Multiple sequence alignment - TraesCS6A01G326600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G326600 chr6A 100.000 3014 0 0 1 3014 560105809 560102796 0.000000e+00 5566.0
1 TraesCS6A01G326600 chr6A 92.276 971 75 0 1035 2005 560568167 560569137 0.000000e+00 1378.0
2 TraesCS6A01G326600 chr6D 94.780 1207 56 1 1035 2234 417694766 417693560 0.000000e+00 1873.0
3 TraesCS6A01G326600 chr6D 91.567 1091 77 6 1035 2110 417891247 417892337 0.000000e+00 1491.0
4 TraesCS6A01G326600 chr6D 90.194 1030 61 15 1 993 108454373 108453347 0.000000e+00 1306.0
5 TraesCS6A01G326600 chr6D 93.909 591 35 1 1 590 451666982 451666392 0.000000e+00 891.0
6 TraesCS6A01G326600 chr6D 93.682 459 27 2 2278 2735 417893133 417893590 0.000000e+00 686.0
7 TraesCS6A01G326600 chr6D 89.286 336 25 3 2680 3014 417693519 417693194 7.780000e-111 411.0
8 TraesCS6A01G326600 chr6D 90.129 233 13 3 2785 3014 417893592 417893817 8.170000e-76 294.0
9 TraesCS6A01G326600 chr6D 94.231 52 2 1 2230 2281 417893064 417893114 8.960000e-11 78.7
10 TraesCS6A01G326600 chr6B 91.182 1066 87 4 1035 2094 626590113 626589049 0.000000e+00 1441.0
11 TraesCS6A01G326600 chr6B 90.918 1046 78 9 1035 2064 626812392 626813436 0.000000e+00 1389.0
12 TraesCS6A01G326600 chr6B 91.864 971 79 0 1035 2005 626457613 626456643 0.000000e+00 1356.0
13 TraesCS6A01G326600 chr6B 91.246 971 85 0 1035 2005 626882984 626883954 0.000000e+00 1323.0
14 TraesCS6A01G326600 chr6B 89.645 338 20 9 2680 3014 626456390 626456065 1.670000e-112 416.0
15 TraesCS6A01G326600 chr6B 94.245 139 8 0 2739 2877 626588959 626588821 2.350000e-51 213.0
16 TraesCS6A01G326600 chr3A 91.325 1049 45 11 1 1007 509546401 509547445 0.000000e+00 1391.0
17 TraesCS6A01G326600 chr3A 83.874 1079 94 29 1 1007 1907927 1906857 0.000000e+00 955.0
18 TraesCS6A01G326600 chr3A 89.679 436 26 10 586 1003 640375622 640375188 3.420000e-149 538.0
19 TraesCS6A01G326600 chr3A 89.786 421 30 3 586 993 697393358 697392938 7.400000e-146 527.0
20 TraesCS6A01G326600 chr3A 85.930 398 28 12 631 1007 688121052 688120662 1.680000e-107 399.0
21 TraesCS6A01G326600 chr2D 90.564 1028 54 15 9 993 86519600 86520627 0.000000e+00 1321.0
22 TraesCS6A01G326600 chr5A 90.127 1023 62 13 9 993 680714687 680715708 0.000000e+00 1293.0
23 TraesCS6A01G326600 chr5A 88.528 985 62 8 1 934 356445428 356444444 0.000000e+00 1146.0
24 TraesCS6A01G326600 chr5A 92.371 603 46 0 1 603 566143640 566143038 0.000000e+00 859.0
25 TraesCS6A01G326600 chr1D 91.079 964 55 8 1 934 66765923 66766885 0.000000e+00 1275.0
26 TraesCS6A01G326600 chr2A 90.389 978 49 14 1 934 104030379 104029403 0.000000e+00 1243.0
27 TraesCS6A01G326600 chr2A 88.623 1046 47 8 1 1007 136968407 136969419 0.000000e+00 1206.0
28 TraesCS6A01G326600 chr2A 92.715 604 44 0 1 604 758116347 758115744 0.000000e+00 872.0
29 TraesCS6A01G326600 chr2A 92.462 597 44 1 1 597 703351868 703352463 0.000000e+00 852.0
30 TraesCS6A01G326600 chr7A 89.489 999 55 12 42 993 628014186 628015181 0.000000e+00 1218.0
31 TraesCS6A01G326600 chr7D 87.475 1006 97 16 1 990 603806975 603807967 0.000000e+00 1133.0
32 TraesCS6A01G326600 chr3D 94.527 603 33 0 1 603 80219063 80218461 0.000000e+00 931.0
33 TraesCS6A01G326600 chr5D 94.881 586 30 0 1 586 374628160 374628745 0.000000e+00 917.0
34 TraesCS6A01G326600 chr1A 94.167 600 32 2 1 597 7646602 7647201 0.000000e+00 911.0
35 TraesCS6A01G326600 chr4D 93.802 597 37 0 1 597 93440447 93441043 0.000000e+00 898.0
36 TraesCS6A01G326600 chr5B 100.000 29 0 0 1011 1039 450456901 450456929 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G326600 chr6A 560102796 560105809 3013 True 5566.000 5566 100.00000 1 3014 1 chr6A.!!$R1 3013
1 TraesCS6A01G326600 chr6A 560568167 560569137 970 False 1378.000 1378 92.27600 1035 2005 1 chr6A.!!$F1 970
2 TraesCS6A01G326600 chr6D 108453347 108454373 1026 True 1306.000 1306 90.19400 1 993 1 chr6D.!!$R1 992
3 TraesCS6A01G326600 chr6D 417693194 417694766 1572 True 1142.000 1873 92.03300 1035 3014 2 chr6D.!!$R3 1979
4 TraesCS6A01G326600 chr6D 451666392 451666982 590 True 891.000 891 93.90900 1 590 1 chr6D.!!$R2 589
5 TraesCS6A01G326600 chr6D 417891247 417893817 2570 False 637.425 1491 92.40225 1035 3014 4 chr6D.!!$F1 1979
6 TraesCS6A01G326600 chr6B 626812392 626813436 1044 False 1389.000 1389 90.91800 1035 2064 1 chr6B.!!$F1 1029
7 TraesCS6A01G326600 chr6B 626882984 626883954 970 False 1323.000 1323 91.24600 1035 2005 1 chr6B.!!$F2 970
8 TraesCS6A01G326600 chr6B 626456065 626457613 1548 True 886.000 1356 90.75450 1035 3014 2 chr6B.!!$R1 1979
9 TraesCS6A01G326600 chr6B 626588821 626590113 1292 True 827.000 1441 92.71350 1035 2877 2 chr6B.!!$R2 1842
10 TraesCS6A01G326600 chr3A 509546401 509547445 1044 False 1391.000 1391 91.32500 1 1007 1 chr3A.!!$F1 1006
11 TraesCS6A01G326600 chr3A 1906857 1907927 1070 True 955.000 955 83.87400 1 1007 1 chr3A.!!$R1 1006
12 TraesCS6A01G326600 chr2D 86519600 86520627 1027 False 1321.000 1321 90.56400 9 993 1 chr2D.!!$F1 984
13 TraesCS6A01G326600 chr5A 680714687 680715708 1021 False 1293.000 1293 90.12700 9 993 1 chr5A.!!$F1 984
14 TraesCS6A01G326600 chr5A 356444444 356445428 984 True 1146.000 1146 88.52800 1 934 1 chr5A.!!$R1 933
15 TraesCS6A01G326600 chr5A 566143038 566143640 602 True 859.000 859 92.37100 1 603 1 chr5A.!!$R2 602
16 TraesCS6A01G326600 chr1D 66765923 66766885 962 False 1275.000 1275 91.07900 1 934 1 chr1D.!!$F1 933
17 TraesCS6A01G326600 chr2A 104029403 104030379 976 True 1243.000 1243 90.38900 1 934 1 chr2A.!!$R1 933
18 TraesCS6A01G326600 chr2A 136968407 136969419 1012 False 1206.000 1206 88.62300 1 1007 1 chr2A.!!$F1 1006
19 TraesCS6A01G326600 chr2A 758115744 758116347 603 True 872.000 872 92.71500 1 604 1 chr2A.!!$R2 603
20 TraesCS6A01G326600 chr2A 703351868 703352463 595 False 852.000 852 92.46200 1 597 1 chr2A.!!$F2 596
21 TraesCS6A01G326600 chr7A 628014186 628015181 995 False 1218.000 1218 89.48900 42 993 1 chr7A.!!$F1 951
22 TraesCS6A01G326600 chr7D 603806975 603807967 992 False 1133.000 1133 87.47500 1 990 1 chr7D.!!$F1 989
23 TraesCS6A01G326600 chr3D 80218461 80219063 602 True 931.000 931 94.52700 1 603 1 chr3D.!!$R1 602
24 TraesCS6A01G326600 chr5D 374628160 374628745 585 False 917.000 917 94.88100 1 586 1 chr5D.!!$F1 585
25 TraesCS6A01G326600 chr1A 7646602 7647201 599 False 911.000 911 94.16700 1 597 1 chr1A.!!$F1 596
26 TraesCS6A01G326600 chr4D 93440447 93441043 596 False 898.000 898 93.80200 1 597 1 chr4D.!!$F1 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 1005 0.670546 CAACACCGTCGGAGCTTCAT 60.671 55.0 20.51 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2435 2883 0.03467 ACCAAGAGGAGCAAGGATGC 60.035 55.0 0.0 0.0 45.46 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 1.098869 TTGAGCAACAAACGGAAGCA 58.901 45.000 0.00 0.00 35.39 3.91
106 116 8.812513 AACAATTAAGTTGGATGATGATGAGA 57.187 30.769 0.00 0.00 42.28 3.27
181 191 3.826729 GGGTTCATACTCAAAGCCAAAGT 59.173 43.478 0.00 0.00 41.58 2.66
230 240 5.291905 ACCGAAAAGAAGAAGAGGAAAGA 57.708 39.130 0.00 0.00 0.00 2.52
254 264 6.374565 AGATGATGAGCTCAAAAATGCTAC 57.625 37.500 22.50 5.76 39.91 3.58
284 294 5.859205 ATTGTGAAGGCAAGAAAAGAAGT 57.141 34.783 0.00 0.00 0.00 3.01
607 833 2.574018 GGTGGCTTGGGTGGCTTTC 61.574 63.158 0.00 0.00 0.00 2.62
642 868 1.511613 CTATGGTCACCATGGGAGGT 58.488 55.000 20.57 0.00 44.84 3.85
656 882 4.112634 TGGGAGGTATGAGTTTTGCTTT 57.887 40.909 0.00 0.00 0.00 3.51
658 884 4.898861 TGGGAGGTATGAGTTTTGCTTTTT 59.101 37.500 0.00 0.00 0.00 1.94
736 963 1.138859 CTCCTCGCACACATTCCCATA 59.861 52.381 0.00 0.00 0.00 2.74
778 1005 0.670546 CAACACCGTCGGAGCTTCAT 60.671 55.000 20.51 0.00 0.00 2.57
911 1169 7.548427 TGAACTTGATTTGCATTTTGAACTTGA 59.452 29.630 0.00 0.00 0.00 3.02
921 1179 7.162761 TGCATTTTGAACTTGATTGGATGAAT 58.837 30.769 0.00 0.00 0.00 2.57
1008 1267 9.934190 AATTTTATTGTGTTGAAAATGTTCAGC 57.066 25.926 5.56 5.56 44.49 4.26
1009 1268 6.746104 TTATTGTGTTGAAAATGTTCAGCG 57.254 33.333 7.83 0.00 45.25 5.18
1010 1269 3.077229 TGTGTTGAAAATGTTCAGCGG 57.923 42.857 7.83 0.00 45.25 5.52
1011 1270 1.786579 GTGTTGAAAATGTTCAGCGGC 59.213 47.619 7.83 0.00 45.25 6.53
1012 1271 1.052287 GTTGAAAATGTTCAGCGGCG 58.948 50.000 0.51 0.51 44.49 6.46
1013 1272 0.662970 TTGAAAATGTTCAGCGGCGC 60.663 50.000 26.86 26.86 44.49 6.53
1014 1273 2.126888 AAAATGTTCAGCGGCGCG 60.127 55.556 27.59 20.84 0.00 6.86
1025 1284 4.514569 CGGCGCGCGCTGTATTTT 62.515 61.111 46.00 0.00 42.19 1.82
1027 1286 4.173659 GCGCGCGCTGTATTTTAG 57.826 55.556 44.38 11.16 38.26 1.85
1028 1287 1.998772 GCGCGCGCTGTATTTTAGC 60.999 57.895 44.38 17.67 38.26 3.09
1035 1294 2.353257 GCTGTATTTTAGCGCGTCTG 57.647 50.000 8.43 0.00 0.00 3.51
1036 1295 1.592350 GCTGTATTTTAGCGCGTCTGC 60.592 52.381 8.43 0.00 37.91 4.26
1137 1396 1.832608 CCATGCCATGCTGCTGGAT 60.833 57.895 18.30 4.42 38.69 3.41
1144 1403 3.333899 ATGCTGCTGGATGGCGTCA 62.334 57.895 9.27 0.00 34.52 4.35
1145 1404 2.515523 GCTGCTGGATGGCGTCAT 60.516 61.111 0.00 0.00 36.09 3.06
1174 1433 4.435436 TCACGCTGGTAGCTGCCG 62.435 66.667 16.65 11.82 39.60 5.69
1231 1490 1.769716 TATGTGGGTGCACCGGTTCA 61.770 55.000 29.08 22.66 44.64 3.18
1281 1540 1.709147 GCATCGCCAACTCGCTGATT 61.709 55.000 0.00 0.00 0.00 2.57
1293 1552 2.212652 TCGCTGATTGACATGTATGCC 58.787 47.619 0.00 0.00 0.00 4.40
1340 1599 0.950836 CAGGTGTTTGACGGCATGAA 59.049 50.000 0.00 0.00 0.00 2.57
1434 1693 3.422122 GCATTTTGAGGCAATGCGA 57.578 47.368 0.00 0.00 45.24 5.10
1437 1696 2.671914 GCATTTTGAGGCAATGCGAAGA 60.672 45.455 0.00 0.00 45.24 2.87
1556 1821 1.377202 GGGAAGAGCACGGCATCAA 60.377 57.895 0.00 0.00 0.00 2.57
1572 1837 2.519771 TCAAAGCAAGGATGGAGCAT 57.480 45.000 0.00 0.00 0.00 3.79
1824 2089 3.355344 AAATGGGATGGGGCCGGT 61.355 61.111 1.90 0.00 0.00 5.28
1920 2185 1.154150 GCATGAGTTTGTCTGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
1921 2186 1.503542 CATGAGTTTGTCTGCGGCC 59.496 57.895 0.00 0.00 0.00 6.13
2094 2386 1.523154 TTTGCTTGCCCATCCACGAC 61.523 55.000 0.00 0.00 0.00 4.34
2155 2553 3.187637 TGTTGTATTTGCAGTTCTACGGC 59.812 43.478 0.00 0.00 39.77 5.68
2160 2558 2.772077 TTGCAGTTCTACGGCCATTA 57.228 45.000 2.24 0.00 38.55 1.90
2169 2567 0.677288 TACGGCCATTATGACTCCCG 59.323 55.000 2.24 10.29 41.31 5.14
2185 2584 3.057033 ACTCCCGTTACATGTACAGTGTC 60.057 47.826 4.68 0.00 0.00 3.67
2234 2682 2.744202 GCCAGTAACACAGGTGATGAAG 59.256 50.000 6.40 0.00 0.00 3.02
2235 2683 2.744202 CCAGTAACACAGGTGATGAAGC 59.256 50.000 6.40 0.00 0.00 3.86
2239 2687 0.392706 ACACAGGTGATGAAGCGACA 59.607 50.000 6.40 0.00 0.00 4.35
2240 2688 0.792640 CACAGGTGATGAAGCGACAC 59.207 55.000 0.00 0.00 0.00 3.67
2244 2692 3.514777 GTGATGAAGCGACACCAGA 57.485 52.632 0.00 0.00 0.00 3.86
2246 2694 2.143122 GTGATGAAGCGACACCAGAAA 58.857 47.619 0.00 0.00 0.00 2.52
2247 2695 2.548057 GTGATGAAGCGACACCAGAAAA 59.452 45.455 0.00 0.00 0.00 2.29
2248 2696 2.807967 TGATGAAGCGACACCAGAAAAG 59.192 45.455 0.00 0.00 0.00 2.27
2249 2697 1.593196 TGAAGCGACACCAGAAAAGG 58.407 50.000 0.00 0.00 0.00 3.11
2251 2699 1.531578 GAAGCGACACCAGAAAAGGAC 59.468 52.381 0.00 0.00 0.00 3.85
2252 2700 0.759346 AGCGACACCAGAAAAGGACT 59.241 50.000 0.00 0.00 0.00 3.85
2254 2702 1.419374 CGACACCAGAAAAGGACTCG 58.581 55.000 0.00 0.00 0.00 4.18
2255 2703 1.149148 GACACCAGAAAAGGACTCGC 58.851 55.000 0.00 0.00 0.00 5.03
2258 2706 1.734465 CACCAGAAAAGGACTCGCATC 59.266 52.381 0.00 0.00 0.00 3.91
2260 2708 1.373570 CAGAAAAGGACTCGCATCCC 58.626 55.000 1.48 0.00 39.91 3.85
2261 2709 0.253327 AGAAAAGGACTCGCATCCCC 59.747 55.000 1.48 0.00 39.91 4.81
2262 2710 1.078426 AAAAGGACTCGCATCCCCG 60.078 57.895 1.48 0.00 39.91 5.73
2265 2713 4.530857 GGACTCGCATCCCCGGTG 62.531 72.222 0.00 0.00 31.94 4.94
2270 2718 4.910585 CGCATCCCCGGTGCCTAC 62.911 72.222 9.71 0.00 39.39 3.18
2271 2719 3.480133 GCATCCCCGGTGCCTACT 61.480 66.667 4.20 0.00 36.61 2.57
2272 2720 2.822399 CATCCCCGGTGCCTACTC 59.178 66.667 0.00 0.00 0.00 2.59
2274 2722 1.762460 ATCCCCGGTGCCTACTCTG 60.762 63.158 0.00 0.00 0.00 3.35
2275 2723 2.531483 ATCCCCGGTGCCTACTCTGT 62.531 60.000 0.00 0.00 0.00 3.41
2276 2724 2.291043 CCCCGGTGCCTACTCTGTT 61.291 63.158 0.00 0.00 0.00 3.16
2277 2725 0.974010 CCCCGGTGCCTACTCTGTTA 60.974 60.000 0.00 0.00 0.00 2.41
2278 2726 0.175073 CCCGGTGCCTACTCTGTTAC 59.825 60.000 0.00 0.00 0.00 2.50
2279 2727 0.175073 CCGGTGCCTACTCTGTTACC 59.825 60.000 0.00 0.00 0.00 2.85
2280 2728 0.892755 CGGTGCCTACTCTGTTACCA 59.107 55.000 0.00 0.00 0.00 3.25
2281 2729 1.403780 CGGTGCCTACTCTGTTACCAC 60.404 57.143 0.00 0.00 0.00 4.16
2282 2730 1.066358 GGTGCCTACTCTGTTACCACC 60.066 57.143 0.00 0.00 35.10 4.61
2283 2731 1.621814 GTGCCTACTCTGTTACCACCA 59.378 52.381 0.00 0.00 0.00 4.17
2284 2732 2.236395 GTGCCTACTCTGTTACCACCAT 59.764 50.000 0.00 0.00 0.00 3.55
2285 2733 2.500098 TGCCTACTCTGTTACCACCATC 59.500 50.000 0.00 0.00 0.00 3.51
2286 2734 2.766828 GCCTACTCTGTTACCACCATCT 59.233 50.000 0.00 0.00 0.00 2.90
2287 2735 3.181474 GCCTACTCTGTTACCACCATCTC 60.181 52.174 0.00 0.00 0.00 2.75
2288 2736 3.066900 CCTACTCTGTTACCACCATCTCG 59.933 52.174 0.00 0.00 0.00 4.04
2289 2737 2.526432 ACTCTGTTACCACCATCTCGT 58.474 47.619 0.00 0.00 0.00 4.18
2290 2738 2.492484 ACTCTGTTACCACCATCTCGTC 59.508 50.000 0.00 0.00 0.00 4.20
2291 2739 1.471287 TCTGTTACCACCATCTCGTCG 59.529 52.381 0.00 0.00 0.00 5.12
2292 2740 0.528924 TGTTACCACCATCTCGTCGG 59.471 55.000 0.00 0.00 0.00 4.79
2293 2741 0.804933 GTTACCACCATCTCGTCGGC 60.805 60.000 0.00 0.00 0.00 5.54
2294 2742 0.968901 TTACCACCATCTCGTCGGCT 60.969 55.000 0.00 0.00 0.00 5.52
2295 2743 1.663379 TACCACCATCTCGTCGGCTG 61.663 60.000 0.00 0.00 0.00 4.85
2296 2744 2.887568 CACCATCTCGTCGGCTGC 60.888 66.667 0.00 0.00 0.00 5.25
2297 2745 3.071206 ACCATCTCGTCGGCTGCT 61.071 61.111 0.00 0.00 0.00 4.24
2298 2746 2.279120 CCATCTCGTCGGCTGCTC 60.279 66.667 0.00 0.00 0.00 4.26
2299 2747 2.491621 CATCTCGTCGGCTGCTCA 59.508 61.111 0.00 0.00 0.00 4.26
2300 2748 1.067084 CATCTCGTCGGCTGCTCAT 59.933 57.895 0.00 0.00 0.00 2.90
2301 2749 0.529337 CATCTCGTCGGCTGCTCATT 60.529 55.000 0.00 0.00 0.00 2.57
2302 2750 0.249238 ATCTCGTCGGCTGCTCATTC 60.249 55.000 0.00 0.00 0.00 2.67
2303 2751 1.140589 CTCGTCGGCTGCTCATTCT 59.859 57.895 0.00 0.00 0.00 2.40
2304 2752 0.869454 CTCGTCGGCTGCTCATTCTC 60.869 60.000 0.00 0.00 0.00 2.87
2305 2753 1.880340 CGTCGGCTGCTCATTCTCC 60.880 63.158 0.00 0.00 0.00 3.71
2306 2754 1.522580 GTCGGCTGCTCATTCTCCC 60.523 63.158 0.00 0.00 0.00 4.30
2307 2755 2.587194 CGGCTGCTCATTCTCCCG 60.587 66.667 0.00 0.00 0.00 5.14
2308 2756 2.899339 GGCTGCTCATTCTCCCGC 60.899 66.667 0.00 0.00 0.00 6.13
2309 2757 2.899339 GCTGCTCATTCTCCCGCC 60.899 66.667 0.00 0.00 0.00 6.13
2310 2758 2.586245 CTGCTCATTCTCCCGCCA 59.414 61.111 0.00 0.00 0.00 5.69
2311 2759 1.523258 CTGCTCATTCTCCCGCCAG 60.523 63.158 0.00 0.00 0.00 4.85
2312 2760 2.899339 GCTCATTCTCCCGCCAGC 60.899 66.667 0.00 0.00 0.00 4.85
2313 2761 2.906458 CTCATTCTCCCGCCAGCT 59.094 61.111 0.00 0.00 0.00 4.24
2314 2762 2.032860 GCTCATTCTCCCGCCAGCTA 62.033 60.000 0.00 0.00 0.00 3.32
2315 2763 0.683973 CTCATTCTCCCGCCAGCTAT 59.316 55.000 0.00 0.00 0.00 2.97
2316 2764 0.394192 TCATTCTCCCGCCAGCTATG 59.606 55.000 0.00 0.00 0.00 2.23
2327 2775 2.622064 CCAGCTATGGTACCAAGTCC 57.378 55.000 20.76 7.85 42.17 3.85
2328 2776 2.119495 CCAGCTATGGTACCAAGTCCT 58.881 52.381 20.76 10.10 42.17 3.85
2329 2777 2.505819 CCAGCTATGGTACCAAGTCCTT 59.494 50.000 20.76 3.33 42.17 3.36
2330 2778 3.054361 CCAGCTATGGTACCAAGTCCTTT 60.054 47.826 20.76 2.49 42.17 3.11
2331 2779 4.192317 CAGCTATGGTACCAAGTCCTTTC 58.808 47.826 20.76 2.69 0.00 2.62
2332 2780 3.200165 AGCTATGGTACCAAGTCCTTTCC 59.800 47.826 20.76 3.65 0.00 3.13
2333 2781 3.200165 GCTATGGTACCAAGTCCTTTCCT 59.800 47.826 20.76 0.00 0.00 3.36
2334 2782 3.721087 ATGGTACCAAGTCCTTTCCTG 57.279 47.619 20.76 0.00 0.00 3.86
2335 2783 1.702957 TGGTACCAAGTCCTTTCCTGG 59.297 52.381 13.60 0.00 0.00 4.45
2336 2784 1.703513 GGTACCAAGTCCTTTCCTGGT 59.296 52.381 7.15 0.00 0.00 4.00
2337 2785 2.107726 GGTACCAAGTCCTTTCCTGGTT 59.892 50.000 7.15 0.00 0.00 3.67
2338 2786 2.658807 ACCAAGTCCTTTCCTGGTTC 57.341 50.000 0.00 0.00 0.00 3.62
2339 2787 2.136026 ACCAAGTCCTTTCCTGGTTCT 58.864 47.619 0.00 0.00 0.00 3.01
2340 2788 2.158608 ACCAAGTCCTTTCCTGGTTCTG 60.159 50.000 0.00 0.00 0.00 3.02
2341 2789 2.106511 CCAAGTCCTTTCCTGGTTCTGA 59.893 50.000 0.00 0.00 0.00 3.27
2342 2790 3.245052 CCAAGTCCTTTCCTGGTTCTGAT 60.245 47.826 0.00 0.00 0.00 2.90
2343 2791 3.990959 AGTCCTTTCCTGGTTCTGATC 57.009 47.619 0.00 0.00 0.00 2.92
2344 2792 3.525862 AGTCCTTTCCTGGTTCTGATCT 58.474 45.455 0.00 0.00 0.00 2.75
2345 2793 4.689062 AGTCCTTTCCTGGTTCTGATCTA 58.311 43.478 0.00 0.00 0.00 1.98
2346 2794 4.468153 AGTCCTTTCCTGGTTCTGATCTAC 59.532 45.833 0.00 0.00 0.00 2.59
2347 2795 4.468153 GTCCTTTCCTGGTTCTGATCTACT 59.532 45.833 0.00 0.00 0.00 2.57
2348 2796 4.467795 TCCTTTCCTGGTTCTGATCTACTG 59.532 45.833 0.00 0.00 0.00 2.74
2349 2797 3.895232 TTCCTGGTTCTGATCTACTGC 57.105 47.619 0.00 0.00 0.00 4.40
2350 2798 3.107402 TCCTGGTTCTGATCTACTGCT 57.893 47.619 0.00 0.00 0.00 4.24
2351 2799 3.027412 TCCTGGTTCTGATCTACTGCTC 58.973 50.000 0.00 0.00 0.00 4.26
2352 2800 3.030291 CCTGGTTCTGATCTACTGCTCT 58.970 50.000 0.00 0.00 0.00 4.09
2353 2801 3.181477 CCTGGTTCTGATCTACTGCTCTG 60.181 52.174 0.00 0.00 0.00 3.35
2354 2802 2.167281 TGGTTCTGATCTACTGCTCTGC 59.833 50.000 0.00 0.00 0.00 4.26
2355 2803 2.482839 GGTTCTGATCTACTGCTCTGCC 60.483 54.545 0.00 0.00 0.00 4.85
2356 2804 1.028130 TCTGATCTACTGCTCTGCCG 58.972 55.000 0.00 0.00 0.00 5.69
2357 2805 0.597118 CTGATCTACTGCTCTGCCGC 60.597 60.000 0.00 0.00 0.00 6.53
2358 2806 1.300542 GATCTACTGCTCTGCCGCC 60.301 63.158 0.00 0.00 0.00 6.13
2359 2807 2.021068 GATCTACTGCTCTGCCGCCA 62.021 60.000 0.00 0.00 0.00 5.69
2360 2808 2.303549 ATCTACTGCTCTGCCGCCAC 62.304 60.000 0.00 0.00 0.00 5.01
2361 2809 3.300934 CTACTGCTCTGCCGCCACA 62.301 63.158 0.00 0.00 0.00 4.17
2362 2810 3.589654 TACTGCTCTGCCGCCACAC 62.590 63.158 0.00 0.00 0.00 3.82
2373 2821 4.722700 GCCACACCCTGACGCCAT 62.723 66.667 0.00 0.00 0.00 4.40
2374 2822 2.747460 CCACACCCTGACGCCATG 60.747 66.667 0.00 0.00 0.00 3.66
2375 2823 2.032528 CACACCCTGACGCCATGT 59.967 61.111 0.00 0.00 0.00 3.21
2376 2824 1.600636 CACACCCTGACGCCATGTT 60.601 57.895 0.00 0.00 0.00 2.71
2377 2825 1.600636 ACACCCTGACGCCATGTTG 60.601 57.895 0.00 0.00 0.00 3.33
2378 2826 1.600636 CACCCTGACGCCATGTTGT 60.601 57.895 0.00 0.00 0.00 3.32
2379 2827 0.321210 CACCCTGACGCCATGTTGTA 60.321 55.000 0.00 0.00 0.00 2.41
2380 2828 0.321298 ACCCTGACGCCATGTTGTAC 60.321 55.000 0.00 0.00 0.00 2.90
2381 2829 1.358725 CCCTGACGCCATGTTGTACG 61.359 60.000 0.00 0.00 0.00 3.67
2382 2830 0.389296 CCTGACGCCATGTTGTACGA 60.389 55.000 0.00 0.00 0.00 3.43
2383 2831 0.992072 CTGACGCCATGTTGTACGAG 59.008 55.000 0.00 0.00 0.00 4.18
2384 2832 0.315886 TGACGCCATGTTGTACGAGT 59.684 50.000 0.00 0.00 0.00 4.18
2385 2833 0.713883 GACGCCATGTTGTACGAGTG 59.286 55.000 0.00 0.00 0.00 3.51
2386 2834 0.669318 ACGCCATGTTGTACGAGTGG 60.669 55.000 9.28 9.28 0.00 4.00
2387 2835 0.669318 CGCCATGTTGTACGAGTGGT 60.669 55.000 13.47 0.00 32.56 4.16
2388 2836 0.796312 GCCATGTTGTACGAGTGGTG 59.204 55.000 13.47 0.00 32.56 4.17
2389 2837 1.438651 CCATGTTGTACGAGTGGTGG 58.561 55.000 6.37 0.00 0.00 4.61
2390 2838 1.001520 CCATGTTGTACGAGTGGTGGA 59.998 52.381 6.37 0.00 0.00 4.02
2391 2839 2.354704 CCATGTTGTACGAGTGGTGGAT 60.355 50.000 6.37 0.00 0.00 3.41
2392 2840 2.736144 TGTTGTACGAGTGGTGGATC 57.264 50.000 0.00 0.00 0.00 3.36
2393 2841 1.068125 TGTTGTACGAGTGGTGGATCG 60.068 52.381 0.00 0.00 44.36 3.69
2394 2842 1.200716 GTTGTACGAGTGGTGGATCGA 59.799 52.381 1.13 0.00 41.40 3.59
2395 2843 1.758936 TGTACGAGTGGTGGATCGAT 58.241 50.000 0.00 0.00 41.40 3.59
2396 2844 1.404035 TGTACGAGTGGTGGATCGATG 59.596 52.381 0.54 0.00 41.40 3.84
2397 2845 0.384309 TACGAGTGGTGGATCGATGC 59.616 55.000 10.37 10.37 41.40 3.91
2398 2846 1.592669 CGAGTGGTGGATCGATGCC 60.593 63.158 14.82 10.30 41.40 4.40
2399 2847 1.826024 GAGTGGTGGATCGATGCCT 59.174 57.895 14.82 3.74 0.00 4.75
2400 2848 0.531532 GAGTGGTGGATCGATGCCTG 60.532 60.000 14.82 0.00 0.00 4.85
2401 2849 2.182842 GTGGTGGATCGATGCCTGC 61.183 63.158 14.82 4.71 0.00 4.85
2402 2850 2.369633 TGGTGGATCGATGCCTGCT 61.370 57.895 14.82 0.00 0.00 4.24
2403 2851 1.596477 GGTGGATCGATGCCTGCTC 60.596 63.158 14.82 0.00 0.00 4.26
2404 2852 1.953138 GTGGATCGATGCCTGCTCG 60.953 63.158 14.82 5.13 37.47 5.03
2405 2853 2.356793 GGATCGATGCCTGCTCGG 60.357 66.667 0.54 0.00 36.78 4.63
2422 2870 4.681978 GCGGTGCCTTCCTCGTGT 62.682 66.667 0.00 0.00 0.00 4.49
2423 2871 2.967397 CGGTGCCTTCCTCGTGTA 59.033 61.111 0.00 0.00 0.00 2.90
2424 2872 1.153823 CGGTGCCTTCCTCGTGTAG 60.154 63.158 0.00 0.00 0.00 2.74
2425 2873 1.592400 CGGTGCCTTCCTCGTGTAGA 61.592 60.000 0.00 0.00 0.00 2.59
2426 2874 0.606604 GGTGCCTTCCTCGTGTAGAA 59.393 55.000 0.00 0.00 0.00 2.10
2427 2875 1.001633 GGTGCCTTCCTCGTGTAGAAA 59.998 52.381 0.00 0.00 0.00 2.52
2428 2876 2.549349 GGTGCCTTCCTCGTGTAGAAAA 60.549 50.000 0.00 0.00 0.00 2.29
2429 2877 2.737252 GTGCCTTCCTCGTGTAGAAAAG 59.263 50.000 0.00 0.00 0.00 2.27
2430 2878 2.289444 TGCCTTCCTCGTGTAGAAAAGG 60.289 50.000 0.00 0.00 41.39 3.11
2431 2879 2.028385 GCCTTCCTCGTGTAGAAAAGGA 60.028 50.000 11.06 0.00 41.16 3.36
2432 2880 3.586892 CCTTCCTCGTGTAGAAAAGGAC 58.413 50.000 0.00 0.00 41.16 3.85
2433 2881 3.258622 CCTTCCTCGTGTAGAAAAGGACT 59.741 47.826 0.00 0.00 41.16 3.85
2434 2882 4.461781 CCTTCCTCGTGTAGAAAAGGACTA 59.538 45.833 0.00 0.00 41.16 2.59
2435 2883 5.393243 CCTTCCTCGTGTAGAAAAGGACTAG 60.393 48.000 0.00 0.00 41.16 2.57
2436 2884 3.442977 TCCTCGTGTAGAAAAGGACTAGC 59.557 47.826 0.00 0.00 33.00 3.42
2437 2885 3.192844 CCTCGTGTAGAAAAGGACTAGCA 59.807 47.826 0.00 0.00 0.00 3.49
2438 2886 4.142138 CCTCGTGTAGAAAAGGACTAGCAT 60.142 45.833 0.00 0.00 0.00 3.79
2439 2887 4.995124 TCGTGTAGAAAAGGACTAGCATC 58.005 43.478 0.00 0.00 0.00 3.91
2440 2888 4.113354 CGTGTAGAAAAGGACTAGCATCC 58.887 47.826 0.00 0.00 39.28 3.51
2453 2901 2.791170 GCATCCTTGCTCCTCTTGG 58.209 57.895 0.00 0.00 45.77 3.61
2454 2902 0.034670 GCATCCTTGCTCCTCTTGGT 60.035 55.000 0.00 0.00 45.77 3.67
2455 2903 1.615384 GCATCCTTGCTCCTCTTGGTT 60.615 52.381 0.00 0.00 45.77 3.67
2456 2904 2.089980 CATCCTTGCTCCTCTTGGTTG 58.910 52.381 0.00 0.00 34.23 3.77
2457 2905 0.250901 TCCTTGCTCCTCTTGGTTGC 60.251 55.000 0.00 0.00 35.63 4.17
2458 2906 0.538057 CCTTGCTCCTCTTGGTTGCA 60.538 55.000 0.00 0.00 40.08 4.08
2459 2907 1.542492 CTTGCTCCTCTTGGTTGCAT 58.458 50.000 0.00 0.00 40.84 3.96
2460 2908 1.201647 CTTGCTCCTCTTGGTTGCATG 59.798 52.381 0.00 0.00 40.84 4.06
2461 2909 0.609957 TGCTCCTCTTGGTTGCATGG 60.610 55.000 0.00 0.00 38.28 3.66
2462 2910 1.941999 GCTCCTCTTGGTTGCATGGC 61.942 60.000 0.00 0.00 35.36 4.40
2463 2911 0.609957 CTCCTCTTGGTTGCATGGCA 60.610 55.000 0.00 0.00 36.47 4.92
2464 2912 0.895100 TCCTCTTGGTTGCATGGCAC 60.895 55.000 0.00 0.00 38.71 5.01
2465 2913 1.588082 CTCTTGGTTGCATGGCACC 59.412 57.895 0.00 0.00 38.71 5.01
2466 2914 0.896940 CTCTTGGTTGCATGGCACCT 60.897 55.000 6.83 0.00 38.71 4.00
2467 2915 0.895100 TCTTGGTTGCATGGCACCTC 60.895 55.000 6.83 0.00 38.71 3.85
2468 2916 0.896940 CTTGGTTGCATGGCACCTCT 60.897 55.000 6.83 0.00 38.71 3.69
2469 2917 1.180456 TTGGTTGCATGGCACCTCTG 61.180 55.000 6.83 0.00 38.71 3.35
2470 2918 2.345760 GGTTGCATGGCACCTCTGG 61.346 63.158 0.00 0.00 38.71 3.86
2471 2919 1.303561 GTTGCATGGCACCTCTGGA 60.304 57.895 0.00 0.00 38.71 3.86
2472 2920 0.895100 GTTGCATGGCACCTCTGGAA 60.895 55.000 0.00 0.00 38.71 3.53
2473 2921 0.178967 TTGCATGGCACCTCTGGAAA 60.179 50.000 0.00 0.00 38.71 3.13
2474 2922 0.609957 TGCATGGCACCTCTGGAAAG 60.610 55.000 0.00 0.00 31.71 2.62
2475 2923 1.941999 GCATGGCACCTCTGGAAAGC 61.942 60.000 0.00 0.00 0.00 3.51
2476 2924 0.609957 CATGGCACCTCTGGAAAGCA 60.610 55.000 0.00 0.00 0.00 3.91
2477 2925 0.610232 ATGGCACCTCTGGAAAGCAC 60.610 55.000 0.00 0.00 0.00 4.40
2478 2926 1.973812 GGCACCTCTGGAAAGCACC 60.974 63.158 0.00 0.00 0.00 5.01
2479 2927 2.328099 GCACCTCTGGAAAGCACCG 61.328 63.158 0.00 0.00 0.00 4.94
2480 2928 1.672356 CACCTCTGGAAAGCACCGG 60.672 63.158 0.00 0.00 37.63 5.28
2481 2929 1.841556 ACCTCTGGAAAGCACCGGA 60.842 57.895 9.46 0.00 42.28 5.14
2482 2930 1.374947 CCTCTGGAAAGCACCGGAA 59.625 57.895 9.46 0.00 43.61 4.30
2483 2931 0.955919 CCTCTGGAAAGCACCGGAAC 60.956 60.000 9.46 0.00 43.61 3.62
2496 2944 4.914291 GGAACGGCTGTGTTTTCG 57.086 55.556 0.00 0.00 30.75 3.46
2497 2945 2.313267 GGAACGGCTGTGTTTTCGA 58.687 52.632 0.00 0.00 30.75 3.71
2498 2946 0.872388 GGAACGGCTGTGTTTTCGAT 59.128 50.000 0.00 0.00 30.75 3.59
2499 2947 1.399727 GGAACGGCTGTGTTTTCGATG 60.400 52.381 0.00 0.00 30.75 3.84
2500 2948 0.591170 AACGGCTGTGTTTTCGATGG 59.409 50.000 0.00 0.00 0.00 3.51
2501 2949 1.154225 CGGCTGTGTTTTCGATGGC 60.154 57.895 0.00 0.00 0.00 4.40
2502 2950 1.577328 CGGCTGTGTTTTCGATGGCT 61.577 55.000 0.00 0.00 0.00 4.75
2503 2951 0.598065 GGCTGTGTTTTCGATGGCTT 59.402 50.000 0.00 0.00 0.00 4.35
2504 2952 1.666888 GGCTGTGTTTTCGATGGCTTG 60.667 52.381 0.00 0.00 0.00 4.01
2505 2953 1.689959 CTGTGTTTTCGATGGCTTGC 58.310 50.000 0.00 0.00 0.00 4.01
2506 2954 1.001487 CTGTGTTTTCGATGGCTTGCA 60.001 47.619 0.00 0.00 0.00 4.08
2507 2955 1.001487 TGTGTTTTCGATGGCTTGCAG 60.001 47.619 0.00 0.00 0.00 4.41
2508 2956 1.001378 GTGTTTTCGATGGCTTGCAGT 60.001 47.619 0.00 0.00 0.00 4.40
2509 2957 1.266718 TGTTTTCGATGGCTTGCAGTC 59.733 47.619 0.00 0.00 0.00 3.51
2510 2958 0.881118 TTTTCGATGGCTTGCAGTCC 59.119 50.000 0.00 0.00 0.00 3.85
2511 2959 0.036732 TTTCGATGGCTTGCAGTCCT 59.963 50.000 7.67 0.00 0.00 3.85
2512 2960 0.391661 TTCGATGGCTTGCAGTCCTC 60.392 55.000 7.67 3.07 0.00 3.71
2513 2961 1.817099 CGATGGCTTGCAGTCCTCC 60.817 63.158 7.67 0.00 0.00 4.30
2514 2962 1.300963 GATGGCTTGCAGTCCTCCA 59.699 57.895 7.67 3.10 0.00 3.86
2515 2963 0.106819 GATGGCTTGCAGTCCTCCAT 60.107 55.000 7.67 7.25 39.99 3.41
2516 2964 1.141657 GATGGCTTGCAGTCCTCCATA 59.858 52.381 7.67 0.00 37.63 2.74
2517 2965 0.253044 TGGCTTGCAGTCCTCCATAC 59.747 55.000 7.67 0.00 0.00 2.39
2518 2966 0.253044 GGCTTGCAGTCCTCCATACA 59.747 55.000 0.00 0.00 0.00 2.29
2519 2967 1.373570 GCTTGCAGTCCTCCATACAC 58.626 55.000 0.00 0.00 0.00 2.90
2520 2968 1.645034 CTTGCAGTCCTCCATACACG 58.355 55.000 0.00 0.00 0.00 4.49
2521 2969 0.973632 TTGCAGTCCTCCATACACGT 59.026 50.000 0.00 0.00 0.00 4.49
2522 2970 0.530744 TGCAGTCCTCCATACACGTC 59.469 55.000 0.00 0.00 0.00 4.34
2523 2971 0.179108 GCAGTCCTCCATACACGTCC 60.179 60.000 0.00 0.00 0.00 4.79
2524 2972 1.475403 CAGTCCTCCATACACGTCCT 58.525 55.000 0.00 0.00 0.00 3.85
2525 2973 2.651455 CAGTCCTCCATACACGTCCTA 58.349 52.381 0.00 0.00 0.00 2.94
2526 2974 2.358267 CAGTCCTCCATACACGTCCTAC 59.642 54.545 0.00 0.00 0.00 3.18
2527 2975 2.241685 AGTCCTCCATACACGTCCTACT 59.758 50.000 0.00 0.00 0.00 2.57
2528 2976 3.022406 GTCCTCCATACACGTCCTACTT 58.978 50.000 0.00 0.00 0.00 2.24
2529 2977 3.066481 GTCCTCCATACACGTCCTACTTC 59.934 52.174 0.00 0.00 0.00 3.01
2530 2978 3.021695 CCTCCATACACGTCCTACTTCA 58.978 50.000 0.00 0.00 0.00 3.02
2531 2979 3.066900 CCTCCATACACGTCCTACTTCAG 59.933 52.174 0.00 0.00 0.00 3.02
2532 2980 2.426024 TCCATACACGTCCTACTTCAGC 59.574 50.000 0.00 0.00 0.00 4.26
2533 2981 2.427453 CCATACACGTCCTACTTCAGCT 59.573 50.000 0.00 0.00 0.00 4.24
2534 2982 3.489398 CCATACACGTCCTACTTCAGCTC 60.489 52.174 0.00 0.00 0.00 4.09
2535 2983 1.617322 ACACGTCCTACTTCAGCTCA 58.383 50.000 0.00 0.00 0.00 4.26
2536 2984 2.171840 ACACGTCCTACTTCAGCTCAT 58.828 47.619 0.00 0.00 0.00 2.90
2537 2985 2.164624 ACACGTCCTACTTCAGCTCATC 59.835 50.000 0.00 0.00 0.00 2.92
2538 2986 2.164422 CACGTCCTACTTCAGCTCATCA 59.836 50.000 0.00 0.00 0.00 3.07
2539 2987 2.826128 ACGTCCTACTTCAGCTCATCAA 59.174 45.455 0.00 0.00 0.00 2.57
2540 2988 3.119316 ACGTCCTACTTCAGCTCATCAAG 60.119 47.826 0.00 0.00 0.00 3.02
2541 2989 3.129462 CGTCCTACTTCAGCTCATCAAGA 59.871 47.826 0.00 0.00 0.00 3.02
2542 2990 4.380973 CGTCCTACTTCAGCTCATCAAGAA 60.381 45.833 0.00 0.00 0.00 2.52
2543 2991 4.867608 GTCCTACTTCAGCTCATCAAGAAC 59.132 45.833 0.00 0.00 0.00 3.01
2544 2992 3.862267 CCTACTTCAGCTCATCAAGAACG 59.138 47.826 0.00 0.00 0.00 3.95
2545 2993 3.667497 ACTTCAGCTCATCAAGAACGA 57.333 42.857 0.00 0.00 0.00 3.85
2546 2994 4.199432 ACTTCAGCTCATCAAGAACGAT 57.801 40.909 0.00 0.00 0.00 3.73
2547 2995 3.931468 ACTTCAGCTCATCAAGAACGATG 59.069 43.478 0.00 0.00 43.50 3.84
2548 2996 2.274437 TCAGCTCATCAAGAACGATGC 58.726 47.619 0.00 0.00 42.15 3.91
2549 2997 2.093816 TCAGCTCATCAAGAACGATGCT 60.094 45.455 0.00 0.00 42.15 3.79
2550 2998 2.284684 CAGCTCATCAAGAACGATGCTC 59.715 50.000 0.00 0.00 42.15 4.26
2551 2999 1.257415 GCTCATCAAGAACGATGCTCG 59.743 52.381 0.00 4.36 46.93 5.03
2552 3000 1.257415 CTCATCAAGAACGATGCTCGC 59.743 52.381 5.63 0.00 45.12 5.03
2553 3001 0.302890 CATCAAGAACGATGCTCGCC 59.697 55.000 5.63 0.00 45.12 5.54
2554 3002 0.176680 ATCAAGAACGATGCTCGCCT 59.823 50.000 5.63 1.73 45.12 5.52
2555 3003 0.037326 TCAAGAACGATGCTCGCCTT 60.037 50.000 5.63 6.70 45.12 4.35
2556 3004 0.798776 CAAGAACGATGCTCGCCTTT 59.201 50.000 5.63 0.00 45.12 3.11
2557 3005 0.798776 AAGAACGATGCTCGCCTTTG 59.201 50.000 5.63 0.00 45.12 2.77
2558 3006 1.021390 AGAACGATGCTCGCCTTTGG 61.021 55.000 5.63 0.00 45.12 3.28
2559 3007 1.298859 GAACGATGCTCGCCTTTGGT 61.299 55.000 5.63 0.00 45.12 3.67
2560 3008 0.036765 AACGATGCTCGCCTTTGGTA 60.037 50.000 5.63 0.00 45.12 3.25
2561 3009 0.739813 ACGATGCTCGCCTTTGGTAC 60.740 55.000 5.63 0.00 45.12 3.34
2562 3010 0.739462 CGATGCTCGCCTTTGGTACA 60.739 55.000 0.00 0.00 31.14 2.90
2563 3011 1.009829 GATGCTCGCCTTTGGTACAG 58.990 55.000 0.00 0.00 42.39 2.74
2564 3012 0.392998 ATGCTCGCCTTTGGTACAGG 60.393 55.000 0.00 0.00 42.39 4.00
2565 3013 1.745489 GCTCGCCTTTGGTACAGGG 60.745 63.158 0.00 0.00 42.39 4.45
2566 3014 1.078426 CTCGCCTTTGGTACAGGGG 60.078 63.158 8.12 8.12 44.11 4.79
2567 3015 1.838073 CTCGCCTTTGGTACAGGGGT 61.838 60.000 12.69 0.00 43.40 4.95
2568 3016 1.674322 CGCCTTTGGTACAGGGGTG 60.674 63.158 6.62 0.92 42.39 4.61
2569 3017 1.304134 GCCTTTGGTACAGGGGTGG 60.304 63.158 0.00 0.00 42.39 4.61
2570 3018 1.304134 CCTTTGGTACAGGGGTGGC 60.304 63.158 0.00 0.00 42.39 5.01
2571 3019 1.674322 CTTTGGTACAGGGGTGGCG 60.674 63.158 0.00 0.00 42.39 5.69
2572 3020 3.853698 TTTGGTACAGGGGTGGCGC 62.854 63.158 0.00 0.00 42.39 6.53
2582 3030 4.481112 GGTGGCGCGCTTGGATTG 62.481 66.667 32.29 0.00 0.00 2.67
2583 3031 4.481112 GTGGCGCGCTTGGATTGG 62.481 66.667 32.29 0.00 0.00 3.16
2584 3032 4.713735 TGGCGCGCTTGGATTGGA 62.714 61.111 32.29 0.67 0.00 3.53
2585 3033 4.179579 GGCGCGCTTGGATTGGAC 62.180 66.667 32.29 5.91 0.00 4.02
2586 3034 3.430862 GCGCGCTTGGATTGGACA 61.431 61.111 26.67 0.00 0.00 4.02
2587 3035 2.976840 GCGCGCTTGGATTGGACAA 61.977 57.895 26.67 0.00 0.00 3.18
2588 3036 1.154225 CGCGCTTGGATTGGACAAC 60.154 57.895 5.56 0.00 0.00 3.32
2589 3037 1.577328 CGCGCTTGGATTGGACAACT 61.577 55.000 5.56 0.00 0.00 3.16
2590 3038 0.598065 GCGCTTGGATTGGACAACTT 59.402 50.000 0.00 0.00 0.00 2.66
2591 3039 1.000274 GCGCTTGGATTGGACAACTTT 60.000 47.619 0.00 0.00 0.00 2.66
2592 3040 2.922335 GCGCTTGGATTGGACAACTTTC 60.922 50.000 0.00 0.00 0.00 2.62
2593 3041 2.554032 CGCTTGGATTGGACAACTTTCT 59.446 45.455 0.00 0.00 0.00 2.52
2594 3042 3.004734 CGCTTGGATTGGACAACTTTCTT 59.995 43.478 0.00 0.00 0.00 2.52
2595 3043 4.550422 GCTTGGATTGGACAACTTTCTTC 58.450 43.478 0.00 0.00 0.00 2.87
2596 3044 4.559502 GCTTGGATTGGACAACTTTCTTCC 60.560 45.833 0.00 0.00 0.00 3.46
2597 3045 3.496331 TGGATTGGACAACTTTCTTCCC 58.504 45.455 0.00 0.00 0.00 3.97
2598 3046 2.488153 GGATTGGACAACTTTCTTCCCG 59.512 50.000 0.00 0.00 0.00 5.14
2599 3047 3.408634 GATTGGACAACTTTCTTCCCGA 58.591 45.455 0.00 0.00 0.00 5.14
2600 3048 2.543777 TGGACAACTTTCTTCCCGAG 57.456 50.000 0.00 0.00 0.00 4.63
2601 3049 1.766496 TGGACAACTTTCTTCCCGAGT 59.234 47.619 0.00 0.00 0.00 4.18
2602 3050 2.967201 TGGACAACTTTCTTCCCGAGTA 59.033 45.455 0.00 0.00 0.00 2.59
2603 3051 3.006537 TGGACAACTTTCTTCCCGAGTAG 59.993 47.826 0.00 0.00 0.00 2.57
2604 3052 2.994578 GACAACTTTCTTCCCGAGTAGC 59.005 50.000 0.00 0.00 0.00 3.58
2605 3053 2.289506 ACAACTTTCTTCCCGAGTAGCC 60.290 50.000 0.00 0.00 0.00 3.93
2606 3054 0.903236 ACTTTCTTCCCGAGTAGCCC 59.097 55.000 0.00 0.00 0.00 5.19
2607 3055 0.178301 CTTTCTTCCCGAGTAGCCCC 59.822 60.000 0.00 0.00 0.00 5.80
2608 3056 1.269703 TTTCTTCCCGAGTAGCCCCC 61.270 60.000 0.00 0.00 0.00 5.40
2609 3057 2.365105 CTTCCCGAGTAGCCCCCA 60.365 66.667 0.00 0.00 0.00 4.96
2610 3058 1.766461 CTTCCCGAGTAGCCCCCAT 60.766 63.158 0.00 0.00 0.00 4.00
2611 3059 2.044806 CTTCCCGAGTAGCCCCCATG 62.045 65.000 0.00 0.00 0.00 3.66
2612 3060 2.768344 CCCGAGTAGCCCCCATGT 60.768 66.667 0.00 0.00 0.00 3.21
2613 3061 2.505982 CCGAGTAGCCCCCATGTG 59.494 66.667 0.00 0.00 0.00 3.21
2614 3062 2.203070 CGAGTAGCCCCCATGTGC 60.203 66.667 0.00 0.00 0.00 4.57
2615 3063 2.193248 GAGTAGCCCCCATGTGCC 59.807 66.667 0.00 0.00 0.00 5.01
2616 3064 2.613696 AGTAGCCCCCATGTGCCA 60.614 61.111 0.00 0.00 0.00 4.92
2617 3065 1.999634 GAGTAGCCCCCATGTGCCAT 62.000 60.000 0.00 0.00 0.00 4.40
2618 3066 1.829533 GTAGCCCCCATGTGCCATG 60.830 63.158 7.88 7.88 0.00 3.66
2619 3067 2.315794 TAGCCCCCATGTGCCATGT 61.316 57.895 12.36 0.00 0.00 3.21
2620 3068 2.570774 TAGCCCCCATGTGCCATGTG 62.571 60.000 12.36 3.40 0.00 3.21
2621 3069 2.760799 CCCCCATGTGCCATGTGG 60.761 66.667 12.36 10.63 38.53 4.17
2622 3070 2.359797 CCCCATGTGCCATGTGGA 59.640 61.111 9.92 0.00 37.39 4.02
2623 3071 1.075822 CCCCATGTGCCATGTGGAT 60.076 57.895 9.92 0.00 37.39 3.41
2624 3072 1.396607 CCCCATGTGCCATGTGGATG 61.397 60.000 9.92 0.00 37.39 3.51
2625 3073 0.685131 CCCATGTGCCATGTGGATGT 60.685 55.000 2.55 0.00 37.39 3.06
2626 3074 1.409942 CCCATGTGCCATGTGGATGTA 60.410 52.381 2.55 0.00 37.39 2.29
2627 3075 2.377073 CCATGTGCCATGTGGATGTAA 58.623 47.619 2.55 0.00 37.39 2.41
2628 3076 2.099592 CCATGTGCCATGTGGATGTAAC 59.900 50.000 2.55 0.00 37.39 2.50
2629 3077 2.877097 TGTGCCATGTGGATGTAACT 57.123 45.000 2.55 0.00 37.39 2.24
2630 3078 3.153369 TGTGCCATGTGGATGTAACTT 57.847 42.857 2.55 0.00 37.39 2.66
2631 3079 3.081061 TGTGCCATGTGGATGTAACTTC 58.919 45.455 2.55 0.00 37.39 3.01
2632 3080 3.244875 TGTGCCATGTGGATGTAACTTCT 60.245 43.478 2.55 0.00 37.39 2.85
2633 3081 4.019771 TGTGCCATGTGGATGTAACTTCTA 60.020 41.667 2.55 0.00 37.39 2.10
2634 3082 5.126067 GTGCCATGTGGATGTAACTTCTAT 58.874 41.667 2.55 0.00 37.39 1.98
2635 3083 5.008019 GTGCCATGTGGATGTAACTTCTATG 59.992 44.000 2.55 0.00 37.39 2.23
2636 3084 5.126067 GCCATGTGGATGTAACTTCTATGT 58.874 41.667 2.55 0.00 37.39 2.29
2637 3085 6.126911 TGCCATGTGGATGTAACTTCTATGTA 60.127 38.462 2.55 0.00 37.39 2.29
2638 3086 6.936900 GCCATGTGGATGTAACTTCTATGTAT 59.063 38.462 2.55 0.00 37.39 2.29
2639 3087 7.118390 GCCATGTGGATGTAACTTCTATGTATC 59.882 40.741 2.55 0.00 37.39 2.24
2640 3088 8.370940 CCATGTGGATGTAACTTCTATGTATCT 58.629 37.037 0.00 0.00 37.39 1.98
2667 3115 7.416817 TCAATGAATGATACATAACTTTGCGG 58.583 34.615 0.00 0.00 31.50 5.69
2668 3116 7.281999 TCAATGAATGATACATAACTTTGCGGA 59.718 33.333 0.00 0.00 31.50 5.54
2669 3117 7.750229 ATGAATGATACATAACTTTGCGGAT 57.250 32.000 0.00 0.00 0.00 4.18
2670 3118 7.566760 TGAATGATACATAACTTTGCGGATT 57.433 32.000 0.00 0.00 0.00 3.01
2671 3119 7.639039 TGAATGATACATAACTTTGCGGATTC 58.361 34.615 0.00 0.00 0.00 2.52
2672 3120 7.498900 TGAATGATACATAACTTTGCGGATTCT 59.501 33.333 0.00 0.00 0.00 2.40
2673 3121 7.807977 ATGATACATAACTTTGCGGATTCTT 57.192 32.000 0.00 0.00 0.00 2.52
2674 3122 7.015226 TGATACATAACTTTGCGGATTCTTG 57.985 36.000 0.00 0.00 0.00 3.02
2675 3123 6.821160 TGATACATAACTTTGCGGATTCTTGA 59.179 34.615 0.00 0.00 0.00 3.02
2676 3124 5.957842 ACATAACTTTGCGGATTCTTGAA 57.042 34.783 0.00 0.00 0.00 2.69
2677 3125 6.325919 ACATAACTTTGCGGATTCTTGAAA 57.674 33.333 0.00 0.00 0.00 2.69
2678 3126 6.744112 ACATAACTTTGCGGATTCTTGAAAA 58.256 32.000 0.00 0.00 0.00 2.29
2702 3150 0.879765 CTTCAGAAGCAAGCCCACAG 59.120 55.000 0.00 0.00 0.00 3.66
2729 3178 2.618709 ACATCGTATGCTCATCTCGTGA 59.381 45.455 0.00 0.00 35.05 4.35
2786 4152 6.208204 CACTGAATTTCTGGAAGGTGAAGAAT 59.792 38.462 8.00 0.00 30.41 2.40
2822 4189 4.751098 TGAACTGATAACGTTGGTGTTACC 59.249 41.667 11.99 0.00 37.16 2.85
2844 4211 5.659971 ACCGTGGAAATATTGGACTACTACT 59.340 40.000 0.00 0.00 0.00 2.57
2845 4212 6.155737 ACCGTGGAAATATTGGACTACTACTT 59.844 38.462 0.00 0.00 0.00 2.24
2846 4213 6.700520 CCGTGGAAATATTGGACTACTACTTC 59.299 42.308 0.00 0.00 0.00 3.01
2857 4227 8.617290 TTGGACTACTACTTCATTTTTCTTCC 57.383 34.615 0.00 0.00 0.00 3.46
2909 4279 3.217626 GCTCCCATATCCCTGTCAAAAG 58.782 50.000 0.00 0.00 0.00 2.27
2967 4339 8.427276 TCAGAAGATCATATATTCACTTGTGCT 58.573 33.333 0.00 0.00 33.11 4.40
2968 4340 8.710551 CAGAAGATCATATATTCACTTGTGCTC 58.289 37.037 0.00 0.00 33.11 4.26
2969 4341 8.427276 AGAAGATCATATATTCACTTGTGCTCA 58.573 33.333 0.00 0.00 33.11 4.26
2970 4342 8.604640 AAGATCATATATTCACTTGTGCTCAG 57.395 34.615 0.00 0.00 0.00 3.35
2971 4343 7.733969 AGATCATATATTCACTTGTGCTCAGT 58.266 34.615 0.00 0.00 0.00 3.41
2972 4344 7.656542 AGATCATATATTCACTTGTGCTCAGTG 59.343 37.037 0.00 10.29 35.10 3.66
2973 4345 5.525012 TCATATATTCACTTGTGCTCAGTGC 59.475 40.000 11.21 0.00 43.25 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 9.246670 TCTCATCATCATCCAACTTAATTGTTT 57.753 29.630 0.00 0.00 36.47 2.83
106 116 3.201487 TCACTTGATGCATCATCCTCCTT 59.799 43.478 29.13 6.76 39.87 3.36
161 171 5.452777 GTCACTTTGGCTTTGAGTATGAAC 58.547 41.667 0.00 0.00 0.00 3.18
181 191 1.773856 TTCTTGCACCCATCCGGTCA 61.774 55.000 0.00 0.00 43.58 4.02
230 240 5.916661 AGCATTTTTGAGCTCATCATCTT 57.083 34.783 19.04 0.00 37.89 2.40
254 264 0.597568 TGCCTTCACAATTGCTTCCG 59.402 50.000 5.05 0.00 0.00 4.30
284 294 2.778299 CCATTTTCCTCACCTCGTTGA 58.222 47.619 0.00 0.00 0.00 3.18
340 356 0.320771 TTTCTCTCTTCGGCTGCCAC 60.321 55.000 20.29 0.00 0.00 5.01
351 409 3.181439 CCTCCAAAACCACCTTTCTCTCT 60.181 47.826 0.00 0.00 0.00 3.10
629 855 2.568546 ACTCATACCTCCCATGGTGA 57.431 50.000 11.73 5.64 41.05 4.02
736 963 3.119708 GCAAGATCTTCAACGGCATCTTT 60.120 43.478 4.57 0.00 34.08 2.52
798 1031 4.557899 AGATGAATCTTCCTCCCTCTCT 57.442 45.455 0.00 0.00 31.97 3.10
843 1076 5.363868 ACATCATTCCTCGTCCTCATCTTTA 59.636 40.000 0.00 0.00 0.00 1.85
849 1100 2.166459 GACACATCATTCCTCGTCCTCA 59.834 50.000 0.00 0.00 0.00 3.86
911 1169 3.775866 TCATGCCCACAAATTCATCCAAT 59.224 39.130 0.00 0.00 0.00 3.16
921 1179 6.259608 CACAAGTTTAAAATCATGCCCACAAA 59.740 34.615 0.00 0.00 0.00 2.83
1008 1267 2.993911 CTAAAATACAGCGCGCGCCG 62.994 60.000 46.98 40.67 43.17 6.46
1009 1268 1.367665 CTAAAATACAGCGCGCGCC 60.368 57.895 46.98 30.60 43.17 6.53
1010 1269 1.998772 GCTAAAATACAGCGCGCGC 60.999 57.895 45.10 45.10 42.33 6.86
1011 1270 4.173659 GCTAAAATACAGCGCGCG 57.826 55.556 28.44 28.44 0.00 6.86
1016 1275 1.592350 GCAGACGCGCTAAAATACAGC 60.592 52.381 5.73 0.00 35.61 4.40
1017 1276 1.927174 AGCAGACGCGCTAAAATACAG 59.073 47.619 5.73 0.00 45.49 2.74
1018 1277 1.658596 CAGCAGACGCGCTAAAATACA 59.341 47.619 5.73 0.00 45.49 2.29
1019 1278 1.004927 CCAGCAGACGCGCTAAAATAC 60.005 52.381 5.73 0.00 45.49 1.89
1020 1279 1.134936 TCCAGCAGACGCGCTAAAATA 60.135 47.619 5.73 0.00 45.49 1.40
1021 1280 0.391130 TCCAGCAGACGCGCTAAAAT 60.391 50.000 5.73 0.00 45.49 1.82
1022 1281 1.005512 TCCAGCAGACGCGCTAAAA 60.006 52.632 5.73 0.00 45.49 1.52
1023 1282 1.736645 GTCCAGCAGACGCGCTAAA 60.737 57.895 5.73 0.00 45.49 1.85
1024 1283 2.126071 GTCCAGCAGACGCGCTAA 60.126 61.111 5.73 0.00 45.49 3.09
1031 1290 0.105039 CTTATCCGGGTCCAGCAGAC 59.895 60.000 0.00 0.00 45.51 3.51
1032 1291 1.048724 CCTTATCCGGGTCCAGCAGA 61.049 60.000 0.00 0.00 0.00 4.26
1033 1292 1.338136 ACCTTATCCGGGTCCAGCAG 61.338 60.000 0.00 0.00 30.15 4.24
1034 1293 1.306654 ACCTTATCCGGGTCCAGCA 60.307 57.895 0.00 0.00 30.15 4.41
1035 1294 1.446366 GACCTTATCCGGGTCCAGC 59.554 63.158 0.00 0.00 45.31 4.85
1109 1368 1.315690 CATGGCATGGAAGCAGTAGG 58.684 55.000 19.80 0.00 35.83 3.18
1209 1468 2.668632 CGGTGCACCCACATACCT 59.331 61.111 29.95 0.00 43.88 3.08
1231 1490 1.692042 CCAGCCTCTCCCTGGTCAT 60.692 63.158 0.00 0.00 43.86 3.06
1276 1535 1.875514 CCGGGCATACATGTCAATCAG 59.124 52.381 0.00 0.00 33.08 2.90
1281 1540 1.451207 GCACCGGGCATACATGTCA 60.451 57.895 6.32 0.00 43.97 3.58
1333 1592 2.464459 CCGTCCGCTTCTTCATGCC 61.464 63.158 0.00 0.00 0.00 4.40
1340 1599 2.600769 AGACCACCGTCCGCTTCT 60.601 61.111 0.00 0.00 40.12 2.85
1434 1693 1.499007 TCTGGCTTGAACCCCTTTCTT 59.501 47.619 0.00 0.00 34.97 2.52
1437 1696 0.537371 CGTCTGGCTTGAACCCCTTT 60.537 55.000 0.00 0.00 0.00 3.11
1556 1821 2.292267 CGTAATGCTCCATCCTTGCTT 58.708 47.619 0.00 0.00 0.00 3.91
1881 2146 2.748647 TCGCCGTCGATCTCCACA 60.749 61.111 0.00 0.00 40.21 4.17
2094 2386 5.147162 GTTGGCTCTTTTCGTCTTATGTTG 58.853 41.667 0.00 0.00 0.00 3.33
2155 2553 4.703897 ACATGTAACGGGAGTCATAATGG 58.296 43.478 0.00 0.00 46.69 3.16
2160 2558 3.767673 ACTGTACATGTAACGGGAGTCAT 59.232 43.478 7.25 0.00 46.69 3.06
2169 2567 3.192001 TCTCCCGACACTGTACATGTAAC 59.808 47.826 7.25 2.99 0.00 2.50
2185 2584 0.816825 CATGTTGGATGCCTCTCCCG 60.817 60.000 0.00 0.00 34.12 5.14
2234 2682 1.149148 GAGTCCTTTTCTGGTGTCGC 58.851 55.000 0.00 0.00 0.00 5.19
2235 2683 1.419374 CGAGTCCTTTTCTGGTGTCG 58.581 55.000 0.00 0.00 0.00 4.35
2239 2687 1.339151 GGATGCGAGTCCTTTTCTGGT 60.339 52.381 0.00 0.00 35.32 4.00
2240 2688 1.373570 GGATGCGAGTCCTTTTCTGG 58.626 55.000 0.00 0.00 35.32 3.86
2241 2689 1.373570 GGGATGCGAGTCCTTTTCTG 58.626 55.000 6.49 0.00 38.38 3.02
2242 2690 0.253327 GGGGATGCGAGTCCTTTTCT 59.747 55.000 6.49 0.00 38.38 2.52
2243 2691 1.090052 CGGGGATGCGAGTCCTTTTC 61.090 60.000 6.49 0.00 38.38 2.29
2244 2692 1.078426 CGGGGATGCGAGTCCTTTT 60.078 57.895 6.49 0.00 38.38 2.27
2246 2694 3.470888 CCGGGGATGCGAGTCCTT 61.471 66.667 0.00 0.00 38.38 3.36
2247 2695 4.779733 ACCGGGGATGCGAGTCCT 62.780 66.667 6.32 0.00 38.38 3.85
2248 2696 4.530857 CACCGGGGATGCGAGTCC 62.531 72.222 6.32 0.00 37.56 3.85
2254 2702 3.462199 GAGTAGGCACCGGGGATGC 62.462 68.421 8.67 7.63 42.62 3.91
2255 2703 1.762460 AGAGTAGGCACCGGGGATG 60.762 63.158 8.67 0.00 0.00 3.51
2258 2706 0.974010 TAACAGAGTAGGCACCGGGG 60.974 60.000 6.32 0.84 0.00 5.73
2260 2708 0.175073 GGTAACAGAGTAGGCACCGG 59.825 60.000 0.00 0.00 0.00 5.28
2261 2709 0.892755 TGGTAACAGAGTAGGCACCG 59.107 55.000 0.00 0.00 46.17 4.94
2274 2722 0.804933 GCCGACGAGATGGTGGTAAC 60.805 60.000 0.00 0.00 0.00 2.50
2275 2723 0.968901 AGCCGACGAGATGGTGGTAA 60.969 55.000 0.00 0.00 0.00 2.85
2276 2724 1.379443 AGCCGACGAGATGGTGGTA 60.379 57.895 0.00 0.00 0.00 3.25
2277 2725 2.680352 AGCCGACGAGATGGTGGT 60.680 61.111 0.00 0.00 0.00 4.16
2278 2726 2.202797 CAGCCGACGAGATGGTGG 60.203 66.667 0.00 0.00 0.00 4.61
2279 2727 2.887568 GCAGCCGACGAGATGGTG 60.888 66.667 0.00 0.00 0.00 4.17
2280 2728 3.069980 GAGCAGCCGACGAGATGGT 62.070 63.158 0.00 0.70 0.00 3.55
2281 2729 2.279120 GAGCAGCCGACGAGATGG 60.279 66.667 0.00 0.00 0.00 3.51
2282 2730 0.529337 AATGAGCAGCCGACGAGATG 60.529 55.000 0.00 0.00 0.00 2.90
2283 2731 0.249238 GAATGAGCAGCCGACGAGAT 60.249 55.000 0.00 0.00 0.00 2.75
2284 2732 1.139734 GAATGAGCAGCCGACGAGA 59.860 57.895 0.00 0.00 0.00 4.04
2285 2733 0.869454 GAGAATGAGCAGCCGACGAG 60.869 60.000 0.00 0.00 0.00 4.18
2286 2734 1.139734 GAGAATGAGCAGCCGACGA 59.860 57.895 0.00 0.00 0.00 4.20
2287 2735 1.880340 GGAGAATGAGCAGCCGACG 60.880 63.158 0.00 0.00 0.00 5.12
2288 2736 1.522580 GGGAGAATGAGCAGCCGAC 60.523 63.158 0.00 0.00 0.00 4.79
2289 2737 2.903357 GGGAGAATGAGCAGCCGA 59.097 61.111 0.00 0.00 0.00 5.54
2290 2738 2.587194 CGGGAGAATGAGCAGCCG 60.587 66.667 0.00 0.00 0.00 5.52
2291 2739 2.899339 GCGGGAGAATGAGCAGCC 60.899 66.667 0.00 0.00 0.00 4.85
2292 2740 2.899339 GGCGGGAGAATGAGCAGC 60.899 66.667 0.00 0.00 0.00 5.25
2293 2741 1.523258 CTGGCGGGAGAATGAGCAG 60.523 63.158 0.00 0.00 0.00 4.24
2294 2742 2.586245 CTGGCGGGAGAATGAGCA 59.414 61.111 0.00 0.00 0.00 4.26
2295 2743 2.032860 TAGCTGGCGGGAGAATGAGC 62.033 60.000 0.00 0.00 0.00 4.26
2296 2744 0.683973 ATAGCTGGCGGGAGAATGAG 59.316 55.000 0.00 0.00 0.00 2.90
2297 2745 0.394192 CATAGCTGGCGGGAGAATGA 59.606 55.000 0.00 0.00 0.00 2.57
2298 2746 0.604780 CCATAGCTGGCGGGAGAATG 60.605 60.000 0.00 0.00 35.23 2.67
2299 2747 1.757306 CCATAGCTGGCGGGAGAAT 59.243 57.895 0.00 0.00 35.23 2.40
2300 2748 3.230284 CCATAGCTGGCGGGAGAA 58.770 61.111 0.00 0.00 35.23 2.87
2309 2757 3.914426 AAGGACTTGGTACCATAGCTG 57.086 47.619 17.17 6.62 0.00 4.24
2310 2758 3.200165 GGAAAGGACTTGGTACCATAGCT 59.800 47.826 17.17 6.87 0.00 3.32
2311 2759 3.200165 AGGAAAGGACTTGGTACCATAGC 59.800 47.826 17.17 7.62 0.00 2.97
2312 2760 4.384208 CCAGGAAAGGACTTGGTACCATAG 60.384 50.000 17.17 17.35 33.28 2.23
2313 2761 3.521937 CCAGGAAAGGACTTGGTACCATA 59.478 47.826 17.17 6.02 33.28 2.74
2314 2762 2.308866 CCAGGAAAGGACTTGGTACCAT 59.691 50.000 17.17 0.30 33.28 3.55
2315 2763 1.702957 CCAGGAAAGGACTTGGTACCA 59.297 52.381 11.60 11.60 33.28 3.25
2316 2764 1.703513 ACCAGGAAAGGACTTGGTACC 59.296 52.381 4.43 4.43 45.92 3.34
2317 2765 3.072622 AGAACCAGGAAAGGACTTGGTAC 59.927 47.826 0.00 0.00 46.80 3.34
2318 2766 3.072476 CAGAACCAGGAAAGGACTTGGTA 59.928 47.826 0.00 0.00 46.80 3.25
2320 2768 2.106511 TCAGAACCAGGAAAGGACTTGG 59.893 50.000 0.00 0.00 41.76 3.61
2321 2769 3.492102 TCAGAACCAGGAAAGGACTTG 57.508 47.619 0.00 0.00 0.00 3.16
2322 2770 3.913163 AGATCAGAACCAGGAAAGGACTT 59.087 43.478 0.00 0.00 0.00 3.01
2323 2771 3.525862 AGATCAGAACCAGGAAAGGACT 58.474 45.455 0.00 0.00 0.00 3.85
2324 2772 3.990959 AGATCAGAACCAGGAAAGGAC 57.009 47.619 0.00 0.00 0.00 3.85
2325 2773 4.467795 CAGTAGATCAGAACCAGGAAAGGA 59.532 45.833 0.00 0.00 0.00 3.36
2326 2774 4.764172 CAGTAGATCAGAACCAGGAAAGG 58.236 47.826 0.00 0.00 0.00 3.11
2327 2775 4.081198 AGCAGTAGATCAGAACCAGGAAAG 60.081 45.833 0.00 0.00 0.00 2.62
2328 2776 3.840666 AGCAGTAGATCAGAACCAGGAAA 59.159 43.478 0.00 0.00 0.00 3.13
2329 2777 3.445008 AGCAGTAGATCAGAACCAGGAA 58.555 45.455 0.00 0.00 0.00 3.36
2330 2778 3.027412 GAGCAGTAGATCAGAACCAGGA 58.973 50.000 0.00 0.00 0.00 3.86
2331 2779 3.030291 AGAGCAGTAGATCAGAACCAGG 58.970 50.000 0.00 0.00 30.99 4.45
2332 2780 3.737663 GCAGAGCAGTAGATCAGAACCAG 60.738 52.174 0.00 0.00 30.99 4.00
2333 2781 2.167281 GCAGAGCAGTAGATCAGAACCA 59.833 50.000 0.00 0.00 30.99 3.67
2334 2782 2.482839 GGCAGAGCAGTAGATCAGAACC 60.483 54.545 0.00 0.00 30.99 3.62
2335 2783 2.797792 CGGCAGAGCAGTAGATCAGAAC 60.798 54.545 0.00 0.00 30.99 3.01
2336 2784 1.406898 CGGCAGAGCAGTAGATCAGAA 59.593 52.381 0.00 0.00 30.99 3.02
2337 2785 1.028130 CGGCAGAGCAGTAGATCAGA 58.972 55.000 0.00 0.00 30.99 3.27
2338 2786 0.597118 GCGGCAGAGCAGTAGATCAG 60.597 60.000 0.00 0.00 37.05 2.90
2339 2787 1.439228 GCGGCAGAGCAGTAGATCA 59.561 57.895 0.00 0.00 37.05 2.92
2340 2788 1.300542 GGCGGCAGAGCAGTAGATC 60.301 63.158 3.07 0.00 39.27 2.75
2341 2789 2.060383 TGGCGGCAGAGCAGTAGAT 61.060 57.895 7.97 0.00 39.27 1.98
2342 2790 2.679996 TGGCGGCAGAGCAGTAGA 60.680 61.111 7.97 0.00 39.27 2.59
2343 2791 2.510238 GTGGCGGCAGAGCAGTAG 60.510 66.667 13.91 0.00 39.27 2.57
2344 2792 3.310307 TGTGGCGGCAGAGCAGTA 61.310 61.111 13.91 0.00 39.27 2.74
2345 2793 4.996434 GTGTGGCGGCAGAGCAGT 62.996 66.667 13.91 0.00 39.27 4.40
2356 2804 4.722700 ATGGCGTCAGGGTGTGGC 62.723 66.667 0.00 0.00 0.00 5.01
2357 2805 2.747460 CATGGCGTCAGGGTGTGG 60.747 66.667 0.00 0.00 0.00 4.17
2358 2806 1.600636 AACATGGCGTCAGGGTGTG 60.601 57.895 6.63 0.00 0.00 3.82
2359 2807 1.600636 CAACATGGCGTCAGGGTGT 60.601 57.895 12.31 0.00 37.58 4.16
2360 2808 0.321210 TACAACATGGCGTCAGGGTG 60.321 55.000 19.44 19.44 46.63 4.61
2361 2809 0.321298 GTACAACATGGCGTCAGGGT 60.321 55.000 6.63 0.00 0.00 4.34
2362 2810 1.358725 CGTACAACATGGCGTCAGGG 61.359 60.000 6.63 0.00 0.00 4.45
2363 2811 0.389296 TCGTACAACATGGCGTCAGG 60.389 55.000 0.00 0.00 0.00 3.86
2364 2812 0.992072 CTCGTACAACATGGCGTCAG 59.008 55.000 0.00 0.00 0.00 3.51
2365 2813 0.315886 ACTCGTACAACATGGCGTCA 59.684 50.000 0.00 0.00 0.00 4.35
2366 2814 0.713883 CACTCGTACAACATGGCGTC 59.286 55.000 0.00 0.00 0.00 5.19
2367 2815 0.669318 CCACTCGTACAACATGGCGT 60.669 55.000 0.00 0.00 0.00 5.68
2368 2816 0.669318 ACCACTCGTACAACATGGCG 60.669 55.000 0.00 0.00 33.46 5.69
2369 2817 0.796312 CACCACTCGTACAACATGGC 59.204 55.000 0.00 0.00 33.46 4.40
2370 2818 1.001520 TCCACCACTCGTACAACATGG 59.998 52.381 0.00 0.00 36.46 3.66
2371 2819 2.448926 TCCACCACTCGTACAACATG 57.551 50.000 0.00 0.00 0.00 3.21
2372 2820 2.416836 CGATCCACCACTCGTACAACAT 60.417 50.000 0.00 0.00 0.00 2.71
2373 2821 1.068125 CGATCCACCACTCGTACAACA 60.068 52.381 0.00 0.00 0.00 3.33
2374 2822 1.200716 TCGATCCACCACTCGTACAAC 59.799 52.381 0.00 0.00 36.33 3.32
2375 2823 1.536940 TCGATCCACCACTCGTACAA 58.463 50.000 0.00 0.00 36.33 2.41
2376 2824 1.404035 CATCGATCCACCACTCGTACA 59.596 52.381 0.00 0.00 36.33 2.90
2377 2825 1.864435 GCATCGATCCACCACTCGTAC 60.864 57.143 0.00 0.00 36.33 3.67
2378 2826 0.384309 GCATCGATCCACCACTCGTA 59.616 55.000 0.00 0.00 36.33 3.43
2379 2827 1.141881 GCATCGATCCACCACTCGT 59.858 57.895 0.00 0.00 36.33 4.18
2380 2828 1.592669 GGCATCGATCCACCACTCG 60.593 63.158 0.00 0.00 36.25 4.18
2381 2829 0.531532 CAGGCATCGATCCACCACTC 60.532 60.000 13.95 0.00 0.00 3.51
2382 2830 1.524002 CAGGCATCGATCCACCACT 59.476 57.895 13.95 0.00 0.00 4.00
2383 2831 2.182842 GCAGGCATCGATCCACCAC 61.183 63.158 13.95 2.61 0.00 4.16
2384 2832 2.190313 GCAGGCATCGATCCACCA 59.810 61.111 13.95 0.00 0.00 4.17
2385 2833 1.596477 GAGCAGGCATCGATCCACC 60.596 63.158 13.95 8.21 0.00 4.61
2386 2834 1.953138 CGAGCAGGCATCGATCCAC 60.953 63.158 13.95 7.40 42.76 4.02
2387 2835 2.418777 CGAGCAGGCATCGATCCA 59.581 61.111 13.95 0.00 42.76 3.41
2388 2836 2.356793 CCGAGCAGGCATCGATCC 60.357 66.667 0.00 0.00 42.76 3.36
2405 2853 3.291101 TACACGAGGAAGGCACCGC 62.291 63.158 0.00 0.00 34.73 5.68
2406 2854 1.153823 CTACACGAGGAAGGCACCG 60.154 63.158 0.00 0.00 34.73 4.94
2407 2855 0.606604 TTCTACACGAGGAAGGCACC 59.393 55.000 0.00 0.00 0.00 5.01
2408 2856 2.450609 TTTCTACACGAGGAAGGCAC 57.549 50.000 0.00 0.00 0.00 5.01
2409 2857 2.289444 CCTTTTCTACACGAGGAAGGCA 60.289 50.000 0.00 0.00 34.33 4.75
2410 2858 2.028385 TCCTTTTCTACACGAGGAAGGC 60.028 50.000 0.00 0.00 38.12 4.35
2411 2859 3.258622 AGTCCTTTTCTACACGAGGAAGG 59.741 47.826 0.00 0.00 39.83 3.46
2412 2860 4.522722 AGTCCTTTTCTACACGAGGAAG 57.477 45.455 0.00 0.00 39.83 3.46
2413 2861 4.082354 GCTAGTCCTTTTCTACACGAGGAA 60.082 45.833 0.00 0.00 39.83 3.36
2414 2862 3.442977 GCTAGTCCTTTTCTACACGAGGA 59.557 47.826 0.00 0.00 36.00 3.71
2415 2863 3.192844 TGCTAGTCCTTTTCTACACGAGG 59.807 47.826 0.00 0.00 0.00 4.63
2416 2864 4.436242 TGCTAGTCCTTTTCTACACGAG 57.564 45.455 0.00 0.00 0.00 4.18
2417 2865 4.142227 GGATGCTAGTCCTTTTCTACACGA 60.142 45.833 0.00 0.00 35.32 4.35
2418 2866 4.113354 GGATGCTAGTCCTTTTCTACACG 58.887 47.826 0.00 0.00 35.32 4.49
2419 2867 5.346181 AGGATGCTAGTCCTTTTCTACAC 57.654 43.478 0.00 0.00 46.45 2.90
2435 2883 0.034670 ACCAAGAGGAGCAAGGATGC 60.035 55.000 0.00 0.00 45.46 3.91
2436 2884 2.089980 CAACCAAGAGGAGCAAGGATG 58.910 52.381 0.00 0.00 38.69 3.51
2437 2885 1.615384 GCAACCAAGAGGAGCAAGGAT 60.615 52.381 0.00 0.00 38.64 3.24
2438 2886 0.250901 GCAACCAAGAGGAGCAAGGA 60.251 55.000 0.00 0.00 38.64 3.36
2439 2887 0.538057 TGCAACCAAGAGGAGCAAGG 60.538 55.000 0.00 0.00 43.00 3.61
2440 2888 1.201647 CATGCAACCAAGAGGAGCAAG 59.798 52.381 9.56 3.52 46.51 4.01
2441 2889 1.250328 CATGCAACCAAGAGGAGCAA 58.750 50.000 9.56 0.00 46.51 3.91
2443 2891 1.941999 GCCATGCAACCAAGAGGAGC 61.942 60.000 0.00 0.00 39.03 4.70
2444 2892 0.609957 TGCCATGCAACCAAGAGGAG 60.610 55.000 0.00 0.00 34.76 3.69
2445 2893 0.895100 GTGCCATGCAACCAAGAGGA 60.895 55.000 0.00 0.00 41.47 3.71
2446 2894 1.588082 GTGCCATGCAACCAAGAGG 59.412 57.895 0.00 0.00 41.47 3.69
2447 2895 1.588082 GGTGCCATGCAACCAAGAG 59.412 57.895 9.53 0.00 40.86 2.85
2448 2896 3.776158 GGTGCCATGCAACCAAGA 58.224 55.556 9.53 0.00 40.86 3.02
2454 2902 0.178967 TTTCCAGAGGTGCCATGCAA 60.179 50.000 0.00 0.00 41.47 4.08
2455 2903 0.609957 CTTTCCAGAGGTGCCATGCA 60.610 55.000 0.00 0.00 35.60 3.96
2456 2904 1.941999 GCTTTCCAGAGGTGCCATGC 61.942 60.000 0.00 0.00 0.00 4.06
2457 2905 0.609957 TGCTTTCCAGAGGTGCCATG 60.610 55.000 0.00 0.00 0.00 3.66
2458 2906 0.610232 GTGCTTTCCAGAGGTGCCAT 60.610 55.000 0.00 0.00 0.00 4.40
2459 2907 1.228245 GTGCTTTCCAGAGGTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
2460 2908 1.973812 GGTGCTTTCCAGAGGTGCC 60.974 63.158 0.00 0.00 0.00 5.01
2461 2909 2.328099 CGGTGCTTTCCAGAGGTGC 61.328 63.158 0.00 0.00 0.00 5.01
2462 2910 1.672356 CCGGTGCTTTCCAGAGGTG 60.672 63.158 0.00 0.00 0.00 4.00
2463 2911 1.415672 TTCCGGTGCTTTCCAGAGGT 61.416 55.000 0.00 0.00 0.00 3.85
2464 2912 0.955919 GTTCCGGTGCTTTCCAGAGG 60.956 60.000 0.00 0.00 0.00 3.69
2465 2913 1.291877 CGTTCCGGTGCTTTCCAGAG 61.292 60.000 0.00 0.00 0.00 3.35
2466 2914 1.301401 CGTTCCGGTGCTTTCCAGA 60.301 57.895 0.00 0.00 0.00 3.86
2467 2915 2.325082 CCGTTCCGGTGCTTTCCAG 61.325 63.158 0.00 0.00 42.73 3.86
2468 2916 2.281208 CCGTTCCGGTGCTTTCCA 60.281 61.111 0.00 0.00 42.73 3.53
2478 2926 1.083015 CGAAAACACAGCCGTTCCG 60.083 57.895 0.00 0.00 0.00 4.30
2479 2927 0.872388 ATCGAAAACACAGCCGTTCC 59.128 50.000 0.00 0.00 0.00 3.62
2480 2928 1.399727 CCATCGAAAACACAGCCGTTC 60.400 52.381 0.00 0.00 0.00 3.95
2481 2929 0.591170 CCATCGAAAACACAGCCGTT 59.409 50.000 0.00 0.00 0.00 4.44
2482 2930 1.852067 GCCATCGAAAACACAGCCGT 61.852 55.000 0.00 0.00 0.00 5.68
2483 2931 1.154225 GCCATCGAAAACACAGCCG 60.154 57.895 0.00 0.00 0.00 5.52
2484 2932 0.598065 AAGCCATCGAAAACACAGCC 59.402 50.000 0.00 0.00 0.00 4.85
2485 2933 1.689959 CAAGCCATCGAAAACACAGC 58.310 50.000 0.00 0.00 0.00 4.40
2486 2934 1.001487 TGCAAGCCATCGAAAACACAG 60.001 47.619 0.00 0.00 0.00 3.66
2487 2935 1.001487 CTGCAAGCCATCGAAAACACA 60.001 47.619 0.00 0.00 0.00 3.72
2488 2936 1.001378 ACTGCAAGCCATCGAAAACAC 60.001 47.619 0.00 0.00 37.60 3.32
2489 2937 1.266718 GACTGCAAGCCATCGAAAACA 59.733 47.619 0.00 0.00 37.60 2.83
2490 2938 1.401539 GGACTGCAAGCCATCGAAAAC 60.402 52.381 0.00 0.00 37.60 2.43
2491 2939 0.881118 GGACTGCAAGCCATCGAAAA 59.119 50.000 0.00 0.00 37.60 2.29
2492 2940 0.036732 AGGACTGCAAGCCATCGAAA 59.963 50.000 7.21 0.00 37.60 3.46
2493 2941 0.391661 GAGGACTGCAAGCCATCGAA 60.392 55.000 7.21 0.00 37.60 3.71
2494 2942 1.219124 GAGGACTGCAAGCCATCGA 59.781 57.895 7.21 0.00 37.60 3.59
2495 2943 1.817099 GGAGGACTGCAAGCCATCG 60.817 63.158 7.21 0.00 37.60 3.84
2496 2944 0.106819 ATGGAGGACTGCAAGCCATC 60.107 55.000 7.21 0.00 37.60 3.51
2497 2945 1.133976 GTATGGAGGACTGCAAGCCAT 60.134 52.381 7.21 8.48 41.81 4.40
2498 2946 0.253044 GTATGGAGGACTGCAAGCCA 59.747 55.000 7.21 1.81 37.60 4.75
2499 2947 0.253044 TGTATGGAGGACTGCAAGCC 59.747 55.000 0.00 0.00 37.60 4.35
2500 2948 1.373570 GTGTATGGAGGACTGCAAGC 58.626 55.000 0.00 0.00 37.60 4.01
2501 2949 1.066858 ACGTGTATGGAGGACTGCAAG 60.067 52.381 0.00 0.00 42.29 4.01
2502 2950 0.973632 ACGTGTATGGAGGACTGCAA 59.026 50.000 0.00 0.00 33.77 4.08
2503 2951 0.530744 GACGTGTATGGAGGACTGCA 59.469 55.000 0.00 0.00 34.81 4.41
2504 2952 0.179108 GGACGTGTATGGAGGACTGC 60.179 60.000 0.00 0.00 0.00 4.40
2505 2953 1.475403 AGGACGTGTATGGAGGACTG 58.525 55.000 0.00 0.00 0.00 3.51
2506 2954 2.241685 AGTAGGACGTGTATGGAGGACT 59.758 50.000 0.00 0.00 0.00 3.85
2507 2955 2.652590 AGTAGGACGTGTATGGAGGAC 58.347 52.381 0.00 0.00 0.00 3.85
2508 2956 3.285484 GAAGTAGGACGTGTATGGAGGA 58.715 50.000 0.00 0.00 0.00 3.71
2509 2957 3.021695 TGAAGTAGGACGTGTATGGAGG 58.978 50.000 0.00 0.00 0.00 4.30
2510 2958 3.489398 GCTGAAGTAGGACGTGTATGGAG 60.489 52.174 0.00 0.00 0.00 3.86
2511 2959 2.426024 GCTGAAGTAGGACGTGTATGGA 59.574 50.000 0.00 0.00 0.00 3.41
2512 2960 2.427453 AGCTGAAGTAGGACGTGTATGG 59.573 50.000 0.00 0.00 0.00 2.74
2513 2961 3.128764 TGAGCTGAAGTAGGACGTGTATG 59.871 47.826 0.00 0.00 0.00 2.39
2514 2962 3.353557 TGAGCTGAAGTAGGACGTGTAT 58.646 45.455 0.00 0.00 0.00 2.29
2515 2963 2.786777 TGAGCTGAAGTAGGACGTGTA 58.213 47.619 0.00 0.00 0.00 2.90
2516 2964 1.617322 TGAGCTGAAGTAGGACGTGT 58.383 50.000 0.00 0.00 0.00 4.49
2517 2965 2.164422 TGATGAGCTGAAGTAGGACGTG 59.836 50.000 0.00 0.00 0.00 4.49
2518 2966 2.447443 TGATGAGCTGAAGTAGGACGT 58.553 47.619 0.00 0.00 0.00 4.34
2519 2967 3.129462 TCTTGATGAGCTGAAGTAGGACG 59.871 47.826 0.00 0.00 0.00 4.79
2520 2968 4.727507 TCTTGATGAGCTGAAGTAGGAC 57.272 45.455 0.00 0.00 0.00 3.85
2521 2969 4.380973 CGTTCTTGATGAGCTGAAGTAGGA 60.381 45.833 0.00 0.00 0.00 2.94
2522 2970 3.862267 CGTTCTTGATGAGCTGAAGTAGG 59.138 47.826 0.00 0.00 0.00 3.18
2523 2971 4.738124 TCGTTCTTGATGAGCTGAAGTAG 58.262 43.478 0.00 0.00 0.00 2.57
2524 2972 4.783764 TCGTTCTTGATGAGCTGAAGTA 57.216 40.909 0.00 0.00 0.00 2.24
2525 2973 3.667497 TCGTTCTTGATGAGCTGAAGT 57.333 42.857 0.00 0.00 0.00 3.01
2526 2974 3.242349 GCATCGTTCTTGATGAGCTGAAG 60.242 47.826 7.86 0.00 46.98 3.02
2527 2975 2.674852 GCATCGTTCTTGATGAGCTGAA 59.325 45.455 7.86 0.00 46.98 3.02
2528 2976 2.093816 AGCATCGTTCTTGATGAGCTGA 60.094 45.455 7.86 0.00 46.98 4.26
2529 2977 2.277969 AGCATCGTTCTTGATGAGCTG 58.722 47.619 7.86 0.00 46.98 4.24
2530 2978 2.548875 GAGCATCGTTCTTGATGAGCT 58.451 47.619 7.86 0.00 46.98 4.09
2544 2992 1.009829 CTGTACCAAAGGCGAGCATC 58.990 55.000 0.00 0.00 0.00 3.91
2545 2993 0.392998 CCTGTACCAAAGGCGAGCAT 60.393 55.000 0.00 0.00 0.00 3.79
2546 2994 1.003839 CCTGTACCAAAGGCGAGCA 60.004 57.895 0.00 0.00 0.00 4.26
2547 2995 1.745489 CCCTGTACCAAAGGCGAGC 60.745 63.158 0.00 0.00 33.07 5.03
2548 2996 1.078426 CCCCTGTACCAAAGGCGAG 60.078 63.158 0.00 0.00 33.07 5.03
2549 2997 1.844289 ACCCCTGTACCAAAGGCGA 60.844 57.895 0.00 0.00 33.07 5.54
2550 2998 1.674322 CACCCCTGTACCAAAGGCG 60.674 63.158 0.00 0.00 33.07 5.52
2551 2999 1.304134 CCACCCCTGTACCAAAGGC 60.304 63.158 0.00 0.00 33.07 4.35
2552 3000 1.304134 GCCACCCCTGTACCAAAGG 60.304 63.158 0.00 0.00 34.31 3.11
2553 3001 1.674322 CGCCACCCCTGTACCAAAG 60.674 63.158 0.00 0.00 0.00 2.77
2554 3002 2.432563 CGCCACCCCTGTACCAAA 59.567 61.111 0.00 0.00 0.00 3.28
2555 3003 4.338710 GCGCCACCCCTGTACCAA 62.339 66.667 0.00 0.00 0.00 3.67
2565 3013 4.481112 CAATCCAAGCGCGCCACC 62.481 66.667 30.33 0.00 0.00 4.61
2566 3014 4.481112 CCAATCCAAGCGCGCCAC 62.481 66.667 30.33 0.00 0.00 5.01
2567 3015 4.713735 TCCAATCCAAGCGCGCCA 62.714 61.111 30.33 10.10 0.00 5.69
2568 3016 4.179579 GTCCAATCCAAGCGCGCC 62.180 66.667 30.33 10.31 0.00 6.53
2569 3017 2.976840 TTGTCCAATCCAAGCGCGC 61.977 57.895 26.66 26.66 0.00 6.86
2570 3018 1.154225 GTTGTCCAATCCAAGCGCG 60.154 57.895 0.00 0.00 0.00 6.86
2571 3019 0.598065 AAGTTGTCCAATCCAAGCGC 59.402 50.000 0.00 0.00 0.00 5.92
2572 3020 2.554032 AGAAAGTTGTCCAATCCAAGCG 59.446 45.455 0.00 0.00 0.00 4.68
2573 3021 4.550422 GAAGAAAGTTGTCCAATCCAAGC 58.450 43.478 0.00 0.00 0.00 4.01
2574 3022 4.021981 GGGAAGAAAGTTGTCCAATCCAAG 60.022 45.833 3.62 0.00 32.70 3.61
2575 3023 3.895041 GGGAAGAAAGTTGTCCAATCCAA 59.105 43.478 3.62 0.00 32.70 3.53
2576 3024 3.496331 GGGAAGAAAGTTGTCCAATCCA 58.504 45.455 3.62 0.00 32.70 3.41
2577 3025 2.488153 CGGGAAGAAAGTTGTCCAATCC 59.512 50.000 3.62 0.00 32.70 3.01
2578 3026 3.408634 TCGGGAAGAAAGTTGTCCAATC 58.591 45.455 3.62 0.00 32.70 2.67
2579 3027 3.181443 ACTCGGGAAGAAAGTTGTCCAAT 60.181 43.478 0.00 0.00 32.70 3.16
2580 3028 2.171870 ACTCGGGAAGAAAGTTGTCCAA 59.828 45.455 0.00 0.00 32.70 3.53
2581 3029 1.766496 ACTCGGGAAGAAAGTTGTCCA 59.234 47.619 0.00 0.00 32.70 4.02
2582 3030 2.545537 ACTCGGGAAGAAAGTTGTCC 57.454 50.000 0.00 0.00 0.00 4.02
2583 3031 2.994578 GCTACTCGGGAAGAAAGTTGTC 59.005 50.000 0.00 0.00 0.00 3.18
2584 3032 2.289506 GGCTACTCGGGAAGAAAGTTGT 60.290 50.000 0.00 0.00 0.00 3.32
2585 3033 2.347731 GGCTACTCGGGAAGAAAGTTG 58.652 52.381 0.00 0.00 0.00 3.16
2586 3034 1.278413 GGGCTACTCGGGAAGAAAGTT 59.722 52.381 0.00 0.00 0.00 2.66
2587 3035 0.903236 GGGCTACTCGGGAAGAAAGT 59.097 55.000 0.00 0.00 0.00 2.66
2588 3036 0.178301 GGGGCTACTCGGGAAGAAAG 59.822 60.000 0.00 0.00 0.00 2.62
2589 3037 1.269703 GGGGGCTACTCGGGAAGAAA 61.270 60.000 0.00 0.00 0.00 2.52
2590 3038 1.688187 GGGGGCTACTCGGGAAGAA 60.688 63.158 0.00 0.00 0.00 2.52
2591 3039 2.042230 GGGGGCTACTCGGGAAGA 60.042 66.667 0.00 0.00 0.00 2.87
2592 3040 1.766461 ATGGGGGCTACTCGGGAAG 60.766 63.158 0.00 0.00 0.00 3.46
2593 3041 2.070039 CATGGGGGCTACTCGGGAA 61.070 63.158 0.00 0.00 0.00 3.97
2594 3042 2.445845 CATGGGGGCTACTCGGGA 60.446 66.667 0.00 0.00 0.00 5.14
2595 3043 2.768344 ACATGGGGGCTACTCGGG 60.768 66.667 0.00 0.00 0.00 5.14
2596 3044 2.505982 CACATGGGGGCTACTCGG 59.494 66.667 0.00 0.00 0.00 4.63
2597 3045 2.203070 GCACATGGGGGCTACTCG 60.203 66.667 0.00 0.00 0.00 4.18
2598 3046 2.193248 GGCACATGGGGGCTACTC 59.807 66.667 0.00 0.00 0.00 2.59
2599 3047 2.613696 TGGCACATGGGGGCTACT 60.614 61.111 13.07 0.00 0.00 2.57
2611 3059 3.347216 AGAAGTTACATCCACATGGCAC 58.653 45.455 0.00 0.00 33.82 5.01
2612 3060 3.719268 AGAAGTTACATCCACATGGCA 57.281 42.857 0.00 0.00 33.82 4.92
2613 3061 5.126067 ACATAGAAGTTACATCCACATGGC 58.874 41.667 0.00 0.00 33.82 4.40
2614 3062 8.370940 AGATACATAGAAGTTACATCCACATGG 58.629 37.037 0.00 0.00 33.82 3.66
2641 3089 8.077991 CCGCAAAGTTATGTATCATTCATTGAT 58.922 33.333 0.00 0.00 46.86 2.57
2642 3090 7.281999 TCCGCAAAGTTATGTATCATTCATTGA 59.718 33.333 0.00 0.00 39.12 2.57
2643 3091 7.416817 TCCGCAAAGTTATGTATCATTCATTG 58.583 34.615 0.00 0.00 0.00 2.82
2644 3092 7.566760 TCCGCAAAGTTATGTATCATTCATT 57.433 32.000 0.00 0.00 0.00 2.57
2645 3093 7.750229 ATCCGCAAAGTTATGTATCATTCAT 57.250 32.000 0.00 0.00 0.00 2.57
2646 3094 7.498900 AGAATCCGCAAAGTTATGTATCATTCA 59.501 33.333 0.00 0.00 0.00 2.57
2647 3095 7.865707 AGAATCCGCAAAGTTATGTATCATTC 58.134 34.615 0.00 0.00 0.00 2.67
2648 3096 7.807977 AGAATCCGCAAAGTTATGTATCATT 57.192 32.000 0.00 0.00 0.00 2.57
2649 3097 7.498900 TCAAGAATCCGCAAAGTTATGTATCAT 59.501 33.333 0.00 0.00 0.00 2.45
2650 3098 6.821160 TCAAGAATCCGCAAAGTTATGTATCA 59.179 34.615 0.00 0.00 0.00 2.15
2651 3099 7.246674 TCAAGAATCCGCAAAGTTATGTATC 57.753 36.000 0.00 0.00 0.00 2.24
2652 3100 7.624360 TTCAAGAATCCGCAAAGTTATGTAT 57.376 32.000 0.00 0.00 0.00 2.29
2653 3101 7.441890 TTTCAAGAATCCGCAAAGTTATGTA 57.558 32.000 0.00 0.00 0.00 2.29
2654 3102 5.957842 TTCAAGAATCCGCAAAGTTATGT 57.042 34.783 0.00 0.00 0.00 2.29
2655 3103 7.636259 TTTTTCAAGAATCCGCAAAGTTATG 57.364 32.000 0.00 0.00 0.00 1.90
2677 3125 3.642848 TGGGCTTGCTTCTGAAGATTTTT 59.357 39.130 21.06 0.00 0.00 1.94
2678 3126 3.006217 GTGGGCTTGCTTCTGAAGATTTT 59.994 43.478 21.06 0.00 0.00 1.82
2702 3150 2.526304 TGAGCATACGATGTAAGCCC 57.474 50.000 0.00 0.00 0.00 5.19
2729 3178 5.677567 TGATTGAGCTGATCACACATACAT 58.322 37.500 0.00 0.00 37.77 2.29
2731 3180 6.128200 TGTTTGATTGAGCTGATCACACATAC 60.128 38.462 17.99 5.36 38.55 2.39
2735 3184 4.754372 TGTTTGATTGAGCTGATCACAC 57.246 40.909 14.59 14.59 37.77 3.82
2786 4152 4.623932 ATCAGTTCAGGAGCTTGTGTTA 57.376 40.909 0.00 0.00 0.00 2.41
2822 4189 7.262772 TGAAGTAGTAGTCCAATATTTCCACG 58.737 38.462 0.00 0.00 0.00 4.94
2844 4211 8.629158 CGGGTGATATAATGGAAGAAAAATGAA 58.371 33.333 0.00 0.00 0.00 2.57
2845 4212 7.777910 ACGGGTGATATAATGGAAGAAAAATGA 59.222 33.333 0.00 0.00 0.00 2.57
2846 4213 7.940850 ACGGGTGATATAATGGAAGAAAAATG 58.059 34.615 0.00 0.00 0.00 2.32
2857 4227 6.590292 GGTGAGACATTACGGGTGATATAATG 59.410 42.308 0.00 0.00 40.57 1.90
2967 4339 1.356059 AGAGGAGTAGGTGAGCACTGA 59.644 52.381 0.16 0.00 0.00 3.41
2968 4340 1.846007 AGAGGAGTAGGTGAGCACTG 58.154 55.000 0.16 0.00 0.00 3.66
2969 4341 2.614134 AAGAGGAGTAGGTGAGCACT 57.386 50.000 0.16 0.00 0.00 4.40
2970 4342 2.563179 TGAAAGAGGAGTAGGTGAGCAC 59.437 50.000 0.00 0.00 0.00 4.40
2971 4343 2.889512 TGAAAGAGGAGTAGGTGAGCA 58.110 47.619 0.00 0.00 0.00 4.26
2972 4344 3.963428 TTGAAAGAGGAGTAGGTGAGC 57.037 47.619 0.00 0.00 0.00 4.26
2973 4345 4.826556 CCTTTGAAAGAGGAGTAGGTGAG 58.173 47.826 6.49 0.00 36.33 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.