Multiple sequence alignment - TraesCS6A01G321900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G321900 chr6A 100.000 6989 0 0 1 6989 555989745 555982757 0.000000e+00 12907.0
1 TraesCS6A01G321900 chr6D 95.389 5140 180 31 401 5507 411407963 411402848 0.000000e+00 8126.0
2 TraesCS6A01G321900 chr6D 86.047 1204 111 22 5771 6946 411402240 411401066 0.000000e+00 1240.0
3 TraesCS6A01G321900 chr6D 92.620 271 7 2 5507 5767 411402763 411402496 1.840000e-100 377.0
4 TraesCS6A01G321900 chr6B 94.009 3038 128 23 3233 6253 618334868 618331868 0.000000e+00 4553.0
5 TraesCS6A01G321900 chr6B 91.103 1360 68 19 747 2072 618337565 618336225 0.000000e+00 1792.0
6 TraesCS6A01G321900 chr6B 93.322 1183 56 6 2067 3232 618336205 618335029 0.000000e+00 1725.0
7 TraesCS6A01G321900 chr6B 92.829 1032 50 5 5001 6019 618325976 618324956 0.000000e+00 1474.0
8 TraesCS6A01G321900 chr6B 83.911 404 46 13 6556 6946 618169714 618169317 1.110000e-97 368.0
9 TraesCS6A01G321900 chr6B 90.678 236 20 2 6147 6382 618170437 618170204 5.260000e-81 313.0
10 TraesCS6A01G321900 chr6B 91.538 130 8 2 6026 6152 618300067 618299938 7.200000e-40 176.0
11 TraesCS6A01G321900 chr3D 85.241 2114 221 42 1540 3606 527208125 527210194 0.000000e+00 2091.0
12 TraesCS6A01G321900 chr3D 82.661 2232 249 59 1511 3696 527217426 527219565 0.000000e+00 1851.0
13 TraesCS6A01G321900 chr3D 90.783 651 54 6 4782 5431 527220781 527221426 0.000000e+00 865.0
14 TraesCS6A01G321900 chr3D 89.329 656 63 6 4782 5434 527211446 527212097 0.000000e+00 817.0
15 TraesCS6A01G321900 chr3D 88.212 509 52 6 4227 4731 527210925 527211429 1.000000e-167 601.0
16 TraesCS6A01G321900 chr3D 84.673 535 46 13 3714 4231 527210336 527210851 1.050000e-137 501.0
17 TraesCS6A01G321900 chr3D 82.703 555 52 21 3704 4233 527219627 527220162 2.970000e-123 453.0
18 TraesCS6A01G321900 chr3D 81.958 521 55 20 4227 4731 527220267 527220764 8.440000e-109 405.0
19 TraesCS6A01G321900 chr3D 86.111 288 28 8 996 1276 527206208 527206490 4.100000e-77 300.0
20 TraesCS6A01G321900 chr3D 88.710 248 17 1 126 373 68884824 68885060 6.860000e-75 292.0
21 TraesCS6A01G321900 chr3D 83.108 296 43 7 998 1288 527216969 527217262 5.380000e-66 263.0
22 TraesCS6A01G321900 chr3B 84.722 1656 205 22 1527 3178 697463128 697464739 0.000000e+00 1613.0
23 TraesCS6A01G321900 chr3B 82.108 1822 224 55 4227 6034 697465901 697467634 0.000000e+00 1465.0
24 TraesCS6A01G321900 chr3B 90.328 641 57 5 4795 5434 697155112 697155748 0.000000e+00 835.0
25 TraesCS6A01G321900 chr3B 85.342 730 69 15 2896 3606 697153130 697153840 0.000000e+00 721.0
26 TraesCS6A01G321900 chr3B 88.039 510 49 10 4227 4731 697154580 697155082 1.680000e-165 593.0
27 TraesCS6A01G321900 chr3B 84.436 559 49 17 3706 4245 697153954 697154493 3.740000e-142 516.0
28 TraesCS6A01G321900 chr3B 83.912 547 51 18 3706 4234 697465277 697465804 8.150000e-134 488.0
29 TraesCS6A01G321900 chr3B 86.316 285 24 5 3344 3620 697464838 697465115 5.300000e-76 296.0
30 TraesCS6A01G321900 chr3B 86.121 281 26 11 996 1276 697152170 697152437 2.470000e-74 291.0
31 TraesCS6A01G321900 chr3B 90.667 75 7 0 3620 3694 697465141 697465215 4.460000e-17 100.0
32 TraesCS6A01G321900 chr3A 85.114 1357 151 25 1520 2854 661954648 661955975 0.000000e+00 1339.0
33 TraesCS6A01G321900 chr3A 84.308 1351 154 24 1540 2860 661929336 661930658 0.000000e+00 1267.0
34 TraesCS6A01G321900 chr3A 87.209 1118 120 14 2068 3178 661968712 661969813 0.000000e+00 1251.0
35 TraesCS6A01G321900 chr3A 82.571 1268 146 41 4782 6036 661971404 661972609 0.000000e+00 1048.0
36 TraesCS6A01G321900 chr3A 89.771 655 56 8 4782 5434 661957622 661958267 0.000000e+00 828.0
37 TraesCS6A01G321900 chr3A 89.329 656 63 6 4782 5434 661932891 661933542 0.000000e+00 817.0
38 TraesCS6A01G321900 chr3A 86.837 509 56 8 4227 4731 661932373 661932874 6.120000e-155 558.0
39 TraesCS6A01G321900 chr3A 82.128 705 69 25 2999 3693 661956030 661956687 1.020000e-152 551.0
40 TraesCS6A01G321900 chr3A 83.912 547 49 13 3714 4241 661931756 661932282 2.930000e-133 486.0
41 TraesCS6A01G321900 chr3A 83.794 506 56 14 4227 4731 661970907 661971387 2.300000e-124 457.0
42 TraesCS6A01G321900 chr3A 83.058 484 47 17 3233 3705 661931236 661931695 2.350000e-109 407.0
43 TraesCS6A01G321900 chr3A 82.590 471 42 17 3232 3694 661969821 661970259 5.120000e-101 379.0
44 TraesCS6A01G321900 chr3A 87.316 339 29 5 3712 4045 661970330 661970659 6.620000e-100 375.0
45 TraesCS6A01G321900 chr3A 86.744 347 31 7 3710 4051 661956760 661957096 8.560000e-99 372.0
46 TraesCS6A01G321900 chr3A 84.746 295 33 7 998 1290 661927415 661927699 1.150000e-72 285.0
47 TraesCS6A01G321900 chr3A 82.993 294 47 3 998 1288 661954181 661954474 5.380000e-66 263.0
48 TraesCS6A01G321900 chr4B 80.521 729 127 11 2095 2811 166764361 166763636 4.770000e-151 545.0
49 TraesCS6A01G321900 chrUn 80.328 732 129 11 2092 2811 216299594 216300322 2.220000e-149 540.0
50 TraesCS6A01G321900 chr4D 80.328 732 129 11 2092 2811 131327227 131327955 2.220000e-149 540.0
51 TraesCS6A01G321900 chr5B 84.061 458 73 0 1610 2067 577948127 577948584 6.430000e-120 442.0
52 TraesCS6A01G321900 chr5B 77.453 479 82 21 3225 3693 577949480 577949942 5.380000e-66 263.0
53 TraesCS6A01G321900 chr5B 82.927 287 37 11 994 1271 577946938 577947221 1.510000e-61 248.0
54 TraesCS6A01G321900 chr5B 81.377 247 45 1 129 374 678625918 678625672 4.280000e-47 200.0
55 TraesCS6A01G321900 chr5B 82.500 80 11 1 5494 5570 577953802 577953881 4.520000e-07 67.6
56 TraesCS6A01G321900 chr5D 83.406 458 76 0 1610 2067 470751452 470751909 6.480000e-115 425.0
57 TraesCS6A01G321900 chr5D 81.211 479 66 20 3225 3693 470485922 470486386 1.430000e-96 364.0
58 TraesCS6A01G321900 chr5D 76.987 478 88 18 3225 3693 470752805 470753269 3.240000e-63 254.0
59 TraesCS6A01G321900 chr5D 82.500 80 10 2 5494 5570 470757470 470757548 4.520000e-07 67.6
60 TraesCS6A01G321900 chr2D 93.089 246 17 0 126 371 639729678 639729923 1.850000e-95 361.0
61 TraesCS6A01G321900 chr1A 89.388 245 26 0 129 373 372647819 372647575 6.810000e-80 309.0
62 TraesCS6A01G321900 chr7B 81.304 230 31 11 1051 1271 141960441 141960215 7.200000e-40 176.0
63 TraesCS6A01G321900 chr7A 86.667 60 4 4 6606 6663 653364658 653364601 5.850000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G321900 chr6A 555982757 555989745 6988 True 12907.000000 12907 100.000000 1 6989 1 chr6A.!!$R1 6988
1 TraesCS6A01G321900 chr6D 411401066 411407963 6897 True 3247.666667 8126 91.352000 401 6946 3 chr6D.!!$R1 6545
2 TraesCS6A01G321900 chr6B 618331868 618337565 5697 True 2690.000000 4553 92.811333 747 6253 3 chr6B.!!$R4 5506
3 TraesCS6A01G321900 chr6B 618324956 618325976 1020 True 1474.000000 1474 92.829000 5001 6019 1 chr6B.!!$R2 1018
4 TraesCS6A01G321900 chr6B 618169317 618170437 1120 True 340.500000 368 87.294500 6147 6946 2 chr6B.!!$R3 799
5 TraesCS6A01G321900 chr3D 527206208 527212097 5889 False 862.000000 2091 86.713200 996 5434 5 chr3D.!!$F2 4438
6 TraesCS6A01G321900 chr3D 527216969 527221426 4457 False 767.400000 1851 84.242600 998 5431 5 chr3D.!!$F3 4433
7 TraesCS6A01G321900 chr3B 697463128 697467634 4506 False 792.400000 1613 85.545000 1527 6034 5 chr3B.!!$F2 4507
8 TraesCS6A01G321900 chr3B 697152170 697155748 3578 False 591.200000 835 86.853200 996 5434 5 chr3B.!!$F1 4438
9 TraesCS6A01G321900 chr3A 661968712 661972609 3897 False 702.000000 1251 84.696000 2068 6036 5 chr3A.!!$F3 3968
10 TraesCS6A01G321900 chr3A 661954181 661958267 4086 False 670.600000 1339 85.350000 998 5434 5 chr3A.!!$F2 4436
11 TraesCS6A01G321900 chr3A 661927415 661933542 6127 False 636.666667 1267 85.365000 998 5434 6 chr3A.!!$F1 4436
12 TraesCS6A01G321900 chr4B 166763636 166764361 725 True 545.000000 545 80.521000 2095 2811 1 chr4B.!!$R1 716
13 TraesCS6A01G321900 chrUn 216299594 216300322 728 False 540.000000 540 80.328000 2092 2811 1 chrUn.!!$F1 719
14 TraesCS6A01G321900 chr4D 131327227 131327955 728 False 540.000000 540 80.328000 2092 2811 1 chr4D.!!$F1 719
15 TraesCS6A01G321900 chr5B 577946938 577953881 6943 False 255.150000 442 81.735250 994 5570 4 chr5B.!!$F1 4576
16 TraesCS6A01G321900 chr5D 470751452 470753269 1817 False 339.500000 425 80.196500 1610 3693 2 chr5D.!!$F3 2083

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.036388 CAAGCTTCTAGGCCGTTGGA 60.036 55.000 0.00 0.00 0.00 3.53 F
357 358 0.106819 AGCATCTAAGGCTTGGCAGG 60.107 55.000 10.69 0.95 38.81 4.85 F
358 359 0.107017 GCATCTAAGGCTTGGCAGGA 60.107 55.000 10.69 0.95 0.00 3.86 F
366 367 0.110104 GGCTTGGCAGGAGCAGATAT 59.890 55.000 12.83 0.00 44.61 1.63 F
664 670 0.175760 TCCAATTCGAGCTTCCCGAG 59.824 55.000 0.00 0.00 37.35 4.63 F
1863 3678 0.783850 ATGGTAGTTTGGTGGGCCTT 59.216 50.000 4.53 0.00 35.27 4.35 F
2347 4217 1.032114 GTGGCCCAAGAGAAATCCCG 61.032 60.000 0.00 0.00 0.00 5.14 F
3432 5696 3.135712 TGGTATGGCTCGGTATGTCATTT 59.864 43.478 0.00 0.00 0.00 2.32 F
5396 9757 1.484240 GTGGGAGCTTGCTACTCAGAT 59.516 52.381 4.72 0.00 35.79 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2002 3823 0.606673 GGAGGTTGCTGGGAGTGAAC 60.607 60.000 0.00 0.00 0.00 3.18 R
2347 4217 0.380378 TGTTTTGCTCGACTTGCCAC 59.620 50.000 0.00 0.00 0.00 5.01 R
2414 4302 2.815647 GCCTCAGCCTTCGAACGG 60.816 66.667 0.00 1.23 0.00 4.44 R
2476 4364 2.530460 TCCAGAACCCCCATCATTTG 57.470 50.000 0.00 0.00 0.00 2.32 R
2723 4617 1.957177 TCTAGGCGGTCTGCTTCATAG 59.043 52.381 3.10 2.17 45.43 2.23 R
3561 5835 4.020218 TCCACCTCTTGTCTGAAGGTATTG 60.020 45.833 0.00 0.00 0.00 1.90 R
3654 5971 6.745907 TCAATAATACAGTAGATATCGCGTGC 59.254 38.462 5.77 0.00 0.00 5.34 R
5509 10307 3.788227 TTCACCATTCACCAGTAAGCT 57.212 42.857 0.00 0.00 0.00 3.74 R
6268 11360 0.457035 ATGCCATGACACATTTCGGC 59.543 50.000 0.00 0.00 40.02 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.033894 GACCCGATTCGGCTGATG 57.966 61.111 19.80 8.09 46.86 3.07
18 19 1.441729 GACCCGATTCGGCTGATGA 59.558 57.895 19.80 0.00 46.86 2.92
19 20 0.598680 GACCCGATTCGGCTGATGAG 60.599 60.000 19.80 6.65 46.86 2.90
20 21 1.958205 CCCGATTCGGCTGATGAGC 60.958 63.158 19.80 0.00 46.86 4.26
35 36 6.986118 GCTGATGAGCAATAAATTCAACAAC 58.014 36.000 0.00 0.00 45.46 3.32
36 37 6.587226 GCTGATGAGCAATAAATTCAACAACA 59.413 34.615 0.00 0.00 45.46 3.33
37 38 7.116662 GCTGATGAGCAATAAATTCAACAACAA 59.883 33.333 0.00 0.00 45.46 2.83
38 39 8.883954 TGATGAGCAATAAATTCAACAACAAA 57.116 26.923 0.00 0.00 0.00 2.83
39 40 9.322773 TGATGAGCAATAAATTCAACAACAAAA 57.677 25.926 0.00 0.00 0.00 2.44
84 85 9.877137 GAATTTTTGTGGTTTTATTGTTGATCC 57.123 29.630 0.00 0.00 0.00 3.36
85 86 7.470289 TTTTTGTGGTTTTATTGTTGATCCG 57.530 32.000 0.00 0.00 0.00 4.18
86 87 5.776173 TTGTGGTTTTATTGTTGATCCGT 57.224 34.783 0.00 0.00 0.00 4.69
87 88 6.879276 TTGTGGTTTTATTGTTGATCCGTA 57.121 33.333 0.00 0.00 0.00 4.02
88 89 6.243811 TGTGGTTTTATTGTTGATCCGTAC 57.756 37.500 0.00 0.00 0.00 3.67
89 90 5.763698 TGTGGTTTTATTGTTGATCCGTACA 59.236 36.000 0.00 0.00 0.00 2.90
90 91 6.431543 TGTGGTTTTATTGTTGATCCGTACAT 59.568 34.615 0.00 0.00 0.00 2.29
91 92 7.606839 TGTGGTTTTATTGTTGATCCGTACATA 59.393 33.333 0.00 0.00 0.00 2.29
92 93 8.120465 GTGGTTTTATTGTTGATCCGTACATAG 58.880 37.037 0.00 0.00 0.00 2.23
93 94 7.130269 GGTTTTATTGTTGATCCGTACATAGC 58.870 38.462 0.00 0.00 0.00 2.97
94 95 7.201661 GGTTTTATTGTTGATCCGTACATAGCA 60.202 37.037 0.00 0.00 0.00 3.49
95 96 8.342634 GTTTTATTGTTGATCCGTACATAGCAT 58.657 33.333 0.00 0.00 0.00 3.79
96 97 8.445275 TTTATTGTTGATCCGTACATAGCATT 57.555 30.769 0.00 0.00 0.00 3.56
97 98 6.942532 ATTGTTGATCCGTACATAGCATTT 57.057 33.333 0.00 0.00 0.00 2.32
98 99 5.984233 TGTTGATCCGTACATAGCATTTC 57.016 39.130 0.00 0.00 0.00 2.17
99 100 5.423886 TGTTGATCCGTACATAGCATTTCA 58.576 37.500 0.00 0.00 0.00 2.69
100 101 6.054941 TGTTGATCCGTACATAGCATTTCAT 58.945 36.000 0.00 0.00 0.00 2.57
101 102 6.018016 TGTTGATCCGTACATAGCATTTCATG 60.018 38.462 0.00 0.00 0.00 3.07
102 103 5.852827 TGATCCGTACATAGCATTTCATGA 58.147 37.500 0.00 0.00 0.00 3.07
103 104 6.466812 TGATCCGTACATAGCATTTCATGAT 58.533 36.000 0.00 0.00 0.00 2.45
104 105 6.936335 TGATCCGTACATAGCATTTCATGATT 59.064 34.615 0.00 0.00 0.00 2.57
105 106 6.544038 TCCGTACATAGCATTTCATGATTG 57.456 37.500 0.00 0.00 0.00 2.67
106 107 5.469760 TCCGTACATAGCATTTCATGATTGG 59.530 40.000 0.00 0.00 0.00 3.16
107 108 5.335113 CCGTACATAGCATTTCATGATTGGG 60.335 44.000 0.00 0.00 0.00 4.12
108 109 4.595762 ACATAGCATTTCATGATTGGGC 57.404 40.909 0.00 0.00 0.00 5.36
109 110 4.220724 ACATAGCATTTCATGATTGGGCT 58.779 39.130 13.76 13.76 0.00 5.19
110 111 5.387788 ACATAGCATTTCATGATTGGGCTA 58.612 37.500 16.29 16.29 36.87 3.93
111 112 5.242393 ACATAGCATTTCATGATTGGGCTAC 59.758 40.000 16.29 0.00 35.48 3.58
112 113 3.907221 AGCATTTCATGATTGGGCTACT 58.093 40.909 0.00 0.00 0.00 2.57
113 114 4.284178 AGCATTTCATGATTGGGCTACTT 58.716 39.130 0.00 0.00 0.00 2.24
114 115 4.340381 AGCATTTCATGATTGGGCTACTTC 59.660 41.667 0.00 0.00 0.00 3.01
115 116 4.098349 GCATTTCATGATTGGGCTACTTCA 59.902 41.667 0.00 0.00 0.00 3.02
116 117 5.221382 GCATTTCATGATTGGGCTACTTCAT 60.221 40.000 0.00 0.00 0.00 2.57
117 118 6.444633 CATTTCATGATTGGGCTACTTCATC 58.555 40.000 0.00 0.00 0.00 2.92
118 119 4.090761 TCATGATTGGGCTACTTCATCC 57.909 45.455 0.00 0.00 0.00 3.51
119 120 3.459227 TCATGATTGGGCTACTTCATCCA 59.541 43.478 0.00 0.00 0.00 3.41
120 121 3.281727 TGATTGGGCTACTTCATCCAC 57.718 47.619 0.00 0.00 0.00 4.02
121 122 2.213499 GATTGGGCTACTTCATCCACG 58.787 52.381 0.00 0.00 0.00 4.94
122 123 1.271856 TTGGGCTACTTCATCCACGA 58.728 50.000 0.00 0.00 0.00 4.35
123 124 0.824109 TGGGCTACTTCATCCACGAG 59.176 55.000 0.00 0.00 0.00 4.18
124 125 1.112113 GGGCTACTTCATCCACGAGA 58.888 55.000 0.00 0.00 0.00 4.04
125 126 1.067821 GGGCTACTTCATCCACGAGAG 59.932 57.143 0.00 0.00 0.00 3.20
126 127 1.067821 GGCTACTTCATCCACGAGAGG 59.932 57.143 0.00 0.00 0.00 3.69
127 128 2.025155 GCTACTTCATCCACGAGAGGA 58.975 52.381 0.00 0.00 43.01 3.71
128 129 2.427453 GCTACTTCATCCACGAGAGGAA 59.573 50.000 7.01 7.01 42.75 3.36
129 130 3.119101 GCTACTTCATCCACGAGAGGAAA 60.119 47.826 8.23 0.00 44.19 3.13
130 131 4.620803 GCTACTTCATCCACGAGAGGAAAA 60.621 45.833 8.23 3.07 44.19 2.29
131 132 4.351874 ACTTCATCCACGAGAGGAAAAA 57.648 40.909 8.23 2.81 44.19 1.94
132 133 4.911390 ACTTCATCCACGAGAGGAAAAAT 58.089 39.130 8.23 0.00 44.19 1.82
133 134 6.049955 ACTTCATCCACGAGAGGAAAAATA 57.950 37.500 8.23 0.00 44.19 1.40
134 135 6.653989 ACTTCATCCACGAGAGGAAAAATAT 58.346 36.000 8.23 0.00 44.19 1.28
135 136 6.763610 ACTTCATCCACGAGAGGAAAAATATC 59.236 38.462 8.23 0.00 44.19 1.63
136 137 6.485830 TCATCCACGAGAGGAAAAATATCT 57.514 37.500 0.00 0.00 41.92 1.98
137 138 7.597288 TCATCCACGAGAGGAAAAATATCTA 57.403 36.000 0.00 0.00 41.92 1.98
138 139 7.661968 TCATCCACGAGAGGAAAAATATCTAG 58.338 38.462 0.00 0.00 41.92 2.43
139 140 7.287927 TCATCCACGAGAGGAAAAATATCTAGT 59.712 37.037 0.00 0.00 41.92 2.57
140 141 6.806751 TCCACGAGAGGAAAAATATCTAGTG 58.193 40.000 7.45 7.45 42.69 2.74
141 142 5.463724 CCACGAGAGGAAAAATATCTAGTGC 59.536 44.000 8.57 0.00 42.11 4.40
142 143 6.276847 CACGAGAGGAAAAATATCTAGTGCT 58.723 40.000 0.00 0.00 38.98 4.40
143 144 7.426410 CACGAGAGGAAAAATATCTAGTGCTA 58.574 38.462 0.00 0.00 38.98 3.49
144 145 7.380065 CACGAGAGGAAAAATATCTAGTGCTAC 59.620 40.741 0.00 0.00 38.98 3.58
145 146 6.864165 CGAGAGGAAAAATATCTAGTGCTACC 59.136 42.308 0.00 0.00 0.00 3.18
146 147 7.470147 CGAGAGGAAAAATATCTAGTGCTACCA 60.470 40.741 0.00 0.00 0.00 3.25
147 148 8.090788 AGAGGAAAAATATCTAGTGCTACCAA 57.909 34.615 0.00 0.00 0.00 3.67
148 149 8.548877 AGAGGAAAAATATCTAGTGCTACCAAA 58.451 33.333 0.00 0.00 0.00 3.28
149 150 8.507524 AGGAAAAATATCTAGTGCTACCAAAC 57.492 34.615 0.00 0.00 0.00 2.93
150 151 8.329502 AGGAAAAATATCTAGTGCTACCAAACT 58.670 33.333 0.00 0.00 0.00 2.66
151 152 8.957466 GGAAAAATATCTAGTGCTACCAAACTT 58.043 33.333 0.00 0.00 0.00 2.66
152 153 9.774742 GAAAAATATCTAGTGCTACCAAACTTG 57.225 33.333 0.00 0.00 0.00 3.16
153 154 9.515226 AAAAATATCTAGTGCTACCAAACTTGA 57.485 29.630 0.00 0.00 33.72 3.02
154 155 8.723942 AAATATCTAGTGCTACCAAACTTGAG 57.276 34.615 0.00 0.00 32.93 3.02
155 156 4.537135 TCTAGTGCTACCAAACTTGAGG 57.463 45.455 0.00 0.00 0.00 3.86
156 157 3.901844 TCTAGTGCTACCAAACTTGAGGT 59.098 43.478 0.00 0.00 41.89 3.85
157 158 5.081728 TCTAGTGCTACCAAACTTGAGGTA 58.918 41.667 0.00 0.00 39.31 3.08
158 159 4.004196 AGTGCTACCAAACTTGAGGTAC 57.996 45.455 0.00 0.00 39.31 3.34
160 161 4.836736 AGTGCTACCAAACTTGAGGTACTA 59.163 41.667 0.00 0.00 41.55 1.82
161 162 4.928020 GTGCTACCAAACTTGAGGTACTAC 59.072 45.833 0.00 0.00 41.55 2.73
162 163 4.020839 TGCTACCAAACTTGAGGTACTACC 60.021 45.833 0.00 0.00 41.55 3.18
163 164 4.020839 GCTACCAAACTTGAGGTACTACCA 60.021 45.833 8.01 0.00 41.55 3.25
164 165 5.338137 GCTACCAAACTTGAGGTACTACCAT 60.338 44.000 8.01 0.00 41.55 3.55
165 166 4.906618 ACCAAACTTGAGGTACTACCATG 58.093 43.478 8.01 0.00 41.55 3.66
166 167 4.595781 ACCAAACTTGAGGTACTACCATGA 59.404 41.667 8.01 0.00 41.55 3.07
167 168 5.250774 ACCAAACTTGAGGTACTACCATGAT 59.749 40.000 8.01 0.00 41.55 2.45
168 169 6.442564 ACCAAACTTGAGGTACTACCATGATA 59.557 38.462 8.01 0.00 41.55 2.15
169 170 6.761714 CCAAACTTGAGGTACTACCATGATAC 59.238 42.308 8.01 0.00 41.55 2.24
170 171 7.327975 CAAACTTGAGGTACTACCATGATACA 58.672 38.462 8.01 0.00 41.55 2.29
171 172 7.490657 AACTTGAGGTACTACCATGATACAA 57.509 36.000 8.01 3.84 41.55 2.41
172 173 7.113658 ACTTGAGGTACTACCATGATACAAG 57.886 40.000 8.01 12.91 41.55 3.16
173 174 5.531122 TGAGGTACTACCATGATACAAGC 57.469 43.478 8.01 0.00 41.55 4.01
174 175 5.208890 TGAGGTACTACCATGATACAAGCT 58.791 41.667 8.01 0.00 41.55 3.74
175 176 5.661312 TGAGGTACTACCATGATACAAGCTT 59.339 40.000 8.01 0.00 41.55 3.74
176 177 6.163135 AGGTACTACCATGATACAAGCTTC 57.837 41.667 8.01 0.00 41.95 3.86
177 178 5.900123 AGGTACTACCATGATACAAGCTTCT 59.100 40.000 8.01 0.00 41.95 2.85
178 179 7.067421 AGGTACTACCATGATACAAGCTTCTA 58.933 38.462 8.01 0.00 41.95 2.10
179 180 7.231722 AGGTACTACCATGATACAAGCTTCTAG 59.768 40.741 8.01 0.00 41.95 2.43
180 181 6.412362 ACTACCATGATACAAGCTTCTAGG 57.588 41.667 0.00 0.00 0.00 3.02
181 182 4.078639 ACCATGATACAAGCTTCTAGGC 57.921 45.455 0.00 0.00 0.00 3.93
182 183 3.181450 ACCATGATACAAGCTTCTAGGCC 60.181 47.826 0.00 0.00 0.00 5.19
183 184 2.890808 TGATACAAGCTTCTAGGCCG 57.109 50.000 0.00 0.00 0.00 6.13
184 185 2.108168 TGATACAAGCTTCTAGGCCGT 58.892 47.619 0.00 0.00 0.00 5.68
185 186 2.500098 TGATACAAGCTTCTAGGCCGTT 59.500 45.455 0.00 0.00 0.00 4.44
186 187 2.380084 TACAAGCTTCTAGGCCGTTG 57.620 50.000 0.00 0.00 0.00 4.10
187 188 0.321653 ACAAGCTTCTAGGCCGTTGG 60.322 55.000 0.00 0.00 0.00 3.77
188 189 0.036388 CAAGCTTCTAGGCCGTTGGA 60.036 55.000 0.00 0.00 0.00 3.53
189 190 0.912486 AAGCTTCTAGGCCGTTGGAT 59.088 50.000 0.00 0.00 0.00 3.41
190 191 0.912486 AGCTTCTAGGCCGTTGGATT 59.088 50.000 0.00 0.00 0.00 3.01
191 192 1.134371 AGCTTCTAGGCCGTTGGATTC 60.134 52.381 0.00 0.00 0.00 2.52
192 193 1.134371 GCTTCTAGGCCGTTGGATTCT 60.134 52.381 0.00 0.00 0.00 2.40
193 194 2.827652 CTTCTAGGCCGTTGGATTCTC 58.172 52.381 0.00 0.00 0.00 2.87
194 195 0.744874 TCTAGGCCGTTGGATTCTCG 59.255 55.000 0.00 0.00 0.00 4.04
195 196 0.249489 CTAGGCCGTTGGATTCTCGG 60.249 60.000 0.00 4.26 45.94 4.63
196 197 0.685131 TAGGCCGTTGGATTCTCGGA 60.685 55.000 11.36 0.00 46.05 4.55
197 198 1.146263 GGCCGTTGGATTCTCGGAT 59.854 57.895 11.36 0.00 46.05 4.18
198 199 0.880718 GGCCGTTGGATTCTCGGATC 60.881 60.000 11.36 0.00 46.05 3.36
199 200 1.215655 GCCGTTGGATTCTCGGATCG 61.216 60.000 11.36 0.00 46.05 3.69
200 201 0.597637 CCGTTGGATTCTCGGATCGG 60.598 60.000 2.73 0.00 46.05 4.18
201 202 0.384309 CGTTGGATTCTCGGATCGGA 59.616 55.000 2.69 2.69 0.00 4.55
202 203 1.854227 GTTGGATTCTCGGATCGGAC 58.146 55.000 0.00 0.00 0.00 4.79
203 204 0.384309 TTGGATTCTCGGATCGGACG 59.616 55.000 0.00 0.00 0.00 4.79
204 205 1.286260 GGATTCTCGGATCGGACGG 59.714 63.158 0.00 0.00 0.00 4.79
205 206 1.371881 GATTCTCGGATCGGACGGC 60.372 63.158 0.00 0.00 0.00 5.68
206 207 1.797211 GATTCTCGGATCGGACGGCT 61.797 60.000 0.00 0.00 0.00 5.52
207 208 1.392710 ATTCTCGGATCGGACGGCTT 61.393 55.000 0.00 0.00 0.00 4.35
208 209 0.749091 TTCTCGGATCGGACGGCTTA 60.749 55.000 0.00 0.00 0.00 3.09
209 210 0.536687 TCTCGGATCGGACGGCTTAT 60.537 55.000 0.00 0.00 0.00 1.73
210 211 1.162698 CTCGGATCGGACGGCTTATA 58.837 55.000 0.00 0.00 0.00 0.98
211 212 1.130749 CTCGGATCGGACGGCTTATAG 59.869 57.143 0.00 0.00 0.00 1.31
212 213 1.162698 CGGATCGGACGGCTTATAGA 58.837 55.000 0.00 0.00 0.00 1.98
213 214 1.130749 CGGATCGGACGGCTTATAGAG 59.869 57.143 0.00 0.00 0.00 2.43
214 215 2.434428 GGATCGGACGGCTTATAGAGA 58.566 52.381 0.00 0.00 0.00 3.10
215 216 3.018149 GGATCGGACGGCTTATAGAGAT 58.982 50.000 0.00 0.00 0.00 2.75
216 217 3.444388 GGATCGGACGGCTTATAGAGATT 59.556 47.826 0.00 0.00 0.00 2.40
217 218 4.439016 GGATCGGACGGCTTATAGAGATTC 60.439 50.000 0.00 0.00 0.00 2.52
218 219 3.752665 TCGGACGGCTTATAGAGATTCT 58.247 45.455 0.00 0.00 0.00 2.40
219 220 3.502595 TCGGACGGCTTATAGAGATTCTG 59.497 47.826 0.00 0.00 0.00 3.02
220 221 3.580731 GGACGGCTTATAGAGATTCTGC 58.419 50.000 0.00 0.00 0.00 4.26
221 222 3.005897 GGACGGCTTATAGAGATTCTGCA 59.994 47.826 0.00 0.00 0.00 4.41
222 223 4.501571 GGACGGCTTATAGAGATTCTGCAA 60.502 45.833 0.00 0.00 0.00 4.08
223 224 4.372656 ACGGCTTATAGAGATTCTGCAAC 58.627 43.478 0.00 0.00 0.00 4.17
224 225 4.141937 ACGGCTTATAGAGATTCTGCAACA 60.142 41.667 0.00 0.00 0.00 3.33
225 226 4.993584 CGGCTTATAGAGATTCTGCAACAT 59.006 41.667 0.00 0.00 0.00 2.71
226 227 5.468072 CGGCTTATAGAGATTCTGCAACATT 59.532 40.000 0.00 0.00 0.00 2.71
227 228 6.017605 CGGCTTATAGAGATTCTGCAACATTT 60.018 38.462 0.00 0.00 0.00 2.32
228 229 7.137426 GGCTTATAGAGATTCTGCAACATTTG 58.863 38.462 0.00 0.00 0.00 2.32
261 262 8.762481 ACCTCCTAAAAGTTTAGAAATTGTGT 57.238 30.769 11.57 0.00 42.05 3.72
262 263 9.856162 ACCTCCTAAAAGTTTAGAAATTGTGTA 57.144 29.630 11.57 0.00 42.05 2.90
272 273 9.331282 AGTTTAGAAATTGTGTATAGATCCAGC 57.669 33.333 0.00 0.00 0.00 4.85
273 274 9.109393 GTTTAGAAATTGTGTATAGATCCAGCA 57.891 33.333 0.00 0.00 0.00 4.41
274 275 8.893219 TTAGAAATTGTGTATAGATCCAGCAG 57.107 34.615 0.00 0.00 0.00 4.24
275 276 7.129457 AGAAATTGTGTATAGATCCAGCAGA 57.871 36.000 0.00 0.00 0.00 4.26
276 277 7.743749 AGAAATTGTGTATAGATCCAGCAGAT 58.256 34.615 0.00 0.00 38.17 2.90
284 285 1.673168 GATCCAGCAGATCCAACCAC 58.327 55.000 5.64 0.00 45.00 4.16
285 286 1.211457 GATCCAGCAGATCCAACCACT 59.789 52.381 5.64 0.00 45.00 4.00
286 287 0.615331 TCCAGCAGATCCAACCACTC 59.385 55.000 0.00 0.00 0.00 3.51
287 288 0.393537 CCAGCAGATCCAACCACTCC 60.394 60.000 0.00 0.00 0.00 3.85
288 289 0.617413 CAGCAGATCCAACCACTCCT 59.383 55.000 0.00 0.00 0.00 3.69
289 290 1.833630 CAGCAGATCCAACCACTCCTA 59.166 52.381 0.00 0.00 0.00 2.94
290 291 2.114616 AGCAGATCCAACCACTCCTAG 58.885 52.381 0.00 0.00 0.00 3.02
291 292 2.111384 GCAGATCCAACCACTCCTAGA 58.889 52.381 0.00 0.00 0.00 2.43
292 293 2.703007 GCAGATCCAACCACTCCTAGAT 59.297 50.000 0.00 0.00 0.00 1.98
293 294 3.494048 GCAGATCCAACCACTCCTAGATG 60.494 52.174 0.00 0.00 0.00 2.90
294 295 2.703007 AGATCCAACCACTCCTAGATGC 59.297 50.000 0.00 0.00 0.00 3.91
295 296 1.204146 TCCAACCACTCCTAGATGCC 58.796 55.000 0.00 0.00 0.00 4.40
296 297 0.179073 CCAACCACTCCTAGATGCCG 60.179 60.000 0.00 0.00 0.00 5.69
297 298 0.537188 CAACCACTCCTAGATGCCGT 59.463 55.000 0.00 0.00 0.00 5.68
298 299 0.824759 AACCACTCCTAGATGCCGTC 59.175 55.000 0.00 0.00 0.00 4.79
299 300 1.043673 ACCACTCCTAGATGCCGTCC 61.044 60.000 0.00 0.00 0.00 4.79
300 301 1.043116 CCACTCCTAGATGCCGTCCA 61.043 60.000 0.00 0.00 0.00 4.02
301 302 1.043816 CACTCCTAGATGCCGTCCAT 58.956 55.000 0.00 0.00 36.70 3.41
309 310 2.540265 GATGCCGTCCATCTGAGAAT 57.460 50.000 6.16 0.00 45.58 2.40
310 311 2.411904 GATGCCGTCCATCTGAGAATC 58.588 52.381 6.16 0.00 45.58 2.52
311 312 0.465705 TGCCGTCCATCTGAGAATCC 59.534 55.000 0.00 0.00 0.00 3.01
312 313 0.598680 GCCGTCCATCTGAGAATCCG 60.599 60.000 0.00 0.00 0.00 4.18
313 314 1.032794 CCGTCCATCTGAGAATCCGA 58.967 55.000 0.00 0.00 31.35 4.55
314 315 1.269309 CCGTCCATCTGAGAATCCGAC 60.269 57.143 0.00 0.00 28.86 4.79
315 316 1.598183 CGTCCATCTGAGAATCCGACG 60.598 57.143 8.73 8.73 28.86 5.12
316 317 1.032794 TCCATCTGAGAATCCGACGG 58.967 55.000 7.84 7.84 32.72 4.79
317 318 0.598680 CCATCTGAGAATCCGACGGC 60.599 60.000 9.66 0.00 28.86 5.68
318 319 0.387202 CATCTGAGAATCCGACGGCT 59.613 55.000 9.66 0.00 28.86 5.52
319 320 0.671251 ATCTGAGAATCCGACGGCTC 59.329 55.000 9.66 10.93 28.86 4.70
320 321 0.679960 TCTGAGAATCCGACGGCTCA 60.680 55.000 18.05 18.05 36.13 4.26
321 322 0.248825 CTGAGAATCCGACGGCTCAG 60.249 60.000 25.66 25.66 45.59 3.35
322 323 0.679960 TGAGAATCCGACGGCTCAGA 60.680 55.000 15.97 0.00 32.85 3.27
323 324 0.456221 GAGAATCCGACGGCTCAGAA 59.544 55.000 9.66 0.00 0.00 3.02
324 325 0.457851 AGAATCCGACGGCTCAGAAG 59.542 55.000 9.66 0.00 0.00 2.85
325 326 0.173708 GAATCCGACGGCTCAGAAGT 59.826 55.000 9.66 0.00 0.00 3.01
326 327 0.173708 AATCCGACGGCTCAGAAGTC 59.826 55.000 9.66 0.00 0.00 3.01
327 328 1.668101 ATCCGACGGCTCAGAAGTCC 61.668 60.000 9.66 0.00 0.00 3.85
328 329 2.202492 CGACGGCTCAGAAGTCCG 60.202 66.667 0.00 0.00 43.45 4.79
330 331 4.410225 ACGGCTCAGAAGTCCGTA 57.590 55.556 3.53 0.00 46.46 4.02
331 332 2.883572 ACGGCTCAGAAGTCCGTAT 58.116 52.632 3.53 0.00 46.46 3.06
332 333 0.739561 ACGGCTCAGAAGTCCGTATC 59.260 55.000 3.53 0.00 46.46 2.24
333 334 0.738975 CGGCTCAGAAGTCCGTATCA 59.261 55.000 0.00 0.00 37.39 2.15
334 335 1.534175 CGGCTCAGAAGTCCGTATCAC 60.534 57.143 0.00 0.00 37.39 3.06
335 336 1.534175 GGCTCAGAAGTCCGTATCACG 60.534 57.143 0.00 0.00 42.11 4.35
348 349 3.822996 CGTATCACGGTAGCATCTAAGG 58.177 50.000 0.00 0.00 38.08 2.69
349 350 2.821991 ATCACGGTAGCATCTAAGGC 57.178 50.000 0.00 0.00 0.00 4.35
350 351 1.776662 TCACGGTAGCATCTAAGGCT 58.223 50.000 0.00 0.00 45.18 4.58
351 352 2.108168 TCACGGTAGCATCTAAGGCTT 58.892 47.619 4.58 4.58 42.62 4.35
352 353 2.159099 TCACGGTAGCATCTAAGGCTTG 60.159 50.000 10.69 0.00 42.62 4.01
353 354 1.139058 ACGGTAGCATCTAAGGCTTGG 59.861 52.381 10.69 7.23 42.62 3.61
354 355 1.598882 GGTAGCATCTAAGGCTTGGC 58.401 55.000 10.69 8.35 42.62 4.52
355 356 1.134098 GGTAGCATCTAAGGCTTGGCA 60.134 52.381 10.69 0.00 42.62 4.92
356 357 2.216898 GTAGCATCTAAGGCTTGGCAG 58.783 52.381 10.69 3.93 42.62 4.85
357 358 0.106819 AGCATCTAAGGCTTGGCAGG 60.107 55.000 10.69 0.95 38.81 4.85
358 359 0.107017 GCATCTAAGGCTTGGCAGGA 60.107 55.000 10.69 0.95 0.00 3.86
359 360 1.964552 CATCTAAGGCTTGGCAGGAG 58.035 55.000 10.69 0.00 0.00 3.69
360 361 0.182299 ATCTAAGGCTTGGCAGGAGC 59.818 55.000 10.69 0.84 39.41 4.70
361 362 1.200760 TCTAAGGCTTGGCAGGAGCA 61.201 55.000 10.69 0.00 44.61 4.26
362 363 0.747283 CTAAGGCTTGGCAGGAGCAG 60.747 60.000 10.69 0.00 44.61 4.24
363 364 1.200760 TAAGGCTTGGCAGGAGCAGA 61.201 55.000 10.69 0.00 44.61 4.26
364 365 1.860944 AAGGCTTGGCAGGAGCAGAT 61.861 55.000 12.83 0.00 44.61 2.90
365 366 0.984961 AGGCTTGGCAGGAGCAGATA 60.985 55.000 12.83 0.00 44.61 1.98
366 367 0.110104 GGCTTGGCAGGAGCAGATAT 59.890 55.000 12.83 0.00 44.61 1.63
367 368 1.478288 GGCTTGGCAGGAGCAGATATT 60.478 52.381 12.83 0.00 44.61 1.28
368 369 1.878734 GCTTGGCAGGAGCAGATATTC 59.121 52.381 6.30 0.00 44.61 1.75
369 370 2.486907 GCTTGGCAGGAGCAGATATTCT 60.487 50.000 6.30 0.00 44.61 2.40
370 371 3.401182 CTTGGCAGGAGCAGATATTCTC 58.599 50.000 0.00 0.00 44.61 2.87
375 376 2.734276 GGAGCAGATATTCTCCCGTC 57.266 55.000 0.00 0.00 42.30 4.79
376 377 1.273886 GGAGCAGATATTCTCCCGTCC 59.726 57.143 0.00 0.00 42.30 4.79
377 378 1.964223 GAGCAGATATTCTCCCGTCCA 59.036 52.381 0.00 0.00 0.00 4.02
378 379 1.689273 AGCAGATATTCTCCCGTCCAC 59.311 52.381 0.00 0.00 0.00 4.02
379 380 1.603172 GCAGATATTCTCCCGTCCACG 60.603 57.143 0.00 0.00 39.44 4.94
380 381 1.954382 CAGATATTCTCCCGTCCACGA 59.046 52.381 0.00 0.00 43.02 4.35
381 382 2.030717 CAGATATTCTCCCGTCCACGAG 60.031 54.545 0.00 0.00 43.02 4.18
382 383 2.158652 AGATATTCTCCCGTCCACGAGA 60.159 50.000 0.00 0.00 43.02 4.04
383 384 2.359981 TATTCTCCCGTCCACGAGAT 57.640 50.000 0.00 0.00 43.02 2.75
384 385 1.033574 ATTCTCCCGTCCACGAGATC 58.966 55.000 0.00 0.00 43.02 2.75
385 386 1.035932 TTCTCCCGTCCACGAGATCC 61.036 60.000 0.00 0.00 43.02 3.36
386 387 1.753078 CTCCCGTCCACGAGATCCA 60.753 63.158 0.00 0.00 43.02 3.41
387 388 1.076265 TCCCGTCCACGAGATCCAT 60.076 57.895 0.00 0.00 43.02 3.41
388 389 1.068083 CCCGTCCACGAGATCCATG 59.932 63.158 0.00 0.00 43.02 3.66
389 390 1.391933 CCCGTCCACGAGATCCATGA 61.392 60.000 0.00 0.00 43.02 3.07
390 391 0.459899 CCGTCCACGAGATCCATGAA 59.540 55.000 0.00 0.00 43.02 2.57
391 392 1.134818 CCGTCCACGAGATCCATGAAA 60.135 52.381 0.00 0.00 43.02 2.69
392 393 2.616960 CGTCCACGAGATCCATGAAAA 58.383 47.619 0.00 0.00 43.02 2.29
393 394 2.348666 CGTCCACGAGATCCATGAAAAC 59.651 50.000 0.00 0.00 43.02 2.43
394 395 3.600388 GTCCACGAGATCCATGAAAACT 58.400 45.455 0.00 0.00 0.00 2.66
395 396 3.619038 GTCCACGAGATCCATGAAAACTC 59.381 47.826 0.00 0.00 0.00 3.01
396 397 3.260632 TCCACGAGATCCATGAAAACTCA 59.739 43.478 0.00 0.00 0.00 3.41
397 398 4.002982 CCACGAGATCCATGAAAACTCAA 58.997 43.478 0.00 0.00 0.00 3.02
398 399 4.637534 CCACGAGATCCATGAAAACTCAAT 59.362 41.667 0.00 0.00 0.00 2.57
399 400 5.220739 CCACGAGATCCATGAAAACTCAATC 60.221 44.000 0.00 0.00 0.00 2.67
400 401 5.352293 CACGAGATCCATGAAAACTCAATCA 59.648 40.000 0.00 0.00 0.00 2.57
401 402 5.939883 ACGAGATCCATGAAAACTCAATCAA 59.060 36.000 0.00 0.00 0.00 2.57
402 403 6.093219 ACGAGATCCATGAAAACTCAATCAAG 59.907 38.462 0.00 0.00 0.00 3.02
403 404 6.314648 CGAGATCCATGAAAACTCAATCAAGA 59.685 38.462 0.00 0.00 0.00 3.02
404 405 7.148356 CGAGATCCATGAAAACTCAATCAAGAA 60.148 37.037 0.00 0.00 0.00 2.52
405 406 8.413309 AGATCCATGAAAACTCAATCAAGAAA 57.587 30.769 0.00 0.00 0.00 2.52
406 407 8.521176 AGATCCATGAAAACTCAATCAAGAAAG 58.479 33.333 0.00 0.00 0.00 2.62
407 408 7.822161 TCCATGAAAACTCAATCAAGAAAGA 57.178 32.000 0.00 0.00 0.00 2.52
408 409 7.879070 TCCATGAAAACTCAATCAAGAAAGAG 58.121 34.615 0.00 0.00 0.00 2.85
409 410 7.720957 TCCATGAAAACTCAATCAAGAAAGAGA 59.279 33.333 0.00 0.00 32.59 3.10
410 411 8.355169 CCATGAAAACTCAATCAAGAAAGAGAA 58.645 33.333 0.00 0.00 32.59 2.87
411 412 9.740239 CATGAAAACTCAATCAAGAAAGAGAAA 57.260 29.630 8.51 0.00 32.59 2.52
412 413 9.741647 ATGAAAACTCAATCAAGAAAGAGAAAC 57.258 29.630 8.51 0.00 32.59 2.78
413 414 7.910162 TGAAAACTCAATCAAGAAAGAGAAACG 59.090 33.333 8.51 0.00 32.59 3.60
414 415 5.931441 ACTCAATCAAGAAAGAGAAACGG 57.069 39.130 8.51 0.00 32.59 4.44
415 416 5.611374 ACTCAATCAAGAAAGAGAAACGGA 58.389 37.500 8.51 0.00 32.59 4.69
416 417 5.467063 ACTCAATCAAGAAAGAGAAACGGAC 59.533 40.000 8.51 0.00 32.59 4.79
428 429 2.290641 AGAAACGGACTGCATTGTTCAC 59.709 45.455 0.00 0.00 0.00 3.18
431 432 0.238289 CGGACTGCATTGTTCACACC 59.762 55.000 0.00 0.00 0.00 4.16
436 437 2.489329 ACTGCATTGTTCACACCATAGC 59.511 45.455 0.00 0.00 0.00 2.97
441 442 0.249120 TGTTCACACCATAGCCGGAG 59.751 55.000 5.05 0.00 0.00 4.63
445 446 0.811616 CACACCATAGCCGGAGAAGC 60.812 60.000 5.05 0.00 0.00 3.86
449 450 0.179000 CCATAGCCGGAGAAGCAAGT 59.821 55.000 5.05 0.00 0.00 3.16
461 462 2.048127 GCAAGTTCTCTCGCCGGT 60.048 61.111 1.90 0.00 0.00 5.28
464 465 1.938016 GCAAGTTCTCTCGCCGGTTAA 60.938 52.381 1.90 0.00 0.00 2.01
525 526 2.291800 CCCATTCTTCCCATTCACCAGT 60.292 50.000 0.00 0.00 0.00 4.00
551 552 2.366590 TGAGCTTGAGTGAGAGCAAAGA 59.633 45.455 0.00 0.00 41.31 2.52
554 555 4.396522 AGCTTGAGTGAGAGCAAAGAAAT 58.603 39.130 0.00 0.00 41.31 2.17
555 556 4.215827 AGCTTGAGTGAGAGCAAAGAAATG 59.784 41.667 0.00 0.00 41.31 2.32
603 609 1.467035 CGCCAGAAGCTGATTTGAAGC 60.467 52.381 0.00 0.00 40.39 3.86
652 658 4.713553 GGAGGAGAGGAGAATTCCAATTC 58.286 47.826 0.65 4.14 46.64 2.17
664 670 0.175760 TCCAATTCGAGCTTCCCGAG 59.824 55.000 0.00 0.00 37.35 4.63
673 687 2.815647 CTTCCCGAGCGGAACAGC 60.816 66.667 11.05 0.00 46.27 4.40
757 771 2.095008 CCATGATCCTCCGTACTGATCG 60.095 54.545 0.00 0.00 38.15 3.69
814 841 5.357257 TCCTCATCGCAAAAGAATACTACC 58.643 41.667 0.00 0.00 0.00 3.18
815 842 5.105106 TCCTCATCGCAAAAGAATACTACCA 60.105 40.000 0.00 0.00 0.00 3.25
816 843 5.006746 CCTCATCGCAAAAGAATACTACCAC 59.993 44.000 0.00 0.00 0.00 4.16
1277 1411 0.820871 CTGTACTGGTGAGGCTCCTC 59.179 60.000 12.86 8.95 43.01 3.71
1319 1478 3.256383 TGTTTGATGAAATGCTGACCAGG 59.744 43.478 0.00 0.00 0.00 4.45
1341 1504 4.399219 GGCTATTCATAGTCTTTTCCCCC 58.601 47.826 0.00 0.00 32.39 5.40
1484 3296 7.588497 TGATGCATGTAGTTAGTGTAGATCT 57.412 36.000 2.46 0.00 0.00 2.75
1533 3345 8.164058 GCTAAAGAGGCATATCAGATTCTTTT 57.836 34.615 10.84 0.01 36.56 2.27
1569 3381 4.960938 TCTACACACAATTGACTCTGCTT 58.039 39.130 13.59 0.00 0.00 3.91
1601 3416 6.822442 TGAACACATGTCTTACCAAACTCTA 58.178 36.000 0.00 0.00 0.00 2.43
1707 3522 4.499040 GCCGTTGAATTAATTGTTCATCCG 59.501 41.667 5.17 11.85 35.68 4.18
1851 3666 4.439700 CCTTTGTACGATGACGATGGTAGT 60.440 45.833 0.00 0.00 42.66 2.73
1863 3678 0.783850 ATGGTAGTTTGGTGGGCCTT 59.216 50.000 4.53 0.00 35.27 4.35
2002 3823 5.357032 AGTGGTTCAGTAAACAAAGGTTCTG 59.643 40.000 0.00 0.00 39.81 3.02
2030 3857 1.681166 CCAGCAACCTCCTCAATCTGG 60.681 57.143 0.00 0.00 34.44 3.86
2088 3942 4.815269 TCGCTGTTTAATTTCAAATGGGG 58.185 39.130 0.00 0.00 0.00 4.96
2185 4049 3.319972 ACCAGCGTTACAAGTAGAGTTCA 59.680 43.478 0.00 0.00 0.00 3.18
2291 4161 2.354259 GAGGTGGCATCAAGTGAAGAG 58.646 52.381 0.00 0.00 0.00 2.85
2347 4217 1.032114 GTGGCCCAAGAGAAATCCCG 61.032 60.000 0.00 0.00 0.00 5.14
2663 4551 3.834231 CCTGGTGGGATTTCAACAAGAAT 59.166 43.478 0.00 0.00 33.54 2.40
2736 4630 5.130350 AGAGAGTAGACTATGAAGCAGACC 58.870 45.833 0.00 0.00 0.00 3.85
2824 4723 4.934356 TCTCCCTTTGCAATTACTCCATT 58.066 39.130 0.00 0.00 0.00 3.16
2831 4730 6.152661 CCTTTGCAATTACTCCATTTGTAGGA 59.847 38.462 0.00 0.00 0.00 2.94
2864 4869 5.830912 TCTTGTTAACATGCACTCCAAAAG 58.169 37.500 9.56 0.00 0.00 2.27
3111 5135 5.392767 TCAGGAGTCATAACAGTTCAGTC 57.607 43.478 0.00 0.00 0.00 3.51
3330 5584 3.281727 TGCAATCTGGTATTGTCCTCC 57.718 47.619 0.00 0.00 0.00 4.30
3432 5696 3.135712 TGGTATGGCTCGGTATGTCATTT 59.864 43.478 0.00 0.00 0.00 2.32
3433 5697 3.746492 GGTATGGCTCGGTATGTCATTTC 59.254 47.826 0.00 0.00 0.00 2.17
3561 5835 8.393671 AGCAGGAATATTCAGAAGAAATGATC 57.606 34.615 17.07 0.00 37.29 2.92
3658 5975 3.976942 GCTATAATGGCAATGAAAGCACG 59.023 43.478 0.00 0.00 0.00 5.34
4552 8502 1.532868 AGCGAAGTTGAACTGCATGTC 59.467 47.619 3.89 0.00 0.00 3.06
4755 9049 2.094734 GCCGACATTGTTACCTAAACCG 59.905 50.000 0.00 0.00 37.27 4.44
5014 9338 7.260603 ACTTTATTCTCCATGCTTTATGTTGC 58.739 34.615 0.00 0.00 34.87 4.17
5024 9348 4.592942 TGCTTTATGTTGCCTCTTCTCAT 58.407 39.130 0.00 0.00 0.00 2.90
5069 9393 3.254470 TGGTCTTTCACGTCTGAAACA 57.746 42.857 0.00 0.00 40.76 2.83
5156 9480 1.916506 TGGACTCTCCAGACTGACAG 58.083 55.000 3.32 0.00 42.67 3.51
5270 9628 8.084684 ACCTTCAAATGAAAAGTAAGCTCAATC 58.915 33.333 0.00 0.00 33.07 2.67
5396 9757 1.484240 GTGGGAGCTTGCTACTCAGAT 59.516 52.381 4.72 0.00 35.79 2.90
5436 9797 4.206375 TCAATACAATGCAGGTACATGGG 58.794 43.478 9.91 0.00 0.00 4.00
5454 9815 6.357367 ACATGGGGATGACTTTTCTACATAC 58.643 40.000 0.00 0.00 0.00 2.39
5653 10468 4.109675 CCTAACGGTGGCCCCCTG 62.110 72.222 1.64 0.00 0.00 4.45
5739 10559 1.202734 CCTCAGTGGGCATCGATGATT 60.203 52.381 29.20 2.01 0.00 2.57
5768 10843 8.219660 AGCTGTTGGGAAAGGTATATATACAT 57.780 34.615 21.56 13.84 34.98 2.29
5769 10844 8.322091 AGCTGTTGGGAAAGGTATATATACATC 58.678 37.037 21.56 15.86 34.98 3.06
5802 10877 4.080863 CAGGCTAGTGAAGGAGTACCAAAT 60.081 45.833 0.00 0.00 38.94 2.32
5811 10886 6.152831 GTGAAGGAGTACCAAATAGCCAATTT 59.847 38.462 0.00 0.00 38.36 1.82
5830 10905 6.265577 CAATTTCCGATCCCACTAAATCAAC 58.734 40.000 0.00 0.00 0.00 3.18
5967 11043 1.542547 GGGAAAGGTGCTCGAAAGACA 60.543 52.381 0.00 0.00 35.39 3.41
5997 11073 9.728025 GTCAAAGATGATGGCTGAGGTAGCTTA 62.728 44.444 0.00 0.00 44.17 3.09
6045 11121 2.368548 GCCATCTTGGGGAACAGTTTTT 59.631 45.455 0.00 0.00 38.19 1.94
6126 11206 1.202976 ACCTTGATGCTTTGGAGTGCT 60.203 47.619 0.00 0.00 0.00 4.40
6132 11212 0.102844 TGCTTTGGAGTGCTGTTTGC 59.897 50.000 0.00 0.00 43.25 3.68
6182 11268 0.180406 ACTGCCAGTCGTTTCAAGGT 59.820 50.000 0.00 0.00 0.00 3.50
6268 11360 0.246635 AGCTAGTTGTGCCTGTACCG 59.753 55.000 0.00 0.00 0.00 4.02
6271 11363 2.495366 TAGTTGTGCCTGTACCGCCG 62.495 60.000 0.00 0.00 0.00 6.46
6302 11394 4.586421 TCATGGCATAAACAACACTTTCCA 59.414 37.500 0.00 0.00 0.00 3.53
6304 11396 3.701542 TGGCATAAACAACACTTTCCACA 59.298 39.130 0.00 0.00 0.00 4.17
6321 11413 1.811965 CACATCGGACATGGCTTTTCA 59.188 47.619 0.00 0.00 0.00 2.69
6322 11414 2.086869 ACATCGGACATGGCTTTTCAG 58.913 47.619 0.00 0.00 0.00 3.02
6325 11417 3.410631 TCGGACATGGCTTTTCAGTTA 57.589 42.857 0.00 0.00 0.00 2.24
6371 11465 9.977490 ATTTTACGTTTACTTTTTATTTTCGCG 57.023 25.926 0.00 0.00 0.00 5.87
6616 12070 7.653647 ACTTTATGAATTGGTTTTAAGCACGA 58.346 30.769 0.00 0.00 35.94 4.35
6681 12135 8.707938 TGCGTGATGGATATATCTTCTTAATG 57.292 34.615 12.42 1.85 0.00 1.90
6789 12252 9.941325 ATACACAATGAAATAATTTGGAAAGCA 57.059 25.926 0.00 0.00 0.00 3.91
6792 12255 8.723311 CACAATGAAATAATTTGGAAAGCATGT 58.277 29.630 0.00 0.00 0.00 3.21
6793 12256 8.938906 ACAATGAAATAATTTGGAAAGCATGTC 58.061 29.630 0.00 0.00 0.00 3.06
6873 12341 6.325028 TCACATGAACCTTTGGGAAAATACAA 59.675 34.615 0.00 0.00 36.25 2.41
6874 12342 6.646240 CACATGAACCTTTGGGAAAATACAAG 59.354 38.462 0.00 0.00 36.25 3.16
6946 12414 9.549078 TGGTTTTAATTTACAATGGACCTTTTC 57.451 29.630 0.00 0.00 0.00 2.29
6947 12415 9.549078 GGTTTTAATTTACAATGGACCTTTTCA 57.451 29.630 0.00 0.00 0.00 2.69
6954 12422 9.747898 ATTTACAATGGACCTTTTCATAGTACA 57.252 29.630 0.00 0.00 0.00 2.90
6955 12423 8.556213 TTACAATGGACCTTTTCATAGTACAC 57.444 34.615 0.00 0.00 0.00 2.90
6956 12424 5.642063 ACAATGGACCTTTTCATAGTACACG 59.358 40.000 0.00 0.00 0.00 4.49
6957 12425 5.670792 ATGGACCTTTTCATAGTACACGA 57.329 39.130 0.00 0.00 0.00 4.35
6958 12426 5.471556 TGGACCTTTTCATAGTACACGAA 57.528 39.130 0.00 0.00 0.00 3.85
6959 12427 5.856156 TGGACCTTTTCATAGTACACGAAA 58.144 37.500 0.00 0.00 0.00 3.46
6960 12428 6.289834 TGGACCTTTTCATAGTACACGAAAA 58.710 36.000 13.24 13.24 36.54 2.29
6961 12429 6.766944 TGGACCTTTTCATAGTACACGAAAAA 59.233 34.615 14.24 7.09 37.97 1.94
6962 12430 7.073883 GGACCTTTTCATAGTACACGAAAAAC 58.926 38.462 14.24 10.23 37.97 2.43
6963 12431 7.041576 GGACCTTTTCATAGTACACGAAAAACT 60.042 37.037 14.24 6.15 37.97 2.66
6964 12432 8.217131 ACCTTTTCATAGTACACGAAAAACTT 57.783 30.769 14.24 3.97 37.97 2.66
6965 12433 8.340443 ACCTTTTCATAGTACACGAAAAACTTC 58.660 33.333 14.24 0.00 37.97 3.01
6966 12434 8.557029 CCTTTTCATAGTACACGAAAAACTTCT 58.443 33.333 14.24 0.00 37.97 2.85
6967 12435 9.582223 CTTTTCATAGTACACGAAAAACTTCTC 57.418 33.333 14.24 0.00 37.97 2.87
6968 12436 8.651391 TTTCATAGTACACGAAAAACTTCTCA 57.349 30.769 0.00 0.00 0.00 3.27
6969 12437 8.651391 TTCATAGTACACGAAAAACTTCTCAA 57.349 30.769 0.00 0.00 0.00 3.02
6970 12438 8.827177 TCATAGTACACGAAAAACTTCTCAAT 57.173 30.769 0.00 0.00 0.00 2.57
6971 12439 9.917129 TCATAGTACACGAAAAACTTCTCAATA 57.083 29.630 0.00 0.00 0.00 1.90
6975 12443 9.367444 AGTACACGAAAAACTTCTCAATATAGG 57.633 33.333 0.00 0.00 0.00 2.57
6976 12444 9.362539 GTACACGAAAAACTTCTCAATATAGGA 57.637 33.333 0.00 0.00 0.00 2.94
6978 12446 8.883731 ACACGAAAAACTTCTCAATATAGGATG 58.116 33.333 0.00 0.00 0.00 3.51
6979 12447 9.098355 CACGAAAAACTTCTCAATATAGGATGA 57.902 33.333 0.00 0.00 0.00 2.92
6980 12448 9.667107 ACGAAAAACTTCTCAATATAGGATGAA 57.333 29.630 0.00 0.00 0.00 2.57
6981 12449 9.922305 CGAAAAACTTCTCAATATAGGATGAAC 57.078 33.333 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.224075 ATTGCTCATCAGCCGAATCG 58.776 50.000 0.00 0.00 46.26 3.34
5 6 4.818534 TTTATTGCTCATCAGCCGAATC 57.181 40.909 0.00 0.00 46.26 2.52
6 7 5.300034 TGAATTTATTGCTCATCAGCCGAAT 59.700 36.000 0.00 0.00 46.26 3.34
7 8 4.639755 TGAATTTATTGCTCATCAGCCGAA 59.360 37.500 0.00 0.00 46.26 4.30
8 9 4.198530 TGAATTTATTGCTCATCAGCCGA 58.801 39.130 0.00 0.00 46.26 5.54
9 10 4.556942 TGAATTTATTGCTCATCAGCCG 57.443 40.909 0.00 0.00 46.26 5.52
12 13 8.523523 TTGTTGTTGAATTTATTGCTCATCAG 57.476 30.769 0.00 0.00 0.00 2.90
13 14 8.883954 TTTGTTGTTGAATTTATTGCTCATCA 57.116 26.923 0.00 0.00 0.00 3.07
58 59 9.877137 GGATCAACAATAAAACCACAAAAATTC 57.123 29.630 0.00 0.00 0.00 2.17
59 60 8.555361 CGGATCAACAATAAAACCACAAAAATT 58.445 29.630 0.00 0.00 0.00 1.82
60 61 7.713073 ACGGATCAACAATAAAACCACAAAAAT 59.287 29.630 0.00 0.00 0.00 1.82
61 62 7.042335 ACGGATCAACAATAAAACCACAAAAA 58.958 30.769 0.00 0.00 0.00 1.94
62 63 6.574350 ACGGATCAACAATAAAACCACAAAA 58.426 32.000 0.00 0.00 0.00 2.44
63 64 6.150396 ACGGATCAACAATAAAACCACAAA 57.850 33.333 0.00 0.00 0.00 2.83
64 65 5.776173 ACGGATCAACAATAAAACCACAA 57.224 34.783 0.00 0.00 0.00 3.33
65 66 5.763698 TGTACGGATCAACAATAAAACCACA 59.236 36.000 0.00 0.00 0.00 4.17
66 67 6.243811 TGTACGGATCAACAATAAAACCAC 57.756 37.500 0.00 0.00 0.00 4.16
67 68 7.201661 GCTATGTACGGATCAACAATAAAACCA 60.202 37.037 0.00 0.00 0.00 3.67
68 69 7.130269 GCTATGTACGGATCAACAATAAAACC 58.870 38.462 0.00 0.00 0.00 3.27
69 70 7.690228 TGCTATGTACGGATCAACAATAAAAC 58.310 34.615 0.00 0.00 0.00 2.43
70 71 7.851387 TGCTATGTACGGATCAACAATAAAA 57.149 32.000 0.00 0.00 0.00 1.52
71 72 8.445275 AATGCTATGTACGGATCAACAATAAA 57.555 30.769 0.00 0.00 0.00 1.40
72 73 8.445275 AAATGCTATGTACGGATCAACAATAA 57.555 30.769 0.00 0.00 0.00 1.40
73 74 7.713073 TGAAATGCTATGTACGGATCAACAATA 59.287 33.333 0.00 0.00 0.00 1.90
74 75 6.542005 TGAAATGCTATGTACGGATCAACAAT 59.458 34.615 0.00 0.00 0.00 2.71
75 76 5.877564 TGAAATGCTATGTACGGATCAACAA 59.122 36.000 0.00 0.00 0.00 2.83
76 77 5.423886 TGAAATGCTATGTACGGATCAACA 58.576 37.500 0.00 0.00 0.00 3.33
77 78 5.984233 TGAAATGCTATGTACGGATCAAC 57.016 39.130 0.00 0.00 0.00 3.18
78 79 6.287525 TCATGAAATGCTATGTACGGATCAA 58.712 36.000 0.00 0.00 46.21 2.57
79 80 5.852827 TCATGAAATGCTATGTACGGATCA 58.147 37.500 0.00 0.00 46.21 2.92
80 81 6.974932 ATCATGAAATGCTATGTACGGATC 57.025 37.500 0.00 0.00 46.21 3.36
81 82 6.149973 CCAATCATGAAATGCTATGTACGGAT 59.850 38.462 0.00 0.00 46.21 4.18
82 83 5.469760 CCAATCATGAAATGCTATGTACGGA 59.530 40.000 0.00 0.00 46.21 4.69
83 84 5.335113 CCCAATCATGAAATGCTATGTACGG 60.335 44.000 0.00 0.00 46.21 4.02
84 85 5.692814 CCCAATCATGAAATGCTATGTACG 58.307 41.667 0.00 0.00 46.21 3.67
85 86 5.242393 AGCCCAATCATGAAATGCTATGTAC 59.758 40.000 0.00 0.00 46.21 2.90
86 87 5.387788 AGCCCAATCATGAAATGCTATGTA 58.612 37.500 0.00 0.00 46.21 2.29
87 88 4.220724 AGCCCAATCATGAAATGCTATGT 58.779 39.130 0.00 0.00 46.21 2.29
88 89 4.866508 AGCCCAATCATGAAATGCTATG 57.133 40.909 0.00 0.00 46.21 2.23
89 90 5.638133 AGTAGCCCAATCATGAAATGCTAT 58.362 37.500 17.21 8.34 46.21 2.97
90 91 5.052693 AGTAGCCCAATCATGAAATGCTA 57.947 39.130 0.00 7.45 46.21 3.49
91 92 3.907221 AGTAGCCCAATCATGAAATGCT 58.093 40.909 14.26 14.26 46.21 3.79
92 93 4.098349 TGAAGTAGCCCAATCATGAAATGC 59.902 41.667 0.00 0.32 46.21 3.56
93 94 8.821687 TGGATGAAGTAGCCCAATCATGAAATG 61.822 40.741 0.00 1.89 39.07 2.32
94 95 5.537674 GGATGAAGTAGCCCAATCATGAAAT 59.462 40.000 0.00 0.00 32.90 2.17
95 96 4.889409 GGATGAAGTAGCCCAATCATGAAA 59.111 41.667 0.00 0.00 32.90 2.69
96 97 4.079844 TGGATGAAGTAGCCCAATCATGAA 60.080 41.667 0.00 0.00 32.90 2.57
97 98 3.459227 TGGATGAAGTAGCCCAATCATGA 59.541 43.478 0.00 0.00 32.90 3.07
98 99 3.567164 GTGGATGAAGTAGCCCAATCATG 59.433 47.826 0.00 0.00 32.90 3.07
99 100 3.745480 CGTGGATGAAGTAGCCCAATCAT 60.745 47.826 0.00 0.00 35.33 2.45
100 101 2.419990 CGTGGATGAAGTAGCCCAATCA 60.420 50.000 0.00 0.00 32.41 2.57
101 102 2.158957 TCGTGGATGAAGTAGCCCAATC 60.159 50.000 0.00 0.00 32.41 2.67
102 103 1.837439 TCGTGGATGAAGTAGCCCAAT 59.163 47.619 0.00 0.00 32.41 3.16
103 104 1.207089 CTCGTGGATGAAGTAGCCCAA 59.793 52.381 0.00 0.00 32.41 4.12
104 105 0.824109 CTCGTGGATGAAGTAGCCCA 59.176 55.000 0.00 0.00 32.41 5.36
105 106 1.067821 CTCTCGTGGATGAAGTAGCCC 59.932 57.143 0.00 0.00 32.41 5.19
106 107 1.067821 CCTCTCGTGGATGAAGTAGCC 59.932 57.143 0.00 0.00 34.64 3.93
107 108 2.025155 TCCTCTCGTGGATGAAGTAGC 58.975 52.381 0.00 0.00 0.00 3.58
108 109 4.720649 TTTCCTCTCGTGGATGAAGTAG 57.279 45.455 0.00 0.00 35.83 2.57
109 110 5.477607 TTTTTCCTCTCGTGGATGAAGTA 57.522 39.130 0.00 0.00 35.83 2.24
110 111 4.351874 TTTTTCCTCTCGTGGATGAAGT 57.648 40.909 0.00 0.00 35.83 3.01
111 112 6.989169 AGATATTTTTCCTCTCGTGGATGAAG 59.011 38.462 0.00 0.00 35.83 3.02
112 113 6.889198 AGATATTTTTCCTCTCGTGGATGAA 58.111 36.000 0.00 0.00 35.83 2.57
113 114 6.485830 AGATATTTTTCCTCTCGTGGATGA 57.514 37.500 0.00 0.00 35.83 2.92
114 115 7.383572 CACTAGATATTTTTCCTCTCGTGGATG 59.616 40.741 0.00 0.00 35.83 3.51
115 116 7.437748 CACTAGATATTTTTCCTCTCGTGGAT 58.562 38.462 0.00 0.00 35.83 3.41
116 117 6.683110 GCACTAGATATTTTTCCTCTCGTGGA 60.683 42.308 0.00 0.00 34.83 4.02
117 118 5.463724 GCACTAGATATTTTTCCTCTCGTGG 59.536 44.000 0.00 0.00 34.83 4.94
118 119 6.276847 AGCACTAGATATTTTTCCTCTCGTG 58.723 40.000 0.00 0.00 36.39 4.35
119 120 6.472686 AGCACTAGATATTTTTCCTCTCGT 57.527 37.500 0.00 0.00 0.00 4.18
120 121 6.864165 GGTAGCACTAGATATTTTTCCTCTCG 59.136 42.308 0.00 0.00 0.00 4.04
121 122 7.727181 TGGTAGCACTAGATATTTTTCCTCTC 58.273 38.462 0.00 0.00 0.00 3.20
122 123 7.676683 TGGTAGCACTAGATATTTTTCCTCT 57.323 36.000 0.00 0.00 0.00 3.69
123 124 8.613482 GTTTGGTAGCACTAGATATTTTTCCTC 58.387 37.037 0.00 0.00 0.00 3.71
124 125 8.329502 AGTTTGGTAGCACTAGATATTTTTCCT 58.670 33.333 0.00 0.00 0.00 3.36
125 126 8.507524 AGTTTGGTAGCACTAGATATTTTTCC 57.492 34.615 0.00 0.00 0.00 3.13
126 127 9.774742 CAAGTTTGGTAGCACTAGATATTTTTC 57.225 33.333 0.00 0.00 0.00 2.29
127 128 9.515226 TCAAGTTTGGTAGCACTAGATATTTTT 57.485 29.630 0.00 0.00 0.00 1.94
128 129 9.167311 CTCAAGTTTGGTAGCACTAGATATTTT 57.833 33.333 0.00 0.00 0.00 1.82
129 130 7.770897 CCTCAAGTTTGGTAGCACTAGATATTT 59.229 37.037 0.00 0.00 0.00 1.40
130 131 7.092846 ACCTCAAGTTTGGTAGCACTAGATATT 60.093 37.037 0.00 0.00 34.36 1.28
131 132 6.384305 ACCTCAAGTTTGGTAGCACTAGATAT 59.616 38.462 0.00 0.00 34.36 1.63
132 133 5.720041 ACCTCAAGTTTGGTAGCACTAGATA 59.280 40.000 0.00 0.00 34.36 1.98
133 134 4.532521 ACCTCAAGTTTGGTAGCACTAGAT 59.467 41.667 0.00 0.00 34.36 1.98
134 135 3.901844 ACCTCAAGTTTGGTAGCACTAGA 59.098 43.478 0.00 0.00 34.36 2.43
135 136 4.273148 ACCTCAAGTTTGGTAGCACTAG 57.727 45.455 0.00 0.00 34.36 2.57
136 137 4.836736 AGTACCTCAAGTTTGGTAGCACTA 59.163 41.667 0.00 0.00 39.22 2.74
137 138 3.646637 AGTACCTCAAGTTTGGTAGCACT 59.353 43.478 0.00 0.62 39.22 4.40
138 139 4.004196 AGTACCTCAAGTTTGGTAGCAC 57.996 45.455 0.00 0.00 39.22 4.40
139 140 4.020839 GGTAGTACCTCAAGTTTGGTAGCA 60.021 45.833 12.41 0.00 39.22 3.49
140 141 4.020839 TGGTAGTACCTCAAGTTTGGTAGC 60.021 45.833 20.07 0.00 39.22 3.58
141 142 5.733620 TGGTAGTACCTCAAGTTTGGTAG 57.266 43.478 20.07 0.00 39.22 3.18
142 143 5.781306 TCATGGTAGTACCTCAAGTTTGGTA 59.219 40.000 20.07 1.49 39.58 3.25
143 144 4.595781 TCATGGTAGTACCTCAAGTTTGGT 59.404 41.667 20.07 3.20 39.58 3.67
144 145 5.160607 TCATGGTAGTACCTCAAGTTTGG 57.839 43.478 20.07 0.36 39.58 3.28
145 146 7.327975 TGTATCATGGTAGTACCTCAAGTTTG 58.672 38.462 20.07 6.80 39.58 2.93
146 147 7.490657 TGTATCATGGTAGTACCTCAAGTTT 57.509 36.000 20.07 2.18 39.58 2.66
147 148 7.490657 TTGTATCATGGTAGTACCTCAAGTT 57.509 36.000 20.07 5.57 39.58 2.66
148 149 6.407074 GCTTGTATCATGGTAGTACCTCAAGT 60.407 42.308 20.07 5.64 39.58 3.16
149 150 5.986135 GCTTGTATCATGGTAGTACCTCAAG 59.014 44.000 20.07 20.06 39.58 3.02
150 151 5.661312 AGCTTGTATCATGGTAGTACCTCAA 59.339 40.000 20.07 13.05 39.58 3.02
151 152 5.208890 AGCTTGTATCATGGTAGTACCTCA 58.791 41.667 20.07 1.11 39.58 3.86
152 153 5.793030 AGCTTGTATCATGGTAGTACCTC 57.207 43.478 20.07 4.97 39.58 3.85
153 154 5.900123 AGAAGCTTGTATCATGGTAGTACCT 59.100 40.000 20.07 2.51 39.58 3.08
154 155 6.163135 AGAAGCTTGTATCATGGTAGTACC 57.837 41.667 12.80 12.80 39.22 3.34
155 156 7.371936 CCTAGAAGCTTGTATCATGGTAGTAC 58.628 42.308 2.10 0.00 0.00 2.73
156 157 6.015350 GCCTAGAAGCTTGTATCATGGTAGTA 60.015 42.308 2.10 0.00 0.00 1.82
157 158 5.221541 GCCTAGAAGCTTGTATCATGGTAGT 60.222 44.000 2.10 0.00 0.00 2.73
158 159 5.233988 GCCTAGAAGCTTGTATCATGGTAG 58.766 45.833 2.10 0.00 0.00 3.18
159 160 4.040461 GGCCTAGAAGCTTGTATCATGGTA 59.960 45.833 2.10 0.00 0.00 3.25
160 161 3.181450 GGCCTAGAAGCTTGTATCATGGT 60.181 47.826 2.10 0.00 0.00 3.55
161 162 3.406764 GGCCTAGAAGCTTGTATCATGG 58.593 50.000 2.10 2.74 0.00 3.66
162 163 3.062763 CGGCCTAGAAGCTTGTATCATG 58.937 50.000 2.10 0.00 0.00 3.07
163 164 2.700897 ACGGCCTAGAAGCTTGTATCAT 59.299 45.455 2.10 0.00 0.00 2.45
164 165 2.108168 ACGGCCTAGAAGCTTGTATCA 58.892 47.619 2.10 0.00 0.00 2.15
165 166 2.866762 CAACGGCCTAGAAGCTTGTATC 59.133 50.000 2.10 0.00 0.00 2.24
166 167 2.420129 CCAACGGCCTAGAAGCTTGTAT 60.420 50.000 2.10 0.00 0.00 2.29
167 168 1.066430 CCAACGGCCTAGAAGCTTGTA 60.066 52.381 2.10 2.63 0.00 2.41
168 169 0.321653 CCAACGGCCTAGAAGCTTGT 60.322 55.000 2.10 1.06 0.00 3.16
169 170 0.036388 TCCAACGGCCTAGAAGCTTG 60.036 55.000 2.10 0.00 0.00 4.01
170 171 0.912486 ATCCAACGGCCTAGAAGCTT 59.088 50.000 0.00 0.00 0.00 3.74
171 172 0.912486 AATCCAACGGCCTAGAAGCT 59.088 50.000 0.00 0.00 0.00 3.74
172 173 1.134371 AGAATCCAACGGCCTAGAAGC 60.134 52.381 0.00 0.00 0.00 3.86
173 174 2.799917 CGAGAATCCAACGGCCTAGAAG 60.800 54.545 0.00 0.00 0.00 2.85
174 175 1.136305 CGAGAATCCAACGGCCTAGAA 59.864 52.381 0.00 0.00 0.00 2.10
175 176 0.744874 CGAGAATCCAACGGCCTAGA 59.255 55.000 0.00 0.00 0.00 2.43
176 177 0.249489 CCGAGAATCCAACGGCCTAG 60.249 60.000 0.00 0.00 40.19 3.02
177 178 0.685131 TCCGAGAATCCAACGGCCTA 60.685 55.000 0.00 0.00 45.25 3.93
178 179 1.338136 ATCCGAGAATCCAACGGCCT 61.338 55.000 0.00 0.00 45.25 5.19
179 180 0.880718 GATCCGAGAATCCAACGGCC 60.881 60.000 0.00 0.00 45.25 6.13
180 181 1.215655 CGATCCGAGAATCCAACGGC 61.216 60.000 0.00 0.00 45.25 5.68
181 182 0.597637 CCGATCCGAGAATCCAACGG 60.598 60.000 0.00 0.00 46.71 4.44
182 183 0.384309 TCCGATCCGAGAATCCAACG 59.616 55.000 0.00 0.00 0.00 4.10
183 184 1.854227 GTCCGATCCGAGAATCCAAC 58.146 55.000 0.00 0.00 0.00 3.77
184 185 0.384309 CGTCCGATCCGAGAATCCAA 59.616 55.000 0.00 0.00 0.00 3.53
185 186 1.452953 CCGTCCGATCCGAGAATCCA 61.453 60.000 0.00 0.00 0.00 3.41
186 187 1.286260 CCGTCCGATCCGAGAATCC 59.714 63.158 0.00 0.00 0.00 3.01
187 188 1.371881 GCCGTCCGATCCGAGAATC 60.372 63.158 0.00 0.00 0.00 2.52
188 189 1.392710 AAGCCGTCCGATCCGAGAAT 61.393 55.000 0.00 0.00 0.00 2.40
189 190 0.749091 TAAGCCGTCCGATCCGAGAA 60.749 55.000 0.00 0.00 0.00 2.87
190 191 0.536687 ATAAGCCGTCCGATCCGAGA 60.537 55.000 0.00 0.00 0.00 4.04
191 192 1.130749 CTATAAGCCGTCCGATCCGAG 59.869 57.143 0.00 0.00 0.00 4.63
192 193 1.162698 CTATAAGCCGTCCGATCCGA 58.837 55.000 0.00 0.00 0.00 4.55
193 194 1.130749 CTCTATAAGCCGTCCGATCCG 59.869 57.143 0.00 0.00 0.00 4.18
194 195 2.434428 TCTCTATAAGCCGTCCGATCC 58.566 52.381 0.00 0.00 0.00 3.36
195 196 4.396790 AGAATCTCTATAAGCCGTCCGATC 59.603 45.833 0.00 0.00 0.00 3.69
196 197 4.156922 CAGAATCTCTATAAGCCGTCCGAT 59.843 45.833 0.00 0.00 0.00 4.18
197 198 3.502595 CAGAATCTCTATAAGCCGTCCGA 59.497 47.826 0.00 0.00 0.00 4.55
198 199 3.827625 CAGAATCTCTATAAGCCGTCCG 58.172 50.000 0.00 0.00 0.00 4.79
199 200 3.005897 TGCAGAATCTCTATAAGCCGTCC 59.994 47.826 0.00 0.00 0.00 4.79
200 201 4.244425 TGCAGAATCTCTATAAGCCGTC 57.756 45.455 0.00 0.00 0.00 4.79
201 202 4.141937 TGTTGCAGAATCTCTATAAGCCGT 60.142 41.667 0.00 0.00 0.00 5.68
202 203 4.371786 TGTTGCAGAATCTCTATAAGCCG 58.628 43.478 0.00 0.00 0.00 5.52
203 204 6.874288 AATGTTGCAGAATCTCTATAAGCC 57.126 37.500 0.00 0.00 0.00 4.35
235 236 9.197306 ACACAATTTCTAAACTTTTAGGAGGTT 57.803 29.630 8.54 0.00 40.35 3.50
236 237 8.762481 ACACAATTTCTAAACTTTTAGGAGGT 57.238 30.769 8.54 0.00 40.35 3.85
246 247 9.331282 GCTGGATCTATACACAATTTCTAAACT 57.669 33.333 0.00 0.00 0.00 2.66
247 248 9.109393 TGCTGGATCTATACACAATTTCTAAAC 57.891 33.333 0.00 0.00 0.00 2.01
248 249 9.330063 CTGCTGGATCTATACACAATTTCTAAA 57.670 33.333 0.00 0.00 0.00 1.85
249 250 8.704668 TCTGCTGGATCTATACACAATTTCTAA 58.295 33.333 0.00 0.00 0.00 2.10
250 251 8.250143 TCTGCTGGATCTATACACAATTTCTA 57.750 34.615 0.00 0.00 0.00 2.10
251 252 7.129457 TCTGCTGGATCTATACACAATTTCT 57.871 36.000 0.00 0.00 0.00 2.52
252 253 7.976135 ATCTGCTGGATCTATACACAATTTC 57.024 36.000 0.00 0.00 0.00 2.17
253 254 7.976135 GATCTGCTGGATCTATACACAATTT 57.024 36.000 11.24 0.00 45.38 1.82
266 267 1.211457 GAGTGGTTGGATCTGCTGGAT 59.789 52.381 0.00 0.00 37.37 3.41
267 268 0.615331 GAGTGGTTGGATCTGCTGGA 59.385 55.000 0.00 0.00 0.00 3.86
268 269 0.393537 GGAGTGGTTGGATCTGCTGG 60.394 60.000 0.00 0.00 0.00 4.85
269 270 0.617413 AGGAGTGGTTGGATCTGCTG 59.383 55.000 0.00 0.00 0.00 4.41
270 271 2.114616 CTAGGAGTGGTTGGATCTGCT 58.885 52.381 0.00 0.00 34.52 4.24
271 272 2.111384 TCTAGGAGTGGTTGGATCTGC 58.889 52.381 0.00 0.00 0.00 4.26
272 273 3.494048 GCATCTAGGAGTGGTTGGATCTG 60.494 52.174 0.00 0.00 0.00 2.90
273 274 2.703007 GCATCTAGGAGTGGTTGGATCT 59.297 50.000 0.00 0.00 0.00 2.75
274 275 2.224402 GGCATCTAGGAGTGGTTGGATC 60.224 54.545 0.00 0.00 0.00 3.36
275 276 1.771255 GGCATCTAGGAGTGGTTGGAT 59.229 52.381 0.00 0.00 0.00 3.41
276 277 1.204146 GGCATCTAGGAGTGGTTGGA 58.796 55.000 0.00 0.00 0.00 3.53
277 278 0.179073 CGGCATCTAGGAGTGGTTGG 60.179 60.000 0.00 0.00 0.00 3.77
278 279 0.537188 ACGGCATCTAGGAGTGGTTG 59.463 55.000 0.00 0.00 0.00 3.77
279 280 0.824759 GACGGCATCTAGGAGTGGTT 59.175 55.000 0.00 0.00 0.00 3.67
280 281 1.043673 GGACGGCATCTAGGAGTGGT 61.044 60.000 0.00 0.00 0.00 4.16
281 282 1.043116 TGGACGGCATCTAGGAGTGG 61.043 60.000 0.00 0.00 0.00 4.00
282 283 1.000283 GATGGACGGCATCTAGGAGTG 60.000 57.143 0.00 0.00 0.00 3.51
283 284 1.133325 AGATGGACGGCATCTAGGAGT 60.133 52.381 0.00 0.00 37.61 3.85
284 285 1.271934 CAGATGGACGGCATCTAGGAG 59.728 57.143 0.00 0.00 37.30 3.69
285 286 1.133482 TCAGATGGACGGCATCTAGGA 60.133 52.381 0.00 0.00 37.30 2.94
286 287 1.271934 CTCAGATGGACGGCATCTAGG 59.728 57.143 0.00 0.00 37.30 3.02
287 288 2.234143 TCTCAGATGGACGGCATCTAG 58.766 52.381 0.00 0.00 37.30 2.43
288 289 2.364972 TCTCAGATGGACGGCATCTA 57.635 50.000 0.00 0.00 37.30 1.98
289 290 1.489481 TTCTCAGATGGACGGCATCT 58.511 50.000 0.00 0.00 39.75 2.90
290 291 2.411904 GATTCTCAGATGGACGGCATC 58.588 52.381 0.00 0.00 0.00 3.91
291 292 1.071385 GGATTCTCAGATGGACGGCAT 59.929 52.381 0.00 0.00 0.00 4.40
292 293 0.465705 GGATTCTCAGATGGACGGCA 59.534 55.000 0.00 0.00 0.00 5.69
293 294 0.598680 CGGATTCTCAGATGGACGGC 60.599 60.000 0.00 0.00 0.00 5.68
294 295 1.032794 TCGGATTCTCAGATGGACGG 58.967 55.000 0.00 0.00 0.00 4.79
295 296 1.598183 CGTCGGATTCTCAGATGGACG 60.598 57.143 3.82 3.82 39.57 4.79
296 297 1.269309 CCGTCGGATTCTCAGATGGAC 60.269 57.143 4.91 0.00 46.40 4.02
297 298 1.032794 CCGTCGGATTCTCAGATGGA 58.967 55.000 4.91 0.00 46.40 3.41
298 299 0.598680 GCCGTCGGATTCTCAGATGG 60.599 60.000 17.49 10.15 46.27 3.51
299 300 0.387202 AGCCGTCGGATTCTCAGATG 59.613 55.000 17.49 0.00 0.00 2.90
300 301 0.671251 GAGCCGTCGGATTCTCAGAT 59.329 55.000 17.49 0.00 0.00 2.90
301 302 0.679960 TGAGCCGTCGGATTCTCAGA 60.680 55.000 17.49 0.00 32.43 3.27
302 303 0.248825 CTGAGCCGTCGGATTCTCAG 60.249 60.000 24.08 24.08 44.18 3.35
303 304 0.679960 TCTGAGCCGTCGGATTCTCA 60.680 55.000 17.49 16.71 32.73 3.27
304 305 0.456221 TTCTGAGCCGTCGGATTCTC 59.544 55.000 17.49 12.77 37.94 2.87
305 306 0.457851 CTTCTGAGCCGTCGGATTCT 59.542 55.000 17.49 1.82 37.94 2.40
306 307 0.173708 ACTTCTGAGCCGTCGGATTC 59.826 55.000 17.49 12.21 37.94 2.52
307 308 0.173708 GACTTCTGAGCCGTCGGATT 59.826 55.000 17.49 1.12 37.94 3.01
308 309 1.668101 GGACTTCTGAGCCGTCGGAT 61.668 60.000 17.49 9.33 37.94 4.18
309 310 2.341101 GGACTTCTGAGCCGTCGGA 61.341 63.158 17.49 0.00 36.19 4.55
310 311 2.182030 GGACTTCTGAGCCGTCGG 59.818 66.667 6.99 6.99 0.00 4.79
311 312 1.642037 TACGGACTTCTGAGCCGTCG 61.642 60.000 19.59 6.36 45.87 5.12
312 313 0.739561 ATACGGACTTCTGAGCCGTC 59.260 55.000 19.59 9.12 45.87 4.79
314 315 0.738975 TGATACGGACTTCTGAGCCG 59.261 55.000 12.19 12.19 43.54 5.52
315 316 1.534175 CGTGATACGGACTTCTGAGCC 60.534 57.143 0.00 0.00 38.08 4.70
316 317 1.828832 CGTGATACGGACTTCTGAGC 58.171 55.000 0.00 0.00 38.08 4.26
327 328 3.822996 CCTTAGATGCTACCGTGATACG 58.177 50.000 0.00 0.00 42.11 3.06
328 329 3.256136 AGCCTTAGATGCTACCGTGATAC 59.744 47.826 0.00 0.00 37.28 2.24
329 330 3.497332 AGCCTTAGATGCTACCGTGATA 58.503 45.455 0.00 0.00 37.28 2.15
330 331 2.320781 AGCCTTAGATGCTACCGTGAT 58.679 47.619 0.00 0.00 37.28 3.06
331 332 1.776662 AGCCTTAGATGCTACCGTGA 58.223 50.000 0.00 0.00 37.28 4.35
332 333 2.205074 CAAGCCTTAGATGCTACCGTG 58.795 52.381 0.00 0.00 38.34 4.94
333 334 1.139058 CCAAGCCTTAGATGCTACCGT 59.861 52.381 0.00 0.00 38.34 4.83
334 335 1.871080 CCAAGCCTTAGATGCTACCG 58.129 55.000 0.00 0.00 38.34 4.02
335 336 1.134098 TGCCAAGCCTTAGATGCTACC 60.134 52.381 0.00 0.00 38.34 3.18
336 337 2.216898 CTGCCAAGCCTTAGATGCTAC 58.783 52.381 0.00 0.00 38.34 3.58
337 338 1.141657 CCTGCCAAGCCTTAGATGCTA 59.858 52.381 0.00 0.00 38.34 3.49
338 339 0.106819 CCTGCCAAGCCTTAGATGCT 60.107 55.000 0.00 0.00 41.89 3.79
339 340 0.107017 TCCTGCCAAGCCTTAGATGC 60.107 55.000 0.00 0.00 0.00 3.91
340 341 1.964552 CTCCTGCCAAGCCTTAGATG 58.035 55.000 0.00 0.00 0.00 2.90
341 342 0.182299 GCTCCTGCCAAGCCTTAGAT 59.818 55.000 0.00 0.00 33.53 1.98
342 343 1.200760 TGCTCCTGCCAAGCCTTAGA 61.201 55.000 0.30 0.00 39.05 2.10
343 344 0.747283 CTGCTCCTGCCAAGCCTTAG 60.747 60.000 0.30 0.00 39.05 2.18
344 345 1.200760 TCTGCTCCTGCCAAGCCTTA 61.201 55.000 0.30 0.00 39.05 2.69
345 346 1.860944 ATCTGCTCCTGCCAAGCCTT 61.861 55.000 0.30 0.00 39.05 4.35
346 347 0.984961 TATCTGCTCCTGCCAAGCCT 60.985 55.000 0.30 0.00 39.05 4.58
347 348 0.110104 ATATCTGCTCCTGCCAAGCC 59.890 55.000 0.30 0.00 39.05 4.35
348 349 1.878734 GAATATCTGCTCCTGCCAAGC 59.121 52.381 0.00 0.00 40.26 4.01
349 350 3.401182 GAGAATATCTGCTCCTGCCAAG 58.599 50.000 0.00 0.00 38.71 3.61
350 351 2.105477 GGAGAATATCTGCTCCTGCCAA 59.895 50.000 10.44 0.00 45.72 4.52
351 352 1.696336 GGAGAATATCTGCTCCTGCCA 59.304 52.381 10.44 0.00 45.72 4.92
352 353 2.470983 GGAGAATATCTGCTCCTGCC 57.529 55.000 10.44 0.00 45.72 4.85
357 358 1.964223 TGGACGGGAGAATATCTGCTC 59.036 52.381 0.00 0.00 35.01 4.26
358 359 1.689273 GTGGACGGGAGAATATCTGCT 59.311 52.381 0.00 0.00 35.01 4.24
359 360 1.603172 CGTGGACGGGAGAATATCTGC 60.603 57.143 0.00 0.00 33.75 4.26
360 361 1.954382 TCGTGGACGGGAGAATATCTG 59.046 52.381 0.00 0.00 40.29 2.90
361 362 2.158652 TCTCGTGGACGGGAGAATATCT 60.159 50.000 0.00 0.00 44.94 1.98
362 363 2.228059 TCTCGTGGACGGGAGAATATC 58.772 52.381 0.00 0.00 44.94 1.63
363 364 2.359981 TCTCGTGGACGGGAGAATAT 57.640 50.000 0.00 0.00 44.94 1.28
364 365 3.888424 TCTCGTGGACGGGAGAATA 57.112 52.632 0.00 0.00 44.94 1.75
365 366 4.757773 TCTCGTGGACGGGAGAAT 57.242 55.556 0.00 0.00 44.94 2.40
370 371 1.068083 CATGGATCTCGTGGACGGG 59.932 63.158 0.00 0.00 42.17 5.28
371 372 0.459899 TTCATGGATCTCGTGGACGG 59.540 55.000 0.00 0.00 40.29 4.79
372 373 2.293677 TTTCATGGATCTCGTGGACG 57.706 50.000 0.00 0.00 41.45 4.79
373 374 3.600388 AGTTTTCATGGATCTCGTGGAC 58.400 45.455 0.00 0.00 33.31 4.02
374 375 3.260632 TGAGTTTTCATGGATCTCGTGGA 59.739 43.478 0.00 0.00 33.31 4.02
375 376 3.599343 TGAGTTTTCATGGATCTCGTGG 58.401 45.455 0.00 0.00 33.31 4.94
376 377 5.352293 TGATTGAGTTTTCATGGATCTCGTG 59.648 40.000 0.00 0.00 32.27 4.35
377 378 5.491070 TGATTGAGTTTTCATGGATCTCGT 58.509 37.500 0.00 0.00 32.27 4.18
378 379 6.314648 TCTTGATTGAGTTTTCATGGATCTCG 59.685 38.462 0.00 0.00 32.27 4.04
379 380 7.621428 TCTTGATTGAGTTTTCATGGATCTC 57.379 36.000 0.00 0.00 32.27 2.75
380 381 8.413309 TTTCTTGATTGAGTTTTCATGGATCT 57.587 30.769 0.00 0.00 32.27 2.75
381 382 8.517878 TCTTTCTTGATTGAGTTTTCATGGATC 58.482 33.333 0.00 0.00 32.27 3.36
382 383 8.413309 TCTTTCTTGATTGAGTTTTCATGGAT 57.587 30.769 0.00 0.00 32.27 3.41
383 384 7.720957 TCTCTTTCTTGATTGAGTTTTCATGGA 59.279 33.333 0.00 0.00 32.27 3.41
384 385 7.879070 TCTCTTTCTTGATTGAGTTTTCATGG 58.121 34.615 0.00 0.00 32.27 3.66
385 386 9.740239 TTTCTCTTTCTTGATTGAGTTTTCATG 57.260 29.630 0.00 0.00 32.27 3.07
386 387 9.741647 GTTTCTCTTTCTTGATTGAGTTTTCAT 57.258 29.630 0.00 0.00 32.27 2.57
387 388 7.910162 CGTTTCTCTTTCTTGATTGAGTTTTCA 59.090 33.333 0.00 0.00 0.00 2.69
388 389 7.377131 CCGTTTCTCTTTCTTGATTGAGTTTTC 59.623 37.037 0.00 0.00 0.00 2.29
389 390 7.067008 TCCGTTTCTCTTTCTTGATTGAGTTTT 59.933 33.333 0.00 0.00 0.00 2.43
390 391 6.542370 TCCGTTTCTCTTTCTTGATTGAGTTT 59.458 34.615 0.00 0.00 0.00 2.66
391 392 6.017852 GTCCGTTTCTCTTTCTTGATTGAGTT 60.018 38.462 0.00 0.00 0.00 3.01
392 393 5.467063 GTCCGTTTCTCTTTCTTGATTGAGT 59.533 40.000 0.00 0.00 0.00 3.41
393 394 5.698545 AGTCCGTTTCTCTTTCTTGATTGAG 59.301 40.000 0.00 0.00 0.00 3.02
394 395 5.466728 CAGTCCGTTTCTCTTTCTTGATTGA 59.533 40.000 0.00 0.00 0.00 2.57
395 396 5.683859 CAGTCCGTTTCTCTTTCTTGATTG 58.316 41.667 0.00 0.00 0.00 2.67
396 397 4.214332 GCAGTCCGTTTCTCTTTCTTGATT 59.786 41.667 0.00 0.00 0.00 2.57
397 398 3.748568 GCAGTCCGTTTCTCTTTCTTGAT 59.251 43.478 0.00 0.00 0.00 2.57
398 399 3.131396 GCAGTCCGTTTCTCTTTCTTGA 58.869 45.455 0.00 0.00 0.00 3.02
399 400 2.872245 TGCAGTCCGTTTCTCTTTCTTG 59.128 45.455 0.00 0.00 0.00 3.02
400 401 3.194005 TGCAGTCCGTTTCTCTTTCTT 57.806 42.857 0.00 0.00 0.00 2.52
401 402 2.910688 TGCAGTCCGTTTCTCTTTCT 57.089 45.000 0.00 0.00 0.00 2.52
402 403 3.251004 ACAATGCAGTCCGTTTCTCTTTC 59.749 43.478 0.00 0.00 0.00 2.62
403 404 3.214328 ACAATGCAGTCCGTTTCTCTTT 58.786 40.909 0.00 0.00 0.00 2.52
404 405 2.851195 ACAATGCAGTCCGTTTCTCTT 58.149 42.857 0.00 0.00 0.00 2.85
405 406 2.550830 ACAATGCAGTCCGTTTCTCT 57.449 45.000 0.00 0.00 0.00 3.10
406 407 2.548057 TGAACAATGCAGTCCGTTTCTC 59.452 45.455 0.00 0.00 0.00 2.87
407 408 2.290641 GTGAACAATGCAGTCCGTTTCT 59.709 45.455 0.00 0.00 0.00 2.52
408 409 2.032799 TGTGAACAATGCAGTCCGTTTC 59.967 45.455 0.00 0.00 0.00 2.78
409 410 2.020720 TGTGAACAATGCAGTCCGTTT 58.979 42.857 0.00 0.00 0.00 3.60
410 411 1.333619 GTGTGAACAATGCAGTCCGTT 59.666 47.619 0.00 0.00 0.00 4.44
411 412 0.944386 GTGTGAACAATGCAGTCCGT 59.056 50.000 0.00 0.00 0.00 4.69
412 413 0.238289 GGTGTGAACAATGCAGTCCG 59.762 55.000 0.00 0.00 0.00 4.79
413 414 1.317613 TGGTGTGAACAATGCAGTCC 58.682 50.000 0.00 0.00 0.00 3.85
414 415 3.426695 GCTATGGTGTGAACAATGCAGTC 60.427 47.826 0.00 0.00 0.00 3.51
415 416 2.489329 GCTATGGTGTGAACAATGCAGT 59.511 45.455 0.00 0.00 0.00 4.40
416 417 2.159338 GGCTATGGTGTGAACAATGCAG 60.159 50.000 0.00 0.00 0.00 4.41
428 429 0.107703 TTGCTTCTCCGGCTATGGTG 60.108 55.000 0.00 0.00 0.00 4.17
431 432 1.936547 GAACTTGCTTCTCCGGCTATG 59.063 52.381 0.00 0.00 0.00 2.23
445 446 1.993370 CTTAACCGGCGAGAGAACTTG 59.007 52.381 9.30 0.00 0.00 3.16
449 450 1.217244 GCCTTAACCGGCGAGAGAA 59.783 57.895 9.30 0.00 40.79 2.87
464 465 3.684402 ACGGAGTCTGCTGAGTAGCCT 62.684 57.143 0.00 0.00 44.50 4.58
470 471 1.214062 GTCCACGGAGTCTGCTGAG 59.786 63.158 0.00 0.00 41.61 3.35
472 473 1.373497 GTGTCCACGGAGTCTGCTG 60.373 63.158 0.00 0.00 41.61 4.41
498 499 2.513897 GGGAAGAATGGGGACGCG 60.514 66.667 3.53 3.53 0.00 6.01
506 507 2.679837 CGACTGGTGAATGGGAAGAATG 59.320 50.000 0.00 0.00 0.00 2.67
508 509 1.003118 CCGACTGGTGAATGGGAAGAA 59.997 52.381 0.00 0.00 0.00 2.52
525 526 1.270826 CTCTCACTCAAGCTCAACCGA 59.729 52.381 0.00 0.00 0.00 4.69
551 552 3.376078 CAGCTGCCGGCCACATTT 61.376 61.111 26.77 0.00 43.05 2.32
584 587 1.135170 GGCTTCAAATCAGCTTCTGGC 60.135 52.381 0.00 0.00 37.43 4.85
603 609 2.481185 GCTATCTCTACGTCTCCTTCGG 59.519 54.545 0.00 0.00 0.00 4.30
615 621 1.075536 TCCTCCGCCATGCTATCTCTA 59.924 52.381 0.00 0.00 0.00 2.43
701 715 4.742201 CGAGGCCGGTGAGGTGTG 62.742 72.222 1.90 0.00 43.70 3.82
757 771 3.303760 GGAGAGCGATTAAACAAGTCGTC 59.696 47.826 0.00 0.00 37.66 4.20
814 841 1.534595 GCATGCGGCTGGAATTTAGTG 60.535 52.381 0.00 0.00 40.25 2.74
815 842 0.740737 GCATGCGGCTGGAATTTAGT 59.259 50.000 0.00 0.00 40.25 2.24
816 843 3.557207 GCATGCGGCTGGAATTTAG 57.443 52.632 0.00 0.00 40.25 1.85
933 960 2.803492 GCTATGTAGTGGTAGCAGCACC 60.803 54.545 12.71 0.75 46.99 5.01
934 961 2.474816 GCTATGTAGTGGTAGCAGCAC 58.525 52.381 0.00 9.53 46.20 4.40
936 963 1.412710 TGGCTATGTAGTGGTAGCAGC 59.587 52.381 0.00 0.00 43.91 5.25
939 966 1.269621 CGGTGGCTATGTAGTGGTAGC 60.270 57.143 0.00 0.00 41.95 3.58
944 971 0.821517 TGGTCGGTGGCTATGTAGTG 59.178 55.000 0.00 0.00 0.00 2.74
979 1014 2.680913 CCGCTGCTTTCTTGACCCG 61.681 63.158 0.00 0.00 0.00 5.28
1277 1411 5.873179 ACACTTGGTGAACAATATAACCG 57.127 39.130 4.62 0.00 38.65 4.44
1319 1478 4.399219 GGGGGAAAAGACTATGAATAGCC 58.601 47.826 0.00 0.00 33.68 3.93
1455 3257 6.727824 ACACTAACTACATGCATCAAGAAC 57.272 37.500 10.98 0.00 0.00 3.01
1484 3296 1.472878 CTTGACCGGTCGAGAGAATGA 59.527 52.381 38.76 13.40 45.01 2.57
1569 3381 4.422073 AAGACATGTGTTCAGAGAACCA 57.578 40.909 1.15 5.70 0.00 3.67
1601 3416 7.502226 TCCTAGATCACAGAACAAAAACAACAT 59.498 33.333 0.00 0.00 0.00 2.71
1707 3522 4.732285 TTTTGCTGAATCGAAGTCAGTC 57.268 40.909 23.11 17.55 43.71 3.51
1851 3666 1.992557 AGACAGATAAGGCCCACCAAA 59.007 47.619 0.00 0.00 39.06 3.28
1863 3678 4.024809 CGTACATCAAGCGAGAGACAGATA 60.025 45.833 0.00 0.00 0.00 1.98
2002 3823 0.606673 GGAGGTTGCTGGGAGTGAAC 60.607 60.000 0.00 0.00 0.00 3.18
2030 3857 5.662674 AGTTACTATCTTGGAGGTGACAC 57.337 43.478 0.00 0.00 0.00 3.67
2088 3942 9.791820 GAAGAATAAGTACCAGAAGAGTAAGTC 57.208 37.037 0.00 0.00 0.00 3.01
2155 4019 1.079405 GTAACGCTGGTAGCCTGCA 60.079 57.895 15.41 0.00 46.59 4.41
2185 4049 3.639094 CTGACCTGTCCTTATCCGAGAAT 59.361 47.826 0.00 0.00 0.00 2.40
2347 4217 0.380378 TGTTTTGCTCGACTTGCCAC 59.620 50.000 0.00 0.00 0.00 5.01
2414 4302 2.815647 GCCTCAGCCTTCGAACGG 60.816 66.667 0.00 1.23 0.00 4.44
2476 4364 2.530460 TCCAGAACCCCCATCATTTG 57.470 50.000 0.00 0.00 0.00 2.32
2552 4440 3.428862 GCTCTAGAACTGGAACTCTCTGC 60.429 52.174 0.00 0.00 0.00 4.26
2663 4551 2.735444 GCTGCTCATGCTACTCGTGTAA 60.735 50.000 0.00 0.00 40.48 2.41
2723 4617 1.957177 TCTAGGCGGTCTGCTTCATAG 59.043 52.381 3.10 2.17 45.43 2.23
2824 4723 6.672266 AACAAGAGATCTGAGTTCCTACAA 57.328 37.500 0.00 0.00 0.00 2.41
2831 4730 6.148480 GTGCATGTTAACAAGAGATCTGAGTT 59.852 38.462 13.23 4.62 0.00 3.01
2864 4869 4.891992 TGGCTATGGCTACTCCTAAATC 57.108 45.455 0.00 0.00 38.73 2.17
3432 5696 5.761726 GCTCCATTCATAATCATGTGACAGA 59.238 40.000 0.00 0.00 33.57 3.41
3433 5697 5.763698 AGCTCCATTCATAATCATGTGACAG 59.236 40.000 0.00 0.00 33.57 3.51
3478 5744 9.832445 GAACATTGATAGATACTGAGGGTTTAA 57.168 33.333 0.00 0.00 0.00 1.52
3561 5835 4.020218 TCCACCTCTTGTCTGAAGGTATTG 60.020 45.833 0.00 0.00 0.00 1.90
3654 5971 6.745907 TCAATAATACAGTAGATATCGCGTGC 59.254 38.462 5.77 0.00 0.00 5.34
3658 5975 9.497030 CTGTCTCAATAATACAGTAGATATCGC 57.503 37.037 0.00 0.00 36.66 4.58
4690 8961 6.711194 ACATGAATCAACATTGAATTTTGGCA 59.289 30.769 0.00 2.18 41.13 4.92
4737 9031 4.317488 TGGACGGTTTAGGTAACAATGTC 58.683 43.478 0.00 0.00 38.55 3.06
5014 9338 7.569240 ACCTAATAGAACCAAATGAGAAGAGG 58.431 38.462 0.00 0.00 0.00 3.69
5024 9348 5.876357 AGTCTGCAACCTAATAGAACCAAA 58.124 37.500 0.00 0.00 0.00 3.28
5069 9393 6.866248 AGTTTTTGTTGACAGAAATGTTTCGT 59.134 30.769 3.59 2.24 41.92 3.85
5270 9628 5.704515 ACATCTGTTGTTCAAGAATCTCCAG 59.295 40.000 0.00 0.00 33.74 3.86
5436 9797 6.640518 TGGAGTGTATGTAGAAAAGTCATCC 58.359 40.000 0.00 0.00 0.00 3.51
5454 9815 7.038154 TCTAAGAAACCACAAAAATGGAGTG 57.962 36.000 0.00 0.00 43.02 3.51
5508 10306 4.901197 TTCACCATTCACCAGTAAGCTA 57.099 40.909 0.00 0.00 0.00 3.32
5509 10307 3.788227 TTCACCATTCACCAGTAAGCT 57.212 42.857 0.00 0.00 0.00 3.74
5510 10308 4.265073 AGATTCACCATTCACCAGTAAGC 58.735 43.478 0.00 0.00 0.00 3.09
5653 10468 1.639298 GCTCCGATGACCTGCAACAC 61.639 60.000 0.00 0.00 0.00 3.32
5664 10479 2.046314 AAACCCACGGCTCCGATG 60.046 61.111 15.95 9.23 42.83 3.84
5739 10559 1.140312 ACCTTTCCCAACAGCTCTCA 58.860 50.000 0.00 0.00 0.00 3.27
5768 10843 2.161855 CACTAGCCTGCAAAATGGTGA 58.838 47.619 3.08 0.00 0.00 4.02
5769 10844 2.161855 TCACTAGCCTGCAAAATGGTG 58.838 47.619 0.00 0.00 0.00 4.17
5802 10877 1.843851 AGTGGGATCGGAAATTGGCTA 59.156 47.619 0.00 0.00 0.00 3.93
5811 10886 5.011738 GGATAGTTGATTTAGTGGGATCGGA 59.988 44.000 0.00 0.00 0.00 4.55
5830 10905 1.489481 TCACTGCACAGAGGGGATAG 58.511 55.000 4.31 0.00 0.00 2.08
5967 11043 1.741706 CAGCCATCATCTTTGACGCTT 59.258 47.619 0.00 0.00 38.25 4.68
5997 11073 6.520021 TCCATAATCCTCCATCAGAACATT 57.480 37.500 0.00 0.00 0.00 2.71
6045 11121 7.894364 ACTGGTAGTCCTCTTTAGAAGTATCAA 59.106 37.037 0.00 0.00 34.23 2.57
6046 11122 7.411808 ACTGGTAGTCCTCTTTAGAAGTATCA 58.588 38.462 0.00 0.00 34.23 2.15
6047 11123 7.885009 ACTGGTAGTCCTCTTTAGAAGTATC 57.115 40.000 0.00 0.00 34.23 2.24
6048 11124 7.779326 GGTACTGGTAGTCCTCTTTAGAAGTAT 59.221 40.741 0.00 0.00 34.23 2.12
6049 11125 7.115414 GGTACTGGTAGTCCTCTTTAGAAGTA 58.885 42.308 0.00 0.00 34.23 2.24
6051 11127 5.950549 TGGTACTGGTAGTCCTCTTTAGAAG 59.049 44.000 0.00 0.00 34.23 2.85
6052 11128 5.895807 TGGTACTGGTAGTCCTCTTTAGAA 58.104 41.667 0.00 0.00 34.23 2.10
6053 11129 5.252397 TCTGGTACTGGTAGTCCTCTTTAGA 59.748 44.000 0.00 0.00 34.23 2.10
6054 11130 5.507637 TCTGGTACTGGTAGTCCTCTTTAG 58.492 45.833 0.00 0.00 34.23 1.85
6086 11166 1.985473 TGCAACTTGAGAAGCCATGT 58.015 45.000 0.00 0.00 0.00 3.21
6182 11268 4.069304 CAGGTTGTGAAAATCCGGACTAA 58.931 43.478 6.12 0.00 0.00 2.24
6268 11360 0.457035 ATGCCATGACACATTTCGGC 59.543 50.000 0.00 0.00 40.02 5.54
6271 11363 5.925397 TGTTGTTTATGCCATGACACATTTC 59.075 36.000 0.00 0.00 0.00 2.17
6302 11394 2.086869 CTGAAAAGCCATGTCCGATGT 58.913 47.619 0.00 0.00 0.00 3.06
6304 11396 2.496899 ACTGAAAAGCCATGTCCGAT 57.503 45.000 0.00 0.00 0.00 4.18
6350 11442 7.840981 AATCGCGAAAATAAAAAGTAAACGT 57.159 28.000 15.24 0.00 0.00 3.99
6604 12058 7.591426 AGAAAATGTTCATCTCGTGCTTAAAAC 59.409 33.333 0.00 0.00 36.09 2.43
6614 12068 8.592155 TCGTGTATTTAGAAAATGTTCATCTCG 58.408 33.333 0.00 0.00 36.09 4.04
6777 12240 4.961438 AGGTTGACATGCTTTCCAAATT 57.039 36.364 0.00 0.00 0.00 1.82
6778 12241 4.961438 AAGGTTGACATGCTTTCCAAAT 57.039 36.364 0.00 0.00 0.00 2.32
6779 12242 4.751767 AAAGGTTGACATGCTTTCCAAA 57.248 36.364 0.00 0.00 0.00 3.28
6780 12243 4.751767 AAAAGGTTGACATGCTTTCCAA 57.248 36.364 0.00 0.00 0.00 3.53
6781 12244 4.751767 AAAAAGGTTGACATGCTTTCCA 57.248 36.364 0.00 0.00 0.00 3.53
6846 12309 5.885449 TTTTCCCAAAGGTTCATGTGAAT 57.115 34.783 0.00 0.00 36.33 2.57
6848 12311 5.835819 TGTATTTTCCCAAAGGTTCATGTGA 59.164 36.000 0.00 0.00 0.00 3.58
6849 12312 6.095432 TGTATTTTCCCAAAGGTTCATGTG 57.905 37.500 0.00 0.00 0.00 3.21
6850 12313 6.239572 CCTTGTATTTTCCCAAAGGTTCATGT 60.240 38.462 0.00 0.00 0.00 3.21
6851 12314 6.014669 TCCTTGTATTTTCCCAAAGGTTCATG 60.015 38.462 0.00 0.00 0.00 3.07
6949 12417 9.367444 CCTATATTGAGAAGTTTTTCGTGTACT 57.633 33.333 0.00 0.00 38.38 2.73
6950 12418 9.362539 TCCTATATTGAGAAGTTTTTCGTGTAC 57.637 33.333 0.00 0.00 38.38 2.90
6952 12420 8.883731 CATCCTATATTGAGAAGTTTTTCGTGT 58.116 33.333 0.00 0.00 38.38 4.49
6953 12421 9.098355 TCATCCTATATTGAGAAGTTTTTCGTG 57.902 33.333 0.00 0.00 38.38 4.35
6954 12422 9.667107 TTCATCCTATATTGAGAAGTTTTTCGT 57.333 29.630 0.00 0.00 38.38 3.85
6955 12423 9.922305 GTTCATCCTATATTGAGAAGTTTTTCG 57.078 33.333 0.00 0.00 38.38 3.46
6957 12425 9.981460 AGGTTCATCCTATATTGAGAAGTTTTT 57.019 29.630 0.00 0.00 46.10 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.