876 GCATATGTTGCCAAGATGGTGG 60.224 50.000 4.29 0.00 46.15 4.61
2778 2954 3.289836 CATATGTTGCCAAGATGGTGGA 58.710 45.455 0.00 0.00 41.65 4.02
2779 2955 2.537633 ATGTTGCCAAGATGGTGGAT 57.462 45.000 0.00 0.00 41.65 3.41
2780 2956 2.307496 TGTTGCCAAGATGGTGGATT 57.693 45.000 0.00 0.00 41.65 3.01
2781 2957 2.170166 TGTTGCCAAGATGGTGGATTC 58.830 47.619 0.00 0.00 41.65 2.52
2782 2958 2.170166 GTTGCCAAGATGGTGGATTCA 58.830 47.619 0.00 0.00 41.65 2.57
2783 2959 2.133281 TGCCAAGATGGTGGATTCAG 57.867 50.000 0.00 0.00 41.65 3.02
2784 2960 1.341285 TGCCAAGATGGTGGATTCAGG 60.341 52.381 0.00 0.00 41.65 3.86
2785 2961 1.341383 GCCAAGATGGTGGATTCAGGT 60.341 52.381 0.00 0.00 41.65 4.00
2786 2962 2.092429 GCCAAGATGGTGGATTCAGGTA 60.092 50.000 0.00 0.00 41.65 3.08
2787 2963 3.435601 GCCAAGATGGTGGATTCAGGTAT 60.436 47.826 0.00 0.00 41.65 2.73
2788 2964 4.202461 GCCAAGATGGTGGATTCAGGTATA 60.202 45.833 0.00 0.00 41.65 1.47
2789 2965 5.515534 GCCAAGATGGTGGATTCAGGTATAT 60.516 44.000 0.00 0.00 41.65 0.86
2790 2966 6.546484 CCAAGATGGTGGATTCAGGTATATT 58.454 40.000 0.00 0.00 41.65 1.28
2791 2967 6.432162 CCAAGATGGTGGATTCAGGTATATTG 59.568 42.308 0.00 0.00 41.65 1.90
2792 2968 6.770286 AGATGGTGGATTCAGGTATATTGT 57.230 37.500 0.00 0.00 0.00 2.71
2793 2969 7.154191 AGATGGTGGATTCAGGTATATTGTT 57.846 36.000 0.00 0.00 0.00 2.83
2794 2970 7.586349 AGATGGTGGATTCAGGTATATTGTTT 58.414 34.615 0.00 0.00 0.00 2.83
2795 2971 7.503566 AGATGGTGGATTCAGGTATATTGTTTG 59.496 37.037 0.00 0.00 0.00 2.93
2796 2972 6.489603 TGGTGGATTCAGGTATATTGTTTGT 58.510 36.000 0.00 0.00 0.00 2.83
2797 2973 7.634718 TGGTGGATTCAGGTATATTGTTTGTA 58.365 34.615 0.00 0.00 0.00 2.41
2798 2974 8.110271 TGGTGGATTCAGGTATATTGTTTGTAA 58.890 33.333 0.00 0.00 0.00 2.41
2799 2975 9.131791 GGTGGATTCAGGTATATTGTTTGTAAT 57.868 33.333 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
155 156 1.341156 AATTGAGGAGAGGGAGGGCG 61.341 60.000 0.00 0.00 0.00 6.13
156 157 0.922626 AAATTGAGGAGAGGGAGGGC 59.077 55.000 0.00 0.00 0.00 5.19
157 158 2.172293 CAGAAATTGAGGAGAGGGAGGG 59.828 54.545 0.00 0.00 0.00 4.30
158 159 3.110705 TCAGAAATTGAGGAGAGGGAGG 58.889 50.000 0.00 0.00 0.00 4.30
159 160 3.430098 CGTCAGAAATTGAGGAGAGGGAG 60.430 52.174 0.00 0.00 42.85 4.30
160 161 2.497675 CGTCAGAAATTGAGGAGAGGGA 59.502 50.000 0.00 0.00 42.85 4.20
161 162 2.419297 CCGTCAGAAATTGAGGAGAGGG 60.419 54.545 0.00 0.00 42.85 4.30
162 163 2.497675 TCCGTCAGAAATTGAGGAGAGG 59.502 50.000 0.00 0.00 42.85 3.69
163 164 3.876274 TCCGTCAGAAATTGAGGAGAG 57.124 47.619 0.00 0.00 42.85 3.20
164 165 4.026744 AGATCCGTCAGAAATTGAGGAGA 58.973 43.478 0.00 0.00 42.85 3.71
165 166 4.399004 AGATCCGTCAGAAATTGAGGAG 57.601 45.455 0.00 0.00 42.85 3.69
166 167 4.507710 CAAGATCCGTCAGAAATTGAGGA 58.492 43.478 0.00 0.00 42.85 3.71
167 168 3.064545 GCAAGATCCGTCAGAAATTGAGG 59.935 47.826 0.00 0.00 40.53 3.86
168 169 3.937706 AGCAAGATCCGTCAGAAATTGAG 59.062 43.478 0.00 0.00 36.21 3.02
169 170 3.686241 CAGCAAGATCCGTCAGAAATTGA 59.314 43.478 0.00 0.00 0.00 2.57
170 171 3.181503 CCAGCAAGATCCGTCAGAAATTG 60.182 47.826 0.00 0.00 0.00 2.32
171 172 3.012518 CCAGCAAGATCCGTCAGAAATT 58.987 45.455 0.00 0.00 0.00 1.82
172 173 2.026822 ACCAGCAAGATCCGTCAGAAAT 60.027 45.455 0.00 0.00 0.00 2.17
173 174 1.347707 ACCAGCAAGATCCGTCAGAAA 59.652 47.619 0.00 0.00 0.00 2.52
174 175 0.976641 ACCAGCAAGATCCGTCAGAA 59.023 50.000 0.00 0.00 0.00 3.02
175 176 0.532573 GACCAGCAAGATCCGTCAGA 59.467 55.000 0.00 0.00 0.00 3.27
176 177 0.534412 AGACCAGCAAGATCCGTCAG 59.466 55.000 0.00 0.00 0.00 3.51
177 178 0.247460 CAGACCAGCAAGATCCGTCA 59.753 55.000 0.00 0.00 0.00 4.35
178 179 0.247736 ACAGACCAGCAAGATCCGTC 59.752 55.000 0.00 0.00 0.00 4.79
179 180 0.247736 GACAGACCAGCAAGATCCGT 59.752 55.000 0.00 0.00 0.00 4.69
180 181 0.803768 CGACAGACCAGCAAGATCCG 60.804 60.000 0.00 0.00 0.00 4.18
181 182 1.086634 GCGACAGACCAGCAAGATCC 61.087 60.000 0.00 0.00 0.00 3.36
182 183 1.086634 GGCGACAGACCAGCAAGATC 61.087 60.000 0.00 0.00 0.00 2.75
183 184 1.078848 GGCGACAGACCAGCAAGAT 60.079 57.895 0.00 0.00 0.00 2.40
184 185 2.343758 GGCGACAGACCAGCAAGA 59.656 61.111 0.00 0.00 0.00 3.02
185 186 3.114616 CGGCGACAGACCAGCAAG 61.115 66.667 0.00 0.00 0.00 4.01
186 187 4.680237 CCGGCGACAGACCAGCAA 62.680 66.667 9.30 0.00 0.00 3.91
189 190 3.991051 ACACCGGCGACAGACCAG 61.991 66.667 9.30 0.00 0.00 4.00
190 191 4.293648 CACACCGGCGACAGACCA 62.294 66.667 9.30 0.00 0.00 4.02
191 192 3.916392 CTCACACCGGCGACAGACC 62.916 68.421 9.30 0.00 0.00 3.85
192 193 2.430921 CTCACACCGGCGACAGAC 60.431 66.667 9.30 0.00 0.00 3.51
193 194 2.596338 TCTCACACCGGCGACAGA 60.596 61.111 9.30 0.00 0.00 3.41
194 195 2.430921 GTCTCACACCGGCGACAG 60.431 66.667 9.30 0.00 0.00 3.51
195 196 3.207547 CTGTCTCACACCGGCGACA 62.208 63.158 9.30 6.17 35.35 4.35
196 197 2.430921 CTGTCTCACACCGGCGAC 60.431 66.667 9.30 1.15 0.00 5.19
197 198 2.596338 TCTGTCTCACACCGGCGA 60.596 61.111 9.30 0.00 0.00 5.54
198 199 2.126307 CTCTGTCTCACACCGGCG 60.126 66.667 0.00 0.00 0.00 6.46
199 200 2.433318 GCTCTGTCTCACACCGGC 60.433 66.667 0.00 0.00 0.00 6.13
200 201 1.080230 CAGCTCTGTCTCACACCGG 60.080 63.158 0.00 0.00 0.00 5.28
201 202 1.735920 GCAGCTCTGTCTCACACCG 60.736 63.158 0.00 0.00 0.00 4.94
202 203 0.669932 CAGCAGCTCTGTCTCACACC 60.670 60.000 0.00 0.00 38.02 4.16
203 204 0.669932 CCAGCAGCTCTGTCTCACAC 60.670 60.000 0.00 0.00 41.25 3.82
204 205 1.670015 CCAGCAGCTCTGTCTCACA 59.330 57.895 0.00 0.00 41.25 3.58
205 206 1.079266 CCCAGCAGCTCTGTCTCAC 60.079 63.158 0.00 0.00 41.25 3.51
206 207 2.288778 CCCCAGCAGCTCTGTCTCA 61.289 63.158 0.00 0.00 41.25 3.27
207 208 2.583520 CCCCAGCAGCTCTGTCTC 59.416 66.667 0.00 0.00 41.25 3.36
208 209 3.715097 GCCCCAGCAGCTCTGTCT 61.715 66.667 0.00 0.00 41.25 3.41
209 210 4.792804 GGCCCCAGCAGCTCTGTC 62.793 72.222 0.00 0.00 41.25 3.51
225 226 4.847516 TCCGATCTGCGTTCGCGG 62.848 66.667 18.26 18.26 43.11 6.46
226 227 3.315521 CTCCGATCTGCGTTCGCG 61.316 66.667 12.35 0.00 44.73 5.87
227 228 2.956964 CCTCCGATCTGCGTTCGC 60.957 66.667 10.34 10.34 38.67 4.70
228 229 2.278857 CCCTCCGATCTGCGTTCG 60.279 66.667 0.00 3.19 38.67 3.95
229 230 0.528684 CTTCCCTCCGATCTGCGTTC 60.529 60.000 0.00 0.00 38.67 3.95
230 231 1.517832 CTTCCCTCCGATCTGCGTT 59.482 57.895 0.00 0.00 38.67 4.84
231 232 2.427245 CCTTCCCTCCGATCTGCGT 61.427 63.158 0.00 0.00 38.67 5.24
232 233 2.419198 CCTTCCCTCCGATCTGCG 59.581 66.667 0.00 0.00 40.47 5.18
233 234 2.812619 CCCCTTCCCTCCGATCTGC 61.813 68.421 0.00 0.00 0.00 4.26
234 235 2.143419 CCCCCTTCCCTCCGATCTG 61.143 68.421 0.00 0.00 0.00 2.90
235 236 2.287251 CCCCCTTCCCTCCGATCT 59.713 66.667 0.00 0.00 0.00 2.75
249 250 2.041265 TCCCTCTCTGCTTCCCCC 59.959 66.667 0.00 0.00 0.00 5.40
250 251 2.741055 GCTCCCTCTCTGCTTCCCC 61.741 68.421 0.00 0.00 0.00 4.81
251 252 1.970352 CTGCTCCCTCTCTGCTTCCC 61.970 65.000 0.00 0.00 0.00 3.97
252 253 0.975040 TCTGCTCCCTCTCTGCTTCC 60.975 60.000 0.00 0.00 0.00 3.46
253 254 0.461135 CTCTGCTCCCTCTCTGCTTC 59.539 60.000 0.00 0.00 0.00 3.86
254 255 0.977108 CCTCTGCTCCCTCTCTGCTT 60.977 60.000 0.00 0.00 0.00 3.91
255 256 1.381599 CCTCTGCTCCCTCTCTGCT 60.382 63.158 0.00 0.00 0.00 4.24
256 257 2.433994 CCCTCTGCTCCCTCTCTGC 61.434 68.421 0.00 0.00 0.00 4.26
257 258 1.761667 CCCCTCTGCTCCCTCTCTG 60.762 68.421 0.00 0.00 0.00 3.35
258 259 2.695597 CCCCTCTGCTCCCTCTCT 59.304 66.667 0.00 0.00 0.00 3.10
259 260 2.445654 CCCCCTCTGCTCCCTCTC 60.446 72.222 0.00 0.00 0.00 3.20
260 261 2.955246 TCCCCCTCTGCTCCCTCT 60.955 66.667 0.00 0.00 0.00 3.69
261 262 2.445654 CTCCCCCTCTGCTCCCTC 60.446 72.222 0.00 0.00 0.00 4.30
262 263 3.288381 ACTCCCCCTCTGCTCCCT 61.288 66.667 0.00 0.00 0.00 4.20
263 264 3.086600 CACTCCCCCTCTGCTCCC 61.087 72.222 0.00 0.00 0.00 4.30
264 265 3.086600 CCACTCCCCCTCTGCTCC 61.087 72.222 0.00 0.00 0.00 4.70
265 266 3.086600 CCCACTCCCCCTCTGCTC 61.087 72.222 0.00 0.00 0.00 4.26
266 267 3.947041 ACCCACTCCCCCTCTGCT 61.947 66.667 0.00 0.00 0.00 4.24
267 268 3.721706 CACCCACTCCCCCTCTGC 61.722 72.222 0.00 0.00 0.00 4.26
268 269 3.011517 CCACCCACTCCCCCTCTG 61.012 72.222 0.00 0.00 0.00 3.35
269 270 3.208592 TCCACCCACTCCCCCTCT 61.209 66.667 0.00 0.00 0.00 3.69
270 271 2.689034 CTCCACCCACTCCCCCTC 60.689 72.222 0.00 0.00 0.00 4.30
275 276 3.775654 CTCCGCTCCACCCACTCC 61.776 72.222 0.00 0.00 0.00 3.85
276 277 2.680352 TCTCCGCTCCACCCACTC 60.680 66.667 0.00 0.00 0.00 3.51
277 278 2.681778 CTCTCCGCTCCACCCACT 60.682 66.667 0.00 0.00 0.00 4.00
278 279 3.775654 CCTCTCCGCTCCACCCAC 61.776 72.222 0.00 0.00 0.00 4.61
279 280 3.965026 CTCCTCTCCGCTCCACCCA 62.965 68.421 0.00 0.00 0.00 4.51
280 281 3.151022 CTCCTCTCCGCTCCACCC 61.151 72.222 0.00 0.00 0.00 4.61
281 282 3.151022 CCTCCTCTCCGCTCCACC 61.151 72.222 0.00 0.00 0.00 4.61
282 283 3.151022 CCCTCCTCTCCGCTCCAC 61.151 72.222 0.00 0.00 0.00 4.02
283 284 4.465446 CCCCTCCTCTCCGCTCCA 62.465 72.222 0.00 0.00 0.00 3.86
284 285 4.144727 TCCCCTCCTCTCCGCTCC 62.145 72.222 0.00 0.00 0.00 4.70
285 286 2.520741 CTCCCCTCCTCTCCGCTC 60.521 72.222 0.00 0.00 0.00 5.03
286 287 3.024356 TCTCCCCTCCTCTCCGCT 61.024 66.667 0.00 0.00 0.00 5.52
287 288 2.520741 CTCTCCCCTCCTCTCCGC 60.521 72.222 0.00 0.00 0.00 5.54
288 289 2.197324 CCTCTCCCCTCCTCTCCG 59.803 72.222 0.00 0.00 0.00 4.63
289 290 1.541672 CTCCTCTCCCCTCCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
290 291 1.541672 CCTCCTCTCCCCTCCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
291 292 2.710826 GCCTCCTCTCCCCTCCTCT 61.711 68.421 0.00 0.00 0.00 3.69
292 293 2.123033 GCCTCCTCTCCCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
293 294 4.150454 CGCCTCCTCTCCCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
298 299 3.471806 GAACCCGCCTCCTCTCCC 61.472 72.222 0.00 0.00 0.00 4.30
299 300 1.627297 AATGAACCCGCCTCCTCTCC 61.627 60.000 0.00 0.00 0.00 3.71
300 301 1.069358 CTAATGAACCCGCCTCCTCTC 59.931 57.143 0.00 0.00 0.00 3.20
301 302 1.123928 CTAATGAACCCGCCTCCTCT 58.876 55.000 0.00 0.00 0.00 3.69
302 303 0.831307 ACTAATGAACCCGCCTCCTC 59.169 55.000 0.00 0.00 0.00 3.71
303 304 0.541863 CACTAATGAACCCGCCTCCT 59.458 55.000 0.00 0.00 0.00 3.69
304 305 1.095807 GCACTAATGAACCCGCCTCC 61.096 60.000 0.00 0.00 0.00 4.30
305 306 0.392461 TGCACTAATGAACCCGCCTC 60.392 55.000 0.00 0.00 0.00 4.70
306 307 0.037590 TTGCACTAATGAACCCGCCT 59.962 50.000 0.00 0.00 0.00 5.52
307 308 0.885196 TTTGCACTAATGAACCCGCC 59.115 50.000 0.00 0.00 0.00 6.13
308 309 1.135402 CCTTTGCACTAATGAACCCGC 60.135 52.381 0.00 0.00 0.00 6.13
309 310 1.135402 GCCTTTGCACTAATGAACCCG 60.135 52.381 0.00 0.00 37.47 5.28
310 311 1.204704 GGCCTTTGCACTAATGAACCC 59.795 52.381 0.00 0.00 40.13 4.11
311 312 1.892474 TGGCCTTTGCACTAATGAACC 59.108 47.619 3.32 0.00 40.13 3.62
312 313 2.094545 CCTGGCCTTTGCACTAATGAAC 60.095 50.000 3.32 0.00 40.13 3.18
313 314 2.170166 CCTGGCCTTTGCACTAATGAA 58.830 47.619 3.32 0.00 40.13 2.57
314 315 1.616725 CCCTGGCCTTTGCACTAATGA 60.617 52.381 3.32 0.00 40.13 2.57
315 316 0.819582 CCCTGGCCTTTGCACTAATG 59.180 55.000 3.32 0.00 40.13 1.90
316 317 0.324645 CCCCTGGCCTTTGCACTAAT 60.325 55.000 3.32 0.00 40.13 1.73
317 318 1.076549 CCCCTGGCCTTTGCACTAA 59.923 57.895 3.32 0.00 40.13 2.24
318 319 2.763215 CCCCTGGCCTTTGCACTA 59.237 61.111 3.32 0.00 40.13 2.74
319 320 4.305956 CCCCCTGGCCTTTGCACT 62.306 66.667 3.32 0.00 40.13 4.40
333 334 4.252878 CAGCACATTTTTCAATTACCCCC 58.747 43.478 0.00 0.00 0.00 5.40
334 335 3.684305 GCAGCACATTTTTCAATTACCCC 59.316 43.478 0.00 0.00 0.00 4.95
335 336 3.367630 CGCAGCACATTTTTCAATTACCC 59.632 43.478 0.00 0.00 0.00 3.69
336 337 4.566659 CGCAGCACATTTTTCAATTACC 57.433 40.909 0.00 0.00 0.00 2.85
357 358 4.074526 TCAGCAGAGCCGGTCAGC 62.075 66.667 1.90 6.85 37.96 4.26
358 359 1.315981 TAGTCAGCAGAGCCGGTCAG 61.316 60.000 1.90 0.00 0.00 3.51
359 360 1.304134 TAGTCAGCAGAGCCGGTCA 60.304 57.895 1.90 0.00 0.00 4.02
360 361 1.435515 CTAGTCAGCAGAGCCGGTC 59.564 63.158 1.90 0.00 0.00 4.79
361 362 2.055042 CCTAGTCAGCAGAGCCGGT 61.055 63.158 1.90 0.00 0.00 5.28
362 363 2.811101 CCTAGTCAGCAGAGCCGG 59.189 66.667 0.00 0.00 0.00 6.13
363 364 2.105930 GCCTAGTCAGCAGAGCCG 59.894 66.667 0.00 0.00 0.00 5.52
364 365 1.441311 GAGCCTAGTCAGCAGAGCC 59.559 63.158 0.00 0.00 0.00 4.70
365 366 1.326213 TGGAGCCTAGTCAGCAGAGC 61.326 60.000 0.00 0.00 0.00 4.09
366 367 0.459489 GTGGAGCCTAGTCAGCAGAG 59.541 60.000 0.00 0.00 0.00 3.35
367 368 0.040351 AGTGGAGCCTAGTCAGCAGA 59.960 55.000 0.00 0.00 0.00 4.26
368 369 0.901124 AAGTGGAGCCTAGTCAGCAG 59.099 55.000 0.00 0.00 0.00 4.24
369 370 0.610174 CAAGTGGAGCCTAGTCAGCA 59.390 55.000 0.00 0.00 0.00 4.41
370 371 0.610687 ACAAGTGGAGCCTAGTCAGC 59.389 55.000 0.00 0.00 0.00 4.26
371 372 1.135257 CGACAAGTGGAGCCTAGTCAG 60.135 57.143 0.00 0.00 0.00 3.51
372 373 0.888619 CGACAAGTGGAGCCTAGTCA 59.111 55.000 0.00 0.00 0.00 3.41
373 374 0.889306 ACGACAAGTGGAGCCTAGTC 59.111 55.000 0.00 0.00 0.00 2.59
374 375 0.889306 GACGACAAGTGGAGCCTAGT 59.111 55.000 0.00 0.00 0.00 2.57
375 376 0.179161 CGACGACAAGTGGAGCCTAG 60.179 60.000 0.00 0.00 0.00 3.02
376 377 0.892358 ACGACGACAAGTGGAGCCTA 60.892 55.000 0.00 0.00 32.54 3.93
377 378 2.143594 GACGACGACAAGTGGAGCCT 62.144 60.000 0.00 0.00 32.54 4.58
378 379 1.733399 GACGACGACAAGTGGAGCC 60.733 63.158 0.00 0.00 32.54 4.70
379 380 1.004277 CAGACGACGACAAGTGGAGC 61.004 60.000 0.00 0.00 32.54 4.70
380 381 0.591659 TCAGACGACGACAAGTGGAG 59.408 55.000 0.00 0.00 32.54 3.86
381 382 1.244816 ATCAGACGACGACAAGTGGA 58.755 50.000 0.00 0.00 32.54 4.02
382 383 1.721389 CAATCAGACGACGACAAGTGG 59.279 52.381 0.00 0.00 34.52 4.00
383 384 1.721389 CCAATCAGACGACGACAAGTG 59.279 52.381 0.00 0.00 0.00 3.16
384 385 1.935300 GCCAATCAGACGACGACAAGT 60.935 52.381 0.00 0.00 0.00 3.16
385 386 0.716108 GCCAATCAGACGACGACAAG 59.284 55.000 0.00 0.00 0.00 3.16
386 387 0.317160 AGCCAATCAGACGACGACAA 59.683 50.000 0.00 0.00 0.00 3.18
387 388 1.132453 CTAGCCAATCAGACGACGACA 59.868 52.381 0.00 0.00 0.00 4.35
388 389 1.534175 CCTAGCCAATCAGACGACGAC 60.534 57.143 0.00 0.00 0.00 4.34
389 390 0.738975 CCTAGCCAATCAGACGACGA 59.261 55.000 0.00 0.00 0.00 4.20
390 391 0.738975 TCCTAGCCAATCAGACGACG 59.261 55.000 0.00 0.00 0.00 5.12
391 392 1.751924 AGTCCTAGCCAATCAGACGAC 59.248 52.381 0.00 0.00 32.70 4.34
392 393 2.145397 AGTCCTAGCCAATCAGACGA 57.855 50.000 0.00 0.00 32.70 4.20
393 394 4.386867 TTTAGTCCTAGCCAATCAGACG 57.613 45.455 0.00 0.00 32.70 4.18
394 395 6.458888 GCAAATTTAGTCCTAGCCAATCAGAC 60.459 42.308 0.00 0.00 0.00 3.51
395 396 5.590259 GCAAATTTAGTCCTAGCCAATCAGA 59.410 40.000 0.00 0.00 0.00 3.27
396 397 5.357878 TGCAAATTTAGTCCTAGCCAATCAG 59.642 40.000 0.00 0.00 0.00 2.90
397 398 5.125417 GTGCAAATTTAGTCCTAGCCAATCA 59.875 40.000 0.00 0.00 0.00 2.57
398 399 5.125417 TGTGCAAATTTAGTCCTAGCCAATC 59.875 40.000 0.00 0.00 0.00 2.67
399 400 5.016173 TGTGCAAATTTAGTCCTAGCCAAT 58.984 37.500 0.00 0.00 0.00 3.16
400 401 4.402829 TGTGCAAATTTAGTCCTAGCCAA 58.597 39.130 0.00 0.00 0.00 4.52
401 402 4.027674 TGTGCAAATTTAGTCCTAGCCA 57.972 40.909 0.00 0.00 0.00 4.75
402 403 5.125417 TCAATGTGCAAATTTAGTCCTAGCC 59.875 40.000 0.00 0.00 0.00 3.93
403 404 6.127897 ACTCAATGTGCAAATTTAGTCCTAGC 60.128 38.462 10.16 0.00 0.00 3.42
404 405 7.246311 CACTCAATGTGCAAATTTAGTCCTAG 58.754 38.462 12.62 0.21 40.06 3.02
405 406 7.144722 CACTCAATGTGCAAATTTAGTCCTA 57.855 36.000 12.62 0.00 40.06 2.94
406 407 6.017400 CACTCAATGTGCAAATTTAGTCCT 57.983 37.500 12.62 0.00 40.06 3.85
420 421 2.964464 TCCCACAAATTGCACTCAATGT 59.036 40.909 0.00 0.00 41.77 2.71
421 422 3.006110 AGTCCCACAAATTGCACTCAATG 59.994 43.478 0.00 0.00 41.77 2.82
422 423 3.233507 AGTCCCACAAATTGCACTCAAT 58.766 40.909 0.00 0.00 44.32 2.57
423 424 2.622942 GAGTCCCACAAATTGCACTCAA 59.377 45.455 8.97 0.00 36.51 3.02
424 425 2.229792 GAGTCCCACAAATTGCACTCA 58.770 47.619 8.97 0.00 32.22 3.41
425 426 2.229792 TGAGTCCCACAAATTGCACTC 58.770 47.619 0.00 0.92 0.00 3.51
426 427 2.363306 TGAGTCCCACAAATTGCACT 57.637 45.000 0.00 0.00 0.00 4.40
427 428 3.665745 ATTGAGTCCCACAAATTGCAC 57.334 42.857 0.00 0.00 0.00 4.57
428 429 4.406456 ACTATTGAGTCCCACAAATTGCA 58.594 39.130 0.00 0.00 0.00 4.08
429 430 5.163513 CAACTATTGAGTCCCACAAATTGC 58.836 41.667 0.00 0.00 33.58 3.56
430 431 5.713025 CCAACTATTGAGTCCCACAAATTG 58.287 41.667 0.00 0.00 33.58 2.32
431 432 4.220602 GCCAACTATTGAGTCCCACAAATT 59.779 41.667 0.00 0.00 33.58 1.82
432 433 3.763897 GCCAACTATTGAGTCCCACAAAT 59.236 43.478 0.00 0.00 33.58 2.32
433 434 3.153919 GCCAACTATTGAGTCCCACAAA 58.846 45.455 0.00 0.00 33.58 2.83
434 435 2.375174 AGCCAACTATTGAGTCCCACAA 59.625 45.455 0.00 0.00 33.58 3.33
435 436 1.985159 AGCCAACTATTGAGTCCCACA 59.015 47.619 0.00 0.00 33.58 4.17
436 437 2.789409 AGCCAACTATTGAGTCCCAC 57.211 50.000 0.00 0.00 33.58 4.61
437 438 3.806949 AAAGCCAACTATTGAGTCCCA 57.193 42.857 0.00 0.00 33.58 4.37
438 439 3.367395 GCAAAAGCCAACTATTGAGTCCC 60.367 47.826 0.00 0.00 33.58 4.46
439 440 3.255642 TGCAAAAGCCAACTATTGAGTCC 59.744 43.478 0.00 0.00 33.58 3.85
440 441 4.503741 TGCAAAAGCCAACTATTGAGTC 57.496 40.909 0.00 0.00 33.58 3.36
441 442 4.342092 ACTTGCAAAAGCCAACTATTGAGT 59.658 37.500 0.00 0.00 37.59 3.41
442 443 4.874970 ACTTGCAAAAGCCAACTATTGAG 58.125 39.130 0.00 0.00 0.00 3.02
443 444 4.935352 ACTTGCAAAAGCCAACTATTGA 57.065 36.364 0.00 0.00 0.00 2.57
444 445 5.989551 AAACTTGCAAAAGCCAACTATTG 57.010 34.783 0.00 0.00 0.00 1.90
445 446 6.112058 TCAAAACTTGCAAAAGCCAACTATT 58.888 32.000 0.00 0.00 0.00 1.73
446 447 5.669477 TCAAAACTTGCAAAAGCCAACTAT 58.331 33.333 0.00 0.00 0.00 2.12
447 448 5.078411 TCAAAACTTGCAAAAGCCAACTA 57.922 34.783 0.00 0.00 0.00 2.24
448 449 3.936564 TCAAAACTTGCAAAAGCCAACT 58.063 36.364 0.00 0.00 0.00 3.16
449 450 4.402583 GTTCAAAACTTGCAAAAGCCAAC 58.597 39.130 0.00 0.00 0.00 3.77
450 451 3.438434 GGTTCAAAACTTGCAAAAGCCAA 59.562 39.130 0.00 0.00 0.00 4.52
451 452 3.006247 GGTTCAAAACTTGCAAAAGCCA 58.994 40.909 0.00 0.00 0.00 4.75
452 453 3.006247 TGGTTCAAAACTTGCAAAAGCC 58.994 40.909 0.00 0.00 0.00 4.35
453 454 4.676849 TTGGTTCAAAACTTGCAAAAGC 57.323 36.364 0.00 0.86 0.00 3.51
454 455 5.958949 CGATTTGGTTCAAAACTTGCAAAAG 59.041 36.000 0.00 0.00 36.90 2.27
455 456 5.409826 ACGATTTGGTTCAAAACTTGCAAAA 59.590 32.000 0.00 0.00 36.90 2.44
456 457 4.932200 ACGATTTGGTTCAAAACTTGCAAA 59.068 33.333 0.00 0.00 36.90 3.68
457 458 4.499183 ACGATTTGGTTCAAAACTTGCAA 58.501 34.783 0.00 0.00 36.90 4.08
458 459 4.109050 GACGATTTGGTTCAAAACTTGCA 58.891 39.130 0.00 0.00 36.90 4.08
459 460 4.109050 TGACGATTTGGTTCAAAACTTGC 58.891 39.130 0.00 0.00 36.90 4.01
460 461 8.023128 AGATATGACGATTTGGTTCAAAACTTG 58.977 33.333 0.00 0.00 36.90 3.16
461 462 8.110860 AGATATGACGATTTGGTTCAAAACTT 57.889 30.769 0.00 0.00 36.90 2.66
462 463 7.687941 AGATATGACGATTTGGTTCAAAACT 57.312 32.000 0.00 0.00 36.90 2.66
463 464 8.879759 TCTAGATATGACGATTTGGTTCAAAAC 58.120 33.333 0.00 0.00 36.90 2.43
464 465 9.443323 TTCTAGATATGACGATTTGGTTCAAAA 57.557 29.630 0.00 0.00 36.90 2.44
465 466 8.879759 GTTCTAGATATGACGATTTGGTTCAAA 58.120 33.333 0.00 0.00 37.75 2.69
466 467 8.038351 TGTTCTAGATATGACGATTTGGTTCAA 58.962 33.333 0.00 0.00 0.00 2.69
467 468 7.552459 TGTTCTAGATATGACGATTTGGTTCA 58.448 34.615 0.00 0.00 0.00 3.18
468 469 8.420374 TTGTTCTAGATATGACGATTTGGTTC 57.580 34.615 0.00 0.00 0.00 3.62
469 470 8.041323 ACTTGTTCTAGATATGACGATTTGGTT 58.959 33.333 0.00 0.00 0.00 3.67
470 471 7.556844 ACTTGTTCTAGATATGACGATTTGGT 58.443 34.615 0.00 0.00 0.00 3.67
471 472 8.331022 CAACTTGTTCTAGATATGACGATTTGG 58.669 37.037 0.00 0.00 0.00 3.28
472 473 8.873830 ACAACTTGTTCTAGATATGACGATTTG 58.126 33.333 9.47 9.47 0.00 2.32
473 474 8.873830 CACAACTTGTTCTAGATATGACGATTT 58.126 33.333 0.00 0.00 0.00 2.17
474 475 7.492669 CCACAACTTGTTCTAGATATGACGATT 59.507 37.037 0.00 0.00 0.00 3.34
475 476 6.980978 CCACAACTTGTTCTAGATATGACGAT 59.019 38.462 0.00 0.00 0.00 3.73
476 477 6.330278 CCACAACTTGTTCTAGATATGACGA 58.670 40.000 0.00 0.00 0.00 4.20
477 478 5.520288 CCCACAACTTGTTCTAGATATGACG 59.480 44.000 0.00 0.00 0.00 4.35
478 479 6.535508 GTCCCACAACTTGTTCTAGATATGAC 59.464 42.308 0.00 0.00 0.00 3.06
479 480 6.440647 AGTCCCACAACTTGTTCTAGATATGA 59.559 38.462 0.00 0.00 0.00 2.15
480 481 6.644347 AGTCCCACAACTTGTTCTAGATATG 58.356 40.000 0.00 0.00 0.00 1.78
481 482 6.127026 GGAGTCCCACAACTTGTTCTAGATAT 60.127 42.308 0.00 0.00 0.00 1.63
482 483 5.187186 GGAGTCCCACAACTTGTTCTAGATA 59.813 44.000 0.00 0.00 0.00 1.98
483 484 4.020128 GGAGTCCCACAACTTGTTCTAGAT 60.020 45.833 0.00 0.00 0.00 1.98
484 485 3.323979 GGAGTCCCACAACTTGTTCTAGA 59.676 47.826 0.00 0.00 0.00 2.43
485 486 3.325135 AGGAGTCCCACAACTTGTTCTAG 59.675 47.826 5.25 0.00 33.88 2.43
486 487 3.071023 CAGGAGTCCCACAACTTGTTCTA 59.929 47.826 5.25 0.00 33.88 2.10
487 488 2.127708 AGGAGTCCCACAACTTGTTCT 58.872 47.619 5.25 0.00 33.88 3.01
488 489 2.222027 CAGGAGTCCCACAACTTGTTC 58.778 52.381 5.25 0.00 33.88 3.18
489 490 1.133792 CCAGGAGTCCCACAACTTGTT 60.134 52.381 5.25 0.00 33.88 2.83
490 491 0.474184 CCAGGAGTCCCACAACTTGT 59.526 55.000 5.25 0.00 33.88 3.16
491 492 0.474184 ACCAGGAGTCCCACAACTTG 59.526 55.000 5.25 0.00 33.88 3.16
492 493 0.474184 CACCAGGAGTCCCACAACTT 59.526 55.000 5.25 0.00 33.88 2.66
493 494 2.056906 GCACCAGGAGTCCCACAACT 62.057 60.000 5.25 0.00 33.88 3.16
494 495 1.600916 GCACCAGGAGTCCCACAAC 60.601 63.158 5.25 0.00 33.88 3.32
495 496 0.472925 TAGCACCAGGAGTCCCACAA 60.473 55.000 5.25 0.00 33.88 3.33
496 497 0.252696 ATAGCACCAGGAGTCCCACA 60.253 55.000 5.25 0.00 33.88 4.17
497 498 0.912486 AATAGCACCAGGAGTCCCAC 59.088 55.000 5.25 0.00 33.88 4.61
498 499 2.116238 GTAATAGCACCAGGAGTCCCA 58.884 52.381 5.25 0.00 33.88 4.37
499 500 1.416772 GGTAATAGCACCAGGAGTCCC 59.583 57.143 5.25 0.00 38.55 4.46
500 501 2.365941 GAGGTAATAGCACCAGGAGTCC 59.634 54.545 0.00 0.00 41.40 3.85
501 502 2.365941 GGAGGTAATAGCACCAGGAGTC 59.634 54.545 0.00 0.00 41.40 3.36
502 503 2.022918 AGGAGGTAATAGCACCAGGAGT 60.023 50.000 8.53 0.00 41.40 3.85
503 504 2.683768 AGGAGGTAATAGCACCAGGAG 58.316 52.381 8.53 0.00 41.40 3.69
504 505 2.868964 AGGAGGTAATAGCACCAGGA 57.131 50.000 8.53 0.00 41.40 3.86
505 506 5.513267 GGAAATAGGAGGTAATAGCACCAGG 60.513 48.000 8.53 0.00 41.40 4.45
506 507 5.552178 GGAAATAGGAGGTAATAGCACCAG 58.448 45.833 8.53 0.00 41.40 4.00
507 508 4.039973 CGGAAATAGGAGGTAATAGCACCA 59.960 45.833 8.53 0.00 41.40 4.17
508 509 4.562963 CCGGAAATAGGAGGTAATAGCACC 60.563 50.000 0.00 0.00 39.02 5.01
509 510 4.566987 CCGGAAATAGGAGGTAATAGCAC 58.433 47.826 0.00 0.00 0.00 4.40
510 511 3.007614 GCCGGAAATAGGAGGTAATAGCA 59.992 47.826 5.05 0.00 0.00 3.49
511 512 3.261137 AGCCGGAAATAGGAGGTAATAGC 59.739 47.826 5.05 0.00 0.00 2.97
512 513 5.715753 AGTAGCCGGAAATAGGAGGTAATAG 59.284 44.000 5.05 0.00 0.00 1.73
513 514 5.648247 AGTAGCCGGAAATAGGAGGTAATA 58.352 41.667 5.05 0.00 0.00 0.98
514 515 4.490706 AGTAGCCGGAAATAGGAGGTAAT 58.509 43.478 5.05 0.00 0.00 1.89
515 516 3.919834 AGTAGCCGGAAATAGGAGGTAA 58.080 45.455 5.05 0.00 0.00 2.85
516 517 3.607490 AGTAGCCGGAAATAGGAGGTA 57.393 47.619 5.05 0.00 0.00 3.08
517 518 2.473576 AGTAGCCGGAAATAGGAGGT 57.526 50.000 5.05 0.00 0.00 3.85
518 519 3.498334 AGTAGTAGCCGGAAATAGGAGG 58.502 50.000 5.05 0.00 0.00 4.30
519 520 4.701171 CCTAGTAGTAGCCGGAAATAGGAG 59.299 50.000 5.05 0.00 32.03 3.69
520 521 4.660168 CCTAGTAGTAGCCGGAAATAGGA 58.340 47.826 5.05 0.00 32.03 2.94
521 522 3.193056 GCCTAGTAGTAGCCGGAAATAGG 59.807 52.174 5.05 7.92 33.24 2.57
522 523 3.825014 TGCCTAGTAGTAGCCGGAAATAG 59.175 47.826 5.05 0.00 0.00 1.73
523 524 3.571401 GTGCCTAGTAGTAGCCGGAAATA 59.429 47.826 5.05 0.00 0.00 1.40
524 525 2.364647 GTGCCTAGTAGTAGCCGGAAAT 59.635 50.000 5.05 0.00 0.00 2.17
525 526 1.753073 GTGCCTAGTAGTAGCCGGAAA 59.247 52.381 5.05 0.00 0.00 3.13
526 527 1.064166 AGTGCCTAGTAGTAGCCGGAA 60.064 52.381 5.05 0.00 0.00 4.30
527 528 0.549950 AGTGCCTAGTAGTAGCCGGA 59.450 55.000 5.05 0.00 0.00 5.14
528 529 2.152830 CTAGTGCCTAGTAGTAGCCGG 58.847 57.143 0.00 0.00 30.16 6.13
529 530 1.536331 GCTAGTGCCTAGTAGTAGCCG 59.464 57.143 15.29 0.00 39.89 5.52
530 531 2.866351 AGCTAGTGCCTAGTAGTAGCC 58.134 52.381 19.59 8.66 44.37 3.93
531 532 3.437741 GCTAGCTAGTGCCTAGTAGTAGC 59.562 52.174 21.62 17.21 43.89 3.58
532 533 4.901868 AGCTAGCTAGTGCCTAGTAGTAG 58.098 47.826 17.69 0.00 40.80 2.57
533 534 4.978438 AGCTAGCTAGTGCCTAGTAGTA 57.022 45.455 17.69 1.85 40.80 1.82
534 535 3.868619 AGCTAGCTAGTGCCTAGTAGT 57.131 47.619 17.69 0.00 40.80 2.73
535 536 3.687698 GCTAGCTAGCTAGTGCCTAGTAG 59.312 52.174 39.05 21.90 45.67 2.57
536 537 3.677190 GCTAGCTAGCTAGTGCCTAGTA 58.323 50.000 39.05 13.72 45.67 1.82
537 538 2.510613 GCTAGCTAGCTAGTGCCTAGT 58.489 52.381 39.05 11.60 45.67 2.57
627 636 1.616374 GGACCTGCCTAGCTAGCTTAG 59.384 57.143 24.88 15.62 0.00 2.18
628 637 1.063190 TGGACCTGCCTAGCTAGCTTA 60.063 52.381 24.88 8.09 37.63 3.09
668 677 2.034879 GCAGTTTGCCGCTAGCTGA 61.035 57.895 19.70 0.00 44.23 4.26
693 705 2.511373 CAGCGCCGCAGTGGAATA 60.511 61.111 13.36 0.00 42.00 1.75
777 791 0.541863 ATGTAAGGTCGGAGGCAAGG 59.458 55.000 0.00 0.00 0.00 3.61
819 862 2.045926 ATGCTTGTGAGGTCGGGC 60.046 61.111 0.00 0.00 0.00 6.13
878 928 1.438651 TTGTGCGCTATGTGAGGAAC 58.561 50.000 9.73 0.00 0.00 3.62
938 998 0.248907 CGGAGAATTCTTCGCGCCTA 60.249 55.000 22.62 0.00 38.24 3.93
960 1020 2.602456 CCTGCTATGCTACGTACGTGAG 60.602 54.545 30.25 21.79 0.00 3.51
1035 1095 2.734673 GAACGGCAGCTGCGAGAAG 61.735 63.158 31.19 20.73 43.26 2.85
2000 2136 8.980596 AGCCATTTTGATTCCATAATAACTTGA 58.019 29.630 0.00 0.00 0.00 3.02
2072 2218 6.258947 GGAGTTGATAAGCTCAATAAGTCCAC 59.741 42.308 16.56 0.62 45.36 4.02
2093 2239 7.223584 CAAAATTTTAATCTTTGTGGGGGAGT 58.776 34.615 2.44 0.00 0.00 3.85
2145 2307 9.515020 CGCATGGTAAATTAAAGTGACATAATT 57.485 29.630 0.00 1.95 34.14 1.40
2146 2308 8.898761 TCGCATGGTAAATTAAAGTGACATAAT 58.101 29.630 0.00 0.00 0.00 1.28
2147 2309 8.270080 TCGCATGGTAAATTAAAGTGACATAA 57.730 30.769 0.00 0.00 0.00 1.90
2148 2310 7.011950 CCTCGCATGGTAAATTAAAGTGACATA 59.988 37.037 0.00 0.00 0.00 2.29
2149 2311 6.183360 CCTCGCATGGTAAATTAAAGTGACAT 60.183 38.462 0.00 0.00 0.00 3.06
2150 2312 5.123186 CCTCGCATGGTAAATTAAAGTGACA 59.877 40.000 0.00 0.00 0.00 3.58
2151 2313 5.123344 ACCTCGCATGGTAAATTAAAGTGAC 59.877 40.000 0.00 0.00 38.79 3.67
2171 2340 6.015772 TCCAGTTGCCAAATTTTTACTACCTC 60.016 38.462 0.00 0.00 0.00 3.85
2265 2435 3.093814 ACATCATGTATACGGGCCGATA 58.906 45.455 35.78 21.68 0.00 2.92
2268 2438 2.029739 TGTACATCATGTATACGGGCCG 60.030 50.000 27.06 27.06 35.05 6.13
2448 2618 2.205307 ATCTGGCGCGACTAAGTTAC 57.795 50.000 15.80 0.00 0.00 2.50
2462 2632 2.743752 CGCTCACGTGCCAATCTGG 61.744 63.158 11.67 0.00 35.92 3.86
2492 2662 9.869844 CTCACGTCAATTATTATTTCTTGATCC 57.130 33.333 0.00 0.00 30.97 3.36
2556 2729 4.108336 CACGAGTACATGGATGAGAACAG 58.892 47.826 0.00 0.00 0.00 3.16
2598 2771 5.300752 ACTGTGAGACGTCAATGAAGAAAT 58.699 37.500 19.50 0.00 33.27 2.17
2603 2776 5.116180 AGAAAACTGTGAGACGTCAATGAA 58.884 37.500 19.50 0.00 33.27 2.57
2605 2778 5.409643 AAGAAAACTGTGAGACGTCAATG 57.590 39.130 19.50 5.49 33.27 2.82
2670 2846 3.304726 GCCTAATATCAAAAGCCGGAAGC 60.305 47.826 5.05 0.00 44.25 3.86
2671 2847 4.137543 AGCCTAATATCAAAAGCCGGAAG 58.862 43.478 5.05 0.00 0.00 3.46
2672 2848 4.164843 AGCCTAATATCAAAAGCCGGAA 57.835 40.909 5.05 0.00 0.00 4.30
2673 2849 3.857157 AGCCTAATATCAAAAGCCGGA 57.143 42.857 5.05 0.00 0.00 5.14
2674 2850 4.455877 CCTAAGCCTAATATCAAAAGCCGG 59.544 45.833 0.00 0.00 0.00 6.13
2675 2851 5.049405 CACCTAAGCCTAATATCAAAAGCCG 60.049 44.000 0.00 0.00 0.00 5.52
2676 2852 6.062095 TCACCTAAGCCTAATATCAAAAGCC 58.938 40.000 0.00 0.00 0.00 4.35
2677 2853 6.768381 ACTCACCTAAGCCTAATATCAAAAGC 59.232 38.462 0.00 0.00 0.00 3.51
2678 2854 7.227512 CCACTCACCTAAGCCTAATATCAAAAG 59.772 40.741 0.00 0.00 0.00 2.27
2679 2855 7.054124 CCACTCACCTAAGCCTAATATCAAAA 58.946 38.462 0.00 0.00 0.00 2.44
2680 2856 6.157994 ACCACTCACCTAAGCCTAATATCAAA 59.842 38.462 0.00 0.00 0.00 2.69
2681 2857 5.665812 ACCACTCACCTAAGCCTAATATCAA 59.334 40.000 0.00 0.00 0.00 2.57
2682 2858 5.216622 ACCACTCACCTAAGCCTAATATCA 58.783 41.667 0.00 0.00 0.00 2.15
2683 2859 5.810080 ACCACTCACCTAAGCCTAATATC 57.190 43.478 0.00 0.00 0.00 1.63
2684 2860 6.357367 CAAACCACTCACCTAAGCCTAATAT 58.643 40.000 0.00 0.00 0.00 1.28
2685 2861 5.338871 CCAAACCACTCACCTAAGCCTAATA 60.339 44.000 0.00 0.00 0.00 0.98
2686 2862 4.567747 CCAAACCACTCACCTAAGCCTAAT 60.568 45.833 0.00 0.00 0.00 1.73
2687 2863 3.244770 CCAAACCACTCACCTAAGCCTAA 60.245 47.826 0.00 0.00 0.00 2.69
2688 2864 2.304761 CCAAACCACTCACCTAAGCCTA 59.695 50.000 0.00 0.00 0.00 3.93
2689 2865 1.073923 CCAAACCACTCACCTAAGCCT 59.926 52.381 0.00 0.00 0.00 4.58
2690 2866 1.534729 CCAAACCACTCACCTAAGCC 58.465 55.000 0.00 0.00 0.00 4.35
2691 2867 1.202891 ACCCAAACCACTCACCTAAGC 60.203 52.381 0.00 0.00 0.00 3.09
2692 2868 2.951229 ACCCAAACCACTCACCTAAG 57.049 50.000 0.00 0.00 0.00 2.18
2693 2869 3.071892 CACTACCCAAACCACTCACCTAA 59.928 47.826 0.00 0.00 0.00 2.69
2694 2870 2.635915 CACTACCCAAACCACTCACCTA 59.364 50.000 0.00 0.00 0.00 3.08
2695 2871 1.420138 CACTACCCAAACCACTCACCT 59.580 52.381 0.00 0.00 0.00 4.00
2696 2872 1.544759 CCACTACCCAAACCACTCACC 60.545 57.143 0.00 0.00 0.00 4.02
2697 2873 1.892209 CCACTACCCAAACCACTCAC 58.108 55.000 0.00 0.00 0.00 3.51
2698 2874 0.109723 GCCACTACCCAAACCACTCA 59.890 55.000 0.00 0.00 0.00 3.41
2699 2875 0.608308 GGCCACTACCCAAACCACTC 60.608 60.000 0.00 0.00 0.00 3.51
2700 2876 1.065997 AGGCCACTACCCAAACCACT 61.066 55.000 5.01 0.00 0.00 4.00
2701 2877 0.694196 TAGGCCACTACCCAAACCAC 59.306 55.000 5.01 0.00 0.00 4.16
2702 2878 0.988832 CTAGGCCACTACCCAAACCA 59.011 55.000 5.01 0.00 0.00 3.67
2703 2879 0.393944 GCTAGGCCACTACCCAAACC 60.394 60.000 5.01 0.00 0.00 3.27
2704 2880 0.618981 AGCTAGGCCACTACCCAAAC 59.381 55.000 5.01 0.00 0.00 2.93
2705 2881 2.116238 CTAGCTAGGCCACTACCCAAA 58.884 52.381 13.32 0.00 0.00 3.28
2706 2882 1.789523 CTAGCTAGGCCACTACCCAA 58.210 55.000 13.32 0.00 0.00 4.12
2707 2883 0.759436 GCTAGCTAGGCCACTACCCA 60.759 60.000 22.10 0.00 0.00 4.51
2708 2884 0.759436 TGCTAGCTAGGCCACTACCC 60.759 60.000 22.10 2.81 0.00 3.69
2709 2885 0.389757 GTGCTAGCTAGGCCACTACC 59.610 60.000 22.10 3.52 0.00 3.18
2710 2886 0.389757 GGTGCTAGCTAGGCCACTAC 59.610 60.000 22.10 7.29 0.00 2.73
2711 2887 0.759436 GGGTGCTAGCTAGGCCACTA 60.759 60.000 22.10 2.41 0.00 2.74
2712 2888 2.066999 GGGTGCTAGCTAGGCCACT 61.067 63.158 22.10 1.03 0.00 4.00
2713 2889 2.506472 GGGTGCTAGCTAGGCCAC 59.494 66.667 22.10 19.88 0.00 5.01
2714 2890 2.768344 GGGGTGCTAGCTAGGCCA 60.768 66.667 22.10 9.75 0.00 5.36
2715 2891 2.046009 GAAGGGGTGCTAGCTAGGCC 62.046 65.000 22.10 12.23 0.00 5.19
2716 2892 1.338136 TGAAGGGGTGCTAGCTAGGC 61.338 60.000 22.10 14.31 0.00 3.93
2717 2893 1.346068 GATGAAGGGGTGCTAGCTAGG 59.654 57.143 22.10 4.48 0.00 3.02
2718 2894 2.042464 TGATGAAGGGGTGCTAGCTAG 58.958 52.381 16.84 16.84 0.00 3.42
2719 2895 2.174685 TGATGAAGGGGTGCTAGCTA 57.825 50.000 17.23 0.00 0.00 3.32
2720 2896 1.516110 ATGATGAAGGGGTGCTAGCT 58.484 50.000 17.23 0.00 0.00 3.32
2721 2897 3.341823 CATATGATGAAGGGGTGCTAGC 58.658 50.000 8.10 8.10 0.00 3.42
2722 2898 3.584406 TCCATATGATGAAGGGGTGCTAG 59.416 47.826 3.65 0.00 0.00 3.42
2723 2899 3.597182 TCCATATGATGAAGGGGTGCTA 58.403 45.455 3.65 0.00 0.00 3.49
2724 2900 2.421725 TCCATATGATGAAGGGGTGCT 58.578 47.619 3.65 0.00 0.00 4.40
2725 2901 2.957402 TCCATATGATGAAGGGGTGC 57.043 50.000 3.65 0.00 0.00 5.01
2726 2902 4.784838 TCCTATCCATATGATGAAGGGGTG 59.215 45.833 3.65 0.00 34.76 4.61
2727 2903 5.035556 CTCCTATCCATATGATGAAGGGGT 58.964 45.833 3.65 0.00 34.76 4.95
2728 2904 4.141528 GCTCCTATCCATATGATGAAGGGG 60.142 50.000 3.65 6.58 34.76 4.79
2729 2905 4.472470 TGCTCCTATCCATATGATGAAGGG 59.528 45.833 3.65 1.54 34.76 3.95
2730 2906 5.688814 TGCTCCTATCCATATGATGAAGG 57.311 43.478 3.65 5.74 34.76 3.46
2731 2907 6.542735 CCATTGCTCCTATCCATATGATGAAG 59.457 42.308 3.65 0.00 34.76 3.02
2732 2908 6.420638 CCATTGCTCCTATCCATATGATGAA 58.579 40.000 3.65 0.00 34.76 2.57
2733 2909 5.630774 GCCATTGCTCCTATCCATATGATGA 60.631 44.000 3.65 0.00 32.71 2.92
2734 2910 4.579340 GCCATTGCTCCTATCCATATGATG 59.421 45.833 3.65 0.00 32.71 3.07
2735 2911 4.228895 TGCCATTGCTCCTATCCATATGAT 59.771 41.667 3.65 0.00 38.71 2.45
2736 2912 3.588396 TGCCATTGCTCCTATCCATATGA 59.412 43.478 3.65 0.00 38.71 2.15
2737 2913 3.959293 TGCCATTGCTCCTATCCATATG 58.041 45.455 0.00 0.00 38.71 1.78
2738 2914 4.875578 ATGCCATTGCTCCTATCCATAT 57.124 40.909 0.00 0.00 38.71 1.78
2739 2915 5.192321 ACATATGCCATTGCTCCTATCCATA 59.808 40.000 1.58 0.00 38.71 2.74
2740 2916 4.017775 ACATATGCCATTGCTCCTATCCAT 60.018 41.667 1.58 0.00 38.71 3.41
2741 2917 3.331591 ACATATGCCATTGCTCCTATCCA 59.668 43.478 1.58 0.00 38.71 3.41
2742 2918 3.960571 ACATATGCCATTGCTCCTATCC 58.039 45.455 1.58 0.00 38.71 2.59
2743 2919 5.306532 CAACATATGCCATTGCTCCTATC 57.693 43.478 1.58 0.00 38.71 2.08
2762 2938 2.165030 CTGAATCCACCATCTTGGCAAC 59.835 50.000 0.00 0.00 42.67 4.17
2763 2939 2.449464 CTGAATCCACCATCTTGGCAA 58.551 47.619 0.00 0.00 42.67 4.52
2764 2940 1.341285 CCTGAATCCACCATCTTGGCA 60.341 52.381 0.00 0.00 42.67 4.92
2765 2941 1.341383 ACCTGAATCCACCATCTTGGC 60.341 52.381 0.00 0.00 42.67 4.52
2766 2942 2.814805 ACCTGAATCCACCATCTTGG 57.185 50.000 0.00 0.00 45.02 3.61
2767 2943 7.000472 ACAATATACCTGAATCCACCATCTTG 59.000 38.462 0.00 0.00 0.00 3.02
2768 2944 7.154191 ACAATATACCTGAATCCACCATCTT 57.846 36.000 0.00 0.00 0.00 2.40
2769 2945 6.770286 ACAATATACCTGAATCCACCATCT 57.230 37.500 0.00 0.00 0.00 2.90
2770 2946 7.285401 ACAAACAATATACCTGAATCCACCATC 59.715 37.037 0.00 0.00 0.00 3.51
2771 2947 7.125391 ACAAACAATATACCTGAATCCACCAT 58.875 34.615 0.00 0.00 0.00 3.55
2772 2948 6.489603 ACAAACAATATACCTGAATCCACCA 58.510 36.000 0.00 0.00 0.00 4.17
2773 2949 8.514330 TTACAAACAATATACCTGAATCCACC 57.486 34.615 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.