Multiple sequence alignment - TraesCS6A01G334700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G334700 chr6A 100.000 3339 0 0 1 3339 565342491 565345829 0.000000e+00 6167.0
1 TraesCS6A01G334700 chr6D 92.941 1020 55 15 1549 2565 422605769 422606774 0.000000e+00 1469.0
2 TraesCS6A01G334700 chr6D 92.209 783 36 7 586 1346 422604669 422605448 0.000000e+00 1085.0
3 TraesCS6A01G334700 chr6D 86.914 619 60 18 2644 3249 422606777 422607387 0.000000e+00 675.0
4 TraesCS6A01G334700 chr6D 93.299 194 12 1 1 193 422217515 422217708 5.450000e-73 285.0
5 TraesCS6A01G334700 chr6D 90.374 187 17 1 8 193 421681948 421682134 9.250000e-61 244.0
6 TraesCS6A01G334700 chr6D 90.164 183 16 2 13 193 421463960 421463778 1.550000e-58 237.0
7 TraesCS6A01G334700 chr6D 89.362 188 19 1 7 193 421663973 421664160 5.570000e-58 235.0
8 TraesCS6A01G334700 chr6D 88.770 187 20 1 8 193 421696412 421696598 9.320000e-56 228.0
9 TraesCS6A01G334700 chr6D 98.230 113 2 0 3227 3339 324567428 324567540 7.310000e-47 198.0
10 TraesCS6A01G334700 chr6B 93.114 639 34 5 1929 2565 636796604 636797234 0.000000e+00 928.0
11 TraesCS6A01G334700 chr6B 93.390 469 24 4 897 1358 636795473 636795941 0.000000e+00 688.0
12 TraesCS6A01G334700 chr6B 87.159 623 45 18 2644 3247 636797237 636797843 0.000000e+00 675.0
13 TraesCS6A01G334700 chr6B 91.389 360 26 3 1549 1906 636796252 636796608 3.870000e-134 488.0
14 TraesCS6A01G334700 chr6B 90.840 262 17 6 192 449 636788198 636788456 8.870000e-91 344.0
15 TraesCS6A01G334700 chr6B 93.229 192 13 0 2 193 634502252 634502061 1.960000e-72 283.0
16 TraesCS6A01G334700 chr6B 87.200 250 27 5 204 449 487136318 487136070 2.540000e-71 279.0
17 TraesCS6A01G334700 chr6B 92.746 193 14 0 1 193 636767065 636767257 2.540000e-71 279.0
18 TraesCS6A01G334700 chr6B 93.590 78 5 0 2565 2642 55676141 55676064 2.100000e-22 117.0
19 TraesCS6A01G334700 chr5B 87.072 263 24 9 193 449 276668896 276668638 4.210000e-74 289.0
20 TraesCS6A01G334700 chr3A 87.649 251 24 6 204 449 114571003 114570755 5.450000e-73 285.0
21 TraesCS6A01G334700 chr3A 87.251 251 25 6 204 449 14291137 14291385 2.540000e-71 279.0
22 TraesCS6A01G334700 chr5D 86.260 262 26 8 194 449 201311992 201312249 3.280000e-70 276.0
23 TraesCS6A01G334700 chr5D 98.230 113 2 0 3227 3339 172357343 172357231 7.310000e-47 198.0
24 TraesCS6A01G334700 chr5D 98.230 113 2 0 3227 3339 377225455 377225567 7.310000e-47 198.0
25 TraesCS6A01G334700 chr5D 93.750 80 4 1 2564 2642 333559556 333559477 5.850000e-23 119.0
26 TraesCS6A01G334700 chr7A 86.800 250 27 6 204 449 649424828 649425075 1.180000e-69 274.0
27 TraesCS6A01G334700 chr7A 98.246 114 1 1 3226 3339 294969087 294969199 7.310000e-47 198.0
28 TraesCS6A01G334700 chr7A 90.588 85 4 3 2559 2642 350571786 350571867 3.520000e-20 110.0
29 TraesCS6A01G334700 chr7A 100.000 33 0 0 441 473 661645608 661645576 1.000000e-05 62.1
30 TraesCS6A01G334700 chr5A 86.800 250 28 5 204 449 270372909 270373157 1.180000e-69 274.0
31 TraesCS6A01G334700 chr5A 99.115 113 1 0 3227 3339 316776565 316776677 1.570000e-48 204.0
32 TraesCS6A01G334700 chr5A 89.011 91 6 3 2556 2644 321667573 321667485 3.520000e-20 110.0
33 TraesCS6A01G334700 chr5A 95.000 40 2 0 437 476 528976242 528976203 2.780000e-06 63.9
34 TraesCS6A01G334700 chr4A 86.905 252 24 8 204 449 166729990 166730238 1.180000e-69 274.0
35 TraesCS6A01G334700 chr4A 87.565 193 21 2 2 194 11816623 11816812 1.560000e-53 220.0
36 TraesCS6A01G334700 chr4A 93.750 80 3 1 2565 2644 598725733 598725656 5.850000e-23 119.0
37 TraesCS6A01G334700 chr3D 98.230 113 2 0 3227 3339 611012946 611013058 7.310000e-47 198.0
38 TraesCS6A01G334700 chr1A 98.230 113 2 0 3227 3339 125944050 125943938 7.310000e-47 198.0
39 TraesCS6A01G334700 chr1A 98.230 113 2 0 3227 3339 563730150 563730038 7.310000e-47 198.0
40 TraesCS6A01G334700 chr1A 91.765 85 4 2 2559 2642 152464186 152464104 7.570000e-22 115.0
41 TraesCS6A01G334700 chr1A 91.111 90 1 6 2553 2641 225509579 225509496 7.570000e-22 115.0
42 TraesCS6A01G334700 chr4D 85.263 190 25 2 5 194 455740750 455740564 3.400000e-45 193.0
43 TraesCS6A01G334700 chr4D 94.737 38 2 0 437 474 473142601 473142638 3.600000e-05 60.2
44 TraesCS6A01G334700 chr1D 93.798 129 5 3 3214 3339 291669591 291669719 1.220000e-44 191.0
45 TraesCS6A01G334700 chr1D 89.655 87 7 1 2559 2645 28960919 28961003 3.520000e-20 110.0
46 TraesCS6A01G334700 chr2D 92.941 85 2 3 2557 2641 451974323 451974403 1.630000e-23 121.0
47 TraesCS6A01G334700 chrUn 97.297 37 0 1 441 477 112216219 112216184 1.000000e-05 62.1
48 TraesCS6A01G334700 chrUn 96.970 33 1 0 441 473 23728651 23728683 4.650000e-04 56.5
49 TraesCS6A01G334700 chr7D 100.000 33 0 0 441 473 572616377 572616345 1.000000e-05 62.1
50 TraesCS6A01G334700 chr7D 97.222 36 0 1 441 475 227692734 227692699 3.600000e-05 60.2
51 TraesCS6A01G334700 chr7D 94.595 37 2 0 441 477 538286924 538286960 1.290000e-04 58.4
52 TraesCS6A01G334700 chr7B 100.000 33 0 0 441 473 10960896 10960864 1.000000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G334700 chr6A 565342491 565345829 3338 False 6167.000000 6167 100.000 1 3339 1 chr6A.!!$F1 3338
1 TraesCS6A01G334700 chr6D 422604669 422607387 2718 False 1076.333333 1469 90.688 586 3249 3 chr6D.!!$F6 2663
2 TraesCS6A01G334700 chr6B 636795473 636797843 2370 False 694.750000 928 91.263 897 3247 4 chr6B.!!$F3 2350

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 195 0.034337 GCACTCGTCCACCACCTTTA 59.966 55.000 0.00 0.0 0.00 1.85 F
572 573 0.247460 TCACTGCATGACTCCCTTCG 59.753 55.000 0.00 0.0 29.99 3.79 F
574 575 1.134580 CACTGCATGACTCCCTTCGAT 60.135 52.381 0.00 0.0 0.00 3.59 F
1084 1106 1.258445 GGAGGCCTTCGGAGACTCAA 61.258 60.000 6.77 0.0 34.32 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1027 1049 0.607217 TGAACCTCCTCGTCGTAGCA 60.607 55.0 0.0 0.0 0.0 3.49 R
1755 1927 0.759346 AAAGCGGTTCTCTCCACAGT 59.241 50.0 0.0 0.0 0.0 3.55 R
2197 2371 1.368641 GTGCATCGCCTGACATTACA 58.631 50.0 0.0 0.0 0.0 2.41 R
2972 3155 0.034477 CCCAAGCAACCGAATACCCT 60.034 55.0 0.0 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.929722 GCACGAATATTCATATTGTCAAACTAA 57.070 29.630 15.57 0.00 33.37 2.24
35 36 9.725019 TTCATATTGTCAAACTAACTGATCACT 57.275 29.630 0.00 0.00 0.00 3.41
36 37 9.371136 TCATATTGTCAAACTAACTGATCACTC 57.629 33.333 0.00 0.00 0.00 3.51
37 38 6.712241 ATTGTCAAACTAACTGATCACTCG 57.288 37.500 0.00 0.00 0.00 4.18
38 39 5.196341 TGTCAAACTAACTGATCACTCGT 57.804 39.130 0.00 0.00 0.00 4.18
39 40 5.220381 TGTCAAACTAACTGATCACTCGTC 58.780 41.667 0.00 0.00 0.00 4.20
40 41 5.220381 GTCAAACTAACTGATCACTCGTCA 58.780 41.667 0.00 0.00 0.00 4.35
41 42 5.343593 GTCAAACTAACTGATCACTCGTCAG 59.656 44.000 0.00 1.85 46.60 3.51
42 43 5.240844 TCAAACTAACTGATCACTCGTCAGA 59.759 40.000 9.86 0.00 44.57 3.27
43 44 4.688511 ACTAACTGATCACTCGTCAGAC 57.311 45.455 9.86 0.00 44.57 3.51
44 45 3.440872 ACTAACTGATCACTCGTCAGACC 59.559 47.826 9.86 0.00 44.57 3.85
45 46 1.911057 ACTGATCACTCGTCAGACCA 58.089 50.000 9.86 0.00 44.57 4.02
46 47 1.815613 ACTGATCACTCGTCAGACCAG 59.184 52.381 9.86 0.00 44.57 4.00
47 48 1.133982 CTGATCACTCGTCAGACCAGG 59.866 57.143 0.00 0.00 44.57 4.45
48 49 1.178276 GATCACTCGTCAGACCAGGT 58.822 55.000 0.00 0.00 0.00 4.00
49 50 2.290705 TGATCACTCGTCAGACCAGGTA 60.291 50.000 0.00 0.00 0.00 3.08
50 51 2.281539 TCACTCGTCAGACCAGGTAA 57.718 50.000 0.00 0.00 0.00 2.85
51 52 1.884579 TCACTCGTCAGACCAGGTAAC 59.115 52.381 0.00 0.00 0.00 2.50
52 53 1.611977 CACTCGTCAGACCAGGTAACA 59.388 52.381 0.00 0.00 41.41 2.41
53 54 2.231478 CACTCGTCAGACCAGGTAACAT 59.769 50.000 0.00 0.00 41.41 2.71
54 55 2.492484 ACTCGTCAGACCAGGTAACATC 59.508 50.000 0.00 0.00 41.41 3.06
55 56 1.822990 TCGTCAGACCAGGTAACATCC 59.177 52.381 0.00 0.00 41.41 3.51
56 57 1.825474 CGTCAGACCAGGTAACATCCT 59.175 52.381 0.00 0.00 38.51 3.24
64 65 1.468520 CAGGTAACATCCTGCAAACCG 59.531 52.381 0.00 0.00 46.53 4.44
65 66 1.349688 AGGTAACATCCTGCAAACCGA 59.650 47.619 0.00 0.00 36.35 4.69
66 67 2.026262 AGGTAACATCCTGCAAACCGAT 60.026 45.455 0.00 0.00 36.35 4.18
67 68 2.097466 GGTAACATCCTGCAAACCGATG 59.903 50.000 9.85 9.85 39.44 3.84
68 69 1.909700 AACATCCTGCAAACCGATGT 58.090 45.000 10.84 10.84 46.54 3.06
69 70 1.909700 ACATCCTGCAAACCGATGTT 58.090 45.000 10.84 0.00 43.05 2.71
70 71 1.812571 ACATCCTGCAAACCGATGTTC 59.187 47.619 10.84 0.00 43.05 3.18
71 72 2.086869 CATCCTGCAAACCGATGTTCT 58.913 47.619 0.00 0.00 32.15 3.01
72 73 1.522668 TCCTGCAAACCGATGTTCTG 58.477 50.000 0.00 0.00 32.15 3.02
73 74 0.523072 CCTGCAAACCGATGTTCTGG 59.477 55.000 0.00 0.00 32.15 3.86
74 75 1.238439 CTGCAAACCGATGTTCTGGT 58.762 50.000 0.00 0.00 41.20 4.00
75 76 1.197721 CTGCAAACCGATGTTCTGGTC 59.802 52.381 0.00 0.00 37.54 4.02
76 77 0.165944 GCAAACCGATGTTCTGGTCG 59.834 55.000 0.00 0.00 37.54 4.79
77 78 1.790755 CAAACCGATGTTCTGGTCGA 58.209 50.000 0.00 0.00 40.11 4.20
78 79 1.726791 CAAACCGATGTTCTGGTCGAG 59.273 52.381 0.00 0.00 40.11 4.04
79 80 0.246635 AACCGATGTTCTGGTCGAGG 59.753 55.000 0.00 0.00 40.11 4.63
80 81 1.519455 CCGATGTTCTGGTCGAGGC 60.519 63.158 0.00 0.00 40.11 4.70
81 82 1.519455 CGATGTTCTGGTCGAGGCC 60.519 63.158 0.00 0.00 40.11 5.19
82 83 1.153349 GATGTTCTGGTCGAGGCCC 60.153 63.158 0.00 0.00 0.00 5.80
83 84 2.907897 GATGTTCTGGTCGAGGCCCG 62.908 65.000 0.00 2.55 40.25 6.13
84 85 4.452733 GTTCTGGTCGAGGCCCGG 62.453 72.222 12.77 0.00 39.14 5.73
116 117 3.680786 CCAGCGAGGTGTCCACGA 61.681 66.667 9.50 0.00 39.84 4.35
117 118 2.430921 CAGCGAGGTGTCCACGAC 60.431 66.667 9.50 1.96 39.84 4.34
118 119 4.039357 AGCGAGGTGTCCACGACG 62.039 66.667 9.50 0.00 39.84 5.12
119 120 4.338539 GCGAGGTGTCCACGACGT 62.339 66.667 9.50 0.00 39.84 4.34
120 121 2.333938 CGAGGTGTCCACGACGTT 59.666 61.111 0.00 0.00 39.84 3.99
121 122 2.014554 CGAGGTGTCCACGACGTTG 61.015 63.158 0.00 0.00 39.84 4.10
122 123 1.066918 GAGGTGTCCACGACGTTGT 59.933 57.895 1.48 1.48 34.95 3.32
123 124 0.311790 GAGGTGTCCACGACGTTGTA 59.688 55.000 8.44 0.00 34.95 2.41
124 125 0.313043 AGGTGTCCACGACGTTGTAG 59.687 55.000 8.44 0.68 34.95 2.74
125 126 0.665369 GGTGTCCACGACGTTGTAGG 60.665 60.000 8.44 12.41 34.95 3.18
126 127 1.007038 TGTCCACGACGTTGTAGGC 60.007 57.895 8.44 3.13 34.95 3.93
127 128 2.084681 GTCCACGACGTTGTAGGCG 61.085 63.158 8.44 0.00 0.00 5.52
128 129 3.475774 CCACGACGTTGTAGGCGC 61.476 66.667 8.44 0.00 0.00 6.53
129 130 2.731721 CACGACGTTGTAGGCGCA 60.732 61.111 10.83 0.00 0.00 6.09
130 131 2.092291 CACGACGTTGTAGGCGCAT 61.092 57.895 10.83 3.98 0.00 4.73
131 132 2.092291 ACGACGTTGTAGGCGCATG 61.092 57.895 10.83 0.00 0.00 4.06
132 133 2.798501 CGACGTTGTAGGCGCATGG 61.799 63.158 10.83 0.00 0.00 3.66
133 134 3.095898 GACGTTGTAGGCGCATGGC 62.096 63.158 10.83 0.00 42.51 4.40
141 142 4.221422 GGCGCATGGCTCCTCGTA 62.221 66.667 10.83 0.00 42.94 3.43
142 143 2.659897 GCGCATGGCTCCTCGTAG 60.660 66.667 0.30 0.00 39.11 3.51
143 144 2.808315 CGCATGGCTCCTCGTAGT 59.192 61.111 0.00 0.00 0.00 2.73
144 145 1.141881 CGCATGGCTCCTCGTAGTT 59.858 57.895 0.00 0.00 0.00 2.24
145 146 1.148157 CGCATGGCTCCTCGTAGTTG 61.148 60.000 0.00 0.00 0.00 3.16
146 147 0.108138 GCATGGCTCCTCGTAGTTGT 60.108 55.000 0.00 0.00 0.00 3.32
147 148 1.645034 CATGGCTCCTCGTAGTTGTG 58.355 55.000 0.00 0.00 0.00 3.33
148 149 0.108138 ATGGCTCCTCGTAGTTGTGC 60.108 55.000 0.00 0.00 0.00 4.57
149 150 1.185618 TGGCTCCTCGTAGTTGTGCT 61.186 55.000 0.00 0.00 0.00 4.40
150 151 0.458716 GGCTCCTCGTAGTTGTGCTC 60.459 60.000 0.00 0.00 0.00 4.26
151 152 0.798771 GCTCCTCGTAGTTGTGCTCG 60.799 60.000 0.00 0.00 0.00 5.03
152 153 0.179161 CTCCTCGTAGTTGTGCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
153 154 1.805945 CCTCGTAGTTGTGCTCGGC 60.806 63.158 0.00 0.00 0.00 5.54
154 155 1.080772 CTCGTAGTTGTGCTCGGCA 60.081 57.895 0.00 0.00 35.60 5.69
155 156 0.458543 CTCGTAGTTGTGCTCGGCAT 60.459 55.000 1.90 0.00 41.91 4.40
156 157 0.457853 TCGTAGTTGTGCTCGGCATC 60.458 55.000 1.90 0.00 41.91 3.91
157 158 0.735978 CGTAGTTGTGCTCGGCATCA 60.736 55.000 1.90 0.75 41.91 3.07
158 159 0.721718 GTAGTTGTGCTCGGCATCAC 59.278 55.000 1.90 2.94 41.91 3.06
159 160 0.320050 TAGTTGTGCTCGGCATCACA 59.680 50.000 1.90 0.22 41.91 3.58
160 161 0.534877 AGTTGTGCTCGGCATCACAA 60.535 50.000 10.74 10.74 46.97 3.33
161 162 1.948508 TTGTGCTCGGCATCACAAC 59.051 52.632 10.74 0.00 45.09 3.32
162 163 1.514678 TTGTGCTCGGCATCACAACC 61.515 55.000 10.74 0.00 45.09 3.77
167 168 2.358125 CGGCATCACAACCGTGGA 60.358 61.111 0.00 0.00 44.46 4.02
168 169 2.677003 CGGCATCACAACCGTGGAC 61.677 63.158 0.00 0.00 44.46 4.02
169 170 2.677003 GGCATCACAACCGTGGACG 61.677 63.158 0.00 0.00 43.79 4.79
184 185 3.735029 ACGGAGTCGCACTCGTCC 61.735 66.667 9.29 0.00 45.96 4.79
185 186 3.733960 CGGAGTCGCACTCGTCCA 61.734 66.667 9.29 0.00 45.96 4.02
186 187 2.126424 GGAGTCGCACTCGTCCAC 60.126 66.667 9.29 0.00 45.96 4.02
187 188 2.126424 GAGTCGCACTCGTCCACC 60.126 66.667 1.40 0.00 35.28 4.61
188 189 2.910479 AGTCGCACTCGTCCACCA 60.910 61.111 0.00 0.00 36.96 4.17
189 190 2.733593 GTCGCACTCGTCCACCAC 60.734 66.667 0.00 0.00 36.96 4.16
190 191 3.986006 TCGCACTCGTCCACCACC 61.986 66.667 0.00 0.00 36.96 4.61
191 192 3.991051 CGCACTCGTCCACCACCT 61.991 66.667 0.00 0.00 0.00 4.00
192 193 2.426023 GCACTCGTCCACCACCTT 59.574 61.111 0.00 0.00 0.00 3.50
193 194 1.227853 GCACTCGTCCACCACCTTT 60.228 57.895 0.00 0.00 0.00 3.11
194 195 0.034337 GCACTCGTCCACCACCTTTA 59.966 55.000 0.00 0.00 0.00 1.85
195 196 1.541670 GCACTCGTCCACCACCTTTAA 60.542 52.381 0.00 0.00 0.00 1.52
196 197 2.841215 CACTCGTCCACCACCTTTAAA 58.159 47.619 0.00 0.00 0.00 1.52
197 198 3.207778 CACTCGTCCACCACCTTTAAAA 58.792 45.455 0.00 0.00 0.00 1.52
198 199 3.628487 CACTCGTCCACCACCTTTAAAAA 59.372 43.478 0.00 0.00 0.00 1.94
199 200 4.277423 CACTCGTCCACCACCTTTAAAAAT 59.723 41.667 0.00 0.00 0.00 1.82
200 201 4.277423 ACTCGTCCACCACCTTTAAAAATG 59.723 41.667 0.00 0.00 0.00 2.32
201 202 3.004944 TCGTCCACCACCTTTAAAAATGC 59.995 43.478 0.00 0.00 0.00 3.56
202 203 3.243569 CGTCCACCACCTTTAAAAATGCA 60.244 43.478 0.00 0.00 0.00 3.96
203 204 4.306600 GTCCACCACCTTTAAAAATGCAG 58.693 43.478 0.00 0.00 0.00 4.41
204 205 3.323403 TCCACCACCTTTAAAAATGCAGG 59.677 43.478 0.00 0.00 0.00 4.85
205 206 3.323403 CCACCACCTTTAAAAATGCAGGA 59.677 43.478 0.00 0.00 0.00 3.86
206 207 4.202305 CCACCACCTTTAAAAATGCAGGAA 60.202 41.667 0.00 0.00 0.00 3.36
207 208 5.512921 CCACCACCTTTAAAAATGCAGGAAT 60.513 40.000 0.00 0.00 0.00 3.01
208 209 6.295575 CCACCACCTTTAAAAATGCAGGAATA 60.296 38.462 0.00 0.00 0.00 1.75
209 210 7.158021 CACCACCTTTAAAAATGCAGGAATAA 58.842 34.615 0.00 0.00 0.00 1.40
210 211 7.331687 CACCACCTTTAAAAATGCAGGAATAAG 59.668 37.037 0.00 0.00 0.00 1.73
211 212 7.234577 ACCACCTTTAAAAATGCAGGAATAAGA 59.765 33.333 0.00 0.00 0.00 2.10
212 213 8.093927 CCACCTTTAAAAATGCAGGAATAAGAA 58.906 33.333 0.00 0.00 0.00 2.52
213 214 9.487790 CACCTTTAAAAATGCAGGAATAAGAAA 57.512 29.630 0.00 0.00 0.00 2.52
225 226 9.859427 TGCAGGAATAAGAAAAACATAAGATTG 57.141 29.630 0.00 0.00 0.00 2.67
244 245 7.933215 AGATTGAAATGTCATGTTCATCTCA 57.067 32.000 9.69 5.88 33.90 3.27
245 246 8.344446 AGATTGAAATGTCATGTTCATCTCAA 57.656 30.769 17.42 17.42 36.91 3.02
246 247 8.967918 AGATTGAAATGTCATGTTCATCTCAAT 58.032 29.630 22.19 22.19 42.15 2.57
247 248 9.234384 GATTGAAATGTCATGTTCATCTCAATC 57.766 33.333 26.23 26.23 44.65 2.67
248 249 7.092137 TGAAATGTCATGTTCATCTCAATCC 57.908 36.000 7.01 0.00 0.00 3.01
249 250 6.888088 TGAAATGTCATGTTCATCTCAATCCT 59.112 34.615 7.01 0.00 0.00 3.24
250 251 8.048514 TGAAATGTCATGTTCATCTCAATCCTA 58.951 33.333 7.01 0.00 0.00 2.94
251 252 7.798596 AATGTCATGTTCATCTCAATCCTAC 57.201 36.000 0.00 0.00 0.00 3.18
252 253 6.298441 TGTCATGTTCATCTCAATCCTACA 57.702 37.500 0.00 0.00 0.00 2.74
253 254 6.710278 TGTCATGTTCATCTCAATCCTACAA 58.290 36.000 0.00 0.00 0.00 2.41
254 255 6.820152 TGTCATGTTCATCTCAATCCTACAAG 59.180 38.462 0.00 0.00 0.00 3.16
255 256 6.820656 GTCATGTTCATCTCAATCCTACAAGT 59.179 38.462 0.00 0.00 0.00 3.16
256 257 7.335422 GTCATGTTCATCTCAATCCTACAAGTT 59.665 37.037 0.00 0.00 0.00 2.66
257 258 7.884877 TCATGTTCATCTCAATCCTACAAGTTT 59.115 33.333 0.00 0.00 0.00 2.66
258 259 8.517878 CATGTTCATCTCAATCCTACAAGTTTT 58.482 33.333 0.00 0.00 0.00 2.43
259 260 7.874940 TGTTCATCTCAATCCTACAAGTTTTG 58.125 34.615 0.00 0.00 0.00 2.44
260 261 7.040478 TGTTCATCTCAATCCTACAAGTTTTGG 60.040 37.037 0.00 0.00 34.12 3.28
261 262 5.945784 TCATCTCAATCCTACAAGTTTTGGG 59.054 40.000 0.00 0.00 34.12 4.12
262 263 5.319043 TCTCAATCCTACAAGTTTTGGGT 57.681 39.130 0.00 0.00 34.12 4.51
263 264 5.701224 TCTCAATCCTACAAGTTTTGGGTT 58.299 37.500 0.00 0.00 34.12 4.11
264 265 5.534654 TCTCAATCCTACAAGTTTTGGGTTG 59.465 40.000 0.00 0.00 40.84 3.77
265 266 5.205056 TCAATCCTACAAGTTTTGGGTTGT 58.795 37.500 9.86 0.00 40.48 3.32
266 267 5.659079 TCAATCCTACAAGTTTTGGGTTGTT 59.341 36.000 9.86 0.00 40.48 2.83
267 268 6.155393 TCAATCCTACAAGTTTTGGGTTGTTT 59.845 34.615 9.86 0.00 40.48 2.83
268 269 5.331876 TCCTACAAGTTTTGGGTTGTTTG 57.668 39.130 0.00 0.00 37.96 2.93
269 270 5.017490 TCCTACAAGTTTTGGGTTGTTTGA 58.983 37.500 0.00 0.00 37.96 2.69
270 271 5.659079 TCCTACAAGTTTTGGGTTGTTTGAT 59.341 36.000 0.00 0.00 37.96 2.57
271 272 6.155393 TCCTACAAGTTTTGGGTTGTTTGATT 59.845 34.615 0.00 0.00 37.96 2.57
272 273 6.257630 CCTACAAGTTTTGGGTTGTTTGATTG 59.742 38.462 0.00 0.00 37.96 2.67
273 274 4.394610 ACAAGTTTTGGGTTGTTTGATTGC 59.605 37.500 0.00 0.00 32.93 3.56
274 275 4.213564 AGTTTTGGGTTGTTTGATTGCA 57.786 36.364 0.00 0.00 0.00 4.08
275 276 4.779696 AGTTTTGGGTTGTTTGATTGCAT 58.220 34.783 0.00 0.00 0.00 3.96
276 277 4.815846 AGTTTTGGGTTGTTTGATTGCATC 59.184 37.500 0.00 0.00 0.00 3.91
277 278 4.412796 TTTGGGTTGTTTGATTGCATCA 57.587 36.364 0.00 0.00 37.55 3.07
278 279 4.620589 TTGGGTTGTTTGATTGCATCAT 57.379 36.364 0.00 0.00 39.39 2.45
279 280 5.735285 TTGGGTTGTTTGATTGCATCATA 57.265 34.783 0.00 0.00 39.39 2.15
280 281 5.327616 TGGGTTGTTTGATTGCATCATAG 57.672 39.130 0.00 0.00 39.39 2.23
281 282 4.160065 TGGGTTGTTTGATTGCATCATAGG 59.840 41.667 0.00 0.00 39.39 2.57
282 283 4.402155 GGGTTGTTTGATTGCATCATAGGA 59.598 41.667 0.00 0.00 39.39 2.94
283 284 5.105392 GGGTTGTTTGATTGCATCATAGGAA 60.105 40.000 0.00 0.00 39.39 3.36
284 285 6.397272 GGTTGTTTGATTGCATCATAGGAAA 58.603 36.000 0.00 0.00 39.39 3.13
285 286 6.873076 GGTTGTTTGATTGCATCATAGGAAAA 59.127 34.615 0.00 0.00 39.39 2.29
286 287 7.387397 GGTTGTTTGATTGCATCATAGGAAAAA 59.613 33.333 0.00 0.00 39.39 1.94
287 288 7.887996 TGTTTGATTGCATCATAGGAAAAAC 57.112 32.000 0.00 0.00 39.39 2.43
288 289 7.440198 TGTTTGATTGCATCATAGGAAAAACA 58.560 30.769 0.00 0.00 39.39 2.83
289 290 8.095792 TGTTTGATTGCATCATAGGAAAAACAT 58.904 29.630 0.00 0.00 39.39 2.71
290 291 9.585099 GTTTGATTGCATCATAGGAAAAACATA 57.415 29.630 0.00 0.00 39.39 2.29
320 321 3.149196 TCAAAGAGGTTTGAGTGGATGC 58.851 45.455 0.00 0.00 45.82 3.91
321 322 3.152341 CAAAGAGGTTTGAGTGGATGCT 58.848 45.455 0.00 0.00 45.22 3.79
322 323 4.041567 TCAAAGAGGTTTGAGTGGATGCTA 59.958 41.667 0.00 0.00 45.82 3.49
323 324 3.902881 AGAGGTTTGAGTGGATGCTAG 57.097 47.619 0.00 0.00 0.00 3.42
324 325 3.445008 AGAGGTTTGAGTGGATGCTAGA 58.555 45.455 0.00 0.00 0.00 2.43
325 326 3.840666 AGAGGTTTGAGTGGATGCTAGAA 59.159 43.478 0.00 0.00 0.00 2.10
326 327 4.287067 AGAGGTTTGAGTGGATGCTAGAAA 59.713 41.667 0.00 0.00 0.00 2.52
327 328 5.045286 AGAGGTTTGAGTGGATGCTAGAAAT 60.045 40.000 0.00 0.00 0.00 2.17
328 329 5.574188 AGGTTTGAGTGGATGCTAGAAATT 58.426 37.500 0.00 0.00 0.00 1.82
329 330 5.649831 AGGTTTGAGTGGATGCTAGAAATTC 59.350 40.000 0.00 0.00 0.00 2.17
330 331 5.649831 GGTTTGAGTGGATGCTAGAAATTCT 59.350 40.000 0.00 0.00 0.00 2.40
331 332 6.823689 GGTTTGAGTGGATGCTAGAAATTCTA 59.176 38.462 2.44 2.44 0.00 2.10
332 333 7.500559 GGTTTGAGTGGATGCTAGAAATTCTAT 59.499 37.037 2.87 0.00 0.00 1.98
333 334 8.341173 GTTTGAGTGGATGCTAGAAATTCTATG 58.659 37.037 2.87 0.00 0.00 2.23
334 335 7.365497 TGAGTGGATGCTAGAAATTCTATGA 57.635 36.000 2.87 0.00 0.00 2.15
335 336 7.795047 TGAGTGGATGCTAGAAATTCTATGAA 58.205 34.615 2.87 0.00 0.00 2.57
336 337 7.712639 TGAGTGGATGCTAGAAATTCTATGAAC 59.287 37.037 2.87 0.00 0.00 3.18
337 338 7.568349 AGTGGATGCTAGAAATTCTATGAACA 58.432 34.615 2.87 1.21 0.00 3.18
338 339 8.216423 AGTGGATGCTAGAAATTCTATGAACAT 58.784 33.333 2.87 5.64 0.00 2.71
339 340 9.494271 GTGGATGCTAGAAATTCTATGAACATA 57.506 33.333 2.87 0.00 0.00 2.29
340 341 9.716531 TGGATGCTAGAAATTCTATGAACATAG 57.283 33.333 13.67 13.67 41.58 2.23
341 342 9.717942 GGATGCTAGAAATTCTATGAACATAGT 57.282 33.333 17.64 3.00 41.12 2.12
451 452 9.546428 AATCCTTCAAAAATTCCTTGTAAAGTG 57.454 29.630 1.42 0.00 44.25 3.16
452 453 7.496747 TCCTTCAAAAATTCCTTGTAAAGTGG 58.503 34.615 1.42 0.00 44.25 4.00
453 454 6.705825 CCTTCAAAAATTCCTTGTAAAGTGGG 59.294 38.462 1.42 0.00 44.25 4.61
454 455 6.168270 TCAAAAATTCCTTGTAAAGTGGGG 57.832 37.500 1.42 0.00 44.25 4.96
455 456 4.617253 AAAATTCCTTGTAAAGTGGGGC 57.383 40.909 0.00 0.00 44.25 5.80
456 457 2.990740 ATTCCTTGTAAAGTGGGGCA 57.009 45.000 0.00 0.00 44.25 5.36
457 458 2.757894 TTCCTTGTAAAGTGGGGCAA 57.242 45.000 0.00 0.00 44.25 4.52
458 459 2.757894 TCCTTGTAAAGTGGGGCAAA 57.242 45.000 0.00 0.00 44.25 3.68
459 460 3.252554 TCCTTGTAAAGTGGGGCAAAT 57.747 42.857 0.00 0.00 44.25 2.32
460 461 3.161866 TCCTTGTAAAGTGGGGCAAATC 58.838 45.455 0.00 0.00 44.25 2.17
461 462 2.896685 CCTTGTAAAGTGGGGCAAATCA 59.103 45.455 0.00 0.00 44.25 2.57
462 463 3.515104 CCTTGTAAAGTGGGGCAAATCAT 59.485 43.478 0.00 0.00 44.25 2.45
463 464 4.381932 CCTTGTAAAGTGGGGCAAATCATC 60.382 45.833 0.00 0.00 44.25 2.92
464 465 4.046286 TGTAAAGTGGGGCAAATCATCT 57.954 40.909 0.00 0.00 0.00 2.90
465 466 5.186256 TGTAAAGTGGGGCAAATCATCTA 57.814 39.130 0.00 0.00 0.00 1.98
466 467 5.575157 TGTAAAGTGGGGCAAATCATCTAA 58.425 37.500 0.00 0.00 0.00 2.10
467 468 6.194235 TGTAAAGTGGGGCAAATCATCTAAT 58.806 36.000 0.00 0.00 0.00 1.73
468 469 5.859205 AAAGTGGGGCAAATCATCTAATC 57.141 39.130 0.00 0.00 0.00 1.75
469 470 3.837355 AGTGGGGCAAATCATCTAATCC 58.163 45.455 0.00 0.00 0.00 3.01
470 471 2.893489 GTGGGGCAAATCATCTAATCCC 59.107 50.000 0.00 0.00 0.00 3.85
471 472 2.529632 GGGGCAAATCATCTAATCCCC 58.470 52.381 0.00 0.00 44.32 4.81
472 473 2.529632 GGGCAAATCATCTAATCCCCC 58.470 52.381 0.00 0.00 0.00 5.40
486 487 4.447342 CCCCCATCCTGGCACACC 62.447 72.222 0.00 0.00 35.79 4.16
487 488 3.341629 CCCCATCCTGGCACACCT 61.342 66.667 0.00 0.00 35.79 4.00
488 489 2.000701 CCCCATCCTGGCACACCTA 61.001 63.158 0.00 0.00 35.79 3.08
489 490 1.224592 CCCATCCTGGCACACCTAC 59.775 63.158 0.00 0.00 35.79 3.18
490 491 1.224592 CCATCCTGGCACACCTACC 59.775 63.158 0.00 0.00 36.63 3.18
491 492 1.224592 CATCCTGGCACACCTACCC 59.775 63.158 0.00 0.00 36.63 3.69
492 493 1.229820 ATCCTGGCACACCTACCCA 60.230 57.895 0.00 0.00 36.63 4.51
493 494 1.562672 ATCCTGGCACACCTACCCAC 61.563 60.000 0.00 0.00 36.63 4.61
494 495 2.224159 CCTGGCACACCTACCCACT 61.224 63.158 0.00 0.00 36.63 4.00
495 496 1.003355 CTGGCACACCTACCCACTG 60.003 63.158 0.00 0.00 36.63 3.66
496 497 1.768482 TGGCACACCTACCCACTGT 60.768 57.895 0.00 0.00 36.63 3.55
497 498 0.472161 TGGCACACCTACCCACTGTA 60.472 55.000 0.00 0.00 36.63 2.74
498 499 0.249398 GGCACACCTACCCACTGTAG 59.751 60.000 0.00 0.00 45.55 2.74
499 500 0.974383 GCACACCTACCCACTGTAGT 59.026 55.000 0.00 0.00 44.66 2.73
500 501 1.337823 GCACACCTACCCACTGTAGTG 60.338 57.143 5.05 5.05 44.66 2.74
512 513 3.222173 ACTGTAGTGATTTTGGGTGCA 57.778 42.857 0.00 0.00 0.00 4.57
513 514 3.766545 ACTGTAGTGATTTTGGGTGCAT 58.233 40.909 0.00 0.00 0.00 3.96
514 515 3.758554 ACTGTAGTGATTTTGGGTGCATC 59.241 43.478 0.00 0.00 0.00 3.91
515 516 3.088532 TGTAGTGATTTTGGGTGCATCC 58.911 45.455 9.82 9.82 0.00 3.51
516 517 1.176527 AGTGATTTTGGGTGCATCCG 58.823 50.000 12.39 0.00 37.00 4.18
517 518 1.173043 GTGATTTTGGGTGCATCCGA 58.827 50.000 12.39 6.70 37.00 4.55
518 519 1.543802 GTGATTTTGGGTGCATCCGAA 59.456 47.619 15.19 15.19 37.00 4.30
519 520 1.543802 TGATTTTGGGTGCATCCGAAC 59.456 47.619 18.87 8.83 33.75 3.95
520 521 0.894835 ATTTTGGGTGCATCCGAACC 59.105 50.000 18.87 0.00 33.75 3.62
521 522 0.468214 TTTTGGGTGCATCCGAACCA 60.468 50.000 18.87 1.84 38.27 3.67
522 523 0.893270 TTTGGGTGCATCCGAACCAG 60.893 55.000 15.19 0.00 38.27 4.00
523 524 1.773856 TTGGGTGCATCCGAACCAGA 61.774 55.000 12.39 0.00 38.27 3.86
524 525 1.450312 GGGTGCATCCGAACCAGAG 60.450 63.158 0.00 0.00 38.27 3.35
525 526 2.109126 GGTGCATCCGAACCAGAGC 61.109 63.158 0.00 0.00 36.41 4.09
526 527 1.375908 GTGCATCCGAACCAGAGCA 60.376 57.895 0.00 0.00 0.00 4.26
527 528 1.375908 TGCATCCGAACCAGAGCAC 60.376 57.895 0.00 0.00 0.00 4.40
528 529 2.109126 GCATCCGAACCAGAGCACC 61.109 63.158 0.00 0.00 0.00 5.01
529 530 1.811266 CATCCGAACCAGAGCACCG 60.811 63.158 0.00 0.00 0.00 4.94
530 531 1.982395 ATCCGAACCAGAGCACCGA 60.982 57.895 0.00 0.00 0.00 4.69
531 532 1.949847 ATCCGAACCAGAGCACCGAG 61.950 60.000 0.00 0.00 0.00 4.63
532 533 2.651361 CGAACCAGAGCACCGAGT 59.349 61.111 0.00 0.00 0.00 4.18
533 534 1.444553 CGAACCAGAGCACCGAGTC 60.445 63.158 0.00 0.00 0.00 3.36
534 535 1.444553 GAACCAGAGCACCGAGTCG 60.445 63.158 5.29 5.29 0.00 4.18
535 536 3.575351 AACCAGAGCACCGAGTCGC 62.575 63.158 7.12 0.00 0.00 5.19
536 537 4.803426 CCAGAGCACCGAGTCGCC 62.803 72.222 7.12 0.00 0.00 5.54
537 538 4.803426 CAGAGCACCGAGTCGCCC 62.803 72.222 7.12 0.00 0.00 6.13
542 543 3.461773 CACCGAGTCGCCCCATCT 61.462 66.667 7.12 0.00 0.00 2.90
543 544 3.148279 ACCGAGTCGCCCCATCTC 61.148 66.667 7.12 0.00 0.00 2.75
544 545 3.917760 CCGAGTCGCCCCATCTCC 61.918 72.222 7.12 0.00 0.00 3.71
545 546 2.835431 CGAGTCGCCCCATCTCCT 60.835 66.667 0.00 0.00 0.00 3.69
546 547 2.818132 GAGTCGCCCCATCTCCTG 59.182 66.667 0.00 0.00 0.00 3.86
547 548 2.765807 AGTCGCCCCATCTCCTGG 60.766 66.667 0.00 0.00 45.51 4.45
548 549 3.083997 GTCGCCCCATCTCCTGGT 61.084 66.667 0.00 0.00 44.30 4.00
549 550 3.083349 TCGCCCCATCTCCTGGTG 61.083 66.667 0.00 0.00 44.30 4.17
550 551 3.083349 CGCCCCATCTCCTGGTGA 61.083 66.667 0.28 0.28 44.30 4.02
551 552 2.446848 CGCCCCATCTCCTGGTGAT 61.447 63.158 5.45 5.45 44.30 3.06
552 553 1.925888 GCCCCATCTCCTGGTGATT 59.074 57.895 8.48 0.00 44.30 2.57
553 554 0.259938 GCCCCATCTCCTGGTGATTT 59.740 55.000 8.48 0.00 44.30 2.17
554 555 1.752084 GCCCCATCTCCTGGTGATTTC 60.752 57.143 8.48 0.00 44.30 2.17
555 556 1.565759 CCCCATCTCCTGGTGATTTCA 59.434 52.381 8.48 0.00 44.30 2.69
556 557 2.648059 CCCATCTCCTGGTGATTTCAC 58.352 52.381 8.48 1.99 44.30 3.18
557 558 2.240667 CCCATCTCCTGGTGATTTCACT 59.759 50.000 8.48 0.00 44.30 3.41
558 559 3.276857 CCATCTCCTGGTGATTTCACTG 58.723 50.000 8.48 0.00 45.73 3.66
559 560 2.479566 TCTCCTGGTGATTTCACTGC 57.520 50.000 10.32 0.00 45.73 4.40
560 561 1.699083 TCTCCTGGTGATTTCACTGCA 59.301 47.619 10.32 0.92 45.73 4.41
561 562 2.306805 TCTCCTGGTGATTTCACTGCAT 59.693 45.455 10.32 0.00 45.73 3.96
562 563 2.422479 CTCCTGGTGATTTCACTGCATG 59.578 50.000 10.32 0.00 45.73 4.06
563 564 2.040145 TCCTGGTGATTTCACTGCATGA 59.960 45.455 10.32 1.88 45.73 3.07
564 565 2.163010 CCTGGTGATTTCACTGCATGAC 59.837 50.000 10.32 0.00 45.73 3.06
565 566 3.079578 CTGGTGATTTCACTGCATGACT 58.920 45.455 10.32 0.00 45.73 3.41
566 567 3.076621 TGGTGATTTCACTGCATGACTC 58.923 45.455 10.32 0.00 45.73 3.36
567 568 2.421424 GGTGATTTCACTGCATGACTCC 59.579 50.000 10.32 0.00 45.73 3.85
568 569 2.421424 GTGATTTCACTGCATGACTCCC 59.579 50.000 0.00 0.00 43.25 4.30
569 570 2.306805 TGATTTCACTGCATGACTCCCT 59.693 45.455 0.00 0.00 36.92 4.20
570 571 2.957402 TTTCACTGCATGACTCCCTT 57.043 45.000 0.00 0.00 36.92 3.95
571 572 2.479566 TTCACTGCATGACTCCCTTC 57.520 50.000 0.00 0.00 36.92 3.46
572 573 0.247460 TCACTGCATGACTCCCTTCG 59.753 55.000 0.00 0.00 29.99 3.79
573 574 0.247460 CACTGCATGACTCCCTTCGA 59.753 55.000 0.00 0.00 0.00 3.71
574 575 1.134580 CACTGCATGACTCCCTTCGAT 60.135 52.381 0.00 0.00 0.00 3.59
575 576 2.101415 CACTGCATGACTCCCTTCGATA 59.899 50.000 0.00 0.00 0.00 2.92
576 577 2.968574 ACTGCATGACTCCCTTCGATAT 59.031 45.455 0.00 0.00 0.00 1.63
577 578 3.006323 ACTGCATGACTCCCTTCGATATC 59.994 47.826 0.00 0.00 0.00 1.63
578 579 2.029918 TGCATGACTCCCTTCGATATCG 60.030 50.000 19.14 19.14 41.45 2.92
579 580 2.029828 GCATGACTCCCTTCGATATCGT 60.030 50.000 23.61 3.37 40.80 3.73
580 581 3.190744 GCATGACTCCCTTCGATATCGTA 59.809 47.826 23.61 14.25 40.80 3.43
581 582 4.142359 GCATGACTCCCTTCGATATCGTAT 60.142 45.833 23.61 0.00 40.80 3.06
582 583 5.622460 GCATGACTCCCTTCGATATCGTATT 60.622 44.000 23.61 3.82 40.80 1.89
583 584 6.390721 CATGACTCCCTTCGATATCGTATTT 58.609 40.000 23.61 4.33 40.80 1.40
584 585 5.769367 TGACTCCCTTCGATATCGTATTTG 58.231 41.667 23.61 13.21 40.80 2.32
604 605 9.420551 GTATTTGCTATATACTAGTGGTTGGAC 57.579 37.037 5.39 0.00 0.00 4.02
634 635 2.126914 CGTATCGCTTGAGAGGAAGG 57.873 55.000 0.00 0.00 0.00 3.46
643 644 2.029844 GAGAGGAAGGTGTGTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
647 650 2.713154 GAAGGTGTGTGCGCGTTT 59.287 55.556 8.43 0.00 33.97 3.60
729 732 5.352569 CACATCAACCAACTAGCTTAAGAGG 59.647 44.000 6.67 0.21 0.00 3.69
746 749 7.095187 GCTTAAGAGGACATCTCGAAAAGAAAA 60.095 37.037 6.67 0.00 46.82 2.29
747 750 6.793492 AAGAGGACATCTCGAAAAGAAAAG 57.207 37.500 0.00 0.00 46.82 2.27
1084 1106 1.258445 GGAGGCCTTCGGAGACTCAA 61.258 60.000 6.77 0.00 34.32 3.02
1137 1159 3.166490 TAGCACGCCACCGGTTCAA 62.166 57.895 2.97 0.00 39.22 2.69
1269 1291 2.754658 CGAGGTGAGTAGCCGGGT 60.755 66.667 12.58 12.58 0.00 5.28
1332 1354 3.119495 GCACTGTGTCCATATTTGGTTCC 60.119 47.826 9.86 0.00 44.06 3.62
1354 1376 2.579860 AGCCACCAAATCTCAGAGGAAT 59.420 45.455 0.00 0.00 0.00 3.01
1355 1377 3.011032 AGCCACCAAATCTCAGAGGAATT 59.989 43.478 0.00 0.00 0.00 2.17
1357 1379 4.221482 GCCACCAAATCTCAGAGGAATTTT 59.779 41.667 0.00 0.00 0.00 1.82
1358 1380 5.279657 GCCACCAAATCTCAGAGGAATTTTT 60.280 40.000 0.00 0.00 0.00 1.94
1408 1430 3.223435 AGGTCTAGCTTGCTATCGCTTA 58.777 45.455 2.59 0.00 37.68 3.09
1447 1469 7.809665 TGTGTATGAGATGATTCAAAGTGTTG 58.190 34.615 0.00 0.00 35.95 3.33
1487 1512 5.443185 TCTTTTGCAGAAGAATGGTTCAG 57.557 39.130 16.75 0.00 32.95 3.02
1512 1537 5.590663 TGATGCACACAACCAAGTAACTTTA 59.409 36.000 0.00 0.00 0.00 1.85
1538 1563 3.201290 CCCTCGATTGTTTCAGATCTGG 58.799 50.000 22.42 4.04 0.00 3.86
1539 1564 3.201290 CCTCGATTGTTTCAGATCTGGG 58.799 50.000 22.42 7.80 0.00 4.45
1542 1567 4.905429 TCGATTGTTTCAGATCTGGGAAA 58.095 39.130 22.42 13.41 0.00 3.13
1546 1571 5.710513 TTGTTTCAGATCTGGGAAATGTG 57.289 39.130 22.42 0.00 35.66 3.21
1567 1738 5.088739 GTGCTTTACATTTTCATCAGTCGG 58.911 41.667 0.00 0.00 0.00 4.79
1583 1754 6.928979 TCAGTCGGTTTTAATGTTGAGAAA 57.071 33.333 0.00 0.00 0.00 2.52
1691 1863 2.535012 TGCGTTGGTAGTGTTGATGA 57.465 45.000 0.00 0.00 0.00 2.92
1692 1864 3.052455 TGCGTTGGTAGTGTTGATGAT 57.948 42.857 0.00 0.00 0.00 2.45
1693 1865 2.741517 TGCGTTGGTAGTGTTGATGATG 59.258 45.455 0.00 0.00 0.00 3.07
1705 1877 2.749076 GTTGATGATGCTAGTGTTGGCA 59.251 45.455 0.00 0.00 45.33 4.92
1755 1927 3.410631 TGTCCTTTGCCGTCAGATTTA 57.589 42.857 0.00 0.00 0.00 1.40
1796 1968 6.586868 TTTTGATCAACTGATTGCAAACAC 57.413 33.333 7.89 0.00 35.63 3.32
1815 1987 2.236146 CACATACAAGCCAGGTGAGGTA 59.764 50.000 0.00 0.00 29.37 3.08
1816 1988 3.115390 ACATACAAGCCAGGTGAGGTAT 58.885 45.455 0.00 0.00 0.00 2.73
1823 1995 1.282157 GCCAGGTGAGGTATGGAACTT 59.718 52.381 0.00 0.00 36.09 2.66
1831 2004 7.281100 CAGGTGAGGTATGGAACTTTTATTCTC 59.719 40.741 0.00 0.00 0.00 2.87
1835 2008 6.901300 AGGTATGGAACTTTTATTCTCCTCC 58.099 40.000 0.00 0.00 0.00 4.30
1966 2140 9.040939 CGGGATACAATTTTCTTTTCTTTTTGT 57.959 29.630 0.00 0.00 39.74 2.83
2068 2242 2.651232 CGCTTCGACGACGGGATC 60.651 66.667 12.27 0.00 40.21 3.36
2197 2371 0.550914 TGAACCCAGGCTCACTTGTT 59.449 50.000 0.00 0.00 0.00 2.83
2274 2448 0.473326 GCTCAGCTCTGGAATGGGAT 59.527 55.000 0.00 0.00 0.00 3.85
2389 2563 6.464895 AATGTTATCGTTTTGGCAATGTTG 57.535 33.333 0.00 0.00 0.00 3.33
2390 2564 4.938080 TGTTATCGTTTTGGCAATGTTGT 58.062 34.783 0.00 0.00 0.00 3.32
2396 2570 4.519350 TCGTTTTGGCAATGTTGTATACCA 59.481 37.500 0.00 0.00 0.00 3.25
2404 2578 9.593134 TTGGCAATGTTGTATACCAATTATTTC 57.407 29.630 0.00 0.00 35.02 2.17
2442 2616 7.606456 TGGAGAAGTTTAATTAGGTTGCTACAG 59.394 37.037 0.00 0.00 0.00 2.74
2444 2618 9.216117 GAGAAGTTTAATTAGGTTGCTACAGAA 57.784 33.333 0.00 0.00 0.00 3.02
2462 2636 7.201384 GCTACAGAAAATCAGCTAAATGTTTGC 60.201 37.037 0.00 0.00 0.00 3.68
2527 2703 7.801716 TTGTTGACTGTTTAGAAACTATGCT 57.198 32.000 6.69 0.00 39.59 3.79
2538 2715 9.840427 GTTTAGAAACTATGCTTGCAAGATTTA 57.160 29.630 30.39 15.30 36.03 1.40
2565 2742 9.671279 TTTTTCTTTCTGCAGTCATATGATCTA 57.329 29.630 14.67 0.00 0.00 1.98
2566 2743 8.654230 TTTCTTTCTGCAGTCATATGATCTAC 57.346 34.615 14.67 4.00 0.00 2.59
2567 2744 7.594351 TCTTTCTGCAGTCATATGATCTACT 57.406 36.000 14.67 0.00 0.00 2.57
2568 2745 7.656412 TCTTTCTGCAGTCATATGATCTACTC 58.344 38.462 14.67 0.00 0.00 2.59
2569 2746 5.973899 TCTGCAGTCATATGATCTACTCC 57.026 43.478 14.67 0.00 0.00 3.85
2570 2747 4.769488 TCTGCAGTCATATGATCTACTCCC 59.231 45.833 14.67 0.00 0.00 4.30
2571 2748 4.745351 TGCAGTCATATGATCTACTCCCT 58.255 43.478 9.02 0.00 0.00 4.20
2572 2749 4.769488 TGCAGTCATATGATCTACTCCCTC 59.231 45.833 9.02 0.00 0.00 4.30
2573 2750 4.159506 GCAGTCATATGATCTACTCCCTCC 59.840 50.000 9.02 0.00 0.00 4.30
2574 2751 4.397730 CAGTCATATGATCTACTCCCTCCG 59.602 50.000 9.02 0.00 0.00 4.63
2575 2752 4.043561 AGTCATATGATCTACTCCCTCCGT 59.956 45.833 9.02 0.00 0.00 4.69
2576 2753 4.396790 GTCATATGATCTACTCCCTCCGTC 59.603 50.000 9.02 0.00 0.00 4.79
2577 2754 2.296073 ATGATCTACTCCCTCCGTCC 57.704 55.000 0.00 0.00 0.00 4.79
2578 2755 0.185416 TGATCTACTCCCTCCGTCCC 59.815 60.000 0.00 0.00 0.00 4.46
2579 2756 0.185416 GATCTACTCCCTCCGTCCCA 59.815 60.000 0.00 0.00 0.00 4.37
2580 2757 0.635009 ATCTACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
2581 2758 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
2582 2759 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
2583 2760 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
2584 2761 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2585 2762 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2586 2763 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2587 2764 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2588 2765 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2589 2766 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2590 2767 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2591 2768 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2592 2769 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2593 2770 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2594 2771 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2595 2772 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2596 2773 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
2597 2774 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
2598 2775 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
2599 2776 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
2600 2777 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
2601 2778 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
2602 2779 8.576442 CCCAAAATAAGTGTCTCAACTTTGTAT 58.424 33.333 0.00 0.00 40.77 2.29
2610 2787 8.191534 AGTGTCTCAACTTTGTATACTAAGGT 57.808 34.615 24.53 18.68 33.93 3.50
2611 2788 8.088981 AGTGTCTCAACTTTGTATACTAAGGTG 58.911 37.037 28.54 28.54 44.11 4.00
2612 2789 7.331193 GTGTCTCAACTTTGTATACTAAGGTGG 59.669 40.741 31.37 24.52 43.35 4.61
2613 2790 7.233962 TGTCTCAACTTTGTATACTAAGGTGGA 59.766 37.037 31.37 25.76 43.35 4.02
2614 2791 7.760340 GTCTCAACTTTGTATACTAAGGTGGAG 59.240 40.741 31.37 26.61 43.35 3.86
2615 2792 7.672660 TCTCAACTTTGTATACTAAGGTGGAGA 59.327 37.037 31.37 27.75 43.35 3.71
2616 2793 7.609056 TCAACTTTGTATACTAAGGTGGAGAC 58.391 38.462 31.37 0.00 43.35 3.36
2617 2794 7.233962 TCAACTTTGTATACTAAGGTGGAGACA 59.766 37.037 31.37 17.38 43.35 3.41
2631 2808 4.715534 TGGAGACACTTATTTTGGGACA 57.284 40.909 0.00 0.00 33.40 4.02
2632 2809 4.651778 TGGAGACACTTATTTTGGGACAG 58.348 43.478 0.00 0.00 35.02 3.51
2633 2810 4.349636 TGGAGACACTTATTTTGGGACAGA 59.650 41.667 0.00 0.00 35.02 3.41
2634 2811 4.938226 GGAGACACTTATTTTGGGACAGAG 59.062 45.833 0.00 0.00 42.39 3.35
2635 2812 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
2636 2813 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
2637 2814 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
2638 2815 4.263506 ACACTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
2639 2816 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
2640 2817 5.045869 CACTTATTTTGGGACAGAGGGAGTA 60.046 44.000 0.00 0.00 42.39 2.59
2641 2818 5.731678 ACTTATTTTGGGACAGAGGGAGTAT 59.268 40.000 0.00 0.00 42.39 2.12
2642 2819 6.906901 ACTTATTTTGGGACAGAGGGAGTATA 59.093 38.462 0.00 0.00 42.39 1.47
2651 2828 7.349859 TGGGACAGAGGGAGTATAAAATATTGT 59.650 37.037 0.00 0.00 0.00 2.71
2655 2832 8.701895 ACAGAGGGAGTATAAAATATTGTCGAA 58.298 33.333 0.00 0.00 0.00 3.71
2661 2838 7.307811 GGAGTATAAAATATTGTCGAACCAGGC 60.308 40.741 0.00 0.00 0.00 4.85
2686 2866 8.840321 GCTGTAATACATGAATACACCAATTCT 58.160 33.333 0.00 0.00 36.90 2.40
2693 2873 7.851228 ACATGAATACACCAATTCTCTAGTCA 58.149 34.615 0.00 0.00 36.90 3.41
2698 2878 4.748892 ACACCAATTCTCTAGTCATGACG 58.251 43.478 19.85 7.28 36.20 4.35
2711 2891 7.027760 TCTAGTCATGACGTTAGTTGTTGATC 58.972 38.462 19.85 0.00 36.20 2.92
2712 2892 5.784177 AGTCATGACGTTAGTTGTTGATCT 58.216 37.500 19.85 0.00 36.20 2.75
2749 2929 9.631257 ATCAGTTGATCATGGTGATATTTACAA 57.369 29.630 11.39 0.00 37.20 2.41
2761 2941 6.204882 GGTGATATTTACAACCATCCTAGCAC 59.795 42.308 0.00 0.00 0.00 4.40
2762 2942 6.204882 GTGATATTTACAACCATCCTAGCACC 59.795 42.308 0.00 0.00 0.00 5.01
2887 3070 1.278985 TGGTGATGGCTCAGTAACTGG 59.721 52.381 0.00 0.00 31.51 4.00
2903 3086 3.959495 ACTGGGCCTCATACATGATTT 57.041 42.857 4.53 0.00 36.02 2.17
2974 3157 2.031163 GCGGTAGCAGGGCATAGG 59.969 66.667 0.00 0.00 44.35 2.57
2975 3158 2.743718 CGGTAGCAGGGCATAGGG 59.256 66.667 0.00 0.00 0.00 3.53
2977 3160 0.830444 CGGTAGCAGGGCATAGGGTA 60.830 60.000 0.00 0.00 0.00 3.69
2997 3180 0.250553 TTCGGTTGCTTGGGAACGAT 60.251 50.000 0.00 0.00 0.00 3.73
3012 3196 3.242291 GATCCGCCCAGGGGTAGG 61.242 72.222 7.91 10.98 41.52 3.18
3045 3238 0.324943 CACCGAACCCTCCATTCACT 59.675 55.000 0.00 0.00 0.00 3.41
3063 3256 2.480419 CACTCTAAGGCCAACTTCAACG 59.520 50.000 5.01 0.00 40.64 4.10
3066 3259 1.464997 CTAAGGCCAACTTCAACGCTC 59.535 52.381 5.01 0.00 40.64 5.03
3073 3266 0.759346 AACTTCAACGCTCAGACCCT 59.241 50.000 0.00 0.00 0.00 4.34
3077 3270 2.450609 TCAACGCTCAGACCCTAAAC 57.549 50.000 0.00 0.00 0.00 2.01
3078 3271 1.689813 TCAACGCTCAGACCCTAAACA 59.310 47.619 0.00 0.00 0.00 2.83
3079 3272 2.069273 CAACGCTCAGACCCTAAACAG 58.931 52.381 0.00 0.00 0.00 3.16
3081 3274 2.180276 ACGCTCAGACCCTAAACAGAT 58.820 47.619 0.00 0.00 0.00 2.90
3085 3278 3.196685 GCTCAGACCCTAAACAGATGTCT 59.803 47.826 0.00 0.00 36.77 3.41
3112 3305 6.945938 TTCTTTAGATTTTGTCCGTTTGGA 57.054 33.333 0.00 0.00 43.88 3.53
3143 3336 1.419374 GACACACACGTCCAGATGTC 58.581 55.000 0.00 0.00 0.00 3.06
3147 3340 0.732880 CACACGTCCAGATGTCGTCC 60.733 60.000 0.00 0.00 35.62 4.79
3168 3361 1.893808 CGGCCGCTGCATCCTAAAT 60.894 57.895 14.67 0.00 40.13 1.40
3177 3370 4.617995 CGCTGCATCCTAAATTTTTGTCCA 60.618 41.667 0.00 0.00 0.00 4.02
3272 3471 5.359194 AGTGTTACTATTCATCACCCAGG 57.641 43.478 0.00 0.00 0.00 4.45
3273 3472 4.164221 AGTGTTACTATTCATCACCCAGGG 59.836 45.833 2.85 2.85 0.00 4.45
3274 3473 4.080526 GTGTTACTATTCATCACCCAGGGT 60.081 45.833 4.76 4.76 35.62 4.34
3285 3484 1.372501 ACCCAGGGTGCAGAATAAGT 58.627 50.000 11.70 0.00 32.98 2.24
3286 3485 1.710809 ACCCAGGGTGCAGAATAAGTT 59.289 47.619 11.70 0.00 32.98 2.66
3287 3486 2.916934 ACCCAGGGTGCAGAATAAGTTA 59.083 45.455 11.70 0.00 32.98 2.24
3288 3487 3.527665 ACCCAGGGTGCAGAATAAGTTAT 59.472 43.478 11.70 0.00 32.98 1.89
3289 3488 4.017499 ACCCAGGGTGCAGAATAAGTTATT 60.017 41.667 11.70 7.87 32.98 1.40
3290 3489 4.580580 CCCAGGGTGCAGAATAAGTTATTC 59.419 45.833 22.80 22.80 43.77 1.75
3291 3490 8.008283 ACCCAGGGTGCAGAATAAGTTATTCT 62.008 42.308 25.91 25.91 44.21 2.40
3292 3491 9.397480 ACCCAGGGTGCAGAATAAGTTATTCTT 62.397 40.741 28.07 14.74 42.47 2.52
3301 3500 6.846325 GAATAAGTTATTCTTCACCCGAGG 57.154 41.667 22.93 0.00 41.00 4.63
3302 3501 5.952347 ATAAGTTATTCTTCACCCGAGGT 57.048 39.130 0.00 0.00 37.56 3.85
3303 3502 7.427989 AATAAGTTATTCTTCACCCGAGGTA 57.572 36.000 2.10 0.00 37.56 3.08
3304 3503 5.750352 AAGTTATTCTTCACCCGAGGTAA 57.250 39.130 0.00 0.00 32.11 2.85
3305 3504 5.952347 AGTTATTCTTCACCCGAGGTAAT 57.048 39.130 0.00 0.00 32.11 1.89
3306 3505 6.309389 AGTTATTCTTCACCCGAGGTAATT 57.691 37.500 0.00 0.00 32.11 1.40
3307 3506 6.718294 AGTTATTCTTCACCCGAGGTAATTT 58.282 36.000 0.00 0.00 32.11 1.82
3308 3507 7.173032 AGTTATTCTTCACCCGAGGTAATTTT 58.827 34.615 0.00 0.00 32.11 1.82
3309 3508 8.323567 AGTTATTCTTCACCCGAGGTAATTTTA 58.676 33.333 0.00 0.00 32.11 1.52
3310 3509 6.997239 ATTCTTCACCCGAGGTAATTTTAC 57.003 37.500 0.00 0.00 32.11 2.01
3311 3510 4.497300 TCTTCACCCGAGGTAATTTTACG 58.503 43.478 0.00 0.00 32.11 3.18
3312 3511 4.220382 TCTTCACCCGAGGTAATTTTACGA 59.780 41.667 0.00 0.00 32.11 3.43
3313 3512 4.741321 TCACCCGAGGTAATTTTACGAT 57.259 40.909 0.00 0.00 32.11 3.73
3314 3513 4.685924 TCACCCGAGGTAATTTTACGATC 58.314 43.478 0.00 0.00 32.11 3.69
3315 3514 4.160065 TCACCCGAGGTAATTTTACGATCA 59.840 41.667 0.00 0.00 32.11 2.92
3316 3515 5.054477 CACCCGAGGTAATTTTACGATCAT 58.946 41.667 0.00 0.00 32.11 2.45
3317 3516 5.526111 CACCCGAGGTAATTTTACGATCATT 59.474 40.000 0.00 0.00 32.11 2.57
3318 3517 6.037830 CACCCGAGGTAATTTTACGATCATTT 59.962 38.462 0.00 0.00 32.11 2.32
3319 3518 6.259387 ACCCGAGGTAATTTTACGATCATTTC 59.741 38.462 0.00 0.00 32.11 2.17
3320 3519 6.259167 CCCGAGGTAATTTTACGATCATTTCA 59.741 38.462 0.00 0.00 34.50 2.69
3321 3520 7.041372 CCCGAGGTAATTTTACGATCATTTCAT 60.041 37.037 0.00 0.00 34.50 2.57
3322 3521 8.984764 CCGAGGTAATTTTACGATCATTTCATA 58.015 33.333 0.00 0.00 34.50 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.929722 TTAGTTTGACAATATGAATATTCGTGC 57.070 29.630 18.60 7.63 30.91 5.34
9 10 9.725019 AGTGATCAGTTAGTTTGACAATATGAA 57.275 29.630 0.00 0.00 0.00 2.57
10 11 9.371136 GAGTGATCAGTTAGTTTGACAATATGA 57.629 33.333 4.13 0.00 0.00 2.15
11 12 8.323854 CGAGTGATCAGTTAGTTTGACAATATG 58.676 37.037 4.13 0.00 0.00 1.78
12 13 8.035394 ACGAGTGATCAGTTAGTTTGACAATAT 58.965 33.333 4.13 0.00 0.00 1.28
13 14 7.375834 ACGAGTGATCAGTTAGTTTGACAATA 58.624 34.615 4.13 0.00 0.00 1.90
14 15 6.223852 ACGAGTGATCAGTTAGTTTGACAAT 58.776 36.000 4.13 0.00 0.00 2.71
15 16 5.597806 ACGAGTGATCAGTTAGTTTGACAA 58.402 37.500 4.13 0.00 0.00 3.18
16 17 5.196341 ACGAGTGATCAGTTAGTTTGACA 57.804 39.130 4.13 0.00 0.00 3.58
17 18 5.220381 TGACGAGTGATCAGTTAGTTTGAC 58.780 41.667 4.13 0.00 0.00 3.18
18 19 5.240844 TCTGACGAGTGATCAGTTAGTTTGA 59.759 40.000 4.13 7.80 43.47 2.69
19 20 5.343593 GTCTGACGAGTGATCAGTTAGTTTG 59.656 44.000 4.13 5.93 43.47 2.93
20 21 5.462405 GTCTGACGAGTGATCAGTTAGTTT 58.538 41.667 4.13 0.00 43.47 2.66
21 22 4.082679 GGTCTGACGAGTGATCAGTTAGTT 60.083 45.833 4.13 0.00 43.47 2.24
22 23 3.440872 GGTCTGACGAGTGATCAGTTAGT 59.559 47.826 4.13 8.29 43.47 2.24
23 24 3.440522 TGGTCTGACGAGTGATCAGTTAG 59.559 47.826 4.13 5.06 43.47 2.34
24 25 3.418047 TGGTCTGACGAGTGATCAGTTA 58.582 45.455 4.13 0.00 43.47 2.24
25 26 2.230025 CTGGTCTGACGAGTGATCAGTT 59.770 50.000 11.19 0.00 43.47 3.16
26 27 1.815613 CTGGTCTGACGAGTGATCAGT 59.184 52.381 11.19 1.67 43.47 3.41
27 28 1.133982 CCTGGTCTGACGAGTGATCAG 59.866 57.143 16.92 9.34 44.22 2.90
28 29 1.177401 CCTGGTCTGACGAGTGATCA 58.823 55.000 16.92 0.00 0.00 2.92
29 30 1.178276 ACCTGGTCTGACGAGTGATC 58.822 55.000 16.92 0.00 0.00 2.92
30 31 2.492484 GTTACCTGGTCTGACGAGTGAT 59.508 50.000 16.92 6.44 0.00 3.06
31 32 1.884579 GTTACCTGGTCTGACGAGTGA 59.115 52.381 16.92 3.49 0.00 3.41
32 33 1.611977 TGTTACCTGGTCTGACGAGTG 59.388 52.381 16.92 11.41 0.00 3.51
33 34 1.991121 TGTTACCTGGTCTGACGAGT 58.009 50.000 16.92 9.47 0.00 4.18
34 35 2.159226 GGATGTTACCTGGTCTGACGAG 60.159 54.545 12.29 12.29 0.00 4.18
35 36 1.822990 GGATGTTACCTGGTCTGACGA 59.177 52.381 0.63 0.00 0.00 4.20
36 37 1.825474 AGGATGTTACCTGGTCTGACG 59.175 52.381 0.63 0.00 39.01 4.35
45 46 1.349688 TCGGTTTGCAGGATGTTACCT 59.650 47.619 0.00 0.00 41.43 3.08
46 47 1.816074 TCGGTTTGCAGGATGTTACC 58.184 50.000 0.00 0.00 39.31 2.85
47 48 2.747446 ACATCGGTTTGCAGGATGTTAC 59.253 45.455 14.93 0.00 46.23 2.50
48 49 3.066291 ACATCGGTTTGCAGGATGTTA 57.934 42.857 14.93 0.00 46.23 2.41
49 50 1.909700 ACATCGGTTTGCAGGATGTT 58.090 45.000 14.93 4.70 46.23 2.71
50 51 3.650647 ACATCGGTTTGCAGGATGT 57.349 47.368 14.93 14.93 44.27 3.06
51 52 2.086869 AGAACATCGGTTTGCAGGATG 58.913 47.619 13.97 13.97 42.45 3.51
52 53 2.086869 CAGAACATCGGTTTGCAGGAT 58.913 47.619 0.00 0.00 37.36 3.24
53 54 1.522668 CAGAACATCGGTTTGCAGGA 58.477 50.000 0.00 0.00 37.36 3.86
54 55 0.523072 CCAGAACATCGGTTTGCAGG 59.477 55.000 0.00 0.00 37.36 4.85
55 56 1.197721 GACCAGAACATCGGTTTGCAG 59.802 52.381 0.00 0.00 37.36 4.41
56 57 1.234821 GACCAGAACATCGGTTTGCA 58.765 50.000 0.00 0.00 37.36 4.08
57 58 0.165944 CGACCAGAACATCGGTTTGC 59.834 55.000 0.00 0.00 37.36 3.68
58 59 1.726791 CTCGACCAGAACATCGGTTTG 59.273 52.381 0.00 0.00 37.36 2.93
59 60 1.337823 CCTCGACCAGAACATCGGTTT 60.338 52.381 0.00 0.00 37.36 3.27
60 61 0.246635 CCTCGACCAGAACATCGGTT 59.753 55.000 0.00 0.00 40.76 4.44
61 62 1.890894 CCTCGACCAGAACATCGGT 59.109 57.895 0.00 0.00 38.86 4.69
62 63 1.519455 GCCTCGACCAGAACATCGG 60.519 63.158 0.00 0.00 38.86 4.18
63 64 1.519455 GGCCTCGACCAGAACATCG 60.519 63.158 0.00 0.00 39.72 3.84
64 65 1.153349 GGGCCTCGACCAGAACATC 60.153 63.158 0.84 0.00 0.00 3.06
65 66 2.990479 GGGCCTCGACCAGAACAT 59.010 61.111 0.84 0.00 0.00 2.71
66 67 3.691342 CGGGCCTCGACCAGAACA 61.691 66.667 0.84 0.00 42.43 3.18
67 68 4.452733 CCGGGCCTCGACCAGAAC 62.453 72.222 14.30 0.00 42.43 3.01
99 100 3.680786 TCGTGGACACCTCGCTGG 61.681 66.667 7.27 0.00 39.87 4.85
100 101 2.430921 GTCGTGGACACCTCGCTG 60.431 66.667 7.27 0.00 39.87 5.18
101 102 4.039357 CGTCGTGGACACCTCGCT 62.039 66.667 7.27 0.00 39.87 4.93
102 103 3.836176 AACGTCGTGGACACCTCGC 62.836 63.158 0.00 3.11 39.87 5.03
103 104 2.014554 CAACGTCGTGGACACCTCG 61.015 63.158 0.00 6.00 41.16 4.63
104 105 0.311790 TACAACGTCGTGGACACCTC 59.688 55.000 6.80 0.00 32.09 3.85
105 106 0.313043 CTACAACGTCGTGGACACCT 59.687 55.000 6.80 0.00 32.09 4.00
106 107 0.665369 CCTACAACGTCGTGGACACC 60.665 60.000 6.80 0.00 32.09 4.16
107 108 1.280206 GCCTACAACGTCGTGGACAC 61.280 60.000 6.80 0.00 32.09 3.67
108 109 1.007038 GCCTACAACGTCGTGGACA 60.007 57.895 6.80 0.00 32.09 4.02
109 110 2.084681 CGCCTACAACGTCGTGGAC 61.085 63.158 6.80 0.00 0.00 4.02
110 111 2.256158 CGCCTACAACGTCGTGGA 59.744 61.111 6.80 0.00 0.00 4.02
111 112 3.475774 GCGCCTACAACGTCGTGG 61.476 66.667 0.00 0.00 0.00 4.94
112 113 2.092291 ATGCGCCTACAACGTCGTG 61.092 57.895 4.18 0.00 0.00 4.35
113 114 2.092291 CATGCGCCTACAACGTCGT 61.092 57.895 4.18 0.00 0.00 4.34
114 115 2.695055 CATGCGCCTACAACGTCG 59.305 61.111 4.18 0.00 0.00 5.12
115 116 3.089784 CCATGCGCCTACAACGTC 58.910 61.111 4.18 0.00 0.00 4.34
116 117 3.124921 GCCATGCGCCTACAACGT 61.125 61.111 4.18 0.00 0.00 3.99
117 118 2.813179 GAGCCATGCGCCTACAACG 61.813 63.158 4.18 0.00 38.78 4.10
118 119 2.472909 GGAGCCATGCGCCTACAAC 61.473 63.158 4.18 0.00 44.91 3.32
119 120 2.124736 GGAGCCATGCGCCTACAA 60.125 61.111 4.18 0.00 44.91 2.41
125 126 2.659897 CTACGAGGAGCCATGCGC 60.660 66.667 0.00 0.00 37.98 6.09
126 127 1.141881 AACTACGAGGAGCCATGCG 59.858 57.895 0.00 0.00 0.00 4.73
127 128 0.108138 ACAACTACGAGGAGCCATGC 60.108 55.000 0.00 0.00 0.00 4.06
128 129 1.645034 CACAACTACGAGGAGCCATG 58.355 55.000 0.00 0.00 0.00 3.66
129 130 0.108138 GCACAACTACGAGGAGCCAT 60.108 55.000 0.00 0.00 0.00 4.40
130 131 1.185618 AGCACAACTACGAGGAGCCA 61.186 55.000 0.00 0.00 0.00 4.75
131 132 0.458716 GAGCACAACTACGAGGAGCC 60.459 60.000 0.00 0.00 0.00 4.70
132 133 0.798771 CGAGCACAACTACGAGGAGC 60.799 60.000 0.00 0.00 0.00 4.70
133 134 0.179161 CCGAGCACAACTACGAGGAG 60.179 60.000 0.00 0.00 0.00 3.69
134 135 1.880894 CCGAGCACAACTACGAGGA 59.119 57.895 0.00 0.00 0.00 3.71
135 136 1.805945 GCCGAGCACAACTACGAGG 60.806 63.158 0.00 0.00 0.00 4.63
136 137 0.458543 ATGCCGAGCACAACTACGAG 60.459 55.000 0.50 0.00 43.04 4.18
137 138 0.457853 GATGCCGAGCACAACTACGA 60.458 55.000 0.50 0.00 43.04 3.43
138 139 0.735978 TGATGCCGAGCACAACTACG 60.736 55.000 0.50 0.00 43.04 3.51
139 140 0.721718 GTGATGCCGAGCACAACTAC 59.278 55.000 0.50 0.00 43.04 2.73
140 141 0.320050 TGTGATGCCGAGCACAACTA 59.680 50.000 0.50 0.00 45.37 2.24
141 142 1.071299 TGTGATGCCGAGCACAACT 59.929 52.632 0.50 0.00 45.37 3.16
142 143 3.654201 TGTGATGCCGAGCACAAC 58.346 55.556 0.50 3.89 45.37 3.32
144 145 1.965930 GGTTGTGATGCCGAGCACA 60.966 57.895 0.50 0.00 46.64 4.57
145 146 2.870372 GGTTGTGATGCCGAGCAC 59.130 61.111 0.50 0.00 43.04 4.40
162 163 3.948086 GAGTGCGACTCCGTCCACG 62.948 68.421 5.33 0.00 39.28 4.94
163 164 2.126424 GAGTGCGACTCCGTCCAC 60.126 66.667 5.33 7.21 39.28 4.02
164 165 3.733960 CGAGTGCGACTCCGTCCA 61.734 66.667 9.71 0.00 42.12 4.02
165 166 3.664223 GACGAGTGCGACTCCGTCC 62.664 68.421 18.55 9.58 42.12 4.79
166 167 2.202324 GACGAGTGCGACTCCGTC 60.202 66.667 16.58 16.58 42.12 4.79
167 168 3.735029 GGACGAGTGCGACTCCGT 61.735 66.667 9.71 10.29 42.12 4.69
168 169 3.733960 TGGACGAGTGCGACTCCG 61.734 66.667 9.71 7.98 42.12 4.63
169 170 2.126424 GTGGACGAGTGCGACTCC 60.126 66.667 9.71 0.00 42.12 3.85
170 171 2.126424 GGTGGACGAGTGCGACTC 60.126 66.667 0.00 6.31 41.71 3.36
171 172 2.910479 TGGTGGACGAGTGCGACT 60.910 61.111 0.00 0.00 41.64 4.18
172 173 2.733593 GTGGTGGACGAGTGCGAC 60.734 66.667 0.00 0.00 41.64 5.19
173 174 3.986006 GGTGGTGGACGAGTGCGA 61.986 66.667 0.00 0.00 41.64 5.10
174 175 2.989055 AAAGGTGGTGGACGAGTGCG 62.989 60.000 0.00 0.00 44.79 5.34
175 176 0.034337 TAAAGGTGGTGGACGAGTGC 59.966 55.000 0.00 0.00 0.00 4.40
176 177 2.536761 TTAAAGGTGGTGGACGAGTG 57.463 50.000 0.00 0.00 0.00 3.51
177 178 3.564053 TTTTAAAGGTGGTGGACGAGT 57.436 42.857 0.00 0.00 0.00 4.18
178 179 4.794169 CATTTTTAAAGGTGGTGGACGAG 58.206 43.478 0.00 0.00 0.00 4.18
179 180 3.004944 GCATTTTTAAAGGTGGTGGACGA 59.995 43.478 0.00 0.00 0.00 4.20
180 181 3.243569 TGCATTTTTAAAGGTGGTGGACG 60.244 43.478 0.00 0.00 0.00 4.79
181 182 4.306600 CTGCATTTTTAAAGGTGGTGGAC 58.693 43.478 0.00 0.00 0.00 4.02
182 183 3.323403 CCTGCATTTTTAAAGGTGGTGGA 59.677 43.478 0.00 0.00 0.00 4.02
183 184 3.323403 TCCTGCATTTTTAAAGGTGGTGG 59.677 43.478 0.00 0.00 0.00 4.61
184 185 4.599047 TCCTGCATTTTTAAAGGTGGTG 57.401 40.909 0.00 0.00 0.00 4.17
185 186 5.823861 ATTCCTGCATTTTTAAAGGTGGT 57.176 34.783 0.00 0.00 0.00 4.16
186 187 7.610865 TCTTATTCCTGCATTTTTAAAGGTGG 58.389 34.615 0.00 0.00 0.00 4.61
187 188 9.487790 TTTCTTATTCCTGCATTTTTAAAGGTG 57.512 29.630 0.00 0.00 0.00 4.00
199 200 9.859427 CAATCTTATGTTTTTCTTATTCCTGCA 57.141 29.630 0.00 0.00 0.00 4.41
218 219 9.452287 TGAGATGAACATGACATTTCAATCTTA 57.548 29.630 19.36 10.01 36.45 2.10
219 220 8.344446 TGAGATGAACATGACATTTCAATCTT 57.656 30.769 19.36 0.19 36.45 2.40
220 221 7.933215 TGAGATGAACATGACATTTCAATCT 57.067 32.000 19.36 13.53 36.45 2.40
223 224 7.395206 AGGATTGAGATGAACATGACATTTCAA 59.605 33.333 26.76 26.76 45.60 2.69
224 225 6.888088 AGGATTGAGATGAACATGACATTTCA 59.112 34.615 18.47 18.47 37.19 2.69
225 226 7.330900 AGGATTGAGATGAACATGACATTTC 57.669 36.000 0.00 9.94 32.11 2.17
226 227 7.830697 TGTAGGATTGAGATGAACATGACATTT 59.169 33.333 0.00 0.00 0.00 2.32
227 228 7.341030 TGTAGGATTGAGATGAACATGACATT 58.659 34.615 0.00 0.00 0.00 2.71
228 229 6.892485 TGTAGGATTGAGATGAACATGACAT 58.108 36.000 0.00 4.71 0.00 3.06
229 230 6.298441 TGTAGGATTGAGATGAACATGACA 57.702 37.500 0.00 0.00 0.00 3.58
230 231 6.820656 ACTTGTAGGATTGAGATGAACATGAC 59.179 38.462 0.00 0.00 0.00 3.06
231 232 6.950842 ACTTGTAGGATTGAGATGAACATGA 58.049 36.000 0.00 0.00 0.00 3.07
232 233 7.621428 AACTTGTAGGATTGAGATGAACATG 57.379 36.000 0.00 0.00 0.00 3.21
233 234 8.517878 CAAAACTTGTAGGATTGAGATGAACAT 58.482 33.333 0.00 0.00 0.00 2.71
234 235 7.040478 CCAAAACTTGTAGGATTGAGATGAACA 60.040 37.037 0.00 0.00 0.00 3.18
235 236 7.308435 CCAAAACTTGTAGGATTGAGATGAAC 58.692 38.462 0.00 0.00 0.00 3.18
236 237 6.434028 CCCAAAACTTGTAGGATTGAGATGAA 59.566 38.462 0.00 0.00 0.00 2.57
237 238 5.945784 CCCAAAACTTGTAGGATTGAGATGA 59.054 40.000 0.00 0.00 0.00 2.92
238 239 5.711976 ACCCAAAACTTGTAGGATTGAGATG 59.288 40.000 0.00 0.00 0.00 2.90
239 240 5.892348 ACCCAAAACTTGTAGGATTGAGAT 58.108 37.500 0.00 0.00 0.00 2.75
240 241 5.319043 ACCCAAAACTTGTAGGATTGAGA 57.681 39.130 0.00 0.00 0.00 3.27
241 242 5.301805 ACAACCCAAAACTTGTAGGATTGAG 59.698 40.000 0.00 0.00 0.00 3.02
242 243 5.205056 ACAACCCAAAACTTGTAGGATTGA 58.795 37.500 0.00 0.00 0.00 2.57
243 244 5.529581 ACAACCCAAAACTTGTAGGATTG 57.470 39.130 0.00 0.00 0.00 2.67
244 245 6.155393 TCAAACAACCCAAAACTTGTAGGATT 59.845 34.615 0.00 0.00 30.26 3.01
245 246 5.659079 TCAAACAACCCAAAACTTGTAGGAT 59.341 36.000 0.00 0.00 30.26 3.24
246 247 5.017490 TCAAACAACCCAAAACTTGTAGGA 58.983 37.500 0.00 0.00 30.26 2.94
247 248 5.331876 TCAAACAACCCAAAACTTGTAGG 57.668 39.130 0.00 0.00 30.26 3.18
248 249 6.238076 GCAATCAAACAACCCAAAACTTGTAG 60.238 38.462 0.00 0.00 30.26 2.74
249 250 5.582665 GCAATCAAACAACCCAAAACTTGTA 59.417 36.000 0.00 0.00 30.26 2.41
250 251 4.394610 GCAATCAAACAACCCAAAACTTGT 59.605 37.500 0.00 0.00 31.76 3.16
251 252 4.394300 TGCAATCAAACAACCCAAAACTTG 59.606 37.500 0.00 0.00 0.00 3.16
252 253 4.583871 TGCAATCAAACAACCCAAAACTT 58.416 34.783 0.00 0.00 0.00 2.66
253 254 4.213564 TGCAATCAAACAACCCAAAACT 57.786 36.364 0.00 0.00 0.00 2.66
254 255 5.094429 GATGCAATCAAACAACCCAAAAC 57.906 39.130 0.00 0.00 44.70 2.43
290 291 8.579863 CCACTCAAACCTCTTTGAAAGAATTAT 58.420 33.333 9.15 0.00 44.18 1.28
291 292 7.777910 TCCACTCAAACCTCTTTGAAAGAATTA 59.222 33.333 9.15 0.00 44.18 1.40
292 293 6.607198 TCCACTCAAACCTCTTTGAAAGAATT 59.393 34.615 9.15 3.94 44.18 2.17
293 294 6.129179 TCCACTCAAACCTCTTTGAAAGAAT 58.871 36.000 9.15 0.00 44.18 2.40
294 295 5.505780 TCCACTCAAACCTCTTTGAAAGAA 58.494 37.500 9.15 0.00 44.18 2.52
295 296 5.110814 TCCACTCAAACCTCTTTGAAAGA 57.889 39.130 7.49 7.49 44.18 2.52
296 297 5.766222 CATCCACTCAAACCTCTTTGAAAG 58.234 41.667 0.00 0.00 44.18 2.62
297 298 4.037923 GCATCCACTCAAACCTCTTTGAAA 59.962 41.667 0.00 0.00 44.18 2.69
298 299 3.569701 GCATCCACTCAAACCTCTTTGAA 59.430 43.478 0.00 0.00 44.18 2.69
299 300 3.149196 GCATCCACTCAAACCTCTTTGA 58.851 45.455 0.00 0.00 42.93 2.69
300 301 3.152341 AGCATCCACTCAAACCTCTTTG 58.848 45.455 0.00 0.00 38.56 2.77
301 302 3.515602 AGCATCCACTCAAACCTCTTT 57.484 42.857 0.00 0.00 0.00 2.52
302 303 3.840666 TCTAGCATCCACTCAAACCTCTT 59.159 43.478 0.00 0.00 0.00 2.85
303 304 3.445008 TCTAGCATCCACTCAAACCTCT 58.555 45.455 0.00 0.00 0.00 3.69
304 305 3.895232 TCTAGCATCCACTCAAACCTC 57.105 47.619 0.00 0.00 0.00 3.85
305 306 4.640771 TTTCTAGCATCCACTCAAACCT 57.359 40.909 0.00 0.00 0.00 3.50
306 307 5.649831 AGAATTTCTAGCATCCACTCAAACC 59.350 40.000 0.00 0.00 0.00 3.27
307 308 6.749923 AGAATTTCTAGCATCCACTCAAAC 57.250 37.500 0.00 0.00 0.00 2.93
308 309 8.267183 TCATAGAATTTCTAGCATCCACTCAAA 58.733 33.333 11.56 0.00 31.67 2.69
309 310 7.795047 TCATAGAATTTCTAGCATCCACTCAA 58.205 34.615 11.56 0.00 31.67 3.02
310 311 7.365497 TCATAGAATTTCTAGCATCCACTCA 57.635 36.000 11.56 0.00 31.67 3.41
311 312 7.712639 TGTTCATAGAATTTCTAGCATCCACTC 59.287 37.037 11.56 0.00 31.67 3.51
312 313 7.568349 TGTTCATAGAATTTCTAGCATCCACT 58.432 34.615 11.56 0.00 31.67 4.00
313 314 7.792374 TGTTCATAGAATTTCTAGCATCCAC 57.208 36.000 11.56 4.06 31.67 4.02
314 315 9.716531 CTATGTTCATAGAATTTCTAGCATCCA 57.283 33.333 12.82 5.52 31.67 3.41
315 316 9.717942 ACTATGTTCATAGAATTTCTAGCATCC 57.282 33.333 21.78 0.74 31.67 3.51
425 426 9.546428 CACTTTACAAGGAATTTTTGAAGGATT 57.454 29.630 9.74 0.00 0.00 3.01
426 427 8.150296 CCACTTTACAAGGAATTTTTGAAGGAT 58.850 33.333 9.74 0.00 0.00 3.24
427 428 7.418483 CCCACTTTACAAGGAATTTTTGAAGGA 60.418 37.037 9.74 0.00 0.00 3.36
428 429 6.705825 CCCACTTTACAAGGAATTTTTGAAGG 59.294 38.462 9.74 4.62 0.00 3.46
429 430 6.705825 CCCCACTTTACAAGGAATTTTTGAAG 59.294 38.462 9.74 6.93 0.00 3.02
430 431 6.587273 CCCCACTTTACAAGGAATTTTTGAA 58.413 36.000 9.74 0.21 0.00 2.69
431 432 5.454045 GCCCCACTTTACAAGGAATTTTTGA 60.454 40.000 9.74 0.00 0.00 2.69
432 433 4.754618 GCCCCACTTTACAAGGAATTTTTG 59.245 41.667 3.01 3.01 0.00 2.44
433 434 4.410555 TGCCCCACTTTACAAGGAATTTTT 59.589 37.500 0.00 0.00 0.00 1.94
434 435 3.970640 TGCCCCACTTTACAAGGAATTTT 59.029 39.130 0.00 0.00 0.00 1.82
435 436 3.582164 TGCCCCACTTTACAAGGAATTT 58.418 40.909 0.00 0.00 0.00 1.82
436 437 3.252554 TGCCCCACTTTACAAGGAATT 57.747 42.857 0.00 0.00 0.00 2.17
437 438 2.990740 TGCCCCACTTTACAAGGAAT 57.009 45.000 0.00 0.00 0.00 3.01
438 439 2.757894 TTGCCCCACTTTACAAGGAA 57.242 45.000 0.00 0.00 0.00 3.36
439 440 2.757894 TTTGCCCCACTTTACAAGGA 57.242 45.000 0.00 0.00 0.00 3.36
440 441 2.896685 TGATTTGCCCCACTTTACAAGG 59.103 45.455 0.00 0.00 0.00 3.61
441 442 4.463891 AGATGATTTGCCCCACTTTACAAG 59.536 41.667 0.00 0.00 0.00 3.16
442 443 4.415596 AGATGATTTGCCCCACTTTACAA 58.584 39.130 0.00 0.00 0.00 2.41
443 444 4.046286 AGATGATTTGCCCCACTTTACA 57.954 40.909 0.00 0.00 0.00 2.41
444 445 6.239036 GGATTAGATGATTTGCCCCACTTTAC 60.239 42.308 0.00 0.00 0.00 2.01
445 446 5.833131 GGATTAGATGATTTGCCCCACTTTA 59.167 40.000 0.00 0.00 0.00 1.85
446 447 4.651045 GGATTAGATGATTTGCCCCACTTT 59.349 41.667 0.00 0.00 0.00 2.66
447 448 4.218312 GGATTAGATGATTTGCCCCACTT 58.782 43.478 0.00 0.00 0.00 3.16
448 449 3.437052 GGGATTAGATGATTTGCCCCACT 60.437 47.826 0.00 0.00 32.98 4.00
449 450 2.893489 GGGATTAGATGATTTGCCCCAC 59.107 50.000 0.00 0.00 32.98 4.61
450 451 3.243359 GGGATTAGATGATTTGCCCCA 57.757 47.619 0.00 0.00 32.98 4.96
451 452 2.529632 GGGGATTAGATGATTTGCCCC 58.470 52.381 0.00 0.00 46.15 5.80
452 453 2.529632 GGGGGATTAGATGATTTGCCC 58.470 52.381 0.00 0.00 38.91 5.36
473 474 1.224592 GGGTAGGTGTGCCAGGATG 59.775 63.158 0.00 0.00 37.19 3.51
474 475 1.229820 TGGGTAGGTGTGCCAGGAT 60.230 57.895 0.00 0.00 37.19 3.24
475 476 2.205749 TGGGTAGGTGTGCCAGGA 59.794 61.111 0.00 0.00 37.19 3.86
476 477 2.224159 AGTGGGTAGGTGTGCCAGG 61.224 63.158 0.00 0.00 37.19 4.45
477 478 1.003355 CAGTGGGTAGGTGTGCCAG 60.003 63.158 0.00 0.00 37.19 4.85
478 479 0.472161 TACAGTGGGTAGGTGTGCCA 60.472 55.000 0.00 0.00 37.19 4.92
479 480 0.249398 CTACAGTGGGTAGGTGTGCC 59.751 60.000 0.00 0.00 44.77 5.01
480 481 3.834732 CTACAGTGGGTAGGTGTGC 57.165 57.895 0.00 0.00 44.77 4.57
487 488 4.295141 CCCAAAATCACTACAGTGGGTA 57.705 45.455 9.41 0.00 45.65 3.69
488 489 3.154827 CCCAAAATCACTACAGTGGGT 57.845 47.619 9.41 0.00 45.65 4.51
490 491 2.228822 GCACCCAAAATCACTACAGTGG 59.771 50.000 9.41 0.00 45.65 4.00
491 492 2.884012 TGCACCCAAAATCACTACAGTG 59.116 45.455 2.84 2.84 46.91 3.66
492 493 3.222173 TGCACCCAAAATCACTACAGT 57.778 42.857 0.00 0.00 0.00 3.55
493 494 3.129287 GGATGCACCCAAAATCACTACAG 59.871 47.826 0.00 0.00 0.00 2.74
494 495 3.088532 GGATGCACCCAAAATCACTACA 58.911 45.455 0.00 0.00 0.00 2.74
495 496 2.097466 CGGATGCACCCAAAATCACTAC 59.903 50.000 0.00 0.00 34.64 2.73
496 497 2.026729 TCGGATGCACCCAAAATCACTA 60.027 45.455 0.00 0.00 34.64 2.74
497 498 1.176527 CGGATGCACCCAAAATCACT 58.823 50.000 0.00 0.00 34.64 3.41
498 499 1.173043 TCGGATGCACCCAAAATCAC 58.827 50.000 0.00 0.00 34.64 3.06
499 500 1.543802 GTTCGGATGCACCCAAAATCA 59.456 47.619 0.00 0.00 34.64 2.57
500 501 1.135112 GGTTCGGATGCACCCAAAATC 60.135 52.381 0.00 0.00 34.64 2.17
501 502 0.894835 GGTTCGGATGCACCCAAAAT 59.105 50.000 0.00 0.00 34.64 1.82
502 503 0.468214 TGGTTCGGATGCACCCAAAA 60.468 50.000 0.00 0.00 29.21 2.44
503 504 0.893270 CTGGTTCGGATGCACCCAAA 60.893 55.000 0.00 0.00 29.21 3.28
504 505 1.303236 CTGGTTCGGATGCACCCAA 60.303 57.895 0.00 0.00 29.21 4.12
505 506 2.184020 CTCTGGTTCGGATGCACCCA 62.184 60.000 0.00 0.00 29.21 4.51
506 507 1.450312 CTCTGGTTCGGATGCACCC 60.450 63.158 0.00 0.00 29.21 4.61
507 508 2.109126 GCTCTGGTTCGGATGCACC 61.109 63.158 0.00 0.00 31.27 5.01
508 509 1.375908 TGCTCTGGTTCGGATGCAC 60.376 57.895 0.00 0.00 0.00 4.57
509 510 1.375908 GTGCTCTGGTTCGGATGCA 60.376 57.895 0.00 0.00 0.00 3.96
510 511 2.109126 GGTGCTCTGGTTCGGATGC 61.109 63.158 0.00 0.00 0.00 3.91
511 512 1.811266 CGGTGCTCTGGTTCGGATG 60.811 63.158 0.00 0.00 0.00 3.51
512 513 1.949847 CTCGGTGCTCTGGTTCGGAT 61.950 60.000 0.00 0.00 0.00 4.18
513 514 2.599281 TCGGTGCTCTGGTTCGGA 60.599 61.111 0.00 0.00 0.00 4.55
514 515 2.125912 CTCGGTGCTCTGGTTCGG 60.126 66.667 0.00 0.00 0.00 4.30
515 516 1.444553 GACTCGGTGCTCTGGTTCG 60.445 63.158 0.00 0.00 0.00 3.95
516 517 1.444553 CGACTCGGTGCTCTGGTTC 60.445 63.158 0.00 0.00 0.00 3.62
517 518 2.651361 CGACTCGGTGCTCTGGTT 59.349 61.111 0.00 0.00 0.00 3.67
518 519 4.057428 GCGACTCGGTGCTCTGGT 62.057 66.667 0.00 0.00 0.00 4.00
519 520 4.803426 GGCGACTCGGTGCTCTGG 62.803 72.222 0.00 0.00 0.00 3.86
520 521 4.803426 GGGCGACTCGGTGCTCTG 62.803 72.222 0.00 0.00 0.00 3.35
525 526 3.432051 GAGATGGGGCGACTCGGTG 62.432 68.421 0.00 0.00 0.00 4.94
526 527 3.148279 GAGATGGGGCGACTCGGT 61.148 66.667 0.00 0.00 0.00 4.69
527 528 3.917760 GGAGATGGGGCGACTCGG 61.918 72.222 0.00 0.00 0.00 4.63
528 529 2.835431 AGGAGATGGGGCGACTCG 60.835 66.667 0.00 0.00 0.00 4.18
529 530 2.801631 CCAGGAGATGGGGCGACTC 61.802 68.421 0.00 0.00 46.36 3.36
530 531 2.765807 CCAGGAGATGGGGCGACT 60.766 66.667 0.00 0.00 46.36 4.18
547 548 2.421424 GGGAGTCATGCAGTGAAATCAC 59.579 50.000 5.40 5.40 46.77 3.06
548 549 2.306805 AGGGAGTCATGCAGTGAAATCA 59.693 45.455 0.00 0.00 38.90 2.57
549 550 2.996631 AGGGAGTCATGCAGTGAAATC 58.003 47.619 0.00 0.00 38.90 2.17
550 551 3.350833 GAAGGGAGTCATGCAGTGAAAT 58.649 45.455 0.00 0.00 38.90 2.17
551 552 2.783135 GAAGGGAGTCATGCAGTGAAA 58.217 47.619 0.00 0.00 38.90 2.69
552 553 1.338105 CGAAGGGAGTCATGCAGTGAA 60.338 52.381 0.00 0.00 38.90 3.18
553 554 0.247460 CGAAGGGAGTCATGCAGTGA 59.753 55.000 0.00 0.00 0.00 3.41
554 555 0.247460 TCGAAGGGAGTCATGCAGTG 59.753 55.000 0.00 0.00 0.00 3.66
555 556 1.198713 ATCGAAGGGAGTCATGCAGT 58.801 50.000 0.00 0.00 0.00 4.40
556 557 3.583806 GATATCGAAGGGAGTCATGCAG 58.416 50.000 0.00 0.00 0.00 4.41
557 558 2.029918 CGATATCGAAGGGAGTCATGCA 60.030 50.000 20.50 0.00 43.02 3.96
558 559 2.029828 ACGATATCGAAGGGAGTCATGC 60.030 50.000 30.75 0.00 43.02 4.06
559 560 3.924918 ACGATATCGAAGGGAGTCATG 57.075 47.619 30.75 0.00 43.02 3.07
560 561 6.390721 CAAATACGATATCGAAGGGAGTCAT 58.609 40.000 30.75 7.41 43.02 3.06
561 562 5.769367 CAAATACGATATCGAAGGGAGTCA 58.231 41.667 30.75 5.14 43.02 3.41
562 563 4.621886 GCAAATACGATATCGAAGGGAGTC 59.378 45.833 30.75 9.17 43.02 3.36
563 564 4.281182 AGCAAATACGATATCGAAGGGAGT 59.719 41.667 30.75 9.61 43.02 3.85
564 565 4.810790 AGCAAATACGATATCGAAGGGAG 58.189 43.478 30.75 15.76 43.02 4.30
565 566 4.866508 AGCAAATACGATATCGAAGGGA 57.133 40.909 30.75 10.81 43.02 4.20
566 567 9.395707 GTATATAGCAAATACGATATCGAAGGG 57.604 37.037 30.75 15.95 43.02 3.95
575 576 9.856488 CAACCACTAGTATATAGCAAATACGAT 57.144 33.333 0.00 0.00 35.42 3.73
576 577 8.301720 CCAACCACTAGTATATAGCAAATACGA 58.698 37.037 0.00 0.00 35.42 3.43
577 578 8.301720 TCCAACCACTAGTATATAGCAAATACG 58.698 37.037 0.00 0.00 35.42 3.06
578 579 9.420551 GTCCAACCACTAGTATATAGCAAATAC 57.579 37.037 0.00 0.00 0.00 1.89
579 580 8.301720 CGTCCAACCACTAGTATATAGCAAATA 58.698 37.037 0.00 0.00 0.00 1.40
580 581 7.152645 CGTCCAACCACTAGTATATAGCAAAT 58.847 38.462 0.00 0.00 0.00 2.32
581 582 6.509656 CGTCCAACCACTAGTATATAGCAAA 58.490 40.000 0.00 0.00 0.00 3.68
582 583 5.508489 GCGTCCAACCACTAGTATATAGCAA 60.508 44.000 0.00 0.00 0.00 3.91
583 584 4.022589 GCGTCCAACCACTAGTATATAGCA 60.023 45.833 0.00 0.00 0.00 3.49
584 585 4.483311 GCGTCCAACCACTAGTATATAGC 58.517 47.826 0.00 0.00 0.00 2.97
616 617 2.166664 ACACCTTCCTCTCAAGCGATAC 59.833 50.000 0.00 0.00 0.00 2.24
617 618 2.166459 CACACCTTCCTCTCAAGCGATA 59.834 50.000 0.00 0.00 0.00 2.92
634 635 0.041312 ATGAAGAAACGCGCACACAC 60.041 50.000 5.73 0.00 0.00 3.82
671 674 9.759473 TTCTTCTAATTTTGAGATGAAGGGAAT 57.241 29.630 0.00 0.00 34.14 3.01
986 1008 3.132467 GGTAACCATGGTGACTAGAGTCC 59.868 52.174 28.30 9.43 44.15 3.85
1027 1049 0.607217 TGAACCTCCTCGTCGTAGCA 60.607 55.000 0.00 0.00 0.00 3.49
1029 1051 1.130749 CTGTGAACCTCCTCGTCGTAG 59.869 57.143 0.00 0.00 0.00 3.51
1084 1106 1.154016 CGTCGGAATCGCTGTCTGT 60.154 57.895 0.00 0.00 36.13 3.41
1178 1200 2.763902 GCCACAGGCCCCTTACTT 59.236 61.111 0.00 0.00 44.06 2.24
1269 1291 1.511305 GAAGACATGAGGCGACCGA 59.489 57.895 0.00 0.00 0.00 4.69
1332 1354 1.280133 TCCTCTGAGATTTGGTGGCTG 59.720 52.381 6.17 0.00 0.00 4.85
1359 1381 4.728772 TCCTCTGAGATTTGCCTCAAAAA 58.271 39.130 6.17 0.00 42.05 1.94
1360 1382 4.371624 TCCTCTGAGATTTGCCTCAAAA 57.628 40.909 6.17 0.00 42.05 2.44
1361 1383 4.371624 TTCCTCTGAGATTTGCCTCAAA 57.628 40.909 6.17 0.00 42.05 2.69
1362 1384 4.371624 TTTCCTCTGAGATTTGCCTCAA 57.628 40.909 6.17 0.00 42.05 3.02
1363 1385 4.581309 ATTTCCTCTGAGATTTGCCTCA 57.419 40.909 6.17 0.00 40.57 3.86
1364 1386 5.911378 AAATTTCCTCTGAGATTTGCCTC 57.089 39.130 6.17 0.00 34.87 4.70
1365 1387 5.890419 CCTAAATTTCCTCTGAGATTTGCCT 59.110 40.000 6.17 0.00 36.35 4.75
1366 1388 5.654209 ACCTAAATTTCCTCTGAGATTTGCC 59.346 40.000 6.17 0.00 36.35 4.52
1367 1389 6.601217 AGACCTAAATTTCCTCTGAGATTTGC 59.399 38.462 6.17 0.00 36.35 3.68
1368 1390 9.323985 CTAGACCTAAATTTCCTCTGAGATTTG 57.676 37.037 6.17 0.00 36.35 2.32
1369 1391 7.990314 GCTAGACCTAAATTTCCTCTGAGATTT 59.010 37.037 6.17 7.09 38.45 2.17
1370 1392 7.346960 AGCTAGACCTAAATTTCCTCTGAGATT 59.653 37.037 6.17 0.00 0.00 2.40
1371 1393 6.843861 AGCTAGACCTAAATTTCCTCTGAGAT 59.156 38.462 6.17 0.00 0.00 2.75
1372 1394 6.198639 AGCTAGACCTAAATTTCCTCTGAGA 58.801 40.000 6.17 0.00 0.00 3.27
1373 1395 6.478512 AGCTAGACCTAAATTTCCTCTGAG 57.521 41.667 0.00 0.00 0.00 3.35
1374 1396 6.644347 CAAGCTAGACCTAAATTTCCTCTGA 58.356 40.000 0.00 0.00 0.00 3.27
1375 1397 5.295540 GCAAGCTAGACCTAAATTTCCTCTG 59.704 44.000 0.00 0.00 0.00 3.35
1376 1398 5.190726 AGCAAGCTAGACCTAAATTTCCTCT 59.809 40.000 0.00 0.00 0.00 3.69
1377 1399 5.432645 AGCAAGCTAGACCTAAATTTCCTC 58.567 41.667 0.00 0.00 0.00 3.71
1378 1400 5.443230 AGCAAGCTAGACCTAAATTTCCT 57.557 39.130 0.00 0.00 0.00 3.36
1379 1401 6.146347 CGATAGCAAGCTAGACCTAAATTTCC 59.854 42.308 7.91 0.00 31.45 3.13
1380 1402 7.111353 CGATAGCAAGCTAGACCTAAATTTC 57.889 40.000 7.91 0.00 31.45 2.17
1425 1447 8.671921 ACATCAACACTTTGAATCATCTCATAC 58.328 33.333 0.00 0.00 45.01 2.39
1426 1448 8.671028 CACATCAACACTTTGAATCATCTCATA 58.329 33.333 0.00 0.00 45.01 2.15
1447 1469 3.665745 AGAAACACAAATGGGCACATC 57.334 42.857 0.00 0.00 35.94 3.06
1487 1512 3.315191 AGTTACTTGGTTGTGTGCATCAC 59.685 43.478 11.13 11.13 46.31 3.06
1512 1537 4.301072 TCTGAAACAATCGAGGGGAAAT 57.699 40.909 0.00 0.00 0.00 2.17
1546 1571 5.296813 ACCGACTGATGAAAATGTAAAGC 57.703 39.130 0.00 0.00 0.00 3.51
1565 1736 8.795786 TGAAAGATTTCTCAACATTAAAACCG 57.204 30.769 6.84 0.00 38.02 4.44
1583 1754 7.047891 TGCCTAGTACATCGATTTTGAAAGAT 58.952 34.615 0.00 0.00 0.00 2.40
1595 1767 5.178252 CCAAATCTCATTGCCTAGTACATCG 59.822 44.000 0.00 0.00 0.00 3.84
1596 1768 6.017605 CACCAAATCTCATTGCCTAGTACATC 60.018 42.308 0.00 0.00 0.00 3.06
1650 1822 2.781681 TAGCTTCCCTAACAAGTGCC 57.218 50.000 0.00 0.00 0.00 5.01
1660 1832 1.271926 ACCAACGCAAATAGCTTCCCT 60.272 47.619 0.00 0.00 42.61 4.20
1681 1853 4.005650 CCAACACTAGCATCATCAACACT 58.994 43.478 0.00 0.00 0.00 3.55
1705 1877 2.526888 TCCTCGTTCATCCACCTAGT 57.473 50.000 0.00 0.00 0.00 2.57
1708 1880 1.866015 TCATCCTCGTTCATCCACCT 58.134 50.000 0.00 0.00 0.00 4.00
1755 1927 0.759346 AAAGCGGTTCTCTCCACAGT 59.241 50.000 0.00 0.00 0.00 3.55
1796 1968 3.470709 CATACCTCACCTGGCTTGTATG 58.529 50.000 10.08 10.08 32.38 2.39
1815 1987 8.107196 ACTATGGAGGAGAATAAAAGTTCCAT 57.893 34.615 8.06 8.06 43.99 3.41
1816 1988 7.510675 ACTATGGAGGAGAATAAAAGTTCCA 57.489 36.000 0.00 0.00 37.61 3.53
1854 2028 5.745514 CACTATCTGCATGCTTGATGTTAC 58.254 41.667 25.88 0.00 34.14 2.50
1911 2085 2.687935 ACTTGTGTAGTTGCCTTTGTGG 59.312 45.455 0.00 0.00 31.29 4.17
1913 2087 5.449999 GCTTTACTTGTGTAGTTGCCTTTGT 60.450 40.000 0.00 0.00 38.33 2.83
1914 2088 4.976116 GCTTTACTTGTGTAGTTGCCTTTG 59.024 41.667 0.00 0.00 38.33 2.77
1915 2089 4.642885 TGCTTTACTTGTGTAGTTGCCTTT 59.357 37.500 0.00 0.00 38.33 3.11
2197 2371 1.368641 GTGCATCGCCTGACATTACA 58.631 50.000 0.00 0.00 0.00 2.41
2389 2563 8.984764 TGATACACTGCGAAATAATTGGTATAC 58.015 33.333 0.00 0.00 0.00 1.47
2390 2564 9.719355 ATGATACACTGCGAAATAATTGGTATA 57.281 29.630 0.00 0.00 0.00 1.47
2396 2570 6.992123 TCTCCATGATACACTGCGAAATAATT 59.008 34.615 0.00 0.00 0.00 1.40
2404 2578 3.170791 ACTTCTCCATGATACACTGCG 57.829 47.619 0.00 0.00 0.00 5.18
2442 2616 7.293018 CCAAAGCAAACATTTAGCTGATTTTC 58.707 34.615 0.00 0.00 38.86 2.29
2444 2618 5.702209 CCCAAAGCAAACATTTAGCTGATTT 59.298 36.000 0.00 0.00 38.86 2.17
2462 2636 3.866910 GCATTGTATTCACATGCCCAAAG 59.133 43.478 0.00 0.00 35.20 2.77
2527 2703 8.659925 TGCAGAAAGAAAAATAAATCTTGCAA 57.340 26.923 0.00 0.00 35.27 4.08
2538 2715 9.186837 AGATCATATGACTGCAGAAAGAAAAAT 57.813 29.630 23.35 4.64 0.00 1.82
2548 2725 4.771577 AGGGAGTAGATCATATGACTGCAG 59.228 45.833 13.48 13.48 32.41 4.41
2565 2742 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2566 2743 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2567 2744 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2568 2745 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2569 2746 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2570 2747 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2571 2748 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2572 2749 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2573 2750 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
2574 2751 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
2575 2752 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
2576 2753 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
2584 2761 8.648693 ACCTTAGTATACAAAGTTGAGACACTT 58.351 33.333 5.50 0.00 38.74 3.16
2585 2762 8.088981 CACCTTAGTATACAAAGTTGAGACACT 58.911 37.037 5.50 0.00 0.00 3.55
2586 2763 7.331193 CCACCTTAGTATACAAAGTTGAGACAC 59.669 40.741 5.50 0.00 0.00 3.67
2587 2764 7.233962 TCCACCTTAGTATACAAAGTTGAGACA 59.766 37.037 5.50 0.00 0.00 3.41
2588 2765 7.609056 TCCACCTTAGTATACAAAGTTGAGAC 58.391 38.462 5.50 0.00 0.00 3.36
2589 2766 7.672660 TCTCCACCTTAGTATACAAAGTTGAGA 59.327 37.037 5.50 9.54 0.00 3.27
2590 2767 7.760340 GTCTCCACCTTAGTATACAAAGTTGAG 59.240 40.741 5.50 7.62 0.00 3.02
2591 2768 7.233962 TGTCTCCACCTTAGTATACAAAGTTGA 59.766 37.037 5.50 0.00 0.00 3.18
2592 2769 7.331193 GTGTCTCCACCTTAGTATACAAAGTTG 59.669 40.741 5.50 0.00 35.44 3.16
2593 2770 7.234988 AGTGTCTCCACCTTAGTATACAAAGTT 59.765 37.037 5.50 0.00 42.88 2.66
2594 2771 6.724905 AGTGTCTCCACCTTAGTATACAAAGT 59.275 38.462 5.50 0.00 42.88 2.66
2595 2772 7.171630 AGTGTCTCCACCTTAGTATACAAAG 57.828 40.000 5.50 0.00 42.88 2.77
2596 2773 7.549147 AAGTGTCTCCACCTTAGTATACAAA 57.451 36.000 5.50 0.00 42.88 2.83
2597 2774 8.834004 ATAAGTGTCTCCACCTTAGTATACAA 57.166 34.615 5.50 0.00 42.88 2.41
2598 2775 8.834004 AATAAGTGTCTCCACCTTAGTATACA 57.166 34.615 5.50 0.00 42.88 2.29
2601 2778 8.047310 CCAAAATAAGTGTCTCCACCTTAGTAT 58.953 37.037 0.00 0.00 42.88 2.12
2602 2779 7.391620 CCAAAATAAGTGTCTCCACCTTAGTA 58.608 38.462 0.00 0.00 42.88 1.82
2603 2780 6.238648 CCAAAATAAGTGTCTCCACCTTAGT 58.761 40.000 0.00 0.00 42.88 2.24
2604 2781 5.648092 CCCAAAATAAGTGTCTCCACCTTAG 59.352 44.000 0.00 0.00 42.88 2.18
2605 2782 5.311121 TCCCAAAATAAGTGTCTCCACCTTA 59.689 40.000 0.00 0.00 42.88 2.69
2606 2783 4.105697 TCCCAAAATAAGTGTCTCCACCTT 59.894 41.667 0.00 0.00 42.88 3.50
2607 2784 3.655777 TCCCAAAATAAGTGTCTCCACCT 59.344 43.478 0.00 0.00 42.88 4.00
2608 2785 3.756963 GTCCCAAAATAAGTGTCTCCACC 59.243 47.826 0.00 0.00 42.88 4.61
2609 2786 4.394729 TGTCCCAAAATAAGTGTCTCCAC 58.605 43.478 0.00 0.00 42.17 4.02
2610 2787 4.349636 TCTGTCCCAAAATAAGTGTCTCCA 59.650 41.667 0.00 0.00 0.00 3.86
2611 2788 4.906618 TCTGTCCCAAAATAAGTGTCTCC 58.093 43.478 0.00 0.00 0.00 3.71
2612 2789 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
2613 2790 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
2614 2791 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
2615 2792 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
2616 2793 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
2617 2794 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
2618 2795 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
2619 2796 7.758820 TTATACTCCCTCTGTCCCAAAATAA 57.241 36.000 0.00 0.00 0.00 1.40
2620 2797 7.758820 TTTATACTCCCTCTGTCCCAAAATA 57.241 36.000 0.00 0.00 0.00 1.40
2621 2798 6.652205 TTTATACTCCCTCTGTCCCAAAAT 57.348 37.500 0.00 0.00 0.00 1.82
2622 2799 6.457159 TTTTATACTCCCTCTGTCCCAAAA 57.543 37.500 0.00 0.00 0.00 2.44
2623 2800 6.652205 ATTTTATACTCCCTCTGTCCCAAA 57.348 37.500 0.00 0.00 0.00 3.28
2624 2801 7.947782 ATATTTTATACTCCCTCTGTCCCAA 57.052 36.000 0.00 0.00 0.00 4.12
2625 2802 7.349859 ACAATATTTTATACTCCCTCTGTCCCA 59.650 37.037 0.00 0.00 0.00 4.37
2626 2803 7.746703 ACAATATTTTATACTCCCTCTGTCCC 58.253 38.462 0.00 0.00 0.00 4.46
2627 2804 7.599245 CGACAATATTTTATACTCCCTCTGTCC 59.401 40.741 0.00 0.00 0.00 4.02
2628 2805 8.358148 TCGACAATATTTTATACTCCCTCTGTC 58.642 37.037 0.00 0.00 0.00 3.51
2629 2806 8.246430 TCGACAATATTTTATACTCCCTCTGT 57.754 34.615 0.00 0.00 0.00 3.41
2630 2807 8.979574 GTTCGACAATATTTTATACTCCCTCTG 58.020 37.037 0.00 0.00 0.00 3.35
2631 2808 8.148999 GGTTCGACAATATTTTATACTCCCTCT 58.851 37.037 0.00 0.00 0.00 3.69
2632 2809 7.929785 TGGTTCGACAATATTTTATACTCCCTC 59.070 37.037 0.00 0.00 0.00 4.30
2633 2810 7.798071 TGGTTCGACAATATTTTATACTCCCT 58.202 34.615 0.00 0.00 0.00 4.20
2634 2811 7.172703 CCTGGTTCGACAATATTTTATACTCCC 59.827 40.741 0.00 0.00 0.00 4.30
2635 2812 7.307811 GCCTGGTTCGACAATATTTTATACTCC 60.308 40.741 0.00 0.00 0.00 3.85
2636 2813 7.441458 AGCCTGGTTCGACAATATTTTATACTC 59.559 37.037 0.00 0.00 0.00 2.59
2637 2814 7.226720 CAGCCTGGTTCGACAATATTTTATACT 59.773 37.037 0.00 0.00 0.00 2.12
2638 2815 7.012044 ACAGCCTGGTTCGACAATATTTTATAC 59.988 37.037 0.00 0.00 0.00 1.47
2639 2816 7.051623 ACAGCCTGGTTCGACAATATTTTATA 58.948 34.615 0.00 0.00 0.00 0.98
2640 2817 5.885912 ACAGCCTGGTTCGACAATATTTTAT 59.114 36.000 0.00 0.00 0.00 1.40
2641 2818 5.250200 ACAGCCTGGTTCGACAATATTTTA 58.750 37.500 0.00 0.00 0.00 1.52
2642 2819 4.079253 ACAGCCTGGTTCGACAATATTTT 58.921 39.130 0.00 0.00 0.00 1.82
2651 2828 3.449377 TCATGTATTACAGCCTGGTTCGA 59.551 43.478 2.53 0.00 0.00 3.71
2655 2832 6.055588 GTGTATTCATGTATTACAGCCTGGT 58.944 40.000 2.53 0.00 0.00 4.00
2686 2866 6.321848 TCAACAACTAACGTCATGACTAGA 57.678 37.500 22.95 7.20 0.00 2.43
2728 2908 8.765488 ATGGTTGTAAATATCACCATGATCAA 57.235 30.769 0.00 0.00 38.26 2.57
2746 2926 1.635487 ACATGGTGCTAGGATGGTTGT 59.365 47.619 0.00 0.00 0.00 3.32
2749 2929 1.289160 ACACATGGTGCTAGGATGGT 58.711 50.000 0.00 0.00 36.98 3.55
2761 2941 6.534793 AGTTGTGCTTAAAGAAAAACACATGG 59.465 34.615 0.00 0.00 35.37 3.66
2762 2942 7.393327 CAGTTGTGCTTAAAGAAAAACACATG 58.607 34.615 0.00 0.00 35.37 3.21
2798 2978 9.679661 TGTTATGGAATTAATGAGTGCTCTTTA 57.320 29.630 0.68 2.66 0.00 1.85
2887 3070 9.453572 TCAATTATCTAAATCATGTATGAGGCC 57.546 33.333 0.00 0.00 40.64 5.19
2903 3086 5.308014 AGAACCATGCGCATCAATTATCTA 58.692 37.500 22.51 0.00 0.00 1.98
2968 3151 2.256117 AGCAACCGAATACCCTATGC 57.744 50.000 0.00 0.00 0.00 3.14
2969 3152 2.878406 CCAAGCAACCGAATACCCTATG 59.122 50.000 0.00 0.00 0.00 2.23
2970 3153 2.158667 CCCAAGCAACCGAATACCCTAT 60.159 50.000 0.00 0.00 0.00 2.57
2972 3155 0.034477 CCCAAGCAACCGAATACCCT 60.034 55.000 0.00 0.00 0.00 4.34
2974 3157 1.471287 GTTCCCAAGCAACCGAATACC 59.529 52.381 0.00 0.00 0.00 2.73
2975 3158 1.129811 CGTTCCCAAGCAACCGAATAC 59.870 52.381 0.00 0.00 0.00 1.89
2977 3160 0.250553 TCGTTCCCAAGCAACCGAAT 60.251 50.000 0.00 0.00 0.00 3.34
3012 3196 1.078426 CGGTGAGTGGGGATCAACC 60.078 63.158 0.00 0.00 30.24 3.77
3045 3238 1.071699 AGCGTTGAAGTTGGCCTTAGA 59.928 47.619 3.32 0.00 32.03 2.10
3063 3256 3.196685 AGACATCTGTTTAGGGTCTGAGC 59.803 47.826 0.00 0.00 37.49 4.26
3079 3272 9.399403 GGACAAAATCTAAAGAAAACAGACATC 57.601 33.333 0.00 0.00 0.00 3.06
3081 3274 7.066525 ACGGACAAAATCTAAAGAAAACAGACA 59.933 33.333 0.00 0.00 0.00 3.41
3085 3278 7.489757 CCAAACGGACAAAATCTAAAGAAAACA 59.510 33.333 0.00 0.00 0.00 2.83
3091 3284 6.021596 CGATCCAAACGGACAAAATCTAAAG 58.978 40.000 0.00 0.00 34.62 1.85
3095 3288 3.670625 TCGATCCAAACGGACAAAATCT 58.329 40.909 0.00 0.00 34.62 2.40
3131 3324 1.313812 GGAGGACGACATCTGGACGT 61.314 60.000 0.00 0.00 42.84 4.34
3246 3445 8.816894 CCTGGGTGATGAATAGTAACACTATAT 58.183 37.037 0.00 0.00 40.32 0.86
3247 3446 7.234782 CCCTGGGTGATGAATAGTAACACTATA 59.765 40.741 3.97 0.00 40.32 1.31
3248 3447 6.043243 CCCTGGGTGATGAATAGTAACACTAT 59.957 42.308 3.97 0.00 42.86 2.12
3249 3448 5.365605 CCCTGGGTGATGAATAGTAACACTA 59.634 44.000 3.97 0.00 34.82 2.74
3250 3449 4.164221 CCCTGGGTGATGAATAGTAACACT 59.836 45.833 3.97 0.00 0.00 3.55
3251 3450 4.080526 ACCCTGGGTGATGAATAGTAACAC 60.081 45.833 19.82 0.00 32.98 3.32
3252 3451 4.108570 ACCCTGGGTGATGAATAGTAACA 58.891 43.478 19.82 0.00 32.98 2.41
3253 3452 4.772886 ACCCTGGGTGATGAATAGTAAC 57.227 45.455 19.82 0.00 32.98 2.50
3264 3463 9.907723 GAATAACTTATTCTGCACCCTGGGTGA 62.908 44.444 42.58 27.49 46.15 4.02
3265 3464 7.850027 GAATAACTTATTCTGCACCCTGGGTG 61.850 46.154 36.31 36.31 46.08 4.61
3266 3465 1.372501 ACTTATTCTGCACCCTGGGT 58.627 50.000 14.05 14.05 35.62 4.51
3267 3466 2.514458 AACTTATTCTGCACCCTGGG 57.486 50.000 12.28 12.28 0.00 4.45
3268 3467 5.757850 GAATAACTTATTCTGCACCCTGG 57.242 43.478 12.55 0.00 41.00 4.45
3276 3475 7.848201 ACCTCGGGTGAAGAATAACTTATTCTG 60.848 40.741 20.22 10.00 43.39 3.02
3277 3476 6.156429 ACCTCGGGTGAAGAATAACTTATTCT 59.844 38.462 15.62 15.62 44.74 2.40
3278 3477 6.346896 ACCTCGGGTGAAGAATAACTTATTC 58.653 40.000 12.07 12.07 38.76 1.75
3279 3478 6.309389 ACCTCGGGTGAAGAATAACTTATT 57.691 37.500 0.00 0.00 39.13 1.40
3280 3479 5.952347 ACCTCGGGTGAAGAATAACTTAT 57.048 39.130 0.00 0.00 39.13 1.73
3281 3480 6.855763 TTACCTCGGGTGAAGAATAACTTA 57.144 37.500 5.90 0.00 36.67 2.24
3282 3481 5.750352 TTACCTCGGGTGAAGAATAACTT 57.250 39.130 5.90 0.00 38.14 2.66
3283 3482 5.952347 ATTACCTCGGGTGAAGAATAACT 57.048 39.130 5.90 0.00 36.19 2.24
3284 3483 6.997239 AAATTACCTCGGGTGAAGAATAAC 57.003 37.500 5.90 0.00 36.19 1.89
3285 3484 7.278424 CGTAAAATTACCTCGGGTGAAGAATAA 59.722 37.037 5.90 0.00 36.19 1.40
3286 3485 6.757947 CGTAAAATTACCTCGGGTGAAGAATA 59.242 38.462 5.90 0.00 36.19 1.75
3287 3486 5.583457 CGTAAAATTACCTCGGGTGAAGAAT 59.417 40.000 5.90 0.00 36.19 2.40
3288 3487 4.931002 CGTAAAATTACCTCGGGTGAAGAA 59.069 41.667 5.90 0.00 36.19 2.52
3289 3488 4.220382 TCGTAAAATTACCTCGGGTGAAGA 59.780 41.667 5.90 0.00 36.19 2.87
3290 3489 4.497300 TCGTAAAATTACCTCGGGTGAAG 58.503 43.478 5.90 0.00 36.19 3.02
3291 3490 4.533919 TCGTAAAATTACCTCGGGTGAA 57.466 40.909 5.90 0.00 36.19 3.18
3292 3491 4.160065 TGATCGTAAAATTACCTCGGGTGA 59.840 41.667 5.90 0.00 36.19 4.02
3293 3492 4.435425 TGATCGTAAAATTACCTCGGGTG 58.565 43.478 5.90 0.00 36.19 4.61
3294 3493 4.741321 TGATCGTAAAATTACCTCGGGT 57.259 40.909 1.14 1.14 40.16 5.28
3295 3494 6.259167 TGAAATGATCGTAAAATTACCTCGGG 59.741 38.462 0.00 0.00 0.00 5.14
3296 3495 7.241663 TGAAATGATCGTAAAATTACCTCGG 57.758 36.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.