Multiple sequence alignment - TraesCS6A01G332600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G332600 chr6A 100.000 2552 0 0 1 2552 564259071 564261622 0.000000e+00 4713.0
1 TraesCS6A01G332600 chr6A 84.805 770 68 31 824 1550 564132256 564133019 0.000000e+00 728.0
2 TraesCS6A01G332600 chr6A 84.129 775 63 36 824 1550 564238510 564239272 0.000000e+00 695.0
3 TraesCS6A01G332600 chr6A 84.109 774 64 31 824 1550 564191055 564191816 0.000000e+00 693.0
4 TraesCS6A01G332600 chr6A 83.759 548 55 16 825 1341 564117687 564118231 2.950000e-134 488.0
5 TraesCS6A01G332600 chr6A 94.915 59 2 1 725 782 481048254 481048196 9.720000e-15 91.6
6 TraesCS6A01G332600 chr6D 89.790 999 50 23 824 1784 420956415 420957399 0.000000e+00 1232.0
7 TraesCS6A01G332600 chr6D 97.326 374 5 3 1 372 420940534 420940904 4.630000e-177 630.0
8 TraesCS6A01G332600 chr6D 84.871 542 54 17 824 1342 420935527 420936063 2.910000e-144 521.0
9 TraesCS6A01G332600 chr6D 83.729 547 51 19 827 1341 420898985 420899525 1.370000e-132 483.0
10 TraesCS6A01G332600 chr6D 94.472 199 11 0 1352 1550 420899568 420899766 8.870000e-80 307.0
11 TraesCS6A01G332600 chr6D 88.293 205 18 5 381 581 420955844 420956046 9.120000e-60 241.0
12 TraesCS6A01G332600 chr6D 82.400 125 11 7 1608 1725 420936445 420936565 5.810000e-17 99.0
13 TraesCS6A01G332600 chr6B 85.682 887 64 28 939 1784 634329897 634330761 0.000000e+00 876.0
14 TraesCS6A01G332600 chr6B 94.055 471 19 4 1 470 634327258 634327720 0.000000e+00 706.0
15 TraesCS6A01G332600 chr6B 84.191 544 54 19 824 1342 634321721 634322257 1.360000e-137 499.0
16 TraesCS6A01G332600 chr6B 83.152 552 53 20 825 1341 634315505 634316051 3.840000e-128 468.0
17 TraesCS6A01G332600 chr6B 92.000 200 14 2 1351 1550 634316090 634316287 1.930000e-71 279.0
18 TraesCS6A01G332600 chr6B 91.270 126 3 2 824 941 634329656 634329781 5.650000e-37 165.0
19 TraesCS6A01G332600 chr6B 82.036 167 23 6 16 180 634312353 634312514 4.430000e-28 135.0
20 TraesCS6A01G332600 chr5D 88.070 285 24 8 1881 2155 485394977 485395261 1.890000e-86 329.0
21 TraesCS6A01G332600 chr5D 90.845 142 10 3 2411 2552 355455061 355454923 1.210000e-43 187.0
22 TraesCS6A01G332600 chr5D 81.657 169 16 9 632 785 543775689 543775521 2.670000e-25 126.0
23 TraesCS6A01G332600 chr3D 88.070 285 21 7 1884 2155 418216226 418215942 2.450000e-85 326.0
24 TraesCS6A01G332600 chr3D 86.268 284 30 7 1881 2155 283311351 283311634 1.480000e-77 300.0
25 TraesCS6A01G332600 chr3D 88.119 202 17 7 2189 2387 166501210 166501407 1.530000e-57 233.0
26 TraesCS6A01G332600 chr3D 85.294 204 23 7 2193 2393 8906327 8906128 1.200000e-48 204.0
27 TraesCS6A01G332600 chr2D 87.589 282 27 5 1881 2154 56324040 56324321 1.140000e-83 320.0
28 TraesCS6A01G332600 chr2D 81.988 161 18 2 632 781 37772500 37772660 2.670000e-25 126.0
29 TraesCS6A01G332600 chr2D 94.915 59 2 1 728 785 612720191 612720133 9.720000e-15 91.6
30 TraesCS6A01G332600 chr5B 87.189 281 23 10 1886 2155 340615423 340615701 8.870000e-80 307.0
31 TraesCS6A01G332600 chr5B 86.500 200 24 3 2193 2391 507983134 507982937 1.540000e-52 217.0
32 TraesCS6A01G332600 chr5B 85.354 198 24 5 2192 2387 80195885 80196079 1.550000e-47 200.0
33 TraesCS6A01G332600 chr5B 85.354 198 24 5 2192 2387 80600366 80600560 1.550000e-47 200.0
34 TraesCS6A01G332600 chr5B 91.852 135 9 1 2416 2550 584887710 584887842 1.210000e-43 187.0
35 TraesCS6A01G332600 chr5B 85.542 83 7 4 650 730 173225204 173225283 5.850000e-12 82.4
36 TraesCS6A01G332600 chr7B 86.316 285 29 6 1881 2155 181408011 181408295 4.130000e-78 302.0
37 TraesCS6A01G332600 chr7B 91.034 145 10 2 2407 2550 692302186 692302328 2.590000e-45 193.0
38 TraesCS6A01G332600 chr7B 91.111 135 10 1 2416 2550 730403275 730403407 5.610000e-42 182.0
39 TraesCS6A01G332600 chr2B 86.572 283 27 7 1884 2155 43229008 43228726 4.130000e-78 302.0
40 TraesCS6A01G332600 chr2B 85.915 213 20 9 2193 2399 631168432 631168640 4.270000e-53 219.0
41 TraesCS6A01G332600 chr2B 86.935 199 19 7 2192 2387 157991691 157991885 1.540000e-52 217.0
42 TraesCS6A01G332600 chr2B 91.538 130 9 1 2416 2545 572756350 572756223 7.260000e-41 178.0
43 TraesCS6A01G332600 chr2B 94.828 58 2 1 727 783 667871535 667871478 3.500000e-14 89.8
44 TraesCS6A01G332600 chr3B 86.316 285 25 8 1884 2155 544546129 544545846 5.340000e-77 298.0
45 TraesCS6A01G332600 chr3B 91.852 135 8 2 2416 2550 815966006 815965875 4.340000e-43 185.0
46 TraesCS6A01G332600 chr3A 85.911 291 26 10 1881 2158 712650862 712651150 1.920000e-76 296.0
47 TraesCS6A01G332600 chr1D 86.473 207 21 7 2190 2393 41299470 41299268 1.190000e-53 220.0
48 TraesCS6A01G332600 chrUn 84.360 211 23 10 2181 2387 92772574 92772778 5.570000e-47 198.0
49 TraesCS6A01G332600 chr7A 80.000 165 19 4 632 783 420845380 420845217 2.680000e-20 110.0
50 TraesCS6A01G332600 chr7A 83.168 101 17 0 629 729 383429053 383429153 2.700000e-15 93.5
51 TraesCS6A01G332600 chr7A 81.373 102 17 1 630 729 79556558 79556457 5.850000e-12 82.4
52 TraesCS6A01G332600 chr7A 78.146 151 18 8 643 780 161204397 161204545 5.850000e-12 82.4
53 TraesCS6A01G332600 chr2A 80.124 161 17 8 633 781 142712934 142712777 3.470000e-19 106.0
54 TraesCS6A01G332600 chr2A 76.647 167 25 10 632 785 195808664 195808499 2.100000e-11 80.5
55 TraesCS6A01G332600 chr4A 91.304 69 4 1 660 726 740529951 740530019 2.700000e-15 93.5
56 TraesCS6A01G332600 chr4A 94.828 58 2 1 725 781 374626788 374626845 3.500000e-14 89.8
57 TraesCS6A01G332600 chr4A 89.855 69 5 1 660 726 740525484 740525552 1.260000e-13 87.9
58 TraesCS6A01G332600 chr4A 89.855 69 5 1 660 726 740534418 740534486 1.260000e-13 87.9
59 TraesCS6A01G332600 chr1B 89.189 74 8 0 656 729 3268497 3268570 2.700000e-15 93.5
60 TraesCS6A01G332600 chr4B 91.176 68 4 2 727 792 28618514 28618447 9.720000e-15 91.6
61 TraesCS6A01G332600 chr4B 77.019 161 23 6 631 778 249035666 249035825 2.100000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G332600 chr6A 564259071 564261622 2551 False 4713.000000 4713 100.000000 1 2552 1 chr6A.!!$F5 2551
1 TraesCS6A01G332600 chr6A 564132256 564133019 763 False 728.000000 728 84.805000 824 1550 1 chr6A.!!$F2 726
2 TraesCS6A01G332600 chr6A 564238510 564239272 762 False 695.000000 695 84.129000 824 1550 1 chr6A.!!$F4 726
3 TraesCS6A01G332600 chr6A 564191055 564191816 761 False 693.000000 693 84.109000 824 1550 1 chr6A.!!$F3 726
4 TraesCS6A01G332600 chr6A 564117687 564118231 544 False 488.000000 488 83.759000 825 1341 1 chr6A.!!$F1 516
5 TraesCS6A01G332600 chr6D 420955844 420957399 1555 False 736.500000 1232 89.041500 381 1784 2 chr6D.!!$F3 1403
6 TraesCS6A01G332600 chr6D 420935527 420940904 5377 False 416.666667 630 88.199000 1 1725 3 chr6D.!!$F2 1724
7 TraesCS6A01G332600 chr6D 420898985 420899766 781 False 395.000000 483 89.100500 827 1550 2 chr6D.!!$F1 723
8 TraesCS6A01G332600 chr6B 634327258 634330761 3503 False 582.333333 876 90.335667 1 1784 3 chr6B.!!$F3 1783
9 TraesCS6A01G332600 chr6B 634321721 634322257 536 False 499.000000 499 84.191000 824 1342 1 chr6B.!!$F1 518
10 TraesCS6A01G332600 chr6B 634312353 634316287 3934 False 294.000000 468 85.729333 16 1550 3 chr6B.!!$F2 1534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
599 4922 0.661483 GACTCAAGCGGTTGCAAAGC 60.661 55.0 22.14 17.43 46.23 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2415 9077 0.03101 AGGGAGAAACGGGAGCCTAT 60.031 55.0 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.658593 CTGATTAGACGCCGGCCG 60.659 66.667 23.46 21.04 44.21 6.13
76 77 4.469552 GGCCGTTAACTGTCAACATTTAC 58.530 43.478 3.71 0.00 0.00 2.01
180 181 2.751166 TCTGGCAGCTCAAGTCTTAC 57.249 50.000 10.34 0.00 0.00 2.34
307 2919 8.514330 AACACTGAGTACAAATTCACCTAAAA 57.486 30.769 0.00 0.00 0.00 1.52
373 2985 4.508461 TGAAGCACAATTGTCCAATGAG 57.492 40.909 8.48 0.00 0.00 2.90
375 2987 2.241160 AGCACAATTGTCCAATGAGCA 58.759 42.857 8.48 0.00 0.00 4.26
376 2988 2.629137 AGCACAATTGTCCAATGAGCAA 59.371 40.909 8.48 0.00 0.00 3.91
377 2989 2.733026 GCACAATTGTCCAATGAGCAAC 59.267 45.455 8.48 0.00 0.00 4.17
378 2990 3.553508 GCACAATTGTCCAATGAGCAACT 60.554 43.478 8.48 0.00 0.00 3.16
379 2991 4.624015 CACAATTGTCCAATGAGCAACTT 58.376 39.130 8.48 0.00 0.00 2.66
385 2997 6.463995 TTGTCCAATGAGCAACTTAACTTT 57.536 33.333 0.00 0.00 0.00 2.66
442 3054 1.317613 TTTGGCACACTCACATCACC 58.682 50.000 0.00 0.00 39.29 4.02
471 3083 7.995488 AGCAACATAAGGAGAAATAGCTACATT 59.005 33.333 0.00 0.00 0.00 2.71
524 4837 8.506437 CAAGCTTACATCATGAGTTTAAGTGAA 58.494 33.333 16.38 1.44 0.00 3.18
531 4844 8.137437 ACATCATGAGTTTAAGTGAACAAAAGG 58.863 33.333 0.09 0.00 31.94 3.11
532 4845 7.038154 TCATGAGTTTAAGTGAACAAAAGGG 57.962 36.000 0.00 0.00 31.94 3.95
547 4860 5.726397 ACAAAAGGGTAGTTTGTGTTTTCC 58.274 37.500 1.94 0.00 45.19 3.13
548 4861 4.642445 AAAGGGTAGTTTGTGTTTTCCG 57.358 40.909 0.00 0.00 0.00 4.30
555 4868 7.231925 AGGGTAGTTTGTGTTTTCCGATAAATT 59.768 33.333 0.00 0.00 0.00 1.82
591 4914 5.548406 ACTTAAAATGTAGACTCAAGCGGT 58.452 37.500 0.00 0.00 0.00 5.68
599 4922 0.661483 GACTCAAGCGGTTGCAAAGC 60.661 55.000 22.14 17.43 46.23 3.51
607 4930 2.095059 AGCGGTTGCAAAGCATTAAGAG 60.095 45.455 24.21 0.82 46.59 2.85
612 4935 3.837213 TGCAAAGCATTAAGAGCTGAC 57.163 42.857 6.02 0.97 42.53 3.51
618 4941 6.541086 CAAAGCATTAAGAGCTGACAACTAG 58.459 40.000 6.02 0.00 42.53 2.57
619 4942 4.187694 AGCATTAAGAGCTGACAACTAGC 58.812 43.478 0.00 0.00 41.61 3.42
624 4947 4.399004 AAGAGCTGACAACTAGCCTATG 57.601 45.455 0.00 0.00 42.07 2.23
625 4948 3.370104 AGAGCTGACAACTAGCCTATGT 58.630 45.455 0.00 0.00 42.07 2.29
627 4950 1.936547 GCTGACAACTAGCCTATGTGC 59.063 52.381 0.00 0.00 35.15 4.57
628 4951 2.677902 GCTGACAACTAGCCTATGTGCA 60.678 50.000 0.00 0.00 35.15 4.57
629 4952 3.801698 CTGACAACTAGCCTATGTGCAT 58.198 45.455 0.00 0.00 0.00 3.96
631 4954 5.545588 CTGACAACTAGCCTATGTGCATAT 58.454 41.667 0.31 0.31 0.00 1.78
632 4955 6.664428 TGACAACTAGCCTATGTGCATATA 57.336 37.500 2.94 2.94 0.00 0.86
633 4956 6.455647 TGACAACTAGCCTATGTGCATATAC 58.544 40.000 0.00 0.00 0.00 1.47
635 4958 6.692486 ACAACTAGCCTATGTGCATATACTC 58.308 40.000 0.00 0.00 0.00 2.59
637 4960 6.767524 ACTAGCCTATGTGCATATACTCTC 57.232 41.667 0.00 0.00 0.00 3.20
640 4963 5.579047 AGCCTATGTGCATATACTCTCTCT 58.421 41.667 0.00 0.00 0.00 3.10
641 4964 6.726379 AGCCTATGTGCATATACTCTCTCTA 58.274 40.000 0.00 0.00 0.00 2.43
644 4967 8.134895 GCCTATGTGCATATACTCTCTCTATTC 58.865 40.741 0.00 0.00 0.00 1.75
646 4969 6.842437 TGTGCATATACTCTCTCTATTCCC 57.158 41.667 0.00 0.00 0.00 3.97
647 4970 6.314917 TGTGCATATACTCTCTCTATTCCCA 58.685 40.000 0.00 0.00 0.00 4.37
648 4971 6.209589 TGTGCATATACTCTCTCTATTCCCAC 59.790 42.308 0.00 0.00 0.00 4.61
650 4973 6.956435 TGCATATACTCTCTCTATTCCCACAT 59.044 38.462 0.00 0.00 0.00 3.21
651 4974 7.093596 TGCATATACTCTCTCTATTCCCACATG 60.094 40.741 0.00 0.00 0.00 3.21
652 4975 7.093552 GCATATACTCTCTCTATTCCCACATGT 60.094 40.741 0.00 0.00 0.00 3.21
653 4976 9.467796 CATATACTCTCTCTATTCCCACATGTA 57.532 37.037 0.00 0.00 0.00 2.29
655 4978 6.723298 ACTCTCTCTATTCCCACATGTAAG 57.277 41.667 0.00 0.00 0.00 2.34
656 4979 6.198639 ACTCTCTCTATTCCCACATGTAAGT 58.801 40.000 0.00 0.00 0.00 2.24
657 4980 6.670027 ACTCTCTCTATTCCCACATGTAAGTT 59.330 38.462 0.00 0.00 0.00 2.66
658 4981 7.181125 ACTCTCTCTATTCCCACATGTAAGTTT 59.819 37.037 0.00 0.00 0.00 2.66
659 4982 7.918076 TCTCTCTATTCCCACATGTAAGTTTT 58.082 34.615 0.00 0.00 0.00 2.43
660 4983 8.383175 TCTCTCTATTCCCACATGTAAGTTTTT 58.617 33.333 0.00 0.00 0.00 1.94
683 5006 8.680039 TTTTTAAAGATTTCAACGAGGGACTA 57.320 30.769 0.00 0.00 41.55 2.59
684 5007 8.857694 TTTTAAAGATTTCAACGAGGGACTAT 57.142 30.769 0.00 0.00 41.55 2.12
685 5008 9.947433 TTTTAAAGATTTCAACGAGGGACTATA 57.053 29.630 0.00 0.00 41.55 1.31
689 5012 6.910995 AGATTTCAACGAGGGACTATATACG 58.089 40.000 0.00 0.00 41.55 3.06
690 5013 6.713903 AGATTTCAACGAGGGACTATATACGA 59.286 38.462 0.00 0.00 41.55 3.43
691 5014 6.698008 TTTCAACGAGGGACTATATACGAA 57.302 37.500 0.00 0.00 41.55 3.85
692 5015 5.936686 TCAACGAGGGACTATATACGAAG 57.063 43.478 0.00 0.00 41.55 3.79
693 5016 4.214971 TCAACGAGGGACTATATACGAAGC 59.785 45.833 0.00 0.00 41.55 3.86
703 5026 9.918630 GGGACTATATACGAAGCAAAATAAGTA 57.081 33.333 0.00 0.00 0.00 2.24
713 5036 9.216117 ACGAAGCAAAATAAGTAAATCTACACT 57.784 29.630 0.00 0.00 0.00 3.55
781 5255 6.996180 TGTATTTAGGAATGGAGGGAGTAG 57.004 41.667 0.00 0.00 0.00 2.57
782 5256 6.449956 TGTATTTAGGAATGGAGGGAGTAGT 58.550 40.000 0.00 0.00 0.00 2.73
789 5263 4.284746 GGAATGGAGGGAGTAGTTAGGATG 59.715 50.000 0.00 0.00 0.00 3.51
808 5282 4.501400 GGATGCACAAAGCCAAAAGTAACT 60.501 41.667 0.00 0.00 44.83 2.24
810 5284 5.584253 TGCACAAAGCCAAAAGTAACTAA 57.416 34.783 0.00 0.00 44.83 2.24
992 5659 4.466726 AGGCACTAACTAGGTACAAAGAGG 59.533 45.833 0.00 0.00 36.02 3.69
993 5660 4.222366 GGCACTAACTAGGTACAAAGAGGT 59.778 45.833 0.00 0.00 0.00 3.85
995 5662 6.097981 GGCACTAACTAGGTACAAAGAGGTAT 59.902 42.308 0.00 0.00 0.00 2.73
996 5663 6.979238 GCACTAACTAGGTACAAAGAGGTATG 59.021 42.308 0.00 0.00 0.00 2.39
998 5665 5.354842 AACTAGGTACAAAGAGGTATGGC 57.645 43.478 0.00 0.00 0.00 4.40
1045 5718 4.477975 CGAGGACGCCGGTCTCAC 62.478 72.222 1.90 0.00 42.97 3.51
1323 5998 2.402640 GTACTCATACGCTTCCCTCG 57.597 55.000 0.00 0.00 0.00 4.63
1324 5999 1.674962 GTACTCATACGCTTCCCTCGT 59.325 52.381 0.00 0.00 43.20 4.18
1325 6000 0.456221 ACTCATACGCTTCCCTCGTG 59.544 55.000 0.00 0.00 40.69 4.35
1342 6017 1.560923 GTGTCTCCGTCAATGGATCG 58.439 55.000 0.00 0.00 37.41 3.69
1349 6031 0.570734 CGTCAATGGATCGTGCGTAC 59.429 55.000 0.00 0.00 0.00 3.67
1350 6032 0.928229 GTCAATGGATCGTGCGTACC 59.072 55.000 0.00 0.00 0.00 3.34
1370 6084 2.436417 CTTGTTTGATCGGTGGGACAT 58.564 47.619 0.00 0.00 44.52 3.06
1390 6114 3.103911 GTCGCCAGGTGACGAACG 61.104 66.667 17.52 0.00 40.47 3.95
1582 6370 1.481871 AATCAGCCCCAGCAAGAATG 58.518 50.000 0.00 0.00 43.56 2.67
1583 6371 0.396695 ATCAGCCCCAGCAAGAATGG 60.397 55.000 0.00 0.00 43.56 3.16
1593 6381 2.095110 CAGCAAGAATGGAACGCAATCA 60.095 45.455 0.00 0.00 0.00 2.57
1637 6438 0.655733 AGCACGTGTTGTTTTCCGAG 59.344 50.000 18.38 0.00 0.00 4.63
1647 6448 6.347402 CGTGTTGTTTTCCGAGTCTGAATATT 60.347 38.462 0.00 0.00 0.00 1.28
1659 6460 6.419116 CGAGTCTGAATATTTCGTCATCATGT 59.581 38.462 0.00 0.00 0.00 3.21
1660 6461 7.591426 CGAGTCTGAATATTTCGTCATCATGTA 59.409 37.037 0.00 0.00 0.00 2.29
1661 6462 9.249457 GAGTCTGAATATTTCGTCATCATGTAA 57.751 33.333 0.00 0.00 0.00 2.41
1662 6463 9.035607 AGTCTGAATATTTCGTCATCATGTAAC 57.964 33.333 0.00 0.00 0.00 2.50
1663 6464 9.035607 GTCTGAATATTTCGTCATCATGTAACT 57.964 33.333 0.00 0.00 0.00 2.24
1664 6465 9.249457 TCTGAATATTTCGTCATCATGTAACTC 57.751 33.333 0.00 0.00 0.00 3.01
1665 6466 8.940768 TGAATATTTCGTCATCATGTAACTCA 57.059 30.769 0.00 0.00 0.00 3.41
1666 6467 9.546428 TGAATATTTCGTCATCATGTAACTCAT 57.454 29.630 0.00 0.00 37.22 2.90
1671 6473 7.623268 TTCGTCATCATGTAACTCATAATCG 57.377 36.000 0.00 0.00 34.67 3.34
1700 6519 7.221828 TCGAAATGACAGATTTTATGTCTCG 57.778 36.000 7.52 8.28 45.87 4.04
1778 6630 3.465753 GCGTACCATCGCGTTCAA 58.534 55.556 5.77 0.00 46.31 2.69
1784 6636 3.244345 CGTACCATCGCGTTCAATATTGT 59.756 43.478 14.97 0.00 0.00 2.71
1786 6638 5.387035 CGTACCATCGCGTTCAATATTGTAG 60.387 44.000 14.97 8.80 0.00 2.74
1787 6639 4.439057 ACCATCGCGTTCAATATTGTAGT 58.561 39.130 14.97 0.00 0.00 2.73
1788 6640 5.593968 ACCATCGCGTTCAATATTGTAGTA 58.406 37.500 14.97 0.00 0.00 1.82
1789 6641 6.220930 ACCATCGCGTTCAATATTGTAGTAT 58.779 36.000 14.97 1.21 0.00 2.12
1790 6642 6.145534 ACCATCGCGTTCAATATTGTAGTATG 59.854 38.462 14.97 11.47 0.00 2.39
1791 6643 6.364976 CCATCGCGTTCAATATTGTAGTATGA 59.635 38.462 14.97 8.07 0.00 2.15
1792 6644 6.986424 TCGCGTTCAATATTGTAGTATGAG 57.014 37.500 14.97 7.12 0.00 2.90
1793 6645 6.500910 TCGCGTTCAATATTGTAGTATGAGT 58.499 36.000 14.97 0.00 0.00 3.41
1794 6646 6.416750 TCGCGTTCAATATTGTAGTATGAGTG 59.583 38.462 14.97 6.52 0.00 3.51
1795 6647 6.345803 CGCGTTCAATATTGTAGTATGAGTGG 60.346 42.308 14.97 0.00 0.00 4.00
1796 6648 6.073765 GCGTTCAATATTGTAGTATGAGTGGG 60.074 42.308 14.97 0.00 0.00 4.61
1797 6649 7.207383 CGTTCAATATTGTAGTATGAGTGGGA 58.793 38.462 14.97 0.00 0.00 4.37
1798 6650 7.709182 CGTTCAATATTGTAGTATGAGTGGGAA 59.291 37.037 14.97 0.00 0.00 3.97
1799 6651 9.391006 GTTCAATATTGTAGTATGAGTGGGAAA 57.609 33.333 14.97 0.00 0.00 3.13
1805 6657 8.732746 ATTGTAGTATGAGTGGGAAAATACAC 57.267 34.615 0.00 0.00 37.86 2.90
1806 6658 7.247456 TGTAGTATGAGTGGGAAAATACACA 57.753 36.000 0.00 0.00 39.99 3.72
1807 6659 7.857456 TGTAGTATGAGTGGGAAAATACACAT 58.143 34.615 0.00 0.00 39.99 3.21
1809 6661 6.957631 AGTATGAGTGGGAAAATACACATGA 58.042 36.000 0.00 0.00 39.99 3.07
1810 6662 7.050377 AGTATGAGTGGGAAAATACACATGAG 58.950 38.462 0.00 0.00 39.99 2.90
1811 6663 4.009675 TGAGTGGGAAAATACACATGAGC 58.990 43.478 0.00 0.00 39.99 4.26
1813 6665 4.265073 AGTGGGAAAATACACATGAGCTC 58.735 43.478 6.82 6.82 39.99 4.09
1814 6666 3.378427 GTGGGAAAATACACATGAGCTCC 59.622 47.826 12.15 0.00 37.54 4.70
1815 6667 3.266772 TGGGAAAATACACATGAGCTCCT 59.733 43.478 12.15 0.00 0.00 3.69
1816 6668 3.879892 GGGAAAATACACATGAGCTCCTC 59.120 47.826 12.15 0.00 0.00 3.71
1817 6669 4.384647 GGGAAAATACACATGAGCTCCTCT 60.385 45.833 12.15 0.00 0.00 3.69
1818 6670 4.574013 GGAAAATACACATGAGCTCCTCTG 59.426 45.833 12.15 8.78 0.00 3.35
1819 6671 3.834489 AATACACATGAGCTCCTCTGG 57.166 47.619 12.15 0.00 0.00 3.86
1820 6672 2.238084 TACACATGAGCTCCTCTGGT 57.762 50.000 12.15 5.86 0.00 4.00
1822 6674 0.743701 CACATGAGCTCCTCTGGTGC 60.744 60.000 12.15 2.79 41.85 5.01
1827 6679 4.921834 GCTCCTCTGGTGCTACAC 57.078 61.111 3.71 0.00 38.91 2.90
1840 6692 4.682778 GTGCTACACACCCCTATATGAA 57.317 45.455 0.00 0.00 44.02 2.57
1841 6693 5.228945 GTGCTACACACCCCTATATGAAT 57.771 43.478 0.00 0.00 44.02 2.57
1843 6695 6.947464 GTGCTACACACCCCTATATGAATAT 58.053 40.000 0.00 0.00 44.02 1.28
1844 6696 7.394816 GTGCTACACACCCCTATATGAATATT 58.605 38.462 0.00 0.00 44.02 1.28
1846 6698 9.106977 TGCTACACACCCCTATATGAATATTAA 57.893 33.333 0.00 0.00 0.00 1.40
1929 7886 2.267188 CGTATCCGTGACGAAGGAAA 57.733 50.000 6.54 0.00 42.98 3.13
1930 7887 2.805845 CGTATCCGTGACGAAGGAAAT 58.194 47.619 6.54 0.00 42.98 2.17
1931 7888 3.956233 CGTATCCGTGACGAAGGAAATA 58.044 45.455 6.54 0.00 42.98 1.40
1933 7890 4.497006 CGTATCCGTGACGAAGGAAATACT 60.497 45.833 6.54 0.00 42.98 2.12
1934 7891 3.226346 TCCGTGACGAAGGAAATACTG 57.774 47.619 6.54 0.00 32.86 2.74
1935 7892 2.559668 TCCGTGACGAAGGAAATACTGT 59.440 45.455 6.54 0.00 32.86 3.55
1937 7894 2.921754 CGTGACGAAGGAAATACTGTCC 59.078 50.000 0.00 0.00 35.17 4.02
1939 7896 2.821378 TGACGAAGGAAATACTGTCCGA 59.179 45.455 0.00 0.00 40.36 4.55
1940 7897 3.256383 TGACGAAGGAAATACTGTCCGAA 59.744 43.478 0.00 0.00 40.36 4.30
1941 7898 3.582780 ACGAAGGAAATACTGTCCGAAC 58.417 45.455 0.00 0.00 40.36 3.95
1944 7901 4.449743 CGAAGGAAATACTGTCCGAACAAA 59.550 41.667 0.00 0.00 40.36 2.83
1946 7903 6.512091 CGAAGGAAATACTGTCCGAACAAAAA 60.512 38.462 0.00 0.00 40.36 1.94
1947 7904 6.894339 AGGAAATACTGTCCGAACAAAAAT 57.106 33.333 0.00 0.00 40.36 1.82
1948 7905 6.909909 AGGAAATACTGTCCGAACAAAAATC 58.090 36.000 0.00 0.00 40.36 2.17
1953 8615 3.506067 ACTGTCCGAACAAAAATCCATCC 59.494 43.478 0.00 0.00 34.24 3.51
1954 8616 3.491342 TGTCCGAACAAAAATCCATCCA 58.509 40.909 0.00 0.00 30.70 3.41
1957 8619 4.684242 GTCCGAACAAAAATCCATCCAAAC 59.316 41.667 0.00 0.00 0.00 2.93
1958 8620 4.342378 TCCGAACAAAAATCCATCCAAACA 59.658 37.500 0.00 0.00 0.00 2.83
1959 8621 4.685628 CCGAACAAAAATCCATCCAAACAG 59.314 41.667 0.00 0.00 0.00 3.16
2005 8667 6.431198 TTTTCTTGCCATAGATACGTTTCC 57.569 37.500 0.00 0.00 0.00 3.13
2006 8668 5.353394 TTCTTGCCATAGATACGTTTCCT 57.647 39.130 0.00 0.00 0.00 3.36
2007 8669 4.693283 TCTTGCCATAGATACGTTTCCTG 58.307 43.478 0.00 0.00 0.00 3.86
2008 8670 3.469008 TGCCATAGATACGTTTCCTGG 57.531 47.619 16.16 16.16 0.00 4.45
2009 8671 2.769663 TGCCATAGATACGTTTCCTGGT 59.230 45.455 19.39 0.54 0.00 4.00
2010 8672 3.962063 TGCCATAGATACGTTTCCTGGTA 59.038 43.478 19.39 15.08 0.00 3.25
2011 8673 4.591498 TGCCATAGATACGTTTCCTGGTAT 59.409 41.667 19.39 4.25 32.27 2.73
2012 8674 5.071250 TGCCATAGATACGTTTCCTGGTATT 59.929 40.000 19.39 0.00 29.86 1.89
2013 8675 5.995897 GCCATAGATACGTTTCCTGGTATTT 59.004 40.000 19.39 0.00 29.86 1.40
2014 8676 6.485648 GCCATAGATACGTTTCCTGGTATTTT 59.514 38.462 19.39 0.00 29.86 1.82
2015 8677 7.307811 GCCATAGATACGTTTCCTGGTATTTTC 60.308 40.741 19.39 5.43 29.86 2.29
2016 8678 7.931948 CCATAGATACGTTTCCTGGTATTTTCT 59.068 37.037 13.65 0.00 29.86 2.52
2017 8679 8.979574 CATAGATACGTTTCCTGGTATTTTCTC 58.020 37.037 0.00 0.00 29.86 2.87
2018 8680 6.942976 AGATACGTTTCCTGGTATTTTCTCA 58.057 36.000 0.00 0.00 29.86 3.27
2019 8681 6.817140 AGATACGTTTCCTGGTATTTTCTCAC 59.183 38.462 0.00 0.00 29.86 3.51
2020 8682 3.744426 ACGTTTCCTGGTATTTTCTCACG 59.256 43.478 0.00 0.00 0.00 4.35
2021 8683 3.991773 CGTTTCCTGGTATTTTCTCACGA 59.008 43.478 0.00 0.00 0.00 4.35
2022 8684 4.449743 CGTTTCCTGGTATTTTCTCACGAA 59.550 41.667 0.00 0.00 0.00 3.85
2023 8685 5.049954 CGTTTCCTGGTATTTTCTCACGAAA 60.050 40.000 0.00 0.00 37.36 3.46
2024 8686 6.348213 CGTTTCCTGGTATTTTCTCACGAAAT 60.348 38.462 0.00 0.00 38.81 2.17
2025 8687 7.368059 GTTTCCTGGTATTTTCTCACGAAATT 58.632 34.615 0.00 0.00 38.81 1.82
2026 8688 7.519032 TTCCTGGTATTTTCTCACGAAATTT 57.481 32.000 0.00 0.00 38.81 1.82
2027 8689 7.141100 TCCTGGTATTTTCTCACGAAATTTC 57.859 36.000 8.20 8.20 38.81 2.17
2040 8702 3.838839 CGAAATTTCGCACAGTAGATCG 58.161 45.455 26.01 0.25 44.26 3.69
2041 8703 3.301835 CGAAATTTCGCACAGTAGATCGG 60.302 47.826 26.01 0.00 44.26 4.18
2042 8704 2.225068 ATTTCGCACAGTAGATCGGG 57.775 50.000 0.00 0.00 0.00 5.14
2043 8705 1.179152 TTTCGCACAGTAGATCGGGA 58.821 50.000 0.00 0.00 0.00 5.14
2044 8706 0.454600 TTCGCACAGTAGATCGGGAC 59.545 55.000 0.00 0.00 0.00 4.46
2045 8707 1.065928 CGCACAGTAGATCGGGACC 59.934 63.158 0.00 0.00 0.00 4.46
2046 8708 1.442148 GCACAGTAGATCGGGACCC 59.558 63.158 0.00 0.00 0.00 4.46
2047 8709 2.029307 GCACAGTAGATCGGGACCCC 62.029 65.000 4.46 0.00 0.00 4.95
2048 8710 0.686441 CACAGTAGATCGGGACCCCA 60.686 60.000 4.46 0.00 35.37 4.96
2049 8711 0.397254 ACAGTAGATCGGGACCCCAG 60.397 60.000 4.46 0.00 35.37 4.45
2050 8712 1.115930 CAGTAGATCGGGACCCCAGG 61.116 65.000 4.46 0.00 35.37 4.45
2051 8713 1.075450 GTAGATCGGGACCCCAGGT 60.075 63.158 4.46 0.00 39.44 4.00
2052 8714 0.690077 GTAGATCGGGACCCCAGGTT 60.690 60.000 4.46 0.00 35.25 3.50
2053 8715 0.043637 TAGATCGGGACCCCAGGTTT 59.956 55.000 4.46 0.00 35.25 3.27
2054 8716 1.077716 GATCGGGACCCCAGGTTTG 60.078 63.158 4.46 0.00 35.25 2.93
2055 8717 2.552231 GATCGGGACCCCAGGTTTGG 62.552 65.000 4.46 0.00 44.60 3.28
2056 8718 3.576259 CGGGACCCCAGGTTTGGT 61.576 66.667 4.46 0.00 43.40 3.67
2057 8719 2.225596 CGGGACCCCAGGTTTGGTA 61.226 63.158 4.46 0.00 43.40 3.25
2058 8720 1.568118 CGGGACCCCAGGTTTGGTAT 61.568 60.000 4.46 0.00 43.40 2.73
2059 8721 0.257905 GGGACCCCAGGTTTGGTATC 59.742 60.000 0.00 0.00 43.40 2.24
2060 8722 0.257905 GGACCCCAGGTTTGGTATCC 59.742 60.000 0.00 0.00 43.40 2.59
2061 8723 0.996583 GACCCCAGGTTTGGTATCCA 59.003 55.000 0.00 0.00 43.40 3.41
2062 8724 1.356398 GACCCCAGGTTTGGTATCCAA 59.644 52.381 0.00 0.00 43.40 3.53
2123 8785 8.810990 TTTGAATTTAATGTTCGTATAGGGGT 57.189 30.769 0.00 0.00 0.00 4.95
2124 8786 7.795482 TGAATTTAATGTTCGTATAGGGGTG 57.205 36.000 0.00 0.00 0.00 4.61
2126 8788 7.281324 TGAATTTAATGTTCGTATAGGGGTGTG 59.719 37.037 0.00 0.00 0.00 3.82
2127 8789 3.553828 AATGTTCGTATAGGGGTGTGG 57.446 47.619 0.00 0.00 0.00 4.17
2128 8790 2.234896 TGTTCGTATAGGGGTGTGGA 57.765 50.000 0.00 0.00 0.00 4.02
2129 8791 2.104967 TGTTCGTATAGGGGTGTGGAG 58.895 52.381 0.00 0.00 0.00 3.86
2131 8793 0.032912 TCGTATAGGGGTGTGGAGCA 60.033 55.000 0.00 0.00 0.00 4.26
2132 8794 1.048601 CGTATAGGGGTGTGGAGCAT 58.951 55.000 0.00 0.00 0.00 3.79
2133 8795 1.000955 CGTATAGGGGTGTGGAGCATC 59.999 57.143 0.00 0.00 0.00 3.91
2134 8796 2.330216 GTATAGGGGTGTGGAGCATCT 58.670 52.381 0.00 0.00 33.73 2.90
2135 8797 2.795291 ATAGGGGTGTGGAGCATCTA 57.205 50.000 0.00 0.00 33.73 1.98
2136 8798 2.088104 TAGGGGTGTGGAGCATCTAG 57.912 55.000 0.00 0.00 33.73 2.43
2137 8799 0.692419 AGGGGTGTGGAGCATCTAGG 60.692 60.000 0.00 0.00 33.73 3.02
2138 8800 0.983378 GGGGTGTGGAGCATCTAGGT 60.983 60.000 0.00 0.00 33.73 3.08
2139 8801 0.179000 GGGTGTGGAGCATCTAGGTG 59.821 60.000 0.00 0.00 33.73 4.00
2140 8802 0.462759 GGTGTGGAGCATCTAGGTGC 60.463 60.000 20.76 20.76 45.38 5.01
2151 8813 3.619038 GCATCTAGGTGCTATAAATCCGC 59.381 47.826 21.03 0.00 41.82 5.54
2152 8814 4.621747 GCATCTAGGTGCTATAAATCCGCT 60.622 45.833 21.03 0.00 41.82 5.52
2153 8815 5.482908 CATCTAGGTGCTATAAATCCGCTT 58.517 41.667 0.00 0.00 0.00 4.68
2154 8816 5.135508 TCTAGGTGCTATAAATCCGCTTC 57.864 43.478 0.00 0.00 0.00 3.86
2155 8817 4.833380 TCTAGGTGCTATAAATCCGCTTCT 59.167 41.667 0.00 0.00 0.00 2.85
2157 8819 5.140747 AGGTGCTATAAATCCGCTTCTAG 57.859 43.478 0.00 0.00 0.00 2.43
2158 8820 4.589374 AGGTGCTATAAATCCGCTTCTAGT 59.411 41.667 0.00 0.00 0.00 2.57
2160 8822 6.437793 AGGTGCTATAAATCCGCTTCTAGTAT 59.562 38.462 0.00 0.00 0.00 2.12
2161 8823 6.531948 GGTGCTATAAATCCGCTTCTAGTATG 59.468 42.308 0.00 0.00 0.00 2.39
2162 8824 7.313646 GTGCTATAAATCCGCTTCTAGTATGA 58.686 38.462 0.00 0.00 0.00 2.15
2164 8826 7.176865 TGCTATAAATCCGCTTCTAGTATGAGT 59.823 37.037 0.00 0.00 0.00 3.41
2165 8827 7.486551 GCTATAAATCCGCTTCTAGTATGAGTG 59.513 40.741 0.00 0.00 0.00 3.51
2167 8829 5.599999 AATCCGCTTCTAGTATGAGTGTT 57.400 39.130 0.00 0.00 0.00 3.32
2168 8830 4.371855 TCCGCTTCTAGTATGAGTGTTG 57.628 45.455 0.00 0.00 0.00 3.33
2169 8831 3.762288 TCCGCTTCTAGTATGAGTGTTGT 59.238 43.478 0.00 0.00 0.00 3.32
2170 8832 4.219944 TCCGCTTCTAGTATGAGTGTTGTT 59.780 41.667 0.00 0.00 0.00 2.83
2171 8833 4.929808 CCGCTTCTAGTATGAGTGTTGTTT 59.070 41.667 0.00 0.00 0.00 2.83
2172 8834 5.408604 CCGCTTCTAGTATGAGTGTTGTTTT 59.591 40.000 0.00 0.00 0.00 2.43
2173 8835 6.073222 CCGCTTCTAGTATGAGTGTTGTTTTT 60.073 38.462 0.00 0.00 0.00 1.94
2196 8858 7.790823 TTTCCCGTTATAGTAGCAAAATACC 57.209 36.000 0.00 0.00 0.00 2.73
2197 8859 5.857268 TCCCGTTATAGTAGCAAAATACCC 58.143 41.667 0.00 0.00 0.00 3.69
2199 8861 6.056884 CCCGTTATAGTAGCAAAATACCCAA 58.943 40.000 0.00 0.00 0.00 4.12
2200 8862 6.204108 CCCGTTATAGTAGCAAAATACCCAAG 59.796 42.308 0.00 0.00 0.00 3.61
2202 8864 6.293244 CGTTATAGTAGCAAAATACCCAAGCC 60.293 42.308 0.00 0.00 0.00 4.35
2203 8865 3.739401 AGTAGCAAAATACCCAAGCCT 57.261 42.857 0.00 0.00 0.00 4.58
2204 8866 3.621558 AGTAGCAAAATACCCAAGCCTC 58.378 45.455 0.00 0.00 0.00 4.70
2205 8867 2.907458 AGCAAAATACCCAAGCCTCT 57.093 45.000 0.00 0.00 0.00 3.69
2206 8868 4.473559 AGTAGCAAAATACCCAAGCCTCTA 59.526 41.667 0.00 0.00 0.00 2.43
2207 8869 4.526438 AGCAAAATACCCAAGCCTCTAT 57.474 40.909 0.00 0.00 0.00 1.98
2208 8870 4.871822 AGCAAAATACCCAAGCCTCTATT 58.128 39.130 0.00 0.00 0.00 1.73
2210 8872 4.038042 GCAAAATACCCAAGCCTCTATTCC 59.962 45.833 0.00 0.00 0.00 3.01
2211 8873 5.200483 CAAAATACCCAAGCCTCTATTCCA 58.800 41.667 0.00 0.00 0.00 3.53
2212 8874 4.713792 AATACCCAAGCCTCTATTCCAG 57.286 45.455 0.00 0.00 0.00 3.86
2213 8875 2.270434 ACCCAAGCCTCTATTCCAGA 57.730 50.000 0.00 0.00 0.00 3.86
2214 8876 1.840635 ACCCAAGCCTCTATTCCAGAC 59.159 52.381 0.00 0.00 0.00 3.51
2215 8877 1.839994 CCCAAGCCTCTATTCCAGACA 59.160 52.381 0.00 0.00 0.00 3.41
2216 8878 2.239654 CCCAAGCCTCTATTCCAGACAA 59.760 50.000 0.00 0.00 0.00 3.18
2218 8880 3.539604 CAAGCCTCTATTCCAGACAAGG 58.460 50.000 0.00 0.00 0.00 3.61
2219 8881 2.839228 AGCCTCTATTCCAGACAAGGT 58.161 47.619 0.00 0.00 0.00 3.50
2220 8882 3.185455 AGCCTCTATTCCAGACAAGGTT 58.815 45.455 0.00 0.00 0.00 3.50
2222 8884 4.043435 AGCCTCTATTCCAGACAAGGTTTT 59.957 41.667 0.00 0.00 0.00 2.43
2223 8885 4.767409 GCCTCTATTCCAGACAAGGTTTTT 59.233 41.667 0.00 0.00 0.00 1.94
2226 8888 5.385198 TCTATTCCAGACAAGGTTTTTGCT 58.615 37.500 0.00 0.00 0.00 3.91
2227 8889 4.590850 ATTCCAGACAAGGTTTTTGCTC 57.409 40.909 0.00 0.00 0.00 4.26
2228 8890 3.297134 TCCAGACAAGGTTTTTGCTCT 57.703 42.857 0.00 0.00 0.00 4.09
2229 8891 4.431416 TCCAGACAAGGTTTTTGCTCTA 57.569 40.909 0.00 0.00 0.00 2.43
2230 8892 4.787551 TCCAGACAAGGTTTTTGCTCTAA 58.212 39.130 0.00 0.00 0.00 2.10
2231 8893 4.821805 TCCAGACAAGGTTTTTGCTCTAAG 59.178 41.667 0.00 0.00 0.00 2.18
2233 8895 5.474876 CCAGACAAGGTTTTTGCTCTAAGAT 59.525 40.000 0.00 0.00 0.00 2.40
2235 8897 7.174946 CCAGACAAGGTTTTTGCTCTAAGATTA 59.825 37.037 0.00 0.00 0.00 1.75
2236 8898 8.567948 CAGACAAGGTTTTTGCTCTAAGATTAA 58.432 33.333 0.00 0.00 0.00 1.40
2238 8900 9.181805 GACAAGGTTTTTGCTCTAAGATTAAAC 57.818 33.333 0.00 0.00 0.00 2.01
2240 8902 7.833285 AGGTTTTTGCTCTAAGATTAAACCA 57.167 32.000 14.16 0.00 43.28 3.67
2241 8903 7.658261 AGGTTTTTGCTCTAAGATTAAACCAC 58.342 34.615 14.16 4.98 43.28 4.16
2242 8904 7.505923 AGGTTTTTGCTCTAAGATTAAACCACT 59.494 33.333 14.16 0.00 43.28 4.00
2245 8907 7.817418 TTTGCTCTAAGATTAAACCACTTGT 57.183 32.000 0.00 0.00 0.00 3.16
2246 8908 6.801539 TGCTCTAAGATTAAACCACTTGTG 57.198 37.500 0.00 0.00 0.00 3.33
2251 8913 8.740123 TCTAAGATTAAACCACTTGTGTGAAA 57.260 30.769 0.00 0.00 46.55 2.69
2252 8914 8.836413 TCTAAGATTAAACCACTTGTGTGAAAG 58.164 33.333 0.00 0.00 46.55 2.62
2253 8915 7.404671 AAGATTAAACCACTTGTGTGAAAGT 57.595 32.000 0.00 0.00 46.55 2.66
2259 8921 2.799126 ACTTGTGTGAAAGTGACCCA 57.201 45.000 0.00 0.00 38.95 4.51
2260 8922 3.297134 ACTTGTGTGAAAGTGACCCAT 57.703 42.857 0.00 0.00 38.95 4.00
2261 8923 2.951642 ACTTGTGTGAAAGTGACCCATG 59.048 45.455 0.00 0.00 38.95 3.66
2262 8924 1.979855 TGTGTGAAAGTGACCCATGG 58.020 50.000 4.14 4.14 0.00 3.66
2263 8925 1.214175 TGTGTGAAAGTGACCCATGGT 59.786 47.619 11.73 0.00 39.44 3.55
2264 8926 1.608590 GTGTGAAAGTGACCCATGGTG 59.391 52.381 11.73 4.77 35.25 4.17
2265 8927 1.492599 TGTGAAAGTGACCCATGGTGA 59.507 47.619 11.73 0.00 35.25 4.02
2266 8928 2.092158 TGTGAAAGTGACCCATGGTGAA 60.092 45.455 11.73 0.00 35.25 3.18
2268 8930 3.573967 GTGAAAGTGACCCATGGTGAATT 59.426 43.478 11.73 0.00 35.25 2.17
2269 8931 3.573538 TGAAAGTGACCCATGGTGAATTG 59.426 43.478 11.73 0.00 35.25 2.32
2270 8932 2.978156 AGTGACCCATGGTGAATTGT 57.022 45.000 11.73 0.00 35.25 2.71
2272 8934 2.158475 AGTGACCCATGGTGAATTGTGT 60.158 45.455 11.73 0.00 35.25 3.72
2273 8935 3.073798 AGTGACCCATGGTGAATTGTGTA 59.926 43.478 11.73 0.00 35.25 2.90
2274 8936 3.190535 GTGACCCATGGTGAATTGTGTAC 59.809 47.826 11.73 0.00 35.25 2.90
2275 8937 3.181439 TGACCCATGGTGAATTGTGTACA 60.181 43.478 11.73 0.00 35.25 2.90
2276 8938 4.016444 GACCCATGGTGAATTGTGTACAT 58.984 43.478 11.73 0.00 35.25 2.29
2277 8939 3.763360 ACCCATGGTGAATTGTGTACATG 59.237 43.478 11.73 0.00 32.98 3.21
2278 8940 4.015764 CCCATGGTGAATTGTGTACATGA 58.984 43.478 11.73 0.00 38.29 3.07
2280 8942 4.458642 CCATGGTGAATTGTGTACATGACA 59.541 41.667 2.57 0.00 38.29 3.58
2281 8943 5.125900 CCATGGTGAATTGTGTACATGACAT 59.874 40.000 2.57 0.00 41.14 3.06
2283 8945 5.069318 TGGTGAATTGTGTACATGACATGT 58.931 37.500 23.83 23.83 46.92 3.21
2284 8946 5.048852 TGGTGAATTGTGTACATGACATGTG 60.049 40.000 27.66 2.82 44.60 3.21
2285 8947 4.853196 GTGAATTGTGTACATGACATGTGC 59.147 41.667 27.66 26.14 44.60 4.57
2288 8950 6.598850 TGAATTGTGTACATGACATGTGCTAT 59.401 34.615 29.16 19.42 44.74 2.97
2289 8951 7.121020 TGAATTGTGTACATGACATGTGCTATT 59.879 33.333 29.16 24.26 44.74 1.73
2290 8952 8.504812 AATTGTGTACATGACATGTGCTATTA 57.495 30.769 29.16 16.46 44.74 0.98
2291 8953 8.681486 ATTGTGTACATGACATGTGCTATTAT 57.319 30.769 29.16 17.58 44.74 1.28
2292 8954 8.504812 TTGTGTACATGACATGTGCTATTATT 57.495 30.769 29.16 6.46 44.74 1.40
2293 8955 8.504812 TGTGTACATGACATGTGCTATTATTT 57.495 30.769 29.16 5.82 44.74 1.40
2294 8956 8.955388 TGTGTACATGACATGTGCTATTATTTT 58.045 29.630 29.16 5.37 44.74 1.82
2297 8959 7.408756 ACATGACATGTGCTATTATTTTGGT 57.591 32.000 20.21 0.00 43.01 3.67
2298 8960 8.518430 ACATGACATGTGCTATTATTTTGGTA 57.482 30.769 20.21 0.00 43.01 3.25
2300 8962 9.800433 CATGACATGTGCTATTATTTTGGTAAA 57.200 29.630 1.15 0.00 0.00 2.01
2303 8965 9.248291 GACATGTGCTATTATTTTGGTAAATGG 57.752 33.333 1.15 0.00 35.61 3.16
2304 8966 7.710475 ACATGTGCTATTATTTTGGTAAATGGC 59.290 33.333 0.00 0.00 35.61 4.40
2305 8967 7.416964 TGTGCTATTATTTTGGTAAATGGCT 57.583 32.000 0.00 0.00 35.61 4.75
2306 8968 7.264221 TGTGCTATTATTTTGGTAAATGGCTG 58.736 34.615 0.00 0.00 35.61 4.85
2307 8969 7.093552 TGTGCTATTATTTTGGTAAATGGCTGT 60.094 33.333 0.00 0.00 35.61 4.40
2309 8971 7.093552 TGCTATTATTTTGGTAAATGGCTGTGT 60.094 33.333 0.00 0.00 35.61 3.72
2310 8972 8.410141 GCTATTATTTTGGTAAATGGCTGTGTA 58.590 33.333 0.00 0.00 35.61 2.90
2311 8973 9.950680 CTATTATTTTGGTAAATGGCTGTGTAG 57.049 33.333 0.00 0.00 35.61 2.74
2312 8974 5.659440 ATTTTGGTAAATGGCTGTGTAGG 57.341 39.130 0.00 0.00 32.79 3.18
2313 8975 4.374689 TTTGGTAAATGGCTGTGTAGGA 57.625 40.909 0.00 0.00 0.00 2.94
2314 8976 4.374689 TTGGTAAATGGCTGTGTAGGAA 57.625 40.909 0.00 0.00 0.00 3.36
2315 8977 4.584638 TGGTAAATGGCTGTGTAGGAAT 57.415 40.909 0.00 0.00 0.00 3.01
2316 8978 4.269183 TGGTAAATGGCTGTGTAGGAATG 58.731 43.478 0.00 0.00 0.00 2.67
2317 8979 3.066760 GGTAAATGGCTGTGTAGGAATGC 59.933 47.826 0.00 0.00 0.00 3.56
2318 8980 2.512692 AATGGCTGTGTAGGAATGCA 57.487 45.000 0.00 0.00 0.00 3.96
2320 8982 1.753930 TGGCTGTGTAGGAATGCATG 58.246 50.000 0.00 0.00 0.00 4.06
2321 8983 1.027357 GGCTGTGTAGGAATGCATGG 58.973 55.000 0.00 0.00 0.00 3.66
2322 8984 1.683011 GGCTGTGTAGGAATGCATGGT 60.683 52.381 0.00 0.00 0.00 3.55
2323 8985 1.402968 GCTGTGTAGGAATGCATGGTG 59.597 52.381 0.00 0.00 0.00 4.17
2324 8986 2.715046 CTGTGTAGGAATGCATGGTGT 58.285 47.619 0.00 0.00 0.00 4.16
2325 8987 2.421073 CTGTGTAGGAATGCATGGTGTG 59.579 50.000 0.00 0.00 0.00 3.82
2337 8999 1.955778 CATGGTGTGCTCAGGTTTTGA 59.044 47.619 0.00 0.00 0.00 2.69
2338 9000 2.363306 TGGTGTGCTCAGGTTTTGAT 57.637 45.000 0.00 0.00 34.68 2.57
2339 9001 2.665165 TGGTGTGCTCAGGTTTTGATT 58.335 42.857 0.00 0.00 34.68 2.57
2341 9003 3.068024 TGGTGTGCTCAGGTTTTGATTTC 59.932 43.478 0.00 0.00 34.68 2.17
2342 9004 3.068024 GGTGTGCTCAGGTTTTGATTTCA 59.932 43.478 0.00 0.00 34.68 2.69
2343 9005 4.441356 GGTGTGCTCAGGTTTTGATTTCAA 60.441 41.667 0.00 0.00 34.68 2.69
2344 9006 5.108517 GTGTGCTCAGGTTTTGATTTCAAA 58.891 37.500 1.66 1.66 43.36 2.69
2346 9008 6.258507 GTGTGCTCAGGTTTTGATTTCAAATT 59.741 34.615 6.57 0.00 44.30 1.82
2347 9009 6.822676 TGTGCTCAGGTTTTGATTTCAAATTT 59.177 30.769 6.57 0.00 44.30 1.82
2348 9010 7.336427 TGTGCTCAGGTTTTGATTTCAAATTTT 59.664 29.630 6.57 0.00 44.30 1.82
2367 9029 2.999507 TTTTGAACGTGTGTGCAAGT 57.000 40.000 0.00 0.00 44.45 3.16
2369 9031 2.254918 TTGAACGTGTGTGCAAGTTG 57.745 45.000 0.00 0.00 44.86 3.16
2370 9032 1.160989 TGAACGTGTGTGCAAGTTGT 58.839 45.000 4.48 0.00 44.86 3.32
2371 9033 1.135831 TGAACGTGTGTGCAAGTTGTG 60.136 47.619 4.48 0.00 44.86 3.33
2372 9034 0.878416 AACGTGTGTGCAAGTTGTGT 59.122 45.000 4.48 0.00 43.62 3.72
2374 9036 1.258427 CGTGTGTGCAAGTTGTGTTG 58.742 50.000 4.48 0.00 0.00 3.33
2375 9037 1.627879 GTGTGTGCAAGTTGTGTTGG 58.372 50.000 4.48 0.00 0.00 3.77
2376 9038 1.067915 GTGTGTGCAAGTTGTGTTGGT 60.068 47.619 4.48 0.00 0.00 3.67
2377 9039 1.615883 TGTGTGCAAGTTGTGTTGGTT 59.384 42.857 4.48 0.00 0.00 3.67
2378 9040 1.991965 GTGTGCAAGTTGTGTTGGTTG 59.008 47.619 4.48 0.00 0.00 3.77
2379 9041 1.067283 TGTGCAAGTTGTGTTGGTTGG 60.067 47.619 4.48 0.00 0.00 3.77
2380 9042 1.067213 GTGCAAGTTGTGTTGGTTGGT 60.067 47.619 4.48 0.00 0.00 3.67
2382 9044 2.037772 TGCAAGTTGTGTTGGTTGGTTT 59.962 40.909 4.48 0.00 0.00 3.27
2383 9045 3.258372 TGCAAGTTGTGTTGGTTGGTTTA 59.742 39.130 4.48 0.00 0.00 2.01
2384 9046 3.862845 GCAAGTTGTGTTGGTTGGTTTAG 59.137 43.478 4.48 0.00 0.00 1.85
2385 9047 3.793797 AGTTGTGTTGGTTGGTTTAGC 57.206 42.857 0.00 0.00 0.00 3.09
2386 9048 3.093057 AGTTGTGTTGGTTGGTTTAGCA 58.907 40.909 0.00 0.00 0.00 3.49
2387 9049 3.704061 AGTTGTGTTGGTTGGTTTAGCAT 59.296 39.130 0.00 0.00 0.00 3.79
2388 9050 4.161377 AGTTGTGTTGGTTGGTTTAGCATT 59.839 37.500 0.00 0.00 0.00 3.56
2389 9051 4.744795 TGTGTTGGTTGGTTTAGCATTT 57.255 36.364 0.00 0.00 0.00 2.32
2390 9052 5.091261 TGTGTTGGTTGGTTTAGCATTTT 57.909 34.783 0.00 0.00 0.00 1.82
2391 9053 5.491982 TGTGTTGGTTGGTTTAGCATTTTT 58.508 33.333 0.00 0.00 0.00 1.94
2408 9070 1.937278 TTTTTGTGTGCATGCACCAG 58.063 45.000 40.01 0.00 45.63 4.00
2409 9071 0.822811 TTTTGTGTGCATGCACCAGT 59.177 45.000 40.01 0.00 45.63 4.00
2411 9073 0.822811 TTGTGTGCATGCACCAGTTT 59.177 45.000 40.01 0.00 45.63 2.66
2412 9074 0.102663 TGTGTGCATGCACCAGTTTG 59.897 50.000 40.01 0.00 45.63 2.93
2413 9075 0.102844 GTGTGCATGCACCAGTTTGT 59.897 50.000 40.01 0.00 45.63 2.83
2414 9076 0.102663 TGTGCATGCACCAGTTTGTG 59.897 50.000 40.01 0.00 45.63 3.33
2415 9077 0.385029 GTGCATGCACCAGTTTGTGA 59.615 50.000 35.69 0.12 40.79 3.58
2417 9079 2.228582 GTGCATGCACCAGTTTGTGATA 59.771 45.455 35.69 0.00 40.79 2.15
2418 9080 2.488937 TGCATGCACCAGTTTGTGATAG 59.511 45.455 18.46 0.00 38.55 2.08
2419 9081 2.159338 GCATGCACCAGTTTGTGATAGG 60.159 50.000 14.21 0.00 38.55 2.57
2420 9082 1.533625 TGCACCAGTTTGTGATAGGC 58.466 50.000 0.00 0.00 38.55 3.93
2424 9086 1.282157 ACCAGTTTGTGATAGGCTCCC 59.718 52.381 0.00 0.00 0.00 4.30
2425 9087 1.656652 CAGTTTGTGATAGGCTCCCG 58.343 55.000 0.00 0.00 0.00 5.14
2426 9088 1.066143 CAGTTTGTGATAGGCTCCCGT 60.066 52.381 0.00 0.00 0.00 5.28
2427 9089 1.628846 AGTTTGTGATAGGCTCCCGTT 59.371 47.619 0.00 0.00 0.00 4.44
2428 9090 2.039879 AGTTTGTGATAGGCTCCCGTTT 59.960 45.455 0.00 0.00 0.00 3.60
2430 9092 1.568504 TGTGATAGGCTCCCGTTTCT 58.431 50.000 0.00 0.00 0.00 2.52
2431 9093 1.480954 TGTGATAGGCTCCCGTTTCTC 59.519 52.381 0.00 0.00 0.00 2.87
2432 9094 1.120530 TGATAGGCTCCCGTTTCTCC 58.879 55.000 0.00 0.00 0.00 3.71
2433 9095 0.393448 GATAGGCTCCCGTTTCTCCC 59.607 60.000 0.00 0.00 0.00 4.30
2434 9096 0.031010 ATAGGCTCCCGTTTCTCCCT 60.031 55.000 0.00 0.00 0.00 4.20
2437 9129 1.518302 GCTCCCGTTTCTCCCTCTC 59.482 63.158 0.00 0.00 0.00 3.20
2447 9139 4.393371 CGTTTCTCCCTCTCAATTTTCTCC 59.607 45.833 0.00 0.00 0.00 3.71
2448 9140 3.895232 TCTCCCTCTCAATTTTCTCCG 57.105 47.619 0.00 0.00 0.00 4.63
2449 9141 2.093447 TCTCCCTCTCAATTTTCTCCGC 60.093 50.000 0.00 0.00 0.00 5.54
2450 9142 1.009829 CCCTCTCAATTTTCTCCGCG 58.990 55.000 0.00 0.00 0.00 6.46
2453 9145 2.069273 CTCTCAATTTTCTCCGCGTGT 58.931 47.619 4.92 0.00 0.00 4.49
2455 9147 1.128692 CTCAATTTTCTCCGCGTGTCC 59.871 52.381 4.92 0.00 0.00 4.02
2456 9148 0.168128 CAATTTTCTCCGCGTGTCCC 59.832 55.000 4.92 0.00 0.00 4.46
2458 9150 0.391263 ATTTTCTCCGCGTGTCCCTC 60.391 55.000 4.92 0.00 0.00 4.30
2461 9153 2.752238 CTCCGCGTGTCCCTCTCT 60.752 66.667 4.92 0.00 0.00 3.10
2465 9157 2.336478 CGCGTGTCCCTCTCTCTGT 61.336 63.158 0.00 0.00 0.00 3.41
2469 9161 1.613925 CGTGTCCCTCTCTCTGTCAAA 59.386 52.381 0.00 0.00 0.00 2.69
2470 9162 2.352225 CGTGTCCCTCTCTCTGTCAAAG 60.352 54.545 0.00 0.00 0.00 2.77
2472 9164 1.066502 GTCCCTCTCTCTGTCAAAGGC 60.067 57.143 0.00 0.00 0.00 4.35
2473 9165 1.203237 TCCCTCTCTCTGTCAAAGGCT 60.203 52.381 0.00 0.00 0.00 4.58
2474 9166 1.206849 CCCTCTCTCTGTCAAAGGCTC 59.793 57.143 0.00 0.00 0.00 4.70
2475 9167 1.135141 CCTCTCTCTGTCAAAGGCTCG 60.135 57.143 0.00 0.00 0.00 5.03
2476 9168 0.244994 TCTCTCTGTCAAAGGCTCGC 59.755 55.000 0.00 0.00 0.00 5.03
2477 9169 0.739112 CTCTCTGTCAAAGGCTCGCC 60.739 60.000 0.00 0.00 0.00 5.54
2478 9170 1.004560 CTCTGTCAAAGGCTCGCCA 60.005 57.895 11.02 0.00 38.92 5.69
2479 9171 1.004560 TCTGTCAAAGGCTCGCCAG 60.005 57.895 11.02 0.00 38.92 4.85
2480 9172 2.032528 TGTCAAAGGCTCGCCAGG 59.967 61.111 11.02 0.00 38.92 4.45
2481 9173 3.435186 GTCAAAGGCTCGCCAGGC 61.435 66.667 11.02 0.00 45.92 4.85
2494 9186 3.281240 CAGGCATCCTGTGGTTGC 58.719 61.111 10.27 10.27 45.82 4.17
2495 9187 1.303888 CAGGCATCCTGTGGTTGCT 60.304 57.895 16.20 3.74 45.82 3.91
2496 9188 1.001641 AGGCATCCTGTGGTTGCTC 60.002 57.895 16.20 8.85 44.92 4.26
2497 9189 2.048603 GGCATCCTGTGGTTGCTCC 61.049 63.158 16.20 1.39 44.92 4.70
2498 9190 1.303561 GCATCCTGTGGTTGCTCCA 60.304 57.895 11.19 0.00 42.98 3.86
2506 9198 1.074775 TGGTTGCTCCACATCCACC 59.925 57.895 0.00 0.00 42.15 4.61
2507 9199 2.040544 GGTTGCTCCACATCCACCG 61.041 63.158 0.00 0.00 37.96 4.94
2508 9200 2.359850 TTGCTCCACATCCACCGC 60.360 61.111 0.00 0.00 0.00 5.68
2510 9202 2.512515 GCTCCACATCCACCGCTC 60.513 66.667 0.00 0.00 0.00 5.03
2511 9203 2.981302 CTCCACATCCACCGCTCA 59.019 61.111 0.00 0.00 0.00 4.26
2512 9204 1.448540 CTCCACATCCACCGCTCAC 60.449 63.158 0.00 0.00 0.00 3.51
2513 9205 2.436646 CCACATCCACCGCTCACC 60.437 66.667 0.00 0.00 0.00 4.02
2515 9207 4.760047 ACATCCACCGCTCACCGC 62.760 66.667 0.00 0.00 35.03 5.68
2516 9208 4.457496 CATCCACCGCTCACCGCT 62.457 66.667 0.00 0.00 36.13 5.52
2519 9211 4.680237 CCACCGCTCACCGCTCAA 62.680 66.667 0.00 0.00 36.13 3.02
2520 9212 3.414700 CACCGCTCACCGCTCAAC 61.415 66.667 0.00 0.00 36.13 3.18
2521 9213 3.923864 ACCGCTCACCGCTCAACA 61.924 61.111 0.00 0.00 36.13 3.33
2522 9214 3.114616 CCGCTCACCGCTCAACAG 61.115 66.667 0.00 0.00 36.13 3.16
2531 9223 4.487412 GCTCAACAGCATGCCGCC 62.487 66.667 15.66 0.00 46.06 6.13
2548 9240 4.849329 CGCTCCACCGCCGTAGTC 62.849 72.222 0.00 0.00 0.00 2.59
2549 9241 4.849329 GCTCCACCGCCGTAGTCG 62.849 72.222 0.00 0.00 0.00 4.18
2550 9242 4.849329 CTCCACCGCCGTAGTCGC 62.849 72.222 0.00 0.00 35.54 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
180 181 1.876156 GTCTTTCACCACAGCCAAGAG 59.124 52.381 0.00 0.00 0.00 2.85
254 2866 5.410067 TCAGCCTCTTTGTTGTTTCTTTTG 58.590 37.500 0.00 0.00 0.00 2.44
320 2932 3.353557 TGCCGATACTCTGTACTCAGTT 58.646 45.455 3.05 0.00 41.91 3.16
323 2935 6.459670 TTTTATGCCGATACTCTGTACTCA 57.540 37.500 0.00 0.00 0.00 3.41
337 2949 4.922692 TGTGCTTCAAAGAATTTTATGCCG 59.077 37.500 0.00 0.00 35.03 5.69
385 2997 5.125257 TGTTTGTCAGAGCTTTGTCAATTCA 59.875 36.000 15.56 14.38 0.00 2.57
402 3014 1.133407 TCTTTGCCGTGGTTGTTTGTC 59.867 47.619 0.00 0.00 0.00 3.18
442 3054 5.525378 AGCTATTTCTCCTTATGTTGCTTCG 59.475 40.000 0.00 0.00 0.00 3.79
471 3083 8.871629 TGTTTAGCTTTCCATGGTATTTAGAA 57.128 30.769 12.58 0.00 0.00 2.10
524 4837 5.622687 CGGAAAACACAAACTACCCTTTTGT 60.623 40.000 0.00 0.00 45.90 2.83
529 4842 3.564053 TCGGAAAACACAAACTACCCT 57.436 42.857 0.00 0.00 0.00 4.34
530 4843 5.945466 TTATCGGAAAACACAAACTACCC 57.055 39.130 0.00 0.00 0.00 3.69
531 4844 7.148869 GCAATTTATCGGAAAACACAAACTACC 60.149 37.037 0.00 0.00 0.00 3.18
532 4845 7.408921 CGCAATTTATCGGAAAACACAAACTAC 60.409 37.037 0.00 0.00 0.00 2.73
589 4912 3.057315 TCAGCTCTTAATGCTTTGCAACC 60.057 43.478 0.00 0.00 43.62 3.77
591 4914 3.569277 TGTCAGCTCTTAATGCTTTGCAA 59.431 39.130 0.00 0.00 43.62 4.08
599 4922 4.764172 AGGCTAGTTGTCAGCTCTTAATG 58.236 43.478 0.00 0.00 39.09 1.90
607 4930 1.936547 GCACATAGGCTAGTTGTCAGC 59.063 52.381 0.00 0.00 38.35 4.26
612 4935 6.929625 AGAGTATATGCACATAGGCTAGTTG 58.070 40.000 0.00 0.49 34.04 3.16
618 4941 5.913137 AGAGAGAGTATATGCACATAGGC 57.087 43.478 0.00 0.00 0.00 3.93
619 4942 8.629158 GGAATAGAGAGAGTATATGCACATAGG 58.371 40.741 0.00 0.00 0.00 2.57
624 4947 6.209589 TGTGGGAATAGAGAGAGTATATGCAC 59.790 42.308 0.00 0.00 0.00 4.57
625 4948 6.314917 TGTGGGAATAGAGAGAGTATATGCA 58.685 40.000 0.00 0.00 0.00 3.96
627 4950 8.359875 ACATGTGGGAATAGAGAGAGTATATG 57.640 38.462 0.00 0.00 0.00 1.78
629 4952 9.521841 CTTACATGTGGGAATAGAGAGAGTATA 57.478 37.037 9.11 0.00 0.00 1.47
631 4954 7.355101 ACTTACATGTGGGAATAGAGAGAGTA 58.645 38.462 9.11 0.00 0.00 2.59
632 4955 6.198639 ACTTACATGTGGGAATAGAGAGAGT 58.801 40.000 9.11 0.00 0.00 3.24
633 4956 6.723298 ACTTACATGTGGGAATAGAGAGAG 57.277 41.667 9.11 0.00 0.00 3.20
635 4958 8.567285 AAAAACTTACATGTGGGAATAGAGAG 57.433 34.615 9.11 0.00 0.00 3.20
658 4981 7.576861 AGTCCCTCGTTGAAATCTTTAAAAA 57.423 32.000 0.00 0.00 0.00 1.94
659 4982 8.857694 ATAGTCCCTCGTTGAAATCTTTAAAA 57.142 30.769 0.00 0.00 0.00 1.52
663 4986 7.866393 CGTATATAGTCCCTCGTTGAAATCTTT 59.134 37.037 0.00 0.00 0.00 2.52
664 4987 7.230108 TCGTATATAGTCCCTCGTTGAAATCTT 59.770 37.037 0.00 0.00 0.00 2.40
665 4988 6.713903 TCGTATATAGTCCCTCGTTGAAATCT 59.286 38.462 0.00 0.00 0.00 2.40
666 4989 6.906659 TCGTATATAGTCCCTCGTTGAAATC 58.093 40.000 0.00 0.00 0.00 2.17
667 4990 6.889301 TCGTATATAGTCCCTCGTTGAAAT 57.111 37.500 0.00 0.00 0.00 2.17
668 4991 6.698008 TTCGTATATAGTCCCTCGTTGAAA 57.302 37.500 0.00 0.00 0.00 2.69
669 4992 5.278169 GCTTCGTATATAGTCCCTCGTTGAA 60.278 44.000 0.00 0.00 0.00 2.69
670 4993 4.214971 GCTTCGTATATAGTCCCTCGTTGA 59.785 45.833 0.00 0.00 0.00 3.18
671 4994 4.023450 TGCTTCGTATATAGTCCCTCGTTG 60.023 45.833 0.00 0.00 0.00 4.10
672 4995 4.139786 TGCTTCGTATATAGTCCCTCGTT 58.860 43.478 0.00 0.00 0.00 3.85
673 4996 3.748083 TGCTTCGTATATAGTCCCTCGT 58.252 45.455 0.00 0.00 0.00 4.18
674 4997 4.761235 TTGCTTCGTATATAGTCCCTCG 57.239 45.455 0.00 0.00 0.00 4.63
675 4998 9.141400 CTTATTTTGCTTCGTATATAGTCCCTC 57.859 37.037 0.00 0.00 0.00 4.30
676 4999 8.648693 ACTTATTTTGCTTCGTATATAGTCCCT 58.351 33.333 0.00 0.00 0.00 4.20
677 5000 8.828688 ACTTATTTTGCTTCGTATATAGTCCC 57.171 34.615 0.00 0.00 0.00 4.46
687 5010 9.216117 AGTGTAGATTTACTTATTTTGCTTCGT 57.784 29.630 0.00 0.00 0.00 3.85
752 5226 6.447084 TCCCTCCATTCCTAAATACAAGTCTT 59.553 38.462 0.00 0.00 0.00 3.01
754 5228 6.126739 ACTCCCTCCATTCCTAAATACAAGTC 60.127 42.308 0.00 0.00 0.00 3.01
755 5229 5.731678 ACTCCCTCCATTCCTAAATACAAGT 59.268 40.000 0.00 0.00 0.00 3.16
759 5233 6.997942 ACTACTCCCTCCATTCCTAAATAC 57.002 41.667 0.00 0.00 0.00 1.89
761 5235 6.559157 CCTAACTACTCCCTCCATTCCTAAAT 59.441 42.308 0.00 0.00 0.00 1.40
764 5238 4.735537 TCCTAACTACTCCCTCCATTCCTA 59.264 45.833 0.00 0.00 0.00 2.94
765 5239 3.536434 TCCTAACTACTCCCTCCATTCCT 59.464 47.826 0.00 0.00 0.00 3.36
766 5240 3.924922 TCCTAACTACTCCCTCCATTCC 58.075 50.000 0.00 0.00 0.00 3.01
767 5241 4.262678 GCATCCTAACTACTCCCTCCATTC 60.263 50.000 0.00 0.00 0.00 2.67
768 5242 3.648545 GCATCCTAACTACTCCCTCCATT 59.351 47.826 0.00 0.00 0.00 3.16
770 5244 2.023404 TGCATCCTAACTACTCCCTCCA 60.023 50.000 0.00 0.00 0.00 3.86
772 5246 3.031736 TGTGCATCCTAACTACTCCCTC 58.968 50.000 0.00 0.00 0.00 4.30
781 5255 3.658757 TTTGGCTTTGTGCATCCTAAC 57.341 42.857 0.00 0.00 45.15 2.34
782 5256 3.640967 ACTTTTGGCTTTGTGCATCCTAA 59.359 39.130 0.00 0.00 45.15 2.69
789 5263 5.633601 GGATTAGTTACTTTTGGCTTTGTGC 59.366 40.000 0.00 0.00 41.94 4.57
808 5282 8.958119 ATAAGCATCTGTTTTTAGTCGGATTA 57.042 30.769 0.00 0.00 0.00 1.75
810 5284 7.552687 TCAATAAGCATCTGTTTTTAGTCGGAT 59.447 33.333 0.00 0.00 0.00 4.18
984 5651 1.686115 GCCATGGCCATACCTCTTTGT 60.686 52.381 27.24 0.00 40.22 2.83
985 5652 1.035139 GCCATGGCCATACCTCTTTG 58.965 55.000 27.24 4.60 40.22 2.77
986 5653 0.466189 CGCCATGGCCATACCTCTTT 60.466 55.000 30.79 0.00 40.22 2.52
987 5654 1.149174 CGCCATGGCCATACCTCTT 59.851 57.895 30.79 0.00 40.22 2.85
988 5655 1.766059 TCGCCATGGCCATACCTCT 60.766 57.895 30.79 0.00 40.22 3.69
989 5656 1.598130 GTCGCCATGGCCATACCTC 60.598 63.158 30.79 9.51 40.22 3.85
992 5659 2.972505 CCGTCGCCATGGCCATAC 60.973 66.667 30.79 23.16 37.98 2.39
993 5660 3.157949 TCCGTCGCCATGGCCATA 61.158 61.111 30.79 13.97 37.98 2.74
998 5665 4.873129 CGTCCTCCGTCGCCATGG 62.873 72.222 7.63 7.63 0.00 3.66
1013 5680 4.617486 TCGTGCAAGCGACGTCGT 62.617 61.111 35.48 21.21 42.22 4.34
1016 5683 3.973516 TCCTCGTGCAAGCGACGT 61.974 61.111 13.60 0.00 38.04 4.34
1041 5714 0.668706 CCACGAGAACCAGCAGTGAG 60.669 60.000 0.00 0.00 35.03 3.51
1045 5718 2.031012 TGCCACGAGAACCAGCAG 59.969 61.111 0.00 0.00 0.00 4.24
1128 5801 2.501723 CTCTGGGCTGTACAGGTTGTAT 59.498 50.000 23.95 0.00 35.05 2.29
1322 5997 1.560923 GATCCATTGACGGAGACACG 58.439 55.000 0.00 0.00 38.83 4.49
1323 5998 1.135083 ACGATCCATTGACGGAGACAC 60.135 52.381 0.00 0.00 38.83 3.67
1324 5999 1.135112 CACGATCCATTGACGGAGACA 60.135 52.381 0.00 0.00 38.83 3.41
1325 6000 1.560923 CACGATCCATTGACGGAGAC 58.439 55.000 0.00 0.00 38.83 3.36
1342 6017 1.127951 CCGATCAAACAAGGTACGCAC 59.872 52.381 0.00 0.00 0.00 5.34
1349 6031 1.165270 GTCCCACCGATCAAACAAGG 58.835 55.000 0.00 0.00 0.00 3.61
1350 6032 1.890876 TGTCCCACCGATCAAACAAG 58.109 50.000 0.00 0.00 0.00 3.16
1582 6370 7.472543 AGTAGTATTGATTTTGATTGCGTTCC 58.527 34.615 0.00 0.00 0.00 3.62
1583 6371 7.370836 CGAGTAGTATTGATTTTGATTGCGTTC 59.629 37.037 0.00 0.00 0.00 3.95
1593 6381 5.615925 AGGCCTCGAGTAGTATTGATTTT 57.384 39.130 12.31 0.00 0.00 1.82
1637 6438 9.035607 AGTTACATGATGACGAAATATTCAGAC 57.964 33.333 0.00 0.00 0.00 3.51
1647 6448 7.422399 TCGATTATGAGTTACATGATGACGAA 58.578 34.615 0.00 0.00 39.77 3.85
1700 6519 1.130561 GCCAGATTACGTGCCTTTGAC 59.869 52.381 0.00 0.00 0.00 3.18
1746 6590 1.075542 TACGCGCCTGAAGATGTTTG 58.924 50.000 5.73 0.00 0.00 2.93
1784 6636 8.084985 TCATGTGTATTTTCCCACTCATACTA 57.915 34.615 0.00 0.00 32.76 1.82
1786 6638 6.238484 GCTCATGTGTATTTTCCCACTCATAC 60.238 42.308 0.00 0.00 32.76 2.39
1787 6639 5.822519 GCTCATGTGTATTTTCCCACTCATA 59.177 40.000 0.00 0.00 32.76 2.15
1788 6640 4.641989 GCTCATGTGTATTTTCCCACTCAT 59.358 41.667 0.00 0.00 32.76 2.90
1789 6641 4.009675 GCTCATGTGTATTTTCCCACTCA 58.990 43.478 0.00 0.00 32.76 3.41
1790 6642 4.265073 AGCTCATGTGTATTTTCCCACTC 58.735 43.478 0.00 0.00 32.76 3.51
1791 6643 4.265073 GAGCTCATGTGTATTTTCCCACT 58.735 43.478 9.40 0.00 32.76 4.00
1792 6644 3.378427 GGAGCTCATGTGTATTTTCCCAC 59.622 47.826 17.19 0.00 0.00 4.61
1793 6645 3.266772 AGGAGCTCATGTGTATTTTCCCA 59.733 43.478 17.19 0.00 0.00 4.37
1794 6646 3.879892 GAGGAGCTCATGTGTATTTTCCC 59.120 47.826 17.19 0.00 0.00 3.97
1795 6647 4.574013 CAGAGGAGCTCATGTGTATTTTCC 59.426 45.833 16.65 0.00 32.06 3.13
1796 6648 4.574013 CCAGAGGAGCTCATGTGTATTTTC 59.426 45.833 22.04 0.00 32.06 2.29
1797 6649 4.018960 ACCAGAGGAGCTCATGTGTATTTT 60.019 41.667 22.04 0.81 32.06 1.82
1798 6650 3.521126 ACCAGAGGAGCTCATGTGTATTT 59.479 43.478 22.04 3.09 32.06 1.40
1799 6651 3.110705 ACCAGAGGAGCTCATGTGTATT 58.889 45.455 22.04 5.41 32.06 1.89
1801 6653 1.827344 CACCAGAGGAGCTCATGTGTA 59.173 52.381 22.04 0.00 33.05 2.90
1803 6655 0.743701 GCACCAGAGGAGCTCATGTG 60.744 60.000 17.81 17.81 36.40 3.21
1804 6656 0.908656 AGCACCAGAGGAGCTCATGT 60.909 55.000 17.19 3.50 45.99 3.21
1805 6657 1.117994 TAGCACCAGAGGAGCTCATG 58.882 55.000 17.19 10.72 45.99 3.07
1806 6658 1.118838 GTAGCACCAGAGGAGCTCAT 58.881 55.000 17.19 8.81 45.99 2.90
1807 6659 0.251787 TGTAGCACCAGAGGAGCTCA 60.252 55.000 17.19 7.24 45.99 4.26
1810 6662 0.390472 GTGTGTAGCACCAGAGGAGC 60.390 60.000 0.00 0.00 42.10 4.70
1811 6663 3.822607 GTGTGTAGCACCAGAGGAG 57.177 57.895 0.00 0.00 42.10 3.69
1819 6671 4.682778 TTCATATAGGGGTGTGTAGCAC 57.317 45.455 0.00 0.00 46.97 4.40
1820 6672 7.568128 AATATTCATATAGGGGTGTGTAGCA 57.432 36.000 0.00 0.00 0.00 3.49
1911 7868 4.738740 CAGTATTTCCTTCGTCACGGATAC 59.261 45.833 0.00 0.00 0.00 2.24
1912 7869 4.400251 ACAGTATTTCCTTCGTCACGGATA 59.600 41.667 0.00 0.00 0.00 2.59
1914 7871 2.559668 ACAGTATTTCCTTCGTCACGGA 59.440 45.455 0.00 0.00 0.00 4.69
1915 7872 2.921754 GACAGTATTTCCTTCGTCACGG 59.078 50.000 0.00 0.00 0.00 4.94
1917 7874 2.921754 CGGACAGTATTTCCTTCGTCAC 59.078 50.000 0.00 0.00 0.00 3.67
1918 7875 2.821378 TCGGACAGTATTTCCTTCGTCA 59.179 45.455 0.00 0.00 0.00 4.35
1919 7876 3.498927 TCGGACAGTATTTCCTTCGTC 57.501 47.619 0.00 0.00 0.00 4.20
1920 7877 3.006110 TGTTCGGACAGTATTTCCTTCGT 59.994 43.478 0.00 0.00 0.00 3.85
1921 7878 3.581755 TGTTCGGACAGTATTTCCTTCG 58.418 45.455 0.00 0.00 0.00 3.79
1922 7879 5.934935 TTTGTTCGGACAGTATTTCCTTC 57.065 39.130 0.00 0.00 37.04 3.46
1924 7881 6.072119 GGATTTTTGTTCGGACAGTATTTCCT 60.072 38.462 0.00 0.00 37.04 3.36
1925 7882 6.090783 GGATTTTTGTTCGGACAGTATTTCC 58.909 40.000 0.00 0.00 37.04 3.13
1927 7884 6.642707 TGGATTTTTGTTCGGACAGTATTT 57.357 33.333 0.00 0.00 37.04 1.40
1929 7886 5.357032 GGATGGATTTTTGTTCGGACAGTAT 59.643 40.000 0.00 0.00 37.04 2.12
1930 7887 4.698304 GGATGGATTTTTGTTCGGACAGTA 59.302 41.667 0.00 0.00 37.04 2.74
1931 7888 3.506067 GGATGGATTTTTGTTCGGACAGT 59.494 43.478 0.00 0.00 37.04 3.55
1933 7890 3.491342 TGGATGGATTTTTGTTCGGACA 58.509 40.909 0.00 0.00 0.00 4.02
1934 7891 4.513198 TTGGATGGATTTTTGTTCGGAC 57.487 40.909 0.00 0.00 0.00 4.79
1935 7892 4.342378 TGTTTGGATGGATTTTTGTTCGGA 59.658 37.500 0.00 0.00 0.00 4.55
1937 7894 5.288804 ACTGTTTGGATGGATTTTTGTTCG 58.711 37.500 0.00 0.00 0.00 3.95
1939 7896 7.936496 AAAACTGTTTGGATGGATTTTTGTT 57.064 28.000 6.53 0.00 0.00 2.83
1940 7897 7.936496 AAAAACTGTTTGGATGGATTTTTGT 57.064 28.000 6.53 0.00 0.00 2.83
1981 8643 6.657541 AGGAAACGTATCTATGGCAAGAAAAA 59.342 34.615 0.00 0.00 0.00 1.94
1986 8648 3.809832 CCAGGAAACGTATCTATGGCAAG 59.190 47.826 0.00 0.00 0.00 4.01
1989 8651 3.470645 ACCAGGAAACGTATCTATGGC 57.529 47.619 0.00 0.00 32.65 4.40
1990 8652 7.931948 AGAAAATACCAGGAAACGTATCTATGG 59.068 37.037 0.00 0.00 34.40 2.74
1991 8653 8.888579 AGAAAATACCAGGAAACGTATCTATG 57.111 34.615 0.00 0.00 0.00 2.23
1992 8654 8.701895 TGAGAAAATACCAGGAAACGTATCTAT 58.298 33.333 0.00 0.00 0.00 1.98
1993 8655 7.977853 GTGAGAAAATACCAGGAAACGTATCTA 59.022 37.037 0.00 0.00 0.00 1.98
1994 8656 6.817140 GTGAGAAAATACCAGGAAACGTATCT 59.183 38.462 0.00 0.00 0.00 1.98
1995 8657 6.237755 CGTGAGAAAATACCAGGAAACGTATC 60.238 42.308 0.00 0.00 0.00 2.24
1996 8658 5.579511 CGTGAGAAAATACCAGGAAACGTAT 59.420 40.000 0.00 0.00 0.00 3.06
1997 8659 4.925054 CGTGAGAAAATACCAGGAAACGTA 59.075 41.667 0.00 0.00 0.00 3.57
1999 8661 3.991773 TCGTGAGAAAATACCAGGAAACG 59.008 43.478 0.00 0.00 37.03 3.60
2020 8682 3.001330 CCCGATCTACTGTGCGAAATTTC 59.999 47.826 8.20 8.20 0.00 2.17
2021 8683 2.936498 CCCGATCTACTGTGCGAAATTT 59.064 45.455 0.00 0.00 0.00 1.82
2022 8684 2.167693 TCCCGATCTACTGTGCGAAATT 59.832 45.455 0.00 0.00 0.00 1.82
2023 8685 1.754803 TCCCGATCTACTGTGCGAAAT 59.245 47.619 0.00 0.00 0.00 2.17
2024 8686 1.135199 GTCCCGATCTACTGTGCGAAA 60.135 52.381 0.00 0.00 0.00 3.46
2025 8687 0.454600 GTCCCGATCTACTGTGCGAA 59.545 55.000 0.00 0.00 0.00 4.70
2026 8688 1.381928 GGTCCCGATCTACTGTGCGA 61.382 60.000 0.00 0.00 0.00 5.10
2027 8689 1.065928 GGTCCCGATCTACTGTGCG 59.934 63.158 0.00 0.00 0.00 5.34
2028 8690 1.442148 GGGTCCCGATCTACTGTGC 59.558 63.158 0.00 0.00 0.00 4.57
2029 8691 0.686441 TGGGGTCCCGATCTACTGTG 60.686 60.000 0.48 0.00 39.42 3.66
2030 8692 0.397254 CTGGGGTCCCGATCTACTGT 60.397 60.000 0.48 0.00 39.42 3.55
2031 8693 1.115930 CCTGGGGTCCCGATCTACTG 61.116 65.000 0.48 0.00 39.42 2.74
2032 8694 1.233369 CCTGGGGTCCCGATCTACT 59.767 63.158 0.48 0.00 39.42 2.57
2033 8695 0.690077 AACCTGGGGTCCCGATCTAC 60.690 60.000 0.48 0.00 39.42 2.59
2034 8696 0.043637 AAACCTGGGGTCCCGATCTA 59.956 55.000 0.48 0.00 39.42 1.98
2035 8697 1.229853 AAACCTGGGGTCCCGATCT 60.230 57.895 0.48 0.00 39.42 2.75
2036 8698 1.077716 CAAACCTGGGGTCCCGATC 60.078 63.158 0.48 0.00 39.42 3.69
2037 8699 2.612493 CCAAACCTGGGGTCCCGAT 61.612 63.158 0.48 0.00 39.30 4.18
2038 8700 3.253838 CCAAACCTGGGGTCCCGA 61.254 66.667 0.48 0.00 39.30 5.14
2041 8703 5.425001 TTTGGATACCAAACCTGGGGTCC 62.425 52.174 11.25 9.10 46.92 4.46
2042 8704 2.225167 TTTGGATACCAAACCTGGGGTC 60.225 50.000 11.25 0.00 46.92 4.46
2043 8705 1.790157 TTTGGATACCAAACCTGGGGT 59.210 47.619 11.25 0.00 46.92 4.95
2044 8706 2.614134 TTTGGATACCAAACCTGGGG 57.386 50.000 11.25 0.00 46.92 4.96
2099 8761 7.830201 ACACCCCTATACGAACATTAAATTCAA 59.170 33.333 0.00 0.00 0.00 2.69
2100 8762 7.281324 CACACCCCTATACGAACATTAAATTCA 59.719 37.037 0.00 0.00 0.00 2.57
2101 8763 7.255001 CCACACCCCTATACGAACATTAAATTC 60.255 40.741 0.00 0.00 0.00 2.17
2102 8764 6.544564 CCACACCCCTATACGAACATTAAATT 59.455 38.462 0.00 0.00 0.00 1.82
2103 8765 6.059484 CCACACCCCTATACGAACATTAAAT 58.941 40.000 0.00 0.00 0.00 1.40
2106 8768 4.288398 TCCACACCCCTATACGAACATTA 58.712 43.478 0.00 0.00 0.00 1.90
2107 8769 3.109151 TCCACACCCCTATACGAACATT 58.891 45.455 0.00 0.00 0.00 2.71
2109 8771 2.104967 CTCCACACCCCTATACGAACA 58.895 52.381 0.00 0.00 0.00 3.18
2110 8772 1.202498 GCTCCACACCCCTATACGAAC 60.202 57.143 0.00 0.00 0.00 3.95
2111 8773 1.117150 GCTCCACACCCCTATACGAA 58.883 55.000 0.00 0.00 0.00 3.85
2112 8774 0.032912 TGCTCCACACCCCTATACGA 60.033 55.000 0.00 0.00 0.00 3.43
2113 8775 1.000955 GATGCTCCACACCCCTATACG 59.999 57.143 0.00 0.00 0.00 3.06
2114 8776 2.330216 AGATGCTCCACACCCCTATAC 58.670 52.381 0.00 0.00 0.00 1.47
2115 8777 2.795291 AGATGCTCCACACCCCTATA 57.205 50.000 0.00 0.00 0.00 1.31
2116 8778 2.614259 CTAGATGCTCCACACCCCTAT 58.386 52.381 0.00 0.00 0.00 2.57
2118 8780 0.692419 CCTAGATGCTCCACACCCCT 60.692 60.000 0.00 0.00 0.00 4.79
2119 8781 0.983378 ACCTAGATGCTCCACACCCC 60.983 60.000 0.00 0.00 0.00 4.95
2120 8782 0.179000 CACCTAGATGCTCCACACCC 59.821 60.000 0.00 0.00 0.00 4.61
2129 8791 3.619038 GCGGATTTATAGCACCTAGATGC 59.381 47.826 0.00 0.00 46.50 3.91
2131 8793 5.482175 AGAAGCGGATTTATAGCACCTAGAT 59.518 40.000 0.00 0.00 0.00 1.98
2132 8794 4.833380 AGAAGCGGATTTATAGCACCTAGA 59.167 41.667 0.00 0.00 0.00 2.43
2133 8795 5.140747 AGAAGCGGATTTATAGCACCTAG 57.859 43.478 0.00 0.00 0.00 3.02
2134 8796 5.773680 ACTAGAAGCGGATTTATAGCACCTA 59.226 40.000 0.00 0.00 0.00 3.08
2135 8797 4.589374 ACTAGAAGCGGATTTATAGCACCT 59.411 41.667 0.00 0.00 0.00 4.00
2136 8798 4.884247 ACTAGAAGCGGATTTATAGCACC 58.116 43.478 0.00 0.00 0.00 5.01
2137 8799 7.313646 TCATACTAGAAGCGGATTTATAGCAC 58.686 38.462 0.00 0.00 0.00 4.40
2138 8800 7.176865 ACTCATACTAGAAGCGGATTTATAGCA 59.823 37.037 0.00 0.00 0.00 3.49
2139 8801 7.486551 CACTCATACTAGAAGCGGATTTATAGC 59.513 40.741 0.00 0.00 0.00 2.97
2140 8802 8.516234 ACACTCATACTAGAAGCGGATTTATAG 58.484 37.037 0.00 0.00 0.00 1.31
2143 8805 6.710597 ACACTCATACTAGAAGCGGATTTA 57.289 37.500 0.00 0.00 0.00 1.40
2146 8808 4.402793 ACAACACTCATACTAGAAGCGGAT 59.597 41.667 0.00 0.00 0.00 4.18
2148 8810 4.111375 ACAACACTCATACTAGAAGCGG 57.889 45.455 0.00 0.00 0.00 5.52
2149 8811 6.467723 AAAACAACACTCATACTAGAAGCG 57.532 37.500 0.00 0.00 0.00 4.68
2170 8832 8.676401 GGTATTTTGCTACTATAACGGGAAAAA 58.324 33.333 0.00 0.00 34.03 1.94
2171 8833 7.282901 GGGTATTTTGCTACTATAACGGGAAAA 59.717 37.037 0.00 0.00 34.60 2.29
2172 8834 6.767423 GGGTATTTTGCTACTATAACGGGAAA 59.233 38.462 0.00 0.00 0.00 3.13
2173 8835 6.126825 TGGGTATTTTGCTACTATAACGGGAA 60.127 38.462 0.00 0.00 0.00 3.97
2175 8837 5.613329 TGGGTATTTTGCTACTATAACGGG 58.387 41.667 0.00 0.00 0.00 5.28
2176 8838 6.293244 GCTTGGGTATTTTGCTACTATAACGG 60.293 42.308 0.00 0.00 0.00 4.44
2177 8839 6.293244 GGCTTGGGTATTTTGCTACTATAACG 60.293 42.308 0.00 0.00 0.00 3.18
2178 8840 6.771267 AGGCTTGGGTATTTTGCTACTATAAC 59.229 38.462 0.00 0.00 0.00 1.89
2179 8841 6.906848 AGGCTTGGGTATTTTGCTACTATAA 58.093 36.000 0.00 0.00 0.00 0.98
2180 8842 6.329197 AGAGGCTTGGGTATTTTGCTACTATA 59.671 38.462 0.00 0.00 0.00 1.31
2182 8844 4.473559 AGAGGCTTGGGTATTTTGCTACTA 59.526 41.667 0.00 0.00 0.00 1.82
2184 8846 3.621558 AGAGGCTTGGGTATTTTGCTAC 58.378 45.455 0.00 0.00 0.00 3.58
2185 8847 5.646692 ATAGAGGCTTGGGTATTTTGCTA 57.353 39.130 0.00 0.00 0.00 3.49
2187 8849 4.038042 GGAATAGAGGCTTGGGTATTTTGC 59.962 45.833 0.00 0.00 0.00 3.68
2188 8850 5.200483 TGGAATAGAGGCTTGGGTATTTTG 58.800 41.667 0.00 0.00 0.00 2.44
2192 8854 3.648545 GTCTGGAATAGAGGCTTGGGTAT 59.351 47.826 0.00 0.00 35.70 2.73
2193 8855 3.039011 GTCTGGAATAGAGGCTTGGGTA 58.961 50.000 0.00 0.00 35.70 3.69
2195 8857 1.839994 TGTCTGGAATAGAGGCTTGGG 59.160 52.381 0.00 0.00 35.70 4.12
2196 8858 3.539604 CTTGTCTGGAATAGAGGCTTGG 58.460 50.000 0.00 0.00 35.70 3.61
2197 8859 3.054802 ACCTTGTCTGGAATAGAGGCTTG 60.055 47.826 0.00 0.00 35.70 4.01
2199 8861 2.839228 ACCTTGTCTGGAATAGAGGCT 58.161 47.619 0.00 0.00 35.70 4.58
2200 8862 3.636153 AACCTTGTCTGGAATAGAGGC 57.364 47.619 0.00 0.00 35.70 4.70
2202 8864 5.474876 AGCAAAAACCTTGTCTGGAATAGAG 59.525 40.000 0.00 0.00 35.70 2.43
2203 8865 5.385198 AGCAAAAACCTTGTCTGGAATAGA 58.615 37.500 0.00 0.00 0.00 1.98
2204 8866 5.474876 AGAGCAAAAACCTTGTCTGGAATAG 59.525 40.000 0.00 0.00 0.00 1.73
2205 8867 5.385198 AGAGCAAAAACCTTGTCTGGAATA 58.615 37.500 0.00 0.00 0.00 1.75
2206 8868 4.218312 AGAGCAAAAACCTTGTCTGGAAT 58.782 39.130 0.00 0.00 0.00 3.01
2207 8869 3.631250 AGAGCAAAAACCTTGTCTGGAA 58.369 40.909 0.00 0.00 0.00 3.53
2208 8870 3.297134 AGAGCAAAAACCTTGTCTGGA 57.703 42.857 0.00 0.00 0.00 3.86
2210 8872 6.566197 ATCTTAGAGCAAAAACCTTGTCTG 57.434 37.500 0.00 0.00 0.00 3.51
2211 8873 8.691661 TTAATCTTAGAGCAAAAACCTTGTCT 57.308 30.769 0.00 0.00 0.00 3.41
2212 8874 9.181805 GTTTAATCTTAGAGCAAAAACCTTGTC 57.818 33.333 0.00 0.00 0.00 3.18
2213 8875 8.141909 GGTTTAATCTTAGAGCAAAAACCTTGT 58.858 33.333 16.43 0.00 40.62 3.16
2214 8876 8.141268 TGGTTTAATCTTAGAGCAAAAACCTTG 58.859 33.333 20.64 0.00 42.98 3.61
2215 8877 8.141909 GTGGTTTAATCTTAGAGCAAAAACCTT 58.858 33.333 20.64 0.31 42.98 3.50
2216 8878 7.505923 AGTGGTTTAATCTTAGAGCAAAAACCT 59.494 33.333 20.64 8.21 42.98 3.50
2218 8880 8.968242 CAAGTGGTTTAATCTTAGAGCAAAAAC 58.032 33.333 0.00 0.00 28.95 2.43
2219 8881 8.691797 ACAAGTGGTTTAATCTTAGAGCAAAAA 58.308 29.630 0.00 0.00 28.95 1.94
2220 8882 8.134895 CACAAGTGGTTTAATCTTAGAGCAAAA 58.865 33.333 0.00 0.00 28.95 2.44
2222 8884 6.770785 ACACAAGTGGTTTAATCTTAGAGCAA 59.229 34.615 5.08 0.00 34.19 3.91
2223 8885 6.204688 CACACAAGTGGTTTAATCTTAGAGCA 59.795 38.462 5.08 0.00 42.13 4.26
2226 8888 8.740123 TTTCACACAAGTGGTTTAATCTTAGA 57.260 30.769 5.08 0.00 45.91 2.10
2227 8889 8.621286 ACTTTCACACAAGTGGTTTAATCTTAG 58.379 33.333 5.08 0.00 45.91 2.18
2228 8890 8.402472 CACTTTCACACAAGTGGTTTAATCTTA 58.598 33.333 5.08 0.00 46.84 2.10
2229 8891 7.257722 CACTTTCACACAAGTGGTTTAATCTT 58.742 34.615 5.08 0.00 46.84 2.40
2230 8892 6.795399 CACTTTCACACAAGTGGTTTAATCT 58.205 36.000 5.08 0.00 46.84 2.40
2240 8902 2.799126 TGGGTCACTTTCACACAAGT 57.201 45.000 0.00 0.00 37.49 3.16
2241 8903 2.294233 CCATGGGTCACTTTCACACAAG 59.706 50.000 2.85 0.00 28.77 3.16
2242 8904 2.305928 CCATGGGTCACTTTCACACAA 58.694 47.619 2.85 0.00 28.77 3.33
2245 8907 1.492599 TCACCATGGGTCACTTTCACA 59.507 47.619 18.09 0.00 31.02 3.58
2246 8908 2.270352 TCACCATGGGTCACTTTCAC 57.730 50.000 18.09 0.00 31.02 3.18
2251 8913 2.158475 ACACAATTCACCATGGGTCACT 60.158 45.455 18.09 0.00 31.02 3.41
2252 8914 2.238521 ACACAATTCACCATGGGTCAC 58.761 47.619 18.09 0.00 31.02 3.67
2253 8915 2.673775 ACACAATTCACCATGGGTCA 57.326 45.000 18.09 0.00 31.02 4.02
2254 8916 3.417101 TGTACACAATTCACCATGGGTC 58.583 45.455 18.09 0.00 34.42 4.46
2255 8917 3.517296 TGTACACAATTCACCATGGGT 57.483 42.857 18.09 3.88 36.97 4.51
2256 8918 4.015764 TCATGTACACAATTCACCATGGG 58.984 43.478 18.09 5.22 32.56 4.00
2258 8920 5.625921 TGTCATGTACACAATTCACCATG 57.374 39.130 0.00 0.00 31.43 3.66
2259 8921 5.711506 ACATGTCATGTACACAATTCACCAT 59.288 36.000 16.99 0.00 42.78 3.55
2260 8922 5.048852 CACATGTCATGTACACAATTCACCA 60.049 40.000 18.00 0.00 42.70 4.17
2261 8923 5.393124 CACATGTCATGTACACAATTCACC 58.607 41.667 18.00 0.00 42.70 4.02
2262 8924 4.853196 GCACATGTCATGTACACAATTCAC 59.147 41.667 18.00 0.00 42.70 3.18
2263 8925 4.761227 AGCACATGTCATGTACACAATTCA 59.239 37.500 18.00 0.00 42.70 2.57
2264 8926 5.300969 AGCACATGTCATGTACACAATTC 57.699 39.130 18.00 1.55 42.70 2.17
2265 8927 7.395190 AATAGCACATGTCATGTACACAATT 57.605 32.000 18.00 10.69 42.70 2.32
2266 8928 8.681486 ATAATAGCACATGTCATGTACACAAT 57.319 30.769 18.00 5.69 42.70 2.71
2268 8930 8.504812 AAATAATAGCACATGTCATGTACACA 57.495 30.769 18.00 5.67 42.70 3.72
2269 8931 9.225201 CAAAATAATAGCACATGTCATGTACAC 57.775 33.333 18.00 10.71 42.70 2.90
2270 8932 8.404765 CCAAAATAATAGCACATGTCATGTACA 58.595 33.333 18.00 0.00 42.70 2.90
2272 8934 8.518430 ACCAAAATAATAGCACATGTCATGTA 57.482 30.769 18.00 3.78 42.70 2.29
2273 8935 7.408756 ACCAAAATAATAGCACATGTCATGT 57.591 32.000 12.87 12.87 46.22 3.21
2274 8936 9.800433 TTTACCAAAATAATAGCACATGTCATG 57.200 29.630 11.41 11.41 0.00 3.07
2276 8938 9.800433 CATTTACCAAAATAATAGCACATGTCA 57.200 29.630 0.00 0.00 33.45 3.58
2277 8939 9.248291 CCATTTACCAAAATAATAGCACATGTC 57.752 33.333 0.00 0.00 33.45 3.06
2278 8940 7.710475 GCCATTTACCAAAATAATAGCACATGT 59.290 33.333 0.00 0.00 33.45 3.21
2280 8942 7.927629 CAGCCATTTACCAAAATAATAGCACAT 59.072 33.333 0.00 0.00 33.45 3.21
2281 8943 7.093552 ACAGCCATTTACCAAAATAATAGCACA 60.094 33.333 0.00 0.00 33.45 4.57
2283 8945 7.093552 ACACAGCCATTTACCAAAATAATAGCA 60.094 33.333 0.00 0.00 33.45 3.49
2284 8946 7.264947 ACACAGCCATTTACCAAAATAATAGC 58.735 34.615 0.00 0.00 33.45 2.97
2285 8947 9.950680 CTACACAGCCATTTACCAAAATAATAG 57.049 33.333 0.00 0.00 33.45 1.73
2288 8950 6.948886 TCCTACACAGCCATTTACCAAAATAA 59.051 34.615 0.00 0.00 33.45 1.40
2289 8951 6.486056 TCCTACACAGCCATTTACCAAAATA 58.514 36.000 0.00 0.00 33.45 1.40
2290 8952 5.329399 TCCTACACAGCCATTTACCAAAAT 58.671 37.500 0.00 0.00 35.65 1.82
2291 8953 4.730966 TCCTACACAGCCATTTACCAAAA 58.269 39.130 0.00 0.00 0.00 2.44
2292 8954 4.374689 TCCTACACAGCCATTTACCAAA 57.625 40.909 0.00 0.00 0.00 3.28
2293 8955 4.374689 TTCCTACACAGCCATTTACCAA 57.625 40.909 0.00 0.00 0.00 3.67
2294 8956 4.269183 CATTCCTACACAGCCATTTACCA 58.731 43.478 0.00 0.00 0.00 3.25
2297 8959 3.961849 TGCATTCCTACACAGCCATTTA 58.038 40.909 0.00 0.00 0.00 1.40
2298 8960 2.806434 TGCATTCCTACACAGCCATTT 58.194 42.857 0.00 0.00 0.00 2.32
2300 8962 2.304092 CATGCATTCCTACACAGCCAT 58.696 47.619 0.00 0.00 0.00 4.40
2301 8963 1.682702 CCATGCATTCCTACACAGCCA 60.683 52.381 0.00 0.00 0.00 4.75
2303 8965 1.402968 CACCATGCATTCCTACACAGC 59.597 52.381 0.00 0.00 0.00 4.40
2304 8966 2.421073 CACACCATGCATTCCTACACAG 59.579 50.000 0.00 0.00 0.00 3.66
2305 8967 2.435422 CACACCATGCATTCCTACACA 58.565 47.619 0.00 0.00 0.00 3.72
2317 8979 1.955778 TCAAAACCTGAGCACACCATG 59.044 47.619 0.00 0.00 0.00 3.66
2318 8980 2.363306 TCAAAACCTGAGCACACCAT 57.637 45.000 0.00 0.00 0.00 3.55
2320 8982 3.068024 TGAAATCAAAACCTGAGCACACC 59.932 43.478 0.00 0.00 37.52 4.16
2321 8983 4.305989 TGAAATCAAAACCTGAGCACAC 57.694 40.909 0.00 0.00 37.52 3.82
2322 8984 4.998671 TTGAAATCAAAACCTGAGCACA 57.001 36.364 0.00 0.00 37.52 4.57
2347 9009 3.290308 ACTTGCACACACGTTCAAAAA 57.710 38.095 0.00 0.00 27.58 1.94
2348 9010 2.983136 CAACTTGCACACACGTTCAAAA 59.017 40.909 0.00 0.00 36.22 2.44
2350 9012 1.537638 ACAACTTGCACACACGTTCAA 59.462 42.857 0.00 0.00 36.22 2.69
2352 9014 1.135803 ACACAACTTGCACACACGTTC 60.136 47.619 0.00 0.00 36.22 3.95
2353 9015 0.878416 ACACAACTTGCACACACGTT 59.122 45.000 0.00 0.00 38.69 3.99
2354 9016 0.878416 AACACAACTTGCACACACGT 59.122 45.000 0.00 0.00 0.00 4.49
2355 9017 1.258427 CAACACAACTTGCACACACG 58.742 50.000 0.00 0.00 0.00 4.49
2356 9018 1.067915 ACCAACACAACTTGCACACAC 60.068 47.619 0.00 0.00 0.00 3.82
2357 9019 1.252175 ACCAACACAACTTGCACACA 58.748 45.000 0.00 0.00 0.00 3.72
2359 9021 1.067283 CCAACCAACACAACTTGCACA 60.067 47.619 0.00 0.00 0.00 4.57
2360 9022 1.067213 ACCAACCAACACAACTTGCAC 60.067 47.619 0.00 0.00 0.00 4.57
2361 9023 1.261480 ACCAACCAACACAACTTGCA 58.739 45.000 0.00 0.00 0.00 4.08
2362 9024 2.378445 AACCAACCAACACAACTTGC 57.622 45.000 0.00 0.00 0.00 4.01
2363 9025 3.862845 GCTAAACCAACCAACACAACTTG 59.137 43.478 0.00 0.00 0.00 3.16
2364 9026 3.511934 TGCTAAACCAACCAACACAACTT 59.488 39.130 0.00 0.00 0.00 2.66
2365 9027 3.093057 TGCTAAACCAACCAACACAACT 58.907 40.909 0.00 0.00 0.00 3.16
2367 9029 4.744795 AATGCTAAACCAACCAACACAA 57.255 36.364 0.00 0.00 0.00 3.33
2396 9058 0.385029 TCACAAACTGGTGCATGCAC 59.615 50.000 37.29 37.29 45.49 4.57
2397 9059 1.330234 ATCACAAACTGGTGCATGCA 58.670 45.000 18.46 18.46 38.66 3.96
2398 9060 2.159338 CCTATCACAAACTGGTGCATGC 60.159 50.000 11.82 11.82 38.66 4.06
2399 9061 2.159338 GCCTATCACAAACTGGTGCATG 60.159 50.000 0.00 0.00 38.66 4.06
2400 9062 2.094675 GCCTATCACAAACTGGTGCAT 58.905 47.619 0.00 0.00 38.66 3.96
2401 9063 1.073763 AGCCTATCACAAACTGGTGCA 59.926 47.619 0.00 0.00 38.66 4.57
2402 9064 1.740025 GAGCCTATCACAAACTGGTGC 59.260 52.381 0.00 0.00 38.66 5.01
2403 9065 2.359900 GGAGCCTATCACAAACTGGTG 58.640 52.381 0.00 0.00 40.16 4.17
2405 9067 1.743772 CGGGAGCCTATCACAAACTGG 60.744 57.143 0.00 0.00 0.00 4.00
2407 9069 1.276622 ACGGGAGCCTATCACAAACT 58.723 50.000 0.00 0.00 0.00 2.66
2408 9070 2.109425 AACGGGAGCCTATCACAAAC 57.891 50.000 0.00 0.00 0.00 2.93
2409 9071 2.304761 AGAAACGGGAGCCTATCACAAA 59.695 45.455 0.00 0.00 0.00 2.83
2411 9073 1.480954 GAGAAACGGGAGCCTATCACA 59.519 52.381 0.00 0.00 0.00 3.58
2412 9074 1.202545 GGAGAAACGGGAGCCTATCAC 60.203 57.143 0.00 0.00 0.00 3.06
2413 9075 1.120530 GGAGAAACGGGAGCCTATCA 58.879 55.000 0.00 0.00 0.00 2.15
2414 9076 0.393448 GGGAGAAACGGGAGCCTATC 59.607 60.000 0.00 0.00 0.00 2.08
2415 9077 0.031010 AGGGAGAAACGGGAGCCTAT 60.031 55.000 0.00 0.00 0.00 2.57
2417 9079 1.990614 GAGGGAGAAACGGGAGCCT 60.991 63.158 0.00 0.00 0.00 4.58
2418 9080 1.962321 GAGAGGGAGAAACGGGAGCC 61.962 65.000 0.00 0.00 0.00 4.70
2419 9081 1.258445 TGAGAGGGAGAAACGGGAGC 61.258 60.000 0.00 0.00 0.00 4.70
2420 9082 1.267121 TTGAGAGGGAGAAACGGGAG 58.733 55.000 0.00 0.00 0.00 4.30
2424 9086 4.393371 GGAGAAAATTGAGAGGGAGAAACG 59.607 45.833 0.00 0.00 0.00 3.60
2425 9087 4.393371 CGGAGAAAATTGAGAGGGAGAAAC 59.607 45.833 0.00 0.00 0.00 2.78
2426 9088 4.579869 CGGAGAAAATTGAGAGGGAGAAA 58.420 43.478 0.00 0.00 0.00 2.52
2427 9089 3.619979 GCGGAGAAAATTGAGAGGGAGAA 60.620 47.826 0.00 0.00 0.00 2.87
2428 9090 2.093447 GCGGAGAAAATTGAGAGGGAGA 60.093 50.000 0.00 0.00 0.00 3.71
2430 9092 1.405526 CGCGGAGAAAATTGAGAGGGA 60.406 52.381 0.00 0.00 0.00 4.20
2431 9093 1.009829 CGCGGAGAAAATTGAGAGGG 58.990 55.000 0.00 0.00 0.00 4.30
2432 9094 1.394917 CACGCGGAGAAAATTGAGAGG 59.605 52.381 12.47 0.00 0.00 3.69
2433 9095 2.069273 ACACGCGGAGAAAATTGAGAG 58.931 47.619 12.47 0.00 0.00 3.20
2434 9096 2.066262 GACACGCGGAGAAAATTGAGA 58.934 47.619 12.47 0.00 0.00 3.27
2437 9129 0.168128 GGGACACGCGGAGAAAATTG 59.832 55.000 12.47 0.00 0.00 2.32
2447 9139 2.259875 GACAGAGAGAGGGACACGCG 62.260 65.000 3.53 3.53 0.00 6.01
2448 9140 1.244697 TGACAGAGAGAGGGACACGC 61.245 60.000 0.00 0.00 0.00 5.34
2449 9141 1.248486 TTGACAGAGAGAGGGACACG 58.752 55.000 0.00 0.00 0.00 4.49
2450 9142 2.028567 CCTTTGACAGAGAGAGGGACAC 60.029 54.545 0.00 0.00 0.00 3.67
2453 9145 1.203237 AGCCTTTGACAGAGAGAGGGA 60.203 52.381 0.00 0.00 0.00 4.20
2455 9147 1.135141 CGAGCCTTTGACAGAGAGAGG 60.135 57.143 0.00 0.00 0.00 3.69
2456 9148 1.735369 GCGAGCCTTTGACAGAGAGAG 60.735 57.143 0.00 0.00 0.00 3.20
2458 9150 0.739112 GGCGAGCCTTTGACAGAGAG 60.739 60.000 6.90 0.00 0.00 3.20
2461 9153 1.004560 CTGGCGAGCCTTTGACAGA 60.005 57.895 15.75 0.00 45.51 3.41
2465 9157 3.272364 ATGCCTGGCGAGCCTTTGA 62.272 57.895 14.98 0.00 36.94 2.69
2489 9181 2.040544 CGGTGGATGTGGAGCAACC 61.041 63.158 0.00 0.00 40.12 3.77
2490 9182 2.690778 GCGGTGGATGTGGAGCAAC 61.691 63.158 0.00 0.00 0.00 4.17
2491 9183 2.359850 GCGGTGGATGTGGAGCAA 60.360 61.111 0.00 0.00 0.00 3.91
2493 9185 2.512515 GAGCGGTGGATGTGGAGC 60.513 66.667 0.00 0.00 0.00 4.70
2494 9186 1.448540 GTGAGCGGTGGATGTGGAG 60.449 63.158 0.00 0.00 0.00 3.86
2495 9187 2.662596 GTGAGCGGTGGATGTGGA 59.337 61.111 0.00 0.00 0.00 4.02
2496 9188 2.436646 GGTGAGCGGTGGATGTGG 60.437 66.667 0.00 0.00 0.00 4.17
2497 9189 2.815211 CGGTGAGCGGTGGATGTG 60.815 66.667 0.00 0.00 0.00 3.21
2498 9190 4.760047 GCGGTGAGCGGTGGATGT 62.760 66.667 6.08 0.00 35.41 3.06
2515 9207 4.170062 CGGCGGCATGCTGTTGAG 62.170 66.667 26.79 12.36 45.38 3.02
2531 9223 4.849329 GACTACGGCGGTGGAGCG 62.849 72.222 13.24 0.00 38.18 5.03
2533 9225 4.849329 GCGACTACGGCGGTGGAG 62.849 72.222 13.24 5.30 40.15 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.