Multiple sequence alignment - TraesCS6A01G330500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G330500 chr6A 100.000 2708 0 0 1 2708 563025250 563027957 0.000000e+00 5001.0
1 TraesCS6A01G330500 chr6A 94.779 249 13 0 2405 2653 470142272 470142520 3.270000e-104 388.0
2 TraesCS6A01G330500 chr6A 94.737 247 13 0 2405 2651 31012815 31012569 4.230000e-103 385.0
3 TraesCS6A01G330500 chr6A 100.000 127 0 0 2090 2216 599910815 599910941 4.510000e-58 235.0
4 TraesCS6A01G330500 chr6A 91.489 47 3 1 2361 2406 470142238 470142284 2.250000e-06 63.9
5 TraesCS6A01G330500 chr6D 93.033 1507 67 21 599 2091 420003554 420005036 0.000000e+00 2167.0
6 TraesCS6A01G330500 chr6D 88.306 248 12 5 4 237 420002692 420002936 5.710000e-72 281.0
7 TraesCS6A01G330500 chr6D 91.613 155 13 0 2215 2369 420005035 420005189 5.870000e-52 215.0
8 TraesCS6A01G330500 chr6B 93.379 1465 41 25 663 2091 632954458 632955902 0.000000e+00 2117.0
9 TraesCS6A01G330500 chr6B 87.983 233 13 4 1 219 632953792 632954023 7.440000e-66 261.0
10 TraesCS6A01G330500 chr6B 96.753 154 5 0 2213 2366 632955902 632956055 9.620000e-65 257.0
11 TraesCS6A01G330500 chr6B 91.379 116 9 1 212 326 182748462 182748577 1.000000e-34 158.0
12 TraesCS6A01G330500 chr6B 88.710 124 14 0 214 337 679639504 679639381 4.670000e-33 152.0
13 TraesCS6A01G330500 chr7A 95.984 249 9 1 2405 2653 403934079 403934326 1.170000e-108 403.0
14 TraesCS6A01G330500 chr7A 95.142 247 12 0 2405 2651 80986634 80986880 9.090000e-105 390.0
15 TraesCS6A01G330500 chr7A 94.737 247 13 0 2405 2651 641021744 641021990 4.230000e-103 385.0
16 TraesCS6A01G330500 chr7A 97.727 132 3 0 2090 2221 501074801 501074670 7.540000e-56 228.0
17 TraesCS6A01G330500 chr7A 95.620 137 6 0 2087 2223 158665093 158665229 1.260000e-53 220.0
18 TraesCS6A01G330500 chr7A 92.537 67 4 1 2007 2072 126034408 126034342 7.980000e-16 95.3
19 TraesCS6A01G330500 chr5A 95.181 249 12 0 2405 2653 372645310 372645062 7.030000e-106 394.0
20 TraesCS6A01G330500 chr5A 87.903 248 18 2 2363 2609 602443380 602443144 5.710000e-72 281.0
21 TraesCS6A01G330500 chr5A 100.000 127 0 0 2090 2216 77084890 77084764 4.510000e-58 235.0
22 TraesCS6A01G330500 chr5A 96.324 136 5 0 2081 2216 6288390 6288525 9.760000e-55 224.0
23 TraesCS6A01G330500 chr5A 92.035 113 9 0 214 326 302298040 302297928 2.790000e-35 159.0
24 TraesCS6A01G330500 chr3A 94.737 247 13 0 2405 2651 474958361 474958115 4.230000e-103 385.0
25 TraesCS6A01G330500 chr3A 93.333 255 17 0 2405 2659 745374401 745374147 7.080000e-101 377.0
26 TraesCS6A01G330500 chr3A 83.849 291 40 6 2365 2653 60525622 60525907 1.240000e-68 270.0
27 TraesCS6A01G330500 chr3A 95.714 140 3 3 2080 2216 38671388 38671249 3.510000e-54 222.0
28 TraesCS6A01G330500 chr3A 96.269 134 5 0 2090 2223 182639705 182639572 1.260000e-53 220.0
29 TraesCS6A01G330500 chr7D 93.625 251 15 1 2405 2655 603604611 603604362 9.160000e-100 374.0
30 TraesCS6A01G330500 chr7D 88.119 101 9 1 1548 1648 123146767 123146864 1.700000e-22 117.0
31 TraesCS6A01G330500 chr7D 94.030 67 3 1 2007 2072 123147074 123147140 1.720000e-17 100.0
32 TraesCS6A01G330500 chr4B 86.161 224 21 9 1065 1279 455615779 455616001 1.620000e-57 233.0
33 TraesCS6A01G330500 chr4B 81.570 293 40 5 2361 2651 36885148 36885428 2.100000e-56 230.0
34 TraesCS6A01G330500 chr4A 86.574 216 24 5 1105 1319 93898293 93898082 1.620000e-57 233.0
35 TraesCS6A01G330500 chr4A 81.017 295 42 6 2359 2651 99449157 99449439 3.510000e-54 222.0
36 TraesCS6A01G330500 chr4A 92.035 113 9 0 217 329 274942741 274942629 2.790000e-35 159.0
37 TraesCS6A01G330500 chr2A 98.462 130 2 0 2087 2216 693290314 693290443 2.100000e-56 230.0
38 TraesCS6A01G330500 chr2A 97.727 132 3 0 2085 2216 36139460 36139591 7.540000e-56 228.0
39 TraesCS6A01G330500 chr4D 89.444 180 16 3 1105 1283 370530710 370530887 9.760000e-55 224.0
40 TraesCS6A01G330500 chr1A 78.966 290 38 10 2365 2653 465223462 465223195 2.770000e-40 176.0
41 TraesCS6A01G330500 chr1A 90.000 120 10 2 209 326 502769469 502769350 1.300000e-33 154.0
42 TraesCS6A01G330500 chr5D 91.667 120 9 1 211 329 429295464 429295345 6.000000e-37 165.0
43 TraesCS6A01G330500 chr5D 89.431 123 11 1 219 339 562099909 562099787 1.300000e-33 154.0
44 TraesCS6A01G330500 chr5D 74.576 295 57 15 2365 2653 337697775 337697493 2.200000e-21 113.0
45 TraesCS6A01G330500 chr5D 92.593 54 4 0 2405 2458 371284540 371284593 8.040000e-11 78.7
46 TraesCS6A01G330500 chr3B 91.379 116 8 2 212 326 354378502 354378616 1.000000e-34 158.0
47 TraesCS6A01G330500 chr1D 88.710 124 14 0 219 342 447959571 447959448 4.670000e-33 152.0
48 TraesCS6A01G330500 chr7B 91.489 94 5 1 1548 1641 84221105 84221195 2.830000e-25 126.0
49 TraesCS6A01G330500 chr7B 94.030 67 3 1 2007 2072 84221417 84221483 1.720000e-17 100.0
50 TraesCS6A01G330500 chr5B 78.804 184 27 6 2361 2543 501465481 501465653 2.200000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G330500 chr6A 563025250 563027957 2707 False 5001.000000 5001 100.000 1 2708 1 chr6A.!!$F1 2707
1 TraesCS6A01G330500 chr6D 420002692 420005189 2497 False 887.666667 2167 90.984 4 2369 3 chr6D.!!$F1 2365
2 TraesCS6A01G330500 chr6B 632953792 632956055 2263 False 878.333333 2117 92.705 1 2366 3 chr6B.!!$F2 2365

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
909 1239 0.179176 CTCTTCACACTCTCCTCGCG 60.179 60.0 0.0 0.0 0.0 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2199 2575 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.0 0.0 0.0 0.0 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 31 4.679373 ATCCCTCACTTGTATAGCTGTG 57.321 45.455 0.00 0.00 0.00 3.66
32 34 2.932614 CCTCACTTGTATAGCTGTGCAC 59.067 50.000 10.75 10.75 0.00 4.57
38 40 1.405463 TGTATAGCTGTGCACCTCGAG 59.595 52.381 15.69 5.13 0.00 4.04
61 63 3.928727 AATGATTTATGCCCAGCGATG 57.071 42.857 0.00 0.00 0.00 3.84
70 72 1.811266 CCCAGCGATGACCGAACAG 60.811 63.158 0.06 0.00 41.76 3.16
213 228 1.624487 CTGACATGCTGCGTACGTAA 58.376 50.000 17.90 4.85 0.00 3.18
214 229 2.193447 CTGACATGCTGCGTACGTAAT 58.807 47.619 17.90 0.45 0.00 1.89
231 246 6.749923 ACGTAATATATACTCCCTCCGTTC 57.250 41.667 0.00 0.00 0.00 3.95
232 247 6.479884 ACGTAATATATACTCCCTCCGTTCT 58.520 40.000 0.00 0.00 0.00 3.01
233 248 7.624549 ACGTAATATATACTCCCTCCGTTCTA 58.375 38.462 0.00 0.00 0.00 2.10
240 255 8.953223 ATATACTCCCTCCGTTCTAAATTACT 57.047 34.615 0.00 0.00 0.00 2.24
241 256 5.595257 ACTCCCTCCGTTCTAAATTACTC 57.405 43.478 0.00 0.00 0.00 2.59
245 260 4.142315 CCCTCCGTTCTAAATTACTCGTCA 60.142 45.833 0.00 0.00 0.00 4.35
246 261 4.797349 CCTCCGTTCTAAATTACTCGTCAC 59.203 45.833 0.00 0.00 0.00 3.67
247 262 5.375417 TCCGTTCTAAATTACTCGTCACA 57.625 39.130 0.00 0.00 0.00 3.58
251 266 7.224362 TCCGTTCTAAATTACTCGTCACAAAAA 59.776 33.333 0.00 0.00 0.00 1.94
252 267 8.013378 CCGTTCTAAATTACTCGTCACAAAAAT 58.987 33.333 0.00 0.00 0.00 1.82
297 312 8.809468 ATACATCTAGATACATCCATACGTGT 57.191 34.615 4.54 0.00 0.00 4.49
299 314 6.715264 ACATCTAGATACATCCATACGTGTGA 59.285 38.462 14.51 0.00 0.00 3.58
300 315 6.555812 TCTAGATACATCCATACGTGTGAC 57.444 41.667 14.51 0.00 0.00 3.67
301 316 6.059484 TCTAGATACATCCATACGTGTGACA 58.941 40.000 14.51 0.00 0.00 3.58
302 317 5.592104 AGATACATCCATACGTGTGACAA 57.408 39.130 14.51 0.00 0.00 3.18
303 318 5.972935 AGATACATCCATACGTGTGACAAA 58.027 37.500 14.51 0.00 0.00 2.83
304 319 6.582636 AGATACATCCATACGTGTGACAAAT 58.417 36.000 14.51 0.78 0.00 2.32
305 320 7.722363 AGATACATCCATACGTGTGACAAATA 58.278 34.615 14.51 0.38 0.00 1.40
306 321 8.201464 AGATACATCCATACGTGTGACAAATAA 58.799 33.333 14.51 0.00 0.00 1.40
307 322 8.902540 ATACATCCATACGTGTGACAAATAAT 57.097 30.769 14.51 0.00 0.00 1.28
308 323 7.624360 ACATCCATACGTGTGACAAATAATT 57.376 32.000 14.51 0.00 0.00 1.40
310 325 6.339194 TCCATACGTGTGACAAATAATTCG 57.661 37.500 14.51 0.00 0.00 3.34
311 326 6.100668 TCCATACGTGTGACAAATAATTCGA 58.899 36.000 14.51 0.00 0.00 3.71
316 385 5.050904 ACGTGTGACAAATAATTCGAAACGA 60.051 36.000 15.05 0.00 0.00 3.85
342 411 3.798202 AGTAGGATCGAATTTGCAGGAC 58.202 45.455 0.00 0.00 0.00 3.85
389 458 1.689813 TCCGTTAGTGTTTCCTCTGCA 59.310 47.619 0.00 0.00 0.00 4.41
439 508 5.480205 TGGGGTGTACAAAACAAAAGAAAC 58.520 37.500 0.00 0.00 40.63 2.78
440 509 5.011738 TGGGGTGTACAAAACAAAAGAAACA 59.988 36.000 0.00 0.00 40.63 2.83
441 510 5.349270 GGGGTGTACAAAACAAAAGAAACAC 59.651 40.000 0.00 0.00 40.63 3.32
443 512 6.128769 GGGTGTACAAAACAAAAGAAACACAC 60.129 38.462 0.00 0.00 40.63 3.82
445 514 7.277917 GTGTACAAAACAAAAGAAACACACAC 58.722 34.615 0.00 0.00 40.63 3.82
446 515 6.978659 TGTACAAAACAAAAGAAACACACACA 59.021 30.769 0.00 0.00 34.29 3.72
447 516 6.280537 ACAAAACAAAAGAAACACACACAC 57.719 33.333 0.00 0.00 0.00 3.82
455 528 1.400494 GAAACACACACACACACCCTC 59.600 52.381 0.00 0.00 0.00 4.30
505 582 4.911514 TGTTTAAAAACAGAGGTGCTCC 57.088 40.909 4.19 0.00 43.45 4.70
506 583 4.274147 TGTTTAAAAACAGAGGTGCTCCA 58.726 39.130 7.70 0.00 43.45 3.86
508 585 5.009610 TGTTTAAAAACAGAGGTGCTCCATC 59.990 40.000 7.70 2.16 43.45 3.51
510 587 1.067295 AAACAGAGGTGCTCCATCCA 58.933 50.000 7.70 0.00 35.89 3.41
515 604 3.209410 CAGAGGTGCTCCATCCAAATAC 58.791 50.000 7.70 0.00 35.89 1.89
525 614 5.621197 TCCATCCAAATACAAGACGTTTG 57.379 39.130 0.00 0.00 33.72 2.93
551 738 8.545420 GTCTTAAACGTCTTACATTTTGAGACA 58.455 33.333 10.58 0.00 41.09 3.41
554 741 7.548196 AAACGTCTTACATTTTGAGACAGAA 57.452 32.000 0.00 0.00 39.74 3.02
555 742 7.548196 AACGTCTTACATTTTGAGACAGAAA 57.452 32.000 0.00 0.00 39.74 2.52
556 743 7.548196 ACGTCTTACATTTTGAGACAGAAAA 57.452 32.000 0.00 0.00 39.74 2.29
596 886 9.710979 CGTCTTACATTTTAAAACAAACAGAGA 57.289 29.630 1.97 0.00 0.00 3.10
610 909 9.434420 AAACAAACAGAGAATGTCAAAAATTGA 57.566 25.926 0.00 0.00 43.00 2.57
630 929 5.389859 TGACTTGCATTTTAAGACATGGG 57.610 39.130 0.00 0.00 0.00 4.00
636 935 5.192927 TGCATTTTAAGACATGGGGAGTAG 58.807 41.667 0.00 0.00 0.00 2.57
645 944 4.159879 AGACATGGGGAGTAGTTAGAAACG 59.840 45.833 0.00 0.00 36.23 3.60
653 952 4.142425 GGAGTAGTTAGAAACGGAGGTCTG 60.142 50.000 0.00 0.00 36.23 3.51
657 956 1.263356 TAGAAACGGAGGTCTGGTGG 58.737 55.000 0.00 0.00 0.00 4.61
659 958 0.602905 GAAACGGAGGTCTGGTGGTG 60.603 60.000 0.00 0.00 0.00 4.17
660 959 2.676163 AAACGGAGGTCTGGTGGTGC 62.676 60.000 0.00 0.00 0.00 5.01
661 960 4.394712 CGGAGGTCTGGTGGTGCC 62.395 72.222 0.00 0.00 37.90 5.01
692 1020 1.062525 GCGTGATGTGGGCGAAATC 59.937 57.895 0.00 0.00 0.00 2.17
708 1036 5.001819 GGCGAAATCGTTTTATACAAACACG 59.998 40.000 4.59 0.00 42.22 4.49
768 1098 1.620822 AGCAGAAATGGCCGAGTTTT 58.379 45.000 0.00 0.00 0.00 2.43
770 1100 3.153919 AGCAGAAATGGCCGAGTTTTTA 58.846 40.909 0.00 0.00 0.00 1.52
894 1224 1.131638 TCAACCTGCACTGGTCTCTT 58.868 50.000 0.00 0.00 39.83 2.85
903 1233 2.609244 GCACTGGTCTCTTCACACTCTC 60.609 54.545 0.00 0.00 0.00 3.20
904 1234 2.029470 CACTGGTCTCTTCACACTCTCC 60.029 54.545 0.00 0.00 0.00 3.71
905 1235 2.158385 ACTGGTCTCTTCACACTCTCCT 60.158 50.000 0.00 0.00 0.00 3.69
906 1236 2.491693 CTGGTCTCTTCACACTCTCCTC 59.508 54.545 0.00 0.00 0.00 3.71
907 1237 1.470890 GGTCTCTTCACACTCTCCTCG 59.529 57.143 0.00 0.00 0.00 4.63
908 1238 1.135517 GTCTCTTCACACTCTCCTCGC 60.136 57.143 0.00 0.00 0.00 5.03
909 1239 0.179176 CTCTTCACACTCTCCTCGCG 60.179 60.000 0.00 0.00 0.00 5.87
910 1240 0.605589 TCTTCACACTCTCCTCGCGA 60.606 55.000 9.26 9.26 0.00 5.87
911 1241 0.455295 CTTCACACTCTCCTCGCGAC 60.455 60.000 3.71 0.00 0.00 5.19
927 1257 1.519455 GACCATCGGAGTTCAGCGG 60.519 63.158 0.00 0.00 0.00 5.52
962 1295 1.531149 AGAAATCAAGTTCGTGCCACG 59.469 47.619 11.80 11.80 44.19 4.94
1332 1680 1.002624 GTCGCCCAAGTCCATCCAA 60.003 57.895 0.00 0.00 0.00 3.53
1721 2072 3.005554 ACAACTGATCGAGCTCAAATGG 58.994 45.455 15.40 3.09 0.00 3.16
1761 2137 0.453390 GAGGGCATTTCAAGCTTCGG 59.547 55.000 0.00 0.00 0.00 4.30
1794 2170 5.263599 TCACCACTAAGCAATTCCATCAAT 58.736 37.500 0.00 0.00 0.00 2.57
1862 2238 3.062369 TGGTCACGGTAAAAATAATCGCG 59.938 43.478 0.00 0.00 0.00 5.87
1974 2350 1.101331 GCCACTGGCGTACTAGTAGT 58.899 55.000 3.73 8.14 39.62 2.73
1975 2351 2.292267 GCCACTGGCGTACTAGTAGTA 58.708 52.381 3.73 5.90 39.62 1.82
1976 2352 2.032675 GCCACTGGCGTACTAGTAGTAC 59.967 54.545 24.79 24.79 45.71 2.73
2002 2378 6.441093 CGTATCCGTACTAGGCCAATTATA 57.559 41.667 5.01 0.00 0.00 0.98
2091 2467 9.136952 CCTTCAACTAGTTTACATGTGTACTAC 57.863 37.037 9.11 0.00 0.00 2.73
2092 2468 9.909644 CTTCAACTAGTTTACATGTGTACTACT 57.090 33.333 9.11 6.95 33.19 2.57
2093 2469 9.903682 TTCAACTAGTTTACATGTGTACTACTC 57.096 33.333 9.11 0.00 31.85 2.59
2094 2470 8.517878 TCAACTAGTTTACATGTGTACTACTCC 58.482 37.037 9.11 0.00 31.85 3.85
2095 2471 7.401955 ACTAGTTTACATGTGTACTACTCCC 57.598 40.000 9.11 0.00 31.85 4.30
2096 2472 7.180663 ACTAGTTTACATGTGTACTACTCCCT 58.819 38.462 9.11 0.00 31.85 4.20
2097 2473 6.527057 AGTTTACATGTGTACTACTCCCTC 57.473 41.667 9.11 0.00 0.00 4.30
2098 2474 6.254522 AGTTTACATGTGTACTACTCCCTCT 58.745 40.000 9.11 0.00 0.00 3.69
2099 2475 6.153000 AGTTTACATGTGTACTACTCCCTCTG 59.847 42.308 9.11 0.00 0.00 3.35
2100 2476 4.048970 ACATGTGTACTACTCCCTCTGT 57.951 45.455 0.00 0.00 0.00 3.41
2101 2477 4.417437 ACATGTGTACTACTCCCTCTGTT 58.583 43.478 0.00 0.00 0.00 3.16
2102 2478 4.463186 ACATGTGTACTACTCCCTCTGTTC 59.537 45.833 0.00 0.00 0.00 3.18
2103 2479 3.428532 TGTGTACTACTCCCTCTGTTCC 58.571 50.000 0.00 0.00 0.00 3.62
2104 2480 2.422832 GTGTACTACTCCCTCTGTTCCG 59.577 54.545 0.00 0.00 0.00 4.30
2105 2481 2.306805 TGTACTACTCCCTCTGTTCCGA 59.693 50.000 0.00 0.00 0.00 4.55
2106 2482 2.599408 ACTACTCCCTCTGTTCCGAA 57.401 50.000 0.00 0.00 0.00 4.30
2107 2483 3.103080 ACTACTCCCTCTGTTCCGAAT 57.897 47.619 0.00 0.00 0.00 3.34
2108 2484 3.442076 ACTACTCCCTCTGTTCCGAATT 58.558 45.455 0.00 0.00 0.00 2.17
2109 2485 4.607239 ACTACTCCCTCTGTTCCGAATTA 58.393 43.478 0.00 0.00 0.00 1.40
2110 2486 3.889520 ACTCCCTCTGTTCCGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
2111 2487 3.442076 ACTCCCTCTGTTCCGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
2112 2488 3.838903 ACTCCCTCTGTTCCGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
2113 2489 4.184629 CTCCCTCTGTTCCGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2114 2490 3.581332 TCCCTCTGTTCCGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
2115 2491 3.933332 CCCTCTGTTCCGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
2116 2492 4.322801 CCCTCTGTTCCGAATTACTTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
2117 2493 5.238583 CCTCTGTTCCGAATTACTTGTCTT 58.761 41.667 0.00 0.00 0.00 3.01
2118 2494 6.395629 CCTCTGTTCCGAATTACTTGTCTTA 58.604 40.000 0.00 0.00 0.00 2.10
2119 2495 6.531948 CCTCTGTTCCGAATTACTTGTCTTAG 59.468 42.308 0.00 0.00 0.00 2.18
2120 2496 7.223260 TCTGTTCCGAATTACTTGTCTTAGA 57.777 36.000 0.00 0.00 0.00 2.10
2121 2497 7.837863 TCTGTTCCGAATTACTTGTCTTAGAT 58.162 34.615 0.00 0.00 0.00 1.98
2122 2498 8.311836 TCTGTTCCGAATTACTTGTCTTAGATT 58.688 33.333 0.00 0.00 0.00 2.40
2123 2499 8.842358 TGTTCCGAATTACTTGTCTTAGATTT 57.158 30.769 0.00 0.00 0.00 2.17
2124 2500 8.717821 TGTTCCGAATTACTTGTCTTAGATTTG 58.282 33.333 0.00 0.00 0.00 2.32
2125 2501 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
2126 2502 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
2127 2503 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
2128 2504 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
2135 2511 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
2136 2512 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2137 2513 8.155821 TGTCTTAGATTTGTCTAGATACGGAG 57.844 38.462 0.00 0.00 0.00 4.63
2138 2514 7.228906 TGTCTTAGATTTGTCTAGATACGGAGG 59.771 40.741 0.00 0.00 0.00 4.30
2139 2515 7.229106 GTCTTAGATTTGTCTAGATACGGAGGT 59.771 40.741 0.00 0.00 0.00 3.85
2140 2516 8.435187 TCTTAGATTTGTCTAGATACGGAGGTA 58.565 37.037 0.00 0.00 0.00 3.08
2141 2517 9.233649 CTTAGATTTGTCTAGATACGGAGGTAT 57.766 37.037 0.00 0.00 42.01 2.73
2154 2530 7.778185 ATACGGAGGTATCTAGCACTAAAAT 57.222 36.000 0.00 0.00 34.18 1.82
2155 2531 5.844004 ACGGAGGTATCTAGCACTAAAATG 58.156 41.667 0.00 0.00 0.00 2.32
2156 2532 5.597182 ACGGAGGTATCTAGCACTAAAATGA 59.403 40.000 0.00 0.00 0.00 2.57
2157 2533 6.153067 CGGAGGTATCTAGCACTAAAATGAG 58.847 44.000 0.00 0.00 0.00 2.90
2158 2534 6.239064 CGGAGGTATCTAGCACTAAAATGAGT 60.239 42.308 0.00 0.00 0.00 3.41
2159 2535 7.149307 GGAGGTATCTAGCACTAAAATGAGTC 58.851 42.308 0.00 0.00 0.00 3.36
2160 2536 7.014808 GGAGGTATCTAGCACTAAAATGAGTCT 59.985 40.741 0.00 0.00 0.00 3.24
2161 2537 8.998277 AGGTATCTAGCACTAAAATGAGTCTA 57.002 34.615 0.00 0.00 0.00 2.59
2162 2538 9.073475 AGGTATCTAGCACTAAAATGAGTCTAG 57.927 37.037 0.00 0.00 33.29 2.43
2163 2539 9.069082 GGTATCTAGCACTAAAATGAGTCTAGA 57.931 37.037 11.59 11.59 38.76 2.43
2167 2543 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
2170 2546 9.142014 AGCACTAAAATGAGTCTAGATACATCT 57.858 33.333 12.66 0.00 40.86 2.90
2171 2547 9.190858 GCACTAAAATGAGTCTAGATACATCTG 57.809 37.037 12.66 7.80 37.76 2.90
2190 2566 7.851228 ACATCTGTATGTAGACAAATCCAAGA 58.149 34.615 0.00 0.00 44.66 3.02
2191 2567 7.766278 ACATCTGTATGTAGACAAATCCAAGAC 59.234 37.037 0.00 0.00 44.66 3.01
2192 2568 7.239763 TCTGTATGTAGACAAATCCAAGACA 57.760 36.000 0.00 0.00 0.00 3.41
2193 2569 7.676004 TCTGTATGTAGACAAATCCAAGACAA 58.324 34.615 0.00 0.00 0.00 3.18
2194 2570 7.819415 TCTGTATGTAGACAAATCCAAGACAAG 59.181 37.037 0.00 0.00 0.00 3.16
2195 2571 7.450074 TGTATGTAGACAAATCCAAGACAAGT 58.550 34.615 0.00 0.00 0.00 3.16
2196 2572 8.590204 TGTATGTAGACAAATCCAAGACAAGTA 58.410 33.333 0.00 0.00 0.00 2.24
2197 2573 9.431887 GTATGTAGACAAATCCAAGACAAGTAA 57.568 33.333 0.00 0.00 0.00 2.24
2199 2575 8.918202 TGTAGACAAATCCAAGACAAGTAATT 57.082 30.769 0.00 0.00 0.00 1.40
2200 2576 8.999431 TGTAGACAAATCCAAGACAAGTAATTC 58.001 33.333 0.00 0.00 0.00 2.17
2201 2577 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
2202 2578 6.149474 AGACAAATCCAAGACAAGTAATTCGG 59.851 38.462 0.00 0.00 0.00 4.30
2203 2579 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
2204 2580 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
2205 2581 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
2269 2645 6.755206 AGCAATGGGTTATGATGATGAATTG 58.245 36.000 0.00 0.00 0.00 2.32
2271 2647 6.740401 GCAATGGGTTATGATGATGAATTGCT 60.740 38.462 8.79 0.00 42.40 3.91
2369 2745 8.599774 GCAGAAGAGTCACATTTTCTATTAGAC 58.400 37.037 0.00 0.00 0.00 2.59
2370 2746 9.868277 CAGAAGAGTCACATTTTCTATTAGACT 57.132 33.333 0.00 0.00 37.55 3.24
2371 2747 9.868277 AGAAGAGTCACATTTTCTATTAGACTG 57.132 33.333 0.00 0.00 35.24 3.51
2372 2748 9.092876 GAAGAGTCACATTTTCTATTAGACTGG 57.907 37.037 0.00 0.00 35.24 4.00
2373 2749 8.140112 AGAGTCACATTTTCTATTAGACTGGT 57.860 34.615 0.00 0.00 35.24 4.00
2374 2750 9.256228 AGAGTCACATTTTCTATTAGACTGGTA 57.744 33.333 0.00 0.00 35.24 3.25
2383 2759 9.455144 TTTTCTATTAGACTGGTATAATGGGGA 57.545 33.333 9.88 4.52 29.79 4.81
2384 2760 8.666129 TTCTATTAGACTGGTATAATGGGGAG 57.334 38.462 9.88 1.80 29.79 4.30
2385 2761 7.776745 TCTATTAGACTGGTATAATGGGGAGT 58.223 38.462 9.88 0.00 29.79 3.85
2386 2762 8.908095 TCTATTAGACTGGTATAATGGGGAGTA 58.092 37.037 9.88 0.00 29.79 2.59
2387 2763 9.543231 CTATTAGACTGGTATAATGGGGAGTAA 57.457 37.037 9.88 0.00 30.60 2.24
2388 2764 7.607615 TTAGACTGGTATAATGGGGAGTAAC 57.392 40.000 0.00 0.00 0.00 2.50
2389 2765 5.789535 AGACTGGTATAATGGGGAGTAACT 58.210 41.667 0.00 0.00 0.00 2.24
2390 2766 6.210522 AGACTGGTATAATGGGGAGTAACTT 58.789 40.000 0.00 0.00 0.00 2.66
2391 2767 7.367828 AGACTGGTATAATGGGGAGTAACTTA 58.632 38.462 0.00 0.00 0.00 2.24
2392 2768 7.509659 AGACTGGTATAATGGGGAGTAACTTAG 59.490 40.741 0.00 0.00 0.00 2.18
2393 2769 7.367828 ACTGGTATAATGGGGAGTAACTTAGA 58.632 38.462 0.00 0.00 0.00 2.10
2394 2770 7.289549 ACTGGTATAATGGGGAGTAACTTAGAC 59.710 40.741 0.00 0.00 0.00 2.59
2395 2771 7.367828 TGGTATAATGGGGAGTAACTTAGACT 58.632 38.462 0.00 0.00 0.00 3.24
2396 2772 8.513658 TGGTATAATGGGGAGTAACTTAGACTA 58.486 37.037 0.00 0.00 0.00 2.59
2397 2773 9.022884 GGTATAATGGGGAGTAACTTAGACTAG 57.977 40.741 0.00 0.00 0.00 2.57
2398 2774 9.585369 GTATAATGGGGAGTAACTTAGACTAGT 57.415 37.037 0.00 0.00 0.00 2.57
2399 2775 6.793505 AATGGGGAGTAACTTAGACTAGTG 57.206 41.667 0.00 0.00 0.00 2.74
2400 2776 5.266709 TGGGGAGTAACTTAGACTAGTGT 57.733 43.478 0.00 0.00 0.00 3.55
2401 2777 5.259632 TGGGGAGTAACTTAGACTAGTGTC 58.740 45.833 0.00 0.00 43.22 3.67
2402 2778 5.222192 TGGGGAGTAACTTAGACTAGTGTCA 60.222 44.000 0.00 0.00 45.20 3.58
2403 2779 5.892686 GGGGAGTAACTTAGACTAGTGTCAT 59.107 44.000 0.00 0.00 45.20 3.06
2404 2780 7.059156 GGGGAGTAACTTAGACTAGTGTCATA 58.941 42.308 0.00 0.00 45.20 2.15
2405 2781 7.013178 GGGGAGTAACTTAGACTAGTGTCATAC 59.987 44.444 0.00 0.00 45.20 2.39
2406 2782 7.774625 GGGAGTAACTTAGACTAGTGTCATACT 59.225 40.741 0.00 3.57 45.20 2.12
2407 2783 9.829507 GGAGTAACTTAGACTAGTGTCATACTA 57.170 37.037 0.00 0.00 45.20 1.82
2422 2798 9.574516 AGTGTCATACTAGTGTCATACATATGA 57.425 33.333 10.38 0.21 37.87 2.15
2445 2821 8.503458 TGACACTAGTCTACATTACTACCTTC 57.497 38.462 0.00 0.00 45.20 3.46
2446 2822 8.105197 TGACACTAGTCTACATTACTACCTTCA 58.895 37.037 0.00 0.00 45.20 3.02
2447 2823 9.122779 GACACTAGTCTACATTACTACCTTCAT 57.877 37.037 0.00 0.00 41.64 2.57
2452 2828 7.942990 AGTCTACATTACTACCTTCATAGTGC 58.057 38.462 0.00 0.00 36.09 4.40
2453 2829 7.560262 AGTCTACATTACTACCTTCATAGTGCA 59.440 37.037 0.00 0.00 36.09 4.57
2454 2830 8.195436 GTCTACATTACTACCTTCATAGTGCAA 58.805 37.037 0.00 0.00 36.09 4.08
2455 2831 8.755028 TCTACATTACTACCTTCATAGTGCAAA 58.245 33.333 0.00 0.00 36.09 3.68
2456 2832 7.849804 ACATTACTACCTTCATAGTGCAAAG 57.150 36.000 0.00 0.00 36.09 2.77
2457 2833 7.394816 ACATTACTACCTTCATAGTGCAAAGT 58.605 34.615 0.00 0.00 36.09 2.66
2458 2834 7.334421 ACATTACTACCTTCATAGTGCAAAGTG 59.666 37.037 0.00 0.00 36.09 3.16
2459 2835 5.228945 ACTACCTTCATAGTGCAAAGTGT 57.771 39.130 0.00 0.00 34.02 3.55
2460 2836 5.238583 ACTACCTTCATAGTGCAAAGTGTC 58.761 41.667 0.00 0.00 34.02 3.67
2461 2837 4.085357 ACCTTCATAGTGCAAAGTGTCA 57.915 40.909 0.00 0.00 0.00 3.58
2462 2838 4.655963 ACCTTCATAGTGCAAAGTGTCAT 58.344 39.130 0.00 0.00 0.00 3.06
2463 2839 5.804639 ACCTTCATAGTGCAAAGTGTCATA 58.195 37.500 0.00 0.00 0.00 2.15
2464 2840 5.877012 ACCTTCATAGTGCAAAGTGTCATAG 59.123 40.000 0.00 0.00 0.00 2.23
2465 2841 5.877012 CCTTCATAGTGCAAAGTGTCATAGT 59.123 40.000 0.00 0.00 0.00 2.12
2466 2842 7.041721 CCTTCATAGTGCAAAGTGTCATAGTA 58.958 38.462 0.00 0.00 0.00 1.82
2467 2843 7.549134 CCTTCATAGTGCAAAGTGTCATAGTAA 59.451 37.037 0.00 0.00 0.00 2.24
2468 2844 9.102757 CTTCATAGTGCAAAGTGTCATAGTAAT 57.897 33.333 0.00 0.00 0.00 1.89
2470 2846 9.750125 TCATAGTGCAAAGTGTCATAGTAATAG 57.250 33.333 0.00 0.00 0.00 1.73
2471 2847 9.534565 CATAGTGCAAAGTGTCATAGTAATAGT 57.465 33.333 0.00 0.00 0.00 2.12
2474 2850 9.751542 AGTGCAAAGTGTCATAGTAATAGTATC 57.248 33.333 0.00 0.00 0.00 2.24
2475 2851 9.529325 GTGCAAAGTGTCATAGTAATAGTATCA 57.471 33.333 0.00 0.00 0.00 2.15
2505 2881 9.799106 ATGGTTGCATTTATTAGCTTATAGACT 57.201 29.630 0.00 0.00 0.00 3.24
2506 2882 9.273016 TGGTTGCATTTATTAGCTTATAGACTC 57.727 33.333 0.00 0.00 0.00 3.36
2507 2883 9.273016 GGTTGCATTTATTAGCTTATAGACTCA 57.727 33.333 0.00 0.00 0.00 3.41
2510 2886 9.830975 TGCATTTATTAGCTTATAGACTCAACA 57.169 29.630 0.00 0.00 0.00 3.33
2518 2894 7.856145 AGCTTATAGACTCAACATTTCTTGG 57.144 36.000 0.00 0.00 0.00 3.61
2519 2895 6.825721 AGCTTATAGACTCAACATTTCTTGGG 59.174 38.462 0.00 0.00 0.00 4.12
2520 2896 6.823689 GCTTATAGACTCAACATTTCTTGGGA 59.176 38.462 0.00 0.00 0.00 4.37
2521 2897 7.336931 GCTTATAGACTCAACATTTCTTGGGAA 59.663 37.037 0.00 0.00 0.00 3.97
2522 2898 8.792830 TTATAGACTCAACATTTCTTGGGAAG 57.207 34.615 0.00 0.00 32.61 3.46
2523 2899 3.823304 AGACTCAACATTTCTTGGGAAGC 59.177 43.478 0.00 0.00 32.61 3.86
2524 2900 2.554032 ACTCAACATTTCTTGGGAAGCG 59.446 45.455 0.00 0.00 32.61 4.68
2525 2901 1.269448 TCAACATTTCTTGGGAAGCGC 59.731 47.619 0.00 0.00 32.61 5.92
2526 2902 1.270550 CAACATTTCTTGGGAAGCGCT 59.729 47.619 2.64 2.64 32.61 5.92
2527 2903 2.487762 CAACATTTCTTGGGAAGCGCTA 59.512 45.455 12.05 0.00 32.61 4.26
2528 2904 3.004752 ACATTTCTTGGGAAGCGCTAT 57.995 42.857 12.05 0.00 32.61 2.97
2529 2905 2.684881 ACATTTCTTGGGAAGCGCTATG 59.315 45.455 12.05 10.08 32.61 2.23
2530 2906 2.489938 TTTCTTGGGAAGCGCTATGT 57.510 45.000 12.05 0.00 32.61 2.29
2531 2907 1.737838 TTCTTGGGAAGCGCTATGTG 58.262 50.000 12.05 0.00 0.00 3.21
2532 2908 0.901827 TCTTGGGAAGCGCTATGTGA 59.098 50.000 12.05 1.67 0.00 3.58
2533 2909 1.486310 TCTTGGGAAGCGCTATGTGAT 59.514 47.619 12.05 0.00 0.00 3.06
2534 2910 1.600957 CTTGGGAAGCGCTATGTGATG 59.399 52.381 12.05 0.00 0.00 3.07
2535 2911 0.179048 TGGGAAGCGCTATGTGATGG 60.179 55.000 12.05 0.00 0.00 3.51
2536 2912 0.179045 GGGAAGCGCTATGTGATGGT 60.179 55.000 12.05 0.00 0.00 3.55
2537 2913 1.070134 GGGAAGCGCTATGTGATGGTA 59.930 52.381 12.05 0.00 0.00 3.25
2538 2914 2.484770 GGGAAGCGCTATGTGATGGTAA 60.485 50.000 12.05 0.00 0.00 2.85
2539 2915 2.544267 GGAAGCGCTATGTGATGGTAAC 59.456 50.000 12.05 0.00 0.00 2.50
2563 2939 8.732746 ACATAATATGTTACTCCAAACACCTC 57.267 34.615 0.00 0.00 41.63 3.85
2564 2940 8.548877 ACATAATATGTTACTCCAAACACCTCT 58.451 33.333 0.00 0.00 41.63 3.69
2565 2941 9.046296 CATAATATGTTACTCCAAACACCTCTC 57.954 37.037 0.00 0.00 41.89 3.20
2566 2942 6.875972 ATATGTTACTCCAAACACCTCTCT 57.124 37.500 0.00 0.00 41.89 3.10
2567 2943 4.602340 TGTTACTCCAAACACCTCTCTC 57.398 45.455 0.00 0.00 34.50 3.20
2568 2944 3.323979 TGTTACTCCAAACACCTCTCTCC 59.676 47.826 0.00 0.00 34.50 3.71
2569 2945 2.407340 ACTCCAAACACCTCTCTCCT 57.593 50.000 0.00 0.00 0.00 3.69
2570 2946 2.695585 ACTCCAAACACCTCTCTCCTT 58.304 47.619 0.00 0.00 0.00 3.36
2571 2947 3.858135 ACTCCAAACACCTCTCTCCTTA 58.142 45.455 0.00 0.00 0.00 2.69
2572 2948 4.430441 ACTCCAAACACCTCTCTCCTTAT 58.570 43.478 0.00 0.00 0.00 1.73
2573 2949 4.846940 ACTCCAAACACCTCTCTCCTTATT 59.153 41.667 0.00 0.00 0.00 1.40
2574 2950 6.023603 ACTCCAAACACCTCTCTCCTTATTA 58.976 40.000 0.00 0.00 0.00 0.98
2575 2951 6.500751 ACTCCAAACACCTCTCTCCTTATTAA 59.499 38.462 0.00 0.00 0.00 1.40
2576 2952 6.708285 TCCAAACACCTCTCTCCTTATTAAC 58.292 40.000 0.00 0.00 0.00 2.01
2577 2953 6.500751 TCCAAACACCTCTCTCCTTATTAACT 59.499 38.462 0.00 0.00 0.00 2.24
2578 2954 7.676893 TCCAAACACCTCTCTCCTTATTAACTA 59.323 37.037 0.00 0.00 0.00 2.24
2579 2955 7.982354 CCAAACACCTCTCTCCTTATTAACTAG 59.018 40.741 0.00 0.00 0.00 2.57
2580 2956 7.663043 AACACCTCTCTCCTTATTAACTAGG 57.337 40.000 0.00 0.00 0.00 3.02
2581 2957 6.982899 ACACCTCTCTCCTTATTAACTAGGA 58.017 40.000 7.09 7.09 38.22 2.94
2592 2968 8.759782 TCCTTATTAACTAGGAGCCATATAAGC 58.240 37.037 3.78 0.00 35.66 3.09
2593 2969 8.540388 CCTTATTAACTAGGAGCCATATAAGCA 58.460 37.037 0.00 0.00 33.13 3.91
2594 2970 9.944376 CTTATTAACTAGGAGCCATATAAGCAA 57.056 33.333 0.00 0.00 0.00 3.91
2596 2972 8.622948 ATTAACTAGGAGCCATATAAGCAAAC 57.377 34.615 0.00 0.00 0.00 2.93
2597 2973 5.896073 ACTAGGAGCCATATAAGCAAACT 57.104 39.130 0.00 0.00 0.00 2.66
2598 2974 6.253946 ACTAGGAGCCATATAAGCAAACTT 57.746 37.500 0.00 0.00 40.07 2.66
2599 2975 6.058183 ACTAGGAGCCATATAAGCAAACTTG 58.942 40.000 0.00 0.00 36.57 3.16
2600 2976 4.860022 AGGAGCCATATAAGCAAACTTGT 58.140 39.130 1.44 0.00 36.57 3.16
2601 2977 4.884164 AGGAGCCATATAAGCAAACTTGTC 59.116 41.667 1.44 0.00 36.57 3.18
2602 2978 4.884164 GGAGCCATATAAGCAAACTTGTCT 59.116 41.667 1.44 0.00 36.57 3.41
2603 2979 5.358160 GGAGCCATATAAGCAAACTTGTCTT 59.642 40.000 1.44 5.07 36.57 3.01
2604 2980 6.199937 AGCCATATAAGCAAACTTGTCTTG 57.800 37.500 8.46 0.00 36.57 3.02
2605 2981 5.945784 AGCCATATAAGCAAACTTGTCTTGA 59.054 36.000 8.46 0.67 36.57 3.02
2606 2982 6.094603 AGCCATATAAGCAAACTTGTCTTGAG 59.905 38.462 8.46 0.00 36.57 3.02
2607 2983 6.094048 GCCATATAAGCAAACTTGTCTTGAGA 59.906 38.462 8.46 0.00 36.57 3.27
2608 2984 7.201767 GCCATATAAGCAAACTTGTCTTGAGAT 60.202 37.037 8.46 0.75 36.57 2.75
2609 2985 8.127327 CCATATAAGCAAACTTGTCTTGAGATG 58.873 37.037 8.46 8.40 36.57 2.90
2610 2986 8.671921 CATATAAGCAAACTTGTCTTGAGATGT 58.328 33.333 8.46 0.00 36.57 3.06
2611 2987 4.825546 AGCAAACTTGTCTTGAGATGTG 57.174 40.909 0.00 0.00 0.00 3.21
2612 2988 4.202441 AGCAAACTTGTCTTGAGATGTGT 58.798 39.130 0.00 0.00 0.00 3.72
2613 2989 4.641989 AGCAAACTTGTCTTGAGATGTGTT 59.358 37.500 0.00 0.00 0.00 3.32
2614 2990 5.822519 AGCAAACTTGTCTTGAGATGTGTTA 59.177 36.000 0.00 0.00 0.00 2.41
2615 2991 6.488006 AGCAAACTTGTCTTGAGATGTGTTAT 59.512 34.615 0.00 0.00 0.00 1.89
2616 2992 6.580041 GCAAACTTGTCTTGAGATGTGTTATG 59.420 38.462 0.00 0.00 0.00 1.90
2617 2993 7.642669 CAAACTTGTCTTGAGATGTGTTATGT 58.357 34.615 0.00 0.00 0.00 2.29
2618 2994 7.807977 AACTTGTCTTGAGATGTGTTATGTT 57.192 32.000 0.00 0.00 0.00 2.71
2619 2995 8.902540 AACTTGTCTTGAGATGTGTTATGTTA 57.097 30.769 0.00 0.00 0.00 2.41
2620 2996 8.311650 ACTTGTCTTGAGATGTGTTATGTTAC 57.688 34.615 0.00 0.00 0.00 2.50
2621 2997 8.150945 ACTTGTCTTGAGATGTGTTATGTTACT 58.849 33.333 0.00 0.00 0.00 2.24
2622 2998 9.639601 CTTGTCTTGAGATGTGTTATGTTACTA 57.360 33.333 0.00 0.00 0.00 1.82
2623 2999 9.639601 TTGTCTTGAGATGTGTTATGTTACTAG 57.360 33.333 0.00 0.00 0.00 2.57
2624 3000 7.759886 TGTCTTGAGATGTGTTATGTTACTAGC 59.240 37.037 0.00 0.00 0.00 3.42
2625 3001 7.976734 GTCTTGAGATGTGTTATGTTACTAGCT 59.023 37.037 0.00 0.00 0.00 3.32
2626 3002 9.185680 TCTTGAGATGTGTTATGTTACTAGCTA 57.814 33.333 0.00 0.00 0.00 3.32
2627 3003 9.803315 CTTGAGATGTGTTATGTTACTAGCTAA 57.197 33.333 0.00 0.00 0.00 3.09
2628 3004 9.803315 TTGAGATGTGTTATGTTACTAGCTAAG 57.197 33.333 0.00 0.00 0.00 2.18
2629 3005 8.967918 TGAGATGTGTTATGTTACTAGCTAAGT 58.032 33.333 0.00 0.00 42.62 2.24
2630 3006 9.804758 GAGATGTGTTATGTTACTAGCTAAGTT 57.195 33.333 0.00 0.00 39.80 2.66
2635 3011 9.513727 GTGTTATGTTACTAGCTAAGTTACTCC 57.486 37.037 0.00 0.00 38.33 3.85
2636 3012 8.689972 TGTTATGTTACTAGCTAAGTTACTCCC 58.310 37.037 0.00 0.00 38.33 4.30
2637 3013 8.689972 GTTATGTTACTAGCTAAGTTACTCCCA 58.310 37.037 0.00 0.00 38.33 4.37
2638 3014 6.521151 TGTTACTAGCTAAGTTACTCCCAC 57.479 41.667 0.00 0.00 38.33 4.61
2639 3015 6.251471 TGTTACTAGCTAAGTTACTCCCACT 58.749 40.000 0.00 0.00 38.33 4.00
2640 3016 7.405292 TGTTACTAGCTAAGTTACTCCCACTA 58.595 38.462 0.00 0.00 38.33 2.74
2641 3017 8.057623 TGTTACTAGCTAAGTTACTCCCACTAT 58.942 37.037 0.00 0.00 38.33 2.12
2642 3018 6.963083 ACTAGCTAAGTTACTCCCACTATG 57.037 41.667 0.00 0.00 33.35 2.23
2643 3019 6.670617 ACTAGCTAAGTTACTCCCACTATGA 58.329 40.000 0.00 0.00 33.35 2.15
2644 3020 6.773685 ACTAGCTAAGTTACTCCCACTATGAG 59.226 42.308 0.00 0.00 33.35 2.90
2645 3021 5.520751 AGCTAAGTTACTCCCACTATGAGT 58.479 41.667 0.00 0.00 44.85 3.41
2646 3022 6.670617 AGCTAAGTTACTCCCACTATGAGTA 58.329 40.000 0.00 0.00 42.78 2.59
2647 3023 6.773685 AGCTAAGTTACTCCCACTATGAGTAG 59.226 42.308 0.00 0.00 43.94 2.57
2648 3024 5.855740 AAGTTACTCCCACTATGAGTAGC 57.144 43.478 6.27 6.27 43.94 3.58
2649 3025 4.216708 AGTTACTCCCACTATGAGTAGCC 58.783 47.826 9.66 2.42 43.49 3.93
2650 3026 4.079096 AGTTACTCCCACTATGAGTAGCCT 60.079 45.833 9.66 4.21 43.49 4.58
2651 3027 3.406512 ACTCCCACTATGAGTAGCCTT 57.593 47.619 0.00 0.00 41.17 4.35
2652 3028 4.537945 ACTCCCACTATGAGTAGCCTTA 57.462 45.455 0.00 0.00 41.17 2.69
2653 3029 4.880164 ACTCCCACTATGAGTAGCCTTAA 58.120 43.478 0.00 0.00 41.17 1.85
2654 3030 5.278061 ACTCCCACTATGAGTAGCCTTAAA 58.722 41.667 0.00 0.00 41.17 1.52
2655 3031 5.724854 ACTCCCACTATGAGTAGCCTTAAAA 59.275 40.000 0.00 0.00 41.17 1.52
2656 3032 6.127026 ACTCCCACTATGAGTAGCCTTAAAAG 60.127 42.308 0.00 0.00 41.17 2.27
2657 3033 5.962031 TCCCACTATGAGTAGCCTTAAAAGA 59.038 40.000 0.00 0.00 0.00 2.52
2658 3034 6.098409 TCCCACTATGAGTAGCCTTAAAAGAG 59.902 42.308 0.00 0.00 0.00 2.85
2659 3035 6.098409 CCCACTATGAGTAGCCTTAAAAGAGA 59.902 42.308 0.00 0.00 0.00 3.10
2660 3036 7.206687 CCACTATGAGTAGCCTTAAAAGAGAG 58.793 42.308 0.00 0.00 0.00 3.20
2661 3037 7.147811 CCACTATGAGTAGCCTTAAAAGAGAGT 60.148 40.741 0.00 0.00 0.00 3.24
2662 3038 7.704472 CACTATGAGTAGCCTTAAAAGAGAGTG 59.296 40.741 0.00 0.00 0.00 3.51
2663 3039 6.859112 ATGAGTAGCCTTAAAAGAGAGTGA 57.141 37.500 0.00 0.00 0.00 3.41
2664 3040 6.665992 TGAGTAGCCTTAAAAGAGAGTGAA 57.334 37.500 0.00 0.00 0.00 3.18
2665 3041 7.062749 TGAGTAGCCTTAAAAGAGAGTGAAA 57.937 36.000 0.00 0.00 0.00 2.69
2666 3042 7.680730 TGAGTAGCCTTAAAAGAGAGTGAAAT 58.319 34.615 0.00 0.00 0.00 2.17
2667 3043 8.812972 TGAGTAGCCTTAAAAGAGAGTGAAATA 58.187 33.333 0.00 0.00 0.00 1.40
2668 3044 9.308318 GAGTAGCCTTAAAAGAGAGTGAAATAG 57.692 37.037 0.00 0.00 0.00 1.73
2669 3045 6.993786 AGCCTTAAAAGAGAGTGAAATAGC 57.006 37.500 0.00 0.00 0.00 2.97
2670 3046 6.716284 AGCCTTAAAAGAGAGTGAAATAGCT 58.284 36.000 0.00 0.00 0.00 3.32
2671 3047 7.852263 AGCCTTAAAAGAGAGTGAAATAGCTA 58.148 34.615 0.00 0.00 0.00 3.32
2672 3048 8.490311 AGCCTTAAAAGAGAGTGAAATAGCTAT 58.510 33.333 0.00 0.00 0.00 2.97
2673 3049 9.114952 GCCTTAAAAGAGAGTGAAATAGCTATT 57.885 33.333 13.37 13.37 0.00 1.73
2678 3054 9.520515 AAAAGAGAGTGAAATAGCTATTCCAAA 57.479 29.630 19.11 3.25 0.00 3.28
2679 3055 8.729805 AAGAGAGTGAAATAGCTATTCCAAAG 57.270 34.615 19.11 0.00 0.00 2.77
2680 3056 6.765512 AGAGAGTGAAATAGCTATTCCAAAGC 59.234 38.462 19.11 6.09 40.40 3.51
2681 3057 5.525378 AGAGTGAAATAGCTATTCCAAAGCG 59.475 40.000 19.11 0.00 44.87 4.68
2682 3058 4.576463 AGTGAAATAGCTATTCCAAAGCGG 59.424 41.667 19.11 0.00 44.87 5.52
2683 3059 4.574828 GTGAAATAGCTATTCCAAAGCGGA 59.425 41.667 19.11 0.00 44.87 5.54
2693 3069 3.478857 TCCAAAGCGGAGTTACTTTCA 57.521 42.857 0.00 0.00 39.64 2.69
2694 3070 3.811083 TCCAAAGCGGAGTTACTTTCAA 58.189 40.909 0.00 0.00 39.64 2.69
2695 3071 3.813166 TCCAAAGCGGAGTTACTTTCAAG 59.187 43.478 0.00 0.00 39.64 3.02
2696 3072 3.813166 CCAAAGCGGAGTTACTTTCAAGA 59.187 43.478 0.00 0.00 33.92 3.02
2697 3073 4.083802 CCAAAGCGGAGTTACTTTCAAGAG 60.084 45.833 0.00 0.00 33.92 2.85
2698 3074 3.320673 AGCGGAGTTACTTTCAAGAGG 57.679 47.619 0.00 0.00 0.00 3.69
2699 3075 2.897969 AGCGGAGTTACTTTCAAGAGGA 59.102 45.455 0.00 0.00 0.00 3.71
2700 3076 3.323979 AGCGGAGTTACTTTCAAGAGGAA 59.676 43.478 0.00 0.00 0.00 3.36
2701 3077 3.432592 GCGGAGTTACTTTCAAGAGGAAC 59.567 47.826 0.00 0.00 34.56 3.62
2702 3078 4.628074 CGGAGTTACTTTCAAGAGGAACA 58.372 43.478 3.12 0.00 34.56 3.18
2703 3079 5.054477 CGGAGTTACTTTCAAGAGGAACAA 58.946 41.667 3.12 0.00 34.56 2.83
2704 3080 5.050295 CGGAGTTACTTTCAAGAGGAACAAC 60.050 44.000 3.12 0.00 34.56 3.32
2705 3081 5.820947 GGAGTTACTTTCAAGAGGAACAACA 59.179 40.000 3.12 0.00 34.56 3.33
2706 3082 6.486993 GGAGTTACTTTCAAGAGGAACAACAT 59.513 38.462 3.12 0.00 34.56 2.71
2707 3083 7.308049 GGAGTTACTTTCAAGAGGAACAACATC 60.308 40.741 3.12 0.00 34.56 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.125811 ACAGCTATACAAGTGAGGGATTTAGAA 59.874 37.037 0.00 0.00 0.00 2.10
10 11 2.093500 TGCACAGCTATACAAGTGAGGG 60.093 50.000 3.94 0.00 33.99 4.30
15 16 2.417379 CGAGGTGCACAGCTATACAAGT 60.417 50.000 20.43 0.00 39.57 3.16
29 31 4.972440 GCATAAATCATTTTCTCGAGGTGC 59.028 41.667 13.56 0.00 0.00 5.01
32 34 4.580167 TGGGCATAAATCATTTTCTCGAGG 59.420 41.667 13.56 0.00 0.00 4.63
38 40 4.305989 TCGCTGGGCATAAATCATTTTC 57.694 40.909 0.00 0.00 0.00 2.29
61 63 1.653151 GTGGCTTATCCTGTTCGGTC 58.347 55.000 0.00 0.00 35.26 4.79
70 72 1.823470 TGCATGCCGTGGCTTATCC 60.823 57.895 16.68 0.00 42.51 2.59
185 200 2.265739 GCATGTCAGCACCTCGGA 59.734 61.111 0.00 0.00 0.00 4.55
239 254 9.952188 TCTAGATACATCTATTTTTGTGACGAG 57.048 33.333 0.00 0.00 38.60 4.18
272 287 8.678199 CACACGTATGGATGTATCTAGATGTAT 58.322 37.037 15.79 9.11 29.44 2.29
273 288 7.881232 TCACACGTATGGATGTATCTAGATGTA 59.119 37.037 15.79 4.44 29.44 2.29
274 289 6.715264 TCACACGTATGGATGTATCTAGATGT 59.285 38.462 15.79 1.25 30.36 3.06
275 290 7.024171 GTCACACGTATGGATGTATCTAGATG 58.976 42.308 15.79 0.00 0.00 2.90
277 292 6.059484 TGTCACACGTATGGATGTATCTAGA 58.941 40.000 0.00 0.00 0.00 2.43
278 293 6.313744 TGTCACACGTATGGATGTATCTAG 57.686 41.667 0.00 0.00 0.00 2.43
279 294 6.702716 TTGTCACACGTATGGATGTATCTA 57.297 37.500 0.00 0.00 0.00 1.98
280 295 5.592104 TTGTCACACGTATGGATGTATCT 57.408 39.130 0.00 0.00 0.00 1.98
281 296 6.844696 ATTTGTCACACGTATGGATGTATC 57.155 37.500 0.00 0.00 0.00 2.24
282 297 8.902540 ATTATTTGTCACACGTATGGATGTAT 57.097 30.769 0.00 0.00 0.00 2.29
283 298 8.725405 AATTATTTGTCACACGTATGGATGTA 57.275 30.769 0.00 0.00 0.00 2.29
284 299 7.465379 CGAATTATTTGTCACACGTATGGATGT 60.465 37.037 0.00 0.00 0.00 3.06
285 300 6.845782 CGAATTATTTGTCACACGTATGGATG 59.154 38.462 0.00 0.00 0.00 3.51
288 303 6.339194 TCGAATTATTTGTCACACGTATGG 57.661 37.500 0.00 0.00 0.00 2.74
290 305 6.951530 CGTTTCGAATTATTTGTCACACGTAT 59.048 34.615 0.00 0.00 0.00 3.06
292 307 5.050904 TCGTTTCGAATTATTTGTCACACGT 60.051 36.000 0.00 0.00 31.06 4.49
293 308 5.367563 TCGTTTCGAATTATTTGTCACACG 58.632 37.500 0.00 1.19 31.06 4.49
294 309 6.302313 CCTTCGTTTCGAATTATTTGTCACAC 59.698 38.462 0.00 0.00 44.85 3.82
295 310 6.203145 TCCTTCGTTTCGAATTATTTGTCACA 59.797 34.615 0.00 0.00 44.85 3.58
297 312 6.788684 TCCTTCGTTTCGAATTATTTGTCA 57.211 33.333 0.00 0.00 44.85 3.58
299 314 7.198306 ACTTCCTTCGTTTCGAATTATTTGT 57.802 32.000 0.00 0.00 44.85 2.83
300 315 7.903431 CCTACTTCCTTCGTTTCGAATTATTTG 59.097 37.037 0.00 0.00 44.85 2.32
301 316 7.820872 TCCTACTTCCTTCGTTTCGAATTATTT 59.179 33.333 0.00 0.00 44.85 1.40
302 317 7.325694 TCCTACTTCCTTCGTTTCGAATTATT 58.674 34.615 0.00 0.00 44.85 1.40
303 318 6.870769 TCCTACTTCCTTCGTTTCGAATTAT 58.129 36.000 0.00 0.00 44.85 1.28
304 319 6.271488 TCCTACTTCCTTCGTTTCGAATTA 57.729 37.500 0.00 0.00 44.85 1.40
305 320 5.143376 TCCTACTTCCTTCGTTTCGAATT 57.857 39.130 0.00 0.00 44.85 2.17
306 321 4.796038 TCCTACTTCCTTCGTTTCGAAT 57.204 40.909 0.00 0.00 44.85 3.34
307 322 4.673580 CGATCCTACTTCCTTCGTTTCGAA 60.674 45.833 0.00 0.00 43.75 3.71
308 323 3.181503 CGATCCTACTTCCTTCGTTTCGA 60.182 47.826 0.00 0.00 0.00 3.71
310 325 4.367386 TCGATCCTACTTCCTTCGTTTC 57.633 45.455 0.00 0.00 0.00 2.78
311 326 4.796038 TTCGATCCTACTTCCTTCGTTT 57.204 40.909 0.00 0.00 0.00 3.60
316 385 4.843728 TGCAAATTCGATCCTACTTCCTT 58.156 39.130 0.00 0.00 0.00 3.36
320 389 4.192317 GTCCTGCAAATTCGATCCTACTT 58.808 43.478 0.00 0.00 0.00 2.24
357 426 8.508875 GGAAACACTAACGGAAATAATTGAAGA 58.491 33.333 0.00 0.00 0.00 2.87
358 427 8.512138 AGGAAACACTAACGGAAATAATTGAAG 58.488 33.333 0.00 0.00 0.00 3.02
359 428 8.398878 AGGAAACACTAACGGAAATAATTGAA 57.601 30.769 0.00 0.00 0.00 2.69
361 430 7.962918 CAGAGGAAACACTAACGGAAATAATTG 59.037 37.037 0.00 0.00 0.00 2.32
364 433 5.410439 GCAGAGGAAACACTAACGGAAATAA 59.590 40.000 0.00 0.00 0.00 1.40
365 434 4.933400 GCAGAGGAAACACTAACGGAAATA 59.067 41.667 0.00 0.00 0.00 1.40
368 437 2.103432 TGCAGAGGAAACACTAACGGAA 59.897 45.455 0.00 0.00 0.00 4.30
370 439 2.163818 TGCAGAGGAAACACTAACGG 57.836 50.000 0.00 0.00 0.00 4.44
430 499 3.672867 GGTGTGTGTGTGTGTTTCTTTTG 59.327 43.478 0.00 0.00 0.00 2.44
439 508 0.107703 ACAGAGGGTGTGTGTGTGTG 60.108 55.000 0.00 0.00 38.28 3.82
440 509 0.618458 AACAGAGGGTGTGTGTGTGT 59.382 50.000 0.00 0.00 40.26 3.72
441 510 1.299541 GAACAGAGGGTGTGTGTGTG 58.700 55.000 0.00 0.00 40.26 3.82
443 512 0.469917 AGGAACAGAGGGTGTGTGTG 59.530 55.000 0.00 0.00 40.26 3.82
445 514 3.485463 TTTAGGAACAGAGGGTGTGTG 57.515 47.619 0.00 0.00 40.26 3.82
446 515 7.402071 TCTTATATTTAGGAACAGAGGGTGTGT 59.598 37.037 0.00 0.00 40.26 3.72
447 516 7.792032 TCTTATATTTAGGAACAGAGGGTGTG 58.208 38.462 0.00 0.00 40.26 3.82
485 562 4.911514 TGGAGCACCTCTGTTTTTAAAC 57.088 40.909 0.71 0.00 36.95 2.01
486 563 4.522789 GGATGGAGCACCTCTGTTTTTAAA 59.477 41.667 0.71 0.00 37.04 1.52
488 565 3.073798 TGGATGGAGCACCTCTGTTTTTA 59.926 43.478 0.71 0.00 37.04 1.52
489 566 2.158475 TGGATGGAGCACCTCTGTTTTT 60.158 45.455 0.71 0.00 37.04 1.94
490 567 1.425066 TGGATGGAGCACCTCTGTTTT 59.575 47.619 0.71 0.00 37.04 2.43
491 568 1.067295 TGGATGGAGCACCTCTGTTT 58.933 50.000 0.71 0.00 37.04 2.83
493 570 1.067295 TTTGGATGGAGCACCTCTGT 58.933 50.000 0.71 0.00 37.04 3.41
494 571 2.431954 ATTTGGATGGAGCACCTCTG 57.568 50.000 0.71 0.00 37.04 3.35
495 572 2.846206 TGTATTTGGATGGAGCACCTCT 59.154 45.455 0.71 0.00 37.04 3.69
496 573 3.281727 TGTATTTGGATGGAGCACCTC 57.718 47.619 0.71 0.00 37.04 3.85
499 576 3.063997 CGTCTTGTATTTGGATGGAGCAC 59.936 47.826 0.00 0.00 0.00 4.40
500 577 3.270027 CGTCTTGTATTTGGATGGAGCA 58.730 45.455 0.00 0.00 0.00 4.26
503 580 5.067273 ACAAACGTCTTGTATTTGGATGGA 58.933 37.500 12.41 0.00 37.59 3.41
504 581 5.181245 AGACAAACGTCTTGTATTTGGATGG 59.819 40.000 13.57 0.00 41.03 3.51
505 582 6.241207 AGACAAACGTCTTGTATTTGGATG 57.759 37.500 13.57 0.00 41.03 3.51
525 614 8.545420 TGTCTCAAAATGTAAGACGTTTAAGAC 58.455 33.333 20.10 20.10 42.64 3.01
529 716 8.651391 TTCTGTCTCAAAATGTAAGACGTTTA 57.349 30.769 0.00 0.00 41.84 2.01
569 859 9.498307 CTCTGTTTGTTTTAAAATGTAAGACGT 57.502 29.630 3.52 0.00 0.00 4.34
576 866 9.868277 TGACATTCTCTGTTTGTTTTAAAATGT 57.132 25.926 3.52 0.00 38.54 2.71
607 906 5.279406 CCCCATGTCTTAAAATGCAAGTCAA 60.279 40.000 0.00 0.00 0.00 3.18
608 907 4.220382 CCCCATGTCTTAAAATGCAAGTCA 59.780 41.667 0.00 0.00 0.00 3.41
610 909 4.415596 TCCCCATGTCTTAAAATGCAAGT 58.584 39.130 0.00 0.00 0.00 3.16
621 920 5.337330 CGTTTCTAACTACTCCCCATGTCTT 60.337 44.000 0.00 0.00 0.00 3.01
627 926 3.094572 CTCCGTTTCTAACTACTCCCCA 58.905 50.000 0.00 0.00 0.00 4.96
630 929 4.015764 AGACCTCCGTTTCTAACTACTCC 58.984 47.826 0.00 0.00 0.00 3.85
636 935 2.612221 CCACCAGACCTCCGTTTCTAAC 60.612 54.545 0.00 0.00 0.00 2.34
645 944 3.249189 TGGCACCACCAGACCTCC 61.249 66.667 0.00 0.00 46.36 4.30
653 952 0.811281 GATACAAGCTTGGCACCACC 59.189 55.000 29.18 8.18 39.84 4.61
657 956 0.097674 CGCTGATACAAGCTTGGCAC 59.902 55.000 29.18 18.78 41.24 5.01
659 958 0.097674 CACGCTGATACAAGCTTGGC 59.902 55.000 29.18 20.45 41.24 4.52
660 959 1.725641 TCACGCTGATACAAGCTTGG 58.274 50.000 29.18 12.81 41.45 3.61
661 960 2.674852 ACATCACGCTGATACAAGCTTG 59.325 45.455 24.84 24.84 42.23 4.01
692 1020 6.803320 TCTCTAGTCCGTGTTTGTATAAAACG 59.197 38.462 10.44 10.44 33.83 3.60
708 1036 3.746045 TTGGTTGTGTGTCTCTAGTCC 57.254 47.619 0.00 0.00 0.00 3.85
787 1117 3.595190 ATTTATAGGAACCAGGGGCAC 57.405 47.619 0.00 0.00 0.00 5.01
791 1121 5.319043 TGGCTTATTTATAGGAACCAGGG 57.681 43.478 0.00 0.00 0.00 4.45
894 1224 2.333417 GGTCGCGAGGAGAGTGTGA 61.333 63.158 10.24 0.00 0.00 3.58
903 1233 2.938539 GAACTCCGATGGTCGCGAGG 62.939 65.000 10.24 7.10 39.66 4.63
904 1234 1.586564 GAACTCCGATGGTCGCGAG 60.587 63.158 10.24 0.00 40.49 5.03
905 1235 2.266376 CTGAACTCCGATGGTCGCGA 62.266 60.000 3.71 3.71 38.82 5.87
906 1236 1.874019 CTGAACTCCGATGGTCGCG 60.874 63.158 0.00 0.00 38.82 5.87
907 1237 2.167861 GCTGAACTCCGATGGTCGC 61.168 63.158 0.00 0.00 38.82 5.19
908 1238 1.874019 CGCTGAACTCCGATGGTCG 60.874 63.158 0.00 0.00 40.07 4.79
909 1239 1.519455 CCGCTGAACTCCGATGGTC 60.519 63.158 0.00 0.00 0.00 4.02
910 1240 2.579201 CCGCTGAACTCCGATGGT 59.421 61.111 0.00 0.00 0.00 3.55
911 1241 2.892425 GCCGCTGAACTCCGATGG 60.892 66.667 0.00 0.00 0.00 3.51
927 1257 0.110238 TTTCTTTGATGTGCGAGCGC 60.110 50.000 8.08 8.08 42.35 5.92
936 1266 4.618489 GGCACGAACTTGATTTCTTTGATG 59.382 41.667 0.00 0.00 0.00 3.07
995 1328 1.425428 GCGCTCTTCACCATTTCCG 59.575 57.895 0.00 0.00 0.00 4.30
1096 1444 1.303799 CCCTTGTACTGCTGCTGCTG 61.304 60.000 18.66 18.66 42.70 4.41
1097 1445 1.002868 CCCTTGTACTGCTGCTGCT 60.003 57.895 17.00 0.00 40.48 4.24
1098 1446 2.694760 GCCCTTGTACTGCTGCTGC 61.695 63.158 8.89 8.89 40.20 5.25
1761 2137 1.737793 CTTAGTGGTGATTTGACCGGC 59.262 52.381 0.00 0.00 39.07 6.13
1862 2238 4.889409 TGAAGTAAGAATTGATCATGGCCC 59.111 41.667 0.00 0.00 0.00 5.80
1955 2331 1.101331 ACTACTAGTACGCCAGTGGC 58.899 55.000 25.07 25.07 46.75 5.01
2072 2448 7.556996 AGAGGGAGTAGTACACATGTAAACTAG 59.443 40.741 16.03 0.00 32.46 2.57
2091 2467 4.184629 CAAGTAATTCGGAACAGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
2092 2468 3.581332 ACAAGTAATTCGGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2093 2469 3.933332 GACAAGTAATTCGGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2094 2470 4.822026 AGACAAGTAATTCGGAACAGAGG 58.178 43.478 0.00 0.00 0.00 3.69
2095 2471 7.313646 TCTAAGACAAGTAATTCGGAACAGAG 58.686 38.462 0.00 0.00 0.00 3.35
2096 2472 7.223260 TCTAAGACAAGTAATTCGGAACAGA 57.777 36.000 0.00 0.00 0.00 3.41
2097 2473 8.480643 AATCTAAGACAAGTAATTCGGAACAG 57.519 34.615 0.00 0.00 0.00 3.16
2098 2474 8.717821 CAAATCTAAGACAAGTAATTCGGAACA 58.282 33.333 0.00 0.00 0.00 3.18
2099 2475 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
2100 2476 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
2101 2477 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
2102 2478 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
2109 2485 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
2110 2486 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
2111 2487 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2112 2488 7.228906 CCTCCGTATCTAGACAAATCTAAGACA 59.771 40.741 0.00 0.00 36.98 3.41
2113 2489 7.229106 ACCTCCGTATCTAGACAAATCTAAGAC 59.771 40.741 0.00 0.00 36.98 3.01
2114 2490 7.288560 ACCTCCGTATCTAGACAAATCTAAGA 58.711 38.462 0.00 0.00 36.98 2.10
2115 2491 7.513371 ACCTCCGTATCTAGACAAATCTAAG 57.487 40.000 0.00 0.00 36.98 2.18
2116 2492 9.228949 GATACCTCCGTATCTAGACAAATCTAA 57.771 37.037 0.00 0.00 45.11 2.10
2117 2493 8.789825 GATACCTCCGTATCTAGACAAATCTA 57.210 38.462 0.00 0.00 45.11 1.98
2118 2494 7.690952 GATACCTCCGTATCTAGACAAATCT 57.309 40.000 0.00 0.00 45.11 2.40
2130 2506 7.450634 TCATTTTAGTGCTAGATACCTCCGTAT 59.549 37.037 0.00 0.00 37.92 3.06
2131 2507 6.774170 TCATTTTAGTGCTAGATACCTCCGTA 59.226 38.462 0.00 0.00 0.00 4.02
2132 2508 5.597182 TCATTTTAGTGCTAGATACCTCCGT 59.403 40.000 0.00 0.00 0.00 4.69
2133 2509 6.085555 TCATTTTAGTGCTAGATACCTCCG 57.914 41.667 0.00 0.00 0.00 4.63
2134 2510 7.014808 AGACTCATTTTAGTGCTAGATACCTCC 59.985 40.741 0.00 0.00 0.00 4.30
2135 2511 7.947282 AGACTCATTTTAGTGCTAGATACCTC 58.053 38.462 0.00 0.00 0.00 3.85
2136 2512 7.906199 AGACTCATTTTAGTGCTAGATACCT 57.094 36.000 0.00 0.00 0.00 3.08
2137 2513 9.069082 TCTAGACTCATTTTAGTGCTAGATACC 57.931 37.037 0.00 0.00 34.69 2.73
2141 2517 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
2144 2520 9.142014 AGATGTATCTAGACTCATTTTAGTGCT 57.858 33.333 11.25 2.44 34.85 4.40
2145 2521 9.190858 CAGATGTATCTAGACTCATTTTAGTGC 57.809 37.037 11.25 0.69 34.85 4.40
2154 2530 9.713713 GTCTACATACAGATGTATCTAGACTCA 57.286 37.037 25.52 0.00 45.59 3.41
2161 2537 9.147732 TGGATTTGTCTACATACAGATGTATCT 57.852 33.333 2.47 0.00 45.42 1.98
2162 2538 9.764363 TTGGATTTGTCTACATACAGATGTATC 57.236 33.333 2.47 0.00 45.42 2.24
2163 2539 9.770097 CTTGGATTTGTCTACATACAGATGTAT 57.230 33.333 0.00 0.00 45.42 2.29
2164 2540 8.977412 TCTTGGATTTGTCTACATACAGATGTA 58.023 33.333 0.00 0.00 44.77 2.29
2166 2542 7.765819 TGTCTTGGATTTGTCTACATACAGATG 59.234 37.037 0.00 0.00 39.16 2.90
2167 2543 7.851228 TGTCTTGGATTTGTCTACATACAGAT 58.149 34.615 0.00 0.00 0.00 2.90
2168 2544 7.239763 TGTCTTGGATTTGTCTACATACAGA 57.760 36.000 0.00 0.00 0.00 3.41
2169 2545 7.604164 ACTTGTCTTGGATTTGTCTACATACAG 59.396 37.037 0.00 0.00 0.00 2.74
2170 2546 7.450074 ACTTGTCTTGGATTTGTCTACATACA 58.550 34.615 0.00 0.00 0.00 2.29
2171 2547 7.907214 ACTTGTCTTGGATTTGTCTACATAC 57.093 36.000 0.00 0.00 0.00 2.39
2173 2549 9.520515 AATTACTTGTCTTGGATTTGTCTACAT 57.479 29.630 0.00 0.00 0.00 2.29
2174 2550 8.918202 AATTACTTGTCTTGGATTTGTCTACA 57.082 30.769 0.00 0.00 0.00 2.74
2175 2551 8.169268 CGAATTACTTGTCTTGGATTTGTCTAC 58.831 37.037 0.00 0.00 0.00 2.59
2176 2552 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
2177 2553 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
2178 2554 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
2179 2555 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
2180 2556 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
2181 2557 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
2182 2558 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
2183 2559 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
2184 2560 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2185 2561 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
2186 2562 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
2187 2563 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
2188 2564 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
2189 2565 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2190 2566 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2191 2567 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2192 2568 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2193 2569 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2194 2570 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2195 2571 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2196 2572 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
2197 2573 1.687123 CATACTCCCTCCGTTCCGAAT 59.313 52.381 0.00 0.00 0.00 3.34
2198 2574 1.108776 CATACTCCCTCCGTTCCGAA 58.891 55.000 0.00 0.00 0.00 4.30
2199 2575 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
2200 2576 0.102481 CACATACTCCCTCCGTTCCG 59.898 60.000 0.00 0.00 0.00 4.30
2201 2577 1.192428 ACACATACTCCCTCCGTTCC 58.808 55.000 0.00 0.00 0.00 3.62
2202 2578 4.460948 TTTACACATACTCCCTCCGTTC 57.539 45.455 0.00 0.00 0.00 3.95
2203 2579 4.828829 CTTTTACACATACTCCCTCCGTT 58.171 43.478 0.00 0.00 0.00 4.44
2204 2580 3.369157 GCTTTTACACATACTCCCTCCGT 60.369 47.826 0.00 0.00 0.00 4.69
2205 2581 3.118738 AGCTTTTACACATACTCCCTCCG 60.119 47.826 0.00 0.00 0.00 4.63
2206 2582 4.192317 CAGCTTTTACACATACTCCCTCC 58.808 47.826 0.00 0.00 0.00 4.30
2207 2583 4.833390 ACAGCTTTTACACATACTCCCTC 58.167 43.478 0.00 0.00 0.00 4.30
2208 2584 4.910458 ACAGCTTTTACACATACTCCCT 57.090 40.909 0.00 0.00 0.00 4.20
2209 2585 5.240844 ACAAACAGCTTTTACACATACTCCC 59.759 40.000 0.00 0.00 0.00 4.30
2210 2586 6.142817 CACAAACAGCTTTTACACATACTCC 58.857 40.000 0.00 0.00 0.00 3.85
2211 2587 5.625311 GCACAAACAGCTTTTACACATACTC 59.375 40.000 0.00 0.00 0.00 2.59
2212 2588 5.067153 TGCACAAACAGCTTTTACACATACT 59.933 36.000 0.00 0.00 0.00 2.12
2269 2645 9.650371 CCTAAAACAAAGCAAAATTAAAGAAGC 57.350 29.630 0.00 0.00 0.00 3.86
2287 2663 7.534723 ACATGTAGAGTACTCACCTAAAACA 57.465 36.000 24.44 15.05 0.00 2.83
2369 2745 7.509659 AGTCTAAGTTACTCCCCATTATACCAG 59.490 40.741 0.00 0.00 0.00 4.00
2370 2746 7.367828 AGTCTAAGTTACTCCCCATTATACCA 58.632 38.462 0.00 0.00 0.00 3.25
2371 2747 7.852550 AGTCTAAGTTACTCCCCATTATACC 57.147 40.000 0.00 0.00 0.00 2.73
2372 2748 9.585369 ACTAGTCTAAGTTACTCCCCATTATAC 57.415 37.037 0.00 0.00 0.00 1.47
2373 2749 9.584008 CACTAGTCTAAGTTACTCCCCATTATA 57.416 37.037 0.00 0.00 0.00 0.98
2374 2750 8.066247 ACACTAGTCTAAGTTACTCCCCATTAT 58.934 37.037 0.00 0.00 0.00 1.28
2375 2751 7.416731 ACACTAGTCTAAGTTACTCCCCATTA 58.583 38.462 0.00 0.00 0.00 1.90
2376 2752 6.262207 ACACTAGTCTAAGTTACTCCCCATT 58.738 40.000 0.00 0.00 0.00 3.16
2377 2753 5.840081 ACACTAGTCTAAGTTACTCCCCAT 58.160 41.667 0.00 0.00 0.00 4.00
2378 2754 5.222192 TGACACTAGTCTAAGTTACTCCCCA 60.222 44.000 0.00 0.00 45.20 4.96
2379 2755 5.259632 TGACACTAGTCTAAGTTACTCCCC 58.740 45.833 0.00 0.00 45.20 4.81
2380 2756 7.774625 AGTATGACACTAGTCTAAGTTACTCCC 59.225 40.741 0.00 0.00 45.20 4.30
2381 2757 8.735692 AGTATGACACTAGTCTAAGTTACTCC 57.264 38.462 0.00 0.00 45.20 3.85
2396 2772 9.574516 TCATATGTATGACACTAGTATGACACT 57.425 33.333 1.90 0.00 37.76 3.55
2419 2795 9.122779 GAAGGTAGTAATGTAGACTAGTGTCAT 57.877 37.037 0.00 0.00 45.20 3.06
2420 2796 8.105197 TGAAGGTAGTAATGTAGACTAGTGTCA 58.895 37.037 0.00 0.00 45.20 3.58
2421 2797 8.503458 TGAAGGTAGTAATGTAGACTAGTGTC 57.497 38.462 0.00 0.00 43.22 3.67
2426 2802 9.064706 GCACTATGAAGGTAGTAATGTAGACTA 57.935 37.037 0.00 0.00 33.29 2.59
2427 2803 7.560262 TGCACTATGAAGGTAGTAATGTAGACT 59.440 37.037 0.00 0.00 33.29 3.24
2428 2804 7.713750 TGCACTATGAAGGTAGTAATGTAGAC 58.286 38.462 0.00 0.00 33.29 2.59
2429 2805 7.891498 TGCACTATGAAGGTAGTAATGTAGA 57.109 36.000 0.00 0.00 33.29 2.59
2430 2806 8.942338 TTTGCACTATGAAGGTAGTAATGTAG 57.058 34.615 0.00 0.00 33.29 2.74
2431 2807 8.537016 ACTTTGCACTATGAAGGTAGTAATGTA 58.463 33.333 0.00 0.00 33.29 2.29
2432 2808 7.334421 CACTTTGCACTATGAAGGTAGTAATGT 59.666 37.037 0.00 0.00 33.29 2.71
2433 2809 7.334421 ACACTTTGCACTATGAAGGTAGTAATG 59.666 37.037 0.00 0.00 33.29 1.90
2434 2810 7.394816 ACACTTTGCACTATGAAGGTAGTAAT 58.605 34.615 0.00 0.00 33.29 1.89
2435 2811 6.765403 ACACTTTGCACTATGAAGGTAGTAA 58.235 36.000 0.00 0.00 33.29 2.24
2436 2812 6.014925 TGACACTTTGCACTATGAAGGTAGTA 60.015 38.462 0.00 0.00 33.29 1.82
2437 2813 5.221641 TGACACTTTGCACTATGAAGGTAGT 60.222 40.000 0.00 0.00 35.34 2.73
2438 2814 5.237815 TGACACTTTGCACTATGAAGGTAG 58.762 41.667 0.00 0.00 0.00 3.18
2439 2815 5.222079 TGACACTTTGCACTATGAAGGTA 57.778 39.130 0.00 0.00 0.00 3.08
2440 2816 4.085357 TGACACTTTGCACTATGAAGGT 57.915 40.909 0.00 0.00 0.00 3.50
2441 2817 5.877012 ACTATGACACTTTGCACTATGAAGG 59.123 40.000 0.00 0.00 0.00 3.46
2442 2818 6.974932 ACTATGACACTTTGCACTATGAAG 57.025 37.500 0.00 0.00 0.00 3.02
2444 2820 9.750125 CTATTACTATGACACTTTGCACTATGA 57.250 33.333 0.00 0.00 0.00 2.15
2445 2821 9.534565 ACTATTACTATGACACTTTGCACTATG 57.465 33.333 0.00 0.00 0.00 2.23
2448 2824 9.751542 GATACTATTACTATGACACTTTGCACT 57.248 33.333 0.00 0.00 0.00 4.40
2449 2825 9.529325 TGATACTATTACTATGACACTTTGCAC 57.471 33.333 0.00 0.00 0.00 4.57
2479 2855 9.799106 AGTCTATAAGCTAATAAATGCAACCAT 57.201 29.630 0.00 0.00 0.00 3.55
2480 2856 9.273016 GAGTCTATAAGCTAATAAATGCAACCA 57.727 33.333 0.00 0.00 0.00 3.67
2481 2857 9.273016 TGAGTCTATAAGCTAATAAATGCAACC 57.727 33.333 0.00 0.00 0.00 3.77
2484 2860 9.830975 TGTTGAGTCTATAAGCTAATAAATGCA 57.169 29.630 0.00 0.00 0.00 3.96
2492 2868 9.383519 CCAAGAAATGTTGAGTCTATAAGCTAA 57.616 33.333 0.00 0.00 0.00 3.09
2493 2869 7.987458 CCCAAGAAATGTTGAGTCTATAAGCTA 59.013 37.037 0.00 0.00 0.00 3.32
2494 2870 6.825721 CCCAAGAAATGTTGAGTCTATAAGCT 59.174 38.462 0.00 0.00 0.00 3.74
2495 2871 6.823689 TCCCAAGAAATGTTGAGTCTATAAGC 59.176 38.462 0.00 0.00 0.00 3.09
2496 2872 8.792830 TTCCCAAGAAATGTTGAGTCTATAAG 57.207 34.615 0.00 0.00 0.00 1.73
2497 2873 7.336931 GCTTCCCAAGAAATGTTGAGTCTATAA 59.663 37.037 0.00 0.00 0.00 0.98
2498 2874 6.823689 GCTTCCCAAGAAATGTTGAGTCTATA 59.176 38.462 0.00 0.00 0.00 1.31
2499 2875 5.649831 GCTTCCCAAGAAATGTTGAGTCTAT 59.350 40.000 0.00 0.00 0.00 1.98
2500 2876 5.003804 GCTTCCCAAGAAATGTTGAGTCTA 58.996 41.667 0.00 0.00 0.00 2.59
2501 2877 3.823304 GCTTCCCAAGAAATGTTGAGTCT 59.177 43.478 0.00 0.00 0.00 3.24
2502 2878 3.365364 CGCTTCCCAAGAAATGTTGAGTC 60.365 47.826 0.00 0.00 0.00 3.36
2503 2879 2.554032 CGCTTCCCAAGAAATGTTGAGT 59.446 45.455 0.00 0.00 0.00 3.41
2504 2880 2.669391 GCGCTTCCCAAGAAATGTTGAG 60.669 50.000 0.00 0.00 0.00 3.02
2505 2881 1.269448 GCGCTTCCCAAGAAATGTTGA 59.731 47.619 0.00 0.00 0.00 3.18
2506 2882 1.270550 AGCGCTTCCCAAGAAATGTTG 59.729 47.619 2.64 0.00 0.00 3.33
2507 2883 1.620822 AGCGCTTCCCAAGAAATGTT 58.379 45.000 2.64 0.00 0.00 2.71
2508 2884 2.489938 TAGCGCTTCCCAAGAAATGT 57.510 45.000 18.68 0.00 0.00 2.71
2509 2885 2.684881 ACATAGCGCTTCCCAAGAAATG 59.315 45.455 18.68 12.57 0.00 2.32
2510 2886 2.684881 CACATAGCGCTTCCCAAGAAAT 59.315 45.455 18.68 0.00 0.00 2.17
2511 2887 2.083774 CACATAGCGCTTCCCAAGAAA 58.916 47.619 18.68 0.00 0.00 2.52
2512 2888 1.277842 TCACATAGCGCTTCCCAAGAA 59.722 47.619 18.68 0.00 0.00 2.52
2513 2889 0.901827 TCACATAGCGCTTCCCAAGA 59.098 50.000 18.68 3.86 0.00 3.02
2514 2890 1.600957 CATCACATAGCGCTTCCCAAG 59.399 52.381 18.68 0.00 0.00 3.61
2515 2891 1.667236 CATCACATAGCGCTTCCCAA 58.333 50.000 18.68 0.00 0.00 4.12
2516 2892 0.179048 CCATCACATAGCGCTTCCCA 60.179 55.000 18.68 0.00 0.00 4.37
2517 2893 0.179045 ACCATCACATAGCGCTTCCC 60.179 55.000 18.68 0.00 0.00 3.97
2518 2894 2.526304 TACCATCACATAGCGCTTCC 57.474 50.000 18.68 0.00 0.00 3.46
2519 2895 3.194861 TGTTACCATCACATAGCGCTTC 58.805 45.455 18.68 0.00 0.00 3.86
2520 2896 3.260475 TGTTACCATCACATAGCGCTT 57.740 42.857 18.68 0.00 0.00 4.68
2521 2897 2.979814 TGTTACCATCACATAGCGCT 57.020 45.000 17.26 17.26 0.00 5.92
2522 2898 5.862924 ATTATGTTACCATCACATAGCGC 57.137 39.130 0.00 0.00 38.16 5.92
2523 2899 8.479313 ACATATTATGTTACCATCACATAGCG 57.521 34.615 3.40 0.00 41.63 4.26
2539 2915 8.964476 AGAGGTGTTTGGAGTAACATATTATG 57.036 34.615 2.03 2.03 39.93 1.90
2540 2916 8.993424 AGAGAGGTGTTTGGAGTAACATATTAT 58.007 33.333 0.00 0.00 39.93 1.28
2541 2917 8.375493 AGAGAGGTGTTTGGAGTAACATATTA 57.625 34.615 0.00 0.00 39.93 0.98
2542 2918 7.259088 AGAGAGGTGTTTGGAGTAACATATT 57.741 36.000 0.00 0.00 39.93 1.28
2543 2919 6.127026 GGAGAGAGGTGTTTGGAGTAACATAT 60.127 42.308 0.00 0.00 39.93 1.78
2544 2920 5.187186 GGAGAGAGGTGTTTGGAGTAACATA 59.813 44.000 0.00 0.00 39.93 2.29
2545 2921 4.020128 GGAGAGAGGTGTTTGGAGTAACAT 60.020 45.833 0.00 0.00 39.93 2.71
2546 2922 3.323979 GGAGAGAGGTGTTTGGAGTAACA 59.676 47.826 0.00 0.00 35.75 2.41
2547 2923 3.579151 AGGAGAGAGGTGTTTGGAGTAAC 59.421 47.826 0.00 0.00 0.00 2.50
2548 2924 3.858135 AGGAGAGAGGTGTTTGGAGTAA 58.142 45.455 0.00 0.00 0.00 2.24
2549 2925 3.544698 AGGAGAGAGGTGTTTGGAGTA 57.455 47.619 0.00 0.00 0.00 2.59
2550 2926 2.407340 AGGAGAGAGGTGTTTGGAGT 57.593 50.000 0.00 0.00 0.00 3.85
2551 2927 5.428184 AATAAGGAGAGAGGTGTTTGGAG 57.572 43.478 0.00 0.00 0.00 3.86
2552 2928 6.500751 AGTTAATAAGGAGAGAGGTGTTTGGA 59.499 38.462 0.00 0.00 0.00 3.53
2553 2929 6.712276 AGTTAATAAGGAGAGAGGTGTTTGG 58.288 40.000 0.00 0.00 0.00 3.28
2554 2930 7.982354 CCTAGTTAATAAGGAGAGAGGTGTTTG 59.018 40.741 0.76 0.00 34.58 2.93
2555 2931 7.899709 TCCTAGTTAATAAGGAGAGAGGTGTTT 59.100 37.037 4.98 0.00 36.97 2.83
2556 2932 7.420029 TCCTAGTTAATAAGGAGAGAGGTGTT 58.580 38.462 4.98 0.00 36.97 3.32
2557 2933 6.982899 TCCTAGTTAATAAGGAGAGAGGTGT 58.017 40.000 4.98 0.00 36.97 4.16
2566 2942 8.759782 GCTTATATGGCTCCTAGTTAATAAGGA 58.240 37.037 8.12 8.12 39.63 3.36
2567 2943 8.540388 TGCTTATATGGCTCCTAGTTAATAAGG 58.460 37.037 0.00 0.63 0.00 2.69
2568 2944 9.944376 TTGCTTATATGGCTCCTAGTTAATAAG 57.056 33.333 4.57 0.00 0.00 1.73
2570 2946 9.720769 GTTTGCTTATATGGCTCCTAGTTAATA 57.279 33.333 4.57 0.00 0.00 0.98
2571 2947 8.440771 AGTTTGCTTATATGGCTCCTAGTTAAT 58.559 33.333 4.57 0.00 0.00 1.40
2572 2948 7.802117 AGTTTGCTTATATGGCTCCTAGTTAA 58.198 34.615 4.57 0.00 0.00 2.01
2573 2949 7.374975 AGTTTGCTTATATGGCTCCTAGTTA 57.625 36.000 4.57 0.00 0.00 2.24
2574 2950 6.253946 AGTTTGCTTATATGGCTCCTAGTT 57.746 37.500 4.57 0.00 0.00 2.24
2575 2951 5.896073 AGTTTGCTTATATGGCTCCTAGT 57.104 39.130 4.57 0.00 0.00 2.57
2576 2952 6.058183 ACAAGTTTGCTTATATGGCTCCTAG 58.942 40.000 4.57 0.00 32.87 3.02
2577 2953 6.001449 ACAAGTTTGCTTATATGGCTCCTA 57.999 37.500 4.57 0.00 32.87 2.94
2578 2954 4.860022 ACAAGTTTGCTTATATGGCTCCT 58.140 39.130 4.57 0.00 32.87 3.69
2579 2955 4.884164 AGACAAGTTTGCTTATATGGCTCC 59.116 41.667 4.57 0.00 32.87 4.70
2580 2956 6.094048 TCAAGACAAGTTTGCTTATATGGCTC 59.906 38.462 4.57 0.00 32.87 4.70
2581 2957 5.945784 TCAAGACAAGTTTGCTTATATGGCT 59.054 36.000 4.57 0.00 32.87 4.75
2582 2958 6.094048 TCTCAAGACAAGTTTGCTTATATGGC 59.906 38.462 0.00 0.00 32.87 4.40
2583 2959 7.615582 TCTCAAGACAAGTTTGCTTATATGG 57.384 36.000 0.00 0.00 32.87 2.74
2584 2960 8.671921 ACATCTCAAGACAAGTTTGCTTATATG 58.328 33.333 0.00 0.00 32.87 1.78
2585 2961 8.671921 CACATCTCAAGACAAGTTTGCTTATAT 58.328 33.333 0.00 0.00 32.87 0.86
2586 2962 7.661437 ACACATCTCAAGACAAGTTTGCTTATA 59.339 33.333 0.00 0.00 32.87 0.98
2587 2963 6.488006 ACACATCTCAAGACAAGTTTGCTTAT 59.512 34.615 0.00 0.00 32.87 1.73
2588 2964 5.822519 ACACATCTCAAGACAAGTTTGCTTA 59.177 36.000 0.00 0.00 32.87 3.09
2589 2965 4.641989 ACACATCTCAAGACAAGTTTGCTT 59.358 37.500 0.00 0.00 34.82 3.91
2590 2966 4.202441 ACACATCTCAAGACAAGTTTGCT 58.798 39.130 0.00 0.00 0.00 3.91
2591 2967 4.558538 ACACATCTCAAGACAAGTTTGC 57.441 40.909 0.00 0.00 0.00 3.68
2592 2968 7.642669 ACATAACACATCTCAAGACAAGTTTG 58.357 34.615 0.00 0.00 0.00 2.93
2593 2969 7.807977 ACATAACACATCTCAAGACAAGTTT 57.192 32.000 0.00 0.00 0.00 2.66
2594 2970 7.807977 AACATAACACATCTCAAGACAAGTT 57.192 32.000 0.00 0.00 0.00 2.66
2595 2971 8.150945 AGTAACATAACACATCTCAAGACAAGT 58.849 33.333 0.00 0.00 0.00 3.16
2596 2972 8.539770 AGTAACATAACACATCTCAAGACAAG 57.460 34.615 0.00 0.00 0.00 3.16
2597 2973 9.639601 CTAGTAACATAACACATCTCAAGACAA 57.360 33.333 0.00 0.00 0.00 3.18
2598 2974 7.759886 GCTAGTAACATAACACATCTCAAGACA 59.240 37.037 0.00 0.00 0.00 3.41
2599 2975 7.976734 AGCTAGTAACATAACACATCTCAAGAC 59.023 37.037 0.00 0.00 0.00 3.01
2600 2976 8.067751 AGCTAGTAACATAACACATCTCAAGA 57.932 34.615 0.00 0.00 0.00 3.02
2601 2977 9.803315 TTAGCTAGTAACATAACACATCTCAAG 57.197 33.333 0.00 0.00 0.00 3.02
2602 2978 9.803315 CTTAGCTAGTAACATAACACATCTCAA 57.197 33.333 0.00 0.00 0.00 3.02
2603 2979 8.967918 ACTTAGCTAGTAACATAACACATCTCA 58.032 33.333 0.00 0.00 34.56 3.27
2604 2980 9.804758 AACTTAGCTAGTAACATAACACATCTC 57.195 33.333 0.00 0.00 35.54 2.75
2609 2985 9.513727 GGAGTAACTTAGCTAGTAACATAACAC 57.486 37.037 0.00 0.00 35.54 3.32
2610 2986 8.689972 GGGAGTAACTTAGCTAGTAACATAACA 58.310 37.037 0.00 0.00 35.54 2.41
2611 2987 8.689972 TGGGAGTAACTTAGCTAGTAACATAAC 58.310 37.037 0.00 0.00 35.54 1.89
2612 2988 8.689972 GTGGGAGTAACTTAGCTAGTAACATAA 58.310 37.037 0.00 0.00 35.54 1.90
2613 2989 8.057623 AGTGGGAGTAACTTAGCTAGTAACATA 58.942 37.037 0.00 0.00 35.54 2.29
2614 2990 6.896307 AGTGGGAGTAACTTAGCTAGTAACAT 59.104 38.462 0.00 0.00 35.54 2.71
2615 2991 6.251471 AGTGGGAGTAACTTAGCTAGTAACA 58.749 40.000 0.00 0.00 35.54 2.41
2616 2992 6.772360 AGTGGGAGTAACTTAGCTAGTAAC 57.228 41.667 0.00 0.00 35.54 2.50
2617 2993 8.277197 TCATAGTGGGAGTAACTTAGCTAGTAA 58.723 37.037 0.00 0.00 35.54 2.24
2618 2994 7.809238 TCATAGTGGGAGTAACTTAGCTAGTA 58.191 38.462 0.00 0.00 35.54 1.82
2619 2995 6.670617 TCATAGTGGGAGTAACTTAGCTAGT 58.329 40.000 0.00 0.00 39.32 2.57
2620 2996 6.773685 ACTCATAGTGGGAGTAACTTAGCTAG 59.226 42.308 0.00 0.00 43.50 3.42
2621 2997 6.670617 ACTCATAGTGGGAGTAACTTAGCTA 58.329 40.000 0.00 0.00 43.50 3.32
2622 2998 5.520751 ACTCATAGTGGGAGTAACTTAGCT 58.479 41.667 0.00 0.00 43.50 3.32
2623 2999 5.855740 ACTCATAGTGGGAGTAACTTAGC 57.144 43.478 0.00 0.00 43.50 3.09
2624 3000 6.016108 GGCTACTCATAGTGGGAGTAACTTAG 60.016 46.154 0.00 0.00 44.69 2.18
2625 3001 5.832060 GGCTACTCATAGTGGGAGTAACTTA 59.168 44.000 0.00 0.00 44.69 2.24
2626 3002 4.650131 GGCTACTCATAGTGGGAGTAACTT 59.350 45.833 0.00 0.00 44.69 2.66
2627 3003 4.079096 AGGCTACTCATAGTGGGAGTAACT 60.079 45.833 0.00 0.00 44.69 2.24
2628 3004 4.216708 AGGCTACTCATAGTGGGAGTAAC 58.783 47.826 0.00 0.00 44.69 2.50
2629 3005 4.537945 AGGCTACTCATAGTGGGAGTAA 57.462 45.455 0.00 0.00 44.69 2.24
2630 3006 4.537945 AAGGCTACTCATAGTGGGAGTA 57.462 45.455 0.00 0.00 43.50 2.59
2631 3007 3.406512 AAGGCTACTCATAGTGGGAGT 57.593 47.619 0.00 0.00 46.71 3.85
2632 3008 5.871396 TTTAAGGCTACTCATAGTGGGAG 57.129 43.478 0.00 0.00 38.36 4.30
2633 3009 5.962031 TCTTTTAAGGCTACTCATAGTGGGA 59.038 40.000 0.00 0.00 0.00 4.37
2634 3010 6.098409 TCTCTTTTAAGGCTACTCATAGTGGG 59.902 42.308 0.00 0.00 0.00 4.61
2635 3011 7.113658 TCTCTTTTAAGGCTACTCATAGTGG 57.886 40.000 0.00 0.00 0.00 4.00
2636 3012 7.704472 CACTCTCTTTTAAGGCTACTCATAGTG 59.296 40.741 0.00 0.00 0.00 2.74
2637 3013 7.616150 TCACTCTCTTTTAAGGCTACTCATAGT 59.384 37.037 0.00 0.00 0.00 2.12
2638 3014 8.001881 TCACTCTCTTTTAAGGCTACTCATAG 57.998 38.462 0.00 0.00 0.00 2.23
2639 3015 7.956328 TCACTCTCTTTTAAGGCTACTCATA 57.044 36.000 0.00 0.00 0.00 2.15
2640 3016 6.859112 TCACTCTCTTTTAAGGCTACTCAT 57.141 37.500 0.00 0.00 0.00 2.90
2641 3017 6.665992 TTCACTCTCTTTTAAGGCTACTCA 57.334 37.500 0.00 0.00 0.00 3.41
2642 3018 9.308318 CTATTTCACTCTCTTTTAAGGCTACTC 57.692 37.037 0.00 0.00 0.00 2.59
2643 3019 7.766738 GCTATTTCACTCTCTTTTAAGGCTACT 59.233 37.037 0.00 0.00 0.00 2.57
2644 3020 7.766738 AGCTATTTCACTCTCTTTTAAGGCTAC 59.233 37.037 0.00 0.00 0.00 3.58
2645 3021 7.852263 AGCTATTTCACTCTCTTTTAAGGCTA 58.148 34.615 0.00 0.00 0.00 3.93
2646 3022 6.716284 AGCTATTTCACTCTCTTTTAAGGCT 58.284 36.000 0.00 0.00 0.00 4.58
2647 3023 6.993786 AGCTATTTCACTCTCTTTTAAGGC 57.006 37.500 0.00 0.00 0.00 4.35
2652 3028 9.520515 TTTGGAATAGCTATTTCACTCTCTTTT 57.479 29.630 24.42 0.00 31.15 2.27
2653 3029 9.171877 CTTTGGAATAGCTATTTCACTCTCTTT 57.828 33.333 24.42 0.00 31.15 2.52
2654 3030 7.281999 GCTTTGGAATAGCTATTTCACTCTCTT 59.718 37.037 24.42 0.00 31.15 2.85
2655 3031 6.765512 GCTTTGGAATAGCTATTTCACTCTCT 59.234 38.462 24.42 0.00 31.15 3.10
2656 3032 6.292596 CGCTTTGGAATAGCTATTTCACTCTC 60.293 42.308 24.42 13.71 36.49 3.20
2657 3033 5.525378 CGCTTTGGAATAGCTATTTCACTCT 59.475 40.000 24.42 0.00 36.49 3.24
2658 3034 5.277538 CCGCTTTGGAATAGCTATTTCACTC 60.278 44.000 24.42 15.46 42.00 3.51
2659 3035 4.576463 CCGCTTTGGAATAGCTATTTCACT 59.424 41.667 24.42 0.48 42.00 3.41
2660 3036 4.574828 TCCGCTTTGGAATAGCTATTTCAC 59.425 41.667 24.42 13.72 46.38 3.18
2661 3037 4.776349 TCCGCTTTGGAATAGCTATTTCA 58.224 39.130 21.46 21.46 46.38 2.69
2674 3050 3.813166 TCTTGAAAGTAACTCCGCTTTGG 59.187 43.478 0.00 0.00 35.35 3.28
2675 3051 4.083802 CCTCTTGAAAGTAACTCCGCTTTG 60.084 45.833 0.00 0.00 35.35 2.77
2676 3052 4.065789 CCTCTTGAAAGTAACTCCGCTTT 58.934 43.478 0.00 0.00 37.60 3.51
2677 3053 3.323979 TCCTCTTGAAAGTAACTCCGCTT 59.676 43.478 0.00 0.00 0.00 4.68
2678 3054 2.897969 TCCTCTTGAAAGTAACTCCGCT 59.102 45.455 0.00 0.00 0.00 5.52
2679 3055 3.314541 TCCTCTTGAAAGTAACTCCGC 57.685 47.619 0.00 0.00 0.00 5.54
2680 3056 4.628074 TGTTCCTCTTGAAAGTAACTCCG 58.372 43.478 0.00 0.00 33.94 4.63
2681 3057 5.820947 TGTTGTTCCTCTTGAAAGTAACTCC 59.179 40.000 0.00 0.00 33.94 3.85
2682 3058 6.920569 TGTTGTTCCTCTTGAAAGTAACTC 57.079 37.500 0.00 0.00 33.94 3.01
2683 3059 7.497925 GATGTTGTTCCTCTTGAAAGTAACT 57.502 36.000 0.00 0.00 33.94 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.