Multiple sequence alignment - TraesCS6A01G325100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G325100 chr6A 100.000 8545 0 0 1 8545 558968985 558960441 0.000000e+00 15780.0
1 TraesCS6A01G325100 chr6B 97.268 4429 85 9 1582 5984 623696306 623691888 0.000000e+00 7476.0
2 TraesCS6A01G325100 chr6B 94.383 2083 58 22 5980 8022 623691811 623689748 0.000000e+00 3144.0
3 TraesCS6A01G325100 chr6B 88.839 896 47 21 686 1553 623697176 623696306 0.000000e+00 1051.0
4 TraesCS6A01G325100 chr6B 89.097 321 12 6 8229 8542 623689750 623689446 2.250000e-100 377.0
5 TraesCS6A01G325100 chr6B 90.805 261 17 7 2044 2301 713863207 713863463 8.210000e-90 342.0
6 TraesCS6A01G325100 chr6B 90.873 252 19 4 2051 2301 713309652 713309900 1.370000e-87 335.0
7 TraesCS6A01G325100 chr6B 84.444 270 22 10 810 1064 623698174 623697910 1.840000e-61 248.0
8 TraesCS6A01G325100 chr6D 96.918 4445 97 15 3321 7748 413978054 413973633 0.000000e+00 7413.0
9 TraesCS6A01G325100 chr6D 92.911 3047 127 44 292 3282 413981066 413978053 0.000000e+00 4348.0
10 TraesCS6A01G325100 chr6D 85.067 375 50 3 1932 2306 11142327 11141959 2.250000e-100 377.0
11 TraesCS6A01G325100 chr7B 79.934 304 50 8 5458 5755 81425844 81425546 6.720000e-51 213.0
12 TraesCS6A01G325100 chr7B 75.314 239 28 15 130 352 84644919 84645142 1.530000e-12 86.1
13 TraesCS6A01G325100 chr7A 79.276 304 52 9 5458 5755 124793735 124793437 1.450000e-47 202.0
14 TraesCS6A01G325100 chr7A 94.805 77 4 0 6119 6195 458680604 458680680 4.190000e-23 121.0
15 TraesCS6A01G325100 chr7D 87.283 173 22 0 5458 5630 119895043 119894871 1.880000e-46 198.0
16 TraesCS6A01G325100 chr7D 87.037 162 17 3 6607 6768 334882602 334882759 6.810000e-41 180.0
17 TraesCS6A01G325100 chr7D 81.752 137 19 5 283 416 543632146 543632279 9.070000e-20 110.0
18 TraesCS6A01G325100 chr3B 88.119 101 6 3 291 389 825826825 825826729 1.950000e-21 115.0
19 TraesCS6A01G325100 chr4B 81.618 136 16 8 290 419 664553027 664552895 4.220000e-18 104.0
20 TraesCS6A01G325100 chr2D 81.061 132 24 1 286 416 569154538 569154407 4.220000e-18 104.0
21 TraesCS6A01G325100 chr2D 80.469 128 20 1 283 410 344311820 344311942 9.130000e-15 93.5
22 TraesCS6A01G325100 chrUn 88.732 71 6 2 283 352 41344015 41344084 1.530000e-12 86.1
23 TraesCS6A01G325100 chrUn 88.732 71 6 2 283 352 191158646 191158715 1.530000e-12 86.1
24 TraesCS6A01G325100 chr1A 77.333 150 28 5 293 437 327539043 327538895 5.500000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G325100 chr6A 558960441 558968985 8544 True 15780.0 15780 100.0000 1 8545 1 chr6A.!!$R1 8544
1 TraesCS6A01G325100 chr6B 623689446 623698174 8728 True 2459.2 7476 90.8062 686 8542 5 chr6B.!!$R1 7856
2 TraesCS6A01G325100 chr6D 413973633 413981066 7433 True 5880.5 7413 94.9145 292 7748 2 chr6D.!!$R2 7456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
854 1178 1.671379 GAAAACGCTCCCCGCTCTT 60.671 57.895 0.00 0.0 41.76 2.85 F
1512 1874 0.597568 TTGGTTCCGCAGCATTTCTG 59.402 50.000 0.00 0.0 45.62 3.02 F
1696 2059 0.764890 TGCTTCAGTGTTGGCTAGGT 59.235 50.000 0.00 0.0 0.00 3.08 F
1698 2061 1.807142 GCTTCAGTGTTGGCTAGGTTC 59.193 52.381 0.00 0.0 0.00 3.62 F
3536 3922 1.246056 TGCTTGCTTGCTGGATGACC 61.246 55.000 3.47 0.0 0.00 4.02 F
3608 3994 1.060122 GAAGTCGTTTATTCCACCGCG 59.940 52.381 0.00 0.0 0.00 6.46 F
5456 5848 1.694696 CCCCTCCTATCTAACACAGCC 59.305 57.143 0.00 0.0 0.00 4.85 F
6799 7272 1.347707 CACAGCCAGGAACTCCAGTAA 59.652 52.381 0.00 0.0 34.60 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2262 2648 0.921896 ACCCACAGATAGGCAAGCAT 59.078 50.000 0.0 0.00 0.00 3.79 R
2447 2833 2.289072 CCAAGTTCTCCATGTCGTCTGT 60.289 50.000 0.0 0.00 0.00 3.41 R
3310 3696 2.516906 TGGCATGTCAATGAGCTCAAA 58.483 42.857 22.5 6.61 35.67 2.69 R
3608 3994 5.277047 CCTCGTCGGTACTAAATAACCTTC 58.723 45.833 0.0 0.00 33.34 3.46 R
5456 5848 0.321653 CTCCTCCAAACCTTCCACCG 60.322 60.000 0.0 0.00 0.00 4.94 R
5585 5977 0.534877 AATCAAGCTCCACACGCACA 60.535 50.000 0.0 0.00 0.00 4.57 R
6850 7323 1.202976 AGCATCACCAAAGCCAGTTCT 60.203 47.619 0.0 0.00 0.00 3.01 R
8453 8979 0.036105 TGCATCACGGACAGCTTCAT 60.036 50.000 0.0 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.390603 GCCGGTTTTTCACTTGTTCTTTTT 59.609 37.500 1.90 0.00 0.00 1.94
47 48 4.757019 AAATTTTTGGTTTACGTGGGGT 57.243 36.364 0.00 0.00 0.00 4.95
50 51 4.548451 TTTTTGGTTTACGTGGGGTTTT 57.452 36.364 0.00 0.00 0.00 2.43
53 54 3.015675 TGGTTTACGTGGGGTTTTCTT 57.984 42.857 0.00 0.00 0.00 2.52
54 55 3.363627 TGGTTTACGTGGGGTTTTCTTT 58.636 40.909 0.00 0.00 0.00 2.52
55 56 3.130693 TGGTTTACGTGGGGTTTTCTTTG 59.869 43.478 0.00 0.00 0.00 2.77
56 57 3.130869 GGTTTACGTGGGGTTTTCTTTGT 59.869 43.478 0.00 0.00 0.00 2.83
57 58 4.106909 GTTTACGTGGGGTTTTCTTTGTG 58.893 43.478 0.00 0.00 0.00 3.33
58 59 1.842052 ACGTGGGGTTTTCTTTGTGT 58.158 45.000 0.00 0.00 0.00 3.72
59 60 2.172679 ACGTGGGGTTTTCTTTGTGTT 58.827 42.857 0.00 0.00 0.00 3.32
60 61 2.563620 ACGTGGGGTTTTCTTTGTGTTT 59.436 40.909 0.00 0.00 0.00 2.83
61 62 3.007074 ACGTGGGGTTTTCTTTGTGTTTT 59.993 39.130 0.00 0.00 0.00 2.43
63 64 4.619628 CGTGGGGTTTTCTTTGTGTTTTCT 60.620 41.667 0.00 0.00 0.00 2.52
65 66 4.775253 TGGGGTTTTCTTTGTGTTTTCTCT 59.225 37.500 0.00 0.00 0.00 3.10
66 67 5.109210 GGGGTTTTCTTTGTGTTTTCTCTG 58.891 41.667 0.00 0.00 0.00 3.35
67 68 5.105513 GGGGTTTTCTTTGTGTTTTCTCTGA 60.106 40.000 0.00 0.00 0.00 3.27
68 69 6.406961 GGGGTTTTCTTTGTGTTTTCTCTGAT 60.407 38.462 0.00 0.00 0.00 2.90
69 70 7.041721 GGGTTTTCTTTGTGTTTTCTCTGATT 58.958 34.615 0.00 0.00 0.00 2.57
73 74 5.694995 TCTTTGTGTTTTCTCTGATTCCCT 58.305 37.500 0.00 0.00 0.00 4.20
74 75 6.837312 TCTTTGTGTTTTCTCTGATTCCCTA 58.163 36.000 0.00 0.00 0.00 3.53
76 77 6.433847 TTGTGTTTTCTCTGATTCCCTAGA 57.566 37.500 0.00 0.00 0.00 2.43
77 78 6.627087 TGTGTTTTCTCTGATTCCCTAGAT 57.373 37.500 0.00 0.00 0.00 1.98
78 79 7.020827 TGTGTTTTCTCTGATTCCCTAGATT 57.979 36.000 0.00 0.00 0.00 2.40
79 80 7.461749 TGTGTTTTCTCTGATTCCCTAGATTT 58.538 34.615 0.00 0.00 0.00 2.17
80 81 7.944554 TGTGTTTTCTCTGATTCCCTAGATTTT 59.055 33.333 0.00 0.00 0.00 1.82
82 83 8.386264 TGTTTTCTCTGATTCCCTAGATTTTCT 58.614 33.333 0.00 0.00 0.00 2.52
83 84 8.888716 GTTTTCTCTGATTCCCTAGATTTTCTC 58.111 37.037 0.00 0.00 0.00 2.87
84 85 7.986553 TTCTCTGATTCCCTAGATTTTCTCT 57.013 36.000 0.00 0.00 38.06 3.10
85 86 7.358770 TCTCTGATTCCCTAGATTTTCTCTG 57.641 40.000 0.00 0.00 35.28 3.35
86 87 6.900186 TCTCTGATTCCCTAGATTTTCTCTGT 59.100 38.462 0.00 0.00 35.28 3.41
87 88 7.401493 TCTCTGATTCCCTAGATTTTCTCTGTT 59.599 37.037 0.00 0.00 35.28 3.16
88 89 7.922382 TCTGATTCCCTAGATTTTCTCTGTTT 58.078 34.615 0.00 0.00 35.28 2.83
91 92 7.611855 TGATTCCCTAGATTTTCTCTGTTTTCC 59.388 37.037 0.00 0.00 35.28 3.13
92 93 6.704056 TCCCTAGATTTTCTCTGTTTTCCT 57.296 37.500 0.00 0.00 35.28 3.36
93 94 6.476378 TCCCTAGATTTTCTCTGTTTTCCTG 58.524 40.000 0.00 0.00 35.28 3.86
94 95 6.044404 TCCCTAGATTTTCTCTGTTTTCCTGT 59.956 38.462 0.00 0.00 35.28 4.00
95 96 6.717084 CCCTAGATTTTCTCTGTTTTCCTGTT 59.283 38.462 0.00 0.00 35.28 3.16
96 97 7.231519 CCCTAGATTTTCTCTGTTTTCCTGTTT 59.768 37.037 0.00 0.00 35.28 2.83
97 98 8.633561 CCTAGATTTTCTCTGTTTTCCTGTTTT 58.366 33.333 0.00 0.00 35.28 2.43
98 99 9.455847 CTAGATTTTCTCTGTTTTCCTGTTTTG 57.544 33.333 0.00 0.00 35.28 2.44
99 100 7.840931 AGATTTTCTCTGTTTTCCTGTTTTGT 58.159 30.769 0.00 0.00 31.12 2.83
102 103 5.576447 TCTCTGTTTTCCTGTTTTGTTCC 57.424 39.130 0.00 0.00 0.00 3.62
103 104 5.261216 TCTCTGTTTTCCTGTTTTGTTCCT 58.739 37.500 0.00 0.00 0.00 3.36
104 105 5.714806 TCTCTGTTTTCCTGTTTTGTTCCTT 59.285 36.000 0.00 0.00 0.00 3.36
106 107 6.394809 TCTGTTTTCCTGTTTTGTTCCTTTC 58.605 36.000 0.00 0.00 0.00 2.62
107 108 6.210584 TCTGTTTTCCTGTTTTGTTCCTTTCT 59.789 34.615 0.00 0.00 0.00 2.52
108 109 6.764379 TGTTTTCCTGTTTTGTTCCTTTCTT 58.236 32.000 0.00 0.00 0.00 2.52
109 110 6.648725 TGTTTTCCTGTTTTGTTCCTTTCTTG 59.351 34.615 0.00 0.00 0.00 3.02
110 111 6.597832 TTTCCTGTTTTGTTCCTTTCTTGA 57.402 33.333 0.00 0.00 0.00 3.02
111 112 6.790232 TTCCTGTTTTGTTCCTTTCTTGAT 57.210 33.333 0.00 0.00 0.00 2.57
113 114 7.181569 TCCTGTTTTGTTCCTTTCTTGATTT 57.818 32.000 0.00 0.00 0.00 2.17
114 115 7.619965 TCCTGTTTTGTTCCTTTCTTGATTTT 58.380 30.769 0.00 0.00 0.00 1.82
115 116 7.763985 TCCTGTTTTGTTCCTTTCTTGATTTTC 59.236 33.333 0.00 0.00 0.00 2.29
116 117 7.765819 CCTGTTTTGTTCCTTTCTTGATTTTCT 59.234 33.333 0.00 0.00 0.00 2.52
117 118 9.154847 CTGTTTTGTTCCTTTCTTGATTTTCTT 57.845 29.630 0.00 0.00 0.00 2.52
118 119 9.500785 TGTTTTGTTCCTTTCTTGATTTTCTTT 57.499 25.926 0.00 0.00 0.00 2.52
149 150 7.851387 TTCTTGGTTTTTATTGTTTTGTCCC 57.149 32.000 0.00 0.00 0.00 4.46
150 151 7.189079 TCTTGGTTTTTATTGTTTTGTCCCT 57.811 32.000 0.00 0.00 0.00 4.20
151 152 7.625469 TCTTGGTTTTTATTGTTTTGTCCCTT 58.375 30.769 0.00 0.00 0.00 3.95
154 155 7.569240 TGGTTTTTATTGTTTTGTCCCTTCAT 58.431 30.769 0.00 0.00 0.00 2.57
155 156 8.049721 TGGTTTTTATTGTTTTGTCCCTTCATT 58.950 29.630 0.00 0.00 0.00 2.57
156 157 8.898761 GGTTTTTATTGTTTTGTCCCTTCATTT 58.101 29.630 0.00 0.00 0.00 2.32
160 161 9.898152 TTTATTGTTTTGTCCCTTCATTTTTCT 57.102 25.926 0.00 0.00 0.00 2.52
163 164 6.039616 TGTTTTGTCCCTTCATTTTTCTTCG 58.960 36.000 0.00 0.00 0.00 3.79
164 165 4.846779 TTGTCCCTTCATTTTTCTTCGG 57.153 40.909 0.00 0.00 0.00 4.30
165 166 3.827722 TGTCCCTTCATTTTTCTTCGGT 58.172 40.909 0.00 0.00 0.00 4.69
166 167 3.818773 TGTCCCTTCATTTTTCTTCGGTC 59.181 43.478 0.00 0.00 0.00 4.79
167 168 3.818773 GTCCCTTCATTTTTCTTCGGTCA 59.181 43.478 0.00 0.00 0.00 4.02
168 169 4.459337 GTCCCTTCATTTTTCTTCGGTCAT 59.541 41.667 0.00 0.00 0.00 3.06
169 170 5.646360 GTCCCTTCATTTTTCTTCGGTCATA 59.354 40.000 0.00 0.00 0.00 2.15
170 171 6.318900 GTCCCTTCATTTTTCTTCGGTCATAT 59.681 38.462 0.00 0.00 0.00 1.78
171 172 6.889722 TCCCTTCATTTTTCTTCGGTCATATT 59.110 34.615 0.00 0.00 0.00 1.28
172 173 7.396055 TCCCTTCATTTTTCTTCGGTCATATTT 59.604 33.333 0.00 0.00 0.00 1.40
173 174 7.702348 CCCTTCATTTTTCTTCGGTCATATTTC 59.298 37.037 0.00 0.00 0.00 2.17
174 175 8.462016 CCTTCATTTTTCTTCGGTCATATTTCT 58.538 33.333 0.00 0.00 0.00 2.52
175 176 9.846248 CTTCATTTTTCTTCGGTCATATTTCTT 57.154 29.630 0.00 0.00 0.00 2.52
177 178 9.840427 TCATTTTTCTTCGGTCATATTTCTTTC 57.160 29.630 0.00 0.00 0.00 2.62
178 179 9.846248 CATTTTTCTTCGGTCATATTTCTTTCT 57.154 29.630 0.00 0.00 0.00 2.52
181 182 9.893305 TTTTCTTCGGTCATATTTCTTTCTTTC 57.107 29.630 0.00 0.00 0.00 2.62
182 183 8.848474 TTCTTCGGTCATATTTCTTTCTTTCT 57.152 30.769 0.00 0.00 0.00 2.52
183 184 8.848474 TCTTCGGTCATATTTCTTTCTTTCTT 57.152 30.769 0.00 0.00 0.00 2.52
184 185 8.721478 TCTTCGGTCATATTTCTTTCTTTCTTG 58.279 33.333 0.00 0.00 0.00 3.02
187 188 7.878127 TCGGTCATATTTCTTTCTTTCTTGTCT 59.122 33.333 0.00 0.00 0.00 3.41
188 189 8.507249 CGGTCATATTTCTTTCTTTCTTGTCTT 58.493 33.333 0.00 0.00 0.00 3.01
213 214 9.801873 TTTATCAGTTTCTTTGTTTTCTCTTGG 57.198 29.630 0.00 0.00 0.00 3.61
214 215 6.207691 TCAGTTTCTTTGTTTTCTCTTGGG 57.792 37.500 0.00 0.00 0.00 4.12
215 216 5.714806 TCAGTTTCTTTGTTTTCTCTTGGGT 59.285 36.000 0.00 0.00 0.00 4.51
216 217 6.210584 TCAGTTTCTTTGTTTTCTCTTGGGTT 59.789 34.615 0.00 0.00 0.00 4.11
218 219 4.385358 TCTTTGTTTTCTCTTGGGTTGC 57.615 40.909 0.00 0.00 0.00 4.17
219 220 3.766591 TCTTTGTTTTCTCTTGGGTTGCA 59.233 39.130 0.00 0.00 0.00 4.08
220 221 4.405358 TCTTTGTTTTCTCTTGGGTTGCAT 59.595 37.500 0.00 0.00 0.00 3.96
221 222 4.751767 TTGTTTTCTCTTGGGTTGCATT 57.248 36.364 0.00 0.00 0.00 3.56
222 223 4.057406 TGTTTTCTCTTGGGTTGCATTG 57.943 40.909 0.00 0.00 0.00 2.82
223 224 3.450457 TGTTTTCTCTTGGGTTGCATTGT 59.550 39.130 0.00 0.00 0.00 2.71
224 225 4.081198 TGTTTTCTCTTGGGTTGCATTGTT 60.081 37.500 0.00 0.00 0.00 2.83
225 226 4.751767 TTTCTCTTGGGTTGCATTGTTT 57.248 36.364 0.00 0.00 0.00 2.83
226 227 4.751767 TTCTCTTGGGTTGCATTGTTTT 57.248 36.364 0.00 0.00 0.00 2.43
227 228 4.751767 TCTCTTGGGTTGCATTGTTTTT 57.248 36.364 0.00 0.00 0.00 1.94
228 229 4.692228 TCTCTTGGGTTGCATTGTTTTTC 58.308 39.130 0.00 0.00 0.00 2.29
229 230 4.405358 TCTCTTGGGTTGCATTGTTTTTCT 59.595 37.500 0.00 0.00 0.00 2.52
231 232 6.267471 TCTCTTGGGTTGCATTGTTTTTCTAT 59.733 34.615 0.00 0.00 0.00 1.98
232 233 7.450014 TCTCTTGGGTTGCATTGTTTTTCTATA 59.550 33.333 0.00 0.00 0.00 1.31
233 234 7.375053 TCTTGGGTTGCATTGTTTTTCTATAC 58.625 34.615 0.00 0.00 0.00 1.47
234 235 6.656632 TGGGTTGCATTGTTTTTCTATACA 57.343 33.333 0.00 0.00 0.00 2.29
235 236 6.451393 TGGGTTGCATTGTTTTTCTATACAC 58.549 36.000 0.00 0.00 0.00 2.90
237 238 7.096551 GGGTTGCATTGTTTTTCTATACACAT 58.903 34.615 0.00 0.00 0.00 3.21
238 239 7.602265 GGGTTGCATTGTTTTTCTATACACATT 59.398 33.333 0.00 0.00 0.00 2.71
239 240 8.987890 GGTTGCATTGTTTTTCTATACACATTT 58.012 29.630 0.00 0.00 0.00 2.32
280 281 9.872757 ATATATTTTTAATACACGTGAAAGCCG 57.127 29.630 25.01 0.00 0.00 5.52
281 282 5.670149 TTTTTAATACACGTGAAAGCCGA 57.330 34.783 25.01 0.00 0.00 5.54
282 283 4.914312 TTTAATACACGTGAAAGCCGAG 57.086 40.909 25.01 0.00 0.00 4.63
284 285 2.961526 ATACACGTGAAAGCCGAGAT 57.038 45.000 25.01 0.00 0.00 2.75
286 287 2.736144 ACACGTGAAAGCCGAGATTA 57.264 45.000 25.01 0.00 0.00 1.75
287 288 3.034721 ACACGTGAAAGCCGAGATTAA 57.965 42.857 25.01 0.00 0.00 1.40
292 293 6.315393 ACACGTGAAAGCCGAGATTAATATTT 59.685 34.615 25.01 0.00 0.00 1.40
293 294 7.148306 ACACGTGAAAGCCGAGATTAATATTTT 60.148 33.333 25.01 0.00 0.00 1.82
295 296 7.908601 ACGTGAAAGCCGAGATTAATATTTTTC 59.091 33.333 0.00 0.00 0.00 2.29
296 297 7.908082 CGTGAAAGCCGAGATTAATATTTTTCA 59.092 33.333 0.00 0.00 31.76 2.69
297 298 9.567848 GTGAAAGCCGAGATTAATATTTTTCAA 57.432 29.630 7.41 0.00 34.86 2.69
437 461 7.783090 ACACATTTCACATTTTGCAAATACA 57.217 28.000 13.65 0.00 0.00 2.29
438 462 8.206325 ACACATTTCACATTTTGCAAATACAA 57.794 26.923 13.65 0.00 0.00 2.41
439 463 8.336806 ACACATTTCACATTTTGCAAATACAAG 58.663 29.630 13.65 4.22 0.00 3.16
441 465 8.891720 ACATTTCACATTTTGCAAATACAAGTT 58.108 25.926 13.65 0.00 0.00 2.66
445 469 8.932945 TCACATTTTGCAAATACAAGTTAACA 57.067 26.923 13.65 0.00 0.00 2.41
446 470 9.539825 TCACATTTTGCAAATACAAGTTAACAT 57.460 25.926 13.65 0.00 0.00 2.71
495 519 8.055181 ACATTTTAGGTAGACATGGTCATCATT 58.945 33.333 0.00 0.00 34.60 2.57
508 532 8.677300 ACATGGTCATCATTTTTCTATACACAC 58.323 33.333 0.00 0.00 32.92 3.82
527 551 9.935682 ATACACACTTAGAAATATCAAAATGCG 57.064 29.630 0.00 0.00 0.00 4.73
637 669 3.628646 ATGTGGCCTCCAGCGTTCC 62.629 63.158 3.32 0.00 45.17 3.62
727 1041 5.416952 GGCCGAATTAATCATCATCAATCCT 59.583 40.000 0.00 0.00 0.00 3.24
728 1042 6.599244 GGCCGAATTAATCATCATCAATCCTA 59.401 38.462 0.00 0.00 0.00 2.94
732 1051 6.653273 ATTAATCATCATCAATCCTACGCG 57.347 37.500 3.53 3.53 0.00 6.01
786 1110 2.743636 TTAACTCAGCGTTCCTCCTG 57.256 50.000 0.00 0.00 37.05 3.86
854 1178 1.671379 GAAAACGCTCCCCGCTCTT 60.671 57.895 0.00 0.00 41.76 2.85
908 1249 2.964389 GCCTCAATCGCCTCTCGC 60.964 66.667 0.00 0.00 38.27 5.03
1203 1547 2.037136 GGACGACGACGAGGAGGAA 61.037 63.158 15.32 0.00 42.66 3.36
1344 1706 2.835895 GAGGAGGAGGAGGACGGC 60.836 72.222 0.00 0.00 0.00 5.68
1421 1783 0.872021 GGGTAGCAGAATCGCTGTCG 60.872 60.000 9.22 0.00 46.62 4.35
1512 1874 0.597568 TTGGTTCCGCAGCATTTCTG 59.402 50.000 0.00 0.00 45.62 3.02
1540 1902 2.957871 CGATTTCTGTGATCGCCGA 58.042 52.632 3.31 0.00 39.75 5.54
1545 1907 0.807275 TTCTGTGATCGCCGATGCTG 60.807 55.000 3.34 1.66 34.43 4.41
1576 1938 3.055385 TCTGGAACCCTTGATTAACCTCG 60.055 47.826 0.00 0.00 0.00 4.63
1648 2011 3.860754 GCTTAGTTGGGTTGTTTGATGGC 60.861 47.826 0.00 0.00 0.00 4.40
1696 2059 0.764890 TGCTTCAGTGTTGGCTAGGT 59.235 50.000 0.00 0.00 0.00 3.08
1698 2061 1.807142 GCTTCAGTGTTGGCTAGGTTC 59.193 52.381 0.00 0.00 0.00 3.62
1737 2112 3.181493 CCATCAGTGGCAATGCTTCTTAC 60.181 47.826 10.58 0.00 39.01 2.34
1787 2162 8.865590 AATTTAGTGCGAACTGTGTTAATTTT 57.134 26.923 6.22 0.00 0.00 1.82
1954 2336 3.826524 TCCAAACCAGCATTGTAGTCAA 58.173 40.909 0.00 0.00 37.98 3.18
1963 2345 4.275196 CAGCATTGTAGTCAAGATGATGGG 59.725 45.833 0.00 0.00 36.97 4.00
1998 2380 4.345547 CCTCCAGAAATTACTAGGGACCTC 59.654 50.000 0.00 0.00 0.00 3.85
2455 2841 4.322080 TCCAATGGATGATACAGACGAC 57.678 45.455 0.00 0.00 0.00 4.34
2850 3236 2.242196 CCCATGTCAAGGAGGTAACCAT 59.758 50.000 0.00 0.00 37.17 3.55
2852 3238 4.344104 CCATGTCAAGGAGGTAACCATTT 58.656 43.478 0.00 0.00 37.17 2.32
3300 3686 6.539464 TCACCTTTCAACGTAACATACACTTT 59.461 34.615 0.00 0.00 0.00 2.66
3438 3824 6.037391 CACTGCTGTGTCCAAAAATTGAATTT 59.963 34.615 15.05 0.00 39.24 1.82
3536 3922 1.246056 TGCTTGCTTGCTGGATGACC 61.246 55.000 3.47 0.00 0.00 4.02
3608 3994 1.060122 GAAGTCGTTTATTCCACCGCG 59.940 52.381 0.00 0.00 0.00 6.46
3769 4155 4.165565 TCCTGTAGAACGGAGGAGAGATAA 59.834 45.833 0.00 0.00 31.95 1.75
3829 4215 8.954950 TTAAAATTTGAAGATGGTTTCTTGCA 57.045 26.923 0.00 0.00 44.88 4.08
3937 4323 4.122776 GACGTGAATGAAGATGTGGCTAT 58.877 43.478 0.00 0.00 0.00 2.97
4550 4942 2.092753 AGGTTGCTACCCATCATGTCTG 60.093 50.000 14.06 0.00 46.28 3.51
4577 4969 5.220796 GGCTACGAAACAACTTATCCCATTC 60.221 44.000 0.00 0.00 0.00 2.67
4851 5243 6.049149 CGGTGTCAACTAAGGATATTGTCAT 58.951 40.000 0.00 0.00 0.00 3.06
5456 5848 1.694696 CCCCTCCTATCTAACACAGCC 59.305 57.143 0.00 0.00 0.00 4.85
5489 5881 2.920912 GGAGGTGGTCGTGGTGGA 60.921 66.667 0.00 0.00 0.00 4.02
5631 6023 6.428159 ACTTATGAAGATTGTCACAGGTGAAC 59.572 38.462 3.28 0.02 41.85 3.18
5634 6026 4.335315 TGAAGATTGTCACAGGTGAACAAC 59.665 41.667 14.88 11.00 41.85 3.32
5784 6176 8.243426 TGATCAACCATATTTAACAAGCTGTTC 58.757 33.333 0.00 0.00 40.22 3.18
5930 6322 2.301870 CCTGGAGGTGTGCTTACTTACA 59.698 50.000 0.00 0.00 0.00 2.41
5931 6323 3.055094 CCTGGAGGTGTGCTTACTTACAT 60.055 47.826 0.00 0.00 0.00 2.29
5932 6324 4.161565 CCTGGAGGTGTGCTTACTTACATA 59.838 45.833 0.00 0.00 0.00 2.29
5933 6325 5.339008 TGGAGGTGTGCTTACTTACATAG 57.661 43.478 0.00 0.00 0.00 2.23
5934 6326 4.775780 TGGAGGTGTGCTTACTTACATAGT 59.224 41.667 0.00 0.00 41.04 2.12
5935 6327 5.247564 TGGAGGTGTGCTTACTTACATAGTT 59.752 40.000 0.00 0.00 38.33 2.24
5936 6328 6.438108 TGGAGGTGTGCTTACTTACATAGTTA 59.562 38.462 0.00 0.00 38.33 2.24
5937 6329 6.755607 GGAGGTGTGCTTACTTACATAGTTAC 59.244 42.308 0.00 0.00 38.33 2.50
5966 6358 9.695526 TCTTTGTTATGGTTCAATTTGAGATTG 57.304 29.630 0.00 0.00 0.00 2.67
6067 6540 8.797266 ACTTCTAATTTCCGTGAATTTGAAAC 57.203 30.769 13.87 0.00 38.93 2.78
6577 7050 2.354821 GCGAAGTGGAGTGTTGAAACTT 59.645 45.455 0.00 0.00 33.91 2.66
6799 7272 1.347707 CACAGCCAGGAACTCCAGTAA 59.652 52.381 0.00 0.00 34.60 2.24
6850 7323 2.384375 TCAGGGTGGGAAAGTACCTCTA 59.616 50.000 0.00 0.00 37.15 2.43
6981 7454 1.396653 CAGGGAATGCTGGAATGGAC 58.603 55.000 0.00 0.00 0.00 4.02
7023 7496 0.612732 TGCCCTTGCCCTTTCATCTG 60.613 55.000 0.00 0.00 36.33 2.90
7051 7524 1.478105 GATGGGATTGAAACCAGCACC 59.522 52.381 3.18 0.00 42.50 5.01
7052 7525 0.482446 TGGGATTGAAACCAGCACCT 59.518 50.000 0.00 0.00 31.92 4.00
7053 7526 1.133199 TGGGATTGAAACCAGCACCTT 60.133 47.619 0.00 0.00 31.92 3.50
7054 7527 1.970640 GGGATTGAAACCAGCACCTTT 59.029 47.619 0.00 0.00 0.00 3.11
7205 7678 3.532542 GGAAGTGCTCCTGGTATGTAAC 58.467 50.000 0.00 0.00 41.61 2.50
7241 7714 3.003585 TGTTACAAGTGCATGCAGAAGTG 59.996 43.478 23.41 18.03 0.00 3.16
7267 7740 1.686052 TCCACATGTTTCTTTGGTGCC 59.314 47.619 0.00 0.00 0.00 5.01
7295 7783 4.386867 TTTTATCTCCGCGAGTCTGAAT 57.613 40.909 8.23 0.00 0.00 2.57
7529 8017 2.986728 AGTAGACCTGGTGATTTTGGGT 59.013 45.455 2.82 0.00 0.00 4.51
7541 8029 5.151389 GTGATTTTGGGTAAACTAGCAACG 58.849 41.667 0.00 0.00 0.00 4.10
7601 8093 3.312697 GTCCTAGGCCGCAAAATTAGAAG 59.687 47.826 2.96 0.00 0.00 2.85
7611 8103 6.588373 GCCGCAAAATTAGAAGGAAAAATACA 59.412 34.615 0.00 0.00 0.00 2.29
7642 8134 7.072177 TGGTCAACTTAGCAATTTTAGATCG 57.928 36.000 0.00 0.00 0.00 3.69
7643 8135 5.965918 GGTCAACTTAGCAATTTTAGATCGC 59.034 40.000 0.00 0.00 0.00 4.58
7661 8155 1.802880 CGCTCTAACCGGTCAGATTGG 60.803 57.143 8.22 0.00 0.00 3.16
7681 8175 3.572255 TGGTTGTTCTTAATCCCACTTGC 59.428 43.478 0.00 0.00 0.00 4.01
7684 8178 4.365514 TGTTCTTAATCCCACTTGCTCA 57.634 40.909 0.00 0.00 0.00 4.26
7708 8202 8.219868 TCAGTATCATGTGAATTATTGGACCAT 58.780 33.333 0.00 0.00 0.00 3.55
7722 8216 9.911788 ATTATTGGACCATGATGTAGATATTCC 57.088 33.333 0.00 0.00 0.00 3.01
7723 8217 5.762179 TGGACCATGATGTAGATATTCCC 57.238 43.478 0.00 0.00 0.00 3.97
7725 8219 5.249163 TGGACCATGATGTAGATATTCCCAG 59.751 44.000 0.00 0.00 0.00 4.45
7791 8285 1.554617 TGACATGACACATCATCCCGT 59.445 47.619 0.00 0.00 44.13 5.28
7809 8303 4.454504 TCCCGTTTTATCTTTCTGCACTTC 59.545 41.667 0.00 0.00 0.00 3.01
7814 8308 7.009815 CCGTTTTATCTTTCTGCACTTCGTATA 59.990 37.037 0.00 0.00 0.00 1.47
7816 8310 8.870879 GTTTTATCTTTCTGCACTTCGTATACT 58.129 33.333 0.56 0.00 0.00 2.12
7847 8341 6.605471 ACTTTTTGGATTGGGATTTACTCC 57.395 37.500 0.00 0.00 44.11 3.85
7894 8388 4.323409 GGAGAATCTCTTTCAAGTCTGCCT 60.323 45.833 10.38 0.00 36.75 4.75
7898 8392 5.946942 ATCTCTTTCAAGTCTGCCTGATA 57.053 39.130 0.00 0.00 0.00 2.15
7900 8394 4.081420 TCTCTTTCAAGTCTGCCTGATACC 60.081 45.833 0.00 0.00 0.00 2.73
7905 8399 3.118629 TCAAGTCTGCCTGATACCACATC 60.119 47.826 0.00 0.00 0.00 3.06
7923 8443 3.300711 CGGTTTCCGTTCTGAACCT 57.699 52.632 14.48 0.00 42.73 3.50
7935 8455 1.512996 CTGAACCTGTGGCAGTGCAG 61.513 60.000 18.61 5.66 0.00 4.41
7936 8456 2.908940 AACCTGTGGCAGTGCAGC 60.909 61.111 18.61 9.31 0.00 5.25
7937 8457 3.719646 AACCTGTGGCAGTGCAGCA 62.720 57.895 18.61 13.56 35.83 4.41
7938 8458 2.675423 CCTGTGGCAGTGCAGCAT 60.675 61.111 18.61 0.00 35.83 3.79
7969 8489 8.023128 CAGTTGATGGAAACCAGTTTTATGTAG 58.977 37.037 0.00 0.00 36.75 2.74
7971 8491 5.417580 TGATGGAAACCAGTTTTATGTAGGC 59.582 40.000 0.00 0.00 36.75 3.93
7982 8502 4.994907 TTTATGTAGGCGAGCTGAGTTA 57.005 40.909 0.00 0.00 0.00 2.24
7983 8503 4.569761 TTATGTAGGCGAGCTGAGTTAG 57.430 45.455 0.00 0.00 0.00 2.34
7984 8504 1.103803 TGTAGGCGAGCTGAGTTAGG 58.896 55.000 0.00 0.00 0.00 2.69
7985 8505 0.386113 GTAGGCGAGCTGAGTTAGGG 59.614 60.000 0.00 0.00 0.00 3.53
8018 8538 0.833834 ATAGGATCCACGCCTCCAGG 60.834 60.000 15.82 0.00 36.96 4.45
8019 8539 2.946988 TAGGATCCACGCCTCCAGGG 62.947 65.000 15.82 0.00 36.96 4.45
8038 8558 2.392662 GGGACCATGACTGAGAGATCA 58.607 52.381 0.00 0.00 0.00 2.92
8039 8559 2.768527 GGGACCATGACTGAGAGATCAA 59.231 50.000 0.00 0.00 0.00 2.57
8040 8560 3.198635 GGGACCATGACTGAGAGATCAAA 59.801 47.826 0.00 0.00 0.00 2.69
8041 8561 4.323792 GGGACCATGACTGAGAGATCAAAA 60.324 45.833 0.00 0.00 0.00 2.44
8042 8562 5.248640 GGACCATGACTGAGAGATCAAAAA 58.751 41.667 0.00 0.00 0.00 1.94
8043 8563 5.884792 GGACCATGACTGAGAGATCAAAAAT 59.115 40.000 0.00 0.00 0.00 1.82
8044 8564 7.050377 GGACCATGACTGAGAGATCAAAAATA 58.950 38.462 0.00 0.00 0.00 1.40
8045 8565 7.226325 GGACCATGACTGAGAGATCAAAAATAG 59.774 40.741 0.00 0.00 0.00 1.73
8046 8566 6.541641 ACCATGACTGAGAGATCAAAAATAGC 59.458 38.462 0.00 0.00 0.00 2.97
8047 8567 6.766944 CCATGACTGAGAGATCAAAAATAGCT 59.233 38.462 0.00 0.00 0.00 3.32
8048 8568 7.254829 CCATGACTGAGAGATCAAAAATAGCTG 60.255 40.741 0.00 0.00 0.00 4.24
8049 8569 6.939622 TGACTGAGAGATCAAAAATAGCTGA 58.060 36.000 0.00 0.00 0.00 4.26
8050 8570 7.040494 TGACTGAGAGATCAAAAATAGCTGAG 58.960 38.462 0.00 0.00 0.00 3.35
8051 8571 6.347696 ACTGAGAGATCAAAAATAGCTGAGG 58.652 40.000 0.00 0.00 0.00 3.86
8052 8572 6.155910 ACTGAGAGATCAAAAATAGCTGAGGA 59.844 38.462 0.00 0.00 0.00 3.71
8053 8573 7.134362 TGAGAGATCAAAAATAGCTGAGGAT 57.866 36.000 0.00 0.00 0.00 3.24
8054 8574 7.571919 TGAGAGATCAAAAATAGCTGAGGATT 58.428 34.615 0.00 0.00 0.00 3.01
8055 8575 7.498239 TGAGAGATCAAAAATAGCTGAGGATTG 59.502 37.037 0.00 0.00 0.00 2.67
8056 8576 7.571919 AGAGATCAAAAATAGCTGAGGATTGA 58.428 34.615 0.00 1.28 0.00 2.57
8057 8577 8.051535 AGAGATCAAAAATAGCTGAGGATTGAA 58.948 33.333 0.00 0.00 0.00 2.69
8058 8578 8.585471 AGATCAAAAATAGCTGAGGATTGAAA 57.415 30.769 0.00 0.00 0.00 2.69
8059 8579 9.028284 AGATCAAAAATAGCTGAGGATTGAAAA 57.972 29.630 0.00 0.00 0.00 2.29
8060 8580 9.643693 GATCAAAAATAGCTGAGGATTGAAAAA 57.356 29.630 0.00 0.00 0.00 1.94
8062 8582 9.426837 TCAAAAATAGCTGAGGATTGAAAAATG 57.573 29.630 0.00 0.00 0.00 2.32
8063 8583 8.662141 CAAAAATAGCTGAGGATTGAAAAATGG 58.338 33.333 0.00 0.00 0.00 3.16
8064 8584 7.486407 AAATAGCTGAGGATTGAAAAATGGT 57.514 32.000 0.00 0.00 0.00 3.55
8065 8585 7.486407 AATAGCTGAGGATTGAAAAATGGTT 57.514 32.000 0.00 0.00 0.00 3.67
8066 8586 5.397142 AGCTGAGGATTGAAAAATGGTTC 57.603 39.130 0.00 0.00 0.00 3.62
8067 8587 4.834496 AGCTGAGGATTGAAAAATGGTTCA 59.166 37.500 0.00 0.00 35.72 3.18
8068 8588 5.047519 AGCTGAGGATTGAAAAATGGTTCAG 60.048 40.000 0.00 0.00 38.69 3.02
8069 8589 5.279156 GCTGAGGATTGAAAAATGGTTCAGT 60.279 40.000 0.00 0.00 38.69 3.41
8070 8590 6.088016 TGAGGATTGAAAAATGGTTCAGTG 57.912 37.500 0.00 0.00 38.69 3.66
8071 8591 5.832595 TGAGGATTGAAAAATGGTTCAGTGA 59.167 36.000 0.00 0.00 38.69 3.41
8072 8592 6.016024 TGAGGATTGAAAAATGGTTCAGTGAG 60.016 38.462 0.00 0.00 38.69 3.51
8073 8593 4.925646 GGATTGAAAAATGGTTCAGTGAGC 59.074 41.667 0.00 0.00 38.69 4.26
8074 8594 5.279156 GGATTGAAAAATGGTTCAGTGAGCT 60.279 40.000 6.95 0.00 38.69 4.09
8075 8595 6.071952 GGATTGAAAAATGGTTCAGTGAGCTA 60.072 38.462 6.95 0.69 38.69 3.32
8076 8596 5.947228 TGAAAAATGGTTCAGTGAGCTAG 57.053 39.130 6.95 0.00 32.56 3.42
8077 8597 5.620206 TGAAAAATGGTTCAGTGAGCTAGA 58.380 37.500 6.95 0.00 32.56 2.43
8078 8598 6.240894 TGAAAAATGGTTCAGTGAGCTAGAT 58.759 36.000 6.95 0.00 32.56 1.98
8079 8599 6.372659 TGAAAAATGGTTCAGTGAGCTAGATC 59.627 38.462 6.95 0.00 32.56 2.75
8080 8600 4.414337 AATGGTTCAGTGAGCTAGATCC 57.586 45.455 5.36 0.00 0.00 3.36
8081 8601 2.111384 TGGTTCAGTGAGCTAGATCCC 58.889 52.381 5.36 0.00 0.00 3.85
8082 8602 2.111384 GGTTCAGTGAGCTAGATCCCA 58.889 52.381 5.36 0.00 0.00 4.37
8083 8603 2.703007 GGTTCAGTGAGCTAGATCCCAT 59.297 50.000 5.36 0.00 0.00 4.00
8084 8604 3.135530 GGTTCAGTGAGCTAGATCCCATT 59.864 47.826 5.36 0.00 0.00 3.16
8085 8605 4.384647 GGTTCAGTGAGCTAGATCCCATTT 60.385 45.833 5.36 0.00 0.00 2.32
8086 8606 4.679373 TCAGTGAGCTAGATCCCATTTC 57.321 45.455 5.36 0.00 0.00 2.17
8087 8607 4.033009 TCAGTGAGCTAGATCCCATTTCA 58.967 43.478 5.36 0.00 0.00 2.69
8088 8608 4.100653 TCAGTGAGCTAGATCCCATTTCAG 59.899 45.833 5.36 0.00 0.00 3.02
8089 8609 4.100653 CAGTGAGCTAGATCCCATTTCAGA 59.899 45.833 5.36 0.00 0.00 3.27
8090 8610 4.718774 AGTGAGCTAGATCCCATTTCAGAA 59.281 41.667 5.36 0.00 0.00 3.02
8091 8611 5.190528 AGTGAGCTAGATCCCATTTCAGAAA 59.809 40.000 5.36 0.00 0.00 2.52
8092 8612 5.882557 GTGAGCTAGATCCCATTTCAGAAAA 59.117 40.000 5.36 0.00 0.00 2.29
8093 8613 6.545298 GTGAGCTAGATCCCATTTCAGAAAAT 59.455 38.462 5.36 0.00 35.43 1.82
8104 8624 5.869753 ATTTCAGAAAATGACGAGGTCAG 57.130 39.130 0.00 0.00 46.04 3.51
8105 8625 2.688507 TCAGAAAATGACGAGGTCAGC 58.311 47.619 4.65 0.00 46.04 4.26
8106 8626 2.300152 TCAGAAAATGACGAGGTCAGCT 59.700 45.455 4.65 0.00 46.04 4.24
8107 8627 2.670414 CAGAAAATGACGAGGTCAGCTC 59.330 50.000 4.65 0.00 46.04 4.09
8108 8628 2.564947 AGAAAATGACGAGGTCAGCTCT 59.435 45.455 1.64 3.60 46.04 4.09
8109 8629 3.007398 AGAAAATGACGAGGTCAGCTCTT 59.993 43.478 1.64 0.00 46.04 2.85
8110 8630 4.220821 AGAAAATGACGAGGTCAGCTCTTA 59.779 41.667 1.64 0.00 46.04 2.10
8111 8631 4.744795 AAATGACGAGGTCAGCTCTTAT 57.255 40.909 1.64 0.00 46.04 1.73
8112 8632 4.744795 AATGACGAGGTCAGCTCTTATT 57.255 40.909 1.64 0.00 46.04 1.40
8113 8633 4.744795 ATGACGAGGTCAGCTCTTATTT 57.255 40.909 1.64 0.00 46.04 1.40
8114 8634 5.854010 ATGACGAGGTCAGCTCTTATTTA 57.146 39.130 1.64 0.00 46.04 1.40
8115 8635 4.995124 TGACGAGGTCAGCTCTTATTTAC 58.005 43.478 1.64 0.00 37.67 2.01
8116 8636 4.461431 TGACGAGGTCAGCTCTTATTTACA 59.539 41.667 1.64 0.00 37.67 2.41
8117 8637 5.127194 TGACGAGGTCAGCTCTTATTTACAT 59.873 40.000 1.64 0.00 37.67 2.29
8118 8638 6.320418 TGACGAGGTCAGCTCTTATTTACATA 59.680 38.462 1.64 0.00 37.67 2.29
8119 8639 7.014326 TGACGAGGTCAGCTCTTATTTACATAT 59.986 37.037 1.64 0.00 37.67 1.78
8120 8640 8.405418 ACGAGGTCAGCTCTTATTTACATATA 57.595 34.615 1.64 0.00 0.00 0.86
8121 8641 8.298140 ACGAGGTCAGCTCTTATTTACATATAC 58.702 37.037 1.64 0.00 0.00 1.47
8122 8642 8.297426 CGAGGTCAGCTCTTATTTACATATACA 58.703 37.037 1.64 0.00 0.00 2.29
8123 8643 9.982651 GAGGTCAGCTCTTATTTACATATACAA 57.017 33.333 0.00 0.00 0.00 2.41
8147 8667 6.870971 AAAAATTGCAATCATTTGTCAGCT 57.129 29.167 13.38 0.00 35.17 4.24
8148 8668 6.870971 AAAATTGCAATCATTTGTCAGCTT 57.129 29.167 13.38 0.00 35.17 3.74
8149 8669 5.856126 AATTGCAATCATTTGTCAGCTTG 57.144 34.783 13.38 0.00 35.17 4.01
8150 8670 3.306917 TGCAATCATTTGTCAGCTTGG 57.693 42.857 0.00 0.00 35.17 3.61
8151 8671 2.028839 TGCAATCATTTGTCAGCTTGGG 60.029 45.455 0.00 0.00 35.17 4.12
8152 8672 2.231964 GCAATCATTTGTCAGCTTGGGA 59.768 45.455 0.00 0.00 35.17 4.37
8153 8673 3.306225 GCAATCATTTGTCAGCTTGGGAA 60.306 43.478 0.00 0.00 35.17 3.97
8154 8674 4.800249 GCAATCATTTGTCAGCTTGGGAAA 60.800 41.667 0.00 0.00 35.17 3.13
8155 8675 5.299148 CAATCATTTGTCAGCTTGGGAAAA 58.701 37.500 0.00 0.00 0.00 2.29
8156 8676 4.589216 TCATTTGTCAGCTTGGGAAAAG 57.411 40.909 0.00 0.00 0.00 2.27
8157 8677 3.960102 TCATTTGTCAGCTTGGGAAAAGT 59.040 39.130 0.00 0.00 0.00 2.66
8158 8678 4.405358 TCATTTGTCAGCTTGGGAAAAGTT 59.595 37.500 0.00 0.00 0.00 2.66
8159 8679 5.596361 TCATTTGTCAGCTTGGGAAAAGTTA 59.404 36.000 0.00 0.00 0.00 2.24
8160 8680 4.911514 TTGTCAGCTTGGGAAAAGTTAC 57.088 40.909 0.00 0.00 0.00 2.50
8161 8681 3.219281 TGTCAGCTTGGGAAAAGTTACC 58.781 45.455 0.00 0.00 0.00 2.85
8162 8682 2.225727 GTCAGCTTGGGAAAAGTTACCG 59.774 50.000 0.00 0.00 0.00 4.02
8163 8683 1.068541 CAGCTTGGGAAAAGTTACCGC 60.069 52.381 0.00 0.00 0.00 5.68
8164 8684 0.955905 GCTTGGGAAAAGTTACCGCA 59.044 50.000 0.00 0.00 0.00 5.69
8165 8685 1.335597 GCTTGGGAAAAGTTACCGCAC 60.336 52.381 0.00 0.00 0.00 5.34
8166 8686 1.950909 CTTGGGAAAAGTTACCGCACA 59.049 47.619 0.00 0.00 0.00 4.57
8167 8687 2.279935 TGGGAAAAGTTACCGCACAT 57.720 45.000 0.00 0.00 0.00 3.21
8168 8688 2.588620 TGGGAAAAGTTACCGCACATT 58.411 42.857 0.00 0.00 0.00 2.71
8169 8689 2.959707 TGGGAAAAGTTACCGCACATTT 59.040 40.909 0.00 0.00 0.00 2.32
8170 8690 3.243569 TGGGAAAAGTTACCGCACATTTG 60.244 43.478 0.00 0.00 0.00 2.32
8171 8691 3.243602 GGGAAAAGTTACCGCACATTTGT 60.244 43.478 0.00 0.00 0.00 2.83
8172 8692 3.978855 GGAAAAGTTACCGCACATTTGTC 59.021 43.478 0.00 0.00 0.00 3.18
8173 8693 4.261447 GGAAAAGTTACCGCACATTTGTCT 60.261 41.667 0.00 0.00 0.00 3.41
8174 8694 5.049267 GGAAAAGTTACCGCACATTTGTCTA 60.049 40.000 0.00 0.00 0.00 2.59
8175 8695 5.607119 AAAGTTACCGCACATTTGTCTAG 57.393 39.130 0.00 0.00 0.00 2.43
8176 8696 4.530710 AGTTACCGCACATTTGTCTAGA 57.469 40.909 0.00 0.00 0.00 2.43
8177 8697 4.890088 AGTTACCGCACATTTGTCTAGAA 58.110 39.130 0.00 0.00 0.00 2.10
8178 8698 5.488341 AGTTACCGCACATTTGTCTAGAAT 58.512 37.500 0.00 0.00 0.00 2.40
8179 8699 6.636705 AGTTACCGCACATTTGTCTAGAATA 58.363 36.000 0.00 0.00 0.00 1.75
8180 8700 7.101054 AGTTACCGCACATTTGTCTAGAATAA 58.899 34.615 0.00 0.00 0.00 1.40
8181 8701 7.277981 AGTTACCGCACATTTGTCTAGAATAAG 59.722 37.037 0.00 0.00 0.00 1.73
8182 8702 5.730550 ACCGCACATTTGTCTAGAATAAGA 58.269 37.500 0.00 0.00 0.00 2.10
8183 8703 6.170506 ACCGCACATTTGTCTAGAATAAGAA 58.829 36.000 0.00 0.00 0.00 2.52
8184 8704 6.653320 ACCGCACATTTGTCTAGAATAAGAAA 59.347 34.615 0.00 0.00 0.00 2.52
8185 8705 6.961554 CCGCACATTTGTCTAGAATAAGAAAC 59.038 38.462 0.00 0.00 0.00 2.78
8186 8706 7.360861 CCGCACATTTGTCTAGAATAAGAAACA 60.361 37.037 0.00 0.00 0.00 2.83
8187 8707 7.478667 CGCACATTTGTCTAGAATAAGAAACAC 59.521 37.037 0.00 0.00 0.00 3.32
8188 8708 7.750903 GCACATTTGTCTAGAATAAGAAACACC 59.249 37.037 0.00 0.00 0.00 4.16
8189 8709 8.783093 CACATTTGTCTAGAATAAGAAACACCA 58.217 33.333 0.00 0.00 0.00 4.17
8190 8710 9.349713 ACATTTGTCTAGAATAAGAAACACCAA 57.650 29.630 0.00 0.00 0.00 3.67
8191 8711 9.612620 CATTTGTCTAGAATAAGAAACACCAAC 57.387 33.333 0.00 0.00 0.00 3.77
8192 8712 8.974060 TTTGTCTAGAATAAGAAACACCAACT 57.026 30.769 0.00 0.00 0.00 3.16
8193 8713 8.974060 TTGTCTAGAATAAGAAACACCAACTT 57.026 30.769 0.00 0.00 0.00 2.66
8194 8714 8.378172 TGTCTAGAATAAGAAACACCAACTTG 57.622 34.615 0.00 0.00 0.00 3.16
8195 8715 8.208224 TGTCTAGAATAAGAAACACCAACTTGA 58.792 33.333 0.00 0.00 0.00 3.02
8196 8716 9.220767 GTCTAGAATAAGAAACACCAACTTGAT 57.779 33.333 0.00 0.00 0.00 2.57
8224 8744 7.827819 AAAAACTCTTGCAGTAACCTTTTTC 57.172 32.000 0.00 0.00 32.30 2.29
8225 8745 4.813296 ACTCTTGCAGTAACCTTTTTCG 57.187 40.909 0.00 0.00 31.37 3.46
8226 8746 3.564225 ACTCTTGCAGTAACCTTTTTCGG 59.436 43.478 0.00 0.00 31.37 4.30
8227 8747 3.547746 TCTTGCAGTAACCTTTTTCGGT 58.452 40.909 0.00 0.00 39.48 4.69
8269 8789 9.011095 ACTTATTGTAAAAGAAACCTCTAAGCC 57.989 33.333 0.00 0.00 0.00 4.35
8292 8812 9.212593 AGCCCAAAACCACAAATAATTATATCT 57.787 29.630 0.00 0.00 0.00 1.98
8366 8886 5.401550 TCTTTTAAGGCATGATTCTTTGCG 58.598 37.500 0.00 0.00 39.78 4.85
8367 8887 4.782019 TTTAAGGCATGATTCTTTGCGT 57.218 36.364 0.00 4.53 39.78 5.24
8368 8888 4.782019 TTAAGGCATGATTCTTTGCGTT 57.218 36.364 17.65 17.65 45.63 4.84
8370 8890 0.994263 GGCATGATTCTTTGCGTTGC 59.006 50.000 0.00 0.00 39.78 4.17
8371 8891 1.669502 GGCATGATTCTTTGCGTTGCA 60.670 47.619 0.00 0.00 39.78 4.08
8372 8892 2.264813 GCATGATTCTTTGCGTTGCAT 58.735 42.857 0.00 0.00 38.76 3.96
8373 8893 3.437428 GCATGATTCTTTGCGTTGCATA 58.563 40.909 0.00 0.00 38.76 3.14
8374 8894 3.858812 GCATGATTCTTTGCGTTGCATAA 59.141 39.130 0.00 0.00 38.76 1.90
8375 8895 4.505191 GCATGATTCTTTGCGTTGCATAAT 59.495 37.500 0.00 0.00 38.76 1.28
8414 8940 6.509418 TGAGTATTTGTGCCTTTTCCATAC 57.491 37.500 0.00 0.00 0.00 2.39
8422 8948 5.250200 TGTGCCTTTTCCATACGACTTTAT 58.750 37.500 0.00 0.00 0.00 1.40
8428 8954 8.671028 GCCTTTTCCATACGACTTTATTTTCTA 58.329 33.333 0.00 0.00 0.00 2.10
8453 8979 8.792830 ATAGCTATTGTACTTTTCTTGCTTGA 57.207 30.769 0.00 0.00 0.00 3.02
8454 8980 7.693969 AGCTATTGTACTTTTCTTGCTTGAT 57.306 32.000 0.00 0.00 0.00 2.57
8455 8981 7.533426 AGCTATTGTACTTTTCTTGCTTGATG 58.467 34.615 0.00 0.00 0.00 3.07
8528 9055 2.678336 GGTTCCAATTCCATCGTCACTC 59.322 50.000 0.00 0.00 0.00 3.51
8542 9069 1.001268 GTCACTCGTCACTCTGCTTCA 60.001 52.381 0.00 0.00 0.00 3.02
8543 9070 1.681264 TCACTCGTCACTCTGCTTCAA 59.319 47.619 0.00 0.00 0.00 2.69
8544 9071 1.789464 CACTCGTCACTCTGCTTCAAC 59.211 52.381 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.863401 AGAACAAGTGAAAAACCGGC 57.137 45.000 0.00 0.00 0.00 6.13
24 25 6.231258 ACCCCACGTAAACCAAAAATTTAA 57.769 33.333 0.00 0.00 0.00 1.52
25 26 5.866159 ACCCCACGTAAACCAAAAATTTA 57.134 34.783 0.00 0.00 0.00 1.40
26 27 4.757019 ACCCCACGTAAACCAAAAATTT 57.243 36.364 0.00 0.00 0.00 1.82
27 28 4.757019 AACCCCACGTAAACCAAAAATT 57.243 36.364 0.00 0.00 0.00 1.82
29 30 4.222366 AGAAAACCCCACGTAAACCAAAAA 59.778 37.500 0.00 0.00 0.00 1.94
30 31 3.768215 AGAAAACCCCACGTAAACCAAAA 59.232 39.130 0.00 0.00 0.00 2.44
31 32 3.363627 AGAAAACCCCACGTAAACCAAA 58.636 40.909 0.00 0.00 0.00 3.28
32 33 3.015675 AGAAAACCCCACGTAAACCAA 57.984 42.857 0.00 0.00 0.00 3.67
33 34 2.732844 AGAAAACCCCACGTAAACCA 57.267 45.000 0.00 0.00 0.00 3.67
34 35 3.130869 ACAAAGAAAACCCCACGTAAACC 59.869 43.478 0.00 0.00 0.00 3.27
35 36 4.106909 CACAAAGAAAACCCCACGTAAAC 58.893 43.478 0.00 0.00 0.00 2.01
36 37 3.762823 ACACAAAGAAAACCCCACGTAAA 59.237 39.130 0.00 0.00 0.00 2.01
37 38 3.354467 ACACAAAGAAAACCCCACGTAA 58.646 40.909 0.00 0.00 0.00 3.18
38 39 3.002038 ACACAAAGAAAACCCCACGTA 57.998 42.857 0.00 0.00 0.00 3.57
39 40 1.842052 ACACAAAGAAAACCCCACGT 58.158 45.000 0.00 0.00 0.00 4.49
40 41 2.951457 AACACAAAGAAAACCCCACG 57.049 45.000 0.00 0.00 0.00 4.94
41 42 4.827692 AGAAAACACAAAGAAAACCCCAC 58.172 39.130 0.00 0.00 0.00 4.61
43 44 5.105513 TCAGAGAAAACACAAAGAAAACCCC 60.106 40.000 0.00 0.00 0.00 4.95
44 45 5.961272 TCAGAGAAAACACAAAGAAAACCC 58.039 37.500 0.00 0.00 0.00 4.11
45 46 7.222805 GGAATCAGAGAAAACACAAAGAAAACC 59.777 37.037 0.00 0.00 0.00 3.27
47 48 7.124147 AGGGAATCAGAGAAAACACAAAGAAAA 59.876 33.333 0.00 0.00 0.00 2.29
50 51 5.694995 AGGGAATCAGAGAAAACACAAAGA 58.305 37.500 0.00 0.00 0.00 2.52
53 54 6.433847 TCTAGGGAATCAGAGAAAACACAA 57.566 37.500 0.00 0.00 0.00 3.33
54 55 6.627087 ATCTAGGGAATCAGAGAAAACACA 57.373 37.500 0.00 0.00 0.00 3.72
55 56 7.929941 AAATCTAGGGAATCAGAGAAAACAC 57.070 36.000 0.00 0.00 0.00 3.32
56 57 8.386264 AGAAAATCTAGGGAATCAGAGAAAACA 58.614 33.333 0.00 0.00 0.00 2.83
57 58 8.800370 AGAAAATCTAGGGAATCAGAGAAAAC 57.200 34.615 0.00 0.00 0.00 2.43
58 59 8.830741 AGAGAAAATCTAGGGAATCAGAGAAAA 58.169 33.333 0.00 0.00 36.10 2.29
59 60 8.263640 CAGAGAAAATCTAGGGAATCAGAGAAA 58.736 37.037 0.00 0.00 36.10 2.52
60 61 7.401493 ACAGAGAAAATCTAGGGAATCAGAGAA 59.599 37.037 0.00 0.00 36.10 2.87
61 62 6.900186 ACAGAGAAAATCTAGGGAATCAGAGA 59.100 38.462 0.00 0.00 36.10 3.10
63 64 7.502060 AACAGAGAAAATCTAGGGAATCAGA 57.498 36.000 0.00 0.00 36.10 3.27
65 66 7.611855 GGAAAACAGAGAAAATCTAGGGAATCA 59.388 37.037 0.00 0.00 36.10 2.57
66 67 7.831690 AGGAAAACAGAGAAAATCTAGGGAATC 59.168 37.037 0.00 0.00 36.10 2.52
67 68 7.613411 CAGGAAAACAGAGAAAATCTAGGGAAT 59.387 37.037 0.00 0.00 36.10 3.01
68 69 6.942576 CAGGAAAACAGAGAAAATCTAGGGAA 59.057 38.462 0.00 0.00 36.10 3.97
69 70 6.044404 ACAGGAAAACAGAGAAAATCTAGGGA 59.956 38.462 0.00 0.00 36.10 4.20
73 74 8.966868 ACAAAACAGGAAAACAGAGAAAATCTA 58.033 29.630 0.00 0.00 36.10 1.98
74 75 7.840931 ACAAAACAGGAAAACAGAGAAAATCT 58.159 30.769 0.00 0.00 39.56 2.40
76 77 7.549134 GGAACAAAACAGGAAAACAGAGAAAAT 59.451 33.333 0.00 0.00 0.00 1.82
77 78 6.871492 GGAACAAAACAGGAAAACAGAGAAAA 59.129 34.615 0.00 0.00 0.00 2.29
78 79 6.210584 AGGAACAAAACAGGAAAACAGAGAAA 59.789 34.615 0.00 0.00 0.00 2.52
79 80 5.714806 AGGAACAAAACAGGAAAACAGAGAA 59.285 36.000 0.00 0.00 0.00 2.87
80 81 5.261216 AGGAACAAAACAGGAAAACAGAGA 58.739 37.500 0.00 0.00 0.00 3.10
82 83 5.993748 AAGGAACAAAACAGGAAAACAGA 57.006 34.783 0.00 0.00 0.00 3.41
83 84 6.398095 AGAAAGGAACAAAACAGGAAAACAG 58.602 36.000 0.00 0.00 0.00 3.16
84 85 6.353404 AGAAAGGAACAAAACAGGAAAACA 57.647 33.333 0.00 0.00 0.00 2.83
85 86 6.871492 TCAAGAAAGGAACAAAACAGGAAAAC 59.129 34.615 0.00 0.00 0.00 2.43
86 87 6.998802 TCAAGAAAGGAACAAAACAGGAAAA 58.001 32.000 0.00 0.00 0.00 2.29
87 88 6.597832 TCAAGAAAGGAACAAAACAGGAAA 57.402 33.333 0.00 0.00 0.00 3.13
88 89 6.790232 ATCAAGAAAGGAACAAAACAGGAA 57.210 33.333 0.00 0.00 0.00 3.36
91 92 8.707938 AGAAAATCAAGAAAGGAACAAAACAG 57.292 30.769 0.00 0.00 0.00 3.16
92 93 9.500785 AAAGAAAATCAAGAAAGGAACAAAACA 57.499 25.926 0.00 0.00 0.00 2.83
122 123 9.157104 GGACAAAACAATAAAAACCAAGAAAGA 57.843 29.630 0.00 0.00 0.00 2.52
123 124 8.394877 GGGACAAAACAATAAAAACCAAGAAAG 58.605 33.333 0.00 0.00 0.00 2.62
124 125 8.103935 AGGGACAAAACAATAAAAACCAAGAAA 58.896 29.630 0.00 0.00 0.00 2.52
125 126 7.625469 AGGGACAAAACAATAAAAACCAAGAA 58.375 30.769 0.00 0.00 0.00 2.52
126 127 7.189079 AGGGACAAAACAATAAAAACCAAGA 57.811 32.000 0.00 0.00 0.00 3.02
127 128 7.550906 TGAAGGGACAAAACAATAAAAACCAAG 59.449 33.333 0.00 0.00 0.00 3.61
128 129 7.394816 TGAAGGGACAAAACAATAAAAACCAA 58.605 30.769 0.00 0.00 0.00 3.67
129 130 6.947464 TGAAGGGACAAAACAATAAAAACCA 58.053 32.000 0.00 0.00 0.00 3.67
130 131 8.445275 AATGAAGGGACAAAACAATAAAAACC 57.555 30.769 0.00 0.00 0.00 3.27
134 135 9.898152 AGAAAAATGAAGGGACAAAACAATAAA 57.102 25.926 0.00 0.00 0.00 1.40
135 136 9.898152 AAGAAAAATGAAGGGACAAAACAATAA 57.102 25.926 0.00 0.00 0.00 1.40
136 137 9.541143 GAAGAAAAATGAAGGGACAAAACAATA 57.459 29.630 0.00 0.00 0.00 1.90
137 138 7.224557 CGAAGAAAAATGAAGGGACAAAACAAT 59.775 33.333 0.00 0.00 0.00 2.71
138 139 6.533367 CGAAGAAAAATGAAGGGACAAAACAA 59.467 34.615 0.00 0.00 0.00 2.83
139 140 6.039616 CGAAGAAAAATGAAGGGACAAAACA 58.960 36.000 0.00 0.00 0.00 2.83
140 141 5.462068 CCGAAGAAAAATGAAGGGACAAAAC 59.538 40.000 0.00 0.00 0.00 2.43
141 142 5.128008 ACCGAAGAAAAATGAAGGGACAAAA 59.872 36.000 0.00 0.00 0.00 2.44
142 143 4.647399 ACCGAAGAAAAATGAAGGGACAAA 59.353 37.500 0.00 0.00 0.00 2.83
143 144 4.211920 ACCGAAGAAAAATGAAGGGACAA 58.788 39.130 0.00 0.00 0.00 3.18
144 145 3.818773 GACCGAAGAAAAATGAAGGGACA 59.181 43.478 0.00 0.00 0.00 4.02
145 146 3.818773 TGACCGAAGAAAAATGAAGGGAC 59.181 43.478 0.00 0.00 0.00 4.46
146 147 4.093472 TGACCGAAGAAAAATGAAGGGA 57.907 40.909 0.00 0.00 0.00 4.20
149 150 9.846248 AAGAAATATGACCGAAGAAAAATGAAG 57.154 29.630 0.00 0.00 0.00 3.02
151 152 9.840427 GAAAGAAATATGACCGAAGAAAAATGA 57.160 29.630 0.00 0.00 0.00 2.57
155 156 9.893305 GAAAGAAAGAAATATGACCGAAGAAAA 57.107 29.630 0.00 0.00 0.00 2.29
156 157 9.284968 AGAAAGAAAGAAATATGACCGAAGAAA 57.715 29.630 0.00 0.00 0.00 2.52
157 158 8.848474 AGAAAGAAAGAAATATGACCGAAGAA 57.152 30.769 0.00 0.00 0.00 2.52
158 159 8.721478 CAAGAAAGAAAGAAATATGACCGAAGA 58.279 33.333 0.00 0.00 0.00 2.87
160 161 8.391075 ACAAGAAAGAAAGAAATATGACCGAA 57.609 30.769 0.00 0.00 0.00 4.30
187 188 9.801873 CCAAGAGAAAACAAAGAAACTGATAAA 57.198 29.630 0.00 0.00 0.00 1.40
188 189 8.413229 CCCAAGAGAAAACAAAGAAACTGATAA 58.587 33.333 0.00 0.00 0.00 1.75
189 190 7.559897 ACCCAAGAGAAAACAAAGAAACTGATA 59.440 33.333 0.00 0.00 0.00 2.15
191 192 5.714806 ACCCAAGAGAAAACAAAGAAACTGA 59.285 36.000 0.00 0.00 0.00 3.41
193 194 6.398095 CAACCCAAGAGAAAACAAAGAAACT 58.602 36.000 0.00 0.00 0.00 2.66
194 195 5.063438 GCAACCCAAGAGAAAACAAAGAAAC 59.937 40.000 0.00 0.00 0.00 2.78
195 196 5.175127 GCAACCCAAGAGAAAACAAAGAAA 58.825 37.500 0.00 0.00 0.00 2.52
196 197 4.221703 TGCAACCCAAGAGAAAACAAAGAA 59.778 37.500 0.00 0.00 0.00 2.52
197 198 3.766591 TGCAACCCAAGAGAAAACAAAGA 59.233 39.130 0.00 0.00 0.00 2.52
199 200 4.751767 ATGCAACCCAAGAGAAAACAAA 57.248 36.364 0.00 0.00 0.00 2.83
200 201 4.081198 ACAATGCAACCCAAGAGAAAACAA 60.081 37.500 0.00 0.00 0.00 2.83
201 202 3.450457 ACAATGCAACCCAAGAGAAAACA 59.550 39.130 0.00 0.00 0.00 2.83
203 204 4.751767 AACAATGCAACCCAAGAGAAAA 57.248 36.364 0.00 0.00 0.00 2.29
204 205 4.751767 AAACAATGCAACCCAAGAGAAA 57.248 36.364 0.00 0.00 0.00 2.52
205 206 4.751767 AAAACAATGCAACCCAAGAGAA 57.248 36.364 0.00 0.00 0.00 2.87
207 208 4.696455 AGAAAAACAATGCAACCCAAGAG 58.304 39.130 0.00 0.00 0.00 2.85
211 212 6.040955 TGTGTATAGAAAAACAATGCAACCCA 59.959 34.615 0.00 0.00 0.00 4.51
213 214 8.532977 AATGTGTATAGAAAAACAATGCAACC 57.467 30.769 0.00 0.00 0.00 3.77
254 255 9.872757 CGGCTTTCACGTGTATTAAAAATATAT 57.127 29.630 16.51 0.00 0.00 0.86
255 256 9.096160 TCGGCTTTCACGTGTATTAAAAATATA 57.904 29.630 16.51 0.00 0.00 0.86
256 257 7.976826 TCGGCTTTCACGTGTATTAAAAATAT 58.023 30.769 16.51 0.00 0.00 1.28
257 258 7.331440 TCTCGGCTTTCACGTGTATTAAAAATA 59.669 33.333 16.51 0.00 0.00 1.40
258 259 6.148150 TCTCGGCTTTCACGTGTATTAAAAAT 59.852 34.615 16.51 0.00 0.00 1.82
259 260 5.466058 TCTCGGCTTTCACGTGTATTAAAAA 59.534 36.000 16.51 6.56 0.00 1.94
260 261 4.989797 TCTCGGCTTTCACGTGTATTAAAA 59.010 37.500 16.51 7.30 0.00 1.52
261 262 4.558178 TCTCGGCTTTCACGTGTATTAAA 58.442 39.130 16.51 7.68 0.00 1.52
262 263 4.177165 TCTCGGCTTTCACGTGTATTAA 57.823 40.909 16.51 0.00 0.00 1.40
263 264 3.853831 TCTCGGCTTTCACGTGTATTA 57.146 42.857 16.51 0.00 0.00 0.98
264 265 2.736144 TCTCGGCTTTCACGTGTATT 57.264 45.000 16.51 0.00 0.00 1.89
265 266 2.961526 ATCTCGGCTTTCACGTGTAT 57.038 45.000 16.51 0.00 0.00 2.29
267 268 2.736144 TAATCTCGGCTTTCACGTGT 57.264 45.000 16.51 0.00 0.00 4.49
269 270 6.920569 AAATATTAATCTCGGCTTTCACGT 57.079 33.333 0.00 0.00 0.00 4.49
270 271 7.908082 TGAAAAATATTAATCTCGGCTTTCACG 59.092 33.333 0.00 0.00 0.00 4.35
271 272 9.567848 TTGAAAAATATTAATCTCGGCTTTCAC 57.432 29.630 5.92 0.00 31.87 3.18
420 444 8.932945 TGTTAACTTGTATTTGCAAAATGTGA 57.067 26.923 17.19 0.00 0.00 3.58
421 445 9.796062 GATGTTAACTTGTATTTGCAAAATGTG 57.204 29.630 17.19 8.28 0.00 3.21
424 448 9.539825 TGTGATGTTAACTTGTATTTGCAAAAT 57.460 25.926 17.19 7.58 0.00 1.82
429 453 9.796062 CAAATTGTGATGTTAACTTGTATTTGC 57.204 29.630 7.22 0.00 0.00 3.68
476 500 6.725364 AGAAAAATGATGACCATGTCTACCT 58.275 36.000 0.00 0.00 35.24 3.08
477 501 8.682936 ATAGAAAAATGATGACCATGTCTACC 57.317 34.615 0.00 0.00 35.24 3.18
624 656 4.785453 CCCAGGAACGCTGGAGGC 62.785 72.222 8.95 0.00 44.39 4.70
661 693 1.534175 CGCTTAGAGCAAGACCTACGG 60.534 57.143 0.50 0.00 42.58 4.02
727 1041 4.910722 GTACATCGGCCGCGCGTA 62.911 66.667 29.95 18.01 0.00 4.42
757 1081 3.551551 ACGCTGAGTTAATTTTCGTTGC 58.448 40.909 0.00 0.00 0.00 4.17
1018 1359 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1019 1360 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
1020 1361 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
1021 1362 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1022 1363 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
1023 1364 1.293683 ACTCCTCCTCCTCCTCCTCC 61.294 65.000 0.00 0.00 0.00 4.30
1203 1547 0.391395 AGTCGTCGTCGTCATCCTCT 60.391 55.000 1.33 0.00 38.33 3.69
1344 1706 0.173708 GGCACTCACCTTCCTCGTAG 59.826 60.000 0.00 0.00 0.00 3.51
1418 1780 3.614176 GGATACGGGAAGTTAAACACGAC 59.386 47.826 0.00 0.00 0.00 4.34
1421 1783 5.945466 TTTGGATACGGGAAGTTAAACAC 57.055 39.130 0.00 0.00 42.51 3.32
1472 1834 1.135689 CGACTGGGAAGCAAAAATCCG 60.136 52.381 0.00 0.00 36.54 4.18
1512 1874 3.435566 TCACAGAAATCGTCGATAGTGC 58.564 45.455 8.43 0.00 37.40 4.40
1522 1884 1.190984 CATCGGCGATCACAGAAATCG 59.809 52.381 21.25 0.35 46.71 3.34
1576 1938 2.568090 CCAAACGCAGGCATGGTC 59.432 61.111 0.00 0.00 0.00 4.02
1648 2011 4.654091 AATGTAATTCAAGCCGGATTGG 57.346 40.909 30.62 13.46 42.50 3.16
1696 2059 6.587273 TGATGGTTCACATATGGTTATCGAA 58.413 36.000 7.80 0.00 40.72 3.71
1698 2061 5.991606 ACTGATGGTTCACATATGGTTATCG 59.008 40.000 7.80 2.75 40.72 2.92
1737 2112 4.494350 CTGATGGTTCACAACAGGAAAG 57.506 45.455 0.00 0.00 43.87 2.62
1787 2162 5.523588 TCTCCCATTTATGGCCAAATTACA 58.476 37.500 10.96 0.00 46.70 2.41
1954 2336 4.789159 AGGATATGATTCTGCCCATCATCT 59.211 41.667 5.81 0.00 40.01 2.90
1963 2345 7.882271 AGTAATTTCTGGAGGATATGATTCTGC 59.118 37.037 0.00 0.00 0.00 4.26
1998 2380 9.098355 TCGAAACCAAAACTCTTGATCATATAG 57.902 33.333 0.00 0.00 0.00 1.31
2262 2648 0.921896 ACCCACAGATAGGCAAGCAT 59.078 50.000 0.00 0.00 0.00 3.79
2447 2833 2.289072 CCAAGTTCTCCATGTCGTCTGT 60.289 50.000 0.00 0.00 0.00 3.41
2455 2841 4.841422 ACATCTCTTCCAAGTTCTCCATG 58.159 43.478 0.00 0.00 0.00 3.66
2850 3236 9.706691 AGAAGACTAGAATGTCAATTTACGAAA 57.293 29.630 0.00 0.00 39.27 3.46
2852 3238 9.140286 CAAGAAGACTAGAATGTCAATTTACGA 57.860 33.333 0.00 0.00 39.27 3.43
3300 3686 5.412594 GTCAATGAGCTCAAACCACTGATAA 59.587 40.000 22.50 0.00 0.00 1.75
3310 3696 2.516906 TGGCATGTCAATGAGCTCAAA 58.483 42.857 22.50 6.61 35.67 2.69
3438 3824 9.569122 AAGTCCTTCAATAAGTTAAAAGCTACA 57.431 29.630 0.00 0.00 0.00 2.74
3608 3994 5.277047 CCTCGTCGGTACTAAATAACCTTC 58.723 45.833 0.00 0.00 33.34 3.46
3769 4155 6.642733 TCTCAAAGTATTCCCCAGAATCTT 57.357 37.500 0.00 0.00 41.91 2.40
3937 4323 2.256306 TCCTGCTGAGTGTGGACAATA 58.744 47.619 0.00 0.00 0.00 1.90
4158 4550 3.378112 CACTGAAGGCAAGTGTTTTCTGA 59.622 43.478 6.79 0.00 0.00 3.27
4550 4942 3.305361 GGATAAGTTGTTTCGTAGCCGTC 59.695 47.826 0.00 0.00 35.01 4.79
4577 4969 8.767478 AATGATAAATTGCTGAAAAGTGAAGG 57.233 30.769 0.00 0.00 0.00 3.46
4851 5243 1.307309 CATGGCCCCTCAATGACCA 59.693 57.895 0.00 0.00 34.28 4.02
5456 5848 0.321653 CTCCTCCAAACCTTCCACCG 60.322 60.000 0.00 0.00 0.00 4.94
5585 5977 0.534877 AATCAAGCTCCACACGCACA 60.535 50.000 0.00 0.00 0.00 4.57
5631 6023 6.886307 ACAACAACAATTGTGACAAAAGTTG 58.114 32.000 28.63 28.63 44.59 3.16
5634 6026 6.365789 ACAGACAACAACAATTGTGACAAAAG 59.634 34.615 12.82 0.12 44.59 2.27
5784 6176 4.155826 TCAGCAAATGAGAAAATGGTACCG 59.844 41.667 7.57 0.00 32.77 4.02
5936 6328 9.480053 CTCAAATTGAACCATAACAAAGAATGT 57.520 29.630 0.00 0.00 46.82 2.71
5937 6329 9.695526 TCTCAAATTGAACCATAACAAAGAATG 57.304 29.630 0.00 0.00 0.00 2.67
5966 6358 9.717942 ATATGTGATAGAAAAAGTGATCTAGGC 57.282 33.333 0.00 0.00 32.05 3.93
6067 6540 4.275936 CCCTCCTTTTCTAAATGTATGGCG 59.724 45.833 0.00 0.00 0.00 5.69
6577 7050 7.824289 CAGACCATCAAGATTAACTCCAGTAAA 59.176 37.037 0.00 0.00 0.00 2.01
6686 7159 1.623811 GAACCTGGTAAGCTGGACTGA 59.376 52.381 0.00 0.00 0.00 3.41
6850 7323 1.202976 AGCATCACCAAAGCCAGTTCT 60.203 47.619 0.00 0.00 0.00 3.01
6981 7454 3.470709 ACCTATCATTGGAGACATTGCG 58.529 45.455 0.00 0.00 42.32 4.85
7023 7496 1.851304 TTCAATCCCATCCCAGTTGC 58.149 50.000 0.00 0.00 0.00 4.17
7053 7526 4.446994 TTCACAGATGTGCACACAAAAA 57.553 36.364 24.37 9.26 45.41 1.94
7054 7527 4.652421 ATTCACAGATGTGCACACAAAA 57.348 36.364 24.37 11.13 45.41 2.44
7205 7678 6.087555 GCACTTGTAACAACCATAAATGAACG 59.912 38.462 0.00 0.00 0.00 3.95
7241 7714 4.099419 ACCAAAGAAACATGTGGAGAAACC 59.901 41.667 0.00 0.00 35.04 3.27
7285 7773 2.353889 CCATCCTGCAAATTCAGACTCG 59.646 50.000 0.00 0.00 36.19 4.18
7295 7783 1.477553 GGCAAGATCCATCCTGCAAA 58.522 50.000 11.40 0.00 44.10 3.68
7490 7978 5.810587 GTCTACTATTTTCATGTCAAGCGGA 59.189 40.000 0.00 0.00 0.00 5.54
7529 8017 5.105877 ACAGCTATCTCACGTTGCTAGTTTA 60.106 40.000 0.00 0.00 32.29 2.01
7541 8029 3.601443 ACAGGTGAACAGCTATCTCAC 57.399 47.619 11.67 11.67 37.39 3.51
7574 8063 0.321298 TTTGCGGCCTAGGACAGTTC 60.321 55.000 16.92 0.50 0.00 3.01
7601 8093 8.432110 AGTTGACCAAAAACATGTATTTTTCC 57.568 30.769 0.00 0.00 39.25 3.13
7611 8103 8.504812 AAAATTGCTAAGTTGACCAAAAACAT 57.495 26.923 0.00 0.00 0.00 2.71
7642 8134 1.207329 ACCAATCTGACCGGTTAGAGC 59.793 52.381 29.98 9.20 0.00 4.09
7643 8135 3.262420 CAACCAATCTGACCGGTTAGAG 58.738 50.000 29.98 20.39 41.07 2.43
7661 8155 4.518970 TGAGCAAGTGGGATTAAGAACAAC 59.481 41.667 0.00 0.00 0.00 3.32
7681 8175 7.716560 TGGTCCAATAATTCACATGATACTGAG 59.283 37.037 0.00 0.00 0.00 3.35
7684 8178 8.219868 TCATGGTCCAATAATTCACATGATACT 58.780 33.333 0.00 0.00 38.50 2.12
7708 8202 5.570236 GCAGCATCTGGGAATATCTACATCA 60.570 44.000 0.00 0.00 31.21 3.07
7722 8216 1.475169 TATCTCCGGGCAGCATCTGG 61.475 60.000 0.00 0.00 31.21 3.86
7723 8217 0.612229 ATATCTCCGGGCAGCATCTG 59.388 55.000 0.00 0.00 34.12 2.90
7725 8219 1.827969 AGTATATCTCCGGGCAGCATC 59.172 52.381 0.00 0.00 0.00 3.91
7791 8285 8.997621 AGTATACGAAGTGCAGAAAGATAAAA 57.002 30.769 0.00 0.00 45.73 1.52
7843 8337 7.419172 GGTTTTATTAGAGCAGACCATAGGAGT 60.419 40.741 0.00 0.00 0.00 3.85
7847 8341 6.708054 CCAGGTTTTATTAGAGCAGACCATAG 59.292 42.308 0.00 0.00 0.00 2.23
7913 8407 0.947244 CACTGCCACAGGTTCAGAAC 59.053 55.000 4.52 4.52 35.51 3.01
7923 8443 2.986979 CCATGCTGCACTGCCACA 60.987 61.111 3.57 0.00 0.00 4.17
7935 8455 0.889994 TTCCATCAACTGTGCCATGC 59.110 50.000 0.00 0.00 0.00 4.06
7936 8456 2.353011 GGTTTCCATCAACTGTGCCATG 60.353 50.000 0.00 0.00 0.00 3.66
7937 8457 1.895131 GGTTTCCATCAACTGTGCCAT 59.105 47.619 0.00 0.00 0.00 4.40
7938 8458 1.327303 GGTTTCCATCAACTGTGCCA 58.673 50.000 0.00 0.00 0.00 4.92
7955 8475 2.236395 AGCTCGCCTACATAAAACTGGT 59.764 45.455 0.00 0.00 0.00 4.00
7956 8476 2.609459 CAGCTCGCCTACATAAAACTGG 59.391 50.000 0.00 0.00 0.00 4.00
7969 8489 1.439644 CTCCCTAACTCAGCTCGCC 59.560 63.158 0.00 0.00 0.00 5.54
7971 8491 0.684805 ACCCTCCCTAACTCAGCTCG 60.685 60.000 0.00 0.00 0.00 5.03
7982 8502 0.638292 TATTGGACGGTACCCTCCCT 59.362 55.000 22.77 14.50 0.00 4.20
7983 8503 1.046204 CTATTGGACGGTACCCTCCC 58.954 60.000 22.77 14.26 0.00 4.30
7984 8504 1.046204 CCTATTGGACGGTACCCTCC 58.954 60.000 19.94 19.94 34.57 4.30
7985 8505 2.077687 TCCTATTGGACGGTACCCTC 57.922 55.000 6.25 4.13 37.46 4.30
8018 8538 2.392662 TGATCTCTCAGTCATGGTCCC 58.607 52.381 0.00 0.00 0.00 4.46
8019 8539 4.478206 TTTGATCTCTCAGTCATGGTCC 57.522 45.455 0.00 0.00 31.68 4.46
8020 8540 6.998968 ATTTTTGATCTCTCAGTCATGGTC 57.001 37.500 0.00 0.00 31.68 4.02
8021 8541 6.541641 GCTATTTTTGATCTCTCAGTCATGGT 59.458 38.462 0.00 0.00 31.68 3.55
8022 8542 6.766944 AGCTATTTTTGATCTCTCAGTCATGG 59.233 38.462 0.00 0.00 31.68 3.66
8023 8543 7.494952 TCAGCTATTTTTGATCTCTCAGTCATG 59.505 37.037 0.00 0.00 31.68 3.07
8024 8544 7.563020 TCAGCTATTTTTGATCTCTCAGTCAT 58.437 34.615 0.00 0.00 31.68 3.06
8025 8545 6.939622 TCAGCTATTTTTGATCTCTCAGTCA 58.060 36.000 0.00 0.00 31.68 3.41
8026 8546 6.479660 CCTCAGCTATTTTTGATCTCTCAGTC 59.520 42.308 0.00 0.00 31.68 3.51
8027 8547 6.155910 TCCTCAGCTATTTTTGATCTCTCAGT 59.844 38.462 0.00 0.00 31.68 3.41
8028 8548 6.580788 TCCTCAGCTATTTTTGATCTCTCAG 58.419 40.000 0.00 0.00 31.68 3.35
8029 8549 6.550938 TCCTCAGCTATTTTTGATCTCTCA 57.449 37.500 0.00 0.00 0.00 3.27
8030 8550 7.714377 TCAATCCTCAGCTATTTTTGATCTCTC 59.286 37.037 0.00 0.00 0.00 3.20
8031 8551 7.571919 TCAATCCTCAGCTATTTTTGATCTCT 58.428 34.615 0.00 0.00 0.00 3.10
8032 8552 7.798596 TCAATCCTCAGCTATTTTTGATCTC 57.201 36.000 0.00 0.00 0.00 2.75
8033 8553 8.585471 TTTCAATCCTCAGCTATTTTTGATCT 57.415 30.769 0.00 0.00 0.00 2.75
8034 8554 9.643693 TTTTTCAATCCTCAGCTATTTTTGATC 57.356 29.630 0.00 0.00 0.00 2.92
8036 8556 9.426837 CATTTTTCAATCCTCAGCTATTTTTGA 57.573 29.630 0.00 0.00 0.00 2.69
8037 8557 8.662141 CCATTTTTCAATCCTCAGCTATTTTTG 58.338 33.333 0.00 0.00 0.00 2.44
8038 8558 8.377799 ACCATTTTTCAATCCTCAGCTATTTTT 58.622 29.630 0.00 0.00 0.00 1.94
8039 8559 7.910584 ACCATTTTTCAATCCTCAGCTATTTT 58.089 30.769 0.00 0.00 0.00 1.82
8040 8560 7.486407 ACCATTTTTCAATCCTCAGCTATTT 57.514 32.000 0.00 0.00 0.00 1.40
8041 8561 7.178983 TGAACCATTTTTCAATCCTCAGCTATT 59.821 33.333 0.00 0.00 32.42 1.73
8042 8562 6.664816 TGAACCATTTTTCAATCCTCAGCTAT 59.335 34.615 0.00 0.00 32.42 2.97
8043 8563 6.009589 TGAACCATTTTTCAATCCTCAGCTA 58.990 36.000 0.00 0.00 32.42 3.32
8044 8564 4.834496 TGAACCATTTTTCAATCCTCAGCT 59.166 37.500 0.00 0.00 32.42 4.24
8045 8565 5.138125 TGAACCATTTTTCAATCCTCAGC 57.862 39.130 0.00 0.00 32.42 4.26
8046 8566 6.016024 TCACTGAACCATTTTTCAATCCTCAG 60.016 38.462 0.00 0.00 35.07 3.35
8047 8567 5.832595 TCACTGAACCATTTTTCAATCCTCA 59.167 36.000 0.00 0.00 35.07 3.86
8048 8568 6.331369 TCACTGAACCATTTTTCAATCCTC 57.669 37.500 0.00 0.00 35.07 3.71
8049 8569 5.279156 GCTCACTGAACCATTTTTCAATCCT 60.279 40.000 0.00 0.00 35.07 3.24
8050 8570 4.925646 GCTCACTGAACCATTTTTCAATCC 59.074 41.667 0.00 0.00 35.07 3.01
8051 8571 5.776744 AGCTCACTGAACCATTTTTCAATC 58.223 37.500 0.00 0.00 35.07 2.67
8052 8572 5.796424 AGCTCACTGAACCATTTTTCAAT 57.204 34.783 0.00 0.00 35.07 2.57
8053 8573 6.061441 TCTAGCTCACTGAACCATTTTTCAA 58.939 36.000 0.00 0.00 35.07 2.69
8054 8574 5.620206 TCTAGCTCACTGAACCATTTTTCA 58.380 37.500 0.00 0.00 34.30 2.69
8055 8575 6.183360 GGATCTAGCTCACTGAACCATTTTTC 60.183 42.308 0.00 0.00 0.00 2.29
8056 8576 5.649831 GGATCTAGCTCACTGAACCATTTTT 59.350 40.000 0.00 0.00 0.00 1.94
8057 8577 5.189180 GGATCTAGCTCACTGAACCATTTT 58.811 41.667 0.00 0.00 0.00 1.82
8058 8578 4.384647 GGGATCTAGCTCACTGAACCATTT 60.385 45.833 0.00 0.00 0.00 2.32
8059 8579 3.135530 GGGATCTAGCTCACTGAACCATT 59.864 47.826 0.00 0.00 0.00 3.16
8060 8580 2.703007 GGGATCTAGCTCACTGAACCAT 59.297 50.000 0.00 0.00 0.00 3.55
8061 8581 2.111384 GGGATCTAGCTCACTGAACCA 58.889 52.381 0.00 0.00 0.00 3.67
8062 8582 2.111384 TGGGATCTAGCTCACTGAACC 58.889 52.381 0.00 0.00 0.00 3.62
8063 8583 4.414337 AATGGGATCTAGCTCACTGAAC 57.586 45.455 0.00 0.00 0.00 3.18
8064 8584 4.471025 TGAAATGGGATCTAGCTCACTGAA 59.529 41.667 0.00 0.00 0.00 3.02
8065 8585 4.033009 TGAAATGGGATCTAGCTCACTGA 58.967 43.478 0.00 0.00 0.00 3.41
8066 8586 4.100653 TCTGAAATGGGATCTAGCTCACTG 59.899 45.833 0.00 0.00 0.00 3.66
8067 8587 4.293494 TCTGAAATGGGATCTAGCTCACT 58.707 43.478 0.00 0.00 0.00 3.41
8068 8588 4.679373 TCTGAAATGGGATCTAGCTCAC 57.321 45.455 0.00 0.00 0.00 3.51
8069 8589 5.698741 TTTCTGAAATGGGATCTAGCTCA 57.301 39.130 0.00 0.00 0.00 4.26
8070 8590 6.968250 CATTTTCTGAAATGGGATCTAGCTC 58.032 40.000 3.31 0.00 45.37 4.09
8071 8591 6.956202 CATTTTCTGAAATGGGATCTAGCT 57.044 37.500 3.31 0.00 45.37 3.32
8082 8602 4.154918 GCTGACCTCGTCATTTTCTGAAAT 59.845 41.667 3.31 0.00 41.94 2.17
8083 8603 3.498397 GCTGACCTCGTCATTTTCTGAAA 59.502 43.478 0.00 0.00 41.94 2.69
8084 8604 3.067106 GCTGACCTCGTCATTTTCTGAA 58.933 45.455 0.00 0.00 41.94 3.02
8085 8605 2.300152 AGCTGACCTCGTCATTTTCTGA 59.700 45.455 0.00 0.00 41.94 3.27
8086 8606 2.670414 GAGCTGACCTCGTCATTTTCTG 59.330 50.000 0.00 0.00 41.94 3.02
8087 8607 2.564947 AGAGCTGACCTCGTCATTTTCT 59.435 45.455 0.00 0.00 45.54 2.52
8088 8608 2.966050 AGAGCTGACCTCGTCATTTTC 58.034 47.619 0.00 0.00 45.54 2.29
8089 8609 3.409026 AAGAGCTGACCTCGTCATTTT 57.591 42.857 0.00 0.00 45.54 1.82
8090 8610 4.744795 ATAAGAGCTGACCTCGTCATTT 57.255 40.909 0.00 0.00 45.54 2.32
8091 8611 4.744795 AATAAGAGCTGACCTCGTCATT 57.255 40.909 0.00 0.00 45.54 2.57
8092 8612 4.744795 AAATAAGAGCTGACCTCGTCAT 57.255 40.909 0.00 0.00 45.54 3.06
8093 8613 4.461431 TGTAAATAAGAGCTGACCTCGTCA 59.539 41.667 0.00 0.00 45.54 4.35
8094 8614 4.995124 TGTAAATAAGAGCTGACCTCGTC 58.005 43.478 0.00 0.00 45.54 4.20
8095 8615 5.599999 ATGTAAATAAGAGCTGACCTCGT 57.400 39.130 0.00 0.00 45.54 4.18
8096 8616 8.297426 TGTATATGTAAATAAGAGCTGACCTCG 58.703 37.037 0.00 0.00 45.54 4.63
8097 8617 9.982651 TTGTATATGTAAATAAGAGCTGACCTC 57.017 33.333 0.00 0.00 41.07 3.85
8124 8644 6.870971 AGCTGACAAATGATTGCAATTTTT 57.129 29.167 14.33 13.41 40.34 1.94
8125 8645 6.293735 CCAAGCTGACAAATGATTGCAATTTT 60.294 34.615 14.33 8.31 40.34 1.82
8126 8646 5.180492 CCAAGCTGACAAATGATTGCAATTT 59.820 36.000 14.33 1.55 40.34 1.82
8127 8647 4.693566 CCAAGCTGACAAATGATTGCAATT 59.306 37.500 14.33 0.00 40.34 2.32
8128 8648 4.250464 CCAAGCTGACAAATGATTGCAAT 58.750 39.130 12.83 12.83 40.34 3.56
8129 8649 3.555377 CCCAAGCTGACAAATGATTGCAA 60.555 43.478 0.00 0.00 40.34 4.08
8130 8650 2.028839 CCCAAGCTGACAAATGATTGCA 60.029 45.455 0.00 0.00 40.34 4.08
8131 8651 2.231964 TCCCAAGCTGACAAATGATTGC 59.768 45.455 0.00 0.00 40.34 3.56
8132 8652 4.524316 TTCCCAAGCTGACAAATGATTG 57.476 40.909 0.00 0.00 42.46 2.67
8133 8653 5.070847 ACTTTTCCCAAGCTGACAAATGATT 59.929 36.000 0.00 0.00 0.00 2.57
8134 8654 4.590222 ACTTTTCCCAAGCTGACAAATGAT 59.410 37.500 0.00 0.00 0.00 2.45
8135 8655 3.960102 ACTTTTCCCAAGCTGACAAATGA 59.040 39.130 0.00 0.00 0.00 2.57
8136 8656 4.326504 ACTTTTCCCAAGCTGACAAATG 57.673 40.909 0.00 0.00 0.00 2.32
8137 8657 5.221441 GGTAACTTTTCCCAAGCTGACAAAT 60.221 40.000 0.00 0.00 0.00 2.32
8138 8658 4.098807 GGTAACTTTTCCCAAGCTGACAAA 59.901 41.667 0.00 0.00 0.00 2.83
8139 8659 3.634910 GGTAACTTTTCCCAAGCTGACAA 59.365 43.478 0.00 0.00 0.00 3.18
8140 8660 3.219281 GGTAACTTTTCCCAAGCTGACA 58.781 45.455 0.00 0.00 0.00 3.58
8141 8661 2.225727 CGGTAACTTTTCCCAAGCTGAC 59.774 50.000 0.00 0.00 0.00 3.51
8142 8662 2.500229 CGGTAACTTTTCCCAAGCTGA 58.500 47.619 0.00 0.00 0.00 4.26
8143 8663 1.068541 GCGGTAACTTTTCCCAAGCTG 60.069 52.381 0.00 0.00 0.00 4.24
8144 8664 1.244816 GCGGTAACTTTTCCCAAGCT 58.755 50.000 0.00 0.00 0.00 3.74
8145 8665 0.955905 TGCGGTAACTTTTCCCAAGC 59.044 50.000 0.00 0.00 0.00 4.01
8146 8666 1.950909 TGTGCGGTAACTTTTCCCAAG 59.049 47.619 0.00 0.00 0.00 3.61
8147 8667 2.054232 TGTGCGGTAACTTTTCCCAA 57.946 45.000 0.00 0.00 0.00 4.12
8148 8668 2.279935 ATGTGCGGTAACTTTTCCCA 57.720 45.000 0.00 0.00 0.00 4.37
8149 8669 3.243602 ACAAATGTGCGGTAACTTTTCCC 60.244 43.478 0.00 0.00 0.00 3.97
8150 8670 3.972403 ACAAATGTGCGGTAACTTTTCC 58.028 40.909 0.00 0.00 0.00 3.13
8151 8671 4.855531 AGACAAATGTGCGGTAACTTTTC 58.144 39.130 0.00 0.00 0.00 2.29
8152 8672 4.911514 AGACAAATGTGCGGTAACTTTT 57.088 36.364 0.00 0.00 0.00 2.27
8153 8673 5.302360 TCTAGACAAATGTGCGGTAACTTT 58.698 37.500 0.00 0.00 0.00 2.66
8154 8674 4.890088 TCTAGACAAATGTGCGGTAACTT 58.110 39.130 0.00 0.00 0.00 2.66
8155 8675 4.530710 TCTAGACAAATGTGCGGTAACT 57.469 40.909 0.00 0.00 0.00 2.24
8156 8676 5.796350 ATTCTAGACAAATGTGCGGTAAC 57.204 39.130 0.00 0.00 0.00 2.50
8157 8677 7.324935 TCTTATTCTAGACAAATGTGCGGTAA 58.675 34.615 0.00 0.00 0.00 2.85
8158 8678 6.869695 TCTTATTCTAGACAAATGTGCGGTA 58.130 36.000 0.00 0.00 0.00 4.02
8159 8679 5.730550 TCTTATTCTAGACAAATGTGCGGT 58.269 37.500 0.00 0.00 0.00 5.68
8160 8680 6.662414 TTCTTATTCTAGACAAATGTGCGG 57.338 37.500 0.00 0.00 0.00 5.69
8161 8681 7.478667 GTGTTTCTTATTCTAGACAAATGTGCG 59.521 37.037 0.00 0.00 0.00 5.34
8162 8682 7.750903 GGTGTTTCTTATTCTAGACAAATGTGC 59.249 37.037 0.00 0.00 0.00 4.57
8163 8683 8.783093 TGGTGTTTCTTATTCTAGACAAATGTG 58.217 33.333 0.00 0.00 0.00 3.21
8164 8684 8.918202 TGGTGTTTCTTATTCTAGACAAATGT 57.082 30.769 0.00 0.00 0.00 2.71
8165 8685 9.612620 GTTGGTGTTTCTTATTCTAGACAAATG 57.387 33.333 0.00 0.00 0.00 2.32
8166 8686 9.574516 AGTTGGTGTTTCTTATTCTAGACAAAT 57.425 29.630 0.00 0.00 0.00 2.32
8167 8687 8.974060 AGTTGGTGTTTCTTATTCTAGACAAA 57.026 30.769 0.00 0.00 0.00 2.83
8168 8688 8.836413 CAAGTTGGTGTTTCTTATTCTAGACAA 58.164 33.333 0.00 0.00 0.00 3.18
8169 8689 8.208224 TCAAGTTGGTGTTTCTTATTCTAGACA 58.792 33.333 2.34 0.00 0.00 3.41
8170 8690 8.603242 TCAAGTTGGTGTTTCTTATTCTAGAC 57.397 34.615 2.34 0.00 0.00 2.59
8200 8720 6.530181 CGAAAAAGGTTACTGCAAGAGTTTTT 59.470 34.615 0.00 0.00 37.43 1.94
8201 8721 6.033966 CGAAAAAGGTTACTGCAAGAGTTTT 58.966 36.000 0.00 0.00 37.43 2.43
8202 8722 5.449999 CCGAAAAAGGTTACTGCAAGAGTTT 60.450 40.000 0.00 0.00 37.43 2.66
8203 8723 4.036380 CCGAAAAAGGTTACTGCAAGAGTT 59.964 41.667 0.00 0.00 37.43 3.01
8204 8724 3.564225 CCGAAAAAGGTTACTGCAAGAGT 59.436 43.478 0.00 0.00 37.43 3.24
8205 8725 3.564225 ACCGAAAAAGGTTACTGCAAGAG 59.436 43.478 0.00 0.00 43.00 2.85
8206 8726 3.314080 CACCGAAAAAGGTTACTGCAAGA 59.686 43.478 0.00 0.00 43.00 3.02
8207 8727 3.550030 CCACCGAAAAAGGTTACTGCAAG 60.550 47.826 0.00 0.00 43.00 4.01
8208 8728 2.359531 CCACCGAAAAAGGTTACTGCAA 59.640 45.455 0.00 0.00 43.00 4.08
8209 8729 1.950909 CCACCGAAAAAGGTTACTGCA 59.049 47.619 0.00 0.00 43.00 4.41
8210 8730 2.223745 TCCACCGAAAAAGGTTACTGC 58.776 47.619 0.00 0.00 43.00 4.40
8211 8731 4.904253 TTTCCACCGAAAAAGGTTACTG 57.096 40.909 0.00 0.00 43.00 2.74
8212 8732 4.951715 AGTTTTCCACCGAAAAAGGTTACT 59.048 37.500 0.00 0.00 46.76 2.24
8213 8733 5.252969 AGTTTTCCACCGAAAAAGGTTAC 57.747 39.130 0.00 0.00 46.76 2.50
8214 8734 5.652518 CAAGTTTTCCACCGAAAAAGGTTA 58.347 37.500 0.00 0.00 46.76 2.85
8215 8735 4.500127 CAAGTTTTCCACCGAAAAAGGTT 58.500 39.130 0.00 0.00 46.76 3.50
8216 8736 3.677700 GCAAGTTTTCCACCGAAAAAGGT 60.678 43.478 0.00 0.00 46.76 3.50
8217 8737 2.863740 GCAAGTTTTCCACCGAAAAAGG 59.136 45.455 0.00 0.00 46.76 3.11
8218 8738 3.516615 TGCAAGTTTTCCACCGAAAAAG 58.483 40.909 0.00 0.00 46.76 2.27
8219 8739 3.516615 CTGCAAGTTTTCCACCGAAAAA 58.483 40.909 0.00 0.00 46.76 1.94
8220 8740 3.157932 CTGCAAGTTTTCCACCGAAAA 57.842 42.857 0.00 0.00 43.97 2.29
8221 8741 2.861462 CTGCAAGTTTTCCACCGAAA 57.139 45.000 0.00 0.00 36.18 3.46
8259 8779 1.497286 TGTGGTTTTGGGCTTAGAGGT 59.503 47.619 0.00 0.00 0.00 3.85
8269 8789 9.981114 GGGAGATATAATTATTTGTGGTTTTGG 57.019 33.333 2.68 0.00 0.00 3.28
8292 8812 5.085920 ACATCAATGTGAAATTTGGAGGGA 58.914 37.500 0.00 0.00 40.03 4.20
8347 8867 4.484236 CAACGCAAAGAATCATGCCTTAA 58.516 39.130 5.65 0.00 39.39 1.85
8362 8882 3.358775 GCATTCGTATTATGCAACGCAA 58.641 40.909 3.79 1.00 45.93 4.85
8370 8890 7.697691 ACTCAAGGAAAAGCATTCGTATTATG 58.302 34.615 0.00 0.00 0.00 1.90
8371 8891 7.865706 ACTCAAGGAAAAGCATTCGTATTAT 57.134 32.000 0.00 0.00 0.00 1.28
8372 8892 8.958119 ATACTCAAGGAAAAGCATTCGTATTA 57.042 30.769 0.00 0.00 0.00 0.98
8373 8893 7.865706 ATACTCAAGGAAAAGCATTCGTATT 57.134 32.000 0.00 0.00 0.00 1.89
8374 8894 7.865706 AATACTCAAGGAAAAGCATTCGTAT 57.134 32.000 0.00 0.00 0.00 3.06
8375 8895 7.174253 ACAAATACTCAAGGAAAAGCATTCGTA 59.826 33.333 0.00 0.00 0.00 3.43
8428 8954 8.792830 TCAAGCAAGAAAAGTACAATAGCTAT 57.207 30.769 0.00 0.00 0.00 2.97
8449 8975 2.084610 TCACGGACAGCTTCATCAAG 57.915 50.000 0.00 0.00 0.00 3.02
8450 8976 2.349590 CATCACGGACAGCTTCATCAA 58.650 47.619 0.00 0.00 0.00 2.57
8451 8977 2.008543 GCATCACGGACAGCTTCATCA 61.009 52.381 0.00 0.00 0.00 3.07
8452 8978 0.654683 GCATCACGGACAGCTTCATC 59.345 55.000 0.00 0.00 0.00 2.92
8453 8979 0.036105 TGCATCACGGACAGCTTCAT 60.036 50.000 0.00 0.00 0.00 2.57
8454 8980 0.036105 ATGCATCACGGACAGCTTCA 60.036 50.000 0.00 0.00 0.00 3.02
8455 8981 0.376152 CATGCATCACGGACAGCTTC 59.624 55.000 0.00 0.00 0.00 3.86
8459 8985 2.679336 TCAAATCATGCATCACGGACAG 59.321 45.455 0.00 0.00 0.00 3.51
8462 8988 3.489568 GCATTCAAATCATGCATCACGGA 60.490 43.478 0.00 0.00 45.50 4.69
8488 9014 3.365472 ACCCAAGTCTTAATCCATTGGC 58.635 45.455 0.00 0.00 39.26 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.