Multiple sequence alignment - TraesCS6A01G319600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G319600 chr6A 100.000 2762 0 0 1 2762 555087987 555090748 0.000000e+00 5101
1 TraesCS6A01G319600 chr6A 80.717 586 89 15 997 1579 554855592 554856156 4.220000e-118 435
2 TraesCS6A01G319600 chr6A 86.061 165 20 3 1 164 570495036 570494874 1.020000e-39 174
3 TraesCS6A01G319600 chr6A 82.738 168 28 1 1 168 399715798 399715632 6.160000e-32 148
4 TraesCS6A01G319600 chr6A 84.921 126 12 7 1810 1932 100813510 100813389 1.340000e-23 121
5 TraesCS6A01G319600 chr6D 90.884 1459 70 30 389 1816 409654604 409656030 0.000000e+00 1899
6 TraesCS6A01G319600 chr6D 86.642 539 36 13 1960 2485 409656083 409656598 5.160000e-157 564
7 TraesCS6A01G319600 chr6D 81.122 588 83 19 997 1579 409584183 409584747 1.950000e-121 446
8 TraesCS6A01G319600 chr6D 79.863 586 91 15 997 1579 409516321 409516882 1.190000e-108 403
9 TraesCS6A01G319600 chr6D 79.927 548 66 25 997 1516 409519042 409519573 2.020000e-96 363
10 TraesCS6A01G319600 chr6D 85.600 250 17 8 2513 2762 409656780 409657010 7.640000e-61 244
11 TraesCS6A01G319600 chr6B 92.395 1144 52 13 689 1816 615605132 615606256 0.000000e+00 1598
12 TraesCS6A01G319600 chr6B 84.615 858 67 27 1921 2762 615606248 615607056 0.000000e+00 793
13 TraesCS6A01G319600 chr6B 80.952 588 84 18 997 1579 615275459 615276023 9.080000e-120 440
14 TraesCS6A01G319600 chr6B 80.546 586 90 15 997 1579 615167071 615167635 1.970000e-116 429
15 TraesCS6A01G319600 chr6B 80.034 586 90 15 997 1579 615230326 615230887 2.560000e-110 409
16 TraesCS6A01G319600 chr6B 91.463 82 7 0 997 1078 615294926 615295007 2.250000e-21 113
17 TraesCS6A01G319600 chr3A 89.119 386 29 8 980 1358 687598407 687598028 4.170000e-128 468
18 TraesCS6A01G319600 chr3A 83.030 165 27 1 1 165 690974852 690974689 6.160000e-32 148
19 TraesCS6A01G319600 chr7B 88.630 387 29 8 980 1358 213254287 213254666 9.020000e-125 457
20 TraesCS6A01G319600 chr2B 88.114 387 31 9 980 1358 84773208 84772829 1.950000e-121 446
21 TraesCS6A01G319600 chr2B 85.185 108 14 2 1815 1921 79634662 79634556 2.910000e-20 110
22 TraesCS6A01G319600 chr2B 85.321 109 13 3 1815 1922 615802258 615802364 2.910000e-20 110
23 TraesCS6A01G319600 chr1B 87.597 387 28 10 980 1358 559573460 559573086 5.460000e-117 431
24 TraesCS6A01G319600 chr1B 86.087 115 12 4 1811 1924 608532304 608532193 1.340000e-23 121
25 TraesCS6A01G319600 chr5A 87.047 386 37 7 980 1358 340598283 340597904 9.140000e-115 424
26 TraesCS6A01G319600 chr5A 84.571 175 23 4 1 174 573617867 573618038 1.320000e-38 171
27 TraesCS6A01G319600 chr5A 88.182 110 8 5 1815 1922 595496418 595496524 2.890000e-25 126
28 TraesCS6A01G319600 chr5A 86.667 105 9 3 1814 1916 170089587 170089486 8.090000e-21 111
29 TraesCS6A01G319600 chr3D 87.273 165 20 1 1 165 464859647 464859810 1.310000e-43 187
30 TraesCS6A01G319600 chr7D 84.831 178 22 5 1 177 478152672 478152845 1.020000e-39 174
31 TraesCS6A01G319600 chr7D 85.321 109 11 2 1815 1923 110577769 110577666 1.050000e-19 108
32 TraesCS6A01G319600 chr5D 85.629 167 23 1 2 168 335122901 335122736 1.020000e-39 174
33 TraesCS6A01G319600 chr7A 85.987 157 20 2 1 156 122205731 122205576 1.700000e-37 167
34 TraesCS6A01G319600 chr4A 86.755 151 17 3 1 150 151317667 151317519 6.120000e-37 165
35 TraesCS6A01G319600 chr4A 85.088 114 9 6 1810 1920 32405296 32405188 2.910000e-20 110
36 TraesCS6A01G319600 chr4D 83.230 161 21 5 1358 1515 467636284 467636127 2.870000e-30 143
37 TraesCS6A01G319600 chr1D 85.185 108 15 1 1815 1922 220423765 220423871 2.910000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G319600 chr6A 555087987 555090748 2761 False 5101.000000 5101 100.000000 1 2762 1 chr6A.!!$F2 2761
1 TraesCS6A01G319600 chr6A 554855592 554856156 564 False 435.000000 435 80.717000 997 1579 1 chr6A.!!$F1 582
2 TraesCS6A01G319600 chr6D 409654604 409657010 2406 False 902.333333 1899 87.708667 389 2762 3 chr6D.!!$F3 2373
3 TraesCS6A01G319600 chr6D 409584183 409584747 564 False 446.000000 446 81.122000 997 1579 1 chr6D.!!$F1 582
4 TraesCS6A01G319600 chr6D 409516321 409519573 3252 False 383.000000 403 79.895000 997 1579 2 chr6D.!!$F2 582
5 TraesCS6A01G319600 chr6B 615605132 615607056 1924 False 1195.500000 1598 88.505000 689 2762 2 chr6B.!!$F5 2073
6 TraesCS6A01G319600 chr6B 615275459 615276023 564 False 440.000000 440 80.952000 997 1579 1 chr6B.!!$F3 582
7 TraesCS6A01G319600 chr6B 615167071 615167635 564 False 429.000000 429 80.546000 997 1579 1 chr6B.!!$F1 582
8 TraesCS6A01G319600 chr6B 615230326 615230887 561 False 409.000000 409 80.034000 997 1579 1 chr6B.!!$F2 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 388 0.030101 TGCTTAACACAAACGCTGCC 59.97 50.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2150 4361 0.040425 CGCTGAACGGTCAAAAAGGG 60.04 55.0 3.93 0.0 38.44 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 7.938140 TTTCTTATGAAATGTGAAGGGTAGG 57.062 36.000 0.00 0.00 37.27 3.18
42 43 6.884472 TCTTATGAAATGTGAAGGGTAGGA 57.116 37.500 0.00 0.00 0.00 2.94
43 44 7.265599 TCTTATGAAATGTGAAGGGTAGGAA 57.734 36.000 0.00 0.00 0.00 3.36
44 45 7.338710 TCTTATGAAATGTGAAGGGTAGGAAG 58.661 38.462 0.00 0.00 0.00 3.46
45 46 5.779241 ATGAAATGTGAAGGGTAGGAAGA 57.221 39.130 0.00 0.00 0.00 2.87
46 47 5.576563 TGAAATGTGAAGGGTAGGAAGAA 57.423 39.130 0.00 0.00 0.00 2.52
47 48 6.139679 TGAAATGTGAAGGGTAGGAAGAAT 57.860 37.500 0.00 0.00 0.00 2.40
48 49 6.552008 TGAAATGTGAAGGGTAGGAAGAATT 58.448 36.000 0.00 0.00 0.00 2.17
49 50 6.659242 TGAAATGTGAAGGGTAGGAAGAATTC 59.341 38.462 0.00 0.00 46.67 2.17
74 75 7.355778 CCTTCGTAGGAATAAGATTTCATTGC 58.644 38.462 0.98 0.00 45.05 3.56
75 76 7.227512 CCTTCGTAGGAATAAGATTTCATTGCT 59.772 37.037 0.98 0.00 45.05 3.91
76 77 9.261180 CTTCGTAGGAATAAGATTTCATTGCTA 57.739 33.333 0.00 0.00 34.96 3.49
77 78 9.778741 TTCGTAGGAATAAGATTTCATTGCTAT 57.221 29.630 0.00 0.00 37.39 2.97
88 89 8.593945 AGATTTCATTGCTATAAACCAAAGGA 57.406 30.769 0.00 0.00 0.00 3.36
89 90 9.205513 AGATTTCATTGCTATAAACCAAAGGAT 57.794 29.630 0.00 0.00 0.00 3.24
162 163 8.037166 ACAAAATTCCTCTAAATCAATGAAGGC 58.963 33.333 0.00 0.00 0.00 4.35
163 164 6.721704 AATTCCTCTAAATCAATGAAGGCC 57.278 37.500 0.00 0.00 0.00 5.19
164 165 5.456921 TTCCTCTAAATCAATGAAGGCCT 57.543 39.130 0.00 0.00 0.00 5.19
165 166 4.785301 TCCTCTAAATCAATGAAGGCCTG 58.215 43.478 5.69 0.00 0.00 4.85
166 167 4.474651 TCCTCTAAATCAATGAAGGCCTGA 59.525 41.667 5.69 0.00 0.00 3.86
167 168 4.820716 CCTCTAAATCAATGAAGGCCTGAG 59.179 45.833 5.69 3.41 0.00 3.35
168 169 5.435291 CTCTAAATCAATGAAGGCCTGAGT 58.565 41.667 5.69 0.00 0.00 3.41
169 170 5.188434 TCTAAATCAATGAAGGCCTGAGTG 58.812 41.667 5.69 6.02 0.00 3.51
170 171 3.446442 AATCAATGAAGGCCTGAGTGT 57.554 42.857 5.69 0.00 0.00 3.55
171 172 2.189594 TCAATGAAGGCCTGAGTGTG 57.810 50.000 5.69 1.15 0.00 3.82
172 173 1.421268 TCAATGAAGGCCTGAGTGTGT 59.579 47.619 5.69 0.00 0.00 3.72
173 174 1.808945 CAATGAAGGCCTGAGTGTGTC 59.191 52.381 5.69 0.00 0.00 3.67
174 175 1.356124 ATGAAGGCCTGAGTGTGTCT 58.644 50.000 5.69 0.00 0.00 3.41
175 176 2.009681 TGAAGGCCTGAGTGTGTCTA 57.990 50.000 5.69 0.00 0.00 2.59
176 177 1.895798 TGAAGGCCTGAGTGTGTCTAG 59.104 52.381 5.69 0.00 0.00 2.43
177 178 0.610687 AAGGCCTGAGTGTGTCTAGC 59.389 55.000 5.69 0.00 0.00 3.42
178 179 0.542938 AGGCCTGAGTGTGTCTAGCA 60.543 55.000 3.11 0.00 0.00 3.49
179 180 0.108424 GGCCTGAGTGTGTCTAGCAG 60.108 60.000 0.00 0.00 0.00 4.24
180 181 0.739112 GCCTGAGTGTGTCTAGCAGC 60.739 60.000 0.00 0.00 0.00 5.25
181 182 0.108424 CCTGAGTGTGTCTAGCAGCC 60.108 60.000 0.00 0.00 0.00 4.85
182 183 0.605083 CTGAGTGTGTCTAGCAGCCA 59.395 55.000 0.00 0.00 0.00 4.75
183 184 0.318441 TGAGTGTGTCTAGCAGCCAC 59.682 55.000 0.00 0.00 0.00 5.01
184 185 0.318441 GAGTGTGTCTAGCAGCCACA 59.682 55.000 0.00 0.00 36.79 4.17
185 186 0.979665 AGTGTGTCTAGCAGCCACAT 59.020 50.000 5.62 0.00 40.81 3.21
186 187 1.081892 GTGTGTCTAGCAGCCACATG 58.918 55.000 5.62 0.00 40.81 3.21
187 188 0.036105 TGTGTCTAGCAGCCACATGG 60.036 55.000 0.00 0.00 34.37 3.66
188 189 0.036010 GTGTCTAGCAGCCACATGGT 60.036 55.000 0.00 0.00 37.57 3.55
189 190 0.692476 TGTCTAGCAGCCACATGGTT 59.308 50.000 0.00 0.00 37.57 3.67
190 191 1.073763 TGTCTAGCAGCCACATGGTTT 59.926 47.619 0.00 0.00 37.57 3.27
191 192 1.740025 GTCTAGCAGCCACATGGTTTC 59.260 52.381 0.00 0.00 37.57 2.78
192 193 1.350684 TCTAGCAGCCACATGGTTTCA 59.649 47.619 0.00 0.00 37.57 2.69
193 194 2.161855 CTAGCAGCCACATGGTTTCAA 58.838 47.619 0.00 0.00 37.57 2.69
194 195 1.412079 AGCAGCCACATGGTTTCAAA 58.588 45.000 0.00 0.00 37.57 2.69
195 196 1.972795 AGCAGCCACATGGTTTCAAAT 59.027 42.857 0.00 0.00 37.57 2.32
196 197 3.164268 AGCAGCCACATGGTTTCAAATA 58.836 40.909 0.00 0.00 37.57 1.40
197 198 3.194116 AGCAGCCACATGGTTTCAAATAG 59.806 43.478 0.00 0.00 37.57 1.73
198 199 3.514645 CAGCCACATGGTTTCAAATAGC 58.485 45.455 0.00 0.00 37.57 2.97
199 200 2.164219 AGCCACATGGTTTCAAATAGCG 59.836 45.455 0.00 0.00 37.57 4.26
200 201 2.163412 GCCACATGGTTTCAAATAGCGA 59.837 45.455 0.00 0.00 37.57 4.93
201 202 3.758300 CCACATGGTTTCAAATAGCGAC 58.242 45.455 0.00 0.00 0.00 5.19
202 203 3.416277 CACATGGTTTCAAATAGCGACG 58.584 45.455 0.00 0.00 0.00 5.12
203 204 2.418628 ACATGGTTTCAAATAGCGACGG 59.581 45.455 0.00 0.00 0.00 4.79
204 205 1.444836 TGGTTTCAAATAGCGACGGG 58.555 50.000 0.00 0.00 0.00 5.28
205 206 0.730840 GGTTTCAAATAGCGACGGGG 59.269 55.000 0.00 0.00 0.00 5.73
206 207 1.676615 GGTTTCAAATAGCGACGGGGA 60.677 52.381 0.00 0.00 0.00 4.81
207 208 2.078392 GTTTCAAATAGCGACGGGGAA 58.922 47.619 0.00 0.00 0.00 3.97
208 209 2.681344 GTTTCAAATAGCGACGGGGAAT 59.319 45.455 0.00 0.00 0.00 3.01
209 210 3.823281 TTCAAATAGCGACGGGGAATA 57.177 42.857 0.00 0.00 0.00 1.75
210 211 3.380479 TCAAATAGCGACGGGGAATAG 57.620 47.619 0.00 0.00 0.00 1.73
211 212 1.798813 CAAATAGCGACGGGGAATAGC 59.201 52.381 0.00 0.00 0.00 2.97
212 213 1.045407 AATAGCGACGGGGAATAGCA 58.955 50.000 0.00 0.00 0.00 3.49
213 214 0.603569 ATAGCGACGGGGAATAGCAG 59.396 55.000 0.00 0.00 0.00 4.24
214 215 0.754217 TAGCGACGGGGAATAGCAGT 60.754 55.000 0.00 0.00 0.00 4.40
215 216 1.591863 GCGACGGGGAATAGCAGTC 60.592 63.158 0.00 0.00 0.00 3.51
216 217 2.017559 GCGACGGGGAATAGCAGTCT 62.018 60.000 0.00 0.00 0.00 3.24
217 218 0.460311 CGACGGGGAATAGCAGTCTT 59.540 55.000 0.00 0.00 0.00 3.01
218 219 1.536284 CGACGGGGAATAGCAGTCTTC 60.536 57.143 0.00 0.00 0.00 2.87
219 220 0.460311 ACGGGGAATAGCAGTCTTCG 59.540 55.000 0.00 0.00 0.00 3.79
220 221 0.876342 CGGGGAATAGCAGTCTTCGC 60.876 60.000 0.00 0.00 34.57 4.70
221 222 0.178068 GGGGAATAGCAGTCTTCGCA 59.822 55.000 0.00 0.00 36.39 5.10
222 223 1.406887 GGGGAATAGCAGTCTTCGCAA 60.407 52.381 0.00 0.00 36.39 4.85
223 224 2.356135 GGGAATAGCAGTCTTCGCAAA 58.644 47.619 0.00 0.00 35.20 3.68
224 225 2.352960 GGGAATAGCAGTCTTCGCAAAG 59.647 50.000 0.00 0.00 35.20 2.77
225 226 2.352960 GGAATAGCAGTCTTCGCAAAGG 59.647 50.000 0.00 0.00 33.03 3.11
226 227 2.770164 ATAGCAGTCTTCGCAAAGGT 57.230 45.000 0.00 0.00 33.03 3.50
227 228 3.887621 ATAGCAGTCTTCGCAAAGGTA 57.112 42.857 0.00 0.00 33.03 3.08
228 229 2.086054 AGCAGTCTTCGCAAAGGTAG 57.914 50.000 0.00 0.00 33.03 3.18
229 230 1.079503 GCAGTCTTCGCAAAGGTAGG 58.920 55.000 0.00 0.00 33.03 3.18
230 231 1.608283 GCAGTCTTCGCAAAGGTAGGT 60.608 52.381 0.00 0.00 33.03 3.08
231 232 2.338500 CAGTCTTCGCAAAGGTAGGTC 58.662 52.381 0.00 0.00 33.03 3.85
232 233 1.968493 AGTCTTCGCAAAGGTAGGTCA 59.032 47.619 0.00 0.00 33.03 4.02
233 234 2.067013 GTCTTCGCAAAGGTAGGTCAC 58.933 52.381 0.00 0.00 33.03 3.67
234 235 1.068474 CTTCGCAAAGGTAGGTCACG 58.932 55.000 0.00 0.00 0.00 4.35
235 236 0.320073 TTCGCAAAGGTAGGTCACGG 60.320 55.000 0.00 0.00 0.00 4.94
236 237 1.005394 CGCAAAGGTAGGTCACGGT 60.005 57.895 0.00 0.00 0.00 4.83
237 238 0.601841 CGCAAAGGTAGGTCACGGTT 60.602 55.000 0.00 0.00 0.00 4.44
238 239 1.601166 GCAAAGGTAGGTCACGGTTT 58.399 50.000 0.00 0.00 0.00 3.27
239 240 1.534163 GCAAAGGTAGGTCACGGTTTC 59.466 52.381 0.00 0.00 0.00 2.78
240 241 2.148768 CAAAGGTAGGTCACGGTTTCC 58.851 52.381 0.00 0.00 0.00 3.13
250 251 2.281208 CGGTTTCCGGTGCTTGGA 60.281 61.111 0.00 0.00 44.15 3.53
251 252 2.325082 CGGTTTCCGGTGCTTGGAG 61.325 63.158 0.00 0.00 44.15 3.86
252 253 1.072505 GGTTTCCGGTGCTTGGAGA 59.927 57.895 0.00 0.00 36.72 3.71
253 254 0.322546 GGTTTCCGGTGCTTGGAGAT 60.323 55.000 0.00 0.00 36.72 2.75
254 255 1.065709 GGTTTCCGGTGCTTGGAGATA 60.066 52.381 0.00 0.00 36.72 1.98
255 256 2.007608 GTTTCCGGTGCTTGGAGATAC 58.992 52.381 0.00 0.00 36.72 2.24
256 257 1.271856 TTCCGGTGCTTGGAGATACA 58.728 50.000 0.00 0.00 36.72 2.29
257 258 1.496060 TCCGGTGCTTGGAGATACAT 58.504 50.000 0.00 0.00 0.00 2.29
258 259 2.673258 TCCGGTGCTTGGAGATACATA 58.327 47.619 0.00 0.00 0.00 2.29
259 260 2.364324 TCCGGTGCTTGGAGATACATAC 59.636 50.000 0.00 0.00 0.00 2.39
260 261 2.394708 CGGTGCTTGGAGATACATACG 58.605 52.381 0.00 0.00 0.00 3.06
261 262 2.755650 GGTGCTTGGAGATACATACGG 58.244 52.381 0.00 0.00 0.00 4.02
262 263 2.102588 GGTGCTTGGAGATACATACGGT 59.897 50.000 0.00 0.00 0.00 4.83
263 264 3.319972 GGTGCTTGGAGATACATACGGTA 59.680 47.826 0.00 0.00 36.16 4.02
264 265 4.296690 GTGCTTGGAGATACATACGGTAC 58.703 47.826 0.00 0.00 34.07 3.34
265 266 3.319972 TGCTTGGAGATACATACGGTACC 59.680 47.826 0.16 0.16 34.07 3.34
266 267 3.573110 GCTTGGAGATACATACGGTACCT 59.427 47.826 10.90 0.00 34.07 3.08
267 268 4.321082 GCTTGGAGATACATACGGTACCTC 60.321 50.000 10.90 0.00 41.31 3.85
268 269 4.442401 TGGAGATACATACGGTACCTCA 57.558 45.455 10.90 0.00 43.50 3.86
269 270 4.395625 TGGAGATACATACGGTACCTCAG 58.604 47.826 10.90 0.00 43.50 3.35
270 271 3.757493 GGAGATACATACGGTACCTCAGG 59.243 52.174 10.90 1.38 43.50 3.86
271 272 4.396522 GAGATACATACGGTACCTCAGGT 58.603 47.826 10.90 0.00 41.62 4.00
272 273 4.396522 AGATACATACGGTACCTCAGGTC 58.603 47.826 10.90 0.00 37.09 3.85
273 274 2.519771 ACATACGGTACCTCAGGTCA 57.480 50.000 10.90 0.00 37.09 4.02
274 275 2.097825 ACATACGGTACCTCAGGTCAC 58.902 52.381 10.90 0.00 37.09 3.67
275 276 1.065102 CATACGGTACCTCAGGTCACG 59.935 57.143 16.32 16.32 39.60 4.35
276 277 1.308069 TACGGTACCTCAGGTCACGC 61.308 60.000 17.50 0.32 38.09 5.34
277 278 2.181021 GGTACCTCAGGTCACGCG 59.819 66.667 0.00 3.53 37.09 6.01
278 279 2.181021 GTACCTCAGGTCACGCGG 59.819 66.667 12.47 0.00 37.09 6.46
279 280 3.755628 TACCTCAGGTCACGCGGC 61.756 66.667 12.47 0.00 37.09 6.53
287 288 4.830765 GTCACGCGGCCAGCCATA 62.831 66.667 12.47 0.00 44.76 2.74
288 289 4.830765 TCACGCGGCCAGCCATAC 62.831 66.667 12.47 0.00 44.76 2.39
292 293 3.508840 GCGGCCAGCCATACACAC 61.509 66.667 9.78 0.00 40.81 3.82
293 294 2.046411 CGGCCAGCCATACACACA 60.046 61.111 9.78 0.00 35.37 3.72
294 295 2.398554 CGGCCAGCCATACACACAC 61.399 63.158 9.78 0.00 35.37 3.82
295 296 1.303236 GGCCAGCCATACACACACA 60.303 57.895 3.12 0.00 35.81 3.72
296 297 0.893270 GGCCAGCCATACACACACAA 60.893 55.000 3.12 0.00 35.81 3.33
297 298 1.176527 GCCAGCCATACACACACAAT 58.823 50.000 0.00 0.00 0.00 2.71
298 299 1.133025 GCCAGCCATACACACACAATC 59.867 52.381 0.00 0.00 0.00 2.67
299 300 2.435422 CCAGCCATACACACACAATCA 58.565 47.619 0.00 0.00 0.00 2.57
300 301 2.819019 CCAGCCATACACACACAATCAA 59.181 45.455 0.00 0.00 0.00 2.57
301 302 3.366273 CCAGCCATACACACACAATCAAC 60.366 47.826 0.00 0.00 0.00 3.18
302 303 3.252944 CAGCCATACACACACAATCAACA 59.747 43.478 0.00 0.00 0.00 3.33
303 304 4.081406 AGCCATACACACACAATCAACAT 58.919 39.130 0.00 0.00 0.00 2.71
304 305 5.123661 CAGCCATACACACACAATCAACATA 59.876 40.000 0.00 0.00 0.00 2.29
305 306 5.887598 AGCCATACACACACAATCAACATAT 59.112 36.000 0.00 0.00 0.00 1.78
306 307 6.038603 AGCCATACACACACAATCAACATATC 59.961 38.462 0.00 0.00 0.00 1.63
307 308 6.728200 CCATACACACACAATCAACATATCC 58.272 40.000 0.00 0.00 0.00 2.59
308 309 4.944962 ACACACACAATCAACATATCCG 57.055 40.909 0.00 0.00 0.00 4.18
309 310 4.323417 ACACACACAATCAACATATCCGT 58.677 39.130 0.00 0.00 0.00 4.69
310 311 4.154015 ACACACACAATCAACATATCCGTG 59.846 41.667 0.00 0.00 0.00 4.94
311 312 4.391523 CACACACAATCAACATATCCGTGA 59.608 41.667 0.00 0.00 0.00 4.35
312 313 5.065090 CACACACAATCAACATATCCGTGAT 59.935 40.000 0.00 0.00 0.00 3.06
313 314 5.065090 ACACACAATCAACATATCCGTGATG 59.935 40.000 0.00 0.00 0.00 3.07
314 315 5.294060 CACACAATCAACATATCCGTGATGA 59.706 40.000 0.00 0.00 35.73 2.92
315 316 5.525012 ACACAATCAACATATCCGTGATGAG 59.475 40.000 0.00 0.00 34.92 2.90
316 317 5.754890 CACAATCAACATATCCGTGATGAGA 59.245 40.000 0.00 0.00 34.92 3.27
317 318 6.258507 CACAATCAACATATCCGTGATGAGAA 59.741 38.462 0.00 0.00 34.92 2.87
318 319 6.994496 ACAATCAACATATCCGTGATGAGAAT 59.006 34.615 0.00 0.00 34.92 2.40
319 320 7.500227 ACAATCAACATATCCGTGATGAGAATT 59.500 33.333 0.00 0.00 34.92 2.17
320 321 7.664082 ATCAACATATCCGTGATGAGAATTC 57.336 36.000 0.00 0.00 34.92 2.17
321 322 6.820335 TCAACATATCCGTGATGAGAATTCT 58.180 36.000 7.95 7.95 0.00 2.40
322 323 7.951591 TCAACATATCCGTGATGAGAATTCTA 58.048 34.615 8.25 0.00 0.00 2.10
323 324 8.421002 TCAACATATCCGTGATGAGAATTCTAA 58.579 33.333 8.25 0.17 0.00 2.10
324 325 8.491152 CAACATATCCGTGATGAGAATTCTAAC 58.509 37.037 8.25 4.19 0.00 2.34
325 326 6.863645 ACATATCCGTGATGAGAATTCTAACG 59.136 38.462 8.25 14.95 0.00 3.18
326 327 4.713824 TCCGTGATGAGAATTCTAACGT 57.286 40.909 21.24 9.22 0.00 3.99
327 328 5.823209 TCCGTGATGAGAATTCTAACGTA 57.177 39.130 21.24 10.60 0.00 3.57
328 329 6.198650 TCCGTGATGAGAATTCTAACGTAA 57.801 37.500 21.24 12.28 0.00 3.18
329 330 6.623486 TCCGTGATGAGAATTCTAACGTAAA 58.377 36.000 21.24 10.68 0.00 2.01
330 331 6.750501 TCCGTGATGAGAATTCTAACGTAAAG 59.249 38.462 21.24 12.08 0.00 1.85
331 332 6.019801 CCGTGATGAGAATTCTAACGTAAAGG 60.020 42.308 21.24 9.87 0.00 3.11
332 333 6.750501 CGTGATGAGAATTCTAACGTAAAGGA 59.249 38.462 8.25 0.00 0.00 3.36
333 334 7.253684 CGTGATGAGAATTCTAACGTAAAGGAC 60.254 40.741 8.25 0.00 0.00 3.85
334 335 7.544566 GTGATGAGAATTCTAACGTAAAGGACA 59.455 37.037 8.25 0.00 0.00 4.02
335 336 8.092068 TGATGAGAATTCTAACGTAAAGGACAA 58.908 33.333 8.25 0.00 0.00 3.18
336 337 7.884816 TGAGAATTCTAACGTAAAGGACAAG 57.115 36.000 8.25 0.00 0.00 3.16
337 338 6.367969 TGAGAATTCTAACGTAAAGGACAAGC 59.632 38.462 8.25 0.00 0.00 4.01
338 339 5.642491 AGAATTCTAACGTAAAGGACAAGCC 59.358 40.000 6.06 0.00 0.00 4.35
339 340 2.950433 TCTAACGTAAAGGACAAGCCG 58.050 47.619 0.00 0.00 43.43 5.52
340 341 2.297033 TCTAACGTAAAGGACAAGCCGT 59.703 45.455 0.00 0.00 43.43 5.68
341 342 1.223187 AACGTAAAGGACAAGCCGTG 58.777 50.000 0.00 0.00 43.43 4.94
342 343 0.105408 ACGTAAAGGACAAGCCGTGT 59.895 50.000 0.00 0.00 45.74 4.49
343 344 0.511221 CGTAAAGGACAAGCCGTGTG 59.489 55.000 0.00 0.00 41.96 3.82
344 345 1.870580 CGTAAAGGACAAGCCGTGTGA 60.871 52.381 0.00 0.00 41.96 3.58
345 346 2.215196 GTAAAGGACAAGCCGTGTGAA 58.785 47.619 0.00 0.00 41.96 3.18
346 347 1.308998 AAAGGACAAGCCGTGTGAAG 58.691 50.000 0.00 0.00 41.96 3.02
347 348 0.468226 AAGGACAAGCCGTGTGAAGA 59.532 50.000 0.00 0.00 41.96 2.87
348 349 0.468226 AGGACAAGCCGTGTGAAGAA 59.532 50.000 0.00 0.00 41.96 2.52
349 350 0.586802 GGACAAGCCGTGTGAAGAAC 59.413 55.000 0.00 0.00 41.96 3.01
350 351 1.583054 GACAAGCCGTGTGAAGAACT 58.417 50.000 0.00 0.00 41.96 3.01
351 352 1.940613 GACAAGCCGTGTGAAGAACTT 59.059 47.619 0.00 0.00 41.96 2.66
352 353 3.128349 GACAAGCCGTGTGAAGAACTTA 58.872 45.455 0.00 0.00 41.96 2.24
353 354 2.870411 ACAAGCCGTGTGAAGAACTTAC 59.130 45.455 0.00 0.00 39.72 2.34
354 355 2.869801 CAAGCCGTGTGAAGAACTTACA 59.130 45.455 0.00 0.00 0.00 2.41
355 356 3.402628 AGCCGTGTGAAGAACTTACAT 57.597 42.857 0.00 0.00 0.00 2.29
356 357 3.740115 AGCCGTGTGAAGAACTTACATT 58.260 40.909 0.00 0.00 0.00 2.71
357 358 4.134563 AGCCGTGTGAAGAACTTACATTT 58.865 39.130 0.00 0.00 0.00 2.32
358 359 5.302360 AGCCGTGTGAAGAACTTACATTTA 58.698 37.500 0.00 0.00 0.00 1.40
359 360 5.408604 AGCCGTGTGAAGAACTTACATTTAG 59.591 40.000 0.00 0.00 0.00 1.85
360 361 5.390567 GCCGTGTGAAGAACTTACATTTAGG 60.391 44.000 0.00 0.00 0.00 2.69
361 362 5.390567 CCGTGTGAAGAACTTACATTTAGGC 60.391 44.000 0.00 0.00 0.00 3.93
362 363 5.408604 CGTGTGAAGAACTTACATTTAGGCT 59.591 40.000 0.00 0.00 0.00 4.58
363 364 6.401153 CGTGTGAAGAACTTACATTTAGGCTC 60.401 42.308 0.00 0.00 0.00 4.70
364 365 5.637810 TGTGAAGAACTTACATTTAGGCTCG 59.362 40.000 0.00 0.00 0.00 5.03
365 366 5.867716 GTGAAGAACTTACATTTAGGCTCGA 59.132 40.000 0.00 0.00 0.00 4.04
366 367 5.867716 TGAAGAACTTACATTTAGGCTCGAC 59.132 40.000 0.00 0.00 0.00 4.20
367 368 5.401531 AGAACTTACATTTAGGCTCGACA 57.598 39.130 0.00 0.00 0.00 4.35
368 369 5.978814 AGAACTTACATTTAGGCTCGACAT 58.021 37.500 0.00 0.00 0.00 3.06
369 370 5.812642 AGAACTTACATTTAGGCTCGACATG 59.187 40.000 0.00 0.00 0.00 3.21
370 371 3.871594 ACTTACATTTAGGCTCGACATGC 59.128 43.478 0.00 0.00 0.00 4.06
371 372 2.698855 ACATTTAGGCTCGACATGCT 57.301 45.000 0.00 0.00 0.00 3.79
372 373 2.991250 ACATTTAGGCTCGACATGCTT 58.009 42.857 0.00 0.00 0.00 3.91
373 374 4.137116 ACATTTAGGCTCGACATGCTTA 57.863 40.909 0.00 0.00 0.00 3.09
374 375 4.513442 ACATTTAGGCTCGACATGCTTAA 58.487 39.130 0.00 0.00 31.69 1.85
375 376 4.332819 ACATTTAGGCTCGACATGCTTAAC 59.667 41.667 0.00 0.00 32.96 2.01
376 377 3.603158 TTAGGCTCGACATGCTTAACA 57.397 42.857 0.00 0.00 29.21 2.41
377 378 1.726853 AGGCTCGACATGCTTAACAC 58.273 50.000 0.00 0.00 0.00 3.32
378 379 1.001974 AGGCTCGACATGCTTAACACA 59.998 47.619 0.00 0.00 0.00 3.72
379 380 1.804151 GGCTCGACATGCTTAACACAA 59.196 47.619 0.00 0.00 0.00 3.33
380 381 2.225491 GGCTCGACATGCTTAACACAAA 59.775 45.455 0.00 0.00 0.00 2.83
381 382 3.226347 GCTCGACATGCTTAACACAAAC 58.774 45.455 0.00 0.00 0.00 2.93
382 383 3.469629 CTCGACATGCTTAACACAAACG 58.530 45.455 0.00 0.00 0.00 3.60
383 384 1.969256 CGACATGCTTAACACAAACGC 59.031 47.619 0.00 0.00 0.00 4.84
384 385 2.349438 CGACATGCTTAACACAAACGCT 60.349 45.455 0.00 0.00 0.00 5.07
385 386 2.973224 GACATGCTTAACACAAACGCTG 59.027 45.455 0.00 0.00 0.00 5.18
386 387 1.715519 CATGCTTAACACAAACGCTGC 59.284 47.619 0.00 0.00 0.00 5.25
387 388 0.030101 TGCTTAACACAAACGCTGCC 59.970 50.000 0.00 0.00 0.00 4.85
393 394 1.792006 ACACAAACGCTGCCTACTAC 58.208 50.000 0.00 0.00 0.00 2.73
395 396 2.139917 CACAAACGCTGCCTACTACAA 58.860 47.619 0.00 0.00 0.00 2.41
407 408 3.435671 GCCTACTACAACACCACATCAAC 59.564 47.826 0.00 0.00 0.00 3.18
438 439 6.721571 TCTTCCGAATAAATGACACTTCAC 57.278 37.500 0.00 0.00 33.38 3.18
453 454 9.793252 ATGACACTTCACATAAAAATATCAAGC 57.207 29.630 0.00 0.00 33.38 4.01
511 516 9.365906 TGCTCATCCAAATATACACCAATAAAT 57.634 29.630 0.00 0.00 0.00 1.40
524 529 4.734854 CACCAATAAATCTCAAAATCGCCG 59.265 41.667 0.00 0.00 0.00 6.46
529 534 3.885484 AATCTCAAAATCGCCGCATAG 57.115 42.857 0.00 0.00 0.00 2.23
537 542 4.468095 AAATCGCCGCATAGTATGAAAC 57.532 40.909 14.52 0.99 0.00 2.78
543 548 4.376413 CGCCGCATAGTATGAAACAGATTC 60.376 45.833 14.52 0.00 38.60 2.52
582 587 8.807118 ACTTGACTCTACAGAATAAATGACAGA 58.193 33.333 0.00 0.00 0.00 3.41
584 589 8.354711 TGACTCTACAGAATAAATGACAGAGT 57.645 34.615 11.80 11.80 41.67 3.24
585 590 9.462606 TGACTCTACAGAATAAATGACAGAGTA 57.537 33.333 11.89 0.00 40.41 2.59
599 604 5.316167 TGACAGAGTATTGCCACAAAAGAT 58.684 37.500 0.00 0.00 0.00 2.40
602 607 5.948162 ACAGAGTATTGCCACAAAAGATGAT 59.052 36.000 0.00 0.00 0.00 2.45
608 613 2.562298 TGCCACAAAAGATGATTCCACC 59.438 45.455 0.00 0.00 0.00 4.61
626 631 3.517602 CACCGAATAAATGACACCTCGA 58.482 45.455 0.00 0.00 0.00 4.04
627 632 3.306166 CACCGAATAAATGACACCTCGAC 59.694 47.826 0.00 0.00 0.00 4.20
628 633 2.534349 CCGAATAAATGACACCTCGACG 59.466 50.000 0.00 0.00 0.00 5.12
629 634 3.431856 CGAATAAATGACACCTCGACGA 58.568 45.455 0.00 0.00 0.00 4.20
630 635 4.042398 CGAATAAATGACACCTCGACGAT 58.958 43.478 0.00 0.00 0.00 3.73
631 636 5.209977 CGAATAAATGACACCTCGACGATA 58.790 41.667 0.00 0.00 0.00 2.92
649 654 8.953313 TCGACGATATACATACAAATATCTGGT 58.047 33.333 0.00 0.00 34.35 4.00
658 663 8.812147 ACATACAAATATCTGGTACACGTATG 57.188 34.615 0.00 0.00 39.53 2.39
668 673 5.102953 TGGTACACGTATGGAGTACTACT 57.897 43.478 6.66 0.00 38.47 2.57
669 674 6.098266 TCTGGTACACGTATGGAGTACTACTA 59.902 42.308 6.66 0.00 38.47 1.82
670 675 6.049149 TGGTACACGTATGGAGTACTACTAC 58.951 44.000 6.66 5.76 38.47 2.73
671 676 5.175856 GGTACACGTATGGAGTACTACTACG 59.824 48.000 23.87 23.87 40.59 3.51
672 677 4.122776 ACACGTATGGAGTACTACTACGG 58.877 47.826 26.62 20.78 39.45 4.02
673 678 4.141937 ACACGTATGGAGTACTACTACGGA 60.142 45.833 26.62 3.89 39.45 4.69
674 679 4.811024 CACGTATGGAGTACTACTACGGAA 59.189 45.833 26.62 3.28 39.45 4.30
675 680 5.294306 CACGTATGGAGTACTACTACGGAAA 59.706 44.000 26.62 2.67 39.45 3.13
676 681 6.017605 CACGTATGGAGTACTACTACGGAAAT 60.018 42.308 26.62 13.01 39.45 2.17
677 682 7.171508 CACGTATGGAGTACTACTACGGAAATA 59.828 40.741 26.62 7.99 39.45 1.40
678 683 7.171678 ACGTATGGAGTACTACTACGGAAATAC 59.828 40.741 26.62 15.72 39.45 1.89
679 684 7.386299 CGTATGGAGTACTACTACGGAAATACT 59.614 40.741 20.50 0.00 29.34 2.12
682 687 8.668510 TGGAGTACTACTACGGAAATACTTAG 57.331 38.462 6.66 0.00 29.34 2.18
750 755 0.459585 GAACAGCTCGAATACCGCCA 60.460 55.000 0.00 0.00 38.37 5.69
847 860 1.202098 ACAAGAACGTGCGTCCAAAAC 60.202 47.619 0.00 0.00 0.00 2.43
924 947 1.151777 ATCACGATAACGCAAGCCGG 61.152 55.000 0.00 0.00 43.96 6.13
1142 1177 4.467084 GCACCCGGAGCCATCGAA 62.467 66.667 0.73 0.00 0.00 3.71
1143 1178 2.511600 CACCCGGAGCCATCGAAC 60.512 66.667 0.73 0.00 0.00 3.95
1736 3915 0.249615 ATGATGATGGACGACGGCAG 60.250 55.000 1.63 0.00 0.00 4.85
1767 3946 1.825191 CCCCAAGCCATGATCACCG 60.825 63.158 0.00 0.00 0.00 4.94
1812 3991 2.821546 TGCTCCATTGCGACTACATAC 58.178 47.619 0.00 0.00 35.36 2.39
1813 3992 2.167487 TGCTCCATTGCGACTACATACA 59.833 45.455 0.00 0.00 35.36 2.29
1814 3993 3.181466 TGCTCCATTGCGACTACATACAT 60.181 43.478 0.00 0.00 35.36 2.29
1816 3995 4.386049 GCTCCATTGCGACTACATACATAC 59.614 45.833 0.00 0.00 0.00 2.39
1820 3999 4.579454 TTGCGACTACATACATACTCCC 57.421 45.455 0.00 0.00 0.00 4.30
1821 4000 3.828921 TGCGACTACATACATACTCCCT 58.171 45.455 0.00 0.00 0.00 4.20
1822 4001 3.819337 TGCGACTACATACATACTCCCTC 59.181 47.826 0.00 0.00 0.00 4.30
1823 4002 3.190953 GCGACTACATACATACTCCCTCC 59.809 52.174 0.00 0.00 0.00 4.30
1824 4003 4.395625 CGACTACATACATACTCCCTCCA 58.604 47.826 0.00 0.00 0.00 3.86
1825 4004 5.010933 CGACTACATACATACTCCCTCCAT 58.989 45.833 0.00 0.00 0.00 3.41
1826 4005 5.477291 CGACTACATACATACTCCCTCCATT 59.523 44.000 0.00 0.00 0.00 3.16
1827 4006 6.015350 CGACTACATACATACTCCCTCCATTT 60.015 42.308 0.00 0.00 0.00 2.32
1828 4007 7.304497 ACTACATACATACTCCCTCCATTTC 57.696 40.000 0.00 0.00 0.00 2.17
1829 4008 6.844388 ACTACATACATACTCCCTCCATTTCA 59.156 38.462 0.00 0.00 0.00 2.69
1830 4009 6.575244 ACATACATACTCCCTCCATTTCAA 57.425 37.500 0.00 0.00 0.00 2.69
1831 4010 6.969043 ACATACATACTCCCTCCATTTCAAA 58.031 36.000 0.00 0.00 0.00 2.69
1832 4011 7.586349 ACATACATACTCCCTCCATTTCAAAT 58.414 34.615 0.00 0.00 0.00 2.32
1833 4012 8.061304 ACATACATACTCCCTCCATTTCAAATT 58.939 33.333 0.00 0.00 0.00 1.82
1834 4013 9.573166 CATACATACTCCCTCCATTTCAAATTA 57.427 33.333 0.00 0.00 0.00 1.40
1835 4014 7.881775 ACATACTCCCTCCATTTCAAATTAC 57.118 36.000 0.00 0.00 0.00 1.89
1836 4015 7.643123 ACATACTCCCTCCATTTCAAATTACT 58.357 34.615 0.00 0.00 0.00 2.24
1837 4016 7.775561 ACATACTCCCTCCATTTCAAATTACTC 59.224 37.037 0.00 0.00 0.00 2.59
1838 4017 5.186198 ACTCCCTCCATTTCAAATTACTCG 58.814 41.667 0.00 0.00 0.00 4.18
1839 4018 5.174037 TCCCTCCATTTCAAATTACTCGT 57.826 39.130 0.00 0.00 0.00 4.18
1840 4019 5.183228 TCCCTCCATTTCAAATTACTCGTC 58.817 41.667 0.00 0.00 0.00 4.20
1841 4020 4.034048 CCCTCCATTTCAAATTACTCGTCG 59.966 45.833 0.00 0.00 0.00 5.12
1842 4021 4.494199 CCTCCATTTCAAATTACTCGTCGC 60.494 45.833 0.00 0.00 0.00 5.19
1843 4022 3.997681 TCCATTTCAAATTACTCGTCGCA 59.002 39.130 0.00 0.00 0.00 5.10
1844 4023 4.452795 TCCATTTCAAATTACTCGTCGCAA 59.547 37.500 0.00 0.00 0.00 4.85
1845 4024 5.049336 TCCATTTCAAATTACTCGTCGCAAA 60.049 36.000 0.00 0.00 0.00 3.68
1846 4025 5.627367 CCATTTCAAATTACTCGTCGCAAAA 59.373 36.000 0.00 0.00 0.00 2.44
1847 4026 6.143118 CCATTTCAAATTACTCGTCGCAAAAA 59.857 34.615 0.00 0.00 0.00 1.94
1848 4027 7.148820 CCATTTCAAATTACTCGTCGCAAAAAT 60.149 33.333 0.00 0.00 0.00 1.82
1849 4028 8.845648 CATTTCAAATTACTCGTCGCAAAAATA 58.154 29.630 0.00 0.00 0.00 1.40
1850 4029 8.429739 TTTCAAATTACTCGTCGCAAAAATAG 57.570 30.769 0.00 0.00 0.00 1.73
1851 4030 7.354025 TCAAATTACTCGTCGCAAAAATAGA 57.646 32.000 0.00 0.00 0.00 1.98
1852 4031 7.970384 TCAAATTACTCGTCGCAAAAATAGAT 58.030 30.769 0.00 0.00 0.00 1.98
1853 4032 9.089601 TCAAATTACTCGTCGCAAAAATAGATA 57.910 29.630 0.00 0.00 0.00 1.98
1854 4033 9.864034 CAAATTACTCGTCGCAAAAATAGATAT 57.136 29.630 0.00 0.00 0.00 1.63
1907 4086 9.566530 CATCTACTTCTATGATGAGTAATTCGG 57.433 37.037 0.00 0.00 39.72 4.30
1908 4087 8.919777 TCTACTTCTATGATGAGTAATTCGGA 57.080 34.615 0.00 0.00 0.00 4.55
1909 4088 9.350951 TCTACTTCTATGATGAGTAATTCGGAA 57.649 33.333 0.00 0.00 0.00 4.30
1910 4089 9.967346 CTACTTCTATGATGAGTAATTCGGAAA 57.033 33.333 0.00 0.00 0.00 3.13
1911 4090 8.649973 ACTTCTATGATGAGTAATTCGGAAAC 57.350 34.615 0.00 0.00 0.00 2.78
1926 4105 3.604875 GGAAACGGAGGAAGTACATGA 57.395 47.619 0.00 0.00 0.00 3.07
1927 4106 4.138487 GGAAACGGAGGAAGTACATGAT 57.862 45.455 0.00 0.00 0.00 2.45
1928 4107 5.272283 GGAAACGGAGGAAGTACATGATA 57.728 43.478 0.00 0.00 0.00 2.15
1929 4108 5.667466 GGAAACGGAGGAAGTACATGATAA 58.333 41.667 0.00 0.00 0.00 1.75
1930 4109 6.110707 GGAAACGGAGGAAGTACATGATAAA 58.889 40.000 0.00 0.00 0.00 1.40
1931 4110 6.766467 GGAAACGGAGGAAGTACATGATAAAT 59.234 38.462 0.00 0.00 0.00 1.40
1932 4111 7.041984 GGAAACGGAGGAAGTACATGATAAATC 60.042 40.741 0.00 0.00 0.00 2.17
1933 4112 6.732896 ACGGAGGAAGTACATGATAAATCT 57.267 37.500 0.00 0.00 0.00 2.40
1934 4113 6.750148 ACGGAGGAAGTACATGATAAATCTC 58.250 40.000 0.00 0.00 0.00 2.75
1941 4120 9.774742 GGAAGTACATGATAAATCTCACAAAAC 57.225 33.333 0.00 0.00 0.00 2.43
1957 4136 6.186785 TCACAAAACGAGTTCAATAAACGAC 58.813 36.000 0.00 0.00 43.02 4.34
1965 4163 7.033791 ACGAGTTCAATAAACGACATACATCT 58.966 34.615 0.00 0.00 43.02 2.90
2044 4248 1.799994 TCACAATGTGCAGATGTCGTG 59.200 47.619 8.78 12.49 32.98 4.35
2062 4266 6.274579 TGTCGTGTTGTACTGTTCATCTAAA 58.725 36.000 0.00 0.00 0.00 1.85
2088 4292 2.859538 TCGTTTTGTCGTCGCTAAACTT 59.140 40.909 17.08 0.00 33.93 2.66
2089 4293 3.061006 TCGTTTTGTCGTCGCTAAACTTC 60.061 43.478 17.08 4.21 33.93 3.01
2090 4294 3.060740 CGTTTTGTCGTCGCTAAACTTCT 60.061 43.478 17.08 0.00 33.93 2.85
2093 4297 1.336517 TGTCGTCGCTAAACTTCTGGG 60.337 52.381 0.00 0.00 0.00 4.45
2120 4331 6.372185 CAGTCCTTATCCTCGTTATTACTCG 58.628 44.000 0.00 0.00 0.00 4.18
2126 4337 2.031314 TCCTCGTTATTACTCGTCGCTG 59.969 50.000 0.00 0.00 0.00 5.18
2133 4344 0.387622 TTACTCGTCGCTGGTTTCCG 60.388 55.000 0.00 0.00 0.00 4.30
2135 4346 2.049802 TCGTCGCTGGTTTCCGTC 60.050 61.111 0.00 0.00 0.00 4.79
2144 4355 3.374058 CGCTGGTTTCCGTCAGATATTTT 59.626 43.478 0.00 0.00 33.11 1.82
2150 4361 2.639065 TCCGTCAGATATTTTGCACCC 58.361 47.619 0.00 0.00 0.00 4.61
2197 4408 1.956170 CGCGCTGTTCCTGTTCACT 60.956 57.895 5.56 0.00 0.00 3.41
2206 4417 4.055360 TGTTCCTGTTCACTATCACAACG 58.945 43.478 0.00 0.00 0.00 4.10
2214 4425 1.135689 CACTATCACAACGCCAAAGCC 60.136 52.381 0.00 0.00 34.57 4.35
2230 4441 4.580167 CCAAAGCCGATAAAGATTGGATCA 59.420 41.667 0.00 0.00 38.81 2.92
2232 4443 3.393800 AGCCGATAAAGATTGGATCACG 58.606 45.455 0.00 0.00 38.81 4.35
2233 4444 2.096218 GCCGATAAAGATTGGATCACGC 60.096 50.000 0.00 0.00 38.81 5.34
2234 4445 2.480419 CCGATAAAGATTGGATCACGCC 59.520 50.000 0.00 0.00 38.81 5.68
2235 4446 3.130633 CGATAAAGATTGGATCACGCCA 58.869 45.455 0.00 0.00 35.78 5.69
2236 4447 3.748048 CGATAAAGATTGGATCACGCCAT 59.252 43.478 0.00 0.00 37.86 4.40
2237 4448 4.377738 CGATAAAGATTGGATCACGCCATG 60.378 45.833 0.00 0.00 37.86 3.66
2342 4553 3.686726 GCTCCACTTTTGACCACAGATAG 59.313 47.826 0.00 0.00 0.00 2.08
2343 4554 3.674997 TCCACTTTTGACCACAGATAGC 58.325 45.455 0.00 0.00 0.00 2.97
2344 4555 3.327757 TCCACTTTTGACCACAGATAGCT 59.672 43.478 0.00 0.00 0.00 3.32
2345 4556 3.686726 CCACTTTTGACCACAGATAGCTC 59.313 47.826 0.00 0.00 0.00 4.09
2346 4557 4.318332 CACTTTTGACCACAGATAGCTCA 58.682 43.478 0.00 0.00 0.00 4.26
2360 4571 0.036010 AGCTCACTTTCCACCGGATG 60.036 55.000 9.46 2.15 0.00 3.51
2380 4595 7.454260 GGATGGATCCATGGAAAATAAGTAC 57.546 40.000 32.05 11.87 46.38 2.73
2381 4596 6.434340 GGATGGATCCATGGAAAATAAGTACC 59.566 42.308 32.05 16.93 46.38 3.34
2383 4598 6.736581 TGGATCCATGGAAAATAAGTACCAA 58.263 36.000 20.67 0.00 36.00 3.67
2384 4599 6.833416 TGGATCCATGGAAAATAAGTACCAAG 59.167 38.462 20.67 0.00 36.00 3.61
2385 4600 6.833933 GGATCCATGGAAAATAAGTACCAAGT 59.166 38.462 20.67 0.00 36.00 3.16
2386 4601 7.201821 GGATCCATGGAAAATAAGTACCAAGTG 60.202 40.741 20.67 0.00 36.00 3.16
2428 4643 1.270625 TGTACTCCGACTTGCTTTGGG 60.271 52.381 0.00 0.00 0.00 4.12
2485 4700 4.776837 TGGTCCAAATCCAATGCAAAGTAT 59.223 37.500 0.00 0.00 31.50 2.12
2486 4701 5.954752 TGGTCCAAATCCAATGCAAAGTATA 59.045 36.000 0.00 0.00 31.50 1.47
2490 4864 7.436080 GTCCAAATCCAATGCAAAGTATACATG 59.564 37.037 5.50 5.06 0.00 3.21
2497 4871 5.602458 ATGCAAAGTATACATGCTCGATG 57.398 39.130 24.95 3.79 40.66 3.84
2507 4881 0.395686 ATGCTCGATGTGGATCCCAG 59.604 55.000 9.90 0.00 32.34 4.45
2508 4882 0.687427 TGCTCGATGTGGATCCCAGA 60.687 55.000 9.90 0.57 32.34 3.86
2509 4883 0.465705 GCTCGATGTGGATCCCAGAA 59.534 55.000 9.90 0.00 32.34 3.02
2510 4884 1.539929 GCTCGATGTGGATCCCAGAAG 60.540 57.143 9.90 7.01 32.34 2.85
2511 4885 0.465705 TCGATGTGGATCCCAGAAGC 59.534 55.000 9.90 0.00 32.34 3.86
2546 4926 3.310860 AACGCCGGTCTGTCATCCC 62.311 63.158 1.90 0.00 0.00 3.85
2573 4953 0.250989 TCCCCTGTAAACAAAGGCCG 60.251 55.000 0.00 0.00 31.71 6.13
2622 5002 3.869272 GCCGGACAGCGCTGAATG 61.869 66.667 42.03 27.68 0.00 2.67
2626 5006 1.503542 GGACAGCGCTGAATGTTGG 59.496 57.895 42.03 15.17 0.00 3.77
2637 5017 3.810373 CTGAATGTTGGCGTTACTTGAC 58.190 45.455 0.00 0.00 0.00 3.18
2648 5028 3.678662 CGTTACTTGACGTAGAGGCTAC 58.321 50.000 0.00 0.00 38.19 3.58
2655 5035 3.682696 TGACGTAGAGGCTACAGAAAGA 58.317 45.455 5.55 0.00 0.00 2.52
2659 5039 3.242478 CGTAGAGGCTACAGAAAGAGACG 60.242 52.174 5.55 0.00 0.00 4.18
2666 5046 1.571919 ACAGAAAGAGACGTGTGCAC 58.428 50.000 10.75 10.75 0.00 4.57
2671 5051 4.449068 CAGAAAGAGACGTGTGCACTATTT 59.551 41.667 19.41 6.88 0.00 1.40
2673 5053 6.145534 CAGAAAGAGACGTGTGCACTATTTTA 59.854 38.462 19.41 0.00 0.00 1.52
2674 5054 6.874134 AGAAAGAGACGTGTGCACTATTTTAT 59.126 34.615 19.41 4.05 0.00 1.40
2684 5064 9.009327 CGTGTGCACTATTTTATTTTTATCTGG 57.991 33.333 19.41 0.00 0.00 3.86
2698 5078 7.615582 TTTTTATCTGGACAGCTAATGAGTG 57.384 36.000 0.00 0.00 0.00 3.51
2700 5080 1.901833 TCTGGACAGCTAATGAGTGCA 59.098 47.619 0.00 0.00 32.64 4.57
2701 5081 2.005451 CTGGACAGCTAATGAGTGCAC 58.995 52.381 9.40 9.40 30.39 4.57
2702 5082 1.347378 TGGACAGCTAATGAGTGCACA 59.653 47.619 21.04 0.00 0.00 4.57
2703 5083 2.026915 TGGACAGCTAATGAGTGCACAT 60.027 45.455 21.04 1.04 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 8.971073 CCTACCCTTCACATTTCATAAGAAAAT 58.029 33.333 0.00 0.00 46.06 1.82
16 17 8.167392 TCCTACCCTTCACATTTCATAAGAAAA 58.833 33.333 0.00 0.00 46.06 2.29
17 18 7.695055 TCCTACCCTTCACATTTCATAAGAAA 58.305 34.615 0.00 0.00 46.90 2.52
18 19 7.265599 TCCTACCCTTCACATTTCATAAGAA 57.734 36.000 0.00 0.00 0.00 2.52
19 20 6.884472 TCCTACCCTTCACATTTCATAAGA 57.116 37.500 0.00 0.00 0.00 2.10
20 21 7.338710 TCTTCCTACCCTTCACATTTCATAAG 58.661 38.462 0.00 0.00 0.00 1.73
21 22 7.265599 TCTTCCTACCCTTCACATTTCATAA 57.734 36.000 0.00 0.00 0.00 1.90
22 23 6.884472 TCTTCCTACCCTTCACATTTCATA 57.116 37.500 0.00 0.00 0.00 2.15
23 24 5.779241 TCTTCCTACCCTTCACATTTCAT 57.221 39.130 0.00 0.00 0.00 2.57
24 25 5.576563 TTCTTCCTACCCTTCACATTTCA 57.423 39.130 0.00 0.00 0.00 2.69
25 26 6.095580 GGAATTCTTCCTACCCTTCACATTTC 59.904 42.308 5.23 0.00 46.57 2.17
26 27 5.952347 GGAATTCTTCCTACCCTTCACATTT 59.048 40.000 5.23 0.00 46.57 2.32
27 28 5.510430 GGAATTCTTCCTACCCTTCACATT 58.490 41.667 5.23 0.00 46.57 2.71
28 29 5.117406 GGAATTCTTCCTACCCTTCACAT 57.883 43.478 5.23 0.00 46.57 3.21
29 30 4.569719 GGAATTCTTCCTACCCTTCACA 57.430 45.455 5.23 0.00 46.57 3.58
49 50 7.227512 AGCAATGAAATCTTATTCCTACGAAGG 59.772 37.037 0.00 0.00 45.21 3.46
50 51 8.147642 AGCAATGAAATCTTATTCCTACGAAG 57.852 34.615 0.00 0.00 0.00 3.79
51 52 9.778741 ATAGCAATGAAATCTTATTCCTACGAA 57.221 29.630 0.00 0.00 0.00 3.85
62 63 9.034800 TCCTTTGGTTTATAGCAATGAAATCTT 57.965 29.630 10.98 0.00 41.06 2.40
63 64 8.593945 TCCTTTGGTTTATAGCAATGAAATCT 57.406 30.769 10.98 0.00 41.06 2.40
66 67 9.474313 AGTATCCTTTGGTTTATAGCAATGAAA 57.526 29.630 10.98 2.37 41.06 2.69
136 137 8.037166 GCCTTCATTGATTTAGAGGAATTTTGT 58.963 33.333 5.67 0.00 0.00 2.83
137 138 7.493645 GGCCTTCATTGATTTAGAGGAATTTTG 59.506 37.037 0.00 0.00 0.00 2.44
138 139 7.401204 AGGCCTTCATTGATTTAGAGGAATTTT 59.599 33.333 0.00 0.00 0.00 1.82
139 140 6.899631 AGGCCTTCATTGATTTAGAGGAATTT 59.100 34.615 0.00 0.00 0.00 1.82
140 141 6.323225 CAGGCCTTCATTGATTTAGAGGAATT 59.677 38.462 0.00 0.00 0.00 2.17
141 142 5.832060 CAGGCCTTCATTGATTTAGAGGAAT 59.168 40.000 0.00 0.00 0.00 3.01
142 143 5.044919 TCAGGCCTTCATTGATTTAGAGGAA 60.045 40.000 0.00 0.00 0.00 3.36
143 144 4.474651 TCAGGCCTTCATTGATTTAGAGGA 59.525 41.667 0.00 0.00 0.00 3.71
144 145 4.785301 TCAGGCCTTCATTGATTTAGAGG 58.215 43.478 0.00 0.00 0.00 3.69
145 146 5.296283 CACTCAGGCCTTCATTGATTTAGAG 59.704 44.000 0.00 4.46 0.00 2.43
146 147 5.188434 CACTCAGGCCTTCATTGATTTAGA 58.812 41.667 0.00 0.00 0.00 2.10
147 148 4.946157 ACACTCAGGCCTTCATTGATTTAG 59.054 41.667 0.00 0.00 0.00 1.85
148 149 4.701651 CACACTCAGGCCTTCATTGATTTA 59.298 41.667 0.00 0.00 0.00 1.40
149 150 3.508793 CACACTCAGGCCTTCATTGATTT 59.491 43.478 0.00 0.00 0.00 2.17
150 151 3.087031 CACACTCAGGCCTTCATTGATT 58.913 45.455 0.00 0.00 0.00 2.57
151 152 2.040813 ACACACTCAGGCCTTCATTGAT 59.959 45.455 0.00 0.00 0.00 2.57
152 153 1.421268 ACACACTCAGGCCTTCATTGA 59.579 47.619 0.00 0.00 0.00 2.57
153 154 1.808945 GACACACTCAGGCCTTCATTG 59.191 52.381 0.00 0.00 0.00 2.82
154 155 1.701847 AGACACACTCAGGCCTTCATT 59.298 47.619 0.00 0.00 0.00 2.57
155 156 1.356124 AGACACACTCAGGCCTTCAT 58.644 50.000 0.00 0.00 0.00 2.57
156 157 1.895798 CTAGACACACTCAGGCCTTCA 59.104 52.381 0.00 0.00 0.00 3.02
157 158 1.404851 GCTAGACACACTCAGGCCTTC 60.405 57.143 0.00 0.00 0.00 3.46
158 159 0.610687 GCTAGACACACTCAGGCCTT 59.389 55.000 0.00 0.00 0.00 4.35
159 160 0.542938 TGCTAGACACACTCAGGCCT 60.543 55.000 0.00 0.00 0.00 5.19
160 161 0.108424 CTGCTAGACACACTCAGGCC 60.108 60.000 0.00 0.00 0.00 5.19
161 162 0.739112 GCTGCTAGACACACTCAGGC 60.739 60.000 0.00 0.00 0.00 4.85
162 163 0.108424 GGCTGCTAGACACACTCAGG 60.108 60.000 0.00 0.00 0.00 3.86
163 164 0.605083 TGGCTGCTAGACACACTCAG 59.395 55.000 0.00 0.00 0.00 3.35
164 165 2.745379 TGGCTGCTAGACACACTCA 58.255 52.632 0.00 0.00 0.00 3.41
170 171 0.692476 AACCATGTGGCTGCTAGACA 59.308 50.000 0.00 0.80 39.32 3.41
171 172 1.740025 GAAACCATGTGGCTGCTAGAC 59.260 52.381 0.00 0.00 39.32 2.59
172 173 1.350684 TGAAACCATGTGGCTGCTAGA 59.649 47.619 0.00 0.00 39.32 2.43
173 174 1.825090 TGAAACCATGTGGCTGCTAG 58.175 50.000 0.00 0.00 39.32 3.42
174 175 2.284754 TTGAAACCATGTGGCTGCTA 57.715 45.000 0.00 0.00 39.32 3.49
175 176 1.412079 TTTGAAACCATGTGGCTGCT 58.588 45.000 0.00 0.00 39.32 4.24
176 177 2.460757 ATTTGAAACCATGTGGCTGC 57.539 45.000 0.00 0.00 39.32 5.25
177 178 3.514645 GCTATTTGAAACCATGTGGCTG 58.485 45.455 0.00 0.00 39.32 4.85
178 179 2.164219 CGCTATTTGAAACCATGTGGCT 59.836 45.455 0.00 0.00 39.32 4.75
179 180 2.163412 TCGCTATTTGAAACCATGTGGC 59.837 45.455 0.00 0.00 39.32 5.01
180 181 3.727673 CGTCGCTATTTGAAACCATGTGG 60.728 47.826 0.00 0.00 42.17 4.17
181 182 3.416277 CGTCGCTATTTGAAACCATGTG 58.584 45.455 0.00 0.00 0.00 3.21
182 183 2.418628 CCGTCGCTATTTGAAACCATGT 59.581 45.455 0.00 0.00 0.00 3.21
183 184 2.223249 CCCGTCGCTATTTGAAACCATG 60.223 50.000 0.00 0.00 0.00 3.66
184 185 2.014128 CCCGTCGCTATTTGAAACCAT 58.986 47.619 0.00 0.00 0.00 3.55
185 186 1.444836 CCCGTCGCTATTTGAAACCA 58.555 50.000 0.00 0.00 0.00 3.67
186 187 0.730840 CCCCGTCGCTATTTGAAACC 59.269 55.000 0.00 0.00 0.00 3.27
187 188 1.729284 TCCCCGTCGCTATTTGAAAC 58.271 50.000 0.00 0.00 0.00 2.78
188 189 2.476126 TTCCCCGTCGCTATTTGAAA 57.524 45.000 0.00 0.00 0.00 2.69
189 190 2.702592 ATTCCCCGTCGCTATTTGAA 57.297 45.000 0.00 0.00 0.00 2.69
190 191 2.547218 GCTATTCCCCGTCGCTATTTGA 60.547 50.000 0.00 0.00 0.00 2.69
191 192 1.798813 GCTATTCCCCGTCGCTATTTG 59.201 52.381 0.00 0.00 0.00 2.32
192 193 1.414919 TGCTATTCCCCGTCGCTATTT 59.585 47.619 0.00 0.00 0.00 1.40
193 194 1.000955 CTGCTATTCCCCGTCGCTATT 59.999 52.381 0.00 0.00 0.00 1.73
194 195 0.603569 CTGCTATTCCCCGTCGCTAT 59.396 55.000 0.00 0.00 0.00 2.97
195 196 0.754217 ACTGCTATTCCCCGTCGCTA 60.754 55.000 0.00 0.00 0.00 4.26
196 197 2.017559 GACTGCTATTCCCCGTCGCT 62.018 60.000 0.00 0.00 0.00 4.93
197 198 1.591863 GACTGCTATTCCCCGTCGC 60.592 63.158 0.00 0.00 0.00 5.19
198 199 0.460311 AAGACTGCTATTCCCCGTCG 59.540 55.000 0.00 0.00 0.00 5.12
199 200 1.536284 CGAAGACTGCTATTCCCCGTC 60.536 57.143 0.00 0.00 0.00 4.79
200 201 0.460311 CGAAGACTGCTATTCCCCGT 59.540 55.000 0.00 0.00 0.00 5.28
201 202 0.876342 GCGAAGACTGCTATTCCCCG 60.876 60.000 0.00 0.00 0.00 5.73
202 203 0.178068 TGCGAAGACTGCTATTCCCC 59.822 55.000 0.00 0.00 0.00 4.81
203 204 2.024176 TTGCGAAGACTGCTATTCCC 57.976 50.000 0.00 0.00 0.00 3.97
204 205 2.352960 CCTTTGCGAAGACTGCTATTCC 59.647 50.000 15.72 0.00 34.71 3.01
205 206 3.003480 ACCTTTGCGAAGACTGCTATTC 58.997 45.455 15.72 0.00 34.71 1.75
206 207 3.059352 ACCTTTGCGAAGACTGCTATT 57.941 42.857 15.72 0.00 34.71 1.73
207 208 2.770164 ACCTTTGCGAAGACTGCTAT 57.230 45.000 15.72 0.00 34.71 2.97
208 209 2.094182 CCTACCTTTGCGAAGACTGCTA 60.094 50.000 15.72 0.00 34.71 3.49
209 210 1.338200 CCTACCTTTGCGAAGACTGCT 60.338 52.381 15.72 0.00 34.71 4.24
210 211 1.079503 CCTACCTTTGCGAAGACTGC 58.920 55.000 15.72 0.00 34.71 4.40
211 212 2.288825 TGACCTACCTTTGCGAAGACTG 60.289 50.000 15.72 1.07 34.71 3.51
212 213 1.968493 TGACCTACCTTTGCGAAGACT 59.032 47.619 15.72 2.37 34.71 3.24
213 214 2.067013 GTGACCTACCTTTGCGAAGAC 58.933 52.381 15.72 0.00 34.71 3.01
214 215 1.336517 CGTGACCTACCTTTGCGAAGA 60.337 52.381 15.72 0.00 34.71 2.87
215 216 1.068474 CGTGACCTACCTTTGCGAAG 58.932 55.000 6.73 6.73 0.00 3.79
216 217 0.320073 CCGTGACCTACCTTTGCGAA 60.320 55.000 0.00 0.00 0.00 4.70
217 218 1.290955 CCGTGACCTACCTTTGCGA 59.709 57.895 0.00 0.00 0.00 5.10
218 219 0.601841 AACCGTGACCTACCTTTGCG 60.602 55.000 0.00 0.00 0.00 4.85
219 220 1.534163 GAAACCGTGACCTACCTTTGC 59.466 52.381 0.00 0.00 0.00 3.68
220 221 2.148768 GGAAACCGTGACCTACCTTTG 58.851 52.381 0.00 0.00 0.00 2.77
221 222 1.270465 CGGAAACCGTGACCTACCTTT 60.270 52.381 1.80 0.00 42.73 3.11
222 223 0.319405 CGGAAACCGTGACCTACCTT 59.681 55.000 1.80 0.00 42.73 3.50
223 224 1.538687 CCGGAAACCGTGACCTACCT 61.539 60.000 0.00 0.00 46.80 3.08
224 225 1.079612 CCGGAAACCGTGACCTACC 60.080 63.158 0.00 0.00 46.80 3.18
225 226 0.668401 CACCGGAAACCGTGACCTAC 60.668 60.000 9.46 0.00 46.80 3.18
226 227 1.667151 CACCGGAAACCGTGACCTA 59.333 57.895 9.46 0.00 46.80 3.08
227 228 2.424302 CACCGGAAACCGTGACCT 59.576 61.111 9.46 0.00 46.80 3.85
228 229 3.351416 GCACCGGAAACCGTGACC 61.351 66.667 9.46 0.00 46.80 4.02
229 230 1.890510 AAGCACCGGAAACCGTGAC 60.891 57.895 9.46 0.00 46.80 3.67
230 231 1.890041 CAAGCACCGGAAACCGTGA 60.890 57.895 9.46 0.00 46.80 4.35
231 232 2.637025 CAAGCACCGGAAACCGTG 59.363 61.111 9.46 0.00 46.80 4.94
232 233 2.593436 CCAAGCACCGGAAACCGT 60.593 61.111 9.46 0.00 46.80 4.83
234 235 0.322546 ATCTCCAAGCACCGGAAACC 60.323 55.000 9.46 0.00 30.33 3.27
235 236 2.007608 GTATCTCCAAGCACCGGAAAC 58.992 52.381 9.46 0.00 30.33 2.78
236 237 1.626321 TGTATCTCCAAGCACCGGAAA 59.374 47.619 9.46 0.00 30.33 3.13
237 238 1.271856 TGTATCTCCAAGCACCGGAA 58.728 50.000 9.46 0.00 30.33 4.30
238 239 1.496060 ATGTATCTCCAAGCACCGGA 58.504 50.000 9.46 0.00 0.00 5.14
239 240 2.755650 GTATGTATCTCCAAGCACCGG 58.244 52.381 0.00 0.00 0.00 5.28
240 241 2.394708 CGTATGTATCTCCAAGCACCG 58.605 52.381 0.00 0.00 0.00 4.94
241 242 2.102588 ACCGTATGTATCTCCAAGCACC 59.897 50.000 0.00 0.00 0.00 5.01
242 243 3.454371 ACCGTATGTATCTCCAAGCAC 57.546 47.619 0.00 0.00 0.00 4.40
243 244 3.319972 GGTACCGTATGTATCTCCAAGCA 59.680 47.826 0.00 0.00 0.00 3.91
244 245 3.573110 AGGTACCGTATGTATCTCCAAGC 59.427 47.826 6.18 0.00 36.02 4.01
250 251 4.141321 TGACCTGAGGTACCGTATGTATCT 60.141 45.833 2.97 0.00 43.77 1.98
251 252 4.023365 GTGACCTGAGGTACCGTATGTATC 60.023 50.000 2.97 0.00 35.25 2.24
252 253 3.887716 GTGACCTGAGGTACCGTATGTAT 59.112 47.826 2.97 0.00 35.25 2.29
253 254 3.282021 GTGACCTGAGGTACCGTATGTA 58.718 50.000 2.97 0.00 35.25 2.29
254 255 2.097825 GTGACCTGAGGTACCGTATGT 58.902 52.381 2.97 2.96 35.25 2.29
255 256 1.065102 CGTGACCTGAGGTACCGTATG 59.935 57.143 2.97 0.00 35.25 2.39
256 257 1.386533 CGTGACCTGAGGTACCGTAT 58.613 55.000 2.97 0.00 35.25 3.06
257 258 1.308069 GCGTGACCTGAGGTACCGTA 61.308 60.000 19.43 0.00 35.25 4.02
258 259 2.633509 GCGTGACCTGAGGTACCGT 61.634 63.158 19.43 0.00 35.25 4.83
259 260 2.181021 GCGTGACCTGAGGTACCG 59.819 66.667 2.97 11.20 35.25 4.02
260 261 2.181021 CGCGTGACCTGAGGTACC 59.819 66.667 2.97 2.73 35.25 3.34
261 262 2.181021 CCGCGTGACCTGAGGTAC 59.819 66.667 2.97 2.60 35.25 3.34
262 263 3.755628 GCCGCGTGACCTGAGGTA 61.756 66.667 2.97 0.00 35.25 3.08
270 271 4.830765 TATGGCTGGCCGCGTGAC 62.831 66.667 4.92 0.00 40.44 3.67
271 272 4.830765 GTATGGCTGGCCGCGTGA 62.831 66.667 4.92 1.41 40.44 4.35
275 276 3.508840 GTGTGTATGGCTGGCCGC 61.509 66.667 10.60 10.60 39.42 6.53
276 277 2.046411 TGTGTGTATGGCTGGCCG 60.046 61.111 7.14 0.00 39.42 6.13
277 278 0.893270 TTGTGTGTGTATGGCTGGCC 60.893 55.000 4.43 4.43 0.00 5.36
278 279 1.133025 GATTGTGTGTGTATGGCTGGC 59.867 52.381 0.00 0.00 0.00 4.85
279 280 2.435422 TGATTGTGTGTGTATGGCTGG 58.565 47.619 0.00 0.00 0.00 4.85
280 281 3.252944 TGTTGATTGTGTGTGTATGGCTG 59.747 43.478 0.00 0.00 0.00 4.85
281 282 3.485394 TGTTGATTGTGTGTGTATGGCT 58.515 40.909 0.00 0.00 0.00 4.75
282 283 3.913548 TGTTGATTGTGTGTGTATGGC 57.086 42.857 0.00 0.00 0.00 4.40
283 284 6.511605 CGGATATGTTGATTGTGTGTGTATGG 60.512 42.308 0.00 0.00 0.00 2.74
284 285 6.037062 ACGGATATGTTGATTGTGTGTGTATG 59.963 38.462 0.00 0.00 0.00 2.39
285 286 6.037062 CACGGATATGTTGATTGTGTGTGTAT 59.963 38.462 0.00 0.00 0.00 2.29
286 287 5.350091 CACGGATATGTTGATTGTGTGTGTA 59.650 40.000 0.00 0.00 0.00 2.90
287 288 4.154015 CACGGATATGTTGATTGTGTGTGT 59.846 41.667 0.00 0.00 0.00 3.72
288 289 4.391523 TCACGGATATGTTGATTGTGTGTG 59.608 41.667 0.00 0.00 0.00 3.82
289 290 4.574892 TCACGGATATGTTGATTGTGTGT 58.425 39.130 0.00 0.00 0.00 3.72
290 291 5.294060 TCATCACGGATATGTTGATTGTGTG 59.706 40.000 0.00 0.00 0.00 3.82
291 292 5.427378 TCATCACGGATATGTTGATTGTGT 58.573 37.500 0.00 0.00 0.00 3.72
292 293 5.754890 TCTCATCACGGATATGTTGATTGTG 59.245 40.000 0.00 0.00 30.02 3.33
293 294 5.917462 TCTCATCACGGATATGTTGATTGT 58.083 37.500 0.00 0.00 30.02 2.71
294 295 6.849588 TTCTCATCACGGATATGTTGATTG 57.150 37.500 0.00 0.00 30.02 2.67
295 296 7.935755 AGAATTCTCATCACGGATATGTTGATT 59.064 33.333 0.88 0.00 30.02 2.57
296 297 7.448420 AGAATTCTCATCACGGATATGTTGAT 58.552 34.615 0.88 0.00 30.02 2.57
297 298 6.820335 AGAATTCTCATCACGGATATGTTGA 58.180 36.000 0.88 0.00 0.00 3.18
298 299 8.491152 GTTAGAATTCTCATCACGGATATGTTG 58.509 37.037 12.24 0.00 0.00 3.33
299 300 7.382488 CGTTAGAATTCTCATCACGGATATGTT 59.618 37.037 12.24 0.00 0.00 2.71
300 301 6.863645 CGTTAGAATTCTCATCACGGATATGT 59.136 38.462 12.24 0.00 0.00 2.29
301 302 6.863645 ACGTTAGAATTCTCATCACGGATATG 59.136 38.462 22.82 5.65 0.00 1.78
302 303 6.982852 ACGTTAGAATTCTCATCACGGATAT 58.017 36.000 22.82 8.37 0.00 1.63
303 304 6.387041 ACGTTAGAATTCTCATCACGGATA 57.613 37.500 22.82 0.31 0.00 2.59
304 305 5.263968 ACGTTAGAATTCTCATCACGGAT 57.736 39.130 22.82 9.10 0.00 4.18
305 306 4.713824 ACGTTAGAATTCTCATCACGGA 57.286 40.909 22.82 1.52 0.00 4.69
306 307 6.019801 CCTTTACGTTAGAATTCTCATCACGG 60.020 42.308 22.82 10.34 0.00 4.94
307 308 6.750501 TCCTTTACGTTAGAATTCTCATCACG 59.249 38.462 12.24 17.22 0.00 4.35
308 309 7.544566 TGTCCTTTACGTTAGAATTCTCATCAC 59.455 37.037 12.24 4.27 0.00 3.06
309 310 7.608153 TGTCCTTTACGTTAGAATTCTCATCA 58.392 34.615 12.24 0.00 0.00 3.07
310 311 8.475331 TTGTCCTTTACGTTAGAATTCTCATC 57.525 34.615 12.24 3.02 0.00 2.92
311 312 7.064728 GCTTGTCCTTTACGTTAGAATTCTCAT 59.935 37.037 12.24 0.00 0.00 2.90
312 313 6.367969 GCTTGTCCTTTACGTTAGAATTCTCA 59.632 38.462 12.24 0.00 0.00 3.27
313 314 6.183360 GGCTTGTCCTTTACGTTAGAATTCTC 60.183 42.308 12.24 0.00 0.00 2.87
314 315 5.642491 GGCTTGTCCTTTACGTTAGAATTCT 59.358 40.000 13.56 13.56 0.00 2.40
315 316 5.445540 CGGCTTGTCCTTTACGTTAGAATTC 60.446 44.000 0.00 0.00 0.00 2.17
316 317 4.390909 CGGCTTGTCCTTTACGTTAGAATT 59.609 41.667 0.00 0.00 0.00 2.17
317 318 3.930848 CGGCTTGTCCTTTACGTTAGAAT 59.069 43.478 0.00 0.00 0.00 2.40
318 319 3.243839 ACGGCTTGTCCTTTACGTTAGAA 60.244 43.478 0.00 0.00 0.00 2.10
319 320 2.297033 ACGGCTTGTCCTTTACGTTAGA 59.703 45.455 0.00 0.00 0.00 2.10
320 321 2.410730 CACGGCTTGTCCTTTACGTTAG 59.589 50.000 0.00 0.00 31.61 2.34
321 322 2.224018 ACACGGCTTGTCCTTTACGTTA 60.224 45.455 0.00 0.00 29.79 3.18
322 323 1.223187 CACGGCTTGTCCTTTACGTT 58.777 50.000 0.00 0.00 31.61 3.99
323 324 0.105408 ACACGGCTTGTCCTTTACGT 59.895 50.000 0.00 0.00 29.79 3.57
324 325 0.511221 CACACGGCTTGTCCTTTACG 59.489 55.000 0.00 0.00 35.67 3.18
325 326 1.873698 TCACACGGCTTGTCCTTTAC 58.126 50.000 0.00 0.00 35.67 2.01
326 327 2.103432 TCTTCACACGGCTTGTCCTTTA 59.897 45.455 0.00 0.00 35.67 1.85
327 328 1.134220 TCTTCACACGGCTTGTCCTTT 60.134 47.619 0.00 0.00 35.67 3.11
328 329 0.468226 TCTTCACACGGCTTGTCCTT 59.532 50.000 0.00 0.00 35.67 3.36
329 330 0.468226 TTCTTCACACGGCTTGTCCT 59.532 50.000 0.00 0.00 35.67 3.85
330 331 0.586802 GTTCTTCACACGGCTTGTCC 59.413 55.000 0.00 0.00 35.67 4.02
331 332 1.583054 AGTTCTTCACACGGCTTGTC 58.417 50.000 0.00 0.00 35.67 3.18
332 333 2.038387 AAGTTCTTCACACGGCTTGT 57.962 45.000 0.00 0.00 39.97 3.16
333 334 2.869801 TGTAAGTTCTTCACACGGCTTG 59.130 45.455 0.00 0.00 0.00 4.01
334 335 3.188159 TGTAAGTTCTTCACACGGCTT 57.812 42.857 0.00 0.00 0.00 4.35
335 336 2.902705 TGTAAGTTCTTCACACGGCT 57.097 45.000 0.00 0.00 0.00 5.52
336 337 4.483476 AAATGTAAGTTCTTCACACGGC 57.517 40.909 0.00 0.00 0.00 5.68
337 338 5.390567 GCCTAAATGTAAGTTCTTCACACGG 60.391 44.000 0.00 0.00 0.00 4.94
338 339 5.408604 AGCCTAAATGTAAGTTCTTCACACG 59.591 40.000 0.00 0.00 0.00 4.49
339 340 6.401153 CGAGCCTAAATGTAAGTTCTTCACAC 60.401 42.308 0.00 0.00 0.00 3.82
340 341 5.637810 CGAGCCTAAATGTAAGTTCTTCACA 59.362 40.000 0.00 0.00 0.00 3.58
341 342 5.867716 TCGAGCCTAAATGTAAGTTCTTCAC 59.132 40.000 0.00 0.00 0.00 3.18
342 343 5.867716 GTCGAGCCTAAATGTAAGTTCTTCA 59.132 40.000 0.00 0.00 0.00 3.02
343 344 5.867716 TGTCGAGCCTAAATGTAAGTTCTTC 59.132 40.000 0.00 0.00 0.00 2.87
344 345 5.790593 TGTCGAGCCTAAATGTAAGTTCTT 58.209 37.500 0.00 0.00 0.00 2.52
345 346 5.401531 TGTCGAGCCTAAATGTAAGTTCT 57.598 39.130 0.00 0.00 0.00 3.01
346 347 5.502544 GCATGTCGAGCCTAAATGTAAGTTC 60.503 44.000 0.00 0.00 0.00 3.01
347 348 4.332819 GCATGTCGAGCCTAAATGTAAGTT 59.667 41.667 0.00 0.00 0.00 2.66
348 349 3.871594 GCATGTCGAGCCTAAATGTAAGT 59.128 43.478 0.00 0.00 0.00 2.24
349 350 4.122776 AGCATGTCGAGCCTAAATGTAAG 58.877 43.478 0.00 0.00 0.00 2.34
350 351 4.137116 AGCATGTCGAGCCTAAATGTAA 57.863 40.909 0.00 0.00 0.00 2.41
351 352 3.819564 AGCATGTCGAGCCTAAATGTA 57.180 42.857 0.00 0.00 0.00 2.29
352 353 2.698855 AGCATGTCGAGCCTAAATGT 57.301 45.000 0.00 0.00 0.00 2.71
353 354 4.332543 TGTTAAGCATGTCGAGCCTAAATG 59.667 41.667 0.00 0.00 0.00 2.32
354 355 4.332819 GTGTTAAGCATGTCGAGCCTAAAT 59.667 41.667 0.00 0.00 0.00 1.40
355 356 3.682858 GTGTTAAGCATGTCGAGCCTAAA 59.317 43.478 0.00 0.00 0.00 1.85
356 357 3.259064 GTGTTAAGCATGTCGAGCCTAA 58.741 45.455 0.00 0.00 0.00 2.69
357 358 2.232696 TGTGTTAAGCATGTCGAGCCTA 59.767 45.455 0.00 0.00 0.00 3.93
358 359 1.001974 TGTGTTAAGCATGTCGAGCCT 59.998 47.619 0.00 0.00 0.00 4.58
359 360 1.438651 TGTGTTAAGCATGTCGAGCC 58.561 50.000 0.00 0.00 0.00 4.70
360 361 3.226347 GTTTGTGTTAAGCATGTCGAGC 58.774 45.455 0.00 0.00 0.00 5.03
361 362 3.469629 CGTTTGTGTTAAGCATGTCGAG 58.530 45.455 0.00 0.00 0.00 4.04
362 363 2.349060 GCGTTTGTGTTAAGCATGTCGA 60.349 45.455 0.00 0.00 0.00 4.20
363 364 1.969256 GCGTTTGTGTTAAGCATGTCG 59.031 47.619 0.00 0.00 0.00 4.35
364 365 2.973224 CAGCGTTTGTGTTAAGCATGTC 59.027 45.455 0.00 0.00 0.00 3.06
365 366 2.858260 GCAGCGTTTGTGTTAAGCATGT 60.858 45.455 0.00 0.00 0.00 3.21
366 367 1.715519 GCAGCGTTTGTGTTAAGCATG 59.284 47.619 0.00 0.00 0.00 4.06
367 368 1.335872 GGCAGCGTTTGTGTTAAGCAT 60.336 47.619 0.00 0.00 0.00 3.79
368 369 0.030101 GGCAGCGTTTGTGTTAAGCA 59.970 50.000 0.00 0.00 0.00 3.91
369 370 0.310854 AGGCAGCGTTTGTGTTAAGC 59.689 50.000 0.00 0.00 0.00 3.09
370 371 2.806244 AGTAGGCAGCGTTTGTGTTAAG 59.194 45.455 0.00 0.00 0.00 1.85
371 372 2.841215 AGTAGGCAGCGTTTGTGTTAA 58.159 42.857 0.00 0.00 0.00 2.01
372 373 2.536761 AGTAGGCAGCGTTTGTGTTA 57.463 45.000 0.00 0.00 0.00 2.41
373 374 2.140717 GTAGTAGGCAGCGTTTGTGTT 58.859 47.619 0.00 0.00 0.00 3.32
374 375 1.069513 TGTAGTAGGCAGCGTTTGTGT 59.930 47.619 0.00 0.00 0.00 3.72
375 376 1.790755 TGTAGTAGGCAGCGTTTGTG 58.209 50.000 0.00 0.00 0.00 3.33
376 377 2.140717 GTTGTAGTAGGCAGCGTTTGT 58.859 47.619 0.00 0.00 0.00 2.83
377 378 2.096417 GTGTTGTAGTAGGCAGCGTTTG 60.096 50.000 0.00 0.00 0.00 2.93
378 379 2.140717 GTGTTGTAGTAGGCAGCGTTT 58.859 47.619 0.00 0.00 0.00 3.60
379 380 1.607251 GGTGTTGTAGTAGGCAGCGTT 60.607 52.381 0.00 0.00 0.00 4.84
380 381 0.037605 GGTGTTGTAGTAGGCAGCGT 60.038 55.000 0.00 0.00 0.00 5.07
381 382 0.037697 TGGTGTTGTAGTAGGCAGCG 60.038 55.000 0.00 0.00 32.69 5.18
382 383 1.270625 TGTGGTGTTGTAGTAGGCAGC 60.271 52.381 0.00 0.00 0.00 5.25
383 384 2.831685 TGTGGTGTTGTAGTAGGCAG 57.168 50.000 0.00 0.00 0.00 4.85
384 385 2.635427 TGATGTGGTGTTGTAGTAGGCA 59.365 45.455 0.00 0.00 0.00 4.75
385 386 3.328382 TGATGTGGTGTTGTAGTAGGC 57.672 47.619 0.00 0.00 0.00 3.93
386 387 3.678072 CGTTGATGTGGTGTTGTAGTAGG 59.322 47.826 0.00 0.00 0.00 3.18
387 388 3.678072 CCGTTGATGTGGTGTTGTAGTAG 59.322 47.826 0.00 0.00 0.00 2.57
393 394 2.150390 TCATCCGTTGATGTGGTGTTG 58.850 47.619 2.77 0.00 46.96 3.33
395 396 2.559698 TTCATCCGTTGATGTGGTGT 57.440 45.000 2.77 0.00 46.96 4.16
448 449 9.687210 GAATATGAATTCTGCATTATTGCTTGA 57.313 29.630 7.05 6.50 40.77 3.02
502 507 4.733523 GCGGCGATTTTGAGATTTATTGGT 60.734 41.667 12.98 0.00 0.00 3.67
511 516 2.309528 ACTATGCGGCGATTTTGAGA 57.690 45.000 12.98 0.00 0.00 3.27
524 529 6.763135 TGGACAGAATCTGTTTCATACTATGC 59.237 38.462 17.79 0.00 45.44 3.14
529 534 5.163713 GCCTTGGACAGAATCTGTTTCATAC 60.164 44.000 17.79 3.22 45.44 2.39
537 542 3.152341 AGTTTGCCTTGGACAGAATCTG 58.848 45.455 8.98 8.98 37.52 2.90
568 573 7.112122 TGTGGCAATACTCTGTCATTTATTCT 58.888 34.615 0.00 0.00 32.58 2.40
582 587 5.716228 TGGAATCATCTTTTGTGGCAATACT 59.284 36.000 0.00 0.00 0.00 2.12
584 589 5.105392 GGTGGAATCATCTTTTGTGGCAATA 60.105 40.000 0.00 0.00 0.00 1.90
585 590 4.322953 GGTGGAATCATCTTTTGTGGCAAT 60.323 41.667 0.00 0.00 0.00 3.56
586 591 3.006752 GGTGGAATCATCTTTTGTGGCAA 59.993 43.478 0.00 0.00 0.00 4.52
599 604 4.638421 GGTGTCATTTATTCGGTGGAATCA 59.362 41.667 0.00 0.00 41.88 2.57
602 607 4.258543 GAGGTGTCATTTATTCGGTGGAA 58.741 43.478 0.00 0.00 36.41 3.53
608 613 3.431856 TCGTCGAGGTGTCATTTATTCG 58.568 45.455 4.85 0.00 0.00 3.34
649 654 5.068591 TCCGTAGTAGTACTCCATACGTGTA 59.931 44.000 22.45 11.86 38.97 2.90
658 663 8.894768 TCTAAGTATTTCCGTAGTAGTACTCC 57.105 38.462 5.96 0.00 0.00 3.85
670 675 9.931210 GGACACAATTAAATCTAAGTATTTCCG 57.069 33.333 0.00 0.00 31.63 4.30
679 684 8.736244 GCCTTACTTGGACACAATTAAATCTAA 58.264 33.333 0.00 0.00 33.21 2.10
682 687 6.027749 CGCCTTACTTGGACACAATTAAATC 58.972 40.000 0.00 0.00 33.21 2.17
691 696 3.500680 TCAAATTCGCCTTACTTGGACAC 59.499 43.478 0.00 0.00 0.00 3.67
750 755 2.508439 CGTGCGACGGCTGGTTAT 60.508 61.111 0.00 0.00 38.08 1.89
847 860 4.093703 TGCCATTTATAGTTCGGTGTTTCG 59.906 41.667 0.00 0.00 0.00 3.46
848 861 5.554822 TGCCATTTATAGTTCGGTGTTTC 57.445 39.130 0.00 0.00 0.00 2.78
852 865 2.290641 GGCTGCCATTTATAGTTCGGTG 59.709 50.000 15.17 0.00 0.00 4.94
853 866 2.092646 TGGCTGCCATTTATAGTTCGGT 60.093 45.455 19.30 0.00 0.00 4.69
857 870 2.297701 CCGTGGCTGCCATTTATAGTT 58.702 47.619 26.22 0.00 35.28 2.24
954 977 0.164002 GGTGTCGCGAGAAAGCTTTC 59.836 55.000 28.21 28.21 42.48 2.62
958 981 2.430244 TCGGTGTCGCGAGAAAGC 60.430 61.111 10.24 7.32 45.01 3.51
1736 3915 0.895559 CTTGGGGTTGGACCAGAAGC 60.896 60.000 0.00 0.00 41.02 3.86
1767 3946 0.179108 AGAACGAGGTAATGAGCGGC 60.179 55.000 0.00 0.00 0.00 6.53
1812 3991 7.041780 CGAGTAATTTGAAATGGAGGGAGTATG 60.042 40.741 0.00 0.00 0.00 2.39
1813 3992 6.992715 CGAGTAATTTGAAATGGAGGGAGTAT 59.007 38.462 0.00 0.00 0.00 2.12
1814 3993 6.070424 ACGAGTAATTTGAAATGGAGGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
1816 3995 5.186198 ACGAGTAATTTGAAATGGAGGGAG 58.814 41.667 0.00 0.00 0.00 4.30
1820 3999 4.092821 TGCGACGAGTAATTTGAAATGGAG 59.907 41.667 0.00 0.00 0.00 3.86
1821 4000 3.997681 TGCGACGAGTAATTTGAAATGGA 59.002 39.130 0.00 0.00 0.00 3.41
1822 4001 4.335082 TGCGACGAGTAATTTGAAATGG 57.665 40.909 0.00 0.00 0.00 3.16
1823 4002 6.667981 TTTTGCGACGAGTAATTTGAAATG 57.332 33.333 0.00 0.00 0.00 2.32
1824 4003 7.867445 ATTTTTGCGACGAGTAATTTGAAAT 57.133 28.000 0.00 0.00 0.00 2.17
1825 4004 8.283992 TCTATTTTTGCGACGAGTAATTTGAAA 58.716 29.630 0.00 0.00 0.00 2.69
1826 4005 7.798801 TCTATTTTTGCGACGAGTAATTTGAA 58.201 30.769 0.00 0.00 0.00 2.69
1827 4006 7.354025 TCTATTTTTGCGACGAGTAATTTGA 57.646 32.000 0.00 0.00 0.00 2.69
1828 4007 9.864034 ATATCTATTTTTGCGACGAGTAATTTG 57.136 29.630 0.00 0.00 0.00 2.32
1881 4060 9.566530 CCGAATTACTCATCATAGAAGTAGATG 57.433 37.037 0.00 0.00 40.29 2.90
1882 4061 9.521841 TCCGAATTACTCATCATAGAAGTAGAT 57.478 33.333 0.00 0.00 0.00 1.98
1883 4062 8.919777 TCCGAATTACTCATCATAGAAGTAGA 57.080 34.615 0.00 0.00 0.00 2.59
1884 4063 9.967346 TTTCCGAATTACTCATCATAGAAGTAG 57.033 33.333 0.00 0.00 0.00 2.57
1885 4064 9.745880 GTTTCCGAATTACTCATCATAGAAGTA 57.254 33.333 0.00 0.00 0.00 2.24
1886 4065 7.435488 CGTTTCCGAATTACTCATCATAGAAGT 59.565 37.037 0.00 0.00 35.63 3.01
1887 4066 7.096023 CCGTTTCCGAATTACTCATCATAGAAG 60.096 40.741 0.00 0.00 35.63 2.85
1888 4067 6.700081 CCGTTTCCGAATTACTCATCATAGAA 59.300 38.462 0.00 0.00 35.63 2.10
1889 4068 6.040054 TCCGTTTCCGAATTACTCATCATAGA 59.960 38.462 0.00 0.00 35.63 1.98
1890 4069 6.213677 TCCGTTTCCGAATTACTCATCATAG 58.786 40.000 0.00 0.00 35.63 2.23
1891 4070 6.151663 TCCGTTTCCGAATTACTCATCATA 57.848 37.500 0.00 0.00 35.63 2.15
1892 4071 5.018539 TCCGTTTCCGAATTACTCATCAT 57.981 39.130 0.00 0.00 35.63 2.45
1893 4072 4.430007 CTCCGTTTCCGAATTACTCATCA 58.570 43.478 0.00 0.00 35.63 3.07
1894 4073 3.802685 CCTCCGTTTCCGAATTACTCATC 59.197 47.826 0.00 0.00 35.63 2.92
1895 4074 3.449737 TCCTCCGTTTCCGAATTACTCAT 59.550 43.478 0.00 0.00 35.63 2.90
1896 4075 2.827322 TCCTCCGTTTCCGAATTACTCA 59.173 45.455 0.00 0.00 35.63 3.41
1897 4076 3.515330 TCCTCCGTTTCCGAATTACTC 57.485 47.619 0.00 0.00 35.63 2.59
1898 4077 3.260128 ACTTCCTCCGTTTCCGAATTACT 59.740 43.478 0.00 0.00 35.63 2.24
1899 4078 3.593096 ACTTCCTCCGTTTCCGAATTAC 58.407 45.455 0.00 0.00 35.63 1.89
1900 4079 3.967332 ACTTCCTCCGTTTCCGAATTA 57.033 42.857 0.00 0.00 35.63 1.40
1901 4080 2.853235 ACTTCCTCCGTTTCCGAATT 57.147 45.000 0.00 0.00 35.63 2.17
1902 4081 2.564062 TGTACTTCCTCCGTTTCCGAAT 59.436 45.455 0.00 0.00 35.63 3.34
1903 4082 1.962807 TGTACTTCCTCCGTTTCCGAA 59.037 47.619 0.00 0.00 35.63 4.30
1904 4083 1.619654 TGTACTTCCTCCGTTTCCGA 58.380 50.000 0.00 0.00 35.63 4.55
1905 4084 2.094390 TCATGTACTTCCTCCGTTTCCG 60.094 50.000 0.00 0.00 0.00 4.30
1906 4085 3.604875 TCATGTACTTCCTCCGTTTCC 57.395 47.619 0.00 0.00 0.00 3.13
1907 4086 7.711339 AGATTTATCATGTACTTCCTCCGTTTC 59.289 37.037 0.00 0.00 0.00 2.78
1908 4087 7.565680 AGATTTATCATGTACTTCCTCCGTTT 58.434 34.615 0.00 0.00 0.00 3.60
1909 4088 7.125792 AGATTTATCATGTACTTCCTCCGTT 57.874 36.000 0.00 0.00 0.00 4.44
1910 4089 6.323996 TGAGATTTATCATGTACTTCCTCCGT 59.676 38.462 0.00 0.00 0.00 4.69
1911 4090 6.642950 GTGAGATTTATCATGTACTTCCTCCG 59.357 42.308 0.00 0.00 0.00 4.63
1912 4091 7.500992 TGTGAGATTTATCATGTACTTCCTCC 58.499 38.462 0.00 0.00 0.00 4.30
1913 4092 8.948631 TTGTGAGATTTATCATGTACTTCCTC 57.051 34.615 0.00 0.00 0.00 3.71
1914 4093 9.739276 TTTTGTGAGATTTATCATGTACTTCCT 57.261 29.630 0.00 0.00 0.00 3.36
1915 4094 9.774742 GTTTTGTGAGATTTATCATGTACTTCC 57.225 33.333 0.00 0.00 0.00 3.46
1916 4095 9.478019 CGTTTTGTGAGATTTATCATGTACTTC 57.522 33.333 0.00 0.00 0.00 3.01
1917 4096 9.214957 TCGTTTTGTGAGATTTATCATGTACTT 57.785 29.630 0.00 0.00 0.00 2.24
1918 4097 8.771920 TCGTTTTGTGAGATTTATCATGTACT 57.228 30.769 0.00 0.00 0.00 2.73
1919 4098 8.656849 ACTCGTTTTGTGAGATTTATCATGTAC 58.343 33.333 0.00 0.00 36.93 2.90
1920 4099 8.771920 ACTCGTTTTGTGAGATTTATCATGTA 57.228 30.769 0.00 0.00 36.93 2.29
1921 4100 7.672983 ACTCGTTTTGTGAGATTTATCATGT 57.327 32.000 0.00 0.00 36.93 3.21
1922 4101 8.229811 TGAACTCGTTTTGTGAGATTTATCATG 58.770 33.333 0.00 0.00 36.93 3.07
1923 4102 8.322906 TGAACTCGTTTTGTGAGATTTATCAT 57.677 30.769 0.00 0.00 36.93 2.45
1924 4103 7.722795 TGAACTCGTTTTGTGAGATTTATCA 57.277 32.000 0.00 0.00 36.93 2.15
1928 4107 9.233232 GTTTATTGAACTCGTTTTGTGAGATTT 57.767 29.630 0.00 0.00 36.93 2.17
1929 4108 7.586300 CGTTTATTGAACTCGTTTTGTGAGATT 59.414 33.333 0.00 0.00 36.93 2.40
1930 4109 7.042321 TCGTTTATTGAACTCGTTTTGTGAGAT 60.042 33.333 0.00 0.00 36.93 2.75
1931 4110 6.256104 TCGTTTATTGAACTCGTTTTGTGAGA 59.744 34.615 0.00 0.00 36.93 3.27
1932 4111 6.353582 GTCGTTTATTGAACTCGTTTTGTGAG 59.646 38.462 0.00 0.00 39.40 3.51
1933 4112 6.183360 TGTCGTTTATTGAACTCGTTTTGTGA 60.183 34.615 0.00 0.00 36.06 3.58
1934 4113 5.960683 TGTCGTTTATTGAACTCGTTTTGTG 59.039 36.000 0.00 0.00 36.06 3.33
1941 4120 7.220108 TCAGATGTATGTCGTTTATTGAACTCG 59.780 37.037 0.00 0.00 36.06 4.18
1957 4136 2.604914 GCACGGAACTGTCAGATGTATG 59.395 50.000 6.91 0.69 0.00 2.39
1965 4163 2.020720 ACATTTTGCACGGAACTGTCA 58.979 42.857 0.00 0.00 0.00 3.58
1998 4196 5.238214 GCAGTCTTTGTGTGAAAGAATCTCT 59.762 40.000 0.00 0.00 37.93 3.10
1999 4197 5.238214 AGCAGTCTTTGTGTGAAAGAATCTC 59.762 40.000 0.00 0.00 37.93 2.75
2039 4243 6.758593 TTTAGATGAACAGTACAACACGAC 57.241 37.500 0.00 0.00 0.00 4.34
2062 4266 3.328237 AGCGACGACAAAACGATTTTT 57.672 38.095 0.00 0.00 35.15 1.94
2076 4280 1.068474 CACCCAGAAGTTTAGCGACG 58.932 55.000 0.00 0.00 0.00 5.12
2077 4281 0.796927 GCACCCAGAAGTTTAGCGAC 59.203 55.000 0.00 0.00 0.00 5.19
2088 4292 1.204146 GGATAAGGACTGCACCCAGA 58.796 55.000 3.48 0.00 41.77 3.86
2089 4293 1.139853 GAGGATAAGGACTGCACCCAG 59.860 57.143 3.48 0.00 44.80 4.45
2090 4294 1.204146 GAGGATAAGGACTGCACCCA 58.796 55.000 3.48 0.00 0.00 4.51
2093 4297 2.674796 AACGAGGATAAGGACTGCAC 57.325 50.000 0.00 0.00 0.00 4.57
2120 4331 0.389948 ATCTGACGGAAACCAGCGAC 60.390 55.000 0.00 0.00 0.00 5.19
2126 4337 4.412207 GTGCAAAATATCTGACGGAAACC 58.588 43.478 0.00 0.00 0.00 3.27
2133 4344 3.018423 AGGGGGTGCAAAATATCTGAC 57.982 47.619 0.00 0.00 0.00 3.51
2135 4346 4.824479 AAAAGGGGGTGCAAAATATCTG 57.176 40.909 0.00 0.00 0.00 2.90
2144 4355 1.830408 CGGTCAAAAAGGGGGTGCA 60.830 57.895 0.00 0.00 0.00 4.57
2150 4361 0.040425 CGCTGAACGGTCAAAAAGGG 60.040 55.000 3.93 0.00 38.44 3.95
2197 4408 2.167161 CGGCTTTGGCGTTGTGATA 58.833 52.632 5.37 0.00 46.33 2.15
2206 4417 2.687935 TCCAATCTTTATCGGCTTTGGC 59.312 45.455 0.00 0.00 34.87 4.52
2214 4425 3.130633 TGGCGTGATCCAATCTTTATCG 58.869 45.455 0.00 0.00 32.18 2.92
2243 4454 1.777199 CGTTTCTACGCCACGGAAC 59.223 57.895 0.00 0.00 41.41 3.62
2342 4553 2.471255 CATCCGGTGGAAAGTGAGC 58.529 57.895 0.00 0.00 34.34 4.26
2360 4571 6.833933 ACTTGGTACTTATTTTCCATGGATCC 59.166 38.462 17.06 4.20 32.01 3.36
2414 4629 3.373565 GCCCCCAAAGCAAGTCGG 61.374 66.667 0.00 0.00 0.00 4.79
2415 4630 2.199652 TTGCCCCCAAAGCAAGTCG 61.200 57.895 0.00 0.00 44.95 4.18
2428 4643 1.970640 ACCATGTTCTTTCCTTTGCCC 59.029 47.619 0.00 0.00 0.00 5.36
2485 4700 1.344438 GGGATCCACATCGAGCATGTA 59.656 52.381 15.23 0.00 44.60 2.29
2490 4864 0.465705 TTCTGGGATCCACATCGAGC 59.534 55.000 15.23 0.00 0.00 5.03
2497 4871 1.092345 GCTTCGCTTCTGGGATCCAC 61.092 60.000 15.23 3.53 35.06 4.02
2507 4881 2.046892 TGCCCTCTGCTTCGCTTC 60.047 61.111 0.00 0.00 42.00 3.86
2508 4882 2.046507 CTGCCCTCTGCTTCGCTT 60.047 61.111 0.00 0.00 42.00 4.68
2509 4883 4.093291 CCTGCCCTCTGCTTCGCT 62.093 66.667 0.00 0.00 42.00 4.93
2511 4885 3.907260 TTGCCTGCCCTCTGCTTCG 62.907 63.158 0.00 0.00 42.00 3.79
2546 4926 1.557832 TGTTTACAGGGGAGGGAATCG 59.442 52.381 0.00 0.00 0.00 3.34
2573 4953 2.127758 CGGTGAGTGCGCGTTTTC 60.128 61.111 8.43 3.31 0.00 2.29
2622 5002 2.660236 CTCTACGTCAAGTAACGCCAAC 59.340 50.000 0.00 0.00 46.40 3.77
2626 5006 1.135460 AGCCTCTACGTCAAGTAACGC 60.135 52.381 0.00 0.00 46.40 4.84
2637 5017 3.242478 CGTCTCTTTCTGTAGCCTCTACG 60.242 52.174 0.29 0.00 0.00 3.51
2648 5028 1.858091 AGTGCACACGTCTCTTTCTG 58.142 50.000 21.04 0.00 36.20 3.02
2655 5035 9.769093 GATAAAAATAAAATAGTGCACACGTCT 57.231 29.630 21.04 0.00 36.20 4.18
2671 5051 9.905713 ACTCATTAGCTGTCCAGATAAAAATAA 57.094 29.630 8.86 0.00 41.81 1.40
2673 5053 7.201767 GCACTCATTAGCTGTCCAGATAAAAAT 60.202 37.037 8.86 0.00 41.81 1.82
2674 5054 6.094048 GCACTCATTAGCTGTCCAGATAAAAA 59.906 38.462 8.86 0.84 41.81 1.94
2684 5064 3.243877 CGTATGTGCACTCATTAGCTGTC 59.756 47.826 19.41 0.00 0.00 3.51
2698 5078 0.592247 CGGGGTACGTACGTATGTGC 60.592 60.000 29.05 24.93 37.93 4.57
2700 5080 1.014352 GTCGGGGTACGTACGTATGT 58.986 55.000 29.05 23.06 44.69 2.29
2701 5081 0.042188 CGTCGGGGTACGTACGTATG 60.042 60.000 29.05 18.95 44.69 2.39
2702 5082 1.157870 CCGTCGGGGTACGTACGTAT 61.158 60.000 29.05 7.54 44.69 3.06
2703 5083 1.812093 CCGTCGGGGTACGTACGTA 60.812 63.158 23.60 23.60 44.69 3.57
2735 5115 2.718073 GGCAGCAGGCTGGGATTTG 61.718 63.158 21.63 0.00 43.77 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.