Multiple sequence alignment - TraesCS6A01G329900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G329900 chr6A 100.000 4072 0 0 1 4072 562811563 562815634 0.000000e+00 7520.0
1 TraesCS6A01G329900 chr6A 80.858 1609 197 72 1886 3462 562869208 562870737 0.000000e+00 1162.0
2 TraesCS6A01G329900 chr6A 88.619 905 78 14 1857 2758 562704433 562705315 0.000000e+00 1077.0
3 TraesCS6A01G329900 chr6A 82.049 1220 146 45 2080 3271 562920348 562921522 0.000000e+00 972.0
4 TraesCS6A01G329900 chr6A 81.426 1276 130 53 2080 3283 562796867 562798107 0.000000e+00 944.0
5 TraesCS6A01G329900 chr6A 82.651 1026 128 34 2081 3071 562762220 562763230 0.000000e+00 863.0
6 TraesCS6A01G329900 chr6A 85.686 503 60 7 3577 4069 180193084 180193584 1.680000e-143 520.0
7 TraesCS6A01G329900 chr6A 94.037 218 12 1 1001 1218 562703330 562703546 3.030000e-86 329.0
8 TraesCS6A01G329900 chr6A 92.462 199 15 0 1001 1199 562794899 562795097 6.660000e-73 285.0
9 TraesCS6A01G329900 chr6A 100.000 29 0 0 861 889 562703151 562703179 2.000000e-03 54.7
10 TraesCS6A01G329900 chr6B 92.098 1468 69 19 1608 3050 632503189 632504634 0.000000e+00 2025.0
11 TraesCS6A01G329900 chr6B 83.726 1315 153 40 2080 3363 632565419 632566703 0.000000e+00 1186.0
12 TraesCS6A01G329900 chr6B 90.629 875 62 11 1884 2758 632242744 632243598 0.000000e+00 1144.0
13 TraesCS6A01G329900 chr6B 80.805 1417 179 60 1884 3271 632787104 632788456 0.000000e+00 1024.0
14 TraesCS6A01G329900 chr6B 82.993 1029 125 34 2080 3072 632304760 632305774 0.000000e+00 885.0
15 TraesCS6A01G329900 chr6B 82.206 680 71 16 222 858 632496089 632496761 1.290000e-149 540.0
16 TraesCS6A01G329900 chr6B 88.525 366 23 14 1047 1403 632502793 632503148 3.760000e-115 425.0
17 TraesCS6A01G329900 chr6B 92.233 206 16 0 1001 1206 632241263 632241468 3.980000e-75 292.0
18 TraesCS6A01G329900 chr6B 91.346 208 16 2 1002 1207 632564070 632564277 2.400000e-72 283.0
19 TraesCS6A01G329900 chr6B 91.960 199 16 0 1001 1199 632419937 632420135 3.100000e-71 279.0
20 TraesCS6A01G329900 chr6B 91.860 172 10 1 3142 3313 632504777 632504944 1.890000e-58 237.0
21 TraesCS6A01G329900 chr6B 84.490 245 23 9 3311 3553 632522635 632522866 1.140000e-55 228.0
22 TraesCS6A01G329900 chr6B 96.154 78 3 0 1886 1963 632565259 632565336 1.190000e-25 128.0
23 TraesCS6A01G329900 chr6D 94.527 1206 38 11 1884 3070 419614588 419615784 0.000000e+00 1836.0
24 TraesCS6A01G329900 chr6D 89.347 873 72 12 1886 2758 419285944 419286795 0.000000e+00 1077.0
25 TraesCS6A01G329900 chr6D 81.434 1395 176 54 1886 3265 419657292 419658618 0.000000e+00 1064.0
26 TraesCS6A01G329900 chr6D 84.615 1014 130 16 2080 3071 419748457 419749466 0.000000e+00 985.0
27 TraesCS6A01G329900 chr6D 81.235 1263 146 52 2080 3283 419485070 419486300 0.000000e+00 935.0
28 TraesCS6A01G329900 chr6D 84.301 930 118 19 2080 2985 419447742 419448667 0.000000e+00 883.0
29 TraesCS6A01G329900 chr6D 83.137 593 53 12 307 852 419613080 419613672 7.860000e-137 497.0
30 TraesCS6A01G329900 chr6D 91.354 347 19 8 958 1293 419614225 419614571 7.970000e-127 464.0
31 TraesCS6A01G329900 chr6D 82.522 452 65 5 3631 4072 385714746 385715193 6.380000e-103 385.0
32 TraesCS6A01G329900 chr6D 87.267 322 40 1 1 322 419603122 419603442 2.310000e-97 366.0
33 TraesCS6A01G329900 chr6D 93.578 218 13 1 1001 1218 419284355 419284571 1.410000e-84 324.0
34 TraesCS6A01G329900 chr6D 85.106 329 21 8 3224 3550 419616050 419616352 1.100000e-80 311.0
35 TraesCS6A01G329900 chr6D 91.960 199 16 0 1001 1199 419482497 419482695 3.100000e-71 279.0
36 TraesCS6A01G329900 chr6D 87.391 230 25 4 988 1214 419444618 419444846 1.120000e-65 261.0
37 TraesCS6A01G329900 chr6D 88.073 109 9 4 1884 1991 419748293 419748398 4.270000e-25 126.0
38 TraesCS6A01G329900 chr6D 89.552 67 3 1 894 956 419614133 419614199 9.380000e-12 82.4
39 TraesCS6A01G329900 chr7A 86.680 503 55 7 3577 4069 412729629 412729129 7.700000e-152 547.0
40 TraesCS6A01G329900 chr4A 86.083 503 58 7 3577 4069 712005903 712005403 7.750000e-147 531.0
41 TraesCS6A01G329900 chr3D 83.002 453 61 7 3631 4072 121264013 121263566 2.950000e-106 396.0
42 TraesCS6A01G329900 chr7D 82.080 452 68 4 3631 4072 367190098 367190546 1.380000e-99 374.0
43 TraesCS6A01G329900 chr5B 83.095 420 58 4 3631 4040 487460434 487460850 1.790000e-98 370.0
44 TraesCS6A01G329900 chr5D 87.077 325 38 3 3750 4072 509957104 509957426 8.320000e-97 364.0
45 TraesCS6A01G329900 chr1B 84.356 326 44 6 3750 4072 502381144 502381465 3.060000e-81 313.0
46 TraesCS6A01G329900 chr2D 85.393 89 5 4 1402 1486 24439820 24439904 7.250000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G329900 chr6A 562811563 562815634 4071 False 7520.000000 7520 100.000000 1 4072 1 chr6A.!!$F3 4071
1 TraesCS6A01G329900 chr6A 562869208 562870737 1529 False 1162.000000 1162 80.858000 1886 3462 1 chr6A.!!$F4 1576
2 TraesCS6A01G329900 chr6A 562920348 562921522 1174 False 972.000000 972 82.049000 2080 3271 1 chr6A.!!$F5 1191
3 TraesCS6A01G329900 chr6A 562762220 562763230 1010 False 863.000000 863 82.651000 2081 3071 1 chr6A.!!$F2 990
4 TraesCS6A01G329900 chr6A 562794899 562798107 3208 False 614.500000 944 86.944000 1001 3283 2 chr6A.!!$F7 2282
5 TraesCS6A01G329900 chr6A 180193084 180193584 500 False 520.000000 520 85.686000 3577 4069 1 chr6A.!!$F1 492
6 TraesCS6A01G329900 chr6A 562703151 562705315 2164 False 486.900000 1077 94.218667 861 2758 3 chr6A.!!$F6 1897
7 TraesCS6A01G329900 chr6B 632787104 632788456 1352 False 1024.000000 1024 80.805000 1884 3271 1 chr6B.!!$F5 1387
8 TraesCS6A01G329900 chr6B 632502793 632504944 2151 False 895.666667 2025 90.827667 1047 3313 3 chr6B.!!$F7 2266
9 TraesCS6A01G329900 chr6B 632304760 632305774 1014 False 885.000000 885 82.993000 2080 3072 1 chr6B.!!$F1 992
10 TraesCS6A01G329900 chr6B 632241263 632243598 2335 False 718.000000 1144 91.431000 1001 2758 2 chr6B.!!$F6 1757
11 TraesCS6A01G329900 chr6B 632496089 632496761 672 False 540.000000 540 82.206000 222 858 1 chr6B.!!$F3 636
12 TraesCS6A01G329900 chr6B 632564070 632566703 2633 False 532.333333 1186 90.408667 1002 3363 3 chr6B.!!$F8 2361
13 TraesCS6A01G329900 chr6D 419657292 419658618 1326 False 1064.000000 1064 81.434000 1886 3265 1 chr6D.!!$F3 1379
14 TraesCS6A01G329900 chr6D 419284355 419286795 2440 False 700.500000 1077 91.462500 1001 2758 2 chr6D.!!$F4 1757
15 TraesCS6A01G329900 chr6D 419613080 419616352 3272 False 638.080000 1836 88.735200 307 3550 5 chr6D.!!$F7 3243
16 TraesCS6A01G329900 chr6D 419482497 419486300 3803 False 607.000000 935 86.597500 1001 3283 2 chr6D.!!$F6 2282
17 TraesCS6A01G329900 chr6D 419444618 419448667 4049 False 572.000000 883 85.846000 988 2985 2 chr6D.!!$F5 1997
18 TraesCS6A01G329900 chr6D 419748293 419749466 1173 False 555.500000 985 86.344000 1884 3071 2 chr6D.!!$F8 1187
19 TraesCS6A01G329900 chr7A 412729129 412729629 500 True 547.000000 547 86.680000 3577 4069 1 chr7A.!!$R1 492
20 TraesCS6A01G329900 chr4A 712005403 712005903 500 True 531.000000 531 86.083000 3577 4069 1 chr4A.!!$R1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.031585 CCCGCCGAAGAACATATCGA 59.968 55.0 0.0 0.0 41.43 3.59 F
184 185 0.035439 GGGACTCAGCGGATTTTGGA 60.035 55.0 0.0 0.0 0.00 3.53 F
748 791 0.106268 TGGTTTGAGCCTGAGCCAAA 60.106 50.0 0.0 0.0 41.25 3.28 F
2034 7423 0.038159 ACGACAGAGTACCAAGCTGC 60.038 55.0 0.0 0.0 33.03 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1417 4108 0.171903 ATTCACGTAAGGACCGACCG 59.828 55.000 0.00 0.0 44.74 4.79 R
1612 4613 0.648441 GCATGCATGGACATTTTGCG 59.352 50.000 27.34 0.0 39.23 4.85 R
2039 7428 1.699634 ACCACATGTCAGTAACAGGCT 59.300 47.619 0.00 0.0 43.45 4.58 R
3688 9361 0.523519 GAGCCAAAGAAAGGGAAGCG 59.476 55.000 0.00 0.0 0.00 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.195002 CCCACACGCGCCATACTG 61.195 66.667 5.73 0.00 0.00 2.74
18 19 3.195002 CCACACGCGCCATACTGG 61.195 66.667 5.73 0.00 41.55 4.00
19 20 3.195002 CACACGCGCCATACTGGG 61.195 66.667 5.73 0.00 38.19 4.45
28 29 4.169696 CATACTGGGCCCGCCGAA 62.170 66.667 19.37 0.00 36.85 4.30
29 30 3.861797 ATACTGGGCCCGCCGAAG 61.862 66.667 19.37 11.30 36.85 3.79
34 35 4.796495 GGGCCCGCCGAAGAACAT 62.796 66.667 5.69 0.00 36.85 2.71
35 36 2.188469 GGCCCGCCGAAGAACATA 59.812 61.111 0.00 0.00 0.00 2.29
36 37 1.227853 GGCCCGCCGAAGAACATAT 60.228 57.895 0.00 0.00 0.00 1.78
37 38 1.228657 GGCCCGCCGAAGAACATATC 61.229 60.000 0.00 0.00 0.00 1.63
38 39 1.557443 GCCCGCCGAAGAACATATCG 61.557 60.000 0.00 0.00 38.74 2.92
39 40 0.031585 CCCGCCGAAGAACATATCGA 59.968 55.000 0.00 0.00 41.43 3.59
40 41 1.537348 CCCGCCGAAGAACATATCGAA 60.537 52.381 0.00 0.00 41.43 3.71
41 42 1.521423 CCGCCGAAGAACATATCGAAC 59.479 52.381 0.00 0.00 41.43 3.95
42 43 1.187271 CGCCGAAGAACATATCGAACG 59.813 52.381 0.00 0.00 41.43 3.95
43 44 1.071436 GCCGAAGAACATATCGAACGC 60.071 52.381 0.00 0.00 41.43 4.84
44 45 1.187271 CCGAAGAACATATCGAACGCG 59.813 52.381 3.53 3.53 41.43 6.01
45 46 1.394345 CGAAGAACATATCGAACGCGC 60.394 52.381 5.73 0.00 41.43 6.86
46 47 0.928229 AAGAACATATCGAACGCGCC 59.072 50.000 5.73 0.00 37.46 6.53
47 48 0.874607 AGAACATATCGAACGCGCCC 60.875 55.000 5.73 0.00 37.46 6.13
48 49 2.142418 GAACATATCGAACGCGCCCG 62.142 60.000 5.73 10.62 41.14 6.13
49 50 4.059459 CATATCGAACGCGCCCGC 62.059 66.667 5.73 1.98 38.22 6.13
50 51 4.578898 ATATCGAACGCGCCCGCA 62.579 61.111 5.73 1.61 42.06 5.69
75 76 2.892640 CCGAAGGCGTGGAGATCA 59.107 61.111 0.00 0.00 46.14 2.92
76 77 1.218047 CCGAAGGCGTGGAGATCAA 59.782 57.895 0.00 0.00 46.14 2.57
77 78 0.807667 CCGAAGGCGTGGAGATCAAG 60.808 60.000 0.00 0.00 46.14 3.02
78 79 0.108615 CGAAGGCGTGGAGATCAAGT 60.109 55.000 0.00 0.00 0.00 3.16
79 80 1.646189 GAAGGCGTGGAGATCAAGTC 58.354 55.000 0.00 0.00 0.00 3.01
80 81 1.205893 GAAGGCGTGGAGATCAAGTCT 59.794 52.381 0.00 0.00 41.38 3.24
81 82 0.534412 AGGCGTGGAGATCAAGTCTG 59.466 55.000 0.00 0.00 38.33 3.51
82 83 0.460987 GGCGTGGAGATCAAGTCTGG 60.461 60.000 0.00 0.00 37.29 3.86
83 84 1.086634 GCGTGGAGATCAAGTCTGGC 61.087 60.000 0.00 0.00 37.29 4.85
84 85 0.534412 CGTGGAGATCAAGTCTGGCT 59.466 55.000 0.00 0.00 37.29 4.75
85 86 1.738365 CGTGGAGATCAAGTCTGGCTG 60.738 57.143 0.00 0.00 37.29 4.85
86 87 0.251354 TGGAGATCAAGTCTGGCTGC 59.749 55.000 0.00 0.00 37.29 5.25
87 88 0.540923 GGAGATCAAGTCTGGCTGCT 59.459 55.000 0.00 0.00 37.29 4.24
88 89 1.759445 GGAGATCAAGTCTGGCTGCTA 59.241 52.381 0.00 0.00 37.29 3.49
89 90 2.482839 GGAGATCAAGTCTGGCTGCTAC 60.483 54.545 0.00 0.00 37.29 3.58
90 91 2.167281 GAGATCAAGTCTGGCTGCTACA 59.833 50.000 0.00 0.00 37.29 2.74
91 92 2.168106 AGATCAAGTCTGGCTGCTACAG 59.832 50.000 0.00 0.00 35.31 2.74
102 103 4.082523 GCTACAGCACCGCCTCCA 62.083 66.667 0.00 0.00 41.59 3.86
103 104 2.125512 CTACAGCACCGCCTCCAC 60.126 66.667 0.00 0.00 0.00 4.02
104 105 3.665675 CTACAGCACCGCCTCCACC 62.666 68.421 0.00 0.00 0.00 4.61
109 110 4.704833 CACCGCCTCCACCCACTG 62.705 72.222 0.00 0.00 0.00 3.66
110 111 4.954118 ACCGCCTCCACCCACTGA 62.954 66.667 0.00 0.00 0.00 3.41
111 112 3.636231 CCGCCTCCACCCACTGAA 61.636 66.667 0.00 0.00 0.00 3.02
112 113 2.358737 CGCCTCCACCCACTGAAC 60.359 66.667 0.00 0.00 0.00 3.18
113 114 2.034221 GCCTCCACCCACTGAACC 59.966 66.667 0.00 0.00 0.00 3.62
114 115 2.829384 GCCTCCACCCACTGAACCA 61.829 63.158 0.00 0.00 0.00 3.67
115 116 1.073199 CCTCCACCCACTGAACCAC 59.927 63.158 0.00 0.00 0.00 4.16
116 117 1.705002 CCTCCACCCACTGAACCACA 61.705 60.000 0.00 0.00 0.00 4.17
117 118 0.535102 CTCCACCCACTGAACCACAC 60.535 60.000 0.00 0.00 0.00 3.82
118 119 1.528309 CCACCCACTGAACCACACC 60.528 63.158 0.00 0.00 0.00 4.16
119 120 1.225983 CACCCACTGAACCACACCA 59.774 57.895 0.00 0.00 0.00 4.17
120 121 1.101049 CACCCACTGAACCACACCAC 61.101 60.000 0.00 0.00 0.00 4.16
121 122 1.279025 ACCCACTGAACCACACCACT 61.279 55.000 0.00 0.00 0.00 4.00
122 123 0.762418 CCCACTGAACCACACCACTA 59.238 55.000 0.00 0.00 0.00 2.74
123 124 1.270839 CCCACTGAACCACACCACTAG 60.271 57.143 0.00 0.00 0.00 2.57
124 125 1.512926 CACTGAACCACACCACTAGC 58.487 55.000 0.00 0.00 0.00 3.42
125 126 1.128200 ACTGAACCACACCACTAGCA 58.872 50.000 0.00 0.00 0.00 3.49
126 127 1.070758 ACTGAACCACACCACTAGCAG 59.929 52.381 0.00 0.00 0.00 4.24
127 128 0.250295 TGAACCACACCACTAGCAGC 60.250 55.000 0.00 0.00 0.00 5.25
128 129 0.955919 GAACCACACCACTAGCAGCC 60.956 60.000 0.00 0.00 0.00 4.85
129 130 1.705002 AACCACACCACTAGCAGCCA 61.705 55.000 0.00 0.00 0.00 4.75
130 131 1.300963 CCACACCACTAGCAGCCAT 59.699 57.895 0.00 0.00 0.00 4.40
131 132 0.745845 CCACACCACTAGCAGCCATC 60.746 60.000 0.00 0.00 0.00 3.51
132 133 1.086067 CACACCACTAGCAGCCATCG 61.086 60.000 0.00 0.00 0.00 3.84
133 134 2.176273 CACCACTAGCAGCCATCGC 61.176 63.158 0.00 0.00 0.00 4.58
134 135 2.590007 CCACTAGCAGCCATCGCC 60.590 66.667 0.00 0.00 34.57 5.54
135 136 2.963854 CACTAGCAGCCATCGCCG 60.964 66.667 0.00 0.00 34.57 6.46
136 137 4.899239 ACTAGCAGCCATCGCCGC 62.899 66.667 0.00 0.00 38.79 6.53
140 141 3.941836 GCAGCCATCGCCGCTAAC 61.942 66.667 0.00 0.00 35.41 2.34
141 142 3.272334 CAGCCATCGCCGCTAACC 61.272 66.667 0.00 0.00 33.91 2.85
142 143 3.470888 AGCCATCGCCGCTAACCT 61.471 61.111 0.00 0.00 33.91 3.50
143 144 2.513897 GCCATCGCCGCTAACCTT 60.514 61.111 0.00 0.00 0.00 3.50
144 145 2.823829 GCCATCGCCGCTAACCTTG 61.824 63.158 0.00 0.00 0.00 3.61
145 146 2.180204 CCATCGCCGCTAACCTTGG 61.180 63.158 0.00 0.00 0.00 3.61
146 147 2.513897 ATCGCCGCTAACCTTGGC 60.514 61.111 0.00 0.00 45.39 4.52
147 148 4.770874 TCGCCGCTAACCTTGGCC 62.771 66.667 0.00 0.00 46.12 5.36
150 151 4.041762 CCGCTAACCTTGGCCCCA 62.042 66.667 0.00 0.00 0.00 4.96
151 152 2.034999 CGCTAACCTTGGCCCCAA 59.965 61.111 0.00 0.00 0.00 4.12
162 163 2.991540 GCCCCAAGCCAGAACACC 60.992 66.667 0.00 0.00 34.35 4.16
163 164 2.520458 CCCCAAGCCAGAACACCA 59.480 61.111 0.00 0.00 0.00 4.17
164 165 1.077265 CCCCAAGCCAGAACACCAT 59.923 57.895 0.00 0.00 0.00 3.55
165 166 1.252904 CCCCAAGCCAGAACACCATG 61.253 60.000 0.00 0.00 0.00 3.66
166 167 1.252904 CCCAAGCCAGAACACCATGG 61.253 60.000 11.19 11.19 39.73 3.66
167 168 1.252904 CCAAGCCAGAACACCATGGG 61.253 60.000 18.09 7.72 37.05 4.00
168 169 0.251297 CAAGCCAGAACACCATGGGA 60.251 55.000 18.09 0.00 37.05 4.37
169 170 0.251341 AAGCCAGAACACCATGGGAC 60.251 55.000 18.09 4.20 37.05 4.46
170 171 1.136329 AGCCAGAACACCATGGGACT 61.136 55.000 18.09 6.56 37.05 3.85
171 172 0.678048 GCCAGAACACCATGGGACTC 60.678 60.000 18.09 8.85 37.05 3.36
172 173 0.692476 CCAGAACACCATGGGACTCA 59.308 55.000 18.09 0.00 32.63 3.41
173 174 1.339438 CCAGAACACCATGGGACTCAG 60.339 57.143 18.09 5.74 32.63 3.35
174 175 0.326264 AGAACACCATGGGACTCAGC 59.674 55.000 18.09 0.00 0.00 4.26
175 176 1.003355 AACACCATGGGACTCAGCG 60.003 57.895 18.09 0.00 0.00 5.18
176 177 2.124983 CACCATGGGACTCAGCGG 60.125 66.667 18.09 0.00 0.00 5.52
177 178 2.284625 ACCATGGGACTCAGCGGA 60.285 61.111 18.09 0.00 0.00 5.54
178 179 1.690633 ACCATGGGACTCAGCGGAT 60.691 57.895 18.09 0.00 0.00 4.18
179 180 1.274703 ACCATGGGACTCAGCGGATT 61.275 55.000 18.09 0.00 0.00 3.01
180 181 0.107017 CCATGGGACTCAGCGGATTT 60.107 55.000 2.85 0.00 0.00 2.17
181 182 1.683011 CCATGGGACTCAGCGGATTTT 60.683 52.381 2.85 0.00 0.00 1.82
182 183 1.402968 CATGGGACTCAGCGGATTTTG 59.597 52.381 0.00 0.00 0.00 2.44
183 184 0.322456 TGGGACTCAGCGGATTTTGG 60.322 55.000 0.00 0.00 0.00 3.28
184 185 0.035439 GGGACTCAGCGGATTTTGGA 60.035 55.000 0.00 0.00 0.00 3.53
185 186 1.408822 GGGACTCAGCGGATTTTGGAT 60.409 52.381 0.00 0.00 0.00 3.41
186 187 2.369394 GGACTCAGCGGATTTTGGATT 58.631 47.619 0.00 0.00 0.00 3.01
187 188 2.755103 GGACTCAGCGGATTTTGGATTT 59.245 45.455 0.00 0.00 0.00 2.17
188 189 3.428045 GGACTCAGCGGATTTTGGATTTG 60.428 47.826 0.00 0.00 0.00 2.32
189 190 3.420893 ACTCAGCGGATTTTGGATTTGA 58.579 40.909 0.00 0.00 0.00 2.69
190 191 3.191371 ACTCAGCGGATTTTGGATTTGAC 59.809 43.478 0.00 0.00 0.00 3.18
191 192 3.153130 TCAGCGGATTTTGGATTTGACA 58.847 40.909 0.00 0.00 0.00 3.58
192 193 3.191162 TCAGCGGATTTTGGATTTGACAG 59.809 43.478 0.00 0.00 0.00 3.51
193 194 2.493278 AGCGGATTTTGGATTTGACAGG 59.507 45.455 0.00 0.00 0.00 4.00
194 195 2.491693 GCGGATTTTGGATTTGACAGGA 59.508 45.455 0.00 0.00 0.00 3.86
195 196 3.673323 GCGGATTTTGGATTTGACAGGAC 60.673 47.826 0.00 0.00 0.00 3.85
196 197 3.426159 CGGATTTTGGATTTGACAGGACG 60.426 47.826 0.00 0.00 0.00 4.79
197 198 3.756434 GGATTTTGGATTTGACAGGACGA 59.244 43.478 0.00 0.00 0.00 4.20
198 199 4.217550 GGATTTTGGATTTGACAGGACGAA 59.782 41.667 0.00 0.00 0.00 3.85
199 200 4.829064 TTTTGGATTTGACAGGACGAAG 57.171 40.909 0.00 0.00 0.00 3.79
200 201 3.762407 TTGGATTTGACAGGACGAAGA 57.238 42.857 0.00 0.00 0.00 2.87
201 202 3.981071 TGGATTTGACAGGACGAAGAT 57.019 42.857 0.00 0.00 0.00 2.40
202 203 3.599343 TGGATTTGACAGGACGAAGATG 58.401 45.455 0.00 0.00 0.00 2.90
203 204 2.939103 GGATTTGACAGGACGAAGATGG 59.061 50.000 0.00 0.00 0.00 3.51
204 205 3.369471 GGATTTGACAGGACGAAGATGGA 60.369 47.826 0.00 0.00 0.00 3.41
205 206 3.981071 TTTGACAGGACGAAGATGGAT 57.019 42.857 0.00 0.00 0.00 3.41
206 207 3.981071 TTGACAGGACGAAGATGGATT 57.019 42.857 0.00 0.00 0.00 3.01
207 208 3.526931 TGACAGGACGAAGATGGATTC 57.473 47.619 0.00 0.00 0.00 2.52
212 213 2.931386 CGAAGATGGATTCGCCGC 59.069 61.111 0.00 0.00 44.73 6.53
213 214 1.882625 CGAAGATGGATTCGCCGCA 60.883 57.895 0.00 0.00 44.73 5.69
214 215 1.643832 GAAGATGGATTCGCCGCAC 59.356 57.895 0.00 0.00 40.66 5.34
215 216 1.776034 GAAGATGGATTCGCCGCACC 61.776 60.000 0.00 0.00 40.66 5.01
216 217 2.513666 GATGGATTCGCCGCACCA 60.514 61.111 0.00 0.00 40.66 4.17
217 218 2.514592 ATGGATTCGCCGCACCAG 60.515 61.111 0.00 0.00 40.66 4.00
218 219 2.923426 GATGGATTCGCCGCACCAGA 62.923 60.000 0.00 0.00 40.66 3.86
219 220 2.435938 GGATTCGCCGCACCAGAA 60.436 61.111 0.00 0.00 0.00 3.02
220 221 2.038269 GGATTCGCCGCACCAGAAA 61.038 57.895 0.00 0.00 0.00 2.52
242 243 1.497278 CCGCAACCATTGACGACTG 59.503 57.895 0.00 0.00 33.95 3.51
244 245 1.078709 CGCAACCATTGACGACTGAT 58.921 50.000 0.00 0.00 33.95 2.90
253 254 1.627864 TGACGACTGATGGAAGGTCA 58.372 50.000 0.00 0.00 32.51 4.02
266 267 2.128035 GAAGGTCAGTCACAACAGACG 58.872 52.381 0.00 0.00 41.47 4.18
270 271 1.663643 GTCAGTCACAACAGACGCAAA 59.336 47.619 0.00 0.00 43.24 3.68
275 276 0.817634 CACAACAGACGCAAAGGGGA 60.818 55.000 0.00 0.00 0.00 4.81
276 277 0.110486 ACAACAGACGCAAAGGGGAT 59.890 50.000 0.00 0.00 0.00 3.85
287 288 2.092212 GCAAAGGGGATGAGATGAAGGA 60.092 50.000 0.00 0.00 0.00 3.36
291 292 2.021639 AGGGGATGAGATGAAGGAAGGA 60.022 50.000 0.00 0.00 0.00 3.36
296 297 1.273041 TGAGATGAAGGAAGGACCCGA 60.273 52.381 0.00 0.00 40.05 5.14
299 300 1.278127 GATGAAGGAAGGACCCGAACA 59.722 52.381 0.00 0.00 40.05 3.18
300 301 1.133363 TGAAGGAAGGACCCGAACAA 58.867 50.000 0.00 0.00 40.05 2.83
338 339 1.065199 CACAGGGCCTGATCTAAAGCA 60.065 52.381 38.99 0.00 35.18 3.91
339 340 1.635487 ACAGGGCCTGATCTAAAGCAA 59.365 47.619 38.99 0.00 35.18 3.91
344 345 3.118992 GGGCCTGATCTAAAGCAAAAAGG 60.119 47.826 0.84 0.00 0.00 3.11
357 358 2.362077 GCAAAAAGGCCATATCCACGAT 59.638 45.455 5.01 0.00 0.00 3.73
366 367 0.880278 ATATCCACGATGCACGCACC 60.880 55.000 8.31 0.00 46.94 5.01
376 377 1.282875 GCACGCACCAGGAGTTTTC 59.717 57.895 0.00 0.00 0.00 2.29
396 397 2.174639 TCGGGCAAACATATCCCAGATT 59.825 45.455 0.00 0.00 40.05 2.40
414 415 6.428159 CCCAGATTAAAAATATCTCCTCACGG 59.572 42.308 0.00 0.00 30.05 4.94
422 423 2.757894 ATCTCCTCACGGTGTATCCT 57.242 50.000 8.17 0.00 0.00 3.24
446 447 6.130723 TCAAACAAACTATGCTCGTTTTACG 58.869 36.000 0.00 0.00 44.19 3.18
450 451 5.407387 ACAAACTATGCTCGTTTTACGTGAT 59.593 36.000 0.00 0.48 43.14 3.06
500 525 7.549488 GTGCCAAATGTTTAGTATACTGAGACT 59.451 37.037 15.90 0.00 0.00 3.24
533 558 4.105486 TCAGTCGATGCTAAATTCGTGAG 58.895 43.478 0.00 0.00 36.74 3.51
541 566 6.417930 CGATGCTAAATTCGTGAGATCTTACA 59.582 38.462 16.95 0.00 41.60 2.41
606 644 1.542492 TGACTAAGTCCCAGTCGACC 58.458 55.000 13.01 0.00 44.44 4.79
612 650 0.323542 AGTCCCAGTCGACCGAGATT 60.324 55.000 13.01 0.05 32.91 2.40
616 654 1.749634 CCCAGTCGACCGAGATTTAGT 59.250 52.381 13.01 0.00 0.00 2.24
621 659 3.127203 AGTCGACCGAGATTTAGTCACAG 59.873 47.826 13.01 0.00 0.00 3.66
693 736 7.057264 TCTCTGCAACTCTACTGTATCTGTAT 58.943 38.462 0.00 0.00 0.00 2.29
697 740 5.460419 GCAACTCTACTGTATCTGTATGTGC 59.540 44.000 0.00 0.00 0.00 4.57
709 752 1.879380 TGTATGTGCTGTCCAGTTTGC 59.121 47.619 0.00 0.00 0.00 3.68
715 758 0.536006 GCTGTCCAGTTTGCCTCAGT 60.536 55.000 0.00 0.00 0.00 3.41
732 775 3.632333 TCAGTATCCATCTCGAGTTGGT 58.368 45.455 31.89 23.70 36.52 3.67
748 791 0.106268 TGGTTTGAGCCTGAGCCAAA 60.106 50.000 0.00 0.00 41.25 3.28
890 1357 4.022242 GCCTCTATATAAACGAGACAGCCA 60.022 45.833 0.00 0.00 0.00 4.75
891 1358 5.336849 GCCTCTATATAAACGAGACAGCCAT 60.337 44.000 0.00 0.00 0.00 4.40
892 1359 6.692486 CCTCTATATAAACGAGACAGCCATT 58.308 40.000 0.00 0.00 0.00 3.16
915 1396 0.107508 CATCACAGCCATTCCTCGGT 60.108 55.000 0.00 0.00 0.00 4.69
921 1402 1.041437 AGCCATTCCTCGGTAGTAGC 58.959 55.000 0.00 0.00 0.00 3.58
950 1435 0.466739 TCGGGCTCGAGCTACCATAA 60.467 55.000 34.46 14.66 40.88 1.90
967 1476 9.216117 GCTACCATAACTACAAGAGAAGAAAAA 57.784 33.333 0.00 0.00 0.00 1.94
986 1495 0.663153 ACACTCGCAAACTTCCAAGC 59.337 50.000 0.00 0.00 0.00 4.01
1160 1696 1.444895 GTAACATCGTCGCCACCGT 60.445 57.895 0.00 0.00 35.54 4.83
1214 1757 5.128499 AGAGGTAACAACTCATCTCATCCAG 59.872 44.000 0.00 0.00 37.43 3.86
1242 3019 1.634757 CGCCAATCGTGTGCAAGCTA 61.635 55.000 0.00 0.00 0.00 3.32
1289 3069 3.058293 CACCACACGTACAAATTGCTCAT 60.058 43.478 0.00 0.00 0.00 2.90
1293 3073 3.190535 ACACGTACAAATTGCTCATTCCC 59.809 43.478 0.00 0.00 0.00 3.97
1357 4047 8.483758 CCAGAAAAGTAGTACATACATACCCTT 58.516 37.037 2.52 0.00 36.79 3.95
1404 4095 9.797642 ATGCATCTTGATACCTTATTGTATTCA 57.202 29.630 0.00 0.00 31.67 2.57
1417 4108 9.559958 CCTTATTGTATTCAGTTTTGTCATGTC 57.440 33.333 0.00 0.00 0.00 3.06
1418 4109 9.265938 CTTATTGTATTCAGTTTTGTCATGTCG 57.734 33.333 0.00 0.00 0.00 4.35
1419 4110 5.605564 TGTATTCAGTTTTGTCATGTCGG 57.394 39.130 0.00 0.00 0.00 4.79
1421 4112 4.749245 ATTCAGTTTTGTCATGTCGGTC 57.251 40.909 0.00 0.00 0.00 4.79
1423 4114 1.194547 CAGTTTTGTCATGTCGGTCGG 59.805 52.381 0.00 0.00 0.00 4.79
1424 4115 1.202604 AGTTTTGTCATGTCGGTCGGT 60.203 47.619 0.00 0.00 0.00 4.69
1425 4116 1.193874 GTTTTGTCATGTCGGTCGGTC 59.806 52.381 0.00 0.00 0.00 4.79
1426 4117 0.320073 TTTGTCATGTCGGTCGGTCC 60.320 55.000 0.00 0.00 0.00 4.46
1427 4118 1.183030 TTGTCATGTCGGTCGGTCCT 61.183 55.000 0.00 0.00 0.00 3.85
1428 4119 1.183030 TGTCATGTCGGTCGGTCCTT 61.183 55.000 0.00 0.00 0.00 3.36
1429 4120 0.813184 GTCATGTCGGTCGGTCCTTA 59.187 55.000 0.00 0.00 0.00 2.69
1430 4121 0.813184 TCATGTCGGTCGGTCCTTAC 59.187 55.000 0.00 0.00 0.00 2.34
1431 4122 0.524816 CATGTCGGTCGGTCCTTACG 60.525 60.000 0.00 0.00 0.00 3.18
1433 4124 1.154150 GTCGGTCGGTCCTTACGTG 60.154 63.158 0.00 0.00 0.00 4.49
1434 4125 1.302431 TCGGTCGGTCCTTACGTGA 60.302 57.895 0.00 0.00 0.00 4.35
1435 4126 0.888736 TCGGTCGGTCCTTACGTGAA 60.889 55.000 0.00 0.00 0.00 3.18
1436 4127 0.171903 CGGTCGGTCCTTACGTGAAT 59.828 55.000 0.00 0.00 0.00 2.57
1437 4128 1.403249 CGGTCGGTCCTTACGTGAATT 60.403 52.381 0.00 0.00 0.00 2.17
1438 4129 1.997606 GGTCGGTCCTTACGTGAATTG 59.002 52.381 0.00 0.00 0.00 2.32
1439 4130 2.611224 GGTCGGTCCTTACGTGAATTGT 60.611 50.000 0.00 0.00 0.00 2.71
1440 4131 3.367292 GGTCGGTCCTTACGTGAATTGTA 60.367 47.826 0.00 0.00 0.00 2.41
1442 4133 4.866486 GTCGGTCCTTACGTGAATTGTATT 59.134 41.667 0.00 0.00 0.00 1.89
1443 4134 5.349543 GTCGGTCCTTACGTGAATTGTATTT 59.650 40.000 0.00 0.00 0.00 1.40
1445 4136 6.019152 CGGTCCTTACGTGAATTGTATTTTG 58.981 40.000 0.00 0.00 0.00 2.44
1447 4138 7.413657 CGGTCCTTACGTGAATTGTATTTTGAT 60.414 37.037 0.00 0.00 0.00 2.57
1450 4141 9.226606 TCCTTACGTGAATTGTATTTTGATCTT 57.773 29.630 0.00 0.00 0.00 2.40
1451 4142 9.840427 CCTTACGTGAATTGTATTTTGATCTTT 57.160 29.630 0.00 0.00 0.00 2.52
1478 4308 6.760770 TGATAGAAATCACGTATTGTCATGCA 59.239 34.615 0.00 0.00 37.20 3.96
1481 4311 6.676950 AGAAATCACGTATTGTCATGCAAAA 58.323 32.000 6.65 0.00 40.91 2.44
1482 4312 7.144661 AGAAATCACGTATTGTCATGCAAAAA 58.855 30.769 6.65 0.00 40.91 1.94
1505 4498 5.728637 AAAAGCTATCCCCTTTTCTTGTG 57.271 39.130 0.00 0.00 37.86 3.33
1509 4502 2.951229 ATCCCCTTTTCTTGTGACGT 57.049 45.000 0.00 0.00 0.00 4.34
1520 4521 5.666969 TTCTTGTGACGTGTCAAATAAGG 57.333 39.130 3.92 0.00 41.85 2.69
1521 4522 3.496884 TCTTGTGACGTGTCAAATAAGGC 59.503 43.478 3.92 0.00 41.85 4.35
1522 4523 3.120321 TGTGACGTGTCAAATAAGGCT 57.880 42.857 3.92 0.00 41.85 4.58
1525 4526 3.684788 GTGACGTGTCAAATAAGGCTGAT 59.315 43.478 3.92 0.00 41.85 2.90
1526 4527 3.932710 TGACGTGTCAAATAAGGCTGATC 59.067 43.478 0.00 0.00 36.53 2.92
1527 4528 3.932710 GACGTGTCAAATAAGGCTGATCA 59.067 43.478 0.00 0.00 0.00 2.92
1529 4530 5.670485 ACGTGTCAAATAAGGCTGATCATA 58.330 37.500 0.00 0.00 0.00 2.15
1530 4531 5.755375 ACGTGTCAAATAAGGCTGATCATAG 59.245 40.000 0.00 0.00 0.00 2.23
1531 4532 5.333645 CGTGTCAAATAAGGCTGATCATAGC 60.334 44.000 0.00 0.00 42.94 2.97
1532 4533 4.751600 TGTCAAATAAGGCTGATCATAGCG 59.248 41.667 0.00 0.00 44.60 4.26
1534 4535 4.040339 TCAAATAAGGCTGATCATAGCGGA 59.960 41.667 0.00 0.00 44.60 5.54
1535 4536 4.623932 AATAAGGCTGATCATAGCGGAA 57.376 40.909 0.00 0.00 44.60 4.30
1536 4537 2.540265 AAGGCTGATCATAGCGGAAG 57.460 50.000 0.00 0.00 44.60 3.46
1537 4538 1.418334 AGGCTGATCATAGCGGAAGT 58.582 50.000 0.00 0.00 44.60 3.01
1538 4539 2.598565 AGGCTGATCATAGCGGAAGTA 58.401 47.619 0.00 0.00 44.60 2.24
1540 4541 3.060602 GGCTGATCATAGCGGAAGTAAC 58.939 50.000 0.00 0.00 44.60 2.50
1541 4542 3.243907 GGCTGATCATAGCGGAAGTAACT 60.244 47.826 0.00 0.00 44.60 2.24
1543 4544 5.509163 GGCTGATCATAGCGGAAGTAACTTA 60.509 44.000 0.00 0.00 44.60 2.24
1544 4545 5.631512 GCTGATCATAGCGGAAGTAACTTAG 59.368 44.000 0.00 0.00 33.46 2.18
1545 4546 5.529791 TGATCATAGCGGAAGTAACTTAGC 58.470 41.667 0.00 0.00 0.00 3.09
1546 4547 5.302059 TGATCATAGCGGAAGTAACTTAGCT 59.698 40.000 0.00 0.00 39.52 3.32
1547 4548 6.489022 TGATCATAGCGGAAGTAACTTAGCTA 59.511 38.462 11.60 11.60 40.85 3.32
1548 4549 6.896021 TCATAGCGGAAGTAACTTAGCTAT 57.104 37.500 14.28 14.28 43.90 2.97
1550 4551 6.651975 ATAGCGGAAGTAACTTAGCTATGT 57.348 37.500 17.46 6.46 42.76 2.29
1551 4552 4.683832 AGCGGAAGTAACTTAGCTATGTG 58.316 43.478 12.62 0.75 36.37 3.21
1552 4553 3.802685 GCGGAAGTAACTTAGCTATGTGG 59.197 47.826 12.62 0.00 0.00 4.17
1553 4554 3.802685 CGGAAGTAACTTAGCTATGTGGC 59.197 47.826 12.62 8.81 0.00 5.01
1554 4555 4.679639 CGGAAGTAACTTAGCTATGTGGCA 60.680 45.833 12.62 0.00 34.17 4.92
1555 4556 5.368989 GGAAGTAACTTAGCTATGTGGCAT 58.631 41.667 12.62 2.93 34.17 4.40
1556 4557 5.237344 GGAAGTAACTTAGCTATGTGGCATG 59.763 44.000 12.62 0.00 34.17 4.06
1557 4558 5.359194 AGTAACTTAGCTATGTGGCATGT 57.641 39.130 12.62 0.00 34.17 3.21
1558 4559 6.479972 AGTAACTTAGCTATGTGGCATGTA 57.520 37.500 12.62 0.00 34.17 2.29
1559 4560 6.281405 AGTAACTTAGCTATGTGGCATGTAC 58.719 40.000 12.62 9.98 34.17 2.90
1560 4561 5.359194 AACTTAGCTATGTGGCATGTACT 57.641 39.130 12.62 0.00 34.17 2.73
1561 4562 4.697514 ACTTAGCTATGTGGCATGTACTG 58.302 43.478 11.24 0.00 34.17 2.74
1562 4563 4.405680 ACTTAGCTATGTGGCATGTACTGA 59.594 41.667 11.24 0.00 34.17 3.41
1563 4564 3.912496 AGCTATGTGGCATGTACTGAA 57.088 42.857 0.00 0.00 34.17 3.02
1564 4565 4.428294 AGCTATGTGGCATGTACTGAAT 57.572 40.909 0.00 0.00 34.17 2.57
1565 4566 5.551305 AGCTATGTGGCATGTACTGAATA 57.449 39.130 0.00 0.00 34.17 1.75
1566 4567 5.928976 AGCTATGTGGCATGTACTGAATAA 58.071 37.500 0.00 0.00 34.17 1.40
1567 4568 6.356556 AGCTATGTGGCATGTACTGAATAAA 58.643 36.000 0.00 0.00 34.17 1.40
1568 4569 6.484643 AGCTATGTGGCATGTACTGAATAAAG 59.515 38.462 0.00 0.00 34.17 1.85
1569 4570 6.483307 GCTATGTGGCATGTACTGAATAAAGA 59.517 38.462 0.00 0.00 0.00 2.52
1570 4571 7.012327 GCTATGTGGCATGTACTGAATAAAGAA 59.988 37.037 0.00 0.00 0.00 2.52
1571 4572 7.701539 ATGTGGCATGTACTGAATAAAGAAA 57.298 32.000 0.00 0.00 0.00 2.52
1572 4573 7.144722 TGTGGCATGTACTGAATAAAGAAAG 57.855 36.000 0.00 0.00 0.00 2.62
1573 4574 6.939730 TGTGGCATGTACTGAATAAAGAAAGA 59.060 34.615 0.00 0.00 0.00 2.52
1574 4575 7.446931 TGTGGCATGTACTGAATAAAGAAAGAA 59.553 33.333 0.00 0.00 0.00 2.52
1575 4576 7.965107 GTGGCATGTACTGAATAAAGAAAGAAG 59.035 37.037 0.00 0.00 0.00 2.85
1576 4577 7.665559 TGGCATGTACTGAATAAAGAAAGAAGT 59.334 33.333 0.00 0.00 0.00 3.01
1577 4578 7.965107 GGCATGTACTGAATAAAGAAAGAAGTG 59.035 37.037 0.00 0.00 0.00 3.16
1578 4579 8.507249 GCATGTACTGAATAAAGAAAGAAGTGT 58.493 33.333 0.00 0.00 0.00 3.55
1597 4598 9.798994 AGAAGTGTTTAGAGTAACATAATACGG 57.201 33.333 0.00 0.00 39.93 4.02
1598 4599 9.578439 GAAGTGTTTAGAGTAACATAATACGGT 57.422 33.333 0.00 0.00 39.93 4.83
1614 4615 9.519905 CATAATACGGTATTGTAACAATAACGC 57.480 33.333 23.44 0.00 44.59 4.84
1615 4616 7.536895 AATACGGTATTGTAACAATAACGCA 57.463 32.000 23.44 16.77 44.59 5.24
1616 4617 5.859521 ACGGTATTGTAACAATAACGCAA 57.140 34.783 23.44 1.39 44.59 4.85
1617 4618 6.238610 ACGGTATTGTAACAATAACGCAAA 57.761 33.333 23.44 0.00 44.59 3.68
1633 4650 2.077627 GCAAAATGTCCATGCATGCAA 58.922 42.857 26.68 8.17 39.81 4.08
1646 4669 6.038936 TCCATGCATGCAACATCTATATATGC 59.961 38.462 26.68 0.00 39.72 3.14
1669 5989 6.069615 TGCATGGATCCATCAGAATATCAGAT 60.070 38.462 24.93 0.00 33.90 2.90
1713 6041 2.225068 ATGATACACACGCAGGTAGC 57.775 50.000 0.00 0.00 40.87 3.58
1716 6044 0.175760 ATACACACGCAGGTAGCTGG 59.824 55.000 22.69 14.87 42.61 4.85
1717 6045 1.183030 TACACACGCAGGTAGCTGGT 61.183 55.000 22.69 15.47 42.61 4.00
1718 6046 2.029288 CACACGCAGGTAGCTGGTG 61.029 63.158 27.50 27.50 42.61 4.17
1719 6047 2.207229 ACACGCAGGTAGCTGGTGA 61.207 57.895 32.05 0.00 42.61 4.02
1721 6049 0.391661 CACGCAGGTAGCTGGTGATT 60.392 55.000 26.26 2.89 42.61 2.57
1722 6050 1.134818 CACGCAGGTAGCTGGTGATTA 60.135 52.381 26.26 0.00 42.61 1.75
1723 6051 1.134788 ACGCAGGTAGCTGGTGATTAC 60.135 52.381 22.69 3.95 42.61 1.89
1724 6052 1.137086 CGCAGGTAGCTGGTGATTACT 59.863 52.381 22.69 0.00 42.61 2.24
1753 6081 1.886542 GGAACCATTGTCACTTCACCC 59.113 52.381 0.00 0.00 0.00 4.61
1778 6263 3.708631 CCATCCTCAGTTCCACTCATACT 59.291 47.826 0.00 0.00 0.00 2.12
1782 7142 3.515502 CCTCAGTTCCACTCATACTTGGA 59.484 47.826 0.00 0.00 40.30 3.53
1810 7172 2.606308 CGACGTTTATACCTGGATCGGG 60.606 54.545 0.00 2.32 35.68 5.14
1848 7210 6.684686 ACATCAGAACTAGTTAACGTGCTAA 58.315 36.000 8.42 0.00 0.00 3.09
1850 7212 7.817962 ACATCAGAACTAGTTAACGTGCTAATT 59.182 33.333 8.42 0.00 0.00 1.40
1852 7214 9.865321 ATCAGAACTAGTTAACGTGCTAATTAA 57.135 29.630 8.42 0.00 0.00 1.40
2027 7416 2.159240 TCATGCATGACGACAGAGTACC 60.159 50.000 25.42 0.00 0.00 3.34
2034 7423 0.038159 ACGACAGAGTACCAAGCTGC 60.038 55.000 0.00 0.00 33.03 5.25
2035 7424 0.244994 CGACAGAGTACCAAGCTGCT 59.755 55.000 0.00 0.00 33.03 4.24
2036 7425 1.719600 GACAGAGTACCAAGCTGCTG 58.280 55.000 1.35 0.00 33.03 4.41
2037 7426 1.001406 GACAGAGTACCAAGCTGCTGT 59.999 52.381 1.35 0.00 39.10 4.40
2038 7427 1.417890 ACAGAGTACCAAGCTGCTGTT 59.582 47.619 1.35 0.00 33.19 3.16
2039 7428 2.632996 ACAGAGTACCAAGCTGCTGTTA 59.367 45.455 1.35 0.00 33.19 2.41
2040 7429 3.257393 CAGAGTACCAAGCTGCTGTTAG 58.743 50.000 1.35 0.00 0.00 2.34
2041 7430 2.003301 GAGTACCAAGCTGCTGTTAGC 58.997 52.381 1.35 0.00 44.01 3.09
2070 7474 1.333619 GACATGTGGTTTGTTGCGTCT 59.666 47.619 1.15 0.00 0.00 4.18
2077 7483 3.018149 TGGTTTGTTGCGTCTTTACCTT 58.982 40.909 0.00 0.00 0.00 3.50
2320 7726 4.308458 TCGTGCAGTTCCCGTGGG 62.308 66.667 0.00 0.00 0.00 4.61
2658 8076 3.122150 CATCGTGTCGAGGCAAAGA 57.878 52.632 0.00 0.00 39.91 2.52
2730 8148 2.810274 CGTCATGGGCTCCATAATTCTG 59.190 50.000 6.42 0.00 43.15 3.02
2817 8327 8.158169 AGTACATGCACTAATGGTATCATTTG 57.842 34.615 6.52 7.58 42.90 2.32
2824 8334 6.261826 GCACTAATGGTATCATTTGCTCTCTT 59.738 38.462 15.24 0.00 40.88 2.85
2873 8383 1.137086 GCAGTGATCATCGTGGTAGGT 59.863 52.381 0.00 0.00 0.00 3.08
2902 8412 0.747283 CTCATCTGGGGCAAGAGCAC 60.747 60.000 0.00 0.00 45.89 4.40
3076 8616 0.254178 ACCAATGGCCACTAGCTCAG 59.746 55.000 8.16 0.00 43.05 3.35
3079 8619 2.484417 CCAATGGCCACTAGCTCAGTAG 60.484 54.545 8.16 0.00 43.05 2.57
3100 8724 4.789807 AGCTACTAGTTAAGGGATCGACA 58.210 43.478 0.00 0.00 0.00 4.35
3173 8809 0.178961 GTCTGCCTTTTTCCCCTGGT 60.179 55.000 0.00 0.00 0.00 4.00
3192 8828 3.141398 GGTATGTAGTGCATGGTCCATG 58.859 50.000 25.27 25.27 43.91 3.66
3278 8944 5.065704 ACGATCCTATCATGTGACTATGC 57.934 43.478 0.00 0.00 0.00 3.14
3290 8956 2.420372 GTGACTATGCGAGACAGTGAGA 59.580 50.000 0.00 0.00 30.13 3.27
3291 8957 3.066064 GTGACTATGCGAGACAGTGAGAT 59.934 47.826 0.00 0.00 30.13 2.75
3292 8958 3.313803 TGACTATGCGAGACAGTGAGATC 59.686 47.826 0.00 0.00 0.00 2.75
3293 8959 2.289274 ACTATGCGAGACAGTGAGATCG 59.711 50.000 0.00 4.59 38.19 3.69
3391 9063 6.039941 TCCCGCATCCGATTAAACATTTAAAT 59.960 34.615 0.00 0.00 36.35 1.40
3393 9065 7.863375 CCCGCATCCGATTAAACATTTAAATTA 59.137 33.333 0.00 0.00 36.35 1.40
3497 9169 9.570488 ACTTATGTCTATAGTTTCGTGAACTTC 57.430 33.333 11.11 0.00 46.34 3.01
3500 9172 6.387465 TGTCTATAGTTTCGTGAACTTCTGG 58.613 40.000 11.11 4.11 46.34 3.86
3505 9177 1.750341 TTCGTGAACTTCTGGGCGGA 61.750 55.000 0.00 0.00 0.00 5.54
3509 9181 1.679153 GTGAACTTCTGGGCGGAAAAA 59.321 47.619 0.00 0.00 0.00 1.94
3551 9224 8.863872 AACTTCAATAGCACCTTTTATGTAGT 57.136 30.769 0.00 0.00 0.00 2.73
3552 9225 9.953565 AACTTCAATAGCACCTTTTATGTAGTA 57.046 29.630 0.00 0.00 0.00 1.82
3553 9226 9.379791 ACTTCAATAGCACCTTTTATGTAGTAC 57.620 33.333 0.00 0.00 0.00 2.73
3554 9227 9.378551 CTTCAATAGCACCTTTTATGTAGTACA 57.621 33.333 5.24 5.24 0.00 2.90
3555 9228 9.727859 TTCAATAGCACCTTTTATGTAGTACAA 57.272 29.630 7.16 0.00 0.00 2.41
3556 9229 9.378551 TCAATAGCACCTTTTATGTAGTACAAG 57.621 33.333 7.16 0.00 0.00 3.16
3557 9230 8.612619 CAATAGCACCTTTTATGTAGTACAAGG 58.387 37.037 14.64 14.64 43.14 3.61
3558 9231 6.368779 AGCACCTTTTATGTAGTACAAGGA 57.631 37.500 20.77 2.94 41.02 3.36
3559 9232 6.171213 AGCACCTTTTATGTAGTACAAGGAC 58.829 40.000 20.77 13.68 41.02 3.85
3560 9233 5.935789 GCACCTTTTATGTAGTACAAGGACA 59.064 40.000 20.77 3.27 41.02 4.02
3561 9234 6.128363 GCACCTTTTATGTAGTACAAGGACAC 60.128 42.308 20.77 9.09 41.02 3.67
3562 9235 6.090358 CACCTTTTATGTAGTACAAGGACACG 59.910 42.308 20.77 6.74 41.02 4.49
3563 9236 5.579511 CCTTTTATGTAGTACAAGGACACGG 59.420 44.000 11.83 2.56 41.02 4.94
3564 9237 5.726980 TTTATGTAGTACAAGGACACGGT 57.273 39.130 7.16 0.00 0.00 4.83
3565 9238 6.832520 TTTATGTAGTACAAGGACACGGTA 57.167 37.500 7.16 0.00 0.00 4.02
3566 9239 7.408756 TTTATGTAGTACAAGGACACGGTAT 57.591 36.000 7.16 0.00 0.00 2.73
3567 9240 4.707030 TGTAGTACAAGGACACGGTATG 57.293 45.455 0.00 0.00 0.00 2.39
3568 9241 2.667473 AGTACAAGGACACGGTATGC 57.333 50.000 0.00 0.00 0.00 3.14
3569 9242 1.897133 AGTACAAGGACACGGTATGCA 59.103 47.619 0.00 0.00 0.00 3.96
3570 9243 2.300723 AGTACAAGGACACGGTATGCAA 59.699 45.455 0.00 0.00 0.00 4.08
3571 9244 2.489938 ACAAGGACACGGTATGCAAT 57.510 45.000 0.00 0.00 0.00 3.56
3572 9245 2.790433 ACAAGGACACGGTATGCAATT 58.210 42.857 0.00 0.00 0.00 2.32
3573 9246 2.747446 ACAAGGACACGGTATGCAATTC 59.253 45.455 0.00 0.00 0.00 2.17
3574 9247 1.651987 AGGACACGGTATGCAATTCG 58.348 50.000 0.00 0.00 0.00 3.34
3575 9248 1.206132 AGGACACGGTATGCAATTCGA 59.794 47.619 11.79 0.00 0.00 3.71
3591 9264 3.586100 TTCGATCCAAATCAGACACGA 57.414 42.857 0.00 0.00 31.76 4.35
3658 9331 1.996292 GAGCAACATGTCTACGCTCA 58.004 50.000 23.72 0.00 46.55 4.26
3703 9376 0.517316 CGACCGCTTCCCTTTCTTTG 59.483 55.000 0.00 0.00 0.00 2.77
3708 9381 1.620822 GCTTCCCTTTCTTTGGCTCA 58.379 50.000 0.00 0.00 0.00 4.26
3712 9385 1.494721 TCCCTTTCTTTGGCTCACTGT 59.505 47.619 0.00 0.00 0.00 3.55
3724 9397 1.578206 CTCACTGTCGAGCGTCTCCA 61.578 60.000 0.00 0.00 0.00 3.86
3725 9398 1.170290 TCACTGTCGAGCGTCTCCAA 61.170 55.000 0.00 0.00 0.00 3.53
3726 9399 0.730834 CACTGTCGAGCGTCTCCAAG 60.731 60.000 0.00 0.90 0.00 3.61
3762 9443 1.235696 GAGCCCTCCCTCCATCTCT 59.764 63.158 0.00 0.00 0.00 3.10
3777 9458 2.411628 TCTCTCTTCTCTCTCCCGTG 57.588 55.000 0.00 0.00 0.00 4.94
3789 9470 1.002087 TCTCCCGTGCTTCTTTTCTCC 59.998 52.381 0.00 0.00 0.00 3.71
3800 9481 4.802248 GCTTCTTTTCTCCAAGAGCTCTCA 60.802 45.833 18.55 3.14 34.22 3.27
3807 9489 3.446873 TCTCCAAGAGCTCTCATGTCTTC 59.553 47.826 18.55 0.00 0.00 2.87
3813 9495 6.479660 CCAAGAGCTCTCATGTCTTCTATTTC 59.520 42.308 18.55 0.00 0.00 2.17
3815 9497 6.808829 AGAGCTCTCATGTCTTCTATTTCTG 58.191 40.000 11.45 0.00 0.00 3.02
3817 9499 6.339730 AGCTCTCATGTCTTCTATTTCTGTG 58.660 40.000 0.00 0.00 0.00 3.66
3819 9501 6.035866 GCTCTCATGTCTTCTATTTCTGTGTG 59.964 42.308 0.00 0.00 0.00 3.82
3883 9565 3.060020 GATCCGTCGGCGTCCAGAA 62.060 63.158 9.28 0.00 36.15 3.02
3893 9575 2.214216 CGTCCAGAACCCCTCCACA 61.214 63.158 0.00 0.00 0.00 4.17
3894 9576 1.553690 CGTCCAGAACCCCTCCACAT 61.554 60.000 0.00 0.00 0.00 3.21
3906 9588 1.779092 CCTCCACATCATCCCCATCTT 59.221 52.381 0.00 0.00 0.00 2.40
3909 9591 1.325355 CACATCATCCCCATCTTGCC 58.675 55.000 0.00 0.00 0.00 4.52
3916 9598 0.547471 TCCCCATCTTGCCAGAGACA 60.547 55.000 0.00 0.00 30.36 3.41
3919 9601 1.064906 CCCATCTTGCCAGAGACATGT 60.065 52.381 0.00 0.00 30.36 3.21
3925 9607 2.768253 TGCCAGAGACATGTACCAAG 57.232 50.000 0.00 0.00 0.00 3.61
3937 9619 0.462047 GTACCAAGTCCCATCCAGCG 60.462 60.000 0.00 0.00 0.00 5.18
3938 9620 2.252072 TACCAAGTCCCATCCAGCGC 62.252 60.000 0.00 0.00 0.00 5.92
3991 9673 3.068691 TAGCCCGAGCGCTTCAGT 61.069 61.111 13.26 0.00 46.67 3.41
4039 9722 3.092511 TCCCTGCCATGAGCCCTC 61.093 66.667 0.00 0.00 42.71 4.30
4043 9726 2.611800 TGCCATGAGCCCTCCAGT 60.612 61.111 0.00 0.00 42.71 4.00
4056 9739 0.250553 CTCCAGTACCGGCAAACCAA 60.251 55.000 0.00 0.00 34.57 3.67
4070 9753 2.108362 CCAATAGGTCGACCCCGC 59.892 66.667 30.82 6.17 36.42 6.13
4071 9754 2.108362 CAATAGGTCGACCCCGCC 59.892 66.667 30.82 5.86 36.42 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.195002 CAGTATGGCGCGTGTGGG 61.195 66.667 8.43 0.00 0.00 4.61
11 12 4.169696 TTCGGCGGGCCCAGTATG 62.170 66.667 24.92 5.81 0.00 2.39
17 18 2.676163 ATATGTTCTTCGGCGGGCCC 62.676 60.000 13.57 13.57 0.00 5.80
18 19 1.227853 ATATGTTCTTCGGCGGGCC 60.228 57.895 7.21 0.00 0.00 5.80
19 20 1.557443 CGATATGTTCTTCGGCGGGC 61.557 60.000 7.21 0.00 0.00 6.13
20 21 0.031585 TCGATATGTTCTTCGGCGGG 59.968 55.000 7.21 0.01 36.08 6.13
21 22 1.521423 GTTCGATATGTTCTTCGGCGG 59.479 52.381 7.21 0.00 36.08 6.13
22 23 1.187271 CGTTCGATATGTTCTTCGGCG 59.813 52.381 0.00 0.00 36.08 6.46
23 24 1.071436 GCGTTCGATATGTTCTTCGGC 60.071 52.381 0.00 0.00 36.08 5.54
24 25 1.187271 CGCGTTCGATATGTTCTTCGG 59.813 52.381 0.00 0.00 38.10 4.30
25 26 1.394345 GCGCGTTCGATATGTTCTTCG 60.394 52.381 8.43 0.00 38.10 3.79
26 27 1.071436 GGCGCGTTCGATATGTTCTTC 60.071 52.381 8.43 0.00 38.10 2.87
27 28 0.928229 GGCGCGTTCGATATGTTCTT 59.072 50.000 8.43 0.00 38.10 2.52
28 29 0.874607 GGGCGCGTTCGATATGTTCT 60.875 55.000 8.43 0.00 38.10 3.01
29 30 1.563173 GGGCGCGTTCGATATGTTC 59.437 57.895 8.43 0.00 38.10 3.18
30 31 2.235016 CGGGCGCGTTCGATATGTT 61.235 57.895 15.94 0.00 38.10 2.71
31 32 2.657296 CGGGCGCGTTCGATATGT 60.657 61.111 15.94 0.00 38.10 2.29
32 33 4.059459 GCGGGCGCGTTCGATATG 62.059 66.667 24.70 0.00 38.10 1.78
33 34 4.578898 TGCGGGCGCGTTCGATAT 62.579 61.111 24.70 0.00 45.51 1.63
54 55 4.796231 CTCCACGCCTTCGGTCGG 62.796 72.222 0.00 0.00 40.69 4.79
55 56 2.938539 GATCTCCACGCCTTCGGTCG 62.939 65.000 0.00 0.00 40.69 4.79
56 57 1.227002 GATCTCCACGCCTTCGGTC 60.227 63.158 0.00 0.00 40.69 4.79
57 58 1.541310 TTGATCTCCACGCCTTCGGT 61.541 55.000 0.00 0.00 40.69 4.69
58 59 0.807667 CTTGATCTCCACGCCTTCGG 60.808 60.000 0.00 0.00 40.69 4.30
59 60 0.108615 ACTTGATCTCCACGCCTTCG 60.109 55.000 0.00 0.00 42.43 3.79
60 61 1.205893 AGACTTGATCTCCACGCCTTC 59.794 52.381 0.00 0.00 28.16 3.46
61 62 1.066573 CAGACTTGATCTCCACGCCTT 60.067 52.381 0.00 0.00 34.41 4.35
62 63 0.534412 CAGACTTGATCTCCACGCCT 59.466 55.000 0.00 0.00 34.41 5.52
63 64 0.460987 CCAGACTTGATCTCCACGCC 60.461 60.000 0.00 0.00 34.41 5.68
64 65 1.086634 GCCAGACTTGATCTCCACGC 61.087 60.000 0.00 0.00 34.41 5.34
65 66 0.534412 AGCCAGACTTGATCTCCACG 59.466 55.000 0.00 0.00 34.41 4.94
66 67 2.011046 GCAGCCAGACTTGATCTCCAC 61.011 57.143 0.00 0.00 34.41 4.02
67 68 0.251354 GCAGCCAGACTTGATCTCCA 59.749 55.000 0.00 0.00 34.41 3.86
68 69 0.540923 AGCAGCCAGACTTGATCTCC 59.459 55.000 0.00 0.00 34.41 3.71
69 70 2.167281 TGTAGCAGCCAGACTTGATCTC 59.833 50.000 0.00 0.00 34.41 2.75
70 71 2.168106 CTGTAGCAGCCAGACTTGATCT 59.832 50.000 0.00 0.00 38.66 2.75
71 72 2.548875 CTGTAGCAGCCAGACTTGATC 58.451 52.381 0.00 0.00 31.38 2.92
72 73 2.687700 CTGTAGCAGCCAGACTTGAT 57.312 50.000 0.00 0.00 31.38 2.57
85 86 4.082523 TGGAGGCGGTGCTGTAGC 62.083 66.667 0.00 0.00 42.50 3.58
86 87 2.125512 GTGGAGGCGGTGCTGTAG 60.126 66.667 0.00 0.00 0.00 2.74
87 88 3.702048 GGTGGAGGCGGTGCTGTA 61.702 66.667 0.00 0.00 0.00 2.74
92 93 4.704833 CAGTGGGTGGAGGCGGTG 62.705 72.222 0.00 0.00 0.00 4.94
93 94 4.954118 TCAGTGGGTGGAGGCGGT 62.954 66.667 0.00 0.00 0.00 5.68
94 95 3.636231 TTCAGTGGGTGGAGGCGG 61.636 66.667 0.00 0.00 0.00 6.13
95 96 2.358737 GTTCAGTGGGTGGAGGCG 60.359 66.667 0.00 0.00 0.00 5.52
96 97 2.034221 GGTTCAGTGGGTGGAGGC 59.966 66.667 0.00 0.00 0.00 4.70
97 98 1.073199 GTGGTTCAGTGGGTGGAGG 59.927 63.158 0.00 0.00 0.00 4.30
98 99 0.535102 GTGTGGTTCAGTGGGTGGAG 60.535 60.000 0.00 0.00 0.00 3.86
99 100 1.529796 GTGTGGTTCAGTGGGTGGA 59.470 57.895 0.00 0.00 0.00 4.02
100 101 1.528309 GGTGTGGTTCAGTGGGTGG 60.528 63.158 0.00 0.00 0.00 4.61
101 102 1.101049 GTGGTGTGGTTCAGTGGGTG 61.101 60.000 0.00 0.00 0.00 4.61
102 103 1.226262 GTGGTGTGGTTCAGTGGGT 59.774 57.895 0.00 0.00 0.00 4.51
103 104 0.762418 TAGTGGTGTGGTTCAGTGGG 59.238 55.000 0.00 0.00 0.00 4.61
104 105 1.878102 GCTAGTGGTGTGGTTCAGTGG 60.878 57.143 0.00 0.00 0.00 4.00
105 106 1.202639 TGCTAGTGGTGTGGTTCAGTG 60.203 52.381 0.00 0.00 0.00 3.66
106 107 1.070758 CTGCTAGTGGTGTGGTTCAGT 59.929 52.381 0.00 0.00 0.00 3.41
107 108 1.800805 CTGCTAGTGGTGTGGTTCAG 58.199 55.000 0.00 0.00 0.00 3.02
108 109 0.250295 GCTGCTAGTGGTGTGGTTCA 60.250 55.000 0.00 0.00 0.00 3.18
109 110 0.955919 GGCTGCTAGTGGTGTGGTTC 60.956 60.000 0.00 0.00 0.00 3.62
110 111 1.073199 GGCTGCTAGTGGTGTGGTT 59.927 57.895 0.00 0.00 0.00 3.67
111 112 1.492133 ATGGCTGCTAGTGGTGTGGT 61.492 55.000 0.00 0.00 0.00 4.16
112 113 0.745845 GATGGCTGCTAGTGGTGTGG 60.746 60.000 0.00 0.00 0.00 4.17
113 114 1.086067 CGATGGCTGCTAGTGGTGTG 61.086 60.000 0.00 0.00 0.00 3.82
114 115 1.219124 CGATGGCTGCTAGTGGTGT 59.781 57.895 0.00 0.00 0.00 4.16
115 116 2.176273 GCGATGGCTGCTAGTGGTG 61.176 63.158 0.00 0.00 35.83 4.17
116 117 2.187946 GCGATGGCTGCTAGTGGT 59.812 61.111 0.00 0.00 35.83 4.16
117 118 2.590007 GGCGATGGCTGCTAGTGG 60.590 66.667 0.00 0.00 39.81 4.00
118 119 2.963854 CGGCGATGGCTGCTAGTG 60.964 66.667 0.00 0.00 39.01 2.74
125 126 3.031417 AAGGTTAGCGGCGATGGCT 62.031 57.895 12.98 0.00 44.35 4.75
126 127 2.513897 AAGGTTAGCGGCGATGGC 60.514 61.111 12.98 0.81 38.90 4.40
127 128 2.180204 CCAAGGTTAGCGGCGATGG 61.180 63.158 12.98 0.00 0.00 3.51
128 129 2.823829 GCCAAGGTTAGCGGCGATG 61.824 63.158 12.98 0.00 35.79 3.84
129 130 2.513897 GCCAAGGTTAGCGGCGAT 60.514 61.111 12.98 7.15 35.79 4.58
133 134 3.577334 TTGGGGCCAAGGTTAGCGG 62.577 63.158 4.39 0.00 0.00 5.52
134 135 2.034999 TTGGGGCCAAGGTTAGCG 59.965 61.111 4.39 0.00 0.00 4.26
135 136 4.018409 CTTGGGGCCAAGGTTAGC 57.982 61.111 4.39 0.00 46.88 3.09
145 146 2.991540 GGTGTTCTGGCTTGGGGC 60.992 66.667 0.00 0.00 40.90 5.80
146 147 1.077265 ATGGTGTTCTGGCTTGGGG 59.923 57.895 0.00 0.00 0.00 4.96
147 148 1.252904 CCATGGTGTTCTGGCTTGGG 61.253 60.000 2.57 0.00 0.00 4.12
148 149 1.252904 CCCATGGTGTTCTGGCTTGG 61.253 60.000 11.73 0.00 0.00 3.61
149 150 0.251297 TCCCATGGTGTTCTGGCTTG 60.251 55.000 11.73 0.00 0.00 4.01
150 151 0.251341 GTCCCATGGTGTTCTGGCTT 60.251 55.000 11.73 0.00 0.00 4.35
151 152 1.136329 AGTCCCATGGTGTTCTGGCT 61.136 55.000 11.73 0.00 0.00 4.75
152 153 0.678048 GAGTCCCATGGTGTTCTGGC 60.678 60.000 11.73 0.00 0.00 4.85
153 154 0.692476 TGAGTCCCATGGTGTTCTGG 59.308 55.000 11.73 0.00 0.00 3.86
154 155 1.947678 GCTGAGTCCCATGGTGTTCTG 60.948 57.143 11.73 9.55 0.00 3.02
155 156 0.326264 GCTGAGTCCCATGGTGTTCT 59.674 55.000 11.73 3.00 0.00 3.01
156 157 1.021390 CGCTGAGTCCCATGGTGTTC 61.021 60.000 11.73 5.38 0.00 3.18
157 158 1.003355 CGCTGAGTCCCATGGTGTT 60.003 57.895 11.73 0.00 0.00 3.32
158 159 2.665000 CGCTGAGTCCCATGGTGT 59.335 61.111 11.73 0.00 0.00 4.16
159 160 1.976132 ATCCGCTGAGTCCCATGGTG 61.976 60.000 11.73 2.15 0.00 4.17
160 161 1.274703 AATCCGCTGAGTCCCATGGT 61.275 55.000 11.73 0.00 0.00 3.55
161 162 0.107017 AAATCCGCTGAGTCCCATGG 60.107 55.000 4.14 4.14 0.00 3.66
162 163 1.402968 CAAAATCCGCTGAGTCCCATG 59.597 52.381 0.00 0.00 0.00 3.66
163 164 1.683011 CCAAAATCCGCTGAGTCCCAT 60.683 52.381 0.00 0.00 0.00 4.00
164 165 0.322456 CCAAAATCCGCTGAGTCCCA 60.322 55.000 0.00 0.00 0.00 4.37
165 166 0.035439 TCCAAAATCCGCTGAGTCCC 60.035 55.000 0.00 0.00 0.00 4.46
166 167 2.044123 ATCCAAAATCCGCTGAGTCC 57.956 50.000 0.00 0.00 0.00 3.85
167 168 3.440173 TCAAATCCAAAATCCGCTGAGTC 59.560 43.478 0.00 0.00 0.00 3.36
168 169 3.191371 GTCAAATCCAAAATCCGCTGAGT 59.809 43.478 0.00 0.00 0.00 3.41
169 170 3.191162 TGTCAAATCCAAAATCCGCTGAG 59.809 43.478 0.00 0.00 0.00 3.35
170 171 3.153130 TGTCAAATCCAAAATCCGCTGA 58.847 40.909 0.00 0.00 0.00 4.26
171 172 3.504863 CTGTCAAATCCAAAATCCGCTG 58.495 45.455 0.00 0.00 0.00 5.18
172 173 2.493278 CCTGTCAAATCCAAAATCCGCT 59.507 45.455 0.00 0.00 0.00 5.52
173 174 2.491693 TCCTGTCAAATCCAAAATCCGC 59.508 45.455 0.00 0.00 0.00 5.54
174 175 3.426159 CGTCCTGTCAAATCCAAAATCCG 60.426 47.826 0.00 0.00 0.00 4.18
175 176 3.756434 TCGTCCTGTCAAATCCAAAATCC 59.244 43.478 0.00 0.00 0.00 3.01
176 177 5.181245 TCTTCGTCCTGTCAAATCCAAAATC 59.819 40.000 0.00 0.00 0.00 2.17
177 178 5.070001 TCTTCGTCCTGTCAAATCCAAAAT 58.930 37.500 0.00 0.00 0.00 1.82
178 179 4.456535 TCTTCGTCCTGTCAAATCCAAAA 58.543 39.130 0.00 0.00 0.00 2.44
179 180 4.079980 TCTTCGTCCTGTCAAATCCAAA 57.920 40.909 0.00 0.00 0.00 3.28
180 181 3.762407 TCTTCGTCCTGTCAAATCCAA 57.238 42.857 0.00 0.00 0.00 3.53
181 182 3.599343 CATCTTCGTCCTGTCAAATCCA 58.401 45.455 0.00 0.00 0.00 3.41
182 183 2.939103 CCATCTTCGTCCTGTCAAATCC 59.061 50.000 0.00 0.00 0.00 3.01
183 184 3.861840 TCCATCTTCGTCCTGTCAAATC 58.138 45.455 0.00 0.00 0.00 2.17
184 185 3.981071 TCCATCTTCGTCCTGTCAAAT 57.019 42.857 0.00 0.00 0.00 2.32
185 186 3.981071 ATCCATCTTCGTCCTGTCAAA 57.019 42.857 0.00 0.00 0.00 2.69
186 187 3.676049 CGAATCCATCTTCGTCCTGTCAA 60.676 47.826 0.00 0.00 42.28 3.18
187 188 2.159240 CGAATCCATCTTCGTCCTGTCA 60.159 50.000 0.00 0.00 42.28 3.58
188 189 2.464865 CGAATCCATCTTCGTCCTGTC 58.535 52.381 0.00 0.00 42.28 3.51
189 190 2.586258 CGAATCCATCTTCGTCCTGT 57.414 50.000 0.00 0.00 42.28 4.00
190 191 2.136375 GGCGAATCCATCTTCGTCCTG 61.136 57.143 7.88 0.00 45.09 3.86
191 192 0.105039 GGCGAATCCATCTTCGTCCT 59.895 55.000 7.88 0.00 45.09 3.85
192 193 2.606275 GGCGAATCCATCTTCGTCC 58.394 57.895 7.88 6.14 45.09 4.79
196 197 1.643832 GTGCGGCGAATCCATCTTC 59.356 57.895 12.98 0.00 34.01 2.87
197 198 1.819632 GGTGCGGCGAATCCATCTT 60.820 57.895 12.98 0.00 34.01 2.40
198 199 2.203070 GGTGCGGCGAATCCATCT 60.203 61.111 12.98 0.00 34.01 2.90
199 200 2.513666 TGGTGCGGCGAATCCATC 60.514 61.111 12.98 0.00 34.01 3.51
200 201 2.514592 CTGGTGCGGCGAATCCAT 60.515 61.111 12.98 0.00 34.01 3.41
201 202 2.739849 TTTCTGGTGCGGCGAATCCA 62.740 55.000 12.98 14.24 34.01 3.41
202 203 1.982073 CTTTCTGGTGCGGCGAATCC 61.982 60.000 12.98 9.88 0.00 3.01
203 204 1.425428 CTTTCTGGTGCGGCGAATC 59.575 57.895 12.98 0.00 0.00 2.52
204 205 2.690778 GCTTTCTGGTGCGGCGAAT 61.691 57.895 12.98 0.00 0.00 3.34
205 206 3.353836 GCTTTCTGGTGCGGCGAA 61.354 61.111 12.98 0.00 0.00 4.70
212 213 2.597217 TTGCGGGGCTTTCTGGTG 60.597 61.111 0.00 0.00 0.00 4.17
213 214 2.597510 GTTGCGGGGCTTTCTGGT 60.598 61.111 0.00 0.00 0.00 4.00
214 215 3.373565 GGTTGCGGGGCTTTCTGG 61.374 66.667 0.00 0.00 0.00 3.86
215 216 1.535204 AATGGTTGCGGGGCTTTCTG 61.535 55.000 0.00 0.00 0.00 3.02
216 217 1.228862 AATGGTTGCGGGGCTTTCT 60.229 52.632 0.00 0.00 0.00 2.52
217 218 1.079888 CAATGGTTGCGGGGCTTTC 60.080 57.895 0.00 0.00 0.00 2.62
218 219 1.532794 TCAATGGTTGCGGGGCTTT 60.533 52.632 0.00 0.00 0.00 3.51
219 220 2.117206 TCAATGGTTGCGGGGCTT 59.883 55.556 0.00 0.00 0.00 4.35
220 221 2.676471 GTCAATGGTTGCGGGGCT 60.676 61.111 0.00 0.00 0.00 5.19
242 243 3.070018 CTGTTGTGACTGACCTTCCATC 58.930 50.000 0.00 0.00 0.00 3.51
244 245 2.115427 TCTGTTGTGACTGACCTTCCA 58.885 47.619 0.00 0.00 0.00 3.53
253 254 1.299541 CCTTTGCGTCTGTTGTGACT 58.700 50.000 0.00 0.00 35.00 3.41
266 267 2.092212 TCCTTCATCTCATCCCCTTTGC 60.092 50.000 0.00 0.00 0.00 3.68
270 271 2.021639 TCCTTCCTTCATCTCATCCCCT 60.022 50.000 0.00 0.00 0.00 4.79
275 276 1.765314 CGGGTCCTTCCTTCATCTCAT 59.235 52.381 0.00 0.00 36.25 2.90
276 277 1.195115 CGGGTCCTTCCTTCATCTCA 58.805 55.000 0.00 0.00 36.25 3.27
296 297 3.220658 CGGGGTTTGGCCGTTGTT 61.221 61.111 0.00 0.00 38.44 2.83
338 339 2.362077 GCATCGTGGATATGGCCTTTTT 59.638 45.455 3.32 0.00 0.00 1.94
339 340 1.956477 GCATCGTGGATATGGCCTTTT 59.044 47.619 3.32 0.00 0.00 2.27
344 345 1.862123 CGTGCATCGTGGATATGGC 59.138 57.895 0.00 0.00 34.52 4.40
357 358 1.444119 GAAAACTCCTGGTGCGTGCA 61.444 55.000 0.00 0.00 0.00 4.57
366 367 1.028905 TGTTTGCCCGAAAACTCCTG 58.971 50.000 0.18 0.00 40.11 3.86
376 377 2.276732 ATCTGGGATATGTTTGCCCG 57.723 50.000 0.00 0.00 45.08 6.13
414 415 6.455646 CGAGCATAGTTTGTTTGAGGATACAC 60.456 42.308 0.00 0.00 41.41 2.90
422 423 6.130723 CGTAAAACGAGCATAGTTTGTTTGA 58.869 36.000 5.25 0.00 43.15 2.69
471 472 7.620880 TCAGTATACTAAACATTTGGCACTCT 58.379 34.615 4.74 0.00 0.00 3.24
500 525 5.330455 AGCATCGACTGAGACTTCATTAA 57.670 39.130 0.00 0.00 31.68 1.40
513 538 4.371855 TCTCACGAATTTAGCATCGACT 57.628 40.909 1.84 0.00 41.43 4.18
606 644 5.000012 ACTAAGGCTGTGACTAAATCTCG 58.000 43.478 0.00 0.00 0.00 4.04
693 736 0.819259 GAGGCAAACTGGACAGCACA 60.819 55.000 0.00 0.00 0.00 4.57
697 740 2.839486 TACTGAGGCAAACTGGACAG 57.161 50.000 0.00 0.00 0.00 3.51
709 752 3.005261 CCAACTCGAGATGGATACTGAGG 59.995 52.174 32.01 5.76 40.03 3.86
715 758 4.680708 GCTCAAACCAACTCGAGATGGATA 60.681 45.833 39.08 22.52 40.03 2.59
732 775 0.827507 GGGTTTGGCTCAGGCTCAAA 60.828 55.000 0.00 0.00 36.78 2.69
802 845 3.970410 TCACCTTGCCCAGCCAGG 61.970 66.667 5.22 5.22 45.52 4.45
858 917 4.566987 GTTTATATAGAGGCTCCAACGGG 58.433 47.826 11.71 0.00 0.00 5.28
859 918 4.022589 TCGTTTATATAGAGGCTCCAACGG 60.023 45.833 11.71 2.93 37.09 4.44
890 1357 2.512896 AGGAATGGCTGTGATGAGGAAT 59.487 45.455 0.00 0.00 0.00 3.01
891 1358 1.918262 AGGAATGGCTGTGATGAGGAA 59.082 47.619 0.00 0.00 0.00 3.36
892 1359 1.487976 GAGGAATGGCTGTGATGAGGA 59.512 52.381 0.00 0.00 0.00 3.71
915 1396 3.901844 AGCCCGATTGGATTTAGCTACTA 59.098 43.478 0.00 0.00 37.49 1.82
921 1402 2.408050 CTCGAGCCCGATTGGATTTAG 58.592 52.381 0.00 0.00 44.62 1.85
950 1435 5.234543 GCGAGTGTTTTTCTTCTCTTGTAGT 59.765 40.000 0.00 0.00 0.00 2.73
967 1476 0.663153 GCTTGGAAGTTTGCGAGTGT 59.337 50.000 3.08 0.00 33.05 3.55
986 1495 2.104331 CCATCGTCGTCTTCCCCG 59.896 66.667 0.00 0.00 0.00 5.73
1160 1696 4.812476 CGAAGGGCGCCATGACGA 62.812 66.667 30.85 0.00 34.06 4.20
1237 3014 2.046285 GTGGGGTGCGCATTAGCTT 61.046 57.895 15.91 0.00 39.10 3.74
1242 3019 2.824041 GATCGTGGGGTGCGCATT 60.824 61.111 15.91 0.00 0.00 3.56
1300 3082 4.098044 GGTCACCATCTAAATGAGAGACGA 59.902 45.833 0.00 0.00 37.70 4.20
1301 3083 4.098654 AGGTCACCATCTAAATGAGAGACG 59.901 45.833 0.00 0.00 37.70 4.18
1302 3084 5.606348 AGGTCACCATCTAAATGAGAGAC 57.394 43.478 0.00 0.00 37.70 3.36
1303 3085 5.960811 AGAAGGTCACCATCTAAATGAGAGA 59.039 40.000 0.00 0.00 37.70 3.10
1304 3086 6.232581 AGAAGGTCACCATCTAAATGAGAG 57.767 41.667 0.00 0.00 37.70 3.20
1398 4089 5.607119 ACCGACATGACAAAACTGAATAC 57.393 39.130 0.00 0.00 0.00 1.89
1403 4094 1.194547 CCGACCGACATGACAAAACTG 59.805 52.381 0.00 0.00 0.00 3.16
1404 4095 1.202604 ACCGACCGACATGACAAAACT 60.203 47.619 0.00 0.00 0.00 2.66
1407 4098 0.320073 GGACCGACCGACATGACAAA 60.320 55.000 0.00 0.00 0.00 2.83
1409 4100 1.183030 AAGGACCGACCGACATGACA 61.183 55.000 0.00 0.00 44.74 3.58
1411 4102 0.813184 GTAAGGACCGACCGACATGA 59.187 55.000 0.00 0.00 44.74 3.07
1413 4104 0.962356 ACGTAAGGACCGACCGACAT 60.962 55.000 6.71 0.00 44.74 3.06
1415 4106 1.154150 CACGTAAGGACCGACCGAC 60.154 63.158 6.71 0.00 44.74 4.79
1417 4108 0.171903 ATTCACGTAAGGACCGACCG 59.828 55.000 0.00 0.00 44.74 4.79
1418 4109 1.997606 CAATTCACGTAAGGACCGACC 59.002 52.381 0.00 0.00 46.39 4.79
1419 4110 2.680577 ACAATTCACGTAAGGACCGAC 58.319 47.619 0.00 0.00 46.39 4.79
1421 4112 5.789710 AAATACAATTCACGTAAGGACCG 57.210 39.130 0.00 0.00 46.39 4.79
1423 4114 8.665685 AGATCAAAATACAATTCACGTAAGGAC 58.334 33.333 0.00 0.00 46.39 3.85
1424 4115 8.786826 AGATCAAAATACAATTCACGTAAGGA 57.213 30.769 0.00 0.00 46.39 3.36
1425 4116 9.840427 AAAGATCAAAATACAATTCACGTAAGG 57.160 29.630 0.00 0.00 46.39 2.69
1451 4142 8.925700 GCATGACAATACGTGATTTCTATCATA 58.074 33.333 0.00 0.00 42.49 2.15
1452 4143 7.442062 TGCATGACAATACGTGATTTCTATCAT 59.558 33.333 0.00 0.00 42.49 2.45
1453 4144 6.760770 TGCATGACAATACGTGATTTCTATCA 59.239 34.615 0.00 0.00 38.45 2.15
1454 4145 7.177498 TGCATGACAATACGTGATTTCTATC 57.823 36.000 0.00 0.00 0.00 2.08
1455 4146 7.552458 TTGCATGACAATACGTGATTTCTAT 57.448 32.000 0.00 0.00 31.73 1.98
1456 4147 6.976636 TTGCATGACAATACGTGATTTCTA 57.023 33.333 0.00 0.00 31.73 2.10
1457 4148 5.878332 TTGCATGACAATACGTGATTTCT 57.122 34.783 0.00 0.00 31.73 2.52
1458 4149 6.926280 TTTTGCATGACAATACGTGATTTC 57.074 33.333 0.00 0.00 38.31 2.17
1482 4312 5.838521 TCACAAGAAAAGGGGATAGCTTTTT 59.161 36.000 0.00 0.00 31.44 1.94
1483 4313 5.243954 GTCACAAGAAAAGGGGATAGCTTTT 59.756 40.000 0.00 0.00 33.61 2.27
1490 4329 2.158667 ACACGTCACAAGAAAAGGGGAT 60.159 45.455 0.00 0.00 0.00 3.85
1499 4492 3.496884 GCCTTATTTGACACGTCACAAGA 59.503 43.478 13.19 2.82 39.66 3.02
1505 4498 3.932710 TGATCAGCCTTATTTGACACGTC 59.067 43.478 0.00 0.00 0.00 4.34
1509 4502 4.751600 CGCTATGATCAGCCTTATTTGACA 59.248 41.667 0.09 0.00 38.37 3.58
1520 4521 3.983741 AGTTACTTCCGCTATGATCAGC 58.016 45.455 0.09 0.00 38.23 4.26
1521 4522 5.631512 GCTAAGTTACTTCCGCTATGATCAG 59.368 44.000 0.00 0.00 0.00 2.90
1522 4523 5.302059 AGCTAAGTTACTTCCGCTATGATCA 59.698 40.000 16.52 0.00 31.75 2.92
1525 4526 6.896021 ATAGCTAAGTTACTTCCGCTATGA 57.104 37.500 26.36 13.18 39.50 2.15
1526 4527 6.936222 CATAGCTAAGTTACTTCCGCTATG 57.064 41.667 31.16 31.16 44.43 2.23
1527 4528 6.448006 CACATAGCTAAGTTACTTCCGCTAT 58.552 40.000 23.78 23.78 40.51 2.97
1529 4530 4.441634 CCACATAGCTAAGTTACTTCCGCT 60.442 45.833 20.09 20.09 35.57 5.52
1530 4531 3.802685 CCACATAGCTAAGTTACTTCCGC 59.197 47.826 0.00 6.06 0.00 5.54
1531 4532 3.802685 GCCACATAGCTAAGTTACTTCCG 59.197 47.826 0.00 0.00 0.00 4.30
1532 4533 4.766375 TGCCACATAGCTAAGTTACTTCC 58.234 43.478 0.00 0.00 0.00 3.46
1534 4535 5.745227 ACATGCCACATAGCTAAGTTACTT 58.255 37.500 2.32 2.32 0.00 2.24
1535 4536 5.359194 ACATGCCACATAGCTAAGTTACT 57.641 39.130 0.00 0.00 0.00 2.24
1536 4537 6.201044 CAGTACATGCCACATAGCTAAGTTAC 59.799 42.308 0.00 0.00 0.00 2.50
1537 4538 6.097696 TCAGTACATGCCACATAGCTAAGTTA 59.902 38.462 0.00 0.00 0.00 2.24
1538 4539 5.104941 TCAGTACATGCCACATAGCTAAGTT 60.105 40.000 0.00 0.00 0.00 2.66
1540 4541 4.948847 TCAGTACATGCCACATAGCTAAG 58.051 43.478 0.00 0.00 0.00 2.18
1541 4542 5.351948 TTCAGTACATGCCACATAGCTAA 57.648 39.130 0.00 0.00 0.00 3.09
1543 4544 3.912496 TTCAGTACATGCCACATAGCT 57.088 42.857 0.00 0.00 0.00 3.32
1544 4545 6.483307 TCTTTATTCAGTACATGCCACATAGC 59.517 38.462 0.00 0.00 0.00 2.97
1545 4546 8.437360 TTCTTTATTCAGTACATGCCACATAG 57.563 34.615 0.00 0.00 0.00 2.23
1546 4547 8.800370 TTTCTTTATTCAGTACATGCCACATA 57.200 30.769 0.00 0.00 0.00 2.29
1547 4548 7.611467 TCTTTCTTTATTCAGTACATGCCACAT 59.389 33.333 0.00 0.00 0.00 3.21
1548 4549 6.939730 TCTTTCTTTATTCAGTACATGCCACA 59.060 34.615 0.00 0.00 0.00 4.17
1549 4550 7.377766 TCTTTCTTTATTCAGTACATGCCAC 57.622 36.000 0.00 0.00 0.00 5.01
1550 4551 7.665559 ACTTCTTTCTTTATTCAGTACATGCCA 59.334 33.333 0.00 0.00 0.00 4.92
1551 4552 7.965107 CACTTCTTTCTTTATTCAGTACATGCC 59.035 37.037 0.00 0.00 0.00 4.40
1552 4553 8.507249 ACACTTCTTTCTTTATTCAGTACATGC 58.493 33.333 0.00 0.00 0.00 4.06
1571 4572 9.798994 CCGTATTATGTTACTCTAAACACTTCT 57.201 33.333 0.00 0.00 41.89 2.85
1572 4573 9.578439 ACCGTATTATGTTACTCTAAACACTTC 57.422 33.333 0.00 0.00 41.89 3.01
1588 4589 9.519905 GCGTTATTGTTACAATACCGTATTATG 57.480 33.333 26.81 14.20 0.00 1.90
1589 4590 9.258826 TGCGTTATTGTTACAATACCGTATTAT 57.741 29.630 26.81 2.20 0.00 1.28
1590 4591 8.640091 TGCGTTATTGTTACAATACCGTATTA 57.360 30.769 26.81 14.10 0.00 0.98
1591 4592 7.536895 TGCGTTATTGTTACAATACCGTATT 57.463 32.000 26.81 0.00 0.00 1.89
1592 4593 7.536895 TTGCGTTATTGTTACAATACCGTAT 57.463 32.000 26.81 4.10 0.00 3.06
1593 4594 6.957984 TTGCGTTATTGTTACAATACCGTA 57.042 33.333 26.81 22.63 0.00 4.02
1594 4595 5.859521 TTGCGTTATTGTTACAATACCGT 57.140 34.783 26.81 5.37 0.00 4.83
1595 4596 7.271653 ACATTTTGCGTTATTGTTACAATACCG 59.728 33.333 23.94 23.94 0.00 4.02
1596 4597 8.455598 ACATTTTGCGTTATTGTTACAATACC 57.544 30.769 16.32 9.59 0.00 2.73
1597 4598 8.580431 GGACATTTTGCGTTATTGTTACAATAC 58.420 33.333 16.32 11.02 0.00 1.89
1598 4599 8.297426 TGGACATTTTGCGTTATTGTTACAATA 58.703 29.630 13.14 13.14 0.00 1.90
1599 4600 7.148641 TGGACATTTTGCGTTATTGTTACAAT 58.851 30.769 15.22 15.22 0.00 2.71
1600 4601 6.504398 TGGACATTTTGCGTTATTGTTACAA 58.496 32.000 0.00 0.00 0.00 2.41
1601 4602 6.073327 TGGACATTTTGCGTTATTGTTACA 57.927 33.333 0.00 0.00 0.00 2.41
1602 4603 6.453659 GCATGGACATTTTGCGTTATTGTTAC 60.454 38.462 0.00 0.00 0.00 2.50
1603 4604 5.574830 GCATGGACATTTTGCGTTATTGTTA 59.425 36.000 0.00 0.00 0.00 2.41
1604 4605 4.388469 GCATGGACATTTTGCGTTATTGTT 59.612 37.500 0.00 0.00 0.00 2.83
1605 4606 3.925913 GCATGGACATTTTGCGTTATTGT 59.074 39.130 0.00 0.00 0.00 2.71
1606 4607 3.925299 TGCATGGACATTTTGCGTTATTG 59.075 39.130 0.00 0.00 39.23 1.90
1607 4608 4.185467 TGCATGGACATTTTGCGTTATT 57.815 36.364 0.00 0.00 39.23 1.40
1608 4609 3.865011 TGCATGGACATTTTGCGTTAT 57.135 38.095 0.00 0.00 39.23 1.89
1609 4610 3.509740 CATGCATGGACATTTTGCGTTA 58.490 40.909 19.40 0.00 39.23 3.18
1610 4611 2.339418 CATGCATGGACATTTTGCGTT 58.661 42.857 19.40 0.00 39.23 4.84
1611 4612 1.999048 CATGCATGGACATTTTGCGT 58.001 45.000 19.40 0.00 39.23 5.24
1612 4613 0.648441 GCATGCATGGACATTTTGCG 59.352 50.000 27.34 0.00 39.23 4.85
1613 4614 1.728068 TGCATGCATGGACATTTTGC 58.272 45.000 27.34 12.28 36.91 3.68
1614 4615 3.067833 TGTTGCATGCATGGACATTTTG 58.932 40.909 27.34 0.94 0.00 2.44
1615 4616 3.404224 TGTTGCATGCATGGACATTTT 57.596 38.095 27.34 0.00 0.00 1.82
1616 4617 3.196901 AGATGTTGCATGCATGGACATTT 59.803 39.130 28.29 22.72 0.00 2.32
1617 4618 2.764010 AGATGTTGCATGCATGGACATT 59.236 40.909 28.29 18.69 0.00 2.71
1633 4650 8.271398 TGATGGATCCATGCATATATAGATGT 57.729 34.615 32.05 2.07 39.04 3.06
1646 4669 7.201741 GCAATCTGATATTCTGATGGATCCATG 60.202 40.741 32.05 18.12 35.62 3.66
1716 6044 4.825085 TGGTTCCTGGTTTTCAGTAATCAC 59.175 41.667 0.00 0.00 41.83 3.06
1717 6045 5.055265 TGGTTCCTGGTTTTCAGTAATCA 57.945 39.130 0.00 0.00 41.83 2.57
1718 6046 6.015434 ACAATGGTTCCTGGTTTTCAGTAATC 60.015 38.462 0.00 0.00 41.83 1.75
1719 6047 5.838521 ACAATGGTTCCTGGTTTTCAGTAAT 59.161 36.000 0.00 0.00 41.83 1.89
1721 6049 4.798882 ACAATGGTTCCTGGTTTTCAGTA 58.201 39.130 0.00 0.00 41.83 2.74
1722 6050 3.636764 GACAATGGTTCCTGGTTTTCAGT 59.363 43.478 0.00 0.00 41.83 3.41
1723 6051 3.636300 TGACAATGGTTCCTGGTTTTCAG 59.364 43.478 0.00 0.00 43.00 3.02
1724 6052 3.383185 GTGACAATGGTTCCTGGTTTTCA 59.617 43.478 0.00 0.00 0.00 2.69
1753 6081 3.558674 GTGGAACTGAGGATGGTGG 57.441 57.895 0.00 0.00 0.00 4.61
1778 6263 6.256975 CAGGTATAAACGTCGAAATGATCCAA 59.743 38.462 0.00 0.00 0.00 3.53
1782 7142 5.909477 TCCAGGTATAAACGTCGAAATGAT 58.091 37.500 0.00 0.00 0.00 2.45
1865 7243 4.922692 CACATGCATTTCACGTAATTTGGT 59.077 37.500 0.00 0.00 0.00 3.67
1957 7335 2.501607 TAATCAACCGCAACGCACGC 62.502 55.000 0.00 0.00 0.00 5.34
2034 7423 4.389992 CACATGTCAGTAACAGGCTAACAG 59.610 45.833 0.00 0.00 43.45 3.16
2035 7424 4.314961 CACATGTCAGTAACAGGCTAACA 58.685 43.478 0.00 0.00 43.45 2.41
2036 7425 3.684788 CCACATGTCAGTAACAGGCTAAC 59.315 47.826 0.00 0.00 43.45 2.34
2037 7426 3.326588 ACCACATGTCAGTAACAGGCTAA 59.673 43.478 0.00 0.00 43.45 3.09
2038 7427 2.903784 ACCACATGTCAGTAACAGGCTA 59.096 45.455 0.00 0.00 43.45 3.93
2039 7428 1.699634 ACCACATGTCAGTAACAGGCT 59.300 47.619 0.00 0.00 43.45 4.58
2040 7429 2.185004 ACCACATGTCAGTAACAGGC 57.815 50.000 0.00 0.00 43.45 4.85
2041 7430 3.882888 ACAAACCACATGTCAGTAACAGG 59.117 43.478 0.00 0.00 45.14 4.00
2077 7483 2.595463 GTCAAGCACAGGCCTGCA 60.595 61.111 33.06 6.84 42.56 4.41
2556 7974 3.383229 TCGAAGCCGATGACCCAA 58.617 55.556 0.00 0.00 40.30 4.12
2658 8076 4.309950 GTGACGAACACCGGGCCT 62.310 66.667 6.32 0.00 43.05 5.19
2724 8142 6.405731 CGAGAGTGATCTCCTCTTTCAGAATT 60.406 42.308 14.23 0.00 39.36 2.17
2730 8148 3.283751 TCCGAGAGTGATCTCCTCTTTC 58.716 50.000 14.23 5.15 39.36 2.62
2873 8383 3.034635 GCCCCAGATGAGAAAGTAGAGA 58.965 50.000 0.00 0.00 0.00 3.10
3076 8616 5.762218 TGTCGATCCCTTAACTAGTAGCTAC 59.238 44.000 16.43 16.43 0.00 3.58
3079 8619 4.023021 CCTGTCGATCCCTTAACTAGTAGC 60.023 50.000 0.00 0.00 0.00 3.58
3080 8620 5.374921 TCCTGTCGATCCCTTAACTAGTAG 58.625 45.833 0.00 0.00 0.00 2.57
3081 8621 5.104193 ACTCCTGTCGATCCCTTAACTAGTA 60.104 44.000 0.00 0.00 0.00 1.82
3082 8622 4.208746 CTCCTGTCGATCCCTTAACTAGT 58.791 47.826 0.00 0.00 0.00 2.57
3085 8625 3.103080 ACTCCTGTCGATCCCTTAACT 57.897 47.619 0.00 0.00 0.00 2.24
3086 8626 3.243468 GCTACTCCTGTCGATCCCTTAAC 60.243 52.174 0.00 0.00 0.00 2.01
3087 8627 2.957006 GCTACTCCTGTCGATCCCTTAA 59.043 50.000 0.00 0.00 0.00 1.85
3089 8629 1.404843 GCTACTCCTGTCGATCCCTT 58.595 55.000 0.00 0.00 0.00 3.95
3090 8630 0.820074 CGCTACTCCTGTCGATCCCT 60.820 60.000 0.00 0.00 0.00 4.20
3091 8631 0.818445 TCGCTACTCCTGTCGATCCC 60.818 60.000 0.00 0.00 0.00 3.85
3092 8632 0.589223 CTCGCTACTCCTGTCGATCC 59.411 60.000 0.00 0.00 0.00 3.36
3121 8746 1.268899 GGACGATGGTGGACGTATAGG 59.731 57.143 0.00 0.00 42.74 2.57
3150 8776 3.628257 CCAGGGGAAAAAGGCAGACATAT 60.628 47.826 0.00 0.00 0.00 1.78
3173 8809 3.044894 TCCATGGACCATGCACTACATA 58.955 45.455 26.56 3.56 40.20 2.29
3192 8828 4.251268 TCATCTTCATGCATGATCGATCC 58.749 43.478 29.13 8.00 36.56 3.36
3278 8944 2.003301 TCACTCGATCTCACTGTCTCG 58.997 52.381 0.00 0.00 0.00 4.04
3535 9208 6.171213 GTCCTTGTACTACATAAAAGGTGCT 58.829 40.000 5.96 0.00 45.62 4.40
3550 9223 2.373540 TGCATACCGTGTCCTTGTAC 57.626 50.000 0.00 0.00 0.00 2.90
3551 9224 3.620427 ATTGCATACCGTGTCCTTGTA 57.380 42.857 0.00 0.00 0.00 2.41
3552 9225 2.489938 ATTGCATACCGTGTCCTTGT 57.510 45.000 0.00 0.00 0.00 3.16
3553 9226 2.223021 CGAATTGCATACCGTGTCCTTG 60.223 50.000 0.00 0.00 0.00 3.61
3554 9227 2.006888 CGAATTGCATACCGTGTCCTT 58.993 47.619 0.00 0.00 0.00 3.36
3555 9228 1.206132 TCGAATTGCATACCGTGTCCT 59.794 47.619 0.00 0.00 0.00 3.85
3556 9229 1.647346 TCGAATTGCATACCGTGTCC 58.353 50.000 0.00 0.00 0.00 4.02
3557 9230 2.221055 GGATCGAATTGCATACCGTGTC 59.779 50.000 0.00 0.00 0.00 3.67
3558 9231 2.210116 GGATCGAATTGCATACCGTGT 58.790 47.619 0.00 0.00 0.00 4.49
3559 9232 2.209273 TGGATCGAATTGCATACCGTG 58.791 47.619 0.00 0.00 0.00 4.94
3560 9233 2.613026 TGGATCGAATTGCATACCGT 57.387 45.000 0.00 0.00 0.00 4.83
3561 9234 3.961477 TTTGGATCGAATTGCATACCG 57.039 42.857 0.00 0.00 0.00 4.02
3562 9235 5.239306 TCTGATTTGGATCGAATTGCATACC 59.761 40.000 0.00 0.00 34.91 2.73
3563 9236 6.138761 GTCTGATTTGGATCGAATTGCATAC 58.861 40.000 0.00 0.00 34.91 2.39
3564 9237 5.821995 TGTCTGATTTGGATCGAATTGCATA 59.178 36.000 0.00 0.00 34.91 3.14
3565 9238 4.641541 TGTCTGATTTGGATCGAATTGCAT 59.358 37.500 0.00 0.00 34.91 3.96
3566 9239 4.009002 TGTCTGATTTGGATCGAATTGCA 58.991 39.130 0.00 0.00 34.91 4.08
3567 9240 4.346129 GTGTCTGATTTGGATCGAATTGC 58.654 43.478 0.00 0.00 34.91 3.56
3568 9241 4.329801 TCGTGTCTGATTTGGATCGAATTG 59.670 41.667 0.00 0.00 34.91 2.32
3569 9242 4.503910 TCGTGTCTGATTTGGATCGAATT 58.496 39.130 0.00 0.00 34.91 2.17
3570 9243 4.115516 CTCGTGTCTGATTTGGATCGAAT 58.884 43.478 0.00 0.00 34.91 3.34
3571 9244 3.056821 ACTCGTGTCTGATTTGGATCGAA 60.057 43.478 0.00 0.00 34.91 3.71
3572 9245 2.492088 ACTCGTGTCTGATTTGGATCGA 59.508 45.455 0.00 0.00 34.91 3.59
3573 9246 2.854777 GACTCGTGTCTGATTTGGATCG 59.145 50.000 10.29 0.00 39.94 3.69
3574 9247 2.854777 CGACTCGTGTCTGATTTGGATC 59.145 50.000 15.02 0.00 40.86 3.36
3575 9248 2.492088 TCGACTCGTGTCTGATTTGGAT 59.508 45.455 15.02 0.00 40.86 3.41
3637 9310 2.680312 AGCGTAGACATGTTGCTCAT 57.320 45.000 0.00 0.00 37.22 2.90
3651 9324 1.080772 CCTGCGAAGTGTGAGCGTA 60.081 57.895 0.00 0.00 0.00 4.42
3658 9331 1.071471 CCTGGTTCCTGCGAAGTGT 59.929 57.895 0.00 0.00 0.00 3.55
3688 9361 0.523519 GAGCCAAAGAAAGGGAAGCG 59.476 55.000 0.00 0.00 0.00 4.68
3708 9381 1.581954 CTTGGAGACGCTCGACAGT 59.418 57.895 0.00 0.00 0.00 3.55
3712 9385 1.080501 CTTGCTTGGAGACGCTCGA 60.081 57.895 0.00 0.00 0.00 4.04
3738 9411 3.462678 GAGGGAGGGCTCACCGAC 61.463 72.222 0.00 0.00 46.96 4.79
3739 9412 4.779733 GGAGGGAGGGCTCACCGA 62.780 72.222 0.00 0.00 46.96 4.69
3762 9443 1.178276 GAAGCACGGGAGAGAGAAGA 58.822 55.000 0.00 0.00 0.00 2.87
3777 9458 3.673902 AGAGCTCTTGGAGAAAAGAAGC 58.326 45.455 11.45 0.00 35.79 3.86
3789 9470 7.223193 CAGAAATAGAAGACATGAGAGCTCTTG 59.777 40.741 19.36 15.67 39.69 3.02
3800 9481 6.438741 TCTCTCCACACAGAAATAGAAGACAT 59.561 38.462 0.00 0.00 0.00 3.06
3807 9489 3.775202 CCGTCTCTCCACACAGAAATAG 58.225 50.000 0.00 0.00 0.00 1.73
3813 9495 1.892819 ATGGCCGTCTCTCCACACAG 61.893 60.000 0.00 0.00 34.81 3.66
3815 9497 1.448540 CATGGCCGTCTCTCCACAC 60.449 63.158 0.00 0.00 34.81 3.82
3817 9499 2.187946 CCATGGCCGTCTCTCCAC 59.812 66.667 0.00 0.00 34.81 4.02
3867 9549 4.047059 GTTCTGGACGCCGACGGA 62.047 66.667 20.50 0.00 46.04 4.69
3883 9565 1.697754 GGGGATGATGTGGAGGGGT 60.698 63.158 0.00 0.00 0.00 4.95
3893 9575 1.424302 CTCTGGCAAGATGGGGATGAT 59.576 52.381 0.00 0.00 0.00 2.45
3894 9576 0.841961 CTCTGGCAAGATGGGGATGA 59.158 55.000 0.00 0.00 0.00 2.92
3906 9588 1.977854 ACTTGGTACATGTCTCTGGCA 59.022 47.619 0.00 0.00 43.42 4.92
3916 9598 1.212935 GCTGGATGGGACTTGGTACAT 59.787 52.381 0.00 0.00 39.30 2.29
3919 9601 1.904771 CGCTGGATGGGACTTGGTA 59.095 57.895 0.00 0.00 0.00 3.25
3959 9641 4.393155 CTACAGCACTGCGGGGCA 62.393 66.667 24.49 0.00 36.92 5.36
3970 9652 4.821589 AAGCGCTCGGGCTACAGC 62.822 66.667 12.06 0.00 43.93 4.40
3974 9656 3.064987 GACTGAAGCGCTCGGGCTA 62.065 63.158 12.06 0.00 43.93 3.93
4002 9684 2.015227 GCTCCTCTCCTCTGCTTCGG 62.015 65.000 0.00 0.00 0.00 4.30
4031 9713 2.363795 CCGGTACTGGAGGGCTCA 60.364 66.667 16.40 0.00 0.00 4.26
4039 9722 2.014128 CTATTGGTTTGCCGGTACTGG 58.986 52.381 17.09 17.09 37.67 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.