Multiple sequence alignment - TraesCS6A01G330200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G330200 chr6A 100.000 3046 0 0 1 3046 562929162 562932207 0.000000e+00 5626.0
1 TraesCS6A01G330200 chr6A 100.000 688 0 0 3357 4044 562932518 562933205 0.000000e+00 1271.0
2 TraesCS6A01G330200 chr6A 83.133 166 13 7 3674 3825 555172678 555172514 1.960000e-28 137.0
3 TraesCS6A01G330200 chr6B 93.856 1481 61 13 1591 3045 632849380 632850856 0.000000e+00 2204.0
4 TraesCS6A01G330200 chr6B 91.310 794 39 7 835 1624 632848612 632849379 0.000000e+00 1057.0
5 TraesCS6A01G330200 chr6B 81.381 666 78 29 92 746 632847917 632848547 6.030000e-138 501.0
6 TraesCS6A01G330200 chr6B 87.978 183 18 3 3839 4018 632851094 632851275 3.170000e-51 213.0
7 TraesCS6A01G330200 chr6B 92.982 57 4 0 3511 3567 632851031 632851087 2.590000e-12 84.2
8 TraesCS6A01G330200 chr6D 93.581 1480 67 10 1591 3046 419837956 419839431 0.000000e+00 2182.0
9 TraesCS6A01G330200 chr6D 93.467 796 34 8 835 1624 419837172 419837955 0.000000e+00 1166.0
10 TraesCS6A01G330200 chr6D 81.353 547 76 16 3 544 419773777 419774302 4.830000e-114 422.0
11 TraesCS6A01G330200 chr2B 82.222 270 25 15 3577 3827 154843522 154843787 1.140000e-50 211.0
12 TraesCS6A01G330200 chr2B 79.336 271 31 13 3577 3825 198761022 198760755 2.500000e-37 167.0
13 TraesCS6A01G330200 chr2B 79.116 249 31 13 3567 3799 768044577 768044820 7.000000e-33 152.0
14 TraesCS6A01G330200 chr2B 77.895 285 32 14 3568 3827 13178646 13178924 9.060000e-32 148.0
15 TraesCS6A01G330200 chr2B 81.212 165 21 5 3568 3727 42959877 42960036 1.530000e-24 124.0
16 TraesCS6A01G330200 chr2A 81.618 272 31 10 3568 3825 21190757 21191023 1.470000e-49 207.0
17 TraesCS6A01G330200 chr2A 79.412 272 30 15 3577 3825 576065555 576065287 6.950000e-38 169.0
18 TraesCS6A01G330200 chr4B 81.004 279 25 16 3569 3824 658966215 658966488 3.190000e-46 196.0
19 TraesCS6A01G330200 chr4B 80.634 284 28 13 3566 3827 217270683 217270405 1.150000e-45 195.0
20 TraesCS6A01G330200 chr3A 80.212 283 28 19 3568 3827 705777495 705777218 1.920000e-43 187.0
21 TraesCS6A01G330200 chr3A 79.433 282 30 17 3568 3827 57259185 57259460 1.490000e-39 174.0
22 TraesCS6A01G330200 chr1B 80.000 285 29 16 3566 3827 185912796 185913075 6.900000e-43 185.0
23 TraesCS6A01G330200 chr1B 80.000 275 29 15 3577 3829 23028366 23028096 3.210000e-41 180.0
24 TraesCS6A01G330200 chr1B 79.562 274 30 12 3578 3828 537319358 537319088 5.370000e-39 172.0
25 TraesCS6A01G330200 chr5B 79.779 272 29 14 3577 3825 40829696 40829428 1.490000e-39 174.0
26 TraesCS6A01G330200 chr5B 77.000 300 38 15 3560 3832 700580653 700580948 4.210000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G330200 chr6A 562929162 562933205 4043 False 3448.50 5626 100.0000 1 4044 2 chr6A.!!$F1 4043
1 TraesCS6A01G330200 chr6B 632847917 632851275 3358 False 811.84 2204 89.5014 92 4018 5 chr6B.!!$F1 3926
2 TraesCS6A01G330200 chr6D 419837172 419839431 2259 False 1674.00 2182 93.5240 835 3046 2 chr6D.!!$F2 2211
3 TraesCS6A01G330200 chr6D 419773777 419774302 525 False 422.00 422 81.3530 3 544 1 chr6D.!!$F1 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 298 0.031449 GGCTACAACGGCAGCAAAAA 59.969 50.0 0.0 0.0 39.63 1.94 F
315 321 0.032403 TGTTGCTTTGATGGCTGCAC 59.968 50.0 0.5 0.0 35.01 4.57 F
551 563 0.179059 ACACAGCACCACGAATGTCA 60.179 50.0 0.0 0.0 0.00 3.58 F
1412 1499 0.179200 GGCACGCAGATTTACGGTTG 60.179 55.0 0.0 0.0 0.00 3.77 F
1792 1913 0.249120 CTCATGGGTGTGAGGCGTAA 59.751 55.0 0.0 0.0 41.49 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1480 0.179200 CAACCGTAAATCTGCGTGCC 60.179 55.000 0.00 0.0 0.00 5.01 R
1774 1895 0.687920 TTTACGCCTCACACCCATGA 59.312 50.000 0.00 0.0 0.00 3.07 R
2456 2595 4.525912 ATCCTTTGTTGCAATTCCAGTC 57.474 40.909 0.59 0.0 0.00 3.51 R
2989 3146 0.809636 GGTGCCACAACTGCAAAACC 60.810 55.000 0.00 0.0 41.06 3.27 R
3469 3626 0.036875 CCTCCACTCTCCAACCAACC 59.963 60.000 0.00 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.398292 TCCCAGTCCGGAATAGAGATACT 59.602 47.826 5.23 0.00 36.56 2.12
23 24 3.508012 CCCAGTCCGGAATAGAGATACTG 59.492 52.174 5.23 6.43 36.56 2.74
28 29 6.865726 CAGTCCGGAATAGAGATACTGAAATG 59.134 42.308 5.23 0.00 35.93 2.32
39 40 8.879342 AGAGATACTGAAATGGAGAAAATACG 57.121 34.615 0.00 0.00 0.00 3.06
50 51 3.190874 GAGAAAATACGAGGTGCTCCTG 58.809 50.000 13.11 7.33 45.24 3.86
55 56 0.680280 TACGAGGTGCTCCTGTCTCC 60.680 60.000 13.11 0.00 45.24 3.71
74 75 4.410228 TCTCCTAAATGCTTCCATGCTACT 59.590 41.667 0.00 0.00 0.00 2.57
75 76 5.602561 TCTCCTAAATGCTTCCATGCTACTA 59.397 40.000 0.00 0.00 0.00 1.82
76 77 6.099701 TCTCCTAAATGCTTCCATGCTACTAA 59.900 38.462 0.00 0.00 0.00 2.24
77 78 6.291377 TCCTAAATGCTTCCATGCTACTAAG 58.709 40.000 0.00 0.00 0.00 2.18
78 79 6.099701 TCCTAAATGCTTCCATGCTACTAAGA 59.900 38.462 0.00 0.00 0.00 2.10
79 80 6.203723 CCTAAATGCTTCCATGCTACTAAGAC 59.796 42.308 0.00 0.00 0.00 3.01
80 81 4.760530 ATGCTTCCATGCTACTAAGACA 57.239 40.909 0.00 0.00 0.00 3.41
81 82 4.760530 TGCTTCCATGCTACTAAGACAT 57.239 40.909 0.00 0.00 0.00 3.06
82 83 4.445453 TGCTTCCATGCTACTAAGACATG 58.555 43.478 0.00 0.00 37.17 3.21
88 89 3.906720 TGCTACTAAGACATGGAACCC 57.093 47.619 0.00 0.00 0.00 4.11
89 90 2.504175 TGCTACTAAGACATGGAACCCC 59.496 50.000 0.00 0.00 0.00 4.95
90 91 2.772515 GCTACTAAGACATGGAACCCCT 59.227 50.000 0.00 0.00 0.00 4.79
99 100 2.919602 ACATGGAACCCCTAAGACATGT 59.080 45.455 0.00 0.00 42.69 3.21
210 213 7.653311 TGTGAATAATATCTTCATGGTCAGACG 59.347 37.037 0.00 0.00 35.26 4.18
235 238 7.467539 CGGTATGTTTGTTTCCAACTAACTTCA 60.468 37.037 12.85 0.00 44.03 3.02
244 247 3.456644 TCCAACTAACTTCAGGGTTGTCA 59.543 43.478 0.00 0.00 37.80 3.58
292 298 0.031449 GGCTACAACGGCAGCAAAAA 59.969 50.000 0.00 0.00 39.63 1.94
315 321 0.032403 TGTTGCTTTGATGGCTGCAC 59.968 50.000 0.50 0.00 35.01 4.57
342 348 2.930887 GCGTCACCAGCTTGAGTCATAA 60.931 50.000 0.00 0.00 0.00 1.90
419 428 8.594881 TTTTTACAACAAACATGTTCAAGTGT 57.405 26.923 12.39 15.07 32.27 3.55
425 434 6.260870 ACAAACATGTTCAAGTGTTGTACA 57.739 33.333 12.39 0.00 43.48 2.90
429 438 7.561021 AACATGTTCAAGTGTTGTACATACA 57.439 32.000 4.92 9.31 45.83 2.29
468 477 6.311200 TGATGAACTGACATTCATAACACTCG 59.689 38.462 10.95 0.00 46.88 4.18
484 493 1.880027 ACTCGGAGAAACAAATGGTGC 59.120 47.619 12.86 0.00 34.09 5.01
485 494 1.200020 CTCGGAGAAACAAATGGTGCC 59.800 52.381 0.00 0.00 34.09 5.01
527 536 5.722021 ACCTTTTCGGAGCACATATTTTT 57.278 34.783 0.00 0.00 36.31 1.94
548 560 3.617540 TTTTACACAGCACCACGAATG 57.382 42.857 0.00 0.00 0.00 2.67
549 561 2.248280 TTACACAGCACCACGAATGT 57.752 45.000 0.00 0.00 0.00 2.71
550 562 1.790755 TACACAGCACCACGAATGTC 58.209 50.000 0.00 0.00 0.00 3.06
551 563 0.179059 ACACAGCACCACGAATGTCA 60.179 50.000 0.00 0.00 0.00 3.58
552 564 1.159285 CACAGCACCACGAATGTCAT 58.841 50.000 0.00 0.00 0.00 3.06
553 565 1.536766 CACAGCACCACGAATGTCATT 59.463 47.619 0.00 0.00 0.00 2.57
554 566 2.030893 CACAGCACCACGAATGTCATTT 60.031 45.455 0.00 0.00 0.00 2.32
555 567 2.622942 ACAGCACCACGAATGTCATTTT 59.377 40.909 0.00 0.00 0.00 1.82
581 593 7.984422 TCACCTAAATGTATATGAATGCAGG 57.016 36.000 0.00 0.00 30.77 4.85
583 595 7.661437 TCACCTAAATGTATATGAATGCAGGAC 59.339 37.037 0.00 0.00 30.77 3.85
584 596 7.445096 CACCTAAATGTATATGAATGCAGGACA 59.555 37.037 0.00 0.00 30.77 4.02
585 597 7.445402 ACCTAAATGTATATGAATGCAGGACAC 59.555 37.037 0.00 0.00 30.77 3.67
586 598 7.663081 CCTAAATGTATATGAATGCAGGACACT 59.337 37.037 0.00 0.00 30.77 3.55
587 599 7.502120 AAATGTATATGAATGCAGGACACTC 57.498 36.000 0.00 0.00 30.77 3.51
588 600 5.612725 TGTATATGAATGCAGGACACTCA 57.387 39.130 0.00 0.00 39.18 3.41
589 601 5.988287 TGTATATGAATGCAGGACACTCAA 58.012 37.500 0.00 0.00 38.17 3.02
590 602 6.594744 TGTATATGAATGCAGGACACTCAAT 58.405 36.000 0.00 0.00 38.17 2.57
591 603 7.056006 TGTATATGAATGCAGGACACTCAATT 58.944 34.615 0.00 0.00 38.17 2.32
592 604 4.978083 ATGAATGCAGGACACTCAATTC 57.022 40.909 0.00 0.00 38.17 2.17
593 605 4.025040 TGAATGCAGGACACTCAATTCT 57.975 40.909 0.00 0.00 30.01 2.40
594 606 3.754850 TGAATGCAGGACACTCAATTCTG 59.245 43.478 0.00 0.00 30.01 3.02
595 607 2.936919 TGCAGGACACTCAATTCTGT 57.063 45.000 0.00 0.00 0.00 3.41
596 608 3.213206 TGCAGGACACTCAATTCTGTT 57.787 42.857 0.00 0.00 0.00 3.16
597 609 3.554934 TGCAGGACACTCAATTCTGTTT 58.445 40.909 0.00 0.00 0.00 2.83
598 610 3.316029 TGCAGGACACTCAATTCTGTTTG 59.684 43.478 0.00 0.00 0.00 2.93
599 611 3.304928 GCAGGACACTCAATTCTGTTTGG 60.305 47.826 0.00 0.00 0.00 3.28
600 612 2.887152 AGGACACTCAATTCTGTTTGGC 59.113 45.455 0.00 0.00 0.00 4.52
601 613 2.622942 GGACACTCAATTCTGTTTGGCA 59.377 45.455 0.00 0.00 0.00 4.92
604 616 5.083533 ACACTCAATTCTGTTTGGCAAAA 57.916 34.783 15.29 0.00 0.00 2.44
608 620 5.754890 ACTCAATTCTGTTTGGCAAAATGAC 59.245 36.000 15.29 3.32 0.00 3.06
618 630 7.271511 TGTTTGGCAAAATGACTTTTCAGTAT 58.728 30.769 15.29 0.00 34.35 2.12
622 634 8.729805 TGGCAAAATGACTTTTCAGTATTTTT 57.270 26.923 0.00 0.00 34.35 1.94
677 689 7.611770 AGGGGAAAATTTAATGTTTACTGAGC 58.388 34.615 0.00 0.00 0.00 4.26
678 690 7.454694 AGGGGAAAATTTAATGTTTACTGAGCT 59.545 33.333 0.00 0.00 0.00 4.09
680 692 8.925700 GGGAAAATTTAATGTTTACTGAGCTTG 58.074 33.333 0.00 0.00 0.00 4.01
681 693 8.925700 GGAAAATTTAATGTTTACTGAGCTTGG 58.074 33.333 0.00 0.00 0.00 3.61
713 754 1.923395 CTGTCCCCAGGCCCACTTA 60.923 63.158 0.00 0.00 34.90 2.24
717 758 2.316586 CCCCAGGCCCACTTACCAT 61.317 63.158 0.00 0.00 0.00 3.55
761 836 3.131396 CACACAACCAGACTACTTCACC 58.869 50.000 0.00 0.00 0.00 4.02
768 843 1.620819 CAGACTACTTCACCTGCACCT 59.379 52.381 0.00 0.00 0.00 4.00
769 844 2.037772 CAGACTACTTCACCTGCACCTT 59.962 50.000 0.00 0.00 0.00 3.50
770 845 2.300437 AGACTACTTCACCTGCACCTTC 59.700 50.000 0.00 0.00 0.00 3.46
771 846 2.037251 GACTACTTCACCTGCACCTTCA 59.963 50.000 0.00 0.00 0.00 3.02
772 847 2.037772 ACTACTTCACCTGCACCTTCAG 59.962 50.000 0.00 0.00 0.00 3.02
773 848 0.536006 ACTTCACCTGCACCTTCAGC 60.536 55.000 0.00 0.00 32.87 4.26
775 850 3.052082 CACCTGCACCTTCAGCCG 61.052 66.667 0.00 0.00 32.87 5.52
781 856 3.399181 CACCTTCAGCCGCCCCTA 61.399 66.667 0.00 0.00 0.00 3.53
782 857 2.609610 ACCTTCAGCCGCCCCTAA 60.610 61.111 0.00 0.00 0.00 2.69
783 858 2.228480 ACCTTCAGCCGCCCCTAAA 61.228 57.895 0.00 0.00 0.00 1.85
784 859 1.001393 CCTTCAGCCGCCCCTAAAA 60.001 57.895 0.00 0.00 0.00 1.52
785 860 0.610785 CCTTCAGCCGCCCCTAAAAA 60.611 55.000 0.00 0.00 0.00 1.94
802 877 1.733526 AAAAACGTGCACCCTCAGC 59.266 52.632 12.15 0.00 0.00 4.26
803 878 1.734388 AAAAACGTGCACCCTCAGCC 61.734 55.000 12.15 0.00 0.00 4.85
804 879 4.988598 AACGTGCACCCTCAGCCG 62.989 66.667 12.15 0.00 33.79 5.52
806 881 4.680237 CGTGCACCCTCAGCCGAA 62.680 66.667 12.15 0.00 0.00 4.30
807 882 2.743928 GTGCACCCTCAGCCGAAG 60.744 66.667 5.22 0.00 0.00 3.79
808 883 3.241530 TGCACCCTCAGCCGAAGT 61.242 61.111 0.00 0.00 0.00 3.01
809 884 1.911269 TGCACCCTCAGCCGAAGTA 60.911 57.895 0.00 0.00 0.00 2.24
810 885 1.295423 GCACCCTCAGCCGAAGTAA 59.705 57.895 0.00 0.00 0.00 2.24
811 886 0.321298 GCACCCTCAGCCGAAGTAAA 60.321 55.000 0.00 0.00 0.00 2.01
812 887 1.726853 CACCCTCAGCCGAAGTAAAG 58.273 55.000 0.00 0.00 0.00 1.85
813 888 1.275291 CACCCTCAGCCGAAGTAAAGA 59.725 52.381 0.00 0.00 0.00 2.52
814 889 1.975680 ACCCTCAGCCGAAGTAAAGAA 59.024 47.619 0.00 0.00 0.00 2.52
815 890 2.572104 ACCCTCAGCCGAAGTAAAGAAT 59.428 45.455 0.00 0.00 0.00 2.40
816 891 3.009143 ACCCTCAGCCGAAGTAAAGAATT 59.991 43.478 0.00 0.00 0.00 2.17
817 892 4.010349 CCCTCAGCCGAAGTAAAGAATTT 58.990 43.478 0.00 0.00 43.42 1.82
818 893 4.142600 CCCTCAGCCGAAGTAAAGAATTTG 60.143 45.833 0.00 0.00 39.63 2.32
819 894 4.406943 CTCAGCCGAAGTAAAGAATTTGC 58.593 43.478 0.00 0.00 39.63 3.68
852 927 7.761038 AAAACCGAAGTAAAGAATTCCAGAT 57.239 32.000 0.65 0.00 0.00 2.90
853 928 8.857694 AAAACCGAAGTAAAGAATTCCAGATA 57.142 30.769 0.65 0.00 0.00 1.98
880 955 1.300697 GCTTATCCCCCGTAGCACG 60.301 63.158 2.27 2.27 42.11 5.34
937 1012 2.740055 CCCACACGACTGCAGCTC 60.740 66.667 15.27 9.81 0.00 4.09
938 1013 2.740055 CCACACGACTGCAGCTCC 60.740 66.667 15.27 2.18 0.00 4.70
939 1014 2.740055 CACACGACTGCAGCTCCC 60.740 66.667 15.27 0.00 0.00 4.30
940 1015 2.919856 ACACGACTGCAGCTCCCT 60.920 61.111 15.27 0.00 0.00 4.20
941 1016 2.125753 CACGACTGCAGCTCCCTC 60.126 66.667 15.27 1.97 0.00 4.30
942 1017 3.386237 ACGACTGCAGCTCCCTCC 61.386 66.667 15.27 0.00 0.00 4.30
1214 1297 1.217882 GCCGTCAAGGTAATCCATCG 58.782 55.000 0.00 0.00 43.70 3.84
1249 1336 4.944317 CCTCGTGCTCCATACAGATAGATA 59.056 45.833 0.00 0.00 0.00 1.98
1250 1337 5.065859 CCTCGTGCTCCATACAGATAGATAG 59.934 48.000 0.00 0.00 0.00 2.08
1251 1338 5.805728 TCGTGCTCCATACAGATAGATAGA 58.194 41.667 0.00 0.00 0.00 1.98
1252 1339 6.418946 TCGTGCTCCATACAGATAGATAGAT 58.581 40.000 0.00 0.00 0.00 1.98
1255 1342 7.488322 GTGCTCCATACAGATAGATAGATTCC 58.512 42.308 0.00 0.00 0.00 3.01
1260 1347 7.123397 TCCATACAGATAGATAGATTCCACTGC 59.877 40.741 0.00 0.00 0.00 4.40
1272 1359 2.023741 CACTGCGCGATGGATTGC 59.976 61.111 12.10 0.00 0.00 3.56
1285 1372 5.855395 GCGATGGATTGCTTTCATTTATCTC 59.145 40.000 0.00 0.00 34.31 2.75
1316 1403 7.358765 CGATAATCTGGACGAATCAAGTTGATC 60.359 40.741 18.52 7.20 35.76 2.92
1325 1412 1.705256 TCAAGTTGATCACGCGGTAC 58.295 50.000 12.47 0.00 0.00 3.34
1326 1413 1.271379 TCAAGTTGATCACGCGGTACT 59.729 47.619 12.47 0.97 0.00 2.73
1327 1414 2.488937 TCAAGTTGATCACGCGGTACTA 59.511 45.455 12.47 0.00 0.00 1.82
1328 1415 2.846039 AGTTGATCACGCGGTACTAG 57.154 50.000 12.47 0.00 0.00 2.57
1329 1416 2.362736 AGTTGATCACGCGGTACTAGA 58.637 47.619 12.47 0.00 0.00 2.43
1330 1417 2.950309 AGTTGATCACGCGGTACTAGAT 59.050 45.455 12.47 3.55 0.00 1.98
1331 1418 3.380637 AGTTGATCACGCGGTACTAGATT 59.619 43.478 12.47 0.00 0.00 2.40
1332 1419 4.110482 GTTGATCACGCGGTACTAGATTT 58.890 43.478 12.47 0.00 0.00 2.17
1333 1420 3.702330 TGATCACGCGGTACTAGATTTG 58.298 45.455 12.47 0.00 0.00 2.32
1376 1463 0.538287 AGAGGTCCTGGTTTTGCTGC 60.538 55.000 0.00 0.00 0.00 5.25
1412 1499 0.179200 GGCACGCAGATTTACGGTTG 60.179 55.000 0.00 0.00 0.00 3.77
1470 1557 6.098838 AGTGCTCATATGGTTCAGTCTATTCA 59.901 38.462 2.13 0.00 0.00 2.57
1536 1623 4.342862 TGGTTCTAGAATATCTGGCTGC 57.657 45.455 8.75 0.00 0.00 5.25
1580 1667 2.531206 GCTCTTTAAGTCGATGACGCT 58.469 47.619 0.00 0.00 37.67 5.07
1613 1700 5.465935 GGTCCGATGAGATCACTAGATTTC 58.534 45.833 0.00 0.00 36.26 2.17
1623 1744 9.206690 TGAGATCACTAGATTTCTCTGGTTAAT 57.793 33.333 16.07 0.00 39.98 1.40
1735 1856 1.833630 TGATTCGGCTCACAGGATTCT 59.166 47.619 0.00 0.00 0.00 2.40
1791 1912 0.613572 TCTCATGGGTGTGAGGCGTA 60.614 55.000 0.00 0.00 44.51 4.42
1792 1913 0.249120 CTCATGGGTGTGAGGCGTAA 59.751 55.000 0.00 0.00 41.49 3.18
1914 2037 8.011673 CACATTTGATGCTACTTTATATGGACG 58.988 37.037 0.00 0.00 0.00 4.79
1989 2112 5.826208 TGATCAGATATATTGCATCCATGGC 59.174 40.000 6.96 0.00 0.00 4.40
2057 2180 7.771183 TCAGATGTTTTACCCATATTTTCTGC 58.229 34.615 0.00 0.00 0.00 4.26
2126 2249 4.406972 ACTTAGTCCTGCAGCTGATGAATA 59.593 41.667 20.43 10.51 0.00 1.75
2138 2261 6.636044 GCAGCTGATGAATAAATGTTAGCTTC 59.364 38.462 20.43 0.00 38.11 3.86
2166 2289 5.070313 TCATTAAGAACTTGGCCAGCTTTTT 59.930 36.000 5.11 5.56 0.00 1.94
2195 2326 8.565896 TTACTCATCAAGACAATTTGCAGTAT 57.434 30.769 0.00 0.00 0.00 2.12
2205 2336 9.461312 AAGACAATTTGCAGTATAATAGTGGAA 57.539 29.630 0.00 0.00 37.61 3.53
2342 2481 5.767816 ACACCTTACATGAAAGTGGAAAC 57.232 39.130 0.00 0.00 0.00 2.78
2343 2482 5.197451 ACACCTTACATGAAAGTGGAAACA 58.803 37.500 0.00 0.00 38.70 2.83
2456 2595 7.348201 GCGTATCTGTAAATCTTGATTGGAAG 58.652 38.462 0.00 0.00 0.00 3.46
2489 2628 4.500375 GCAACAAAGGATTGGGATGCTATC 60.500 45.833 8.18 0.00 41.01 2.08
2558 2697 2.681778 AGTCAGGTCTCGCTGGGG 60.682 66.667 0.00 0.00 0.00 4.96
2663 2805 2.299013 TGAAGTGGCTGTACAGTCGATT 59.701 45.455 21.86 18.00 35.37 3.34
2707 2849 0.312102 GCAAGGCAAGTCTTCCACAC 59.688 55.000 0.00 0.00 0.00 3.82
2786 2928 3.923017 AAGCTTTTGGTGTATGACTGC 57.077 42.857 0.00 0.00 0.00 4.40
2787 2929 3.146104 AGCTTTTGGTGTATGACTGCT 57.854 42.857 0.00 0.00 0.00 4.24
2791 2933 3.769739 TTTGGTGTATGACTGCTGTCT 57.230 42.857 22.31 11.73 43.29 3.41
2804 2946 2.086869 TGCTGTCTGCTAGAAAATGGC 58.913 47.619 0.00 0.00 43.37 4.40
2824 2966 2.096218 GCTAACACTTGTCCTGAAAGCG 60.096 50.000 0.00 0.00 0.00 4.68
2833 2975 1.205064 CCTGAAAGCGCTTGTGACG 59.795 57.895 25.80 10.50 0.00 4.35
2885 3042 1.970114 CAGCCAGTGACTGCCTTGG 60.970 63.158 7.16 0.00 0.00 3.61
2989 3146 3.097728 GTCTGCGTCGTGGTGTCG 61.098 66.667 0.00 0.00 0.00 4.35
3393 3550 5.766150 TTCTTCATGTTTGGTTCGAACAT 57.234 34.783 28.24 11.99 45.91 2.71
3416 3573 2.534298 CACGCTAGTGGAGAACTCATG 58.466 52.381 8.42 0.00 44.34 3.07
3430 3587 3.165058 ACTCATGGCATGTACTGTACG 57.835 47.619 25.62 8.69 0.00 3.67
3439 3596 4.272504 GGCATGTACTGTACGCAATGTAAT 59.727 41.667 16.16 0.29 34.07 1.89
3440 3597 5.432157 GCATGTACTGTACGCAATGTAATC 58.568 41.667 12.87 0.00 34.07 1.75
3449 3606 4.818534 ACGCAATGTAATCATGATCCAC 57.181 40.909 9.06 10.66 34.19 4.02
3457 3614 6.252599 TGTAATCATGATCCACTTTAGCCT 57.747 37.500 9.06 0.00 0.00 4.58
3468 3625 8.052748 TGATCCACTTTAGCCTTGTTGTATTAT 58.947 33.333 0.00 0.00 0.00 1.28
3469 3626 7.624360 TCCACTTTAGCCTTGTTGTATTATG 57.376 36.000 0.00 0.00 0.00 1.90
3471 3628 6.377146 CCACTTTAGCCTTGTTGTATTATGGT 59.623 38.462 0.00 0.00 0.00 3.55
3473 3630 7.754924 CACTTTAGCCTTGTTGTATTATGGTTG 59.245 37.037 0.00 0.00 0.00 3.77
3475 3632 4.672899 AGCCTTGTTGTATTATGGTTGGT 58.327 39.130 0.00 0.00 0.00 3.67
3476 3633 5.083821 AGCCTTGTTGTATTATGGTTGGTT 58.916 37.500 0.00 0.00 0.00 3.67
3477 3634 5.047377 AGCCTTGTTGTATTATGGTTGGTTG 60.047 40.000 0.00 0.00 0.00 3.77
3478 3635 5.719173 CCTTGTTGTATTATGGTTGGTTGG 58.281 41.667 0.00 0.00 0.00 3.77
3479 3636 5.478679 CCTTGTTGTATTATGGTTGGTTGGA 59.521 40.000 0.00 0.00 0.00 3.53
3480 3637 6.350110 CCTTGTTGTATTATGGTTGGTTGGAG 60.350 42.308 0.00 0.00 0.00 3.86
3481 3638 5.882040 TGTTGTATTATGGTTGGTTGGAGA 58.118 37.500 0.00 0.00 0.00 3.71
3482 3639 5.943416 TGTTGTATTATGGTTGGTTGGAGAG 59.057 40.000 0.00 0.00 0.00 3.20
3483 3640 5.772393 TGTATTATGGTTGGTTGGAGAGT 57.228 39.130 0.00 0.00 0.00 3.24
3484 3641 5.496556 TGTATTATGGTTGGTTGGAGAGTG 58.503 41.667 0.00 0.00 0.00 3.51
3485 3642 3.433306 TTATGGTTGGTTGGAGAGTGG 57.567 47.619 0.00 0.00 0.00 4.00
3486 3643 1.444933 ATGGTTGGTTGGAGAGTGGA 58.555 50.000 0.00 0.00 0.00 4.02
3487 3644 0.764890 TGGTTGGTTGGAGAGTGGAG 59.235 55.000 0.00 0.00 0.00 3.86
3488 3645 0.036875 GGTTGGTTGGAGAGTGGAGG 59.963 60.000 0.00 0.00 0.00 4.30
3489 3646 0.606673 GTTGGTTGGAGAGTGGAGGC 60.607 60.000 0.00 0.00 0.00 4.70
3490 3647 1.059584 TTGGTTGGAGAGTGGAGGCA 61.060 55.000 0.00 0.00 0.00 4.75
3491 3648 0.842030 TGGTTGGAGAGTGGAGGCAT 60.842 55.000 0.00 0.00 0.00 4.40
3492 3649 0.393537 GGTTGGAGAGTGGAGGCATG 60.394 60.000 0.00 0.00 0.00 4.06
3493 3650 1.028868 GTTGGAGAGTGGAGGCATGC 61.029 60.000 9.90 9.90 0.00 4.06
3494 3651 2.191641 GGAGAGTGGAGGCATGCC 59.808 66.667 30.12 30.12 0.00 4.40
3495 3652 2.202987 GAGAGTGGAGGCATGCCG 60.203 66.667 30.50 0.00 41.95 5.69
3496 3653 2.685017 AGAGTGGAGGCATGCCGA 60.685 61.111 30.50 16.13 41.95 5.54
3497 3654 2.244117 GAGAGTGGAGGCATGCCGAA 62.244 60.000 30.50 17.37 41.95 4.30
3498 3655 1.817099 GAGTGGAGGCATGCCGAAG 60.817 63.158 30.50 0.00 41.95 3.79
3499 3656 2.045926 GTGGAGGCATGCCGAAGT 60.046 61.111 30.50 14.00 41.95 3.01
3500 3657 1.220749 GTGGAGGCATGCCGAAGTA 59.779 57.895 30.50 13.90 41.95 2.24
3501 3658 0.179045 GTGGAGGCATGCCGAAGTAT 60.179 55.000 30.50 12.74 41.95 2.12
3502 3659 1.070134 GTGGAGGCATGCCGAAGTATA 59.930 52.381 30.50 11.42 41.95 1.47
3503 3660 1.070134 TGGAGGCATGCCGAAGTATAC 59.930 52.381 30.50 13.85 41.95 1.47
3504 3661 1.608283 GGAGGCATGCCGAAGTATACC 60.608 57.143 30.50 18.82 41.95 2.73
3505 3662 1.070134 GAGGCATGCCGAAGTATACCA 59.930 52.381 30.50 0.00 41.95 3.25
3506 3663 1.699634 AGGCATGCCGAAGTATACCAT 59.300 47.619 30.50 5.94 41.95 3.55
3507 3664 1.806542 GGCATGCCGAAGTATACCATG 59.193 52.381 23.48 12.23 37.07 3.66
3508 3665 2.494059 GCATGCCGAAGTATACCATGT 58.506 47.619 6.36 0.00 36.54 3.21
3509 3666 2.480419 GCATGCCGAAGTATACCATGTC 59.520 50.000 6.36 8.31 36.54 3.06
3531 3688 7.732025 TGTCTTGGTGTGTTCTTTCTATCTTA 58.268 34.615 0.00 0.00 0.00 2.10
3532 3689 7.872993 TGTCTTGGTGTGTTCTTTCTATCTTAG 59.127 37.037 0.00 0.00 0.00 2.18
3561 3718 6.599244 TGGTCTTGTCCATCTTTTGTATCATC 59.401 38.462 0.00 0.00 31.96 2.92
3567 3724 7.726216 TGTCCATCTTTTGTATCATCGATACT 58.274 34.615 13.66 0.00 43.56 2.12
3569 3726 9.692749 GTCCATCTTTTGTATCATCGATACTTA 57.307 33.333 13.66 1.95 43.56 2.24
3570 3727 9.914131 TCCATCTTTTGTATCATCGATACTTAG 57.086 33.333 13.66 8.94 43.56 2.18
3571 3728 9.144747 CCATCTTTTGTATCATCGATACTTAGG 57.855 37.037 13.66 4.59 43.56 2.69
3572 3729 9.144747 CATCTTTTGTATCATCGATACTTAGGG 57.855 37.037 13.66 3.42 43.56 3.53
3573 3730 7.152645 TCTTTTGTATCATCGATACTTAGGGC 58.847 38.462 13.66 0.00 43.56 5.19
3574 3731 6.413783 TTTGTATCATCGATACTTAGGGCA 57.586 37.500 13.66 0.00 43.56 5.36
3575 3732 6.605471 TTGTATCATCGATACTTAGGGCAT 57.395 37.500 13.66 0.00 43.56 4.40
3576 3733 7.712204 TTGTATCATCGATACTTAGGGCATA 57.288 36.000 13.66 0.00 43.56 3.14
3577 3734 7.898014 TGTATCATCGATACTTAGGGCATAT 57.102 36.000 13.66 0.00 43.56 1.78
3578 3735 7.716612 TGTATCATCGATACTTAGGGCATATG 58.283 38.462 13.66 0.00 43.56 1.78
3579 3736 6.798427 ATCATCGATACTTAGGGCATATGT 57.202 37.500 4.29 3.22 0.00 2.29
3580 3737 7.898014 ATCATCGATACTTAGGGCATATGTA 57.102 36.000 4.29 7.27 0.00 2.29
3581 3738 7.096884 TCATCGATACTTAGGGCATATGTAC 57.903 40.000 7.02 0.00 29.54 2.90
3582 3739 6.661805 TCATCGATACTTAGGGCATATGTACA 59.338 38.462 7.02 0.00 29.54 2.90
3583 3740 6.904463 TCGATACTTAGGGCATATGTACAA 57.096 37.500 0.00 0.00 29.54 2.41
3584 3741 7.476540 TCGATACTTAGGGCATATGTACAAT 57.523 36.000 0.00 0.00 29.54 2.71
3585 3742 7.320399 TCGATACTTAGGGCATATGTACAATG 58.680 38.462 0.00 6.65 29.54 2.82
3586 3743 6.535150 CGATACTTAGGGCATATGTACAATGG 59.465 42.308 0.00 0.00 29.54 3.16
3587 3744 5.646692 ACTTAGGGCATATGTACAATGGT 57.353 39.130 0.00 0.00 0.00 3.55
3588 3745 6.013554 ACTTAGGGCATATGTACAATGGTT 57.986 37.500 0.00 0.00 0.00 3.67
3589 3746 6.062095 ACTTAGGGCATATGTACAATGGTTC 58.938 40.000 0.00 0.00 0.00 3.62
3590 3747 4.796110 AGGGCATATGTACAATGGTTCT 57.204 40.909 0.00 0.00 0.00 3.01
3591 3748 5.904984 AGGGCATATGTACAATGGTTCTA 57.095 39.130 0.00 0.00 0.00 2.10
3592 3749 6.454223 AGGGCATATGTACAATGGTTCTAT 57.546 37.500 0.00 0.00 0.00 1.98
3593 3750 6.476378 AGGGCATATGTACAATGGTTCTATC 58.524 40.000 0.00 0.00 0.00 2.08
3594 3751 6.273260 AGGGCATATGTACAATGGTTCTATCT 59.727 38.462 0.00 0.00 0.00 1.98
3595 3752 6.942576 GGGCATATGTACAATGGTTCTATCTT 59.057 38.462 0.00 0.00 0.00 2.40
3596 3753 8.100791 GGGCATATGTACAATGGTTCTATCTTA 58.899 37.037 0.00 0.00 0.00 2.10
3597 3754 9.155975 GGCATATGTACAATGGTTCTATCTTAG 57.844 37.037 0.00 0.00 0.00 2.18
3598 3755 9.155975 GCATATGTACAATGGTTCTATCTTAGG 57.844 37.037 0.00 0.00 0.00 2.69
3601 3758 7.973048 TGTACAATGGTTCTATCTTAGGAGT 57.027 36.000 0.00 0.00 0.00 3.85
3602 3759 7.782049 TGTACAATGGTTCTATCTTAGGAGTG 58.218 38.462 0.00 0.00 0.00 3.51
3603 3760 6.875972 ACAATGGTTCTATCTTAGGAGTGT 57.124 37.500 0.00 0.00 0.00 3.55
3604 3761 6.879400 ACAATGGTTCTATCTTAGGAGTGTC 58.121 40.000 0.00 0.00 0.00 3.67
3605 3762 6.440647 ACAATGGTTCTATCTTAGGAGTGTCA 59.559 38.462 0.00 0.00 0.00 3.58
3606 3763 7.126421 ACAATGGTTCTATCTTAGGAGTGTCAT 59.874 37.037 0.00 0.00 0.00 3.06
3607 3764 6.471233 TGGTTCTATCTTAGGAGTGTCATG 57.529 41.667 0.00 0.00 0.00 3.07
3608 3765 5.958380 TGGTTCTATCTTAGGAGTGTCATGT 59.042 40.000 0.00 0.00 0.00 3.21
3609 3766 7.123383 TGGTTCTATCTTAGGAGTGTCATGTA 58.877 38.462 0.00 0.00 0.00 2.29
3610 3767 7.285629 TGGTTCTATCTTAGGAGTGTCATGTAG 59.714 40.741 0.00 0.00 0.00 2.74
3611 3768 7.255660 GGTTCTATCTTAGGAGTGTCATGTAGG 60.256 44.444 0.00 0.00 0.00 3.18
3612 3769 7.150447 TCTATCTTAGGAGTGTCATGTAGGA 57.850 40.000 0.00 0.00 0.00 2.94
3613 3770 7.760607 TCTATCTTAGGAGTGTCATGTAGGAT 58.239 38.462 0.00 0.00 0.00 3.24
3614 3771 8.891501 TCTATCTTAGGAGTGTCATGTAGGATA 58.108 37.037 0.00 0.00 0.00 2.59
3615 3772 9.521841 CTATCTTAGGAGTGTCATGTAGGATAA 57.478 37.037 0.00 0.00 0.00 1.75
3616 3773 8.783660 ATCTTAGGAGTGTCATGTAGGATAAA 57.216 34.615 0.00 0.00 0.00 1.40
3617 3774 8.783660 TCTTAGGAGTGTCATGTAGGATAAAT 57.216 34.615 0.00 0.00 0.00 1.40
3618 3775 8.642432 TCTTAGGAGTGTCATGTAGGATAAATG 58.358 37.037 0.00 0.00 37.65 2.32
3619 3776 5.615289 AGGAGTGTCATGTAGGATAAATGC 58.385 41.667 0.00 0.00 36.21 3.56
3620 3777 5.367937 AGGAGTGTCATGTAGGATAAATGCT 59.632 40.000 0.00 0.00 36.21 3.79
3621 3778 5.468072 GGAGTGTCATGTAGGATAAATGCTG 59.532 44.000 0.00 0.00 36.21 4.41
3622 3779 5.371526 AGTGTCATGTAGGATAAATGCTGG 58.628 41.667 0.00 0.00 36.21 4.85
3623 3780 4.516698 GTGTCATGTAGGATAAATGCTGGG 59.483 45.833 0.00 0.00 36.21 4.45
3624 3781 4.074970 GTCATGTAGGATAAATGCTGGGG 58.925 47.826 0.00 0.00 36.21 4.96
3625 3782 3.721575 TCATGTAGGATAAATGCTGGGGT 59.278 43.478 0.00 0.00 36.21 4.95
3626 3783 3.576078 TGTAGGATAAATGCTGGGGTG 57.424 47.619 0.00 0.00 0.00 4.61
3627 3784 3.119319 TGTAGGATAAATGCTGGGGTGA 58.881 45.455 0.00 0.00 0.00 4.02
3628 3785 3.525609 TGTAGGATAAATGCTGGGGTGAA 59.474 43.478 0.00 0.00 0.00 3.18
3629 3786 3.303351 AGGATAAATGCTGGGGTGAAG 57.697 47.619 0.00 0.00 0.00 3.02
3630 3787 2.091665 AGGATAAATGCTGGGGTGAAGG 60.092 50.000 0.00 0.00 0.00 3.46
3631 3788 2.310538 GATAAATGCTGGGGTGAAGGG 58.689 52.381 0.00 0.00 0.00 3.95
3632 3789 0.334676 TAAATGCTGGGGTGAAGGGG 59.665 55.000 0.00 0.00 0.00 4.79
3633 3790 1.442886 AAATGCTGGGGTGAAGGGGA 61.443 55.000 0.00 0.00 0.00 4.81
3634 3791 1.867595 AATGCTGGGGTGAAGGGGAG 61.868 60.000 0.00 0.00 0.00 4.30
3635 3792 2.610859 GCTGGGGTGAAGGGGAGA 60.611 66.667 0.00 0.00 0.00 3.71
3636 3793 2.674220 GCTGGGGTGAAGGGGAGAG 61.674 68.421 0.00 0.00 0.00 3.20
3637 3794 1.081092 CTGGGGTGAAGGGGAGAGA 59.919 63.158 0.00 0.00 0.00 3.10
3638 3795 0.980231 CTGGGGTGAAGGGGAGAGAG 60.980 65.000 0.00 0.00 0.00 3.20
3639 3796 1.392534 GGGGTGAAGGGGAGAGAGA 59.607 63.158 0.00 0.00 0.00 3.10
3640 3797 0.252742 GGGGTGAAGGGGAGAGAGAA 60.253 60.000 0.00 0.00 0.00 2.87
3641 3798 1.657804 GGGTGAAGGGGAGAGAGAAA 58.342 55.000 0.00 0.00 0.00 2.52
3642 3799 2.200955 GGGTGAAGGGGAGAGAGAAAT 58.799 52.381 0.00 0.00 0.00 2.17
3643 3800 2.171659 GGGTGAAGGGGAGAGAGAAATC 59.828 54.545 0.00 0.00 0.00 2.17
3644 3801 2.840651 GGTGAAGGGGAGAGAGAAATCA 59.159 50.000 0.00 0.00 0.00 2.57
3645 3802 3.457749 GGTGAAGGGGAGAGAGAAATCAT 59.542 47.826 0.00 0.00 0.00 2.45
3646 3803 4.656112 GGTGAAGGGGAGAGAGAAATCATA 59.344 45.833 0.00 0.00 0.00 2.15
3647 3804 5.131142 GGTGAAGGGGAGAGAGAAATCATAA 59.869 44.000 0.00 0.00 0.00 1.90
3648 3805 6.287525 GTGAAGGGGAGAGAGAAATCATAAG 58.712 44.000 0.00 0.00 0.00 1.73
3649 3806 5.966935 TGAAGGGGAGAGAGAAATCATAAGT 59.033 40.000 0.00 0.00 0.00 2.24
3650 3807 7.070074 GTGAAGGGGAGAGAGAAATCATAAGTA 59.930 40.741 0.00 0.00 0.00 2.24
3651 3808 7.623677 TGAAGGGGAGAGAGAAATCATAAGTAA 59.376 37.037 0.00 0.00 0.00 2.24
3652 3809 7.996758 AGGGGAGAGAGAAATCATAAGTAAA 57.003 36.000 0.00 0.00 0.00 2.01
3653 3810 8.574309 AGGGGAGAGAGAAATCATAAGTAAAT 57.426 34.615 0.00 0.00 0.00 1.40
3654 3811 8.435982 AGGGGAGAGAGAAATCATAAGTAAATG 58.564 37.037 0.00 0.00 0.00 2.32
3655 3812 7.174080 GGGGAGAGAGAAATCATAAGTAAATGC 59.826 40.741 0.00 0.00 0.00 3.56
3656 3813 7.936301 GGGAGAGAGAAATCATAAGTAAATGCT 59.064 37.037 0.00 0.00 0.00 3.79
3657 3814 9.336171 GGAGAGAGAAATCATAAGTAAATGCTT 57.664 33.333 0.00 0.00 0.00 3.91
3659 3816 9.678260 AGAGAGAAATCATAAGTAAATGCTTGT 57.322 29.630 0.00 0.00 0.00 3.16
3660 3817 9.928236 GAGAGAAATCATAAGTAAATGCTTGTC 57.072 33.333 0.00 0.00 0.00 3.18
3661 3818 9.678260 AGAGAAATCATAAGTAAATGCTTGTCT 57.322 29.630 0.00 0.00 0.00 3.41
3697 3854 9.809096 TTAAGAGATGATCTGTTAACATGTCTC 57.191 33.333 17.64 15.38 41.46 3.36
3698 3855 7.415592 AGAGATGATCTGTTAACATGTCTCA 57.584 36.000 23.09 17.46 39.33 3.27
3699 3856 7.264221 AGAGATGATCTGTTAACATGTCTCAC 58.736 38.462 23.09 15.41 39.33 3.51
3700 3857 6.344500 AGATGATCTGTTAACATGTCTCACC 58.656 40.000 9.13 1.44 0.00 4.02
3701 3858 5.482163 TGATCTGTTAACATGTCTCACCA 57.518 39.130 9.13 0.00 0.00 4.17
3702 3859 6.053632 TGATCTGTTAACATGTCTCACCAT 57.946 37.500 9.13 0.00 0.00 3.55
3703 3860 5.876460 TGATCTGTTAACATGTCTCACCATG 59.124 40.000 9.13 0.00 46.14 3.66
3713 3870 6.573664 CATGTCTCACCATGTTTTTAGGAA 57.426 37.500 0.00 0.00 37.91 3.36
3714 3871 6.381801 CATGTCTCACCATGTTTTTAGGAAC 58.618 40.000 0.00 0.00 37.91 3.62
3715 3872 5.441500 TGTCTCACCATGTTTTTAGGAACA 58.558 37.500 0.00 0.00 43.08 3.18
3716 3873 5.888724 TGTCTCACCATGTTTTTAGGAACAA 59.111 36.000 0.00 0.00 42.29 2.83
3717 3874 6.183360 TGTCTCACCATGTTTTTAGGAACAAC 60.183 38.462 0.00 0.00 42.29 3.32
3718 3875 6.039382 GTCTCACCATGTTTTTAGGAACAACT 59.961 38.462 0.00 0.00 42.29 3.16
3719 3876 7.227910 GTCTCACCATGTTTTTAGGAACAACTA 59.772 37.037 0.00 0.00 42.29 2.24
3720 3877 7.444183 TCTCACCATGTTTTTAGGAACAACTAG 59.556 37.037 0.00 0.00 42.29 2.57
3721 3878 6.016610 TCACCATGTTTTTAGGAACAACTAGC 60.017 38.462 0.00 0.00 42.29 3.42
3722 3879 6.016276 CACCATGTTTTTAGGAACAACTAGCT 60.016 38.462 0.00 0.00 42.29 3.32
3723 3880 7.174253 CACCATGTTTTTAGGAACAACTAGCTA 59.826 37.037 0.00 0.00 42.29 3.32
3724 3881 7.888546 ACCATGTTTTTAGGAACAACTAGCTAT 59.111 33.333 0.00 0.00 42.29 2.97
3725 3882 8.739972 CCATGTTTTTAGGAACAACTAGCTATT 58.260 33.333 0.00 0.00 42.29 1.73
3726 3883 9.559958 CATGTTTTTAGGAACAACTAGCTATTG 57.440 33.333 11.86 11.86 42.29 1.90
3727 3884 8.911918 TGTTTTTAGGAACAACTAGCTATTGA 57.088 30.769 17.40 0.00 36.64 2.57
3728 3885 9.344772 TGTTTTTAGGAACAACTAGCTATTGAA 57.655 29.630 17.40 4.15 36.64 2.69
3729 3886 9.827411 GTTTTTAGGAACAACTAGCTATTGAAG 57.173 33.333 17.40 1.62 0.00 3.02
3730 3887 9.787435 TTTTTAGGAACAACTAGCTATTGAAGA 57.213 29.630 17.40 1.09 0.00 2.87
3731 3888 9.959721 TTTTAGGAACAACTAGCTATTGAAGAT 57.040 29.630 17.40 7.62 0.00 2.40
3735 3892 8.207545 AGGAACAACTAGCTATTGAAGATAAGG 58.792 37.037 17.40 0.00 0.00 2.69
3736 3893 7.041712 GGAACAACTAGCTATTGAAGATAAGGC 60.042 40.741 17.40 0.00 0.00 4.35
3737 3894 7.130681 ACAACTAGCTATTGAAGATAAGGCT 57.869 36.000 17.40 0.00 0.00 4.58
3738 3895 8.251383 ACAACTAGCTATTGAAGATAAGGCTA 57.749 34.615 17.40 0.00 0.00 3.93
3739 3896 8.705594 ACAACTAGCTATTGAAGATAAGGCTAA 58.294 33.333 17.40 0.00 31.81 3.09
3740 3897 9.547753 CAACTAGCTATTGAAGATAAGGCTAAA 57.452 33.333 0.00 0.00 31.81 1.85
3742 3899 9.771534 ACTAGCTATTGAAGATAAGGCTAAAAG 57.228 33.333 0.00 0.00 31.81 2.27
3743 3900 9.988815 CTAGCTATTGAAGATAAGGCTAAAAGA 57.011 33.333 0.00 0.00 31.81 2.52
3819 3976 9.832445 AAGATATCTTATCAACCATTGTACGTT 57.168 29.630 16.50 0.00 33.79 3.99
3820 3977 9.261180 AGATATCTTATCAACCATTGTACGTTG 57.739 33.333 0.00 5.33 40.58 4.10
3821 3978 5.539582 TCTTATCAACCATTGTACGTTGC 57.460 39.130 0.00 0.00 39.36 4.17
3822 3979 4.393680 TCTTATCAACCATTGTACGTTGCC 59.606 41.667 0.00 0.00 39.36 4.52
3823 3980 1.240256 TCAACCATTGTACGTTGCCC 58.760 50.000 0.00 0.00 39.36 5.36
3824 3981 1.202830 TCAACCATTGTACGTTGCCCT 60.203 47.619 0.00 0.00 39.36 5.19
3825 3982 1.611491 CAACCATTGTACGTTGCCCTT 59.389 47.619 0.00 0.00 33.56 3.95
3826 3983 2.814919 CAACCATTGTACGTTGCCCTTA 59.185 45.455 0.00 0.00 33.56 2.69
3827 3984 2.429478 ACCATTGTACGTTGCCCTTAC 58.571 47.619 0.00 0.00 0.00 2.34
3828 3985 1.741145 CCATTGTACGTTGCCCTTACC 59.259 52.381 0.00 0.00 0.00 2.85
3829 3986 2.617021 CCATTGTACGTTGCCCTTACCT 60.617 50.000 0.00 0.00 0.00 3.08
3830 3987 2.460757 TTGTACGTTGCCCTTACCTC 57.539 50.000 0.00 0.00 0.00 3.85
3831 3988 0.609662 TGTACGTTGCCCTTACCTCC 59.390 55.000 0.00 0.00 0.00 4.30
3832 3989 0.900421 GTACGTTGCCCTTACCTCCT 59.100 55.000 0.00 0.00 0.00 3.69
3833 3990 1.134877 GTACGTTGCCCTTACCTCCTC 60.135 57.143 0.00 0.00 0.00 3.71
3834 3991 0.544595 ACGTTGCCCTTACCTCCTCT 60.545 55.000 0.00 0.00 0.00 3.69
3835 3992 0.175989 CGTTGCCCTTACCTCCTCTC 59.824 60.000 0.00 0.00 0.00 3.20
3836 3993 0.175989 GTTGCCCTTACCTCCTCTCG 59.824 60.000 0.00 0.00 0.00 4.04
3837 3994 0.976073 TTGCCCTTACCTCCTCTCGG 60.976 60.000 0.00 0.00 0.00 4.63
3845 4002 2.904866 CTCCTCTCGGCCTCTCGG 60.905 72.222 0.00 0.00 0.00 4.63
3847 4004 2.756283 CCTCTCGGCCTCTCGGTT 60.756 66.667 0.00 0.00 0.00 4.44
3853 4010 1.299165 CGGCCTCTCGGTTATGACG 60.299 63.158 0.00 0.00 0.00 4.35
3862 4021 1.395954 TCGGTTATGACGAGTCAGACG 59.604 52.381 11.74 12.00 43.61 4.18
3868 4027 1.244816 TGACGAGTCAGACGGATTGT 58.755 50.000 1.24 0.00 34.14 2.71
3878 4037 5.105310 AGTCAGACGGATTGTAATGTAAGCT 60.105 40.000 0.00 0.00 0.00 3.74
3895 4054 0.577269 GCTGCGGAATTAGTAGCGTG 59.423 55.000 0.00 0.00 37.56 5.34
3896 4055 1.209128 CTGCGGAATTAGTAGCGTGG 58.791 55.000 0.00 0.00 0.00 4.94
3900 4059 1.296727 GGAATTAGTAGCGTGGTGGC 58.703 55.000 0.00 0.00 0.00 5.01
3902 4061 2.561569 GAATTAGTAGCGTGGTGGCAT 58.438 47.619 0.00 0.00 34.64 4.40
3914 4074 4.555262 CGTGGTGGCATCTTTTAACAAAT 58.445 39.130 0.00 0.00 0.00 2.32
3936 4096 8.779303 CAAATTGTATTAATAGGTGATGCGGTA 58.221 33.333 0.00 0.00 0.00 4.02
4002 4162 4.438200 CGGCCAAATACGAGTAAGCATTTT 60.438 41.667 2.24 0.00 0.00 1.82
4004 4164 6.557110 GGCCAAATACGAGTAAGCATTTTAA 58.443 36.000 0.00 0.00 0.00 1.52
4005 4165 7.030768 GGCCAAATACGAGTAAGCATTTTAAA 58.969 34.615 0.00 0.00 0.00 1.52
4043 4203 9.551734 TCTTATTATTCACATGAAGTCATCCTG 57.448 33.333 0.00 0.00 37.48 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.398292 AGTATCTCTATTCCGGACTGGGA 59.602 47.826 1.83 2.60 38.76 4.37
1 2 3.508012 CAGTATCTCTATTCCGGACTGGG 59.492 52.174 1.83 0.00 38.76 4.45
5 6 6.015350 TCCATTTCAGTATCTCTATTCCGGAC 60.015 42.308 1.83 0.00 0.00 4.79
9 10 9.838339 TTTTCTCCATTTCAGTATCTCTATTCC 57.162 33.333 0.00 0.00 0.00 3.01
22 23 4.394920 GCACCTCGTATTTTCTCCATTTCA 59.605 41.667 0.00 0.00 0.00 2.69
23 24 4.636206 AGCACCTCGTATTTTCTCCATTTC 59.364 41.667 0.00 0.00 0.00 2.17
28 29 2.168728 AGGAGCACCTCGTATTTTCTCC 59.831 50.000 0.00 0.00 44.13 3.71
38 39 0.394488 TAGGAGACAGGAGCACCTCG 60.394 60.000 0.00 0.00 45.94 4.63
39 40 1.853963 TTAGGAGACAGGAGCACCTC 58.146 55.000 0.00 0.00 45.94 3.85
50 51 3.549794 AGCATGGAAGCATTTAGGAGAC 58.450 45.455 0.00 0.00 36.85 3.36
55 56 6.763135 TGTCTTAGTAGCATGGAAGCATTTAG 59.237 38.462 0.00 0.00 36.85 1.85
74 75 4.431378 TGTCTTAGGGGTTCCATGTCTTA 58.569 43.478 0.00 0.00 34.83 2.10
75 76 3.256704 TGTCTTAGGGGTTCCATGTCTT 58.743 45.455 0.00 0.00 34.83 3.01
76 77 2.915869 TGTCTTAGGGGTTCCATGTCT 58.084 47.619 0.00 0.00 34.83 3.41
77 78 3.054361 ACATGTCTTAGGGGTTCCATGTC 60.054 47.826 0.00 0.00 38.74 3.06
78 79 2.919602 ACATGTCTTAGGGGTTCCATGT 59.080 45.455 0.00 0.00 38.37 3.21
79 80 3.282021 CACATGTCTTAGGGGTTCCATG 58.718 50.000 0.00 0.00 36.60 3.66
80 81 2.919602 ACACATGTCTTAGGGGTTCCAT 59.080 45.455 0.00 0.00 34.83 3.41
81 82 2.304761 GACACATGTCTTAGGGGTTCCA 59.695 50.000 4.72 0.00 41.65 3.53
82 83 2.987232 GACACATGTCTTAGGGGTTCC 58.013 52.381 4.72 0.00 41.65 3.62
266 272 2.875933 GCTGCCGTTGTAGCCAAATATA 59.124 45.455 0.00 0.00 43.62 0.86
267 273 1.676006 GCTGCCGTTGTAGCCAAATAT 59.324 47.619 0.00 0.00 43.62 1.28
268 274 1.091537 GCTGCCGTTGTAGCCAAATA 58.908 50.000 0.00 0.00 43.62 1.40
292 298 2.809696 GCAGCCATCAAAGCAACATTTT 59.190 40.909 0.00 0.00 0.00 1.82
315 321 3.958147 AAGCTGGTGACGCGGATGG 62.958 63.158 12.47 0.00 35.50 3.51
320 326 2.356313 ACTCAAGCTGGTGACGCG 60.356 61.111 3.53 3.53 35.50 6.01
321 327 0.671781 ATGACTCAAGCTGGTGACGC 60.672 55.000 0.00 0.00 0.00 5.19
342 348 4.789012 AATTTGTTGTTCATCCATCGCT 57.211 36.364 0.00 0.00 0.00 4.93
344 350 9.190858 TCTTTTAAATTTGTTGTTCATCCATCG 57.809 29.630 0.00 0.00 0.00 3.84
441 450 6.936335 AGTGTTATGAATGTCAGTTCATCACA 59.064 34.615 16.74 14.05 43.44 3.58
450 459 4.998788 TCTCCGAGTGTTATGAATGTCAG 58.001 43.478 0.00 0.00 0.00 3.51
461 470 3.315191 CACCATTTGTTTCTCCGAGTGTT 59.685 43.478 0.00 0.00 0.00 3.32
527 536 3.378742 ACATTCGTGGTGCTGTGTAAAAA 59.621 39.130 0.00 0.00 0.00 1.94
555 567 8.849168 CCTGCATTCATATACATTTAGGTGAAA 58.151 33.333 0.00 0.00 0.00 2.69
562 574 8.210265 TGAGTGTCCTGCATTCATATACATTTA 58.790 33.333 0.00 0.00 38.64 1.40
566 578 5.612725 TGAGTGTCCTGCATTCATATACA 57.387 39.130 0.00 0.00 38.64 2.29
567 579 7.443575 AGAATTGAGTGTCCTGCATTCATATAC 59.556 37.037 0.00 0.00 42.23 1.47
572 584 3.754850 CAGAATTGAGTGTCCTGCATTCA 59.245 43.478 0.00 0.00 41.22 2.57
580 592 2.622942 TGCCAAACAGAATTGAGTGTCC 59.377 45.455 0.00 0.00 31.84 4.02
581 593 3.988379 TGCCAAACAGAATTGAGTGTC 57.012 42.857 0.00 0.00 31.84 3.67
583 595 5.754406 TCATTTTGCCAAACAGAATTGAGTG 59.246 36.000 0.00 0.00 30.97 3.51
584 596 5.754890 GTCATTTTGCCAAACAGAATTGAGT 59.245 36.000 0.00 0.00 30.97 3.41
585 597 5.987347 AGTCATTTTGCCAAACAGAATTGAG 59.013 36.000 0.00 0.00 30.97 3.02
586 598 5.916318 AGTCATTTTGCCAAACAGAATTGA 58.084 33.333 0.00 0.00 30.97 2.57
587 599 6.607735 AAGTCATTTTGCCAAACAGAATTG 57.392 33.333 3.79 0.00 30.97 2.32
588 600 7.336427 TGAAAAGTCATTTTGCCAAACAGAATT 59.664 29.630 0.00 0.00 38.74 2.17
589 601 6.822676 TGAAAAGTCATTTTGCCAAACAGAAT 59.177 30.769 0.00 0.00 38.74 2.40
590 602 6.169094 TGAAAAGTCATTTTGCCAAACAGAA 58.831 32.000 0.00 0.00 38.74 3.02
591 603 5.728471 TGAAAAGTCATTTTGCCAAACAGA 58.272 33.333 0.00 0.00 38.74 3.41
592 604 5.581874 ACTGAAAAGTCATTTTGCCAAACAG 59.418 36.000 0.00 0.00 38.74 3.16
593 605 5.486526 ACTGAAAAGTCATTTTGCCAAACA 58.513 33.333 0.00 0.00 38.74 2.83
594 606 7.713764 ATACTGAAAAGTCATTTTGCCAAAC 57.286 32.000 0.00 0.00 38.74 2.93
595 607 8.729805 AAATACTGAAAAGTCATTTTGCCAAA 57.270 26.923 0.00 0.00 38.74 3.28
596 608 8.729805 AAAATACTGAAAAGTCATTTTGCCAA 57.270 26.923 0.00 0.00 38.74 4.52
597 609 8.729805 AAAAATACTGAAAAGTCATTTTGCCA 57.270 26.923 0.00 0.00 38.74 4.92
642 654 9.634021 ACATTAAATTTTCCCCTAAAAAGCAAA 57.366 25.926 0.00 0.00 40.37 3.68
643 655 9.634021 AACATTAAATTTTCCCCTAAAAAGCAA 57.366 25.926 0.00 0.00 40.37 3.91
644 656 9.634021 AAACATTAAATTTTCCCCTAAAAAGCA 57.366 25.926 0.00 0.00 40.37 3.91
651 663 8.745590 GCTCAGTAAACATTAAATTTTCCCCTA 58.254 33.333 0.00 0.00 0.00 3.53
652 664 7.454694 AGCTCAGTAAACATTAAATTTTCCCCT 59.545 33.333 0.00 0.00 0.00 4.79
653 665 7.611770 AGCTCAGTAAACATTAAATTTTCCCC 58.388 34.615 0.00 0.00 0.00 4.81
654 666 8.925700 CAAGCTCAGTAAACATTAAATTTTCCC 58.074 33.333 0.00 0.00 0.00 3.97
655 667 8.925700 CCAAGCTCAGTAAACATTAAATTTTCC 58.074 33.333 0.00 0.00 0.00 3.13
656 668 8.925700 CCCAAGCTCAGTAAACATTAAATTTTC 58.074 33.333 0.00 0.00 0.00 2.29
665 677 2.716217 GCTCCCAAGCTCAGTAAACAT 58.284 47.619 0.00 0.00 45.55 2.71
784 859 1.733526 GCTGAGGGTGCACGTTTTT 59.266 52.632 11.45 0.00 0.00 1.94
785 860 2.193536 GGCTGAGGGTGCACGTTTT 61.194 57.895 11.45 0.00 0.00 2.43
786 861 2.594592 GGCTGAGGGTGCACGTTT 60.595 61.111 11.45 0.00 0.00 3.60
787 862 4.988598 CGGCTGAGGGTGCACGTT 62.989 66.667 11.45 0.30 0.00 3.99
789 864 4.680237 TTCGGCTGAGGGTGCACG 62.680 66.667 11.45 0.00 0.00 5.34
790 865 2.167398 TACTTCGGCTGAGGGTGCAC 62.167 60.000 8.80 8.80 0.00 4.57
791 866 1.476845 TTACTTCGGCTGAGGGTGCA 61.477 55.000 9.75 0.00 0.00 4.57
792 867 0.321298 TTTACTTCGGCTGAGGGTGC 60.321 55.000 9.75 0.00 0.00 5.01
793 868 1.275291 TCTTTACTTCGGCTGAGGGTG 59.725 52.381 9.75 0.00 0.00 4.61
794 869 1.640917 TCTTTACTTCGGCTGAGGGT 58.359 50.000 9.75 8.77 0.00 4.34
795 870 2.762535 TTCTTTACTTCGGCTGAGGG 57.237 50.000 9.75 2.98 0.00 4.30
796 871 4.672801 GCAAATTCTTTACTTCGGCTGAGG 60.673 45.833 2.55 2.55 0.00 3.86
797 872 4.154918 AGCAAATTCTTTACTTCGGCTGAG 59.845 41.667 0.00 0.00 0.00 3.35
798 873 4.072131 AGCAAATTCTTTACTTCGGCTGA 58.928 39.130 0.00 0.00 0.00 4.26
799 874 4.083324 TGAGCAAATTCTTTACTTCGGCTG 60.083 41.667 0.00 0.00 0.00 4.85
800 875 4.072131 TGAGCAAATTCTTTACTTCGGCT 58.928 39.130 0.00 0.00 0.00 5.52
801 876 4.419522 TGAGCAAATTCTTTACTTCGGC 57.580 40.909 0.00 0.00 0.00 5.54
802 877 7.692908 TTTTTGAGCAAATTCTTTACTTCGG 57.307 32.000 0.00 0.00 0.00 4.30
827 902 7.576861 TCTGGAATTCTTTACTTCGGTTTTT 57.423 32.000 5.23 0.00 0.00 1.94
828 903 7.761038 ATCTGGAATTCTTTACTTCGGTTTT 57.239 32.000 5.23 0.00 0.00 2.43
829 904 8.893727 CATATCTGGAATTCTTTACTTCGGTTT 58.106 33.333 5.23 0.00 0.00 3.27
830 905 7.012421 GCATATCTGGAATTCTTTACTTCGGTT 59.988 37.037 5.23 0.00 0.00 4.44
831 906 6.483640 GCATATCTGGAATTCTTTACTTCGGT 59.516 38.462 5.23 0.00 0.00 4.69
832 907 6.073003 GGCATATCTGGAATTCTTTACTTCGG 60.073 42.308 5.23 0.00 0.00 4.30
833 908 6.073003 GGGCATATCTGGAATTCTTTACTTCG 60.073 42.308 5.23 0.00 0.00 3.79
842 917 3.265479 AGCTAGGGGCATATCTGGAATTC 59.735 47.826 0.00 0.00 44.79 2.17
852 927 1.557188 GGGGGATAAGCTAGGGGCATA 60.557 57.143 0.00 0.00 44.79 3.14
853 928 0.846870 GGGGGATAAGCTAGGGGCAT 60.847 60.000 0.00 0.00 44.79 4.40
885 960 2.284921 TGGGAGGCTCAGTCCTGG 60.285 66.667 17.69 0.00 36.38 4.45
891 966 4.087892 CGTGGGTGGGAGGCTCAG 62.088 72.222 17.69 0.00 0.00 3.35
892 967 4.954118 ACGTGGGTGGGAGGCTCA 62.954 66.667 17.69 0.00 0.00 4.26
893 968 4.083862 GACGTGGGTGGGAGGCTC 62.084 72.222 5.78 5.78 0.00 4.70
894 969 4.954118 TGACGTGGGTGGGAGGCT 62.954 66.667 0.00 0.00 0.00 4.58
937 1012 3.023735 CTTTGGGGAGGGGGAGGG 61.024 72.222 0.00 0.00 0.00 4.30
938 1013 3.744155 GCTTTGGGGAGGGGGAGG 61.744 72.222 0.00 0.00 0.00 4.30
939 1014 3.744155 GGCTTTGGGGAGGGGGAG 61.744 72.222 0.00 0.00 0.00 4.30
1226 1313 3.149981 TCTATCTGTATGGAGCACGAGG 58.850 50.000 0.00 0.00 0.00 4.63
1249 1336 1.522355 CCATCGCGCAGTGGAATCT 60.522 57.895 20.21 0.00 37.72 2.40
1250 1337 0.882042 ATCCATCGCGCAGTGGAATC 60.882 55.000 27.95 0.00 46.78 2.52
1251 1338 0.464373 AATCCATCGCGCAGTGGAAT 60.464 50.000 27.95 20.12 46.78 3.01
1252 1339 1.078497 AATCCATCGCGCAGTGGAA 60.078 52.632 27.95 15.45 46.78 3.53
1255 1342 1.985447 AAGCAATCCATCGCGCAGTG 61.985 55.000 8.75 4.96 40.84 3.66
1260 1347 2.480224 AATGAAAGCAATCCATCGCG 57.520 45.000 0.00 0.00 0.00 5.87
1272 1359 9.579768 AGATTATCGATCCGAGATAAATGAAAG 57.420 33.333 0.00 0.00 41.92 2.62
1285 1372 3.554259 TTCGTCCAGATTATCGATCCG 57.446 47.619 0.00 0.00 35.21 4.18
1316 1403 2.344441 CACACAAATCTAGTACCGCGTG 59.656 50.000 4.92 0.00 0.00 5.34
1325 1412 2.024176 CCCCCGACACACAAATCTAG 57.976 55.000 0.00 0.00 0.00 2.43
1393 1480 0.179200 CAACCGTAAATCTGCGTGCC 60.179 55.000 0.00 0.00 0.00 5.01
1412 1499 1.207329 ACACTAGCTCCGGTTCCAATC 59.793 52.381 0.00 0.00 0.00 2.67
1470 1557 8.839343 TCATATCGCACAATGAAAAACATATCT 58.161 29.630 0.00 0.00 38.38 1.98
1580 1667 2.994995 ATCGGACCGAGCACCACA 60.995 61.111 22.99 0.00 39.91 4.17
1594 1681 6.016360 ACCAGAGAAATCTAGTGATCTCATCG 60.016 42.308 17.46 10.07 30.40 3.84
1623 1744 3.481453 TCACCGAATCAACATGGTTCAA 58.519 40.909 0.00 0.00 37.33 2.69
1633 1754 4.020218 AGACAGAAGGAATCACCGAATCAA 60.020 41.667 0.00 0.00 44.74 2.57
1735 1856 5.763204 AGAAGTCGGTAGAAAAGCAAATTCA 59.237 36.000 0.00 0.00 0.00 2.57
1774 1895 0.687920 TTTACGCCTCACACCCATGA 59.312 50.000 0.00 0.00 0.00 3.07
1792 1913 8.184192 CGATGCATTCTTATTAGTCACCTTTTT 58.816 33.333 0.00 0.00 0.00 1.94
1890 2011 8.087982 ACGTCCATATAAAGTAGCATCAAATG 57.912 34.615 0.00 0.00 0.00 2.32
1908 2031 8.129840 GCTATAAGATTCGACATATACGTCCAT 58.870 37.037 0.00 0.00 31.91 3.41
1989 2112 7.447374 TTCAGTTATAGTGACAAACAATGGG 57.553 36.000 0.00 0.00 0.00 4.00
2023 2146 5.357878 TGGGTAAAACATCTGATCATGCTTC 59.642 40.000 0.00 0.00 0.00 3.86
2054 2177 7.652909 TCAAAGTAAATTTTCCAATCACAGCAG 59.347 33.333 0.00 0.00 0.00 4.24
2138 2261 5.591877 AGCTGGCCAAGTTCTTAATGATAAG 59.408 40.000 7.01 0.00 39.97 1.73
2205 2336 5.010820 GCGGTTGGACTATAGGACTAATTCT 59.989 44.000 4.43 0.00 0.00 2.40
2342 2481 6.645827 TGAATGCAAATTGACCAACTGTAATG 59.354 34.615 0.00 0.00 0.00 1.90
2343 2482 6.646240 GTGAATGCAAATTGACCAACTGTAAT 59.354 34.615 0.00 0.00 0.00 1.89
2456 2595 4.525912 ATCCTTTGTTGCAATTCCAGTC 57.474 40.909 0.59 0.00 0.00 3.51
2558 2697 5.124457 ACATGAGCAATACATGAAACTGGAC 59.876 40.000 13.54 0.00 45.22 4.02
2612 2751 2.574450 AGCTCTAGTTCTACGCCCTAC 58.426 52.381 0.00 0.00 0.00 3.18
2613 2752 3.294038 AAGCTCTAGTTCTACGCCCTA 57.706 47.619 0.00 0.00 0.00 3.53
2663 2805 6.806668 TTGAGGTATACCATGTTCTGATGA 57.193 37.500 23.87 0.00 38.89 2.92
2707 2849 7.128331 CGATATTGCCTGAAACTTATGTCAAG 58.872 38.462 0.00 0.00 0.00 3.02
2786 2928 4.937620 TGTTAGCCATTTTCTAGCAGACAG 59.062 41.667 0.00 0.00 0.00 3.51
2787 2929 4.695455 GTGTTAGCCATTTTCTAGCAGACA 59.305 41.667 0.00 0.00 29.90 3.41
2791 2933 5.070001 ACAAGTGTTAGCCATTTTCTAGCA 58.930 37.500 0.00 0.00 0.00 3.49
2804 2946 2.096218 GCGCTTTCAGGACAAGTGTTAG 60.096 50.000 0.00 0.00 34.74 2.34
2885 3042 1.028868 GCTTCCCTGCATGGACAGAC 61.029 60.000 10.61 5.06 40.25 3.51
2989 3146 0.809636 GGTGCCACAACTGCAAAACC 60.810 55.000 0.00 0.00 41.06 3.27
3356 3513 6.890293 ACATGAAGAAATAACTCTACCTCCC 58.110 40.000 0.00 0.00 0.00 4.30
3357 3514 8.669243 CAAACATGAAGAAATAACTCTACCTCC 58.331 37.037 0.00 0.00 0.00 4.30
3358 3515 8.669243 CCAAACATGAAGAAATAACTCTACCTC 58.331 37.037 0.00 0.00 0.00 3.85
3361 3518 9.827411 GAACCAAACATGAAGAAATAACTCTAC 57.173 33.333 0.00 0.00 0.00 2.59
3365 3522 7.504924 TCGAACCAAACATGAAGAAATAACT 57.495 32.000 0.00 0.00 0.00 2.24
3393 3550 2.626266 TGAGTTCTCCACTAGCGTGAAA 59.374 45.455 0.00 0.00 43.97 2.69
3416 3573 2.006888 ACATTGCGTACAGTACATGCC 58.993 47.619 11.37 0.00 0.00 4.40
3430 3587 6.860023 GCTAAAGTGGATCATGATTACATTGC 59.140 38.462 19.81 16.48 34.15 3.56
3439 3596 4.574674 ACAAGGCTAAAGTGGATCATGA 57.425 40.909 0.00 0.00 0.00 3.07
3440 3597 4.460382 ACAACAAGGCTAAAGTGGATCATG 59.540 41.667 0.00 0.00 0.00 3.07
3449 3606 7.093945 ACCAACCATAATACAACAAGGCTAAAG 60.094 37.037 0.00 0.00 0.00 1.85
3457 3614 6.307776 TCTCCAACCAACCATAATACAACAA 58.692 36.000 0.00 0.00 0.00 2.83
3468 3625 0.764890 CTCCACTCTCCAACCAACCA 59.235 55.000 0.00 0.00 0.00 3.67
3469 3626 0.036875 CCTCCACTCTCCAACCAACC 59.963 60.000 0.00 0.00 0.00 3.77
3471 3628 1.059584 TGCCTCCACTCTCCAACCAA 61.060 55.000 0.00 0.00 0.00 3.67
3473 3630 0.393537 CATGCCTCCACTCTCCAACC 60.394 60.000 0.00 0.00 0.00 3.77
3475 3632 1.300963 GCATGCCTCCACTCTCCAA 59.699 57.895 6.36 0.00 0.00 3.53
3476 3633 2.673200 GGCATGCCTCCACTCTCCA 61.673 63.158 29.98 0.00 0.00 3.86
3477 3634 2.191641 GGCATGCCTCCACTCTCC 59.808 66.667 29.98 0.00 0.00 3.71
3478 3635 2.202987 CGGCATGCCTCCACTCTC 60.203 66.667 33.07 4.92 0.00 3.20
3479 3636 2.249413 CTTCGGCATGCCTCCACTCT 62.249 60.000 33.07 0.00 0.00 3.24
3480 3637 1.817099 CTTCGGCATGCCTCCACTC 60.817 63.158 33.07 6.47 0.00 3.51
3481 3638 1.264749 TACTTCGGCATGCCTCCACT 61.265 55.000 33.07 14.48 0.00 4.00
3482 3639 0.179045 ATACTTCGGCATGCCTCCAC 60.179 55.000 33.07 8.02 0.00 4.02
3483 3640 1.070134 GTATACTTCGGCATGCCTCCA 59.930 52.381 33.07 15.08 0.00 3.86
3484 3641 1.608283 GGTATACTTCGGCATGCCTCC 60.608 57.143 33.07 17.21 0.00 4.30
3485 3642 1.070134 TGGTATACTTCGGCATGCCTC 59.930 52.381 33.07 9.61 0.00 4.70
3486 3643 1.128200 TGGTATACTTCGGCATGCCT 58.872 50.000 33.07 17.87 0.00 4.75
3487 3644 1.806542 CATGGTATACTTCGGCATGCC 59.193 52.381 27.67 27.67 0.00 4.40
3488 3645 2.480419 GACATGGTATACTTCGGCATGC 59.520 50.000 9.90 9.90 0.00 4.06
3489 3646 3.995199 AGACATGGTATACTTCGGCATG 58.005 45.455 14.06 14.06 0.00 4.06
3490 3647 4.380531 CAAGACATGGTATACTTCGGCAT 58.619 43.478 2.25 0.00 0.00 4.40
3491 3648 3.431626 CCAAGACATGGTATACTTCGGCA 60.432 47.826 2.25 0.00 44.85 5.69
3492 3649 3.131396 CCAAGACATGGTATACTTCGGC 58.869 50.000 2.25 0.00 44.85 5.54
3504 3661 6.652481 AGATAGAAAGAACACACCAAGACATG 59.348 38.462 0.00 0.00 0.00 3.21
3505 3662 6.773638 AGATAGAAAGAACACACCAAGACAT 58.226 36.000 0.00 0.00 0.00 3.06
3506 3663 6.174720 AGATAGAAAGAACACACCAAGACA 57.825 37.500 0.00 0.00 0.00 3.41
3507 3664 7.148557 GCTAAGATAGAAAGAACACACCAAGAC 60.149 40.741 0.00 0.00 0.00 3.01
3508 3665 6.874134 GCTAAGATAGAAAGAACACACCAAGA 59.126 38.462 0.00 0.00 0.00 3.02
3509 3666 6.876257 AGCTAAGATAGAAAGAACACACCAAG 59.124 38.462 0.00 0.00 0.00 3.61
3514 3671 7.224297 ACCAAAGCTAAGATAGAAAGAACACA 58.776 34.615 0.00 0.00 0.00 3.72
3531 3688 3.515602 AAGATGGACAAGACCAAAGCT 57.484 42.857 0.00 0.00 43.47 3.74
3532 3689 4.202151 ACAAAAGATGGACAAGACCAAAGC 60.202 41.667 0.00 0.00 43.47 3.51
3561 3718 6.535150 CCATTGTACATATGCCCTAAGTATCG 59.465 42.308 1.58 0.00 0.00 2.92
3567 3724 6.260700 AGAACCATTGTACATATGCCCTAA 57.739 37.500 1.58 0.00 0.00 2.69
3569 3726 4.796110 AGAACCATTGTACATATGCCCT 57.204 40.909 1.58 0.00 0.00 5.19
3570 3727 6.476378 AGATAGAACCATTGTACATATGCCC 58.524 40.000 1.58 0.00 0.00 5.36
3571 3728 7.986085 AAGATAGAACCATTGTACATATGCC 57.014 36.000 1.58 0.00 0.00 4.40
3572 3729 9.155975 CCTAAGATAGAACCATTGTACATATGC 57.844 37.037 1.58 0.00 0.00 3.14
3575 3732 9.656323 ACTCCTAAGATAGAACCATTGTACATA 57.344 33.333 0.00 0.00 0.00 2.29
3576 3733 8.424918 CACTCCTAAGATAGAACCATTGTACAT 58.575 37.037 0.00 0.00 0.00 2.29
3577 3734 7.399191 ACACTCCTAAGATAGAACCATTGTACA 59.601 37.037 0.00 0.00 0.00 2.90
3578 3735 7.783042 ACACTCCTAAGATAGAACCATTGTAC 58.217 38.462 0.00 0.00 0.00 2.90
3579 3736 7.618117 TGACACTCCTAAGATAGAACCATTGTA 59.382 37.037 0.00 0.00 0.00 2.41
3580 3737 6.440647 TGACACTCCTAAGATAGAACCATTGT 59.559 38.462 0.00 0.00 0.00 2.71
3581 3738 6.878317 TGACACTCCTAAGATAGAACCATTG 58.122 40.000 0.00 0.00 0.00 2.82
3582 3739 7.126421 ACATGACACTCCTAAGATAGAACCATT 59.874 37.037 0.00 0.00 0.00 3.16
3583 3740 6.613271 ACATGACACTCCTAAGATAGAACCAT 59.387 38.462 0.00 0.00 0.00 3.55
3584 3741 5.958380 ACATGACACTCCTAAGATAGAACCA 59.042 40.000 0.00 0.00 0.00 3.67
3585 3742 6.472686 ACATGACACTCCTAAGATAGAACC 57.527 41.667 0.00 0.00 0.00 3.62
3586 3743 7.502895 TCCTACATGACACTCCTAAGATAGAAC 59.497 40.741 0.00 0.00 0.00 3.01
3587 3744 7.583625 TCCTACATGACACTCCTAAGATAGAA 58.416 38.462 0.00 0.00 0.00 2.10
3588 3745 7.150447 TCCTACATGACACTCCTAAGATAGA 57.850 40.000 0.00 0.00 0.00 1.98
3589 3746 9.521841 TTATCCTACATGACACTCCTAAGATAG 57.478 37.037 0.00 0.00 0.00 2.08
3590 3747 9.877222 TTTATCCTACATGACACTCCTAAGATA 57.123 33.333 0.00 0.00 0.00 1.98
3591 3748 8.783660 TTTATCCTACATGACACTCCTAAGAT 57.216 34.615 0.00 0.00 0.00 2.40
3592 3749 8.642432 CATTTATCCTACATGACACTCCTAAGA 58.358 37.037 0.00 0.00 0.00 2.10
3593 3750 7.386299 GCATTTATCCTACATGACACTCCTAAG 59.614 40.741 0.00 0.00 0.00 2.18
3594 3751 7.071196 AGCATTTATCCTACATGACACTCCTAA 59.929 37.037 0.00 0.00 0.00 2.69
3595 3752 6.554982 AGCATTTATCCTACATGACACTCCTA 59.445 38.462 0.00 0.00 0.00 2.94
3596 3753 5.367937 AGCATTTATCCTACATGACACTCCT 59.632 40.000 0.00 0.00 0.00 3.69
3597 3754 5.468072 CAGCATTTATCCTACATGACACTCC 59.532 44.000 0.00 0.00 0.00 3.85
3598 3755 5.468072 CCAGCATTTATCCTACATGACACTC 59.532 44.000 0.00 0.00 0.00 3.51
3599 3756 5.371526 CCAGCATTTATCCTACATGACACT 58.628 41.667 0.00 0.00 0.00 3.55
3600 3757 4.516698 CCCAGCATTTATCCTACATGACAC 59.483 45.833 0.00 0.00 0.00 3.67
3601 3758 4.446167 CCCCAGCATTTATCCTACATGACA 60.446 45.833 0.00 0.00 0.00 3.58
3602 3759 4.074970 CCCCAGCATTTATCCTACATGAC 58.925 47.826 0.00 0.00 0.00 3.06
3603 3760 3.721575 ACCCCAGCATTTATCCTACATGA 59.278 43.478 0.00 0.00 0.00 3.07
3604 3761 3.822735 CACCCCAGCATTTATCCTACATG 59.177 47.826 0.00 0.00 0.00 3.21
3605 3762 3.721575 TCACCCCAGCATTTATCCTACAT 59.278 43.478 0.00 0.00 0.00 2.29
3606 3763 3.119319 TCACCCCAGCATTTATCCTACA 58.881 45.455 0.00 0.00 0.00 2.74
3607 3764 3.857157 TCACCCCAGCATTTATCCTAC 57.143 47.619 0.00 0.00 0.00 3.18
3608 3765 3.138283 CCTTCACCCCAGCATTTATCCTA 59.862 47.826 0.00 0.00 0.00 2.94
3609 3766 2.091665 CCTTCACCCCAGCATTTATCCT 60.092 50.000 0.00 0.00 0.00 3.24
3610 3767 2.310538 CCTTCACCCCAGCATTTATCC 58.689 52.381 0.00 0.00 0.00 2.59
3611 3768 2.310538 CCCTTCACCCCAGCATTTATC 58.689 52.381 0.00 0.00 0.00 1.75
3612 3769 1.062962 CCCCTTCACCCCAGCATTTAT 60.063 52.381 0.00 0.00 0.00 1.40
3613 3770 0.334676 CCCCTTCACCCCAGCATTTA 59.665 55.000 0.00 0.00 0.00 1.40
3614 3771 1.079073 CCCCTTCACCCCAGCATTT 59.921 57.895 0.00 0.00 0.00 2.32
3615 3772 1.856873 TCCCCTTCACCCCAGCATT 60.857 57.895 0.00 0.00 0.00 3.56
3616 3773 2.204291 TCCCCTTCACCCCAGCAT 60.204 61.111 0.00 0.00 0.00 3.79
3617 3774 2.935481 CTCCCCTTCACCCCAGCA 60.935 66.667 0.00 0.00 0.00 4.41
3618 3775 2.610859 TCTCCCCTTCACCCCAGC 60.611 66.667 0.00 0.00 0.00 4.85
3619 3776 0.980231 CTCTCTCCCCTTCACCCCAG 60.980 65.000 0.00 0.00 0.00 4.45
3620 3777 1.081092 CTCTCTCCCCTTCACCCCA 59.919 63.158 0.00 0.00 0.00 4.96
3621 3778 0.252742 TTCTCTCTCCCCTTCACCCC 60.253 60.000 0.00 0.00 0.00 4.95
3622 3779 1.657804 TTTCTCTCTCCCCTTCACCC 58.342 55.000 0.00 0.00 0.00 4.61
3623 3780 2.840651 TGATTTCTCTCTCCCCTTCACC 59.159 50.000 0.00 0.00 0.00 4.02
3624 3781 4.769345 ATGATTTCTCTCTCCCCTTCAC 57.231 45.455 0.00 0.00 0.00 3.18
3625 3782 5.966935 ACTTATGATTTCTCTCTCCCCTTCA 59.033 40.000 0.00 0.00 0.00 3.02
3626 3783 6.493189 ACTTATGATTTCTCTCTCCCCTTC 57.507 41.667 0.00 0.00 0.00 3.46
3627 3784 7.996758 TTACTTATGATTTCTCTCTCCCCTT 57.003 36.000 0.00 0.00 0.00 3.95
3628 3785 7.996758 TTTACTTATGATTTCTCTCTCCCCT 57.003 36.000 0.00 0.00 0.00 4.79
3629 3786 7.174080 GCATTTACTTATGATTTCTCTCTCCCC 59.826 40.741 0.00 0.00 0.00 4.81
3630 3787 7.936301 AGCATTTACTTATGATTTCTCTCTCCC 59.064 37.037 0.00 0.00 0.00 4.30
3631 3788 8.900983 AGCATTTACTTATGATTTCTCTCTCC 57.099 34.615 0.00 0.00 0.00 3.71
3633 3790 9.678260 ACAAGCATTTACTTATGATTTCTCTCT 57.322 29.630 0.00 0.00 32.21 3.10
3634 3791 9.928236 GACAAGCATTTACTTATGATTTCTCTC 57.072 33.333 0.00 0.00 32.21 3.20
3635 3792 9.678260 AGACAAGCATTTACTTATGATTTCTCT 57.322 29.630 0.00 0.00 32.21 3.10
3671 3828 9.809096 GAGACATGTTAACAGATCATCTCTTAA 57.191 33.333 14.65 0.00 29.16 1.85
3672 3829 8.971073 TGAGACATGTTAACAGATCATCTCTTA 58.029 33.333 23.52 11.97 29.16 2.10
3673 3830 7.763528 GTGAGACATGTTAACAGATCATCTCTT 59.236 37.037 23.52 8.03 29.16 2.85
3674 3831 7.264221 GTGAGACATGTTAACAGATCATCTCT 58.736 38.462 23.52 13.15 33.14 3.10
3675 3832 6.478344 GGTGAGACATGTTAACAGATCATCTC 59.522 42.308 14.65 18.08 0.00 2.75
3676 3833 6.070596 TGGTGAGACATGTTAACAGATCATCT 60.071 38.462 14.65 11.10 0.00 2.90
3677 3834 6.108687 TGGTGAGACATGTTAACAGATCATC 58.891 40.000 14.65 14.26 0.00 2.92
3678 3835 6.053632 TGGTGAGACATGTTAACAGATCAT 57.946 37.500 14.65 4.49 0.00 2.45
3679 3836 5.482163 TGGTGAGACATGTTAACAGATCA 57.518 39.130 14.65 11.58 0.00 2.92
3680 3837 6.355397 CATGGTGAGACATGTTAACAGATC 57.645 41.667 14.65 13.14 42.48 2.75
3691 3848 6.068010 TGTTCCTAAAAACATGGTGAGACAT 58.932 36.000 0.00 0.00 34.31 3.06
3692 3849 5.441500 TGTTCCTAAAAACATGGTGAGACA 58.558 37.500 0.00 0.00 34.31 3.41
3693 3850 6.039382 AGTTGTTCCTAAAAACATGGTGAGAC 59.961 38.462 0.00 0.00 38.83 3.36
3694 3851 6.126409 AGTTGTTCCTAAAAACATGGTGAGA 58.874 36.000 0.00 0.00 38.83 3.27
3695 3852 6.391227 AGTTGTTCCTAAAAACATGGTGAG 57.609 37.500 0.00 0.00 38.83 3.51
3696 3853 6.016610 GCTAGTTGTTCCTAAAAACATGGTGA 60.017 38.462 0.00 0.00 38.83 4.02
3697 3854 6.016276 AGCTAGTTGTTCCTAAAAACATGGTG 60.016 38.462 0.00 0.00 38.83 4.17
3698 3855 6.068670 AGCTAGTTGTTCCTAAAAACATGGT 58.931 36.000 0.00 0.00 38.83 3.55
3699 3856 6.575162 AGCTAGTTGTTCCTAAAAACATGG 57.425 37.500 0.00 0.00 38.83 3.66
3700 3857 9.559958 CAATAGCTAGTTGTTCCTAAAAACATG 57.440 33.333 0.00 0.00 38.83 3.21
3701 3858 9.515226 TCAATAGCTAGTTGTTCCTAAAAACAT 57.485 29.630 0.00 0.00 38.83 2.71
3702 3859 8.911918 TCAATAGCTAGTTGTTCCTAAAAACA 57.088 30.769 0.00 0.00 37.37 2.83
3703 3860 9.827411 CTTCAATAGCTAGTTGTTCCTAAAAAC 57.173 33.333 0.00 0.00 0.00 2.43
3704 3861 9.787435 TCTTCAATAGCTAGTTGTTCCTAAAAA 57.213 29.630 0.00 0.00 0.00 1.94
3705 3862 9.959721 ATCTTCAATAGCTAGTTGTTCCTAAAA 57.040 29.630 0.00 0.00 0.00 1.52
3709 3866 8.207545 CCTTATCTTCAATAGCTAGTTGTTCCT 58.792 37.037 0.00 0.00 0.00 3.36
3710 3867 7.041712 GCCTTATCTTCAATAGCTAGTTGTTCC 60.042 40.741 0.00 0.00 0.00 3.62
3711 3868 7.713073 AGCCTTATCTTCAATAGCTAGTTGTTC 59.287 37.037 0.00 0.00 0.00 3.18
3712 3869 7.569240 AGCCTTATCTTCAATAGCTAGTTGTT 58.431 34.615 0.00 0.00 0.00 2.83
3713 3870 7.130681 AGCCTTATCTTCAATAGCTAGTTGT 57.869 36.000 0.00 0.00 0.00 3.32
3714 3871 9.547753 TTTAGCCTTATCTTCAATAGCTAGTTG 57.452 33.333 0.00 4.76 33.31 3.16
3716 3873 9.771534 CTTTTAGCCTTATCTTCAATAGCTAGT 57.228 33.333 0.00 0.00 33.31 2.57
3717 3874 9.988815 TCTTTTAGCCTTATCTTCAATAGCTAG 57.011 33.333 0.00 0.00 33.31 3.42
3793 3950 9.832445 AACGTACAATGGTTGATAAGATATCTT 57.168 29.630 21.28 21.28 39.85 2.40
3794 3951 9.261180 CAACGTACAATGGTTGATAAGATATCT 57.739 33.333 0.00 0.00 44.80 1.98
3795 3952 8.009974 GCAACGTACAATGGTTGATAAGATATC 58.990 37.037 13.49 0.00 44.80 1.63
3796 3953 7.041372 GGCAACGTACAATGGTTGATAAGATAT 60.041 37.037 13.49 0.00 44.80 1.63
3797 3954 6.259167 GGCAACGTACAATGGTTGATAAGATA 59.741 38.462 13.49 0.00 44.80 1.98
3798 3955 5.065988 GGCAACGTACAATGGTTGATAAGAT 59.934 40.000 13.49 0.00 44.80 2.40
3799 3956 4.393680 GGCAACGTACAATGGTTGATAAGA 59.606 41.667 13.49 0.00 44.80 2.10
3800 3957 4.438200 GGGCAACGTACAATGGTTGATAAG 60.438 45.833 13.49 0.00 44.80 1.73
3801 3958 3.440872 GGGCAACGTACAATGGTTGATAA 59.559 43.478 13.49 0.00 44.80 1.75
3802 3959 3.011119 GGGCAACGTACAATGGTTGATA 58.989 45.455 13.49 0.00 44.80 2.15
3803 3960 1.816224 GGGCAACGTACAATGGTTGAT 59.184 47.619 13.49 0.00 44.80 2.57
3804 3961 1.202830 AGGGCAACGTACAATGGTTGA 60.203 47.619 13.49 0.00 44.80 3.18
3805 3962 1.243902 AGGGCAACGTACAATGGTTG 58.756 50.000 6.91 6.91 44.80 3.77
3806 3963 1.989706 AAGGGCAACGTACAATGGTT 58.010 45.000 0.00 0.00 37.60 3.67
3807 3964 2.429478 GTAAGGGCAACGTACAATGGT 58.571 47.619 0.00 0.00 37.60 3.55
3808 3965 1.741145 GGTAAGGGCAACGTACAATGG 59.259 52.381 0.00 0.00 37.60 3.16
3809 3966 2.676342 GAGGTAAGGGCAACGTACAATG 59.324 50.000 0.00 0.00 37.60 2.82
3810 3967 2.355412 GGAGGTAAGGGCAACGTACAAT 60.355 50.000 0.00 0.00 37.60 2.71
3811 3968 1.002315 GGAGGTAAGGGCAACGTACAA 59.998 52.381 0.00 0.00 37.60 2.41
3812 3969 0.609662 GGAGGTAAGGGCAACGTACA 59.390 55.000 0.00 0.00 37.60 2.90
3813 3970 0.900421 AGGAGGTAAGGGCAACGTAC 59.100 55.000 0.00 0.00 37.60 3.67
3814 3971 1.188863 GAGGAGGTAAGGGCAACGTA 58.811 55.000 0.00 0.00 37.60 3.57
3815 3972 0.544595 AGAGGAGGTAAGGGCAACGT 60.545 55.000 0.00 0.00 37.60 3.99
3816 3973 0.175989 GAGAGGAGGTAAGGGCAACG 59.824 60.000 0.00 0.00 37.60 4.10
3817 3974 0.175989 CGAGAGGAGGTAAGGGCAAC 59.824 60.000 0.00 0.00 0.00 4.17
3818 3975 2.591915 CGAGAGGAGGTAAGGGCAA 58.408 57.895 0.00 0.00 0.00 4.52
3819 3976 4.356979 CGAGAGGAGGTAAGGGCA 57.643 61.111 0.00 0.00 0.00 5.36
3845 4002 3.694535 ATCCGTCTGACTCGTCATAAC 57.305 47.619 6.21 2.14 39.13 1.89
3847 4004 3.014623 ACAATCCGTCTGACTCGTCATA 58.985 45.455 6.21 0.00 39.13 2.15
3853 4010 5.232414 GCTTACATTACAATCCGTCTGACTC 59.768 44.000 6.21 0.00 0.00 3.36
3858 4015 3.871594 GCAGCTTACATTACAATCCGTCT 59.128 43.478 0.00 0.00 0.00 4.18
3862 4021 3.202906 TCCGCAGCTTACATTACAATCC 58.797 45.455 0.00 0.00 0.00 3.01
3868 4027 5.694910 GCTACTAATTCCGCAGCTTACATTA 59.305 40.000 0.00 0.00 0.00 1.90
3878 4037 0.533491 ACCACGCTACTAATTCCGCA 59.467 50.000 0.00 0.00 0.00 5.69
3895 4054 8.546597 AATACAATTTGTTAAAAGATGCCACC 57.453 30.769 7.45 0.00 0.00 4.61
3914 4074 6.425721 GCTTACCGCATCACCTATTAATACAA 59.574 38.462 0.00 0.00 38.92 2.41
3933 4093 5.407387 TGATTTCTTTACACGAGTGCTTACC 59.593 40.000 2.76 0.00 0.00 2.85
3936 4096 5.297547 TCTGATTTCTTTACACGAGTGCTT 58.702 37.500 2.76 0.00 0.00 3.91
3944 4104 5.098211 GCCAGCAATCTGATTTCTTTACAC 58.902 41.667 0.00 0.00 42.95 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.