Multiple sequence alignment - TraesCS6A01G322000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G322000 chr6A 100.000 2507 0 0 1 2507 556033279 556035785 0.000000e+00 4630.0
1 TraesCS6A01G322000 chr6D 89.017 1566 63 44 381 1902 411466798 411468298 0.000000e+00 1838.0
2 TraesCS6A01G322000 chr6D 87.166 374 34 7 1 361 411419302 411419674 1.790000e-111 412.0
3 TraesCS6A01G322000 chr6D 88.750 240 9 6 1989 2210 411468287 411468526 6.830000e-71 278.0
4 TraesCS6A01G322000 chr6D 98.101 158 3 0 2344 2501 411468648 411468805 2.460000e-70 276.0
5 TraesCS6A01G322000 chr6D 97.727 44 1 0 2168 2211 411487557 411487600 2.670000e-10 76.8
6 TraesCS6A01G322000 chr6B 89.870 1303 74 31 615 1903 618666356 618667614 0.000000e+00 1622.0
7 TraesCS6A01G322000 chr6B 89.409 491 38 7 2028 2507 618667621 618668108 7.670000e-170 606.0
8 TraesCS6A01G322000 chr6B 80.603 232 41 4 12 240 618660063 618660293 2.560000e-40 176.0
9 TraesCS6A01G322000 chr6B 93.750 80 4 1 2420 2499 618859079 618859157 4.380000e-23 119.0
10 TraesCS6A01G322000 chr6B 87.302 63 6 2 70 131 85111608 85111547 1.240000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G322000 chr6A 556033279 556035785 2506 False 4630.000000 4630 100.0000 1 2507 1 chr6A.!!$F1 2506
1 TraesCS6A01G322000 chr6D 411466798 411468805 2007 False 797.333333 1838 91.9560 381 2501 3 chr6D.!!$F3 2120
2 TraesCS6A01G322000 chr6B 618666356 618668108 1752 False 1114.000000 1622 89.6395 615 2507 2 chr6B.!!$F3 1892

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.03213 GCTTCATATCGAGCCCGTGA 59.968 55.0 0.0 0.0 37.05 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 1943 0.183492 TGGACATAAGCAGATGGGGC 59.817 55.0 3.26 0.0 0.0 5.8 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.336131 CTAGCAGAGGAGCCATAGCA 58.664 55.000 0.00 0.00 43.56 3.49
20 21 1.690893 CTAGCAGAGGAGCCATAGCAA 59.309 52.381 0.00 0.00 43.56 3.91
21 22 0.179936 AGCAGAGGAGCCATAGCAAC 59.820 55.000 0.00 0.00 43.56 4.17
22 23 0.817229 GCAGAGGAGCCATAGCAACC 60.817 60.000 0.00 0.00 43.56 3.77
23 24 0.531532 CAGAGGAGCCATAGCAACCG 60.532 60.000 0.00 0.00 43.56 4.44
24 25 0.978146 AGAGGAGCCATAGCAACCGT 60.978 55.000 0.00 0.00 43.56 4.83
25 26 0.530870 GAGGAGCCATAGCAACCGTC 60.531 60.000 0.00 0.00 43.56 4.79
26 27 1.220749 GGAGCCATAGCAACCGTCA 59.779 57.895 0.00 0.00 43.56 4.35
27 28 1.090052 GGAGCCATAGCAACCGTCAC 61.090 60.000 0.00 0.00 43.56 3.67
28 29 0.108138 GAGCCATAGCAACCGTCACT 60.108 55.000 0.00 0.00 43.56 3.41
29 30 0.108138 AGCCATAGCAACCGTCACTC 60.108 55.000 0.00 0.00 43.56 3.51
30 31 0.108138 GCCATAGCAACCGTCACTCT 60.108 55.000 0.00 0.00 39.53 3.24
31 32 1.645034 CCATAGCAACCGTCACTCTG 58.355 55.000 0.00 0.00 0.00 3.35
32 33 1.204704 CCATAGCAACCGTCACTCTGA 59.795 52.381 0.00 0.00 0.00 3.27
33 34 2.263077 CATAGCAACCGTCACTCTGAC 58.737 52.381 0.00 0.00 43.65 3.51
43 44 1.457303 GTCACTCTGACGATTGTGTGC 59.543 52.381 0.00 0.00 37.67 4.57
44 45 0.792640 CACTCTGACGATTGTGTGCC 59.207 55.000 0.00 0.00 0.00 5.01
45 46 0.392706 ACTCTGACGATTGTGTGCCA 59.607 50.000 0.00 0.00 0.00 4.92
46 47 1.202639 ACTCTGACGATTGTGTGCCAA 60.203 47.619 0.00 0.00 37.49 4.52
47 48 1.872952 CTCTGACGATTGTGTGCCAAA 59.127 47.619 0.00 0.00 36.44 3.28
48 49 2.290367 CTCTGACGATTGTGTGCCAAAA 59.710 45.455 0.00 0.00 36.44 2.44
49 50 2.884012 TCTGACGATTGTGTGCCAAAAT 59.116 40.909 0.00 0.00 36.44 1.82
50 51 2.981805 CTGACGATTGTGTGCCAAAATG 59.018 45.455 0.00 0.00 36.44 2.32
51 52 2.620585 TGACGATTGTGTGCCAAAATGA 59.379 40.909 0.00 0.00 36.44 2.57
52 53 2.979813 GACGATTGTGTGCCAAAATGAC 59.020 45.455 0.00 0.00 36.44 3.06
53 54 2.360483 ACGATTGTGTGCCAAAATGACA 59.640 40.909 0.00 0.00 36.44 3.58
54 55 2.725723 CGATTGTGTGCCAAAATGACAC 59.274 45.455 0.00 0.00 40.38 3.67
55 56 3.550639 CGATTGTGTGCCAAAATGACACT 60.551 43.478 0.00 0.00 40.57 3.55
56 57 3.883830 TTGTGTGCCAAAATGACACTT 57.116 38.095 0.00 0.00 40.57 3.16
57 58 3.883830 TGTGTGCCAAAATGACACTTT 57.116 38.095 0.00 0.00 40.57 2.66
58 59 4.991153 TGTGTGCCAAAATGACACTTTA 57.009 36.364 0.00 0.00 40.57 1.85
59 60 4.930963 TGTGTGCCAAAATGACACTTTAG 58.069 39.130 0.00 0.00 40.57 1.85
60 61 3.735746 GTGTGCCAAAATGACACTTTAGC 59.264 43.478 0.00 0.00 37.58 3.09
61 62 3.382865 TGTGCCAAAATGACACTTTAGCA 59.617 39.130 0.00 0.00 35.33 3.49
62 63 4.039004 TGTGCCAAAATGACACTTTAGCAT 59.961 37.500 5.81 0.00 33.07 3.79
63 64 5.242615 TGTGCCAAAATGACACTTTAGCATA 59.757 36.000 5.81 0.86 33.07 3.14
64 65 6.155827 GTGCCAAAATGACACTTTAGCATAA 58.844 36.000 5.81 0.00 33.07 1.90
65 66 6.813152 GTGCCAAAATGACACTTTAGCATAAT 59.187 34.615 5.81 0.00 33.07 1.28
66 67 7.331687 GTGCCAAAATGACACTTTAGCATAATT 59.668 33.333 5.81 0.00 33.07 1.40
67 68 7.331440 TGCCAAAATGACACTTTAGCATAATTG 59.669 33.333 0.00 0.00 0.00 2.32
84 85 7.538575 GCATAATTGCCATAACTTATGTAGGG 58.461 38.462 7.81 0.00 43.38 3.53
85 86 7.538575 CATAATTGCCATAACTTATGTAGGGC 58.461 38.462 7.81 0.33 37.32 5.19
86 87 3.120321 TGCCATAACTTATGTAGGGCG 57.880 47.619 7.81 0.00 38.66 6.13
87 88 1.804748 GCCATAACTTATGTAGGGCGC 59.195 52.381 0.00 0.00 34.36 6.53
88 89 2.550208 GCCATAACTTATGTAGGGCGCT 60.550 50.000 7.64 8.86 34.36 5.92
89 90 3.740115 CCATAACTTATGTAGGGCGCTT 58.260 45.455 9.23 0.00 34.36 4.68
90 91 3.746492 CCATAACTTATGTAGGGCGCTTC 59.254 47.826 9.23 4.16 34.36 3.86
91 92 4.377021 CATAACTTATGTAGGGCGCTTCA 58.623 43.478 9.23 11.05 0.00 3.02
92 93 3.560636 AACTTATGTAGGGCGCTTCAT 57.439 42.857 22.99 22.99 0.00 2.57
93 94 4.682778 AACTTATGTAGGGCGCTTCATA 57.317 40.909 21.20 21.20 0.00 2.15
94 95 4.891992 ACTTATGTAGGGCGCTTCATAT 57.108 40.909 24.17 12.36 0.00 1.78
95 96 4.822026 ACTTATGTAGGGCGCTTCATATC 58.178 43.478 24.17 5.31 0.00 1.63
96 97 2.370281 ATGTAGGGCGCTTCATATCG 57.630 50.000 19.21 0.00 0.00 2.92
97 98 1.324383 TGTAGGGCGCTTCATATCGA 58.676 50.000 9.23 0.00 0.00 3.59
98 99 1.269723 TGTAGGGCGCTTCATATCGAG 59.730 52.381 9.23 0.00 0.00 4.04
99 100 0.243907 TAGGGCGCTTCATATCGAGC 59.756 55.000 9.23 0.00 0.00 5.03
100 101 2.029844 GGGCGCTTCATATCGAGCC 61.030 63.158 7.64 0.00 44.11 4.70
101 102 2.029844 GGCGCTTCATATCGAGCCC 61.030 63.158 7.64 1.68 39.77 5.19
102 103 2.375766 GCGCTTCATATCGAGCCCG 61.376 63.158 0.00 0.00 37.07 6.13
103 104 1.007271 CGCTTCATATCGAGCCCGT 60.007 57.895 0.00 0.00 37.05 5.28
104 105 1.278172 CGCTTCATATCGAGCCCGTG 61.278 60.000 0.00 0.00 37.05 4.94
105 106 0.032130 GCTTCATATCGAGCCCGTGA 59.968 55.000 0.00 0.00 37.05 4.35
106 107 1.932604 GCTTCATATCGAGCCCGTGAG 60.933 57.143 0.00 0.00 37.05 3.51
107 108 0.032130 TTCATATCGAGCCCGTGAGC 59.968 55.000 0.00 0.00 37.05 4.26
108 109 1.373497 CATATCGAGCCCGTGAGCC 60.373 63.158 0.00 0.00 37.05 4.70
109 110 1.531840 ATATCGAGCCCGTGAGCCT 60.532 57.895 0.00 0.00 37.05 4.58
110 111 1.528292 ATATCGAGCCCGTGAGCCTC 61.528 60.000 0.00 0.00 37.05 4.70
113 114 3.474570 GAGCCCGTGAGCCTCCAT 61.475 66.667 0.00 0.00 0.00 3.41
114 115 2.041922 AGCCCGTGAGCCTCCATA 60.042 61.111 0.00 0.00 0.00 2.74
115 116 1.460305 AGCCCGTGAGCCTCCATAT 60.460 57.895 0.00 0.00 0.00 1.78
116 117 1.056700 AGCCCGTGAGCCTCCATATT 61.057 55.000 0.00 0.00 0.00 1.28
117 118 0.179018 GCCCGTGAGCCTCCATATTT 60.179 55.000 0.00 0.00 0.00 1.40
118 119 1.597742 CCCGTGAGCCTCCATATTTG 58.402 55.000 0.00 0.00 0.00 2.32
119 120 1.597742 CCGTGAGCCTCCATATTTGG 58.402 55.000 0.00 0.00 45.15 3.28
130 131 3.100207 CCATATTTGGAGGTTGTGGGT 57.900 47.619 0.00 0.00 46.92 4.51
131 132 3.440127 CCATATTTGGAGGTTGTGGGTT 58.560 45.455 0.00 0.00 46.92 4.11
132 133 3.837731 CCATATTTGGAGGTTGTGGGTTT 59.162 43.478 0.00 0.00 46.92 3.27
133 134 4.285775 CCATATTTGGAGGTTGTGGGTTTT 59.714 41.667 0.00 0.00 46.92 2.43
134 135 3.836365 ATTTGGAGGTTGTGGGTTTTG 57.164 42.857 0.00 0.00 0.00 2.44
135 136 1.490574 TTGGAGGTTGTGGGTTTTGG 58.509 50.000 0.00 0.00 0.00 3.28
136 137 1.045911 TGGAGGTTGTGGGTTTTGGC 61.046 55.000 0.00 0.00 0.00 4.52
137 138 1.745890 GAGGTTGTGGGTTTTGGCC 59.254 57.895 0.00 0.00 0.00 5.36
138 139 0.759060 GAGGTTGTGGGTTTTGGCCT 60.759 55.000 3.32 0.00 0.00 5.19
139 140 0.759060 AGGTTGTGGGTTTTGGCCTC 60.759 55.000 3.32 0.00 0.00 4.70
140 141 1.362355 GTTGTGGGTTTTGGCCTCG 59.638 57.895 3.32 0.00 0.00 4.63
141 142 1.104577 GTTGTGGGTTTTGGCCTCGA 61.105 55.000 3.32 0.00 0.00 4.04
142 143 0.821711 TTGTGGGTTTTGGCCTCGAG 60.822 55.000 5.13 5.13 0.00 4.04
143 144 2.282180 TGGGTTTTGGCCTCGAGC 60.282 61.111 6.99 2.33 42.60 5.03
144 145 2.282180 GGGTTTTGGCCTCGAGCA 60.282 61.111 6.99 0.00 46.50 4.26
145 146 2.626780 GGGTTTTGGCCTCGAGCAC 61.627 63.158 6.99 1.95 46.50 4.40
146 147 1.896660 GGTTTTGGCCTCGAGCACA 60.897 57.895 6.99 4.95 46.50 4.57
147 148 1.282875 GTTTTGGCCTCGAGCACAC 59.717 57.895 6.99 0.00 46.50 3.82
148 149 1.896660 TTTTGGCCTCGAGCACACC 60.897 57.895 6.99 6.00 46.50 4.16
149 150 3.842925 TTTGGCCTCGAGCACACCC 62.843 63.158 6.99 2.31 46.50 4.61
152 153 4.101448 GCCTCGAGCACACCCCAT 62.101 66.667 6.99 0.00 42.97 4.00
153 154 2.187946 CCTCGAGCACACCCCATC 59.812 66.667 6.99 0.00 0.00 3.51
154 155 2.187946 CTCGAGCACACCCCATCC 59.812 66.667 0.00 0.00 0.00 3.51
155 156 2.606213 TCGAGCACACCCCATCCA 60.606 61.111 0.00 0.00 0.00 3.41
156 157 2.436646 CGAGCACACCCCATCCAC 60.437 66.667 0.00 0.00 0.00 4.02
157 158 2.044946 GAGCACACCCCATCCACC 60.045 66.667 0.00 0.00 0.00 4.61
158 159 2.858476 AGCACACCCCATCCACCA 60.858 61.111 0.00 0.00 0.00 4.17
159 160 2.361610 GCACACCCCATCCACCAG 60.362 66.667 0.00 0.00 0.00 4.00
160 161 2.361610 CACACCCCATCCACCAGC 60.362 66.667 0.00 0.00 0.00 4.85
161 162 3.661648 ACACCCCATCCACCAGCC 61.662 66.667 0.00 0.00 0.00 4.85
162 163 3.660571 CACCCCATCCACCAGCCA 61.661 66.667 0.00 0.00 0.00 4.75
163 164 3.661648 ACCCCATCCACCAGCCAC 61.662 66.667 0.00 0.00 0.00 5.01
164 165 3.341629 CCCCATCCACCAGCCACT 61.342 66.667 0.00 0.00 0.00 4.00
165 166 2.273449 CCCATCCACCAGCCACTC 59.727 66.667 0.00 0.00 0.00 3.51
166 167 2.304056 CCCATCCACCAGCCACTCT 61.304 63.158 0.00 0.00 0.00 3.24
167 168 1.687612 CCATCCACCAGCCACTCTT 59.312 57.895 0.00 0.00 0.00 2.85
168 169 0.679002 CCATCCACCAGCCACTCTTG 60.679 60.000 0.00 0.00 0.00 3.02
169 170 1.001641 ATCCACCAGCCACTCTTGC 60.002 57.895 0.00 0.00 0.00 4.01
170 171 2.809861 ATCCACCAGCCACTCTTGCG 62.810 60.000 0.00 0.00 0.00 4.85
171 172 3.052082 CACCAGCCACTCTTGCGG 61.052 66.667 0.00 0.00 0.00 5.69
173 174 4.020617 CCAGCCACTCTTGCGGGA 62.021 66.667 0.00 0.00 45.52 5.14
174 175 2.435586 CAGCCACTCTTGCGGGAG 60.436 66.667 4.50 4.50 39.09 4.30
175 176 2.604686 AGCCACTCTTGCGGGAGA 60.605 61.111 11.82 0.00 37.13 3.71
176 177 2.217038 AGCCACTCTTGCGGGAGAA 61.217 57.895 11.82 0.00 37.13 2.87
177 178 1.302511 GCCACTCTTGCGGGAGAAA 60.303 57.895 11.82 0.00 37.13 2.52
178 179 0.889186 GCCACTCTTGCGGGAGAAAA 60.889 55.000 11.82 0.00 37.13 2.29
179 180 1.160137 CCACTCTTGCGGGAGAAAAG 58.840 55.000 11.82 0.00 37.13 2.27
180 181 1.543429 CCACTCTTGCGGGAGAAAAGT 60.543 52.381 11.82 0.00 37.13 2.66
181 182 2.222027 CACTCTTGCGGGAGAAAAGTT 58.778 47.619 11.82 0.00 37.13 2.66
182 183 2.618709 CACTCTTGCGGGAGAAAAGTTT 59.381 45.455 11.82 0.00 37.13 2.66
183 184 2.879026 ACTCTTGCGGGAGAAAAGTTTC 59.121 45.455 11.82 0.00 37.13 2.78
184 185 2.878406 CTCTTGCGGGAGAAAAGTTTCA 59.122 45.455 6.56 0.00 39.61 2.69
185 186 2.616842 TCTTGCGGGAGAAAAGTTTCAC 59.383 45.455 6.56 0.06 39.61 3.18
186 187 1.314730 TGCGGGAGAAAAGTTTCACC 58.685 50.000 10.72 10.72 44.15 4.02
187 188 1.133915 TGCGGGAGAAAAGTTTCACCT 60.134 47.619 16.57 0.00 44.27 4.00
188 189 1.535896 GCGGGAGAAAAGTTTCACCTC 59.464 52.381 16.57 8.56 44.27 3.85
189 190 2.152016 CGGGAGAAAAGTTTCACCTCC 58.848 52.381 16.57 17.00 44.27 4.30
190 191 2.515854 GGGAGAAAAGTTTCACCTCCC 58.484 52.381 23.57 23.57 44.27 4.30
191 192 2.108425 GGGAGAAAAGTTTCACCTCCCT 59.892 50.000 27.10 0.00 44.27 4.20
192 193 3.413327 GGAGAAAAGTTTCACCTCCCTC 58.587 50.000 15.45 0.00 42.40 4.30
193 194 3.181443 GGAGAAAAGTTTCACCTCCCTCA 60.181 47.826 15.45 0.00 42.40 3.86
194 195 4.507512 GGAGAAAAGTTTCACCTCCCTCAT 60.508 45.833 15.45 0.00 42.40 2.90
195 196 4.657013 AGAAAAGTTTCACCTCCCTCATC 58.343 43.478 6.56 0.00 39.61 2.92
196 197 4.104738 AGAAAAGTTTCACCTCCCTCATCA 59.895 41.667 6.56 0.00 39.61 3.07
197 198 4.453480 AAAGTTTCACCTCCCTCATCAA 57.547 40.909 0.00 0.00 0.00 2.57
198 199 3.425162 AGTTTCACCTCCCTCATCAAC 57.575 47.619 0.00 0.00 0.00 3.18
199 200 2.040412 AGTTTCACCTCCCTCATCAACC 59.960 50.000 0.00 0.00 0.00 3.77
200 201 2.040412 GTTTCACCTCCCTCATCAACCT 59.960 50.000 0.00 0.00 0.00 3.50
201 202 2.940514 TCACCTCCCTCATCAACCTA 57.059 50.000 0.00 0.00 0.00 3.08
202 203 2.467880 TCACCTCCCTCATCAACCTAC 58.532 52.381 0.00 0.00 0.00 3.18
203 204 2.044492 TCACCTCCCTCATCAACCTACT 59.956 50.000 0.00 0.00 0.00 2.57
204 205 2.169352 CACCTCCCTCATCAACCTACTG 59.831 54.545 0.00 0.00 0.00 2.74
205 206 1.139853 CCTCCCTCATCAACCTACTGC 59.860 57.143 0.00 0.00 0.00 4.40
206 207 0.824109 TCCCTCATCAACCTACTGCG 59.176 55.000 0.00 0.00 0.00 5.18
207 208 0.811616 CCCTCATCAACCTACTGCGC 60.812 60.000 0.00 0.00 0.00 6.09
208 209 0.176680 CCTCATCAACCTACTGCGCT 59.823 55.000 9.73 0.00 0.00 5.92
209 210 1.409064 CCTCATCAACCTACTGCGCTA 59.591 52.381 9.73 0.00 0.00 4.26
210 211 2.544694 CCTCATCAACCTACTGCGCTAG 60.545 54.545 9.73 7.16 0.00 3.42
211 212 1.202417 TCATCAACCTACTGCGCTAGC 60.202 52.381 9.73 4.06 45.41 3.42
212 213 0.105039 ATCAACCTACTGCGCTAGCC 59.895 55.000 9.73 2.49 44.33 3.93
213 214 1.521681 CAACCTACTGCGCTAGCCC 60.522 63.158 9.73 0.00 44.33 5.19
214 215 3.077519 AACCTACTGCGCTAGCCCG 62.078 63.158 9.73 0.00 44.33 6.13
215 216 3.528370 CCTACTGCGCTAGCCCGT 61.528 66.667 9.73 7.26 44.33 5.28
216 217 2.278857 CTACTGCGCTAGCCCGTG 60.279 66.667 9.73 0.00 44.33 4.94
217 218 3.774959 CTACTGCGCTAGCCCGTGG 62.775 68.421 9.73 3.21 44.33 4.94
230 231 2.468532 CCCGTGGCAATTTTATCGTC 57.531 50.000 0.00 0.00 0.00 4.20
231 232 1.740585 CCCGTGGCAATTTTATCGTCA 59.259 47.619 0.00 0.00 0.00 4.35
232 233 2.477189 CCCGTGGCAATTTTATCGTCAC 60.477 50.000 0.00 0.00 0.00 3.67
233 234 2.418628 CCGTGGCAATTTTATCGTCACT 59.581 45.455 0.00 0.00 0.00 3.41
234 235 3.119990 CCGTGGCAATTTTATCGTCACTT 60.120 43.478 0.00 0.00 0.00 3.16
235 236 4.472286 CGTGGCAATTTTATCGTCACTTT 58.528 39.130 0.00 0.00 0.00 2.66
236 237 4.915085 CGTGGCAATTTTATCGTCACTTTT 59.085 37.500 0.00 0.00 0.00 2.27
237 238 5.401079 CGTGGCAATTTTATCGTCACTTTTT 59.599 36.000 0.00 0.00 0.00 1.94
238 239 6.398517 CGTGGCAATTTTATCGTCACTTTTTC 60.399 38.462 0.00 0.00 0.00 2.29
239 240 5.923684 TGGCAATTTTATCGTCACTTTTTCC 59.076 36.000 0.00 0.00 0.00 3.13
240 241 6.156519 GGCAATTTTATCGTCACTTTTTCCT 58.843 36.000 0.00 0.00 0.00 3.36
241 242 6.089417 GGCAATTTTATCGTCACTTTTTCCTG 59.911 38.462 0.00 0.00 0.00 3.86
242 243 6.640907 GCAATTTTATCGTCACTTTTTCCTGT 59.359 34.615 0.00 0.00 0.00 4.00
243 244 7.148967 GCAATTTTATCGTCACTTTTTCCTGTC 60.149 37.037 0.00 0.00 0.00 3.51
244 245 5.585500 TTTATCGTCACTTTTTCCTGTCG 57.415 39.130 0.00 0.00 0.00 4.35
245 246 1.214367 TCGTCACTTTTTCCTGTCGC 58.786 50.000 0.00 0.00 0.00 5.19
246 247 0.234884 CGTCACTTTTTCCTGTCGCC 59.765 55.000 0.00 0.00 0.00 5.54
247 248 0.591659 GTCACTTTTTCCTGTCGCCC 59.408 55.000 0.00 0.00 0.00 6.13
248 249 0.181587 TCACTTTTTCCTGTCGCCCA 59.818 50.000 0.00 0.00 0.00 5.36
249 250 0.310854 CACTTTTTCCTGTCGCCCAC 59.689 55.000 0.00 0.00 0.00 4.61
250 251 0.822121 ACTTTTTCCTGTCGCCCACC 60.822 55.000 0.00 0.00 0.00 4.61
251 252 1.852067 CTTTTTCCTGTCGCCCACCG 61.852 60.000 0.00 0.00 38.61 4.94
255 256 3.849951 CCTGTCGCCCACCGCTAT 61.850 66.667 0.00 0.00 36.73 2.97
256 257 2.495409 CCTGTCGCCCACCGCTATA 61.495 63.158 0.00 0.00 36.73 1.31
257 258 1.440060 CTGTCGCCCACCGCTATAA 59.560 57.895 0.00 0.00 36.73 0.98
258 259 0.179094 CTGTCGCCCACCGCTATAAA 60.179 55.000 0.00 0.00 36.73 1.40
259 260 0.249676 TGTCGCCCACCGCTATAAAA 59.750 50.000 0.00 0.00 36.73 1.52
260 261 1.338864 TGTCGCCCACCGCTATAAAAA 60.339 47.619 0.00 0.00 36.73 1.94
261 262 1.329599 GTCGCCCACCGCTATAAAAAG 59.670 52.381 0.00 0.00 36.73 2.27
262 263 1.207570 TCGCCCACCGCTATAAAAAGA 59.792 47.619 0.00 0.00 36.73 2.52
263 264 1.329599 CGCCCACCGCTATAAAAAGAC 59.670 52.381 0.00 0.00 34.21 3.01
264 265 1.674441 GCCCACCGCTATAAAAAGACC 59.326 52.381 0.00 0.00 0.00 3.85
265 266 2.294979 CCCACCGCTATAAAAAGACCC 58.705 52.381 0.00 0.00 0.00 4.46
266 267 2.356330 CCCACCGCTATAAAAAGACCCA 60.356 50.000 0.00 0.00 0.00 4.51
267 268 2.681344 CCACCGCTATAAAAAGACCCAC 59.319 50.000 0.00 0.00 0.00 4.61
268 269 3.340034 CACCGCTATAAAAAGACCCACA 58.660 45.455 0.00 0.00 0.00 4.17
269 270 3.945285 CACCGCTATAAAAAGACCCACAT 59.055 43.478 0.00 0.00 0.00 3.21
270 271 4.035208 CACCGCTATAAAAAGACCCACATC 59.965 45.833 0.00 0.00 0.00 3.06
271 272 3.564225 CCGCTATAAAAAGACCCACATCC 59.436 47.826 0.00 0.00 0.00 3.51
272 273 4.451900 CGCTATAAAAAGACCCACATCCT 58.548 43.478 0.00 0.00 0.00 3.24
273 274 4.881850 CGCTATAAAAAGACCCACATCCTT 59.118 41.667 0.00 0.00 0.00 3.36
274 275 5.220854 CGCTATAAAAAGACCCACATCCTTG 60.221 44.000 0.00 0.00 0.00 3.61
275 276 5.450550 GCTATAAAAAGACCCACATCCTTGC 60.451 44.000 0.00 0.00 0.00 4.01
276 277 1.632589 AAAAGACCCACATCCTTGCC 58.367 50.000 0.00 0.00 0.00 4.52
277 278 0.609131 AAAGACCCACATCCTTGCCG 60.609 55.000 0.00 0.00 0.00 5.69
278 279 3.134127 GACCCACATCCTTGCCGC 61.134 66.667 0.00 0.00 0.00 6.53
279 280 4.740822 ACCCACATCCTTGCCGCC 62.741 66.667 0.00 0.00 0.00 6.13
280 281 4.738998 CCCACATCCTTGCCGCCA 62.739 66.667 0.00 0.00 0.00 5.69
281 282 2.676121 CCACATCCTTGCCGCCAA 60.676 61.111 0.00 0.00 0.00 4.52
282 283 2.053865 CCACATCCTTGCCGCCAAT 61.054 57.895 0.00 0.00 0.00 3.16
283 284 0.751277 CCACATCCTTGCCGCCAATA 60.751 55.000 0.00 0.00 0.00 1.90
284 285 0.664761 CACATCCTTGCCGCCAATAG 59.335 55.000 0.00 0.00 0.00 1.73
285 286 1.103398 ACATCCTTGCCGCCAATAGC 61.103 55.000 0.00 0.00 38.52 2.97
286 287 1.529244 ATCCTTGCCGCCAATAGCC 60.529 57.895 0.00 0.00 38.78 3.93
287 288 1.999634 ATCCTTGCCGCCAATAGCCT 62.000 55.000 0.00 0.00 38.78 4.58
288 289 1.754234 CCTTGCCGCCAATAGCCTT 60.754 57.895 0.00 0.00 38.78 4.35
289 290 1.728490 CCTTGCCGCCAATAGCCTTC 61.728 60.000 0.00 0.00 38.78 3.46
290 291 1.001517 TTGCCGCCAATAGCCTTCA 60.002 52.632 0.00 0.00 38.78 3.02
291 292 1.312371 TTGCCGCCAATAGCCTTCAC 61.312 55.000 0.00 0.00 38.78 3.18
292 293 1.452108 GCCGCCAATAGCCTTCACT 60.452 57.895 0.00 0.00 38.78 3.41
293 294 0.179056 GCCGCCAATAGCCTTCACTA 60.179 55.000 0.00 0.00 38.78 2.74
294 295 1.543429 GCCGCCAATAGCCTTCACTAT 60.543 52.381 0.00 0.00 38.78 2.12
295 296 2.417719 CCGCCAATAGCCTTCACTATC 58.582 52.381 0.00 0.00 38.78 2.08
296 297 2.224281 CCGCCAATAGCCTTCACTATCA 60.224 50.000 0.00 0.00 38.78 2.15
297 298 2.802816 CGCCAATAGCCTTCACTATCAC 59.197 50.000 0.00 0.00 38.78 3.06
298 299 2.802816 GCCAATAGCCTTCACTATCACG 59.197 50.000 0.00 0.00 31.54 4.35
299 300 3.393800 CCAATAGCCTTCACTATCACGG 58.606 50.000 0.00 0.00 31.54 4.94
300 301 3.181465 CCAATAGCCTTCACTATCACGGT 60.181 47.826 0.00 0.00 31.54 4.83
301 302 3.735237 ATAGCCTTCACTATCACGGTG 57.265 47.619 0.56 0.56 36.17 4.94
302 303 0.537188 AGCCTTCACTATCACGGTGG 59.463 55.000 8.50 0.00 35.61 4.61
303 304 0.462047 GCCTTCACTATCACGGTGGG 60.462 60.000 8.50 0.00 35.61 4.61
304 305 0.902531 CCTTCACTATCACGGTGGGT 59.097 55.000 8.50 2.68 35.61 4.51
313 314 2.841044 ACGGTGGGTGAACTCGGT 60.841 61.111 0.00 0.00 0.00 4.69
314 315 2.357034 CGGTGGGTGAACTCGGTG 60.357 66.667 0.00 0.00 0.00 4.94
315 316 2.863346 CGGTGGGTGAACTCGGTGA 61.863 63.158 0.00 0.00 0.00 4.02
316 317 1.677552 GGTGGGTGAACTCGGTGAT 59.322 57.895 0.00 0.00 0.00 3.06
317 318 0.673644 GGTGGGTGAACTCGGTGATG 60.674 60.000 0.00 0.00 0.00 3.07
318 319 0.034896 GTGGGTGAACTCGGTGATGT 59.965 55.000 0.00 0.00 0.00 3.06
319 320 0.762418 TGGGTGAACTCGGTGATGTT 59.238 50.000 0.00 0.00 0.00 2.71
320 321 1.270625 TGGGTGAACTCGGTGATGTTC 60.271 52.381 0.00 0.00 41.87 3.18
321 322 1.002087 GGGTGAACTCGGTGATGTTCT 59.998 52.381 0.00 0.00 41.99 3.01
322 323 2.338500 GGTGAACTCGGTGATGTTCTC 58.662 52.381 0.00 0.00 41.99 2.87
323 324 1.986378 GTGAACTCGGTGATGTTCTCG 59.014 52.381 0.00 0.00 41.99 4.04
324 325 1.067846 TGAACTCGGTGATGTTCTCGG 60.068 52.381 0.00 0.00 41.99 4.63
325 326 0.246635 AACTCGGTGATGTTCTCGGG 59.753 55.000 0.00 0.00 0.00 5.14
326 327 1.141881 CTCGGTGATGTTCTCGGGG 59.858 63.158 0.00 0.00 0.00 5.73
327 328 1.304630 TCGGTGATGTTCTCGGGGA 60.305 57.895 0.00 0.00 0.00 4.81
328 329 0.901114 TCGGTGATGTTCTCGGGGAA 60.901 55.000 0.00 0.00 0.00 3.97
329 330 0.460284 CGGTGATGTTCTCGGGGAAG 60.460 60.000 0.00 0.00 34.23 3.46
330 331 0.744771 GGTGATGTTCTCGGGGAAGC 60.745 60.000 0.00 0.00 34.23 3.86
331 332 0.036388 GTGATGTTCTCGGGGAAGCA 60.036 55.000 0.00 0.00 34.23 3.91
332 333 0.250234 TGATGTTCTCGGGGAAGCAG 59.750 55.000 0.00 0.00 34.23 4.24
333 334 0.250513 GATGTTCTCGGGGAAGCAGT 59.749 55.000 0.00 0.00 34.23 4.40
334 335 0.036010 ATGTTCTCGGGGAAGCAGTG 60.036 55.000 0.00 0.00 34.23 3.66
335 336 1.118965 TGTTCTCGGGGAAGCAGTGA 61.119 55.000 0.00 0.00 34.23 3.41
336 337 0.390472 GTTCTCGGGGAAGCAGTGAG 60.390 60.000 0.00 0.00 34.23 3.51
337 338 0.541998 TTCTCGGGGAAGCAGTGAGA 60.542 55.000 0.00 0.00 34.10 3.27
338 339 0.324738 TCTCGGGGAAGCAGTGAGAT 60.325 55.000 0.00 0.00 31.14 2.75
339 340 0.103937 CTCGGGGAAGCAGTGAGATC 59.896 60.000 0.00 0.00 0.00 2.75
340 341 1.144936 CGGGGAAGCAGTGAGATCC 59.855 63.158 0.00 0.00 0.00 3.36
341 342 1.333636 CGGGGAAGCAGTGAGATCCT 61.334 60.000 0.00 0.00 32.41 3.24
342 343 0.467804 GGGGAAGCAGTGAGATCCTC 59.532 60.000 0.00 0.00 32.41 3.71
343 344 0.103937 GGGAAGCAGTGAGATCCTCG 59.896 60.000 0.00 0.00 32.35 4.63
344 345 1.107114 GGAAGCAGTGAGATCCTCGA 58.893 55.000 0.00 0.00 32.35 4.04
345 346 1.066908 GGAAGCAGTGAGATCCTCGAG 59.933 57.143 5.13 5.13 32.35 4.04
346 347 2.020720 GAAGCAGTGAGATCCTCGAGA 58.979 52.381 15.71 0.00 32.35 4.04
347 348 2.136298 AGCAGTGAGATCCTCGAGAA 57.864 50.000 15.71 0.00 32.35 2.87
348 349 2.023673 AGCAGTGAGATCCTCGAGAAG 58.976 52.381 15.71 0.00 32.35 2.85
349 350 1.535860 GCAGTGAGATCCTCGAGAAGC 60.536 57.143 15.71 0.00 32.35 3.86
350 351 1.021202 AGTGAGATCCTCGAGAAGCG 58.979 55.000 15.71 0.00 42.69 4.68
351 352 0.593773 GTGAGATCCTCGAGAAGCGC 60.594 60.000 15.71 0.00 40.61 5.92
352 353 0.749818 TGAGATCCTCGAGAAGCGCT 60.750 55.000 15.71 2.64 40.61 5.92
353 354 0.317770 GAGATCCTCGAGAAGCGCTG 60.318 60.000 12.58 0.00 40.61 5.18
354 355 1.299773 GATCCTCGAGAAGCGCTGG 60.300 63.158 12.58 6.81 40.61 4.85
355 356 2.010582 GATCCTCGAGAAGCGCTGGT 62.011 60.000 12.58 0.00 40.61 4.00
356 357 0.752009 ATCCTCGAGAAGCGCTGGTA 60.752 55.000 12.58 0.00 40.61 3.25
357 358 0.963856 TCCTCGAGAAGCGCTGGTAA 60.964 55.000 12.58 0.00 40.61 2.85
358 359 0.108804 CCTCGAGAAGCGCTGGTAAA 60.109 55.000 12.58 0.00 40.61 2.01
359 360 1.671850 CCTCGAGAAGCGCTGGTAAAA 60.672 52.381 12.58 0.00 40.61 1.52
360 361 2.066262 CTCGAGAAGCGCTGGTAAAAA 58.934 47.619 12.58 0.00 40.61 1.94
361 362 1.796459 TCGAGAAGCGCTGGTAAAAAC 59.204 47.619 12.58 0.00 40.61 2.43
362 363 1.798813 CGAGAAGCGCTGGTAAAAACT 59.201 47.619 12.58 0.35 0.00 2.66
363 364 2.411547 CGAGAAGCGCTGGTAAAAACTG 60.412 50.000 12.58 0.00 0.00 3.16
364 365 2.548480 GAGAAGCGCTGGTAAAAACTGT 59.452 45.455 12.58 0.00 0.00 3.55
365 366 2.949644 AGAAGCGCTGGTAAAAACTGTT 59.050 40.909 12.58 0.00 0.00 3.16
366 367 3.380320 AGAAGCGCTGGTAAAAACTGTTT 59.620 39.130 12.58 0.00 0.00 2.83
367 368 3.078594 AGCGCTGGTAAAAACTGTTTG 57.921 42.857 10.39 0.00 0.00 2.93
368 369 1.521006 GCGCTGGTAAAAACTGTTTGC 59.479 47.619 6.53 3.93 0.00 3.68
369 370 2.803451 CGCTGGTAAAAACTGTTTGCA 58.197 42.857 6.53 0.00 0.00 4.08
370 371 3.380142 CGCTGGTAAAAACTGTTTGCAT 58.620 40.909 6.53 0.00 0.00 3.96
371 372 3.182173 CGCTGGTAAAAACTGTTTGCATG 59.818 43.478 6.53 0.00 0.00 4.06
372 373 3.494251 GCTGGTAAAAACTGTTTGCATGG 59.506 43.478 6.53 0.00 0.00 3.66
373 374 4.739137 GCTGGTAAAAACTGTTTGCATGGA 60.739 41.667 6.53 0.00 0.00 3.41
374 375 5.540911 CTGGTAAAAACTGTTTGCATGGAT 58.459 37.500 6.53 0.00 0.00 3.41
375 376 5.295950 TGGTAAAAACTGTTTGCATGGATG 58.704 37.500 6.53 0.00 0.00 3.51
376 377 5.163364 TGGTAAAAACTGTTTGCATGGATGT 60.163 36.000 6.53 0.00 0.00 3.06
377 378 5.757808 GGTAAAAACTGTTTGCATGGATGTT 59.242 36.000 6.53 0.00 0.00 2.71
378 379 5.989551 AAAAACTGTTTGCATGGATGTTC 57.010 34.783 6.53 0.00 0.00 3.18
379 380 4.669206 AAACTGTTTGCATGGATGTTCA 57.331 36.364 4.73 0.00 0.00 3.18
413 414 2.083774 CACCTTCGTATGTGCATTGGT 58.916 47.619 0.00 0.00 0.00 3.67
414 415 2.083774 ACCTTCGTATGTGCATTGGTG 58.916 47.619 0.00 0.00 0.00 4.17
415 416 2.083774 CCTTCGTATGTGCATTGGTGT 58.916 47.619 0.00 0.00 0.00 4.16
416 417 2.159531 CCTTCGTATGTGCATTGGTGTG 60.160 50.000 0.00 0.00 0.00 3.82
417 418 1.447945 TCGTATGTGCATTGGTGTGG 58.552 50.000 0.00 0.00 0.00 4.17
418 419 1.164411 CGTATGTGCATTGGTGTGGT 58.836 50.000 0.00 0.00 0.00 4.16
488 490 8.795786 TGCATGTACATTTCTTGAAGTTTTAC 57.204 30.769 5.37 0.00 0.00 2.01
501 503 6.144078 TGAAGTTTTACAGAGAAAAAGGCC 57.856 37.500 0.00 0.00 30.36 5.19
504 506 3.495434 TTTACAGAGAAAAAGGCCCGA 57.505 42.857 0.00 0.00 0.00 5.14
514 516 1.040339 AAAGGCCCGAACACAGCAAA 61.040 50.000 0.00 0.00 0.00 3.68
515 517 1.040339 AAGGCCCGAACACAGCAAAA 61.040 50.000 0.00 0.00 0.00 2.44
549 551 0.465460 TATGCACGGCAAAGATCCCC 60.465 55.000 2.68 0.00 43.62 4.81
592 594 0.248907 ACGGTGCATAACGATCTCCG 60.249 55.000 14.00 9.78 45.44 4.63
829 831 4.821589 GCAAGCGTCCCTCTCCCG 62.822 72.222 0.00 0.00 0.00 5.14
908 911 2.848310 CGTACGCCGTCAAACACC 59.152 61.111 0.52 0.00 0.00 4.16
943 946 1.289066 CGAGACGAGGAAACAGCCA 59.711 57.895 0.00 0.00 0.00 4.75
975 978 4.404654 CAAGCCGCGGGTTTCTGC 62.405 66.667 37.98 16.58 41.71 4.26
1300 1312 0.985549 GTCGTCGTACTCGTACTCGT 59.014 55.000 15.37 0.00 38.33 4.18
1301 1313 1.007933 GTCGTCGTACTCGTACTCGTC 60.008 57.143 15.37 10.04 38.33 4.20
1302 1314 0.045502 CGTCGTACTCGTACTCGTCG 60.046 60.000 5.76 0.00 38.33 5.12
1303 1315 0.313863 GTCGTACTCGTACTCGTCGC 60.314 60.000 5.76 0.00 38.33 5.19
1304 1316 1.012889 CGTACTCGTACTCGTCGCC 60.013 63.158 5.76 0.00 38.33 5.54
1305 1317 1.012889 GTACTCGTACTCGTCGCCG 60.013 63.158 0.12 0.00 38.33 6.46
1323 1335 4.736631 TCGTCGTCGTCGCTGCTG 62.737 66.667 7.01 0.00 38.33 4.41
1537 1549 0.454620 CGGATCGGATCGGATCGTTC 60.455 60.000 27.38 17.41 43.00 3.95
1538 1550 0.454620 GGATCGGATCGGATCGTTCG 60.455 60.000 27.38 9.79 43.00 3.95
1539 1551 1.066114 GATCGGATCGGATCGTTCGC 61.066 60.000 22.80 4.93 34.07 4.70
1540 1552 2.781750 ATCGGATCGGATCGTTCGCG 62.782 60.000 9.82 0.00 42.98 5.87
1596 1633 8.141909 TGGTCACGTATTATATTTCTTCAGAGG 58.858 37.037 0.00 0.00 0.00 3.69
1598 1635 8.358148 GTCACGTATTATATTTCTTCAGAGGGA 58.642 37.037 0.00 0.00 0.00 4.20
1600 1637 8.361139 CACGTATTATATTTCTTCAGAGGGAGT 58.639 37.037 0.00 0.00 0.00 3.85
1601 1638 9.584008 ACGTATTATATTTCTTCAGAGGGAGTA 57.416 33.333 0.00 0.00 0.00 2.59
1689 1736 2.973945 AGCCGTCAGAAAACTATCACC 58.026 47.619 0.00 0.00 0.00 4.02
1696 1746 6.036083 CCGTCAGAAAACTATCACCAGTATTG 59.964 42.308 0.00 0.00 0.00 1.90
1714 1764 2.787473 TGGGAGGATGTAAACTGCAG 57.213 50.000 13.48 13.48 0.00 4.41
1732 1782 7.834068 ACTGCAGTAAACTGTTGTGATATAG 57.166 36.000 20.16 0.00 45.45 1.31
1735 1785 8.697846 TGCAGTAAACTGTTGTGATATAGTAC 57.302 34.615 11.54 0.00 45.45 2.73
1830 1880 4.326826 TGACAAATTGCTCTCCAACCTAG 58.673 43.478 0.00 0.00 35.99 3.02
1835 1885 4.870021 ATTGCTCTCCAACCTAGGAAAT 57.130 40.909 17.98 0.00 37.20 2.17
1836 1886 3.634397 TGCTCTCCAACCTAGGAAATG 57.366 47.619 17.98 11.13 37.20 2.32
1844 1894 3.132289 CCAACCTAGGAAATGCTACTCGA 59.868 47.826 17.98 0.00 0.00 4.04
1851 1901 5.401531 AGGAAATGCTACTCGAACTGTAA 57.598 39.130 0.00 0.00 0.00 2.41
1860 1910 6.918022 TGCTACTCGAACTGTAATGTATCATG 59.082 38.462 0.00 0.00 0.00 3.07
1893 1943 7.572523 TTAATTTGGTTCTCTATGAGGCATG 57.427 36.000 0.00 0.00 0.00 4.06
1895 1945 1.141657 TGGTTCTCTATGAGGCATGCC 59.858 52.381 30.12 30.12 0.00 4.40
1896 1946 1.544314 GGTTCTCTATGAGGCATGCCC 60.544 57.143 33.14 23.56 36.58 5.36
1897 1947 0.767375 TTCTCTATGAGGCATGCCCC 59.233 55.000 33.14 23.40 36.58 5.80
1898 1948 0.400381 TCTCTATGAGGCATGCCCCA 60.400 55.000 33.14 28.87 36.58 4.96
1899 1949 0.697079 CTCTATGAGGCATGCCCCAT 59.303 55.000 32.93 32.93 36.58 4.00
1900 1950 0.694771 TCTATGAGGCATGCCCCATC 59.305 55.000 34.17 24.59 36.58 3.51
1901 1951 0.697079 CTATGAGGCATGCCCCATCT 59.303 55.000 34.17 17.62 36.58 2.90
1902 1952 0.402887 TATGAGGCATGCCCCATCTG 59.597 55.000 34.17 0.00 36.58 2.90
1903 1953 2.910994 GAGGCATGCCCCATCTGC 60.911 66.667 33.14 10.11 36.58 4.26
1904 1954 3.426836 AGGCATGCCCCATCTGCT 61.427 61.111 33.14 9.27 36.18 4.24
1905 1955 2.443390 GGCATGCCCCATCTGCTT 60.443 61.111 27.24 0.00 36.18 3.91
1906 1956 1.152694 GGCATGCCCCATCTGCTTA 60.153 57.895 27.24 0.00 36.18 3.09
1907 1957 0.541296 GGCATGCCCCATCTGCTTAT 60.541 55.000 27.24 0.00 36.18 1.73
1908 1958 0.601558 GCATGCCCCATCTGCTTATG 59.398 55.000 6.36 0.00 33.15 1.90
1909 1959 1.991121 CATGCCCCATCTGCTTATGT 58.009 50.000 0.00 0.00 0.00 2.29
1910 1960 1.884579 CATGCCCCATCTGCTTATGTC 59.115 52.381 0.00 0.00 0.00 3.06
1911 1961 0.183492 TGCCCCATCTGCTTATGTCC 59.817 55.000 0.00 0.00 0.00 4.02
1912 1962 0.183492 GCCCCATCTGCTTATGTCCA 59.817 55.000 0.00 0.00 0.00 4.02
1913 1963 1.816961 GCCCCATCTGCTTATGTCCAG 60.817 57.143 0.00 0.00 0.00 3.86
1914 1964 1.770658 CCCCATCTGCTTATGTCCAGA 59.229 52.381 0.00 0.00 41.81 3.86
1915 1965 2.224475 CCCCATCTGCTTATGTCCAGAG 60.224 54.545 0.00 0.00 41.00 3.35
1916 1966 2.437281 CCCATCTGCTTATGTCCAGAGT 59.563 50.000 0.00 0.00 41.00 3.24
1917 1967 3.464907 CCATCTGCTTATGTCCAGAGTG 58.535 50.000 0.00 0.00 41.00 3.51
1918 1968 3.464907 CATCTGCTTATGTCCAGAGTGG 58.535 50.000 0.00 0.00 41.00 4.00
1919 1969 2.820178 TCTGCTTATGTCCAGAGTGGA 58.180 47.619 0.00 0.00 45.98 4.02
1944 1994 7.713734 AATTCAGAATTTCAGACATGGATGT 57.286 32.000 2.20 0.00 45.16 3.06
1945 1995 8.248945 AAATTCAGAATTTCAGACATGGATGTC 58.751 33.333 14.43 11.19 45.35 3.06
1962 2012 3.686622 TCGCAAGAGAAAGTGCAGT 57.313 47.368 0.00 0.00 45.01 4.40
1963 2013 1.953559 TCGCAAGAGAAAGTGCAGTT 58.046 45.000 0.00 0.00 45.01 3.16
1964 2014 1.867233 TCGCAAGAGAAAGTGCAGTTC 59.133 47.619 7.36 4.55 45.01 3.01
1965 2015 1.599071 CGCAAGAGAAAGTGCAGTTCA 59.401 47.619 7.36 0.00 40.94 3.18
1966 2016 2.349249 CGCAAGAGAAAGTGCAGTTCAG 60.349 50.000 7.36 0.00 40.94 3.02
1967 2017 2.031333 GCAAGAGAAAGTGCAGTTCAGG 60.031 50.000 7.36 0.00 40.58 3.86
1968 2018 1.889545 AGAGAAAGTGCAGTTCAGGC 58.110 50.000 7.36 0.00 0.00 4.85
1969 2019 0.877743 GAGAAAGTGCAGTTCAGGCC 59.122 55.000 7.36 0.00 0.00 5.19
1970 2020 0.183492 AGAAAGTGCAGTTCAGGCCA 59.817 50.000 7.36 0.00 0.00 5.36
1971 2021 1.032014 GAAAGTGCAGTTCAGGCCAA 58.968 50.000 7.36 0.00 0.00 4.52
1972 2022 0.746659 AAAGTGCAGTTCAGGCCAAC 59.253 50.000 7.36 0.60 0.00 3.77
1973 2023 0.395586 AAGTGCAGTTCAGGCCAACA 60.396 50.000 5.01 0.00 0.00 3.33
1974 2024 0.395586 AGTGCAGTTCAGGCCAACAA 60.396 50.000 5.01 0.00 0.00 2.83
1975 2025 0.459489 GTGCAGTTCAGGCCAACAAA 59.541 50.000 5.01 0.00 0.00 2.83
1976 2026 1.134848 GTGCAGTTCAGGCCAACAAAA 60.135 47.619 5.01 0.00 0.00 2.44
1977 2027 1.552337 TGCAGTTCAGGCCAACAAAAA 59.448 42.857 5.01 0.00 0.00 1.94
1978 2028 1.933181 GCAGTTCAGGCCAACAAAAAC 59.067 47.619 5.01 0.00 0.00 2.43
1979 2029 2.418609 GCAGTTCAGGCCAACAAAAACT 60.419 45.455 5.01 2.00 0.00 2.66
1980 2030 3.189285 CAGTTCAGGCCAACAAAAACTG 58.811 45.455 5.01 11.02 38.09 3.16
1981 2031 2.168313 AGTTCAGGCCAACAAAAACTGG 59.832 45.455 5.01 0.00 35.67 4.00
1982 2032 2.151502 TCAGGCCAACAAAAACTGGA 57.848 45.000 5.01 0.00 34.35 3.86
1983 2033 2.031120 TCAGGCCAACAAAAACTGGAG 58.969 47.619 5.01 0.00 34.35 3.86
1984 2034 0.752658 AGGCCAACAAAAACTGGAGC 59.247 50.000 5.01 0.00 34.35 4.70
1985 2035 0.597377 GGCCAACAAAAACTGGAGCG 60.597 55.000 0.00 0.00 34.35 5.03
1986 2036 0.383949 GCCAACAAAAACTGGAGCGA 59.616 50.000 0.00 0.00 34.35 4.93
1987 2037 1.202359 GCCAACAAAAACTGGAGCGAA 60.202 47.619 0.00 0.00 34.35 4.70
1988 2038 2.737039 GCCAACAAAAACTGGAGCGAAA 60.737 45.455 0.00 0.00 34.35 3.46
1989 2039 3.716601 CCAACAAAAACTGGAGCGAAAT 58.283 40.909 0.00 0.00 34.35 2.17
1990 2040 3.735746 CCAACAAAAACTGGAGCGAAATC 59.264 43.478 0.00 0.00 34.35 2.17
1991 2041 4.358851 CAACAAAAACTGGAGCGAAATCA 58.641 39.130 0.00 0.00 0.00 2.57
2013 2063 5.047731 TCACTCCTTCTCTGAACATACACTG 60.048 44.000 0.00 0.00 0.00 3.66
2033 2083 5.963586 CACTGAGTCTTTTAAAACCACGAAC 59.036 40.000 0.00 0.00 0.00 3.95
2134 2195 4.379918 GCATTTTCTCTCCCGAAAAGGAAG 60.380 45.833 12.89 2.30 43.48 3.46
2210 2278 6.403200 GCTGCCAGTTAACTAATCGAAATTGA 60.403 38.462 8.04 0.00 0.00 2.57
2211 2279 7.624360 TGCCAGTTAACTAATCGAAATTGAT 57.376 32.000 8.04 0.00 0.00 2.57
2222 2328 5.725110 ATCGAAATTGATCCGTGAAGAAG 57.275 39.130 0.00 0.00 0.00 2.85
2237 2343 1.166531 AGAAGGTGGAAACGCTGCAC 61.167 55.000 0.00 1.63 45.25 4.57
2251 2357 1.402511 CTGCACGAAAGAAAGCAAGC 58.597 50.000 0.00 0.00 36.76 4.01
2274 2392 6.645415 AGCAAGAAAGAAAGAGAAATGCAATG 59.355 34.615 0.00 0.00 33.89 2.82
2286 2411 0.625316 ATGCAATGCAGGACAGGGTA 59.375 50.000 14.98 0.00 43.65 3.69
2342 2467 0.387367 CAGATAGAACCCGGCGATCG 60.387 60.000 11.69 11.69 38.88 3.69
2429 2554 0.107508 GGGGGCGAGTACCTAAAACC 60.108 60.000 0.00 0.00 0.00 3.27
2441 2566 2.131972 CCTAAAACCAAAAGCAACCGC 58.868 47.619 0.00 0.00 38.99 5.68
2493 2618 4.937620 TCTGTATGTGACATTTCTTGGCTC 59.062 41.667 2.29 0.00 37.45 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.336131 TGCTATGGCTCCTCTGCTAG 58.664 55.000 1.68 0.00 39.59 3.42
2 3 0.179936 GTTGCTATGGCTCCTCTGCT 59.820 55.000 1.68 0.00 39.59 4.24
4 5 0.531532 CGGTTGCTATGGCTCCTCTG 60.532 60.000 1.68 0.00 39.59 3.35
5 6 0.978146 ACGGTTGCTATGGCTCCTCT 60.978 55.000 1.68 0.00 39.59 3.69
6 7 0.530870 GACGGTTGCTATGGCTCCTC 60.531 60.000 1.68 2.12 39.59 3.71
7 8 1.264749 TGACGGTTGCTATGGCTCCT 61.265 55.000 1.68 0.00 39.59 3.69
8 9 1.090052 GTGACGGTTGCTATGGCTCC 61.090 60.000 1.68 4.29 39.59 4.70
9 10 0.108138 AGTGACGGTTGCTATGGCTC 60.108 55.000 1.68 0.00 39.59 4.70
10 11 0.108138 GAGTGACGGTTGCTATGGCT 60.108 55.000 1.68 0.00 39.59 4.75
11 12 0.108138 AGAGTGACGGTTGCTATGGC 60.108 55.000 0.00 0.00 39.26 4.40
12 13 1.204704 TCAGAGTGACGGTTGCTATGG 59.795 52.381 7.37 0.00 0.00 2.74
13 14 2.263077 GTCAGAGTGACGGTTGCTATG 58.737 52.381 0.00 2.50 37.67 2.23
14 15 2.656560 GTCAGAGTGACGGTTGCTAT 57.343 50.000 0.00 0.00 37.67 2.97
23 24 1.457303 GCACACAATCGTCAGAGTGAC 59.543 52.381 2.93 0.00 44.46 3.67
24 25 1.605457 GGCACACAATCGTCAGAGTGA 60.605 52.381 2.93 0.00 44.46 3.41
25 26 0.792640 GGCACACAATCGTCAGAGTG 59.207 55.000 0.00 0.00 46.77 3.51
26 27 0.392706 TGGCACACAATCGTCAGAGT 59.607 50.000 0.00 0.00 0.00 3.24
27 28 1.511850 TTGGCACACAATCGTCAGAG 58.488 50.000 0.00 0.00 39.29 3.35
28 29 1.960417 TTTGGCACACAATCGTCAGA 58.040 45.000 0.00 0.00 39.29 3.27
29 30 2.772568 TTTTGGCACACAATCGTCAG 57.227 45.000 0.00 0.00 39.29 3.51
30 31 2.620585 TCATTTTGGCACACAATCGTCA 59.379 40.909 0.00 0.00 36.49 4.35
31 32 2.979813 GTCATTTTGGCACACAATCGTC 59.020 45.455 0.00 0.00 36.49 4.20
32 33 2.360483 TGTCATTTTGGCACACAATCGT 59.640 40.909 0.00 0.00 36.49 3.73
33 34 3.010624 TGTCATTTTGGCACACAATCG 57.989 42.857 0.00 0.00 36.49 3.34
42 43 7.678226 CAATTATGCTAAAGTGTCATTTTGGC 58.322 34.615 18.41 18.41 40.91 4.52
45 46 8.042515 ATGGCAATTATGCTAAAGTGTCATTTT 58.957 29.630 11.54 0.00 44.63 1.82
46 47 7.558604 ATGGCAATTATGCTAAAGTGTCATTT 58.441 30.769 11.54 0.00 44.63 2.32
47 48 7.116075 ATGGCAATTATGCTAAAGTGTCATT 57.884 32.000 11.54 0.55 44.63 2.57
60 61 7.538575 GCCCTACATAAGTTATGGCAATTATG 58.461 38.462 23.49 16.77 40.47 1.90
61 62 6.374333 CGCCCTACATAAGTTATGGCAATTAT 59.626 38.462 23.49 6.51 40.47 1.28
62 63 5.703592 CGCCCTACATAAGTTATGGCAATTA 59.296 40.000 23.49 8.41 40.47 1.40
63 64 4.518970 CGCCCTACATAAGTTATGGCAATT 59.481 41.667 23.49 7.76 40.47 2.32
64 65 4.072131 CGCCCTACATAAGTTATGGCAAT 58.928 43.478 23.49 8.08 40.47 3.56
65 66 3.472652 CGCCCTACATAAGTTATGGCAA 58.527 45.455 23.49 10.18 40.47 4.52
66 67 2.808933 GCGCCCTACATAAGTTATGGCA 60.809 50.000 23.49 12.00 40.47 4.92
67 68 1.804748 GCGCCCTACATAAGTTATGGC 59.195 52.381 23.49 16.81 40.47 4.40
68 69 3.402628 AGCGCCCTACATAAGTTATGG 57.597 47.619 23.49 9.61 40.47 2.74
69 70 4.377021 TGAAGCGCCCTACATAAGTTATG 58.623 43.478 19.28 19.28 41.88 1.90
70 71 4.682778 TGAAGCGCCCTACATAAGTTAT 57.317 40.909 2.29 0.00 0.00 1.89
71 72 4.682778 ATGAAGCGCCCTACATAAGTTA 57.317 40.909 2.29 0.00 0.00 2.24
72 73 3.560636 ATGAAGCGCCCTACATAAGTT 57.439 42.857 2.29 0.00 0.00 2.66
73 74 4.618460 CGATATGAAGCGCCCTACATAAGT 60.618 45.833 2.29 0.00 0.00 2.24
74 75 3.859961 CGATATGAAGCGCCCTACATAAG 59.140 47.826 2.29 4.84 0.00 1.73
75 76 3.508402 TCGATATGAAGCGCCCTACATAA 59.492 43.478 2.29 0.00 33.63 1.90
76 77 3.086282 TCGATATGAAGCGCCCTACATA 58.914 45.455 2.29 9.66 33.63 2.29
77 78 1.893137 TCGATATGAAGCGCCCTACAT 59.107 47.619 2.29 7.60 33.63 2.29
78 79 1.269723 CTCGATATGAAGCGCCCTACA 59.730 52.381 2.29 0.00 33.63 2.74
79 80 1.983972 CTCGATATGAAGCGCCCTAC 58.016 55.000 2.29 0.00 33.63 3.18
80 81 0.243907 GCTCGATATGAAGCGCCCTA 59.756 55.000 2.29 0.00 33.63 3.53
81 82 1.005630 GCTCGATATGAAGCGCCCT 60.006 57.895 2.29 0.00 33.63 5.19
82 83 2.029844 GGCTCGATATGAAGCGCCC 61.030 63.158 2.29 0.00 33.63 6.13
83 84 2.029844 GGGCTCGATATGAAGCGCC 61.030 63.158 2.29 0.00 35.29 6.53
84 85 2.375766 CGGGCTCGATATGAAGCGC 61.376 63.158 0.00 0.00 39.00 5.92
85 86 1.007271 ACGGGCTCGATATGAAGCG 60.007 57.895 15.95 0.00 40.11 4.68
86 87 0.032130 TCACGGGCTCGATATGAAGC 59.968 55.000 15.95 0.00 40.11 3.86
87 88 1.932604 GCTCACGGGCTCGATATGAAG 60.933 57.143 15.95 1.63 40.11 3.02
88 89 0.032130 GCTCACGGGCTCGATATGAA 59.968 55.000 15.95 0.00 40.11 2.57
89 90 1.660355 GCTCACGGGCTCGATATGA 59.340 57.895 15.95 5.03 40.11 2.15
90 91 1.373497 GGCTCACGGGCTCGATATG 60.373 63.158 15.95 0.00 40.11 1.78
91 92 3.052081 GGCTCACGGGCTCGATAT 58.948 61.111 15.95 0.00 40.11 1.63
98 99 0.179018 AAATATGGAGGCTCACGGGC 60.179 55.000 17.69 0.00 41.20 6.13
99 100 1.597742 CAAATATGGAGGCTCACGGG 58.402 55.000 17.69 0.00 0.00 5.28
111 112 5.237048 CAAAACCCACAACCTCCAAATATG 58.763 41.667 0.00 0.00 0.00 1.78
112 113 4.285775 CCAAAACCCACAACCTCCAAATAT 59.714 41.667 0.00 0.00 0.00 1.28
113 114 3.643792 CCAAAACCCACAACCTCCAAATA 59.356 43.478 0.00 0.00 0.00 1.40
114 115 2.437651 CCAAAACCCACAACCTCCAAAT 59.562 45.455 0.00 0.00 0.00 2.32
115 116 1.834263 CCAAAACCCACAACCTCCAAA 59.166 47.619 0.00 0.00 0.00 3.28
116 117 1.490574 CCAAAACCCACAACCTCCAA 58.509 50.000 0.00 0.00 0.00 3.53
117 118 1.045911 GCCAAAACCCACAACCTCCA 61.046 55.000 0.00 0.00 0.00 3.86
118 119 1.745890 GCCAAAACCCACAACCTCC 59.254 57.895 0.00 0.00 0.00 4.30
119 120 0.759060 AGGCCAAAACCCACAACCTC 60.759 55.000 5.01 0.00 0.00 3.85
120 121 0.759060 GAGGCCAAAACCCACAACCT 60.759 55.000 5.01 0.00 0.00 3.50
121 122 1.745890 GAGGCCAAAACCCACAACC 59.254 57.895 5.01 0.00 0.00 3.77
122 123 1.104577 TCGAGGCCAAAACCCACAAC 61.105 55.000 5.01 0.00 0.00 3.32
123 124 0.821711 CTCGAGGCCAAAACCCACAA 60.822 55.000 5.01 0.00 0.00 3.33
124 125 1.228124 CTCGAGGCCAAAACCCACA 60.228 57.895 5.01 0.00 0.00 4.17
125 126 2.626780 GCTCGAGGCCAAAACCCAC 61.627 63.158 15.58 0.00 34.27 4.61
126 127 2.282180 GCTCGAGGCCAAAACCCA 60.282 61.111 15.58 0.00 34.27 4.51
127 128 2.282180 TGCTCGAGGCCAAAACCC 60.282 61.111 15.58 0.00 40.92 4.11
128 129 1.896660 TGTGCTCGAGGCCAAAACC 60.897 57.895 15.58 0.00 40.92 3.27
129 130 1.282875 GTGTGCTCGAGGCCAAAAC 59.717 57.895 15.58 3.34 40.92 2.43
130 131 1.896660 GGTGTGCTCGAGGCCAAAA 60.897 57.895 15.58 0.00 40.92 2.44
131 132 2.281484 GGTGTGCTCGAGGCCAAA 60.281 61.111 15.58 0.00 40.92 3.28
132 133 4.329545 GGGTGTGCTCGAGGCCAA 62.330 66.667 15.58 0.00 40.92 4.52
135 136 4.101448 ATGGGGTGTGCTCGAGGC 62.101 66.667 15.58 7.24 42.22 4.70
136 137 2.187946 GATGGGGTGTGCTCGAGG 59.812 66.667 15.58 0.00 0.00 4.63
137 138 2.187946 GGATGGGGTGTGCTCGAG 59.812 66.667 8.45 8.45 0.00 4.04
138 139 2.606213 TGGATGGGGTGTGCTCGA 60.606 61.111 0.00 0.00 0.00 4.04
139 140 2.436646 GTGGATGGGGTGTGCTCG 60.437 66.667 0.00 0.00 0.00 5.03
140 141 2.044946 GGTGGATGGGGTGTGCTC 60.045 66.667 0.00 0.00 0.00 4.26
141 142 2.858476 TGGTGGATGGGGTGTGCT 60.858 61.111 0.00 0.00 0.00 4.40
142 143 2.361610 CTGGTGGATGGGGTGTGC 60.362 66.667 0.00 0.00 0.00 4.57
143 144 2.361610 GCTGGTGGATGGGGTGTG 60.362 66.667 0.00 0.00 0.00 3.82
144 145 3.661648 GGCTGGTGGATGGGGTGT 61.662 66.667 0.00 0.00 0.00 4.16
145 146 3.660571 TGGCTGGTGGATGGGGTG 61.661 66.667 0.00 0.00 0.00 4.61
146 147 3.661648 GTGGCTGGTGGATGGGGT 61.662 66.667 0.00 0.00 0.00 4.95
147 148 3.341629 AGTGGCTGGTGGATGGGG 61.342 66.667 0.00 0.00 0.00 4.96
148 149 1.856539 AAGAGTGGCTGGTGGATGGG 61.857 60.000 0.00 0.00 0.00 4.00
149 150 0.679002 CAAGAGTGGCTGGTGGATGG 60.679 60.000 0.00 0.00 0.00 3.51
150 151 1.310933 GCAAGAGTGGCTGGTGGATG 61.311 60.000 0.00 0.00 0.00 3.51
151 152 1.001641 GCAAGAGTGGCTGGTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
152 153 2.431683 GCAAGAGTGGCTGGTGGA 59.568 61.111 0.00 0.00 0.00 4.02
153 154 3.052082 CGCAAGAGTGGCTGGTGG 61.052 66.667 0.00 0.00 43.02 4.61
154 155 3.052082 CCGCAAGAGTGGCTGGTG 61.052 66.667 0.00 0.00 38.83 4.17
155 156 4.335647 CCCGCAAGAGTGGCTGGT 62.336 66.667 0.00 0.00 44.28 4.00
156 157 3.965539 CTCCCGCAAGAGTGGCTGG 62.966 68.421 0.00 0.00 44.28 4.85
157 158 2.435586 CTCCCGCAAGAGTGGCTG 60.436 66.667 0.00 0.00 44.28 4.85
158 159 1.768684 TTTCTCCCGCAAGAGTGGCT 61.769 55.000 0.31 0.00 44.28 4.75
159 160 0.889186 TTTTCTCCCGCAAGAGTGGC 60.889 55.000 0.31 0.00 44.28 5.01
160 161 1.160137 CTTTTCTCCCGCAAGAGTGG 58.840 55.000 0.31 0.00 45.25 4.00
161 162 1.884235 ACTTTTCTCCCGCAAGAGTG 58.116 50.000 0.31 0.00 43.02 3.51
162 163 2.640316 AACTTTTCTCCCGCAAGAGT 57.360 45.000 0.31 0.00 43.02 3.24
163 164 2.878406 TGAAACTTTTCTCCCGCAAGAG 59.122 45.455 3.48 0.00 37.57 2.85
164 165 2.616842 GTGAAACTTTTCTCCCGCAAGA 59.383 45.455 3.48 0.00 37.57 3.02
165 166 2.287608 GGTGAAACTTTTCTCCCGCAAG 60.288 50.000 10.49 0.00 42.23 4.01
166 167 1.679153 GGTGAAACTTTTCTCCCGCAA 59.321 47.619 10.49 0.00 42.23 4.85
167 168 1.133915 AGGTGAAACTTTTCTCCCGCA 60.134 47.619 15.88 0.00 46.67 5.69
168 169 1.535896 GAGGTGAAACTTTTCTCCCGC 59.464 52.381 15.88 8.38 46.67 6.13
169 170 2.152016 GGAGGTGAAACTTTTCTCCCG 58.848 52.381 15.88 0.00 46.67 5.14
170 171 2.108425 AGGGAGGTGAAACTTTTCTCCC 59.892 50.000 20.19 20.19 46.67 4.30
171 172 3.181443 TGAGGGAGGTGAAACTTTTCTCC 60.181 47.826 12.86 12.86 46.14 3.71
172 173 4.086706 TGAGGGAGGTGAAACTTTTCTC 57.913 45.455 3.48 0.00 38.02 2.87
173 174 4.104738 TGATGAGGGAGGTGAAACTTTTCT 59.895 41.667 3.48 0.00 38.02 2.52
174 175 4.398319 TGATGAGGGAGGTGAAACTTTTC 58.602 43.478 0.00 0.00 36.74 2.29
175 176 4.453480 TGATGAGGGAGGTGAAACTTTT 57.547 40.909 0.00 0.00 36.74 2.27
176 177 4.145052 GTTGATGAGGGAGGTGAAACTTT 58.855 43.478 0.00 0.00 36.74 2.66
177 178 3.498661 GGTTGATGAGGGAGGTGAAACTT 60.499 47.826 0.00 0.00 36.74 2.66
178 179 2.040412 GGTTGATGAGGGAGGTGAAACT 59.960 50.000 0.00 0.00 36.74 2.66
179 180 2.040412 AGGTTGATGAGGGAGGTGAAAC 59.960 50.000 0.00 0.00 0.00 2.78
180 181 2.348472 AGGTTGATGAGGGAGGTGAAA 58.652 47.619 0.00 0.00 0.00 2.69
181 182 2.044793 AGGTTGATGAGGGAGGTGAA 57.955 50.000 0.00 0.00 0.00 3.18
182 183 2.044492 AGTAGGTTGATGAGGGAGGTGA 59.956 50.000 0.00 0.00 0.00 4.02
183 184 2.169352 CAGTAGGTTGATGAGGGAGGTG 59.831 54.545 0.00 0.00 0.00 4.00
184 185 2.472029 CAGTAGGTTGATGAGGGAGGT 58.528 52.381 0.00 0.00 0.00 3.85
185 186 1.139853 GCAGTAGGTTGATGAGGGAGG 59.860 57.143 0.00 0.00 0.00 4.30
186 187 1.202463 CGCAGTAGGTTGATGAGGGAG 60.202 57.143 0.00 0.00 0.00 4.30
187 188 0.824109 CGCAGTAGGTTGATGAGGGA 59.176 55.000 0.00 0.00 0.00 4.20
188 189 0.811616 GCGCAGTAGGTTGATGAGGG 60.812 60.000 0.30 0.00 0.00 4.30
189 190 0.176680 AGCGCAGTAGGTTGATGAGG 59.823 55.000 11.47 0.00 0.00 3.86
190 191 2.736978 CTAGCGCAGTAGGTTGATGAG 58.263 52.381 11.47 0.00 0.00 2.90
191 192 1.202417 GCTAGCGCAGTAGGTTGATGA 60.202 52.381 11.47 0.00 35.78 2.92
192 193 1.212616 GCTAGCGCAGTAGGTTGATG 58.787 55.000 11.47 0.00 35.78 3.07
193 194 0.105039 GGCTAGCGCAGTAGGTTGAT 59.895 55.000 11.47 0.00 38.10 2.57
194 195 1.515954 GGCTAGCGCAGTAGGTTGA 59.484 57.895 11.47 0.00 38.10 3.18
195 196 1.521681 GGGCTAGCGCAGTAGGTTG 60.522 63.158 25.48 0.00 38.10 3.77
196 197 2.901042 GGGCTAGCGCAGTAGGTT 59.099 61.111 25.48 0.00 38.10 3.50
197 198 3.528370 CGGGCTAGCGCAGTAGGT 61.528 66.667 28.70 0.00 38.10 3.08
198 199 3.528370 ACGGGCTAGCGCAGTAGG 61.528 66.667 28.70 15.73 38.10 3.18
199 200 2.278857 CACGGGCTAGCGCAGTAG 60.279 66.667 28.70 16.07 38.10 2.57
200 201 3.833645 CCACGGGCTAGCGCAGTA 61.834 66.667 28.70 0.00 38.10 2.74
211 212 1.740585 TGACGATAAAATTGCCACGGG 59.259 47.619 0.00 0.00 0.00 5.28
212 213 2.418628 AGTGACGATAAAATTGCCACGG 59.581 45.455 0.00 0.00 0.00 4.94
213 214 3.740044 AGTGACGATAAAATTGCCACG 57.260 42.857 0.00 0.00 0.00 4.94
214 215 6.128929 GGAAAAAGTGACGATAAAATTGCCAC 60.129 38.462 0.00 0.00 0.00 5.01
215 216 5.923684 GGAAAAAGTGACGATAAAATTGCCA 59.076 36.000 0.00 0.00 0.00 4.92
216 217 6.089417 CAGGAAAAAGTGACGATAAAATTGCC 59.911 38.462 0.00 0.00 0.00 4.52
217 218 6.640907 ACAGGAAAAAGTGACGATAAAATTGC 59.359 34.615 0.00 0.00 0.00 3.56
218 219 7.059488 CGACAGGAAAAAGTGACGATAAAATTG 59.941 37.037 0.00 0.00 34.43 2.32
219 220 7.075741 CGACAGGAAAAAGTGACGATAAAATT 58.924 34.615 0.00 0.00 34.43 1.82
220 221 6.599437 CGACAGGAAAAAGTGACGATAAAAT 58.401 36.000 0.00 0.00 34.43 1.82
221 222 5.559417 GCGACAGGAAAAAGTGACGATAAAA 60.559 40.000 0.00 0.00 34.43 1.52
222 223 4.084223 GCGACAGGAAAAAGTGACGATAAA 60.084 41.667 0.00 0.00 34.43 1.40
223 224 3.430895 GCGACAGGAAAAAGTGACGATAA 59.569 43.478 0.00 0.00 34.43 1.75
224 225 2.991190 GCGACAGGAAAAAGTGACGATA 59.009 45.455 0.00 0.00 34.43 2.92
225 226 1.798813 GCGACAGGAAAAAGTGACGAT 59.201 47.619 0.00 0.00 34.43 3.73
226 227 1.214367 GCGACAGGAAAAAGTGACGA 58.786 50.000 0.00 0.00 34.43 4.20
227 228 0.234884 GGCGACAGGAAAAAGTGACG 59.765 55.000 0.00 0.00 35.41 4.35
228 229 0.591659 GGGCGACAGGAAAAAGTGAC 59.408 55.000 0.00 0.00 0.00 3.67
229 230 0.181587 TGGGCGACAGGAAAAAGTGA 59.818 50.000 0.00 0.00 0.00 3.41
230 231 0.310854 GTGGGCGACAGGAAAAAGTG 59.689 55.000 0.00 0.00 0.00 3.16
231 232 0.822121 GGTGGGCGACAGGAAAAAGT 60.822 55.000 1.14 0.00 0.00 2.66
232 233 1.852067 CGGTGGGCGACAGGAAAAAG 61.852 60.000 1.14 0.00 0.00 2.27
233 234 1.894756 CGGTGGGCGACAGGAAAAA 60.895 57.895 1.14 0.00 0.00 1.94
234 235 2.281208 CGGTGGGCGACAGGAAAA 60.281 61.111 1.14 0.00 0.00 2.29
244 245 1.674441 GGTCTTTTTATAGCGGTGGGC 59.326 52.381 0.00 0.00 44.05 5.36
245 246 2.294979 GGGTCTTTTTATAGCGGTGGG 58.705 52.381 0.00 0.00 0.00 4.61
246 247 2.681344 GTGGGTCTTTTTATAGCGGTGG 59.319 50.000 0.00 0.00 0.00 4.61
247 248 3.340034 TGTGGGTCTTTTTATAGCGGTG 58.660 45.455 0.00 0.00 0.00 4.94
248 249 3.706600 TGTGGGTCTTTTTATAGCGGT 57.293 42.857 0.00 0.00 0.00 5.68
249 250 3.564225 GGATGTGGGTCTTTTTATAGCGG 59.436 47.826 0.00 0.00 0.00 5.52
250 251 4.451900 AGGATGTGGGTCTTTTTATAGCG 58.548 43.478 0.00 0.00 0.00 4.26
251 252 5.450550 GCAAGGATGTGGGTCTTTTTATAGC 60.451 44.000 0.00 0.00 0.00 2.97
252 253 5.067805 GGCAAGGATGTGGGTCTTTTTATAG 59.932 44.000 0.00 0.00 0.00 1.31
253 254 4.953579 GGCAAGGATGTGGGTCTTTTTATA 59.046 41.667 0.00 0.00 0.00 0.98
254 255 3.769300 GGCAAGGATGTGGGTCTTTTTAT 59.231 43.478 0.00 0.00 0.00 1.40
255 256 3.161866 GGCAAGGATGTGGGTCTTTTTA 58.838 45.455 0.00 0.00 0.00 1.52
256 257 1.970640 GGCAAGGATGTGGGTCTTTTT 59.029 47.619 0.00 0.00 0.00 1.94
257 258 1.632589 GGCAAGGATGTGGGTCTTTT 58.367 50.000 0.00 0.00 0.00 2.27
258 259 0.609131 CGGCAAGGATGTGGGTCTTT 60.609 55.000 0.00 0.00 0.00 2.52
259 260 1.002134 CGGCAAGGATGTGGGTCTT 60.002 57.895 0.00 0.00 0.00 3.01
260 261 2.671070 CGGCAAGGATGTGGGTCT 59.329 61.111 0.00 0.00 0.00 3.85
261 262 3.134127 GCGGCAAGGATGTGGGTC 61.134 66.667 0.00 0.00 0.00 4.46
262 263 4.740822 GGCGGCAAGGATGTGGGT 62.741 66.667 3.07 0.00 0.00 4.51
263 264 4.738998 TGGCGGCAAGGATGTGGG 62.739 66.667 10.22 0.00 0.00 4.61
264 265 0.751277 TATTGGCGGCAAGGATGTGG 60.751 55.000 28.83 0.00 0.00 4.17
265 266 0.664761 CTATTGGCGGCAAGGATGTG 59.335 55.000 28.83 11.33 0.00 3.21
266 267 1.103398 GCTATTGGCGGCAAGGATGT 61.103 55.000 28.83 14.75 0.00 3.06
267 268 1.656441 GCTATTGGCGGCAAGGATG 59.344 57.895 28.83 18.25 0.00 3.51
268 269 1.529244 GGCTATTGGCGGCAAGGAT 60.529 57.895 28.83 15.50 42.94 3.24
269 270 2.124320 GGCTATTGGCGGCAAGGA 60.124 61.111 28.83 18.12 42.94 3.36
270 271 1.728490 GAAGGCTATTGGCGGCAAGG 61.728 60.000 28.83 23.00 44.18 3.61
271 272 1.031571 TGAAGGCTATTGGCGGCAAG 61.032 55.000 28.83 17.79 44.18 4.01
272 273 1.001517 TGAAGGCTATTGGCGGCAA 60.002 52.632 27.57 27.57 44.18 4.52
273 274 1.748879 GTGAAGGCTATTGGCGGCA 60.749 57.895 7.97 7.97 44.18 5.69
274 275 0.179056 TAGTGAAGGCTATTGGCGGC 60.179 55.000 0.00 0.00 44.18 6.53
275 276 2.224281 TGATAGTGAAGGCTATTGGCGG 60.224 50.000 0.00 0.00 44.18 6.13
276 277 2.802816 GTGATAGTGAAGGCTATTGGCG 59.197 50.000 0.00 0.00 44.18 5.69
277 278 2.802816 CGTGATAGTGAAGGCTATTGGC 59.197 50.000 0.00 0.00 40.90 4.52
278 279 3.181465 ACCGTGATAGTGAAGGCTATTGG 60.181 47.826 0.00 0.00 32.32 3.16
279 280 3.804325 CACCGTGATAGTGAAGGCTATTG 59.196 47.826 0.00 0.00 37.42 1.90
280 281 3.181465 CCACCGTGATAGTGAAGGCTATT 60.181 47.826 0.00 0.00 37.42 1.73
281 282 2.365617 CCACCGTGATAGTGAAGGCTAT 59.634 50.000 0.00 0.00 37.42 2.97
282 283 1.754803 CCACCGTGATAGTGAAGGCTA 59.245 52.381 0.00 0.00 37.42 3.93
283 284 0.537188 CCACCGTGATAGTGAAGGCT 59.463 55.000 0.00 0.00 37.42 4.58
284 285 0.462047 CCCACCGTGATAGTGAAGGC 60.462 60.000 0.00 0.00 37.42 4.35
285 286 0.902531 ACCCACCGTGATAGTGAAGG 59.097 55.000 0.00 0.00 37.42 3.46
286 287 1.548719 TCACCCACCGTGATAGTGAAG 59.451 52.381 13.41 0.00 46.80 3.02
287 288 1.634960 TCACCCACCGTGATAGTGAA 58.365 50.000 13.41 2.53 46.80 3.18
288 289 3.367288 TCACCCACCGTGATAGTGA 57.633 52.632 12.33 12.33 46.80 3.41
295 296 2.357034 CCGAGTTCACCCACCGTG 60.357 66.667 0.00 0.00 44.50 4.94
296 297 2.841044 ACCGAGTTCACCCACCGT 60.841 61.111 0.00 0.00 0.00 4.83
297 298 2.167398 ATCACCGAGTTCACCCACCG 62.167 60.000 0.00 0.00 0.00 4.94
298 299 0.673644 CATCACCGAGTTCACCCACC 60.674 60.000 0.00 0.00 0.00 4.61
299 300 0.034896 ACATCACCGAGTTCACCCAC 59.965 55.000 0.00 0.00 0.00 4.61
300 301 0.762418 AACATCACCGAGTTCACCCA 59.238 50.000 0.00 0.00 0.00 4.51
301 302 1.002087 AGAACATCACCGAGTTCACCC 59.998 52.381 7.88 0.00 44.94 4.61
302 303 2.338500 GAGAACATCACCGAGTTCACC 58.662 52.381 7.88 0.00 44.94 4.02
303 304 1.986378 CGAGAACATCACCGAGTTCAC 59.014 52.381 7.88 1.21 44.94 3.18
304 305 1.067846 CCGAGAACATCACCGAGTTCA 60.068 52.381 7.88 0.00 44.94 3.18
305 306 1.630148 CCGAGAACATCACCGAGTTC 58.370 55.000 0.00 0.00 43.33 3.01
306 307 0.246635 CCCGAGAACATCACCGAGTT 59.753 55.000 0.00 0.00 0.00 3.01
307 308 1.605058 CCCCGAGAACATCACCGAGT 61.605 60.000 0.00 0.00 0.00 4.18
308 309 1.141881 CCCCGAGAACATCACCGAG 59.858 63.158 0.00 0.00 0.00 4.63
309 310 0.901114 TTCCCCGAGAACATCACCGA 60.901 55.000 0.00 0.00 0.00 4.69
310 311 0.460284 CTTCCCCGAGAACATCACCG 60.460 60.000 0.00 0.00 0.00 4.94
311 312 0.744771 GCTTCCCCGAGAACATCACC 60.745 60.000 0.00 0.00 0.00 4.02
312 313 0.036388 TGCTTCCCCGAGAACATCAC 60.036 55.000 0.00 0.00 0.00 3.06
313 314 0.250234 CTGCTTCCCCGAGAACATCA 59.750 55.000 0.00 0.00 0.00 3.07
314 315 0.250513 ACTGCTTCCCCGAGAACATC 59.749 55.000 0.00 0.00 0.00 3.06
315 316 0.036010 CACTGCTTCCCCGAGAACAT 60.036 55.000 0.00 0.00 0.00 2.71
316 317 1.118965 TCACTGCTTCCCCGAGAACA 61.119 55.000 0.00 0.00 0.00 3.18
317 318 0.390472 CTCACTGCTTCCCCGAGAAC 60.390 60.000 0.00 0.00 0.00 3.01
318 319 0.541998 TCTCACTGCTTCCCCGAGAA 60.542 55.000 0.00 0.00 30.04 2.87
319 320 0.324738 ATCTCACTGCTTCCCCGAGA 60.325 55.000 0.00 0.00 37.16 4.04
320 321 0.103937 GATCTCACTGCTTCCCCGAG 59.896 60.000 0.00 0.00 0.00 4.63
321 322 1.330655 GGATCTCACTGCTTCCCCGA 61.331 60.000 0.00 0.00 0.00 5.14
322 323 1.144936 GGATCTCACTGCTTCCCCG 59.855 63.158 0.00 0.00 0.00 5.73
323 324 0.467804 GAGGATCTCACTGCTTCCCC 59.532 60.000 0.00 0.00 0.00 4.81
324 325 0.103937 CGAGGATCTCACTGCTTCCC 59.896 60.000 0.00 0.00 0.00 3.97
325 326 1.066908 CTCGAGGATCTCACTGCTTCC 59.933 57.143 3.91 0.00 0.00 3.46
326 327 2.020720 TCTCGAGGATCTCACTGCTTC 58.979 52.381 13.56 0.00 0.00 3.86
327 328 2.136298 TCTCGAGGATCTCACTGCTT 57.864 50.000 13.56 0.00 0.00 3.91
328 329 2.023673 CTTCTCGAGGATCTCACTGCT 58.976 52.381 13.56 0.00 0.00 4.24
329 330 1.535860 GCTTCTCGAGGATCTCACTGC 60.536 57.143 13.56 0.00 0.00 4.40
330 331 1.268488 CGCTTCTCGAGGATCTCACTG 60.268 57.143 13.56 0.00 41.67 3.66
331 332 1.021202 CGCTTCTCGAGGATCTCACT 58.979 55.000 13.56 0.00 41.67 3.41
332 333 0.593773 GCGCTTCTCGAGGATCTCAC 60.594 60.000 13.56 0.00 41.67 3.51
333 334 0.749818 AGCGCTTCTCGAGGATCTCA 60.750 55.000 13.56 0.00 41.67 3.27
334 335 0.317770 CAGCGCTTCTCGAGGATCTC 60.318 60.000 7.50 0.00 41.67 2.75
335 336 1.732917 CAGCGCTTCTCGAGGATCT 59.267 57.895 7.50 0.00 41.67 2.75
336 337 1.299773 CCAGCGCTTCTCGAGGATC 60.300 63.158 7.50 0.00 41.67 3.36
337 338 0.752009 TACCAGCGCTTCTCGAGGAT 60.752 55.000 7.50 0.00 41.67 3.24
338 339 0.963856 TTACCAGCGCTTCTCGAGGA 60.964 55.000 7.50 1.83 41.67 3.71
339 340 0.108804 TTTACCAGCGCTTCTCGAGG 60.109 55.000 7.50 7.57 41.67 4.63
340 341 1.710013 TTTTACCAGCGCTTCTCGAG 58.290 50.000 7.50 5.93 41.67 4.04
341 342 1.796459 GTTTTTACCAGCGCTTCTCGA 59.204 47.619 7.50 0.00 41.67 4.04
342 343 1.798813 AGTTTTTACCAGCGCTTCTCG 59.201 47.619 7.50 0.00 42.12 4.04
343 344 2.548480 ACAGTTTTTACCAGCGCTTCTC 59.452 45.455 7.50 0.00 0.00 2.87
344 345 2.572290 ACAGTTTTTACCAGCGCTTCT 58.428 42.857 7.50 0.00 0.00 2.85
345 346 3.349488 AACAGTTTTTACCAGCGCTTC 57.651 42.857 7.50 0.00 0.00 3.86
346 347 3.443976 CAAACAGTTTTTACCAGCGCTT 58.556 40.909 7.50 0.00 0.00 4.68
347 348 2.798145 GCAAACAGTTTTTACCAGCGCT 60.798 45.455 2.64 2.64 0.00 5.92
348 349 1.521006 GCAAACAGTTTTTACCAGCGC 59.479 47.619 0.00 0.00 0.00 5.92
349 350 2.803451 TGCAAACAGTTTTTACCAGCG 58.197 42.857 0.00 0.00 0.00 5.18
350 351 3.494251 CCATGCAAACAGTTTTTACCAGC 59.506 43.478 0.00 0.00 0.00 4.85
351 352 4.942852 TCCATGCAAACAGTTTTTACCAG 58.057 39.130 0.00 0.00 0.00 4.00
352 353 5.163364 ACATCCATGCAAACAGTTTTTACCA 60.163 36.000 0.00 0.00 0.00 3.25
353 354 5.296748 ACATCCATGCAAACAGTTTTTACC 58.703 37.500 0.00 0.00 0.00 2.85
354 355 6.478344 TGAACATCCATGCAAACAGTTTTTAC 59.522 34.615 0.00 0.00 0.00 2.01
355 356 6.577103 TGAACATCCATGCAAACAGTTTTTA 58.423 32.000 0.00 0.00 0.00 1.52
356 357 5.426504 TGAACATCCATGCAAACAGTTTTT 58.573 33.333 0.00 0.00 0.00 1.94
357 358 5.021033 TGAACATCCATGCAAACAGTTTT 57.979 34.783 0.00 0.00 0.00 2.43
358 359 4.669206 TGAACATCCATGCAAACAGTTT 57.331 36.364 0.00 0.00 0.00 2.66
359 360 4.877378 ATGAACATCCATGCAAACAGTT 57.123 36.364 0.00 0.00 0.00 3.16
360 361 4.877378 AATGAACATCCATGCAAACAGT 57.123 36.364 0.00 0.00 0.00 3.55
361 362 6.548441 AAAAATGAACATCCATGCAAACAG 57.452 33.333 0.00 0.00 0.00 3.16
393 394 2.083774 ACCAATGCACATACGAAGGTG 58.916 47.619 0.00 0.00 40.37 4.00
401 402 1.543607 CCACCACACCAATGCACATA 58.456 50.000 0.00 0.00 0.00 2.29
457 459 5.688823 TCAAGAAATGTACATGCAAAGACG 58.311 37.500 9.63 0.00 0.00 4.18
488 490 1.266989 GTGTTCGGGCCTTTTTCTCTG 59.733 52.381 0.84 0.00 0.00 3.35
495 497 1.040339 TTTGCTGTGTTCGGGCCTTT 61.040 50.000 0.84 0.00 0.00 3.11
497 499 1.040339 TTTTTGCTGTGTTCGGGCCT 61.040 50.000 0.84 0.00 0.00 5.19
592 594 2.105806 GACGGATGGATGCCCCTCTC 62.106 65.000 0.00 0.00 35.38 3.20
731 733 3.339093 GAGGGGGTGAAGGTGGGG 61.339 72.222 0.00 0.00 0.00 4.96
779 781 0.729140 CTTTGCTTTACTTGGCGCGG 60.729 55.000 8.83 0.00 0.00 6.46
908 911 2.136191 CGTTTCGTCTCCGTCGTCG 61.136 63.158 0.00 0.00 35.01 5.12
913 916 1.206072 CGTCTCGTTTCGTCTCCGT 59.794 57.895 0.00 0.00 35.01 4.69
923 926 0.319641 GGCTGTTTCCTCGTCTCGTT 60.320 55.000 0.00 0.00 0.00 3.85
927 930 1.006102 CGTGGCTGTTTCCTCGTCT 60.006 57.895 0.00 0.00 38.06 4.18
928 931 2.668280 GCGTGGCTGTTTCCTCGTC 61.668 63.158 6.21 0.00 42.95 4.20
929 932 2.665185 GCGTGGCTGTTTCCTCGT 60.665 61.111 6.21 0.00 42.95 4.18
958 961 4.404654 GCAGAAACCCGCGGCTTG 62.405 66.667 22.85 9.35 0.00 4.01
975 978 1.585668 GATCGCGTCACATGAACTCTG 59.414 52.381 5.77 0.00 0.00 3.35
1099 1111 2.173382 GCACATGTGGAACGACGC 59.827 61.111 26.55 6.37 42.39 5.19
1305 1317 4.738345 AGCAGCGACGACGACGAC 62.738 66.667 22.94 13.66 42.66 4.34
1593 1630 6.481434 TTTTCTTGCCTAGTATACTCCCTC 57.519 41.667 9.12 0.00 0.00 4.30
1596 1633 9.141400 CGATAATTTTCTTGCCTAGTATACTCC 57.859 37.037 9.12 0.01 0.00 3.85
1598 1635 7.603024 GCCGATAATTTTCTTGCCTAGTATACT 59.397 37.037 10.87 10.87 0.00 2.12
1600 1637 7.446769 TGCCGATAATTTTCTTGCCTAGTATA 58.553 34.615 0.00 0.00 0.00 1.47
1601 1638 6.296026 TGCCGATAATTTTCTTGCCTAGTAT 58.704 36.000 0.00 0.00 0.00 2.12
1689 1736 4.576463 GCAGTTTACATCCTCCCAATACTG 59.424 45.833 0.00 0.00 34.97 2.74
1696 1746 2.789409 ACTGCAGTTTACATCCTCCC 57.211 50.000 15.25 0.00 0.00 4.30
1830 1880 5.581085 ACATTACAGTTCGAGTAGCATTTCC 59.419 40.000 0.00 0.00 0.00 3.13
1835 1885 6.445357 TGATACATTACAGTTCGAGTAGCA 57.555 37.500 0.00 0.00 0.00 3.49
1836 1886 6.918569 ACATGATACATTACAGTTCGAGTAGC 59.081 38.462 0.00 0.00 0.00 3.58
1893 1943 0.183492 TGGACATAAGCAGATGGGGC 59.817 55.000 3.26 0.00 0.00 5.80
1895 1945 2.437281 ACTCTGGACATAAGCAGATGGG 59.563 50.000 3.26 0.00 0.00 4.00
1896 1946 3.464907 CACTCTGGACATAAGCAGATGG 58.535 50.000 3.26 0.00 0.00 3.51
1897 1947 3.133542 TCCACTCTGGACATAAGCAGATG 59.866 47.826 0.00 0.00 42.67 2.90
1898 1948 3.378512 TCCACTCTGGACATAAGCAGAT 58.621 45.455 0.00 0.00 42.67 2.90
1899 1949 2.820178 TCCACTCTGGACATAAGCAGA 58.180 47.619 0.00 0.00 42.67 4.26
1909 1959 6.824305 GAAATTCTGAATTTCCACTCTGGA 57.176 37.500 31.54 0.00 46.98 3.86
1918 1968 8.248945 ACATCCATGTCTGAAATTCTGAATTTC 58.751 33.333 33.41 33.41 45.29 2.17
1919 1969 8.130671 ACATCCATGTCTGAAATTCTGAATTT 57.869 30.769 24.16 24.16 39.10 1.82
1920 1970 7.713734 ACATCCATGTCTGAAATTCTGAATT 57.286 32.000 9.76 9.76 35.87 2.17
1935 1985 2.768253 TTCTCTTGCGACATCCATGT 57.232 45.000 0.00 0.00 45.16 3.21
1936 1986 3.005554 ACTTTCTCTTGCGACATCCATG 58.994 45.455 0.00 0.00 0.00 3.66
1937 1987 3.005554 CACTTTCTCTTGCGACATCCAT 58.994 45.455 0.00 0.00 0.00 3.41
1938 1988 2.416747 CACTTTCTCTTGCGACATCCA 58.583 47.619 0.00 0.00 0.00 3.41
1939 1989 1.129437 GCACTTTCTCTTGCGACATCC 59.871 52.381 0.00 0.00 0.00 3.51
1940 1990 1.800586 TGCACTTTCTCTTGCGACATC 59.199 47.619 0.00 0.00 41.96 3.06
1941 1991 1.802960 CTGCACTTTCTCTTGCGACAT 59.197 47.619 0.00 0.00 41.96 3.06
1942 1992 1.220529 CTGCACTTTCTCTTGCGACA 58.779 50.000 0.00 0.00 41.96 4.35
1943 1993 1.221414 ACTGCACTTTCTCTTGCGAC 58.779 50.000 0.00 0.00 41.96 5.19
1944 1994 1.867233 GAACTGCACTTTCTCTTGCGA 59.133 47.619 0.00 0.00 41.96 5.10
1945 1995 1.599071 TGAACTGCACTTTCTCTTGCG 59.401 47.619 5.19 0.00 41.96 4.85
1946 1996 2.031333 CCTGAACTGCACTTTCTCTTGC 60.031 50.000 5.19 0.00 39.33 4.01
1947 1997 2.031333 GCCTGAACTGCACTTTCTCTTG 60.031 50.000 5.19 0.00 0.00 3.02
1948 1998 2.225467 GCCTGAACTGCACTTTCTCTT 58.775 47.619 5.19 0.00 0.00 2.85
1949 1999 1.544314 GGCCTGAACTGCACTTTCTCT 60.544 52.381 0.00 0.00 0.00 3.10
1950 2000 0.877743 GGCCTGAACTGCACTTTCTC 59.122 55.000 0.00 0.00 0.00 2.87
1951 2001 0.183492 TGGCCTGAACTGCACTTTCT 59.817 50.000 3.32 0.00 0.00 2.52
1952 2002 1.032014 TTGGCCTGAACTGCACTTTC 58.968 50.000 3.32 0.00 0.00 2.62
1953 2003 0.746659 GTTGGCCTGAACTGCACTTT 59.253 50.000 3.32 0.00 0.00 2.66
1954 2004 0.395586 TGTTGGCCTGAACTGCACTT 60.396 50.000 3.32 0.00 0.00 3.16
1955 2005 0.395586 TTGTTGGCCTGAACTGCACT 60.396 50.000 3.32 0.00 0.00 4.40
1956 2006 0.459489 TTTGTTGGCCTGAACTGCAC 59.541 50.000 3.32 0.00 0.00 4.57
1957 2007 1.189752 TTTTGTTGGCCTGAACTGCA 58.810 45.000 3.32 0.00 0.00 4.41
1958 2008 1.933181 GTTTTTGTTGGCCTGAACTGC 59.067 47.619 3.32 0.00 0.00 4.40
1959 2009 3.189285 CAGTTTTTGTTGGCCTGAACTG 58.811 45.455 3.32 10.98 38.34 3.16
1960 2010 2.168313 CCAGTTTTTGTTGGCCTGAACT 59.832 45.455 3.32 2.38 0.00 3.01
1961 2011 2.167487 TCCAGTTTTTGTTGGCCTGAAC 59.833 45.455 3.32 0.75 34.38 3.18
1962 2012 2.430332 CTCCAGTTTTTGTTGGCCTGAA 59.570 45.455 3.32 0.00 34.38 3.02
1963 2013 2.031120 CTCCAGTTTTTGTTGGCCTGA 58.969 47.619 3.32 0.00 34.38 3.86
1964 2014 1.538849 GCTCCAGTTTTTGTTGGCCTG 60.539 52.381 3.32 0.00 34.38 4.85
1965 2015 0.752658 GCTCCAGTTTTTGTTGGCCT 59.247 50.000 3.32 0.00 34.38 5.19
1966 2016 0.597377 CGCTCCAGTTTTTGTTGGCC 60.597 55.000 0.00 0.00 34.38 5.36
1967 2017 0.383949 TCGCTCCAGTTTTTGTTGGC 59.616 50.000 0.00 0.00 34.38 4.52
1968 2018 2.861462 TTCGCTCCAGTTTTTGTTGG 57.139 45.000 0.00 0.00 35.74 3.77
1969 2019 4.207019 GTGATTTCGCTCCAGTTTTTGTTG 59.793 41.667 0.00 0.00 0.00 3.33
1970 2020 4.097892 AGTGATTTCGCTCCAGTTTTTGTT 59.902 37.500 0.00 0.00 29.29 2.83
1971 2021 3.632145 AGTGATTTCGCTCCAGTTTTTGT 59.368 39.130 0.00 0.00 29.29 2.83
1972 2022 4.222114 GAGTGATTTCGCTCCAGTTTTTG 58.778 43.478 9.50 0.00 45.19 2.44
1973 2023 4.489679 GAGTGATTTCGCTCCAGTTTTT 57.510 40.909 9.50 0.00 45.19 1.94
1982 2032 2.828520 TCAGAGAAGGAGTGATTTCGCT 59.171 45.455 0.00 0.00 39.79 4.93
1983 2033 3.238108 TCAGAGAAGGAGTGATTTCGC 57.762 47.619 0.00 0.00 0.00 4.70
1984 2034 4.560128 TGTTCAGAGAAGGAGTGATTTCG 58.440 43.478 0.00 0.00 0.00 3.46
1985 2035 7.064016 GTGTATGTTCAGAGAAGGAGTGATTTC 59.936 40.741 0.00 0.00 0.00 2.17
1986 2036 6.876257 GTGTATGTTCAGAGAAGGAGTGATTT 59.124 38.462 0.00 0.00 0.00 2.17
1987 2037 6.212388 AGTGTATGTTCAGAGAAGGAGTGATT 59.788 38.462 0.00 0.00 0.00 2.57
1988 2038 5.719085 AGTGTATGTTCAGAGAAGGAGTGAT 59.281 40.000 0.00 0.00 0.00 3.06
1989 2039 5.047731 CAGTGTATGTTCAGAGAAGGAGTGA 60.048 44.000 0.00 0.00 0.00 3.41
1990 2040 5.047731 TCAGTGTATGTTCAGAGAAGGAGTG 60.048 44.000 0.00 0.00 0.00 3.51
1991 2041 5.080337 TCAGTGTATGTTCAGAGAAGGAGT 58.920 41.667 0.00 0.00 0.00 3.85
2013 2063 4.577693 AGGGTTCGTGGTTTTAAAAGACTC 59.422 41.667 0.00 0.00 0.00 3.36
2033 2083 6.773976 TGGTTCTTATATTCTTTGCAAGGG 57.226 37.500 8.88 2.01 0.00 3.95
2152 2213 2.024176 AAGCGATCGGTGTTTGCTAT 57.976 45.000 22.01 0.00 32.55 2.97
2210 2278 2.779506 GTTTCCACCTTCTTCACGGAT 58.220 47.619 0.00 0.00 0.00 4.18
2211 2279 1.539496 CGTTTCCACCTTCTTCACGGA 60.539 52.381 0.00 0.00 0.00 4.69
2222 2328 2.054140 TTTCGTGCAGCGTTTCCACC 62.054 55.000 8.22 0.00 42.13 4.61
2237 2343 4.601019 TCTTTCTTGCTTGCTTTCTTTCG 58.399 39.130 0.00 0.00 0.00 3.46
2247 2353 5.981315 TGCATTTCTCTTTCTTTCTTGCTTG 59.019 36.000 0.00 0.00 0.00 4.01
2251 2357 6.422701 TGCATTGCATTTCTCTTTCTTTCTTG 59.577 34.615 7.38 0.00 31.71 3.02
2274 2392 0.105039 CGATTCCTACCCTGTCCTGC 59.895 60.000 0.00 0.00 0.00 4.85
2302 2427 5.997746 TCTGTATACTATCATGGCCAAAAGC 59.002 40.000 10.96 0.00 42.60 3.51
2342 2467 1.727335 CGGCCGAAAGAGAAGAAAGAC 59.273 52.381 24.07 0.00 0.00 3.01
2429 2554 2.713927 CTTGGGGGCGGTTGCTTTTG 62.714 60.000 0.00 0.00 42.25 2.44
2441 2566 4.210331 CAAGAATCTGGAATACTTGGGGG 58.790 47.826 0.00 0.00 35.70 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.