Multiple sequence alignment - TraesCS6A01G321700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G321700 chr6A 100.000 6227 0 0 1 6227 555973038 555979264 0.000000e+00 11500.0
1 TraesCS6A01G321700 chr6A 88.824 170 15 3 5657 5826 30451045 30451210 8.180000e-49 206.0
2 TraesCS6A01G321700 chr6A 97.260 73 2 0 3068 3140 555976034 555976106 2.360000e-24 124.0
3 TraesCS6A01G321700 chr6A 97.260 73 2 0 2997 3069 555976105 555976177 2.360000e-24 124.0
4 TraesCS6A01G321700 chr6A 97.059 34 1 0 407 440 80691982 80691949 2.420000e-04 58.4
5 TraesCS6A01G321700 chr6D 94.321 2976 125 23 2405 5363 411211898 411214846 0.000000e+00 4519.0
6 TraesCS6A01G321700 chr6D 91.238 1769 102 27 503 2247 411210161 411211900 0.000000e+00 2359.0
7 TraesCS6A01G321700 chr6D 95.666 323 9 5 1 323 411209617 411209934 1.200000e-141 514.0
8 TraesCS6A01G321700 chr6D 83.122 237 23 11 5597 5826 325421453 325421679 3.810000e-47 200.0
9 TraesCS6A01G321700 chr6D 85.526 152 13 5 356 505 411209936 411210080 3.890000e-32 150.0
10 TraesCS6A01G321700 chr6D 95.890 73 3 0 3068 3140 411212491 411212563 1.100000e-22 119.0
11 TraesCS6A01G321700 chr6D 93.151 73 5 0 2997 3069 411212562 411212634 2.370000e-19 108.0
12 TraesCS6A01G321700 chr6B 93.938 2095 76 12 2521 4579 618132661 618134740 0.000000e+00 3118.0
13 TraesCS6A01G321700 chr6B 90.666 1307 62 21 964 2245 618131158 618132429 0.000000e+00 1683.0
14 TraesCS6A01G321700 chr6B 91.244 788 50 7 4577 5363 618137127 618137896 0.000000e+00 1055.0
15 TraesCS6A01G321700 chr6B 86.765 544 45 13 414 956 618130450 618130967 1.160000e-161 580.0
16 TraesCS6A01G321700 chr6B 94.798 346 8 6 1 337 618130082 618130426 1.190000e-146 531.0
17 TraesCS6A01G321700 chr6B 85.177 479 51 12 5359 5826 618328314 618328783 2.030000e-129 473.0
18 TraesCS6A01G321700 chr6B 84.840 376 43 7 5852 6227 618140449 618140810 3.550000e-97 366.0
19 TraesCS6A01G321700 chr6B 97.414 116 3 0 2404 2519 618132430 618132545 1.370000e-46 198.0
20 TraesCS6A01G321700 chr6B 85.083 181 24 3 6048 6227 705942736 705942558 1.380000e-41 182.0
21 TraesCS6A01G321700 chr6B 84.397 141 9 3 5223 5363 618325978 618326105 6.550000e-25 126.0
22 TraesCS6A01G321700 chr6B 97.183 71 2 0 3070 3140 618133166 618133236 3.050000e-23 121.0
23 TraesCS6A01G321700 chr6B 90.667 75 5 2 2997 3069 618133235 618133309 1.430000e-16 99.0
24 TraesCS6A01G321700 chr7A 76.285 603 116 20 3595 4192 9203619 9203039 4.720000e-76 296.0
25 TraesCS6A01G321700 chr7A 77.559 508 81 17 3066 3570 9249314 9248837 6.150000e-70 276.0
26 TraesCS6A01G321700 chr7A 80.000 260 33 15 5602 5853 27866254 27866006 2.310000e-39 174.0
27 TraesCS6A01G321700 chr3D 94.382 178 8 2 2235 2412 238999406 238999581 7.950000e-69 272.0
28 TraesCS6A01G321700 chr3D 94.545 165 9 0 2242 2406 410670060 410670224 8.010000e-64 255.0
29 TraesCS6A01G321700 chr3D 83.333 216 23 10 5600 5809 602051062 602050854 2.960000e-43 187.0
30 TraesCS6A01G321700 chr4B 95.679 162 7 0 2245 2406 483266540 483266379 1.720000e-65 261.0
31 TraesCS6A01G321700 chr4B 93.567 171 11 0 2238 2408 63753834 63754004 8.010000e-64 255.0
32 TraesCS6A01G321700 chr1B 94.545 165 9 0 2242 2406 488539102 488538938 8.010000e-64 255.0
33 TraesCS6A01G321700 chr1B 80.377 265 31 14 5591 5847 60251709 60251458 1.380000e-41 182.0
34 TraesCS6A01G321700 chr4D 94.048 168 9 1 2242 2409 68663983 68663817 2.880000e-63 254.0
35 TraesCS6A01G321700 chr4D 97.059 34 1 0 407 440 454805128 454805161 2.420000e-04 58.4
36 TraesCS6A01G321700 chr1A 93.529 170 10 1 2240 2409 307400013 307400181 1.040000e-62 252.0
37 TraesCS6A01G321700 chr7B 92.090 177 14 0 2245 2421 561750774 561750598 3.730000e-62 250.0
38 TraesCS6A01G321700 chr7B 81.481 270 30 14 5592 5848 63125339 63125077 2.940000e-48 204.0
39 TraesCS6A01G321700 chr2D 91.525 177 15 0 2238 2414 521564024 521564200 1.730000e-60 244.0
40 TraesCS6A01G321700 chr2D 81.679 262 31 14 5602 5855 490678479 490678731 1.060000e-47 202.0
41 TraesCS6A01G321700 chr2D 100.000 29 0 0 407 435 18470202 18470230 3.000000e-03 54.7
42 TraesCS6A01G321700 chrUn 78.457 376 74 6 3820 4192 82327419 82327048 8.070000e-59 239.0
43 TraesCS6A01G321700 chrUn 78.457 376 74 6 3820 4192 82333643 82333272 8.070000e-59 239.0
44 TraesCS6A01G321700 chrUn 78.457 376 74 6 3820 4192 234380406 234380777 8.070000e-59 239.0
45 TraesCS6A01G321700 chrUn 78.457 376 74 6 3820 4192 327347233 327347604 8.070000e-59 239.0
46 TraesCS6A01G321700 chr7D 82.031 256 29 10 5597 5842 591222828 591222580 1.060000e-47 202.0
47 TraesCS6A01G321700 chr7D 84.444 90 10 1 479 564 561703086 561702997 1.110000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G321700 chr6A 555973038 555979264 6226 False 3916.000000 11500 98.173333 1 6227 3 chr6A.!!$F2 6226
1 TraesCS6A01G321700 chr6D 411209617 411214846 5229 False 1294.833333 4519 92.632000 1 5363 6 chr6D.!!$F2 5362
2 TraesCS6A01G321700 chr6B 618130082 618140810 10728 False 861.222222 3118 91.946111 1 6227 9 chr6B.!!$F1 6226
3 TraesCS6A01G321700 chr6B 618325978 618328783 2805 False 299.500000 473 84.787000 5223 5826 2 chr6B.!!$F2 603
4 TraesCS6A01G321700 chr7A 9203039 9203619 580 True 296.000000 296 76.285000 3595 4192 1 chr7A.!!$R1 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
332 342 0.456995 GTCGCTCTCCGGAACAAGAG 60.457 60.000 5.23 9.98 39.85 2.85 F
2068 2374 0.042448 GCCGTTTGACGTGTTCAGTC 60.042 55.000 0.00 0.00 40.58 3.51 F
2302 2617 0.031585 TCGCTATGGACCACATACGC 59.968 55.000 0.00 0.00 41.03 4.42 F
2303 2618 0.249280 CGCTATGGACCACATACGCA 60.249 55.000 0.00 0.00 41.03 5.24 F
3262 3721 1.443194 GTTCAACTGGCATGCGCTG 60.443 57.895 12.44 11.04 38.60 5.18 F
4665 7529 0.393402 CTGCTCTTGCTACATGGCCA 60.393 55.000 8.56 8.56 40.48 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2283 2598 0.031585 GCGTATGTGGTCCATAGCGA 59.968 55.000 15.93 0.0 36.71 4.93 R
3392 3851 0.606401 AGACTTTGGCACCACGGATG 60.606 55.000 0.00 0.0 0.00 3.51 R
3393 3852 0.606401 CAGACTTTGGCACCACGGAT 60.606 55.000 0.00 0.0 0.00 4.18 R
3394 3853 1.227823 CAGACTTTGGCACCACGGA 60.228 57.895 0.00 0.0 0.00 4.69 R
5132 7996 0.825010 CCTGCACCTCAACAAGCCTT 60.825 55.000 0.00 0.0 0.00 4.35 R
5984 11380 0.322187 AACCTACGGGTGCCAATGTC 60.322 55.000 0.00 0.0 46.67 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 136 2.203422 CCCCCTTGGTTGTTGCGA 60.203 61.111 0.00 0.00 0.00 5.10
146 154 2.224161 GCGAGTAGGCCTGAATTCTGAT 60.224 50.000 17.99 2.68 0.00 2.90
323 333 0.667487 TTTTCTGCTGTCGCTCTCCG 60.667 55.000 0.00 0.00 36.97 4.63
324 334 2.492449 TTTCTGCTGTCGCTCTCCGG 62.492 60.000 0.00 0.00 37.59 5.14
325 335 3.443925 CTGCTGTCGCTCTCCGGA 61.444 66.667 2.93 2.93 37.59 5.14
326 336 2.989253 TGCTGTCGCTCTCCGGAA 60.989 61.111 5.23 0.00 37.59 4.30
327 337 2.507324 GCTGTCGCTCTCCGGAAC 60.507 66.667 5.23 0.00 37.59 3.62
328 338 2.962569 CTGTCGCTCTCCGGAACA 59.037 61.111 5.23 5.58 37.59 3.18
329 339 1.289066 CTGTCGCTCTCCGGAACAA 59.711 57.895 5.23 0.00 37.59 2.83
330 340 0.734253 CTGTCGCTCTCCGGAACAAG 60.734 60.000 5.23 4.61 37.59 3.16
331 341 1.176619 TGTCGCTCTCCGGAACAAGA 61.177 55.000 5.23 0.00 37.59 3.02
332 342 0.456995 GTCGCTCTCCGGAACAAGAG 60.457 60.000 5.23 9.98 39.85 2.85
333 343 1.153745 CGCTCTCCGGAACAAGAGG 60.154 63.158 17.44 6.57 38.06 3.69
334 344 1.219393 GCTCTCCGGAACAAGAGGG 59.781 63.158 17.44 1.37 38.06 4.30
335 345 1.901085 CTCTCCGGAACAAGAGGGG 59.099 63.158 5.23 0.00 35.17 4.79
336 346 1.612442 TCTCCGGAACAAGAGGGGG 60.612 63.158 5.23 0.00 0.00 5.40
384 394 6.366332 GTGCTATGTATTTCTATGAAGGTCCG 59.634 42.308 0.00 0.00 0.00 4.79
391 401 5.943349 TTTCTATGAAGGTCCGGACATTA 57.057 39.130 32.45 20.69 35.27 1.90
392 402 5.943349 TTCTATGAAGGTCCGGACATTAA 57.057 39.130 32.45 26.79 35.27 1.40
393 403 5.272283 TCTATGAAGGTCCGGACATTAAC 57.728 43.478 32.45 21.70 35.27 2.01
394 404 2.373540 TGAAGGTCCGGACATTAACG 57.626 50.000 32.45 0.00 35.27 3.18
395 405 1.004595 GAAGGTCCGGACATTAACGC 58.995 55.000 32.45 17.43 35.27 4.84
397 407 1.477553 AGGTCCGGACATTAACGCTA 58.522 50.000 34.40 0.00 0.00 4.26
398 408 1.826720 AGGTCCGGACATTAACGCTAA 59.173 47.619 34.40 0.00 0.00 3.09
399 409 2.433239 AGGTCCGGACATTAACGCTAAT 59.567 45.455 34.40 3.73 0.00 1.73
401 411 3.450578 GTCCGGACATTAACGCTAATGA 58.549 45.455 29.75 0.03 44.99 2.57
402 412 3.244579 GTCCGGACATTAACGCTAATGAC 59.755 47.826 29.75 16.37 44.99 3.06
440 450 1.128692 CATGGAGCTCGGTTTCGAAAC 59.871 52.381 28.83 28.83 45.47 2.78
460 470 7.225734 TCGAAACATCATTTTCTACACACTGAA 59.774 33.333 0.00 0.00 33.93 3.02
678 773 2.494870 AGAGCAAACCATTCTGGCATTC 59.505 45.455 0.00 0.00 42.67 2.67
708 803 2.619013 ATGCGTGTTCTGCTAAAAGC 57.381 45.000 0.00 0.00 42.82 3.51
749 844 1.523938 GGCAATCCTCCACGTAGCC 60.524 63.158 0.00 0.00 0.00 3.93
765 860 2.280389 CCCCATCGATCCGCTGTG 60.280 66.667 0.00 0.00 0.00 3.66
777 872 1.517257 CGCTGTGATCTCACCGACC 60.517 63.158 6.64 0.00 45.88 4.79
778 873 1.591703 GCTGTGATCTCACCGACCA 59.408 57.895 7.81 0.00 45.88 4.02
842 937 2.551270 GCGTTGTCGGCAGTTCTG 59.449 61.111 0.00 0.00 37.56 3.02
936 1031 2.743718 CACCTTCACGCCTCCACT 59.256 61.111 0.00 0.00 0.00 4.00
937 1032 1.541310 CCACCTTCACGCCTCCACTA 61.541 60.000 0.00 0.00 0.00 2.74
945 1040 1.302033 CGCCTCCACTATCCATGCC 60.302 63.158 0.00 0.00 0.00 4.40
956 1051 0.769873 ATCCATGCCATCTCTCCACC 59.230 55.000 0.00 0.00 0.00 4.61
957 1052 1.150081 CCATGCCATCTCTCCACCC 59.850 63.158 0.00 0.00 0.00 4.61
958 1053 1.150081 CATGCCATCTCTCCACCCC 59.850 63.158 0.00 0.00 0.00 4.95
960 1055 2.692368 GCCATCTCTCCACCCCCA 60.692 66.667 0.00 0.00 0.00 4.96
961 1056 2.308722 GCCATCTCTCCACCCCCAA 61.309 63.158 0.00 0.00 0.00 4.12
962 1057 1.609783 CCATCTCTCCACCCCCAAC 59.390 63.158 0.00 0.00 0.00 3.77
998 1276 1.079888 CCCAACTTCCATTTGCGGC 60.080 57.895 0.00 0.00 0.00 6.53
1480 1766 1.875813 CCGCGATCTGACTCTGTGC 60.876 63.158 8.23 0.00 0.00 4.57
1637 1929 6.086319 GAATTGCAGAATTCGATGGTTTTG 57.914 37.500 0.00 0.00 38.50 2.44
1638 1930 4.582701 TTGCAGAATTCGATGGTTTTGT 57.417 36.364 0.00 0.00 0.00 2.83
1639 1931 4.159377 TGCAGAATTCGATGGTTTTGTC 57.841 40.909 0.00 0.00 0.00 3.18
1686 1978 3.764237 TGGCTTTACGATCTAATCCCC 57.236 47.619 0.00 0.00 0.00 4.81
1687 1979 3.042682 TGGCTTTACGATCTAATCCCCA 58.957 45.455 0.00 0.00 0.00 4.96
1690 1982 4.444449 GGCTTTACGATCTAATCCCCAAGT 60.444 45.833 0.00 0.00 0.00 3.16
1721 2014 0.386478 CAAAGGTGAAGAAGCTGCGC 60.386 55.000 0.00 0.00 36.51 6.09
1745 2038 0.320421 TTTTCGCACGGGAGGAGAAG 60.320 55.000 0.00 0.00 0.00 2.85
1855 2148 3.589988 CCATCCAGCAACGAGGTATATC 58.410 50.000 0.00 0.00 0.00 1.63
1894 2187 8.624701 TCGAATTAGTAATTGTAGTGTACTGC 57.375 34.615 12.86 0.00 30.81 4.40
1927 2220 2.399916 AGAATGAAGTGAGCTCCTGC 57.600 50.000 12.15 7.24 40.05 4.85
2000 2300 8.157476 ACTTGGACTTGTATGTTTATCTTGTCT 58.843 33.333 0.00 0.00 0.00 3.41
2001 2301 8.918202 TTGGACTTGTATGTTTATCTTGTCTT 57.082 30.769 0.00 0.00 0.00 3.01
2018 2318 2.415512 GTCTTGTTATTGGTCGACAGCC 59.584 50.000 18.91 0.00 0.00 4.85
2042 2343 1.135689 CACACACCGGCTATTTTCTGC 60.136 52.381 0.00 0.00 0.00 4.26
2060 2366 2.616330 CCAGCATGCCGTTTGACGT 61.616 57.895 15.66 0.00 40.58 4.34
2068 2374 0.042448 GCCGTTTGACGTGTTCAGTC 60.042 55.000 0.00 0.00 40.58 3.51
2069 2375 0.580104 CCGTTTGACGTGTTCAGTCC 59.420 55.000 0.00 0.00 40.58 3.85
2070 2376 1.282817 CGTTTGACGTGTTCAGTCCA 58.717 50.000 0.00 0.00 36.74 4.02
2071 2377 1.257936 CGTTTGACGTGTTCAGTCCAG 59.742 52.381 0.00 0.00 36.74 3.86
2072 2378 2.546778 GTTTGACGTGTTCAGTCCAGA 58.453 47.619 0.00 0.00 37.80 3.86
2105 2411 7.730332 TGAATAGCTTGTCTGGAGGATATCTAA 59.270 37.037 2.05 0.00 0.00 2.10
2188 2494 4.795268 CAAGCGTGAACTTCTGTAGTAGA 58.205 43.478 0.00 0.00 35.54 2.59
2190 2496 5.646577 AGCGTGAACTTCTGTAGTAGATT 57.353 39.130 0.00 0.00 35.54 2.40
2224 2539 8.781196 CACTGTTATAGTCTTAGATAGGCGTAA 58.219 37.037 0.00 0.00 37.60 3.18
2225 2540 9.517868 ACTGTTATAGTCTTAGATAGGCGTAAT 57.482 33.333 0.00 0.00 33.17 1.89
2231 2546 5.047847 GTCTTAGATAGGCGTAATGTTGCA 58.952 41.667 0.00 0.00 0.00 4.08
2245 2560 7.466725 GCGTAATGTTGCAGGATTTGAATACTA 60.467 37.037 0.00 0.00 0.00 1.82
2246 2561 7.850982 CGTAATGTTGCAGGATTTGAATACTAC 59.149 37.037 0.00 0.00 0.00 2.73
2247 2562 7.944729 AATGTTGCAGGATTTGAATACTACT 57.055 32.000 0.00 0.00 0.00 2.57
2248 2563 6.985188 TGTTGCAGGATTTGAATACTACTC 57.015 37.500 0.00 0.00 0.00 2.59
2249 2564 5.880332 TGTTGCAGGATTTGAATACTACTCC 59.120 40.000 0.00 0.00 0.00 3.85
2250 2565 5.036117 TGCAGGATTTGAATACTACTCCC 57.964 43.478 0.00 0.00 0.00 4.30
2251 2566 4.721776 TGCAGGATTTGAATACTACTCCCT 59.278 41.667 0.00 0.00 0.00 4.20
2252 2567 5.163301 TGCAGGATTTGAATACTACTCCCTC 60.163 44.000 0.00 0.00 0.00 4.30
2253 2568 5.743422 GCAGGATTTGAATACTACTCCCTCC 60.743 48.000 0.00 0.00 0.00 4.30
2254 2569 4.589374 AGGATTTGAATACTACTCCCTCCG 59.411 45.833 0.00 0.00 0.00 4.63
2255 2570 4.344390 GGATTTGAATACTACTCCCTCCGT 59.656 45.833 0.00 0.00 0.00 4.69
2256 2571 5.163332 GGATTTGAATACTACTCCCTCCGTT 60.163 44.000 0.00 0.00 0.00 4.44
2257 2572 4.996788 TTGAATACTACTCCCTCCGTTC 57.003 45.455 0.00 0.00 0.00 3.95
2258 2573 3.294214 TGAATACTACTCCCTCCGTTCC 58.706 50.000 0.00 0.00 0.00 3.62
2259 2574 3.053095 TGAATACTACTCCCTCCGTTCCT 60.053 47.826 0.00 0.00 0.00 3.36
2260 2575 4.166725 TGAATACTACTCCCTCCGTTCCTA 59.833 45.833 0.00 0.00 0.00 2.94
2261 2576 4.803329 ATACTACTCCCTCCGTTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
2262 2577 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2263 2578 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2264 2579 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2265 2580 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2266 2581 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
2267 2582 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
2268 2583 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2269 2584 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2270 2585 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2271 2586 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2272 2587 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2273 2588 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2274 2589 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
2275 2590 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
2290 2605 7.763172 AAGTCTTTGTAGAGATTTCGCTATG 57.237 36.000 0.00 0.00 31.23 2.23
2291 2606 6.276847 AGTCTTTGTAGAGATTTCGCTATGG 58.723 40.000 0.00 0.00 31.23 2.74
2292 2607 6.096987 AGTCTTTGTAGAGATTTCGCTATGGA 59.903 38.462 0.00 0.00 31.23 3.41
2293 2608 6.199342 GTCTTTGTAGAGATTTCGCTATGGAC 59.801 42.308 0.00 0.00 31.23 4.02
2294 2609 4.585955 TGTAGAGATTTCGCTATGGACC 57.414 45.455 0.00 0.00 31.23 4.46
2295 2610 3.958147 TGTAGAGATTTCGCTATGGACCA 59.042 43.478 0.00 0.00 31.23 4.02
2296 2611 3.460857 AGAGATTTCGCTATGGACCAC 57.539 47.619 0.00 0.00 0.00 4.16
2297 2612 2.766263 AGAGATTTCGCTATGGACCACA 59.234 45.455 0.00 0.00 0.00 4.17
2298 2613 3.389329 AGAGATTTCGCTATGGACCACAT 59.611 43.478 0.00 0.00 43.68 3.21
2299 2614 4.588951 AGAGATTTCGCTATGGACCACATA 59.411 41.667 0.00 0.00 41.03 2.29
2300 2615 4.632153 AGATTTCGCTATGGACCACATAC 58.368 43.478 0.00 0.00 41.03 2.39
2301 2616 2.502213 TTCGCTATGGACCACATACG 57.498 50.000 0.00 0.00 41.03 3.06
2302 2617 0.031585 TCGCTATGGACCACATACGC 59.968 55.000 0.00 0.00 41.03 4.42
2303 2618 0.249280 CGCTATGGACCACATACGCA 60.249 55.000 0.00 0.00 41.03 5.24
2304 2619 1.605457 CGCTATGGACCACATACGCAT 60.605 52.381 0.00 0.00 41.03 4.73
2305 2620 1.800586 GCTATGGACCACATACGCATG 59.199 52.381 0.00 0.00 41.03 4.06
2306 2621 2.806745 GCTATGGACCACATACGCATGT 60.807 50.000 0.00 0.00 46.58 3.21
2307 2622 3.554129 GCTATGGACCACATACGCATGTA 60.554 47.826 0.00 0.00 43.73 2.29
2308 2623 3.769739 ATGGACCACATACGCATGTAT 57.230 42.857 0.00 0.00 43.73 2.29
2309 2624 4.882842 ATGGACCACATACGCATGTATA 57.117 40.909 0.00 0.00 43.73 1.47
2310 2625 4.882842 TGGACCACATACGCATGTATAT 57.117 40.909 0.00 0.00 43.73 0.86
2311 2626 5.986501 TGGACCACATACGCATGTATATA 57.013 39.130 0.00 0.00 43.73 0.86
2312 2627 5.961272 TGGACCACATACGCATGTATATAG 58.039 41.667 0.00 0.00 43.73 1.31
2313 2628 5.712917 TGGACCACATACGCATGTATATAGA 59.287 40.000 0.00 0.00 43.73 1.98
2314 2629 6.379988 TGGACCACATACGCATGTATATAGAT 59.620 38.462 0.00 0.00 43.73 1.98
2315 2630 6.697455 GGACCACATACGCATGTATATAGATG 59.303 42.308 14.11 14.11 43.73 2.90
2316 2631 6.042777 ACCACATACGCATGTATATAGATGC 58.957 40.000 27.02 27.02 43.73 3.91
2336 2651 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
2347 2662 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2348 2663 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
2349 2664 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
2350 2665 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
2351 2666 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
2352 2667 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
2353 2668 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
2354 2669 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
2355 2670 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
2356 2671 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
2357 2672 5.582269 TCACTCATTTTGCTCTGTATGTAGC 59.418 40.000 0.00 0.00 39.25 3.58
2358 2673 4.878397 ACTCATTTTGCTCTGTATGTAGCC 59.122 41.667 0.00 0.00 37.97 3.93
2359 2674 4.199310 TCATTTTGCTCTGTATGTAGCCC 58.801 43.478 0.00 0.00 37.97 5.19
2360 2675 3.712016 TTTTGCTCTGTATGTAGCCCA 57.288 42.857 0.00 0.00 37.97 5.36
2361 2676 3.931907 TTTGCTCTGTATGTAGCCCAT 57.068 42.857 0.00 0.00 37.97 4.00
2362 2677 5.366482 TTTTGCTCTGTATGTAGCCCATA 57.634 39.130 0.00 0.00 37.97 2.74
2363 2678 4.607293 TTGCTCTGTATGTAGCCCATAG 57.393 45.455 0.00 0.00 36.71 2.23
2364 2679 3.576861 TGCTCTGTATGTAGCCCATAGT 58.423 45.455 0.00 0.00 36.71 2.12
2365 2680 3.321968 TGCTCTGTATGTAGCCCATAGTG 59.678 47.826 0.00 0.00 36.71 2.74
2366 2681 3.306364 GCTCTGTATGTAGCCCATAGTGG 60.306 52.174 0.00 0.00 36.71 4.00
2367 2682 4.152647 CTCTGTATGTAGCCCATAGTGGA 58.847 47.826 0.00 0.00 40.96 4.02
2368 2683 4.552674 TCTGTATGTAGCCCATAGTGGAA 58.447 43.478 0.00 0.00 40.96 3.53
2369 2684 5.155161 TCTGTATGTAGCCCATAGTGGAAT 58.845 41.667 0.00 0.00 40.96 3.01
2370 2685 5.246203 TCTGTATGTAGCCCATAGTGGAATC 59.754 44.000 0.00 0.00 40.96 2.52
2371 2686 5.155161 TGTATGTAGCCCATAGTGGAATCT 58.845 41.667 0.00 0.00 40.96 2.40
2372 2687 4.899352 ATGTAGCCCATAGTGGAATCTC 57.101 45.455 0.00 0.00 40.96 2.75
2373 2688 3.928754 TGTAGCCCATAGTGGAATCTCT 58.071 45.455 0.00 0.00 40.96 3.10
2374 2689 5.074746 TGTAGCCCATAGTGGAATCTCTA 57.925 43.478 0.00 0.00 40.96 2.43
2375 2690 4.833380 TGTAGCCCATAGTGGAATCTCTAC 59.167 45.833 0.00 0.00 40.96 2.59
2376 2691 3.928754 AGCCCATAGTGGAATCTCTACA 58.071 45.455 0.00 0.00 40.96 2.74
2377 2692 4.298626 AGCCCATAGTGGAATCTCTACAA 58.701 43.478 0.00 0.00 40.96 2.41
2378 2693 4.721776 AGCCCATAGTGGAATCTCTACAAA 59.278 41.667 0.00 0.00 40.96 2.83
2379 2694 5.059833 GCCCATAGTGGAATCTCTACAAAG 58.940 45.833 0.00 0.00 40.96 2.77
2380 2695 5.163301 GCCCATAGTGGAATCTCTACAAAGA 60.163 44.000 0.00 0.00 40.96 2.52
2381 2696 6.284459 CCCATAGTGGAATCTCTACAAAGAC 58.716 44.000 0.00 0.00 40.96 3.01
2382 2697 6.098982 CCCATAGTGGAATCTCTACAAAGACT 59.901 42.308 0.00 0.00 40.96 3.24
2383 2698 7.365117 CCCATAGTGGAATCTCTACAAAGACTT 60.365 40.741 0.00 0.00 40.96 3.01
2384 2699 7.493971 CCATAGTGGAATCTCTACAAAGACTTG 59.506 40.741 0.00 0.00 40.96 3.16
2386 2701 7.540474 AGTGGAATCTCTACAAAGACTTGTA 57.460 36.000 0.00 0.00 44.14 2.41
2387 2702 8.140112 AGTGGAATCTCTACAAAGACTTGTAT 57.860 34.615 0.00 0.00 44.95 2.29
2388 2703 8.598041 AGTGGAATCTCTACAAAGACTTGTATT 58.402 33.333 0.00 0.00 44.95 1.89
2389 2704 9.220767 GTGGAATCTCTACAAAGACTTGTATTT 57.779 33.333 0.00 0.00 44.95 1.40
2395 2710 9.924650 TCTCTACAAAGACTTGTATTTAGGAAC 57.075 33.333 0.00 0.00 44.95 3.62
2396 2711 9.930693 CTCTACAAAGACTTGTATTTAGGAACT 57.069 33.333 0.00 0.00 44.95 3.01
2397 2712 9.706691 TCTACAAAGACTTGTATTTAGGAACTG 57.293 33.333 0.00 0.00 44.95 3.16
2398 2713 9.706691 CTACAAAGACTTGTATTTAGGAACTGA 57.293 33.333 0.00 0.00 44.95 3.41
2399 2714 8.608844 ACAAAGACTTGTATTTAGGAACTGAG 57.391 34.615 0.00 0.00 44.14 3.35
2400 2715 7.661847 ACAAAGACTTGTATTTAGGAACTGAGG 59.338 37.037 0.00 0.00 44.14 3.86
2401 2716 6.301169 AGACTTGTATTTAGGAACTGAGGG 57.699 41.667 0.00 0.00 41.52 4.30
2402 2717 6.023603 AGACTTGTATTTAGGAACTGAGGGA 58.976 40.000 0.00 0.00 41.52 4.20
2449 2764 1.740025 GATCAGGAAAAGCAACCCTCG 59.260 52.381 0.00 0.00 0.00 4.63
2566 2995 4.096382 CCAATTGGTGTATCAACCTAGCAC 59.904 45.833 16.90 0.00 41.16 4.40
2624 3053 3.368323 GCATATTGGTTGACCTGTTTGGG 60.368 47.826 1.34 0.00 41.11 4.12
2679 3135 4.546674 TGTCTCCTTGATGGTATCAGCTA 58.453 43.478 0.00 0.00 40.94 3.32
2719 3175 7.656707 ATTTTGTTCCATTTATGTTCTGTGC 57.343 32.000 0.00 0.00 0.00 4.57
2720 3176 5.781210 TTGTTCCATTTATGTTCTGTGCA 57.219 34.783 0.00 0.00 0.00 4.57
2736 3192 8.343366 TGTTCTGTGCAACGTTATAAATTAACA 58.657 29.630 0.00 4.44 42.39 2.41
2818 3274 9.542462 TCTGGATTTATTTTACATCGGTTAGAG 57.458 33.333 0.00 0.00 0.00 2.43
2926 3383 2.350522 GAATCATGGCGTGTTGAGACT 58.649 47.619 6.60 0.00 0.00 3.24
2935 3392 4.056050 GGCGTGTTGAGACTCTAAAAGAA 58.944 43.478 3.68 0.00 0.00 2.52
3156 3615 4.213482 GGTACATATTGGGCGCTTCTAAAG 59.787 45.833 7.64 0.00 0.00 1.85
3158 3617 3.214328 CATATTGGGCGCTTCTAAAGGT 58.786 45.455 7.64 0.00 0.00 3.50
3163 3622 2.035321 TGGGCGCTTCTAAAGGTTTTTG 59.965 45.455 7.64 0.00 0.00 2.44
3172 3631 8.108172 CGCTTCTAAAGGTTTTTGTTTTTCTTC 58.892 33.333 0.00 0.00 0.00 2.87
3262 3721 1.443194 GTTCAACTGGCATGCGCTG 60.443 57.895 12.44 11.04 38.60 5.18
3296 3755 4.541705 TGGTCTTTGGATTTCACCAGAAA 58.458 39.130 0.00 0.00 46.90 2.52
3368 3827 4.884164 GCTTCTCTACCATTGCCTATGTTT 59.116 41.667 0.00 0.00 31.99 2.83
3389 3848 8.347004 TGTTTATTATGTTTCATGAAGCTCCA 57.653 30.769 21.00 11.46 0.00 3.86
3390 3849 8.970020 TGTTTATTATGTTTCATGAAGCTCCAT 58.030 29.630 21.00 16.49 0.00 3.41
3391 3850 9.241317 GTTTATTATGTTTCATGAAGCTCCATG 57.759 33.333 21.00 6.59 43.88 3.66
3392 3851 3.795623 ATGTTTCATGAAGCTCCATGC 57.204 42.857 21.00 0.00 42.63 4.06
3393 3852 2.516906 TGTTTCATGAAGCTCCATGCA 58.483 42.857 21.00 0.00 45.94 3.96
3394 3853 3.093814 TGTTTCATGAAGCTCCATGCAT 58.906 40.909 21.00 0.00 45.94 3.96
3395 3854 3.129813 TGTTTCATGAAGCTCCATGCATC 59.870 43.478 21.00 0.00 45.94 3.91
3423 3882 1.270550 CCAAAGTCTGACCCATTGTGC 59.729 52.381 3.76 0.00 0.00 4.57
3461 3920 9.647797 TTACAGAATAGCTTTCGTATTTCTCAA 57.352 29.630 0.00 0.00 0.00 3.02
3580 4039 2.827642 GCTGCTGTGAGATGGGGC 60.828 66.667 0.00 0.00 0.00 5.80
3652 4111 3.425422 GCTAGGAATGCCAAGCCG 58.575 61.111 0.00 0.00 36.29 5.52
3852 4314 2.004583 TCGGAGCGGTGTTAGAATTG 57.995 50.000 0.00 0.00 0.00 2.32
4063 4528 0.981277 ACTGTACGGGAATGGGGAGG 60.981 60.000 6.65 0.00 0.00 4.30
4176 4642 6.032094 GTGATGCAACAATCCTGTTCTAATG 58.968 40.000 0.00 0.00 44.15 1.90
4462 4935 2.514803 GTGTATGGTTGCACCTTTCCT 58.485 47.619 6.83 0.00 39.58 3.36
4463 4936 2.488153 GTGTATGGTTGCACCTTTCCTC 59.512 50.000 6.83 0.00 39.58 3.71
4503 4976 8.800370 TGATACTGATTGCTTTATGTTTACCA 57.200 30.769 0.00 0.00 0.00 3.25
4511 4984 6.701145 TGCTTTATGTTTACCAACTGTCAA 57.299 33.333 0.00 0.00 33.58 3.18
4519 4992 7.022055 TGTTTACCAACTGTCAATGTACAAG 57.978 36.000 0.00 0.00 33.58 3.16
4557 5030 2.969821 TGGTAACAGCCATTTGTCCT 57.030 45.000 0.00 0.00 46.17 3.85
4591 7453 5.591099 ACTGGTTGTAATTTCTTGCTGTTG 58.409 37.500 0.00 0.00 0.00 3.33
4618 7481 1.270550 CAAGTCTGGTTTGTGGCCATC 59.729 52.381 9.72 3.12 35.19 3.51
4641 7504 3.438781 TGATTGTTTGGAGTATGGTTCGC 59.561 43.478 0.00 0.00 0.00 4.70
4665 7529 0.393402 CTGCTCTTGCTACATGGCCA 60.393 55.000 8.56 8.56 40.48 5.36
4676 7540 1.767759 ACATGGCCAGGCAAATACTC 58.232 50.000 19.26 0.00 0.00 2.59
4728 7592 2.226330 GCCAATGTTGACCTACACACA 58.774 47.619 0.00 0.00 0.00 3.72
4739 7603 2.949644 ACCTACACACAAGGCTTTGTTC 59.050 45.455 12.08 0.00 45.01 3.18
4819 7683 8.853077 TGATTTTCTGTTAAGATGACATGAGT 57.147 30.769 0.00 0.00 30.72 3.41
4828 7692 8.506437 TGTTAAGATGACATGAGTTGTTGATTC 58.494 33.333 0.00 0.00 39.18 2.52
4838 7702 7.500227 ACATGAGTTGTTGATTCTTCTTCTTCA 59.500 33.333 0.00 0.00 33.74 3.02
4842 7706 5.657470 TGTTGATTCTTCTTCTTCACACG 57.343 39.130 0.00 0.00 0.00 4.49
4844 7708 3.664107 TGATTCTTCTTCTTCACACGGG 58.336 45.455 0.00 0.00 0.00 5.28
4857 7721 3.202906 TCACACGGGCTAATTATCTTGC 58.797 45.455 0.00 0.00 0.00 4.01
4941 7805 2.123251 TCTCATCCGAGAGCCCCC 60.123 66.667 0.00 0.00 43.55 5.40
5016 7880 1.081892 CTGGGAGATTTGCACTGACG 58.918 55.000 0.00 0.00 0.00 4.35
5021 7885 1.464997 GAGATTTGCACTGACGAACCC 59.535 52.381 0.00 0.00 0.00 4.11
5054 7918 2.571212 TCTTTCATTTGCCACGACACT 58.429 42.857 0.00 0.00 0.00 3.55
5209 8073 2.045926 ATTCAGCTCACGGCCACC 60.046 61.111 2.24 0.00 43.05 4.61
5210 8074 2.527951 GATTCAGCTCACGGCCACCT 62.528 60.000 2.24 0.00 43.05 4.00
5284 8154 3.245052 ACCAAGCTCCTGTGCTATTTTCT 60.245 43.478 0.00 0.00 43.24 2.52
5286 8156 4.219288 CCAAGCTCCTGTGCTATTTTCTTT 59.781 41.667 0.00 0.00 43.24 2.52
5287 8157 5.397326 CAAGCTCCTGTGCTATTTTCTTTC 58.603 41.667 0.00 0.00 43.24 2.62
5289 8159 5.259632 AGCTCCTGTGCTATTTTCTTTCAT 58.740 37.500 0.00 0.00 42.10 2.57
5290 8160 5.125097 AGCTCCTGTGCTATTTTCTTTCATG 59.875 40.000 0.00 0.00 42.10 3.07
5291 8161 5.105997 GCTCCTGTGCTATTTTCTTTCATGT 60.106 40.000 0.00 0.00 0.00 3.21
5292 8162 6.094048 GCTCCTGTGCTATTTTCTTTCATGTA 59.906 38.462 0.00 0.00 0.00 2.29
5293 8163 7.362056 GCTCCTGTGCTATTTTCTTTCATGTAA 60.362 37.037 0.00 0.00 0.00 2.41
5294 8164 8.402798 TCCTGTGCTATTTTCTTTCATGTAAA 57.597 30.769 0.00 0.00 0.00 2.01
5296 8166 9.132521 CCTGTGCTATTTTCTTTCATGTAAAAG 57.867 33.333 1.36 1.36 37.55 2.27
5297 8167 9.683069 CTGTGCTATTTTCTTTCATGTAAAAGT 57.317 29.630 6.74 0.00 37.49 2.66
5298 8168 9.462174 TGTGCTATTTTCTTTCATGTAAAAGTG 57.538 29.630 6.74 3.24 37.49 3.16
5299 8169 8.427774 GTGCTATTTTCTTTCATGTAAAAGTGC 58.572 33.333 6.74 10.22 37.49 4.40
5300 8170 8.140628 TGCTATTTTCTTTCATGTAAAAGTGCA 58.859 29.630 6.74 11.86 37.49 4.57
5301 8171 9.143631 GCTATTTTCTTTCATGTAAAAGTGCAT 57.856 29.630 6.74 1.92 37.49 3.96
5304 8174 8.715191 TTTTCTTTCATGTAAAAGTGCATTGT 57.285 26.923 6.74 0.00 37.49 2.71
5305 8175 7.928908 TTCTTTCATGTAAAAGTGCATTGTC 57.071 32.000 6.74 0.00 37.49 3.18
5306 8176 7.036996 TCTTTCATGTAAAAGTGCATTGTCA 57.963 32.000 6.74 0.00 37.49 3.58
5307 8177 6.917477 TCTTTCATGTAAAAGTGCATTGTCAC 59.083 34.615 6.74 3.86 37.49 3.67
5336 8206 5.436175 CAGTCACATATGAACATGGGGTTA 58.564 41.667 10.38 0.00 40.63 2.85
5342 8212 3.713826 ATGAACATGGGGTTACGAGTT 57.286 42.857 0.00 0.00 40.63 3.01
5363 10692 7.435068 AGTTCACACACGAAAGCTATAAAAT 57.565 32.000 0.00 0.00 0.00 1.82
5367 10696 7.302524 TCACACACGAAAGCTATAAAATTTCC 58.697 34.615 0.00 0.00 30.79 3.13
5375 10704 6.449635 AAGCTATAAAATTTCCGTGCATGA 57.550 33.333 7.72 0.00 0.00 3.07
5376 10705 5.821204 AGCTATAAAATTTCCGTGCATGAC 58.179 37.500 7.72 0.00 0.00 3.06
5396 10725 1.134877 CATCCTCTCATGACACGCTGT 60.135 52.381 0.00 0.00 0.00 4.40
5432 10761 3.435186 GGGCCTCTGCTTTCGCAC 61.435 66.667 0.84 0.00 42.25 5.34
5444 10773 0.250684 TTTCGCACCAGAAGCATGGA 60.251 50.000 9.37 0.00 43.57 3.41
5469 10798 0.981183 TTATCCCCTCAACACACGCT 59.019 50.000 0.00 0.00 0.00 5.07
5475 10804 0.304705 CCTCAACACACGCTGACAAC 59.695 55.000 0.00 0.00 0.00 3.32
5494 10823 5.185454 ACAACATAGAAATCGAATGGAGCA 58.815 37.500 0.00 0.00 0.00 4.26
5501 10830 1.661341 ATCGAATGGAGCACTGCTTC 58.339 50.000 4.67 3.22 39.88 3.86
5502 10831 0.737367 TCGAATGGAGCACTGCTTCG 60.737 55.000 14.17 14.17 39.88 3.79
5503 10832 1.016130 CGAATGGAGCACTGCTTCGT 61.016 55.000 4.67 0.81 39.88 3.85
5504 10833 0.723981 GAATGGAGCACTGCTTCGTC 59.276 55.000 4.67 1.08 39.88 4.20
5505 10834 0.322975 AATGGAGCACTGCTTCGTCT 59.677 50.000 4.67 0.00 39.88 4.18
5515 10849 3.670991 CACTGCTTCGTCTAGTGAGTTTC 59.329 47.826 0.00 0.00 43.35 2.78
5521 10855 4.564782 TCGTCTAGTGAGTTTCTCCCTA 57.435 45.455 0.00 0.00 0.00 3.53
5522 10856 4.914983 TCGTCTAGTGAGTTTCTCCCTAA 58.085 43.478 0.00 0.00 0.00 2.69
5523 10857 5.319453 TCGTCTAGTGAGTTTCTCCCTAAA 58.681 41.667 0.00 0.00 0.00 1.85
5530 10864 6.468543 AGTGAGTTTCTCCCTAAATTCTCAC 58.531 40.000 12.18 12.18 45.84 3.51
5532 10866 6.370166 GTGAGTTTCTCCCTAAATTCTCACAG 59.630 42.308 14.33 0.00 45.25 3.66
5557 10891 0.881796 CGCCTTCTTTTGGGGAGAAC 59.118 55.000 0.00 0.00 39.53 3.01
5558 10892 1.817740 CGCCTTCTTTTGGGGAGAACA 60.818 52.381 0.00 0.00 39.53 3.18
5590 10924 6.226052 ACTCTTTTCTGGAAATCCAATTTGC 58.774 36.000 3.35 0.00 46.97 3.68
5595 10929 4.355549 TCTGGAAATCCAATTTGCCTCAT 58.644 39.130 3.35 0.00 46.97 2.90
5609 10943 2.295629 TGCCTCATGCGTGAAAAATGAA 59.704 40.909 10.41 0.00 45.60 2.57
5614 10948 6.301108 CCTCATGCGTGAAAAATGAATTTTG 58.699 36.000 10.41 0.00 41.27 2.44
5639 10974 9.515020 TGTAATGTCAAAAGAAATCTCAACAAC 57.485 29.630 0.00 0.00 0.00 3.32
5640 10975 9.515020 GTAATGTCAAAAGAAATCTCAACAACA 57.485 29.630 0.00 0.00 0.00 3.33
5671 11015 8.766994 ATGTATTAACATCCAAATGCTACCTT 57.233 30.769 0.00 0.00 42.92 3.50
5685 11029 4.465886 TGCTACCTTCAAAGTTTTAGGCA 58.534 39.130 11.72 4.12 0.00 4.75
5784 11128 2.254546 TGACGAAACACCATTGCTCT 57.745 45.000 0.00 0.00 0.00 4.09
5789 11133 3.243068 ACGAAACACCATTGCTCTGTTTC 60.243 43.478 15.79 15.79 45.41 2.78
5791 11135 1.967319 ACACCATTGCTCTGTTTCGT 58.033 45.000 0.00 0.00 0.00 3.85
5803 11147 6.370593 TGCTCTGTTTCGTATGAAAATTGTC 58.629 36.000 11.66 0.43 45.22 3.18
5808 11152 6.499172 TGTTTCGTATGAAAATTGTCAAGCA 58.501 32.000 11.66 0.31 45.22 3.91
5826 11170 1.069296 GCATGCTTGCGACACTAACAA 60.069 47.619 11.37 0.00 39.49 2.83
5827 11171 2.604373 GCATGCTTGCGACACTAACAAA 60.604 45.455 11.37 0.00 39.49 2.83
5834 11178 4.884458 TGCGACACTAACAAAAACATCA 57.116 36.364 0.00 0.00 0.00 3.07
5836 11180 5.641709 TGCGACACTAACAAAAACATCAAA 58.358 33.333 0.00 0.00 0.00 2.69
5838 11182 6.754209 TGCGACACTAACAAAAACATCAAAAT 59.246 30.769 0.00 0.00 0.00 1.82
5874 11270 1.599797 CTTCCGGGAGCCAAAACGT 60.600 57.895 0.00 0.00 0.00 3.99
5875 11271 1.574702 CTTCCGGGAGCCAAAACGTC 61.575 60.000 0.00 0.00 0.00 4.34
5877 11273 2.032071 CGGGAGCCAAAACGTCCT 59.968 61.111 0.00 0.00 0.00 3.85
5879 11275 1.375326 GGGAGCCAAAACGTCCTCT 59.625 57.895 0.00 0.00 0.00 3.69
5880 11276 0.250770 GGGAGCCAAAACGTCCTCTT 60.251 55.000 0.00 0.00 0.00 2.85
5882 11278 1.157585 GAGCCAAAACGTCCTCTTCC 58.842 55.000 0.00 0.00 0.00 3.46
5884 11280 0.591659 GCCAAAACGTCCTCTTCCAC 59.408 55.000 0.00 0.00 0.00 4.02
5885 11281 1.814248 GCCAAAACGTCCTCTTCCACT 60.814 52.381 0.00 0.00 0.00 4.00
5886 11282 2.549349 GCCAAAACGTCCTCTTCCACTA 60.549 50.000 0.00 0.00 0.00 2.74
5887 11283 3.868754 GCCAAAACGTCCTCTTCCACTAT 60.869 47.826 0.00 0.00 0.00 2.12
5888 11284 4.324267 CCAAAACGTCCTCTTCCACTATT 58.676 43.478 0.00 0.00 0.00 1.73
5889 11285 4.760204 CCAAAACGTCCTCTTCCACTATTT 59.240 41.667 0.00 0.00 0.00 1.40
5890 11286 5.334879 CCAAAACGTCCTCTTCCACTATTTG 60.335 44.000 0.00 0.00 0.00 2.32
5891 11287 2.973945 ACGTCCTCTTCCACTATTTGC 58.026 47.619 0.00 0.00 0.00 3.68
5892 11288 2.280628 CGTCCTCTTCCACTATTTGCC 58.719 52.381 0.00 0.00 0.00 4.52
5909 11305 1.283029 TGCCCATTTTCTCTCTCAGGG 59.717 52.381 0.00 0.00 37.87 4.45
5928 11324 1.133915 GGGCCTTATCGGGTTCAATGA 60.134 52.381 0.84 0.00 0.00 2.57
5932 11328 3.181458 GCCTTATCGGGTTCAATGACCTA 60.181 47.826 2.80 0.00 39.71 3.08
5960 11356 7.775093 TCTTGCATAGATAAACACTTTATGCCT 59.225 33.333 11.03 0.00 43.57 4.75
5961 11357 7.880160 TGCATAGATAAACACTTTATGCCTT 57.120 32.000 11.03 0.00 43.57 4.35
5962 11358 7.706159 TGCATAGATAAACACTTTATGCCTTG 58.294 34.615 11.03 0.00 43.57 3.61
5963 11359 6.638468 GCATAGATAAACACTTTATGCCTTGC 59.362 38.462 3.97 0.00 40.23 4.01
5965 11361 6.840780 AGATAAACACTTTATGCCTTGCTT 57.159 33.333 0.00 0.00 36.04 3.91
5968 11364 1.812571 ACACTTTATGCCTTGCTTCCG 59.187 47.619 0.00 0.00 0.00 4.30
5969 11365 0.811281 ACTTTATGCCTTGCTTCCGC 59.189 50.000 0.00 0.00 0.00 5.54
5984 11380 0.521291 TCCGCGCAAAATTTCCTCAG 59.479 50.000 8.75 0.00 0.00 3.35
5996 11392 0.038166 TTCCTCAGACATTGGCACCC 59.962 55.000 0.00 0.00 0.00 4.61
6000 11396 0.249120 TCAGACATTGGCACCCGTAG 59.751 55.000 0.00 0.00 0.00 3.51
6025 11421 1.267261 CTTTCTCCGTCGAGACACACT 59.733 52.381 4.02 0.00 45.01 3.55
6037 11433 1.486310 AGACACACTGAAGACCAAGCA 59.514 47.619 0.00 0.00 0.00 3.91
6057 11453 4.082895 AGCATCACAAGATCAGAAAAGTGC 60.083 41.667 0.00 0.00 30.20 4.40
6062 11458 4.701651 CACAAGATCAGAAAAGTGCCCATA 59.298 41.667 0.00 0.00 0.00 2.74
6067 11463 4.640771 TCAGAAAAGTGCCCATAAGACT 57.359 40.909 0.00 0.00 0.00 3.24
6070 11466 4.154918 CAGAAAAGTGCCCATAAGACTCAC 59.845 45.833 0.00 0.00 0.00 3.51
6104 11500 0.446222 CTCATGGCAACGTAAACGGG 59.554 55.000 7.50 0.00 44.95 5.28
6107 11503 0.250381 ATGGCAACGTAAACGGGTGA 60.250 50.000 7.50 0.00 44.95 4.02
6111 11507 2.067766 GCAACGTAAACGGGTGACATA 58.932 47.619 7.50 0.00 44.95 2.29
6112 11508 2.674357 GCAACGTAAACGGGTGACATAT 59.326 45.455 7.50 0.00 44.95 1.78
6113 11509 3.484557 GCAACGTAAACGGGTGACATATG 60.485 47.826 7.50 0.00 44.95 1.78
6114 11510 3.872511 ACGTAAACGGGTGACATATGA 57.127 42.857 10.38 0.00 44.95 2.15
6115 11511 4.395959 ACGTAAACGGGTGACATATGAT 57.604 40.909 10.38 0.00 44.95 2.45
6116 11512 4.761975 ACGTAAACGGGTGACATATGATT 58.238 39.130 10.38 0.00 44.95 2.57
6117 11513 5.180271 ACGTAAACGGGTGACATATGATTT 58.820 37.500 10.38 1.46 44.95 2.17
6118 11514 6.339730 ACGTAAACGGGTGACATATGATTTA 58.660 36.000 10.38 0.61 44.95 1.40
6125 11521 9.436957 AACGGGTGACATATGATTTATATCTTC 57.563 33.333 10.38 0.00 29.37 2.87
6127 11523 9.091784 CGGGTGACATATGATTTATATCTTCAG 57.908 37.037 10.38 0.00 29.37 3.02
6140 11536 9.638176 ATTTATATCTTCAGGATCACTTTGCTT 57.362 29.630 0.00 0.00 35.98 3.91
6142 11538 5.640189 ATCTTCAGGATCACTTTGCTTTG 57.360 39.130 0.00 0.00 0.00 2.77
6163 11559 2.415090 GCATCATGTGTTGAGCAGTTCC 60.415 50.000 0.00 0.00 37.89 3.62
6198 11594 1.702957 CCTCAAAGACCAGGGTTACCA 59.297 52.381 2.98 0.00 40.13 3.25
6205 11601 3.798515 AGACCAGGGTTACCAATGTAGA 58.201 45.455 2.98 0.00 40.13 2.59
6213 11609 6.716628 CAGGGTTACCAATGTAGATATGCATT 59.283 38.462 3.54 0.00 40.13 3.56
6221 11617 7.394359 ACCAATGTAGATATGCATTTGGTATCC 59.606 37.037 22.28 2.88 36.13 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 21 5.695363 TCAACCTACTGACGTATCGAGATAG 59.305 44.000 0.00 0.00 0.00 2.08
128 136 4.472833 AGTCAATCAGAATTCAGGCCTACT 59.527 41.667 3.98 0.00 0.00 2.57
146 154 3.009363 TCAATCAGAATCCAGGCAGTCAA 59.991 43.478 0.00 0.00 0.00 3.18
242 252 4.270084 CGCGGAGAAGTATCAATAAAGCAA 59.730 41.667 0.00 0.00 0.00 3.91
342 352 1.697754 ACACATCCTCCCATCCCCC 60.698 63.158 0.00 0.00 0.00 5.40
343 353 1.533711 CACACATCCTCCCATCCCC 59.466 63.158 0.00 0.00 0.00 4.81
344 354 1.152881 GCACACATCCTCCCATCCC 60.153 63.158 0.00 0.00 0.00 3.85
345 355 1.131638 TAGCACACATCCTCCCATCC 58.868 55.000 0.00 0.00 0.00 3.51
346 356 2.105477 ACATAGCACACATCCTCCCATC 59.895 50.000 0.00 0.00 0.00 3.51
347 357 2.130193 ACATAGCACACATCCTCCCAT 58.870 47.619 0.00 0.00 0.00 4.00
348 358 1.583556 ACATAGCACACATCCTCCCA 58.416 50.000 0.00 0.00 0.00 4.37
349 359 4.357918 AATACATAGCACACATCCTCCC 57.642 45.455 0.00 0.00 0.00 4.30
350 360 5.615289 AGAAATACATAGCACACATCCTCC 58.385 41.667 0.00 0.00 0.00 4.30
351 361 8.090831 TCATAGAAATACATAGCACACATCCTC 58.909 37.037 0.00 0.00 0.00 3.71
352 362 7.966812 TCATAGAAATACATAGCACACATCCT 58.033 34.615 0.00 0.00 0.00 3.24
353 363 8.607441 TTCATAGAAATACATAGCACACATCC 57.393 34.615 0.00 0.00 0.00 3.51
354 364 8.715998 CCTTCATAGAAATACATAGCACACATC 58.284 37.037 0.00 0.00 0.00 3.06
358 368 7.217200 GGACCTTCATAGAAATACATAGCACA 58.783 38.462 0.00 0.00 0.00 4.57
384 394 5.505654 CCATTGGTCATTAGCGTTAATGTCC 60.506 44.000 28.41 28.41 46.66 4.02
391 401 2.643551 CCTCCATTGGTCATTAGCGTT 58.356 47.619 1.86 0.00 0.00 4.84
392 402 1.747206 GCCTCCATTGGTCATTAGCGT 60.747 52.381 1.86 0.00 0.00 5.07
393 403 0.947244 GCCTCCATTGGTCATTAGCG 59.053 55.000 1.86 0.00 0.00 4.26
394 404 1.952296 CAGCCTCCATTGGTCATTAGC 59.048 52.381 1.86 0.00 0.00 3.09
395 405 3.474600 CTCAGCCTCCATTGGTCATTAG 58.525 50.000 1.86 0.00 0.00 1.73
397 407 1.684248 GCTCAGCCTCCATTGGTCATT 60.684 52.381 1.86 0.00 0.00 2.57
398 408 0.106819 GCTCAGCCTCCATTGGTCAT 60.107 55.000 1.86 0.00 0.00 3.06
399 409 1.203441 AGCTCAGCCTCCATTGGTCA 61.203 55.000 1.86 0.00 0.00 4.02
401 411 1.606531 GAGCTCAGCCTCCATTGGT 59.393 57.895 9.40 0.00 0.00 3.67
402 412 4.555610 GAGCTCAGCCTCCATTGG 57.444 61.111 9.40 0.00 0.00 3.16
477 488 8.288689 AGTACACATGTGTATGTATGTCTGTA 57.711 34.615 34.66 12.74 45.53 2.74
523 616 6.513609 TTTACGCCACGTATGTATAATGTG 57.486 37.500 0.12 0.00 41.97 3.21
573 668 5.750067 AGCAGAACAAATAGCAAAACAGTTG 59.250 36.000 0.00 0.00 0.00 3.16
583 678 4.453819 ACAGAACAGAGCAGAACAAATAGC 59.546 41.667 0.00 0.00 0.00 2.97
678 773 4.530388 CAGAACACGCATAATATGGCAAG 58.470 43.478 2.13 0.00 0.00 4.01
685 780 5.584649 AGCTTTTAGCAGAACACGCATAATA 59.415 36.000 1.09 0.00 45.56 0.98
687 782 3.751175 AGCTTTTAGCAGAACACGCATAA 59.249 39.130 1.09 0.00 45.56 1.90
708 803 1.436983 GGGCGCCGTAATTCTTCCAG 61.437 60.000 22.54 0.00 0.00 3.86
765 860 1.270094 TGTTGTGTGGTCGGTGAGATC 60.270 52.381 0.00 0.00 0.00 2.75
777 872 2.859538 GTTGTGGCAGATTTGTTGTGTG 59.140 45.455 0.00 0.00 0.00 3.82
778 873 2.159114 GGTTGTGGCAGATTTGTTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
842 937 3.050275 GGCCCAGTTCGCAGTGAC 61.050 66.667 0.00 0.00 0.00 3.67
936 1031 1.980765 GGTGGAGAGATGGCATGGATA 59.019 52.381 3.81 0.00 0.00 2.59
937 1032 0.769873 GGTGGAGAGATGGCATGGAT 59.230 55.000 3.81 0.00 0.00 3.41
945 1040 1.609783 GGTTGGGGGTGGAGAGATG 59.390 63.158 0.00 0.00 0.00 2.90
998 1276 2.644992 GCTTGGGCCTTCACGTTG 59.355 61.111 4.53 0.00 0.00 4.10
1003 1281 2.668212 CGTTCGCTTGGGCCTTCA 60.668 61.111 4.53 0.00 34.44 3.02
1246 1530 2.670934 CTATGCCCCTCGCCATGC 60.671 66.667 0.00 0.00 36.24 4.06
1673 1965 6.062095 CCAAAATACTTGGGGATTAGATCGT 58.938 40.000 0.00 0.00 35.96 3.73
1721 2014 1.574428 CTCCCGTGCGAAAACCTTG 59.426 57.895 0.00 0.00 0.00 3.61
1745 2038 4.847444 GGCAGCTCCTTCCGCCTC 62.847 72.222 3.33 0.00 41.50 4.70
1878 2171 8.984764 CAAAACAGTAGCAGTACACTACAATTA 58.015 33.333 21.37 0.00 42.04 1.40
1882 2175 5.751509 CACAAAACAGTAGCAGTACACTACA 59.248 40.000 21.37 0.00 42.04 2.74
1893 2186 7.042051 TCACTTCATTCTACACAAAACAGTAGC 60.042 37.037 0.00 0.00 38.05 3.58
1894 2187 8.365399 TCACTTCATTCTACACAAAACAGTAG 57.635 34.615 0.00 0.00 39.19 2.57
1927 2220 6.884280 ACAGTTCAAATTACTGGAGGAAAG 57.116 37.500 10.76 0.00 45.67 2.62
2000 2300 2.037902 TCAGGCTGTCGACCAATAACAA 59.962 45.455 15.27 0.00 0.00 2.83
2001 2301 1.621317 TCAGGCTGTCGACCAATAACA 59.379 47.619 15.27 0.00 0.00 2.41
2018 2318 1.808411 AAATAGCCGGTGTGTGTCAG 58.192 50.000 1.90 0.00 0.00 3.51
2042 2343 2.176546 CGTCAAACGGCATGCTGG 59.823 61.111 29.43 18.16 38.08 4.85
2060 2366 0.178921 AGCCCTCTCTGGACTGAACA 60.179 55.000 0.00 0.00 38.35 3.18
2224 2539 6.543831 GGAGTAGTATTCAAATCCTGCAACAT 59.456 38.462 0.00 0.00 0.00 2.71
2225 2540 5.880332 GGAGTAGTATTCAAATCCTGCAACA 59.120 40.000 0.00 0.00 0.00 3.33
2231 2546 4.589374 CGGAGGGAGTAGTATTCAAATCCT 59.411 45.833 0.00 0.00 0.00 3.24
2245 2560 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2246 2561 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2247 2562 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2248 2563 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2249 2564 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
2250 2565 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
2264 2579 9.469807 CATAGCGAAATCTCTACAAAGACTTAT 57.530 33.333 0.00 0.00 0.00 1.73
2265 2580 7.921214 CCATAGCGAAATCTCTACAAAGACTTA 59.079 37.037 0.00 0.00 0.00 2.24
2266 2581 6.758886 CCATAGCGAAATCTCTACAAAGACTT 59.241 38.462 0.00 0.00 0.00 3.01
2267 2582 6.096987 TCCATAGCGAAATCTCTACAAAGACT 59.903 38.462 0.00 0.00 0.00 3.24
2268 2583 6.199342 GTCCATAGCGAAATCTCTACAAAGAC 59.801 42.308 0.00 0.00 0.00 3.01
2269 2584 6.273825 GTCCATAGCGAAATCTCTACAAAGA 58.726 40.000 0.00 0.00 0.00 2.52
2270 2585 5.463724 GGTCCATAGCGAAATCTCTACAAAG 59.536 44.000 0.00 0.00 0.00 2.77
2271 2586 5.105106 TGGTCCATAGCGAAATCTCTACAAA 60.105 40.000 0.00 0.00 0.00 2.83
2272 2587 4.404394 TGGTCCATAGCGAAATCTCTACAA 59.596 41.667 0.00 0.00 0.00 2.41
2273 2588 3.958147 TGGTCCATAGCGAAATCTCTACA 59.042 43.478 0.00 0.00 0.00 2.74
2274 2589 4.202121 TGTGGTCCATAGCGAAATCTCTAC 60.202 45.833 0.00 0.00 0.00 2.59
2275 2590 3.958147 TGTGGTCCATAGCGAAATCTCTA 59.042 43.478 0.00 0.00 0.00 2.43
2276 2591 2.766263 TGTGGTCCATAGCGAAATCTCT 59.234 45.455 0.00 0.00 0.00 3.10
2277 2592 3.179443 TGTGGTCCATAGCGAAATCTC 57.821 47.619 0.00 0.00 0.00 2.75
2278 2593 3.845781 ATGTGGTCCATAGCGAAATCT 57.154 42.857 0.00 0.00 29.82 2.40
2279 2594 3.428870 CGTATGTGGTCCATAGCGAAATC 59.571 47.826 8.91 0.00 36.71 2.17
2280 2595 3.390135 CGTATGTGGTCCATAGCGAAAT 58.610 45.455 8.91 0.00 36.71 2.17
2281 2596 2.816689 CGTATGTGGTCCATAGCGAAA 58.183 47.619 8.91 0.00 36.71 3.46
2282 2597 1.537348 GCGTATGTGGTCCATAGCGAA 60.537 52.381 15.93 0.00 36.71 4.70
2283 2598 0.031585 GCGTATGTGGTCCATAGCGA 59.968 55.000 15.93 0.00 36.71 4.93
2284 2599 0.249280 TGCGTATGTGGTCCATAGCG 60.249 55.000 0.00 2.93 36.71 4.26
2285 2600 1.800586 CATGCGTATGTGGTCCATAGC 59.199 52.381 5.20 0.00 36.71 2.97
2286 2601 3.111853 ACATGCGTATGTGGTCCATAG 57.888 47.619 18.78 0.00 45.54 2.23
2287 2602 4.882842 ATACATGCGTATGTGGTCCATA 57.117 40.909 26.72 7.38 46.63 2.74
2288 2603 3.769739 ATACATGCGTATGTGGTCCAT 57.230 42.857 26.72 10.74 46.63 3.41
2289 2604 4.882842 ATATACATGCGTATGTGGTCCA 57.117 40.909 26.72 8.82 46.63 4.02
2290 2605 6.203808 TCTATATACATGCGTATGTGGTCC 57.796 41.667 26.72 0.00 46.63 4.46
2291 2606 6.199154 GCATCTATATACATGCGTATGTGGTC 59.801 42.308 26.72 4.38 46.63 4.02
2292 2607 6.042777 GCATCTATATACATGCGTATGTGGT 58.957 40.000 26.72 17.69 46.63 4.16
2293 2608 6.516478 GCATCTATATACATGCGTATGTGG 57.484 41.667 26.72 12.41 46.63 4.17
2310 2625 9.534565 GTGAATCTACACTCTAAAATGCATCTA 57.465 33.333 0.00 0.00 37.73 1.98
2311 2626 8.263640 AGTGAATCTACACTCTAAAATGCATCT 58.736 33.333 0.00 0.00 46.36 2.90
2312 2627 8.430801 AGTGAATCTACACTCTAAAATGCATC 57.569 34.615 0.00 0.00 46.36 3.91
2325 2640 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
2326 2641 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
2327 2642 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
2328 2643 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
2329 2644 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
2330 2645 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
2331 2646 7.201679 GCTACATACAGAGCAAAATGAGTGAAT 60.202 37.037 0.00 0.00 38.62 2.57
2332 2647 6.092670 GCTACATACAGAGCAAAATGAGTGAA 59.907 38.462 0.00 0.00 38.62 3.18
2333 2648 5.582269 GCTACATACAGAGCAAAATGAGTGA 59.418 40.000 0.00 0.00 38.62 3.41
2334 2649 5.220739 GGCTACATACAGAGCAAAATGAGTG 60.221 44.000 0.00 0.00 40.64 3.51
2335 2650 4.878397 GGCTACATACAGAGCAAAATGAGT 59.122 41.667 0.00 0.00 40.64 3.41
2336 2651 4.274459 GGGCTACATACAGAGCAAAATGAG 59.726 45.833 0.00 0.00 40.64 2.90
2337 2652 4.199310 GGGCTACATACAGAGCAAAATGA 58.801 43.478 0.00 0.00 40.64 2.57
2338 2653 3.947196 TGGGCTACATACAGAGCAAAATG 59.053 43.478 0.00 0.00 40.64 2.32
2339 2654 4.235079 TGGGCTACATACAGAGCAAAAT 57.765 40.909 0.00 0.00 40.64 1.82
2340 2655 3.712016 TGGGCTACATACAGAGCAAAA 57.288 42.857 0.00 0.00 40.64 2.44
2341 2656 3.931907 ATGGGCTACATACAGAGCAAA 57.068 42.857 0.00 0.00 40.64 3.68
2342 2657 3.967326 ACTATGGGCTACATACAGAGCAA 59.033 43.478 0.00 0.00 41.03 3.91
2343 2658 3.321968 CACTATGGGCTACATACAGAGCA 59.678 47.826 0.00 0.00 41.03 4.26
2344 2659 3.306364 CCACTATGGGCTACATACAGAGC 60.306 52.174 0.00 0.00 41.03 4.09
2345 2660 4.152647 TCCACTATGGGCTACATACAGAG 58.847 47.826 0.00 0.00 41.03 3.35
2346 2661 4.193240 TCCACTATGGGCTACATACAGA 57.807 45.455 0.00 0.00 41.03 3.41
2347 2662 4.955811 TTCCACTATGGGCTACATACAG 57.044 45.455 0.00 0.00 41.03 2.74
2348 2663 5.155161 AGATTCCACTATGGGCTACATACA 58.845 41.667 0.00 0.00 41.03 2.29
2349 2664 5.482175 AGAGATTCCACTATGGGCTACATAC 59.518 44.000 0.00 0.00 41.03 2.39
2350 2665 5.655394 AGAGATTCCACTATGGGCTACATA 58.345 41.667 0.00 2.52 41.03 2.29
2351 2666 4.497516 AGAGATTCCACTATGGGCTACAT 58.502 43.478 0.00 0.46 43.68 2.29
2352 2667 3.928754 AGAGATTCCACTATGGGCTACA 58.071 45.455 0.00 0.00 38.32 2.74
2353 2668 4.833380 TGTAGAGATTCCACTATGGGCTAC 59.167 45.833 0.00 0.00 38.32 3.58
2354 2669 5.074746 TGTAGAGATTCCACTATGGGCTA 57.925 43.478 0.00 0.00 38.32 3.93
2355 2670 3.928754 TGTAGAGATTCCACTATGGGCT 58.071 45.455 0.00 0.00 38.32 5.19
2356 2671 4.689612 TTGTAGAGATTCCACTATGGGC 57.310 45.455 0.00 0.00 38.32 5.36
2357 2672 6.098982 AGTCTTTGTAGAGATTCCACTATGGG 59.901 42.308 0.00 0.00 38.32 4.00
2358 2673 7.118496 AGTCTTTGTAGAGATTCCACTATGG 57.882 40.000 0.00 0.00 39.43 2.74
2359 2674 8.037758 ACAAGTCTTTGTAGAGATTCCACTATG 58.962 37.037 0.00 0.00 45.45 2.23
2360 2675 8.140112 ACAAGTCTTTGTAGAGATTCCACTAT 57.860 34.615 0.00 0.00 45.45 2.12
2361 2676 7.540474 ACAAGTCTTTGTAGAGATTCCACTA 57.460 36.000 0.00 0.00 45.45 2.74
2362 2677 6.426646 ACAAGTCTTTGTAGAGATTCCACT 57.573 37.500 0.00 0.00 45.45 4.00
2375 2690 7.119846 CCCTCAGTTCCTAAATACAAGTCTTTG 59.880 40.741 0.00 0.00 40.24 2.77
2376 2691 7.017254 TCCCTCAGTTCCTAAATACAAGTCTTT 59.983 37.037 0.00 0.00 0.00 2.52
2377 2692 6.500751 TCCCTCAGTTCCTAAATACAAGTCTT 59.499 38.462 0.00 0.00 0.00 3.01
2378 2693 6.023603 TCCCTCAGTTCCTAAATACAAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
2379 2694 6.070710 ACTCCCTCAGTTCCTAAATACAAGTC 60.071 42.308 0.00 0.00 26.56 3.01
2380 2695 5.785940 ACTCCCTCAGTTCCTAAATACAAGT 59.214 40.000 0.00 0.00 26.56 3.16
2381 2696 6.301169 ACTCCCTCAGTTCCTAAATACAAG 57.699 41.667 0.00 0.00 26.56 3.16
2382 2697 6.727231 TGTACTCCCTCAGTTCCTAAATACAA 59.273 38.462 0.00 0.00 36.43 2.41
2383 2698 6.258354 TGTACTCCCTCAGTTCCTAAATACA 58.742 40.000 0.00 0.00 36.43 2.29
2384 2699 6.786967 TGTACTCCCTCAGTTCCTAAATAC 57.213 41.667 0.00 0.00 36.43 1.89
2385 2700 6.958192 ACTTGTACTCCCTCAGTTCCTAAATA 59.042 38.462 0.00 0.00 36.43 1.40
2386 2701 5.785940 ACTTGTACTCCCTCAGTTCCTAAAT 59.214 40.000 0.00 0.00 36.43 1.40
2387 2702 5.152934 ACTTGTACTCCCTCAGTTCCTAAA 58.847 41.667 0.00 0.00 36.43 1.85
2388 2703 4.748701 ACTTGTACTCCCTCAGTTCCTAA 58.251 43.478 0.00 0.00 36.43 2.69
2389 2704 4.399483 ACTTGTACTCCCTCAGTTCCTA 57.601 45.455 0.00 0.00 36.43 2.94
2390 2705 3.261818 ACTTGTACTCCCTCAGTTCCT 57.738 47.619 0.00 0.00 36.43 3.36
2391 2706 4.065789 CAAACTTGTACTCCCTCAGTTCC 58.934 47.826 0.00 0.00 36.43 3.62
2392 2707 4.957296 TCAAACTTGTACTCCCTCAGTTC 58.043 43.478 0.00 0.00 36.43 3.01
2393 2708 4.654262 TCTCAAACTTGTACTCCCTCAGTT 59.346 41.667 0.00 0.00 36.43 3.16
2394 2709 4.039366 GTCTCAAACTTGTACTCCCTCAGT 59.961 45.833 0.00 0.00 39.41 3.41
2395 2710 4.039245 TGTCTCAAACTTGTACTCCCTCAG 59.961 45.833 0.00 0.00 0.00 3.35
2396 2711 3.964688 TGTCTCAAACTTGTACTCCCTCA 59.035 43.478 0.00 0.00 0.00 3.86
2397 2712 4.602340 TGTCTCAAACTTGTACTCCCTC 57.398 45.455 0.00 0.00 0.00 4.30
2398 2713 5.308237 AGAATGTCTCAAACTTGTACTCCCT 59.692 40.000 0.00 0.00 0.00 4.20
2399 2714 5.552178 AGAATGTCTCAAACTTGTACTCCC 58.448 41.667 0.00 0.00 0.00 4.30
2400 2715 7.492994 GGATAGAATGTCTCAAACTTGTACTCC 59.507 40.741 0.00 0.00 0.00 3.85
2401 2716 8.035394 TGGATAGAATGTCTCAAACTTGTACTC 58.965 37.037 0.00 0.00 0.00 2.59
2402 2717 7.907389 TGGATAGAATGTCTCAAACTTGTACT 58.093 34.615 0.00 0.00 0.00 2.73
2449 2764 7.072030 GTCATATGTTCAGTTGTTTCAGTCAC 58.928 38.462 1.90 0.00 0.00 3.67
2527 2956 0.106769 TTGGCCAGTCACACACACAT 60.107 50.000 5.11 0.00 0.00 3.21
2566 2995 4.337274 TCAAATTATCACAGCTGGCATCAG 59.663 41.667 19.93 0.50 43.64 2.90
2610 3039 4.729227 TTTTTCTCCCAAACAGGTCAAC 57.271 40.909 0.00 0.00 34.66 3.18
2679 3135 8.672736 TGGAACAAAATAATGGCAACTCCAGAT 61.673 37.037 0.00 0.00 42.64 2.90
2818 3274 9.722056 GACAACAAATAATCCATGAACTGTATC 57.278 33.333 0.00 0.00 0.00 2.24
2882 3338 4.334759 CAGAGCTTCTGTCATATGTTTGGG 59.665 45.833 1.90 0.00 39.58 4.12
3146 3605 7.520119 AGAAAAACAAAAACCTTTAGAAGCG 57.480 32.000 0.00 0.00 0.00 4.68
3156 3615 7.856556 TGTGAAACAGAAGAAAAACAAAAACC 58.143 30.769 0.00 0.00 45.67 3.27
3262 3721 4.855340 TCCAAAGACCAATATCCTCCAAC 58.145 43.478 0.00 0.00 0.00 3.77
3296 3755 1.078214 CATGCTCGGTGTGTGGGAT 60.078 57.895 0.00 0.00 0.00 3.85
3368 3827 6.546772 TGCATGGAGCTTCATGAAACATAATA 59.453 34.615 34.79 8.70 45.30 0.98
3389 3848 1.597797 CTTTGGCACCACGGATGCAT 61.598 55.000 0.00 0.00 45.27 3.96
3390 3849 2.203408 TTTGGCACCACGGATGCA 60.203 55.556 9.58 0.00 45.27 3.96
3391 3850 2.200170 GACTTTGGCACCACGGATGC 62.200 60.000 0.00 0.00 42.62 3.91
3392 3851 0.606401 AGACTTTGGCACCACGGATG 60.606 55.000 0.00 0.00 0.00 3.51
3393 3852 0.606401 CAGACTTTGGCACCACGGAT 60.606 55.000 0.00 0.00 0.00 4.18
3394 3853 1.227823 CAGACTTTGGCACCACGGA 60.228 57.895 0.00 0.00 0.00 4.69
3395 3854 1.227823 TCAGACTTTGGCACCACGG 60.228 57.895 0.00 0.00 0.00 4.94
3580 4039 4.466828 CAGATTCTTTGTGGTGCGTTAAG 58.533 43.478 0.00 0.00 0.00 1.85
3652 4111 7.015195 ACCCATATATTGCACTTTAATTCACCC 59.985 37.037 0.00 0.00 0.00 4.61
3688 4147 4.518970 GGTGAATAGCAACCAAACTCTGAA 59.481 41.667 0.00 0.00 0.00 3.02
3852 4314 3.626670 CCATGAAGCAGGAAGAATCAGAC 59.373 47.826 0.00 0.00 0.00 3.51
3920 4382 7.153315 AGTGCTCCTAACTAAACAGTAAACTC 58.847 38.462 0.00 0.00 0.00 3.01
4034 4499 1.888512 TCCCGTACAGTAAGGACACAC 59.111 52.381 13.77 0.00 0.00 3.82
4063 4528 6.128007 ACGATCATTCATAAACACTGGTTTCC 60.128 38.462 0.00 0.00 43.60 3.13
4170 4636 9.073475 ACTAATGTTGCTGTTTAAACCATTAGA 57.927 29.630 33.07 17.05 34.83 2.10
4176 4642 7.483691 CGGATAACTAATGTTGCTGTTTAAACC 59.516 37.037 15.59 1.97 37.59 3.27
4216 4682 4.180057 CAGGAGCAGAGTTGACTACAATC 58.820 47.826 0.00 0.00 38.32 2.67
4407 4880 3.510753 TGGCATGACATGTTTTGCTGTAT 59.489 39.130 24.43 0.89 35.46 2.29
4457 4930 4.576873 TCAGCAACATGTAAAACGAGGAAA 59.423 37.500 0.00 0.00 0.00 3.13
4460 4933 4.685169 ATCAGCAACATGTAAAACGAGG 57.315 40.909 0.00 0.00 0.00 4.63
4462 4935 5.929415 TCAGTATCAGCAACATGTAAAACGA 59.071 36.000 0.00 0.00 0.00 3.85
4463 4936 6.164408 TCAGTATCAGCAACATGTAAAACG 57.836 37.500 0.00 0.00 0.00 3.60
4503 4976 4.881273 TCAACAGCTTGTACATTGACAGTT 59.119 37.500 0.00 0.00 0.00 3.16
4511 4984 5.590259 ACTGAAGTTTCAACAGCTTGTACAT 59.410 36.000 0.00 0.00 36.64 2.29
4519 4992 3.378427 ACCAGAACTGAAGTTTCAACAGC 59.622 43.478 3.19 0.00 38.56 4.40
4591 7453 1.134946 ACAAACCAGACTTGTGCAAGC 59.865 47.619 11.43 5.33 41.99 4.01
4613 7476 4.037208 CCATACTCCAAACAATCAGATGGC 59.963 45.833 0.00 0.00 32.87 4.40
4618 7481 4.437390 GCGAACCATACTCCAAACAATCAG 60.437 45.833 0.00 0.00 0.00 2.90
4641 7504 1.400846 CATGTAGCAAGAGCAGCAAGG 59.599 52.381 0.00 0.00 45.49 3.61
4707 7571 2.226330 GTGTGTAGGTCAACATTGGCA 58.774 47.619 0.00 0.00 33.59 4.92
4717 7581 2.572290 ACAAAGCCTTGTGTGTAGGTC 58.428 47.619 0.00 0.00 44.28 3.85
4724 7588 5.865085 TGACTATAGAACAAAGCCTTGTGT 58.135 37.500 6.78 0.00 45.25 3.72
4728 7592 8.814038 ATGATTTGACTATAGAACAAAGCCTT 57.186 30.769 25.57 17.57 38.55 4.35
4795 7659 9.552114 CAACTCATGTCATCTTAACAGAAAATC 57.448 33.333 0.00 0.00 30.76 2.17
4819 7683 5.007626 CCGTGTGAAGAAGAAGAATCAACAA 59.992 40.000 0.00 0.00 0.00 2.83
4828 7692 2.743636 TAGCCCGTGTGAAGAAGAAG 57.256 50.000 0.00 0.00 0.00 2.85
4838 7702 2.159014 TCGCAAGATAATTAGCCCGTGT 60.159 45.455 0.00 0.00 45.01 4.49
4857 7721 1.136147 GTCAGCCTGCAAAGCATCG 59.864 57.895 10.73 0.00 38.13 3.84
4941 7805 1.172180 ACATCCAGGGCACAACAACG 61.172 55.000 0.00 0.00 0.00 4.10
4977 7841 1.135141 GTCTCTGAACGAGCTGCTCAT 60.135 52.381 27.46 16.47 39.70 2.90
5016 7880 6.522054 TGAAAGAATCGGTATATGAGGGTTC 58.478 40.000 0.00 0.00 0.00 3.62
5021 7885 7.041167 TGGCAAATGAAAGAATCGGTATATGAG 60.041 37.037 0.00 0.00 0.00 2.90
5054 7918 8.239038 TCATATACACCAAGGAAAACAAAACA 57.761 30.769 0.00 0.00 0.00 2.83
5132 7996 0.825010 CCTGCACCTCAACAAGCCTT 60.825 55.000 0.00 0.00 0.00 4.35
5209 8073 2.637872 TGGTAGAGTGGAAAAGTGGGAG 59.362 50.000 0.00 0.00 0.00 4.30
5210 8074 2.637872 CTGGTAGAGTGGAAAAGTGGGA 59.362 50.000 0.00 0.00 0.00 4.37
5284 8154 6.804677 AGTGACAATGCACTTTTACATGAAA 58.195 32.000 0.00 0.00 46.42 2.69
5296 8166 1.067516 ACTGGCAAAGTGACAATGCAC 59.932 47.619 13.29 5.06 41.80 4.57
5297 8167 1.337703 GACTGGCAAAGTGACAATGCA 59.662 47.619 13.29 0.00 40.07 3.96
5298 8168 1.337703 TGACTGGCAAAGTGACAATGC 59.662 47.619 4.32 4.32 40.07 3.56
5299 8169 3.004024 GTGACTGGCAAAGTGACAATG 57.996 47.619 3.97 0.00 42.13 2.82
5303 8173 4.002982 TCATATGTGACTGGCAAAGTGAC 58.997 43.478 1.90 2.11 42.80 3.67
5304 8174 4.284829 TCATATGTGACTGGCAAAGTGA 57.715 40.909 1.90 0.00 40.07 3.41
5305 8175 4.216042 TGTTCATATGTGACTGGCAAAGTG 59.784 41.667 1.90 0.00 40.07 3.16
5306 8176 4.397420 TGTTCATATGTGACTGGCAAAGT 58.603 39.130 1.90 0.00 43.85 2.66
5307 8177 5.337554 CATGTTCATATGTGACTGGCAAAG 58.662 41.667 1.90 0.00 33.11 2.77
5308 8178 4.158209 CCATGTTCATATGTGACTGGCAAA 59.842 41.667 1.90 0.00 33.11 3.68
5336 8206 0.928229 GCTTTCGTGTGTGAACTCGT 59.072 50.000 1.00 0.00 0.00 4.18
5342 8212 7.302524 GGAAATTTTATAGCTTTCGTGTGTGA 58.697 34.615 0.00 0.00 31.21 3.58
5363 10692 1.278985 AGAGGATGTCATGCACGGAAA 59.721 47.619 7.12 0.00 0.00 3.13
5367 10696 3.746900 TGAGAGGATGTCATGCACG 57.253 52.632 7.12 0.00 31.16 5.34
5375 10704 1.134877 CAGCGTGTCATGAGAGGATGT 60.135 52.381 19.21 0.76 0.00 3.06
5376 10705 1.134877 ACAGCGTGTCATGAGAGGATG 60.135 52.381 23.95 23.95 33.12 3.51
5396 10725 4.398044 GGCCCTTTTCGATTTCTGTATCAA 59.602 41.667 0.00 0.00 0.00 2.57
5432 10761 4.578105 GGATAAGTTCTTCCATGCTTCTGG 59.422 45.833 0.00 0.00 37.66 3.86
5444 10773 4.652822 GTGTGTTGAGGGGATAAGTTCTT 58.347 43.478 0.00 0.00 0.00 2.52
5469 10798 5.294306 GCTCCATTCGATTTCTATGTTGTCA 59.706 40.000 0.00 0.00 0.00 3.58
5475 10804 4.319333 GCAGTGCTCCATTCGATTTCTATG 60.319 45.833 8.18 0.00 0.00 2.23
5494 10823 3.570550 AGAAACTCACTAGACGAAGCAGT 59.429 43.478 0.00 0.00 0.00 4.40
5501 10830 5.640189 TTTAGGGAGAAACTCACTAGACG 57.360 43.478 10.05 0.00 45.64 4.18
5502 10831 7.842982 AGAATTTAGGGAGAAACTCACTAGAC 58.157 38.462 10.05 5.01 45.64 2.59
5503 10832 7.674348 TGAGAATTTAGGGAGAAACTCACTAGA 59.326 37.037 10.05 7.17 45.64 2.43
5504 10833 7.762159 GTGAGAATTTAGGGAGAAACTCACTAG 59.238 40.741 1.10 0.00 45.64 2.57
5505 10834 7.234782 TGTGAGAATTTAGGGAGAAACTCACTA 59.765 37.037 19.45 6.65 43.12 2.74
5515 10849 5.521735 CGATCAACTGTGAGAATTTAGGGAG 59.478 44.000 0.00 0.00 37.14 4.30
5521 10855 3.679389 AGGCGATCAACTGTGAGAATTT 58.321 40.909 0.00 0.00 37.14 1.82
5522 10856 3.340814 AGGCGATCAACTGTGAGAATT 57.659 42.857 0.00 0.00 37.14 2.17
5523 10857 3.055530 AGAAGGCGATCAACTGTGAGAAT 60.056 43.478 0.00 0.00 37.14 2.40
5530 10864 2.095059 CCCAAAAGAAGGCGATCAACTG 60.095 50.000 0.00 0.00 0.00 3.16
5532 10866 1.202348 CCCCAAAAGAAGGCGATCAAC 59.798 52.381 0.00 0.00 0.00 3.18
5557 10891 8.246871 GGATTTCCAGAAAAGAGTATCCTTTTG 58.753 37.037 6.38 0.00 39.70 2.44
5558 10892 7.950124 TGGATTTCCAGAAAAGAGTATCCTTTT 59.050 33.333 0.00 0.00 43.21 2.27
5575 10909 3.369681 GCATGAGGCAAATTGGATTTCCA 60.370 43.478 0.00 0.00 43.30 3.53
5590 10924 6.073657 ACAAAATTCATTTTTCACGCATGAGG 60.074 34.615 0.00 0.00 37.86 3.86
5595 10929 8.136057 ACATTACAAAATTCATTTTTCACGCA 57.864 26.923 0.00 0.00 37.86 5.24
5614 10948 9.515020 TGTTGTTGAGATTTCTTTTGACATTAC 57.485 29.630 0.00 0.00 0.00 1.89
5653 10991 5.539955 ACTTTGAAGGTAGCATTTGGATGTT 59.460 36.000 0.00 0.00 35.63 2.71
5761 11105 2.884012 AGCAATGGTGTTTCGTCAATGA 59.116 40.909 0.00 0.00 0.00 2.57
5764 11108 2.290367 CAGAGCAATGGTGTTTCGTCAA 59.710 45.455 0.00 0.00 0.00 3.18
5778 11122 6.734137 ACAATTTTCATACGAAACAGAGCAA 58.266 32.000 0.00 0.00 40.84 3.91
5784 11128 6.499172 TGCTTGACAATTTTCATACGAAACA 58.501 32.000 0.00 0.00 40.84 2.83
5789 11133 5.097529 AGCATGCTTGACAATTTTCATACG 58.902 37.500 16.30 0.00 0.00 3.06
5808 11152 3.980646 TTTTGTTAGTGTCGCAAGCAT 57.019 38.095 0.00 0.00 37.18 3.79
5814 11158 6.561945 TTTTGATGTTTTTGTTAGTGTCGC 57.438 33.333 0.00 0.00 0.00 5.19
5836 11180 9.533253 CCGGAAGCATTTCTGAAATTATTTATT 57.467 29.630 12.74 2.82 41.37 1.40
5838 11182 7.340743 TCCCGGAAGCATTTCTGAAATTATTTA 59.659 33.333 12.74 0.00 41.37 1.40
5842 11186 4.594970 TCCCGGAAGCATTTCTGAAATTA 58.405 39.130 12.74 0.00 41.37 1.40
5844 11188 3.019564 CTCCCGGAAGCATTTCTGAAAT 58.980 45.455 0.73 9.76 41.37 2.17
5845 11189 2.436417 CTCCCGGAAGCATTTCTGAAA 58.564 47.619 0.73 5.15 41.37 2.69
5846 11190 1.950484 GCTCCCGGAAGCATTTCTGAA 60.950 52.381 8.27 0.00 41.37 3.02
5847 11191 0.392998 GCTCCCGGAAGCATTTCTGA 60.393 55.000 8.27 0.00 41.37 3.27
5848 11192 1.379642 GGCTCCCGGAAGCATTTCTG 61.380 60.000 16.96 0.00 44.35 3.02
5850 11194 0.965363 TTGGCTCCCGGAAGCATTTC 60.965 55.000 16.96 0.00 44.35 2.17
5853 11249 1.076549 TTTTGGCTCCCGGAAGCAT 59.923 52.632 16.96 0.00 44.35 3.79
5858 11254 2.031465 GACGTTTTGGCTCCCGGA 59.969 61.111 0.73 0.00 0.00 5.14
5874 11270 2.274542 TGGGCAAATAGTGGAAGAGGA 58.725 47.619 0.00 0.00 0.00 3.71
5875 11271 2.806945 TGGGCAAATAGTGGAAGAGG 57.193 50.000 0.00 0.00 0.00 3.69
5877 11273 5.332743 AGAAAATGGGCAAATAGTGGAAGA 58.667 37.500 0.00 0.00 0.00 2.87
5879 11275 5.332743 AGAGAAAATGGGCAAATAGTGGAA 58.667 37.500 0.00 0.00 0.00 3.53
5880 11276 4.934356 AGAGAAAATGGGCAAATAGTGGA 58.066 39.130 0.00 0.00 0.00 4.02
5882 11278 5.649395 TGAGAGAGAAAATGGGCAAATAGTG 59.351 40.000 0.00 0.00 0.00 2.74
5884 11280 5.298777 CCTGAGAGAGAAAATGGGCAAATAG 59.701 44.000 0.00 0.00 0.00 1.73
5885 11281 5.195940 CCTGAGAGAGAAAATGGGCAAATA 58.804 41.667 0.00 0.00 0.00 1.40
5886 11282 4.021916 CCTGAGAGAGAAAATGGGCAAAT 58.978 43.478 0.00 0.00 0.00 2.32
5887 11283 3.424703 CCTGAGAGAGAAAATGGGCAAA 58.575 45.455 0.00 0.00 0.00 3.68
5888 11284 2.291153 CCCTGAGAGAGAAAATGGGCAA 60.291 50.000 0.00 0.00 0.00 4.52
5889 11285 1.283029 CCCTGAGAGAGAAAATGGGCA 59.717 52.381 0.00 0.00 0.00 5.36
5890 11286 1.409381 CCCCTGAGAGAGAAAATGGGC 60.409 57.143 0.00 0.00 32.26 5.36
5891 11287 1.409381 GCCCCTGAGAGAGAAAATGGG 60.409 57.143 0.00 0.00 34.81 4.00
5892 11288 1.409381 GGCCCCTGAGAGAGAAAATGG 60.409 57.143 0.00 0.00 0.00 3.16
5909 11305 1.947456 GTCATTGAACCCGATAAGGCC 59.053 52.381 0.00 0.00 39.21 5.19
5928 11324 9.686683 AAAGTGTTTATCTATGCAAGAATAGGT 57.313 29.630 0.00 0.00 37.89 3.08
5932 11328 9.956720 GCATAAAGTGTTTATCTATGCAAGAAT 57.043 29.630 7.34 0.00 42.76 2.40
5963 11359 1.068610 TGAGGAAATTTTGCGCGGAAG 60.069 47.619 14.05 0.00 0.00 3.46
5965 11361 0.521291 CTGAGGAAATTTTGCGCGGA 59.479 50.000 8.83 0.00 28.94 5.54
5968 11364 2.704725 TGTCTGAGGAAATTTTGCGC 57.295 45.000 0.00 0.00 0.00 6.09
5969 11365 3.922240 CCAATGTCTGAGGAAATTTTGCG 59.078 43.478 0.00 0.00 27.55 4.85
5975 11371 2.450476 GGTGCCAATGTCTGAGGAAAT 58.550 47.619 0.00 0.00 0.00 2.17
5984 11380 0.322187 AACCTACGGGTGCCAATGTC 60.322 55.000 0.00 0.00 46.67 3.06
5996 11392 2.095567 TCGACGGAGAAAGAAACCTACG 60.096 50.000 0.00 0.00 42.15 3.51
6000 11396 2.719426 TCTCGACGGAGAAAGAAACC 57.281 50.000 0.00 0.00 46.11 3.27
6013 11409 1.337071 TGGTCTTCAGTGTGTCTCGAC 59.663 52.381 0.00 0.00 0.00 4.20
6015 11411 2.398498 CTTGGTCTTCAGTGTGTCTCG 58.602 52.381 0.00 0.00 0.00 4.04
6025 11421 3.490439 TCTTGTGATGCTTGGTCTTCA 57.510 42.857 0.00 0.00 0.00 3.02
6037 11433 3.760684 GGGCACTTTTCTGATCTTGTGAT 59.239 43.478 0.00 0.00 35.26 3.06
6057 11453 3.328382 TTTCGTGGTGAGTCTTATGGG 57.672 47.619 0.00 0.00 0.00 4.00
6062 11458 1.697432 TGGGATTTCGTGGTGAGTCTT 59.303 47.619 0.00 0.00 0.00 3.01
6067 11463 0.327924 AGCATGGGATTTCGTGGTGA 59.672 50.000 0.00 0.00 33.70 4.02
6070 11466 1.335810 CATGAGCATGGGATTTCGTGG 59.664 52.381 2.54 0.00 35.24 4.94
6095 11491 5.728351 AAATCATATGTCACCCGTTTACG 57.272 39.130 1.90 0.00 39.44 3.18
6101 11497 9.091784 CTGAAGATATAAATCATATGTCACCCG 57.908 37.037 1.90 0.00 34.28 5.28
6112 11508 9.060347 GCAAAGTGATCCTGAAGATATAAATCA 57.940 33.333 0.00 0.00 34.42 2.57
6113 11509 9.282569 AGCAAAGTGATCCTGAAGATATAAATC 57.717 33.333 0.00 0.00 34.42 2.17
6114 11510 9.638176 AAGCAAAGTGATCCTGAAGATATAAAT 57.362 29.630 0.00 0.00 34.42 1.40
6115 11511 9.466497 AAAGCAAAGTGATCCTGAAGATATAAA 57.534 29.630 0.00 0.00 34.42 1.40
6116 11512 8.896744 CAAAGCAAAGTGATCCTGAAGATATAA 58.103 33.333 0.00 0.00 34.42 0.98
6117 11513 7.012704 GCAAAGCAAAGTGATCCTGAAGATATA 59.987 37.037 0.00 0.00 34.42 0.86
6118 11514 6.183360 GCAAAGCAAAGTGATCCTGAAGATAT 60.183 38.462 0.00 0.00 34.42 1.63
6125 11521 3.057104 TGATGCAAAGCAAAGTGATCCTG 60.057 43.478 0.00 0.00 43.62 3.86
6127 11523 3.581024 TGATGCAAAGCAAAGTGATCC 57.419 42.857 0.00 0.00 43.62 3.36
6140 11536 2.232399 ACTGCTCAACACATGATGCAA 58.768 42.857 0.00 0.00 39.79 4.08
6142 11538 2.415090 GGAACTGCTCAACACATGATGC 60.415 50.000 0.00 0.00 37.44 3.91
6163 11559 1.387539 TGAGGAGATCTCGTCAGCAG 58.612 55.000 33.59 0.00 45.86 4.24
6198 11594 8.385491 TCTGGATACCAAATGCATATCTACATT 58.615 33.333 0.00 0.00 38.11 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.