Multiple sequence alignment - TraesCS6A01G318100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G318100 chr6A 100.000 7381 0 0 1 7381 554311324 554303944 0.000000e+00 13631.0
1 TraesCS6A01G318100 chr6A 82.456 399 64 6 6986 7381 553927432 553927037 1.970000e-90 344.0
2 TraesCS6A01G318100 chr6B 85.747 2603 176 91 1312 3834 612864484 612861997 0.000000e+00 2571.0
3 TraesCS6A01G318100 chr6B 83.807 1828 171 68 3820 5571 612861980 612860202 0.000000e+00 1620.0
4 TraesCS6A01G318100 chr6B 90.688 1192 91 15 6204 7381 612859593 612858408 0.000000e+00 1568.0
5 TraesCS6A01G318100 chr6B 88.087 596 37 14 1 589 612877465 612876897 0.000000e+00 676.0
6 TraesCS6A01G318100 chr6B 86.885 610 64 14 5612 6212 612860130 612859528 0.000000e+00 669.0
7 TraesCS6A01G318100 chr6B 84.146 574 33 29 601 1140 612865147 612864598 3.070000e-138 503.0
8 TraesCS6A01G318100 chr6B 82.697 393 60 8 6993 7381 612849440 612849052 7.090000e-90 342.0
9 TraesCS6A01G318100 chr6D 93.013 1188 73 4 6204 7381 408215647 408214460 0.000000e+00 1725.0
10 TraesCS6A01G318100 chr6D 85.136 1507 100 71 1049 2518 408222927 408221508 0.000000e+00 1428.0
11 TraesCS6A01G318100 chr6D 83.852 1350 89 59 2513 3809 408221465 408220192 0.000000e+00 1166.0
12 TraesCS6A01G318100 chr6D 88.099 605 51 13 5619 6212 408216176 408215582 0.000000e+00 699.0
13 TraesCS6A01G318100 chr6D 91.287 505 30 7 87 587 408223901 408223407 0.000000e+00 676.0
14 TraesCS6A01G318100 chr6D 83.543 717 46 27 4484 5173 408219243 408218572 8.190000e-169 604.0
15 TraesCS6A01G318100 chr6D 82.130 554 67 17 3950 4487 408219825 408219288 5.250000e-121 446.0
16 TraesCS6A01G318100 chr6D 83.002 453 29 26 598 1022 408223360 408222928 4.210000e-97 366.0
17 TraesCS6A01G318100 chr6D 90.943 265 22 2 5307 5571 408216527 408216265 9.110000e-94 355.0
18 TraesCS6A01G318100 chr6D 83.333 378 53 10 7009 7381 408184684 408184312 2.550000e-89 340.0
19 TraesCS6A01G318100 chr6D 89.262 149 6 2 3821 3960 408220122 408219975 2.120000e-40 178.0
20 TraesCS6A01G318100 chr2D 86.264 182 25 0 7118 7299 338330404 338330585 1.620000e-46 198.0
21 TraesCS6A01G318100 chr2A 80.150 267 47 6 7118 7381 448293506 448293769 2.100000e-45 195.0
22 TraesCS6A01G318100 chr2A 84.293 191 24 6 7116 7303 544333220 544333033 1.640000e-41 182.0
23 TraesCS6A01G318100 chr2B 79.779 272 43 12 7116 7381 481900628 481900363 3.520000e-43 187.0
24 TraesCS6A01G318100 chr7A 100.000 29 0 0 3566 3594 124067532 124067504 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G318100 chr6A 554303944 554311324 7380 True 13631.0 13631 100.0000 1 7381 1 chr6A.!!$R2 7380
1 TraesCS6A01G318100 chr6B 612858408 612865147 6739 True 1386.2 2571 86.2546 601 7381 5 chr6B.!!$R3 6780
2 TraesCS6A01G318100 chr6B 612876897 612877465 568 True 676.0 676 88.0870 1 589 1 chr6B.!!$R2 588
3 TraesCS6A01G318100 chr6D 408214460 408223901 9441 True 764.3 1725 87.0267 87 7381 10 chr6D.!!$R2 7294

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
345 356 0.033504 TGCCAGAGAGAAACGACCAC 59.966 55.0 0.00 0.00 0.00 4.16 F
1146 1247 0.340208 CCTCCCCCTCTCCTAGTTGT 59.660 60.0 0.00 0.00 0.00 3.32 F
1177 1278 0.032813 TATCGTTTCCTCCCCCGTCT 60.033 55.0 0.00 0.00 0.00 4.18 F
2213 2334 0.102481 TTGATTAGGGCTCGCGTCTC 59.898 55.0 5.77 0.00 0.00 3.36 F
3477 3717 0.036952 CAGAGGAACACATCTGGCGT 60.037 55.0 0.00 0.00 39.42 5.68 F
4414 4942 0.038166 TTGTGGTTCAGGGAGATGCC 59.962 55.0 0.00 0.00 0.00 4.40 F
5050 5683 0.107654 CAGGATTCCTTGACCGGTCC 60.108 60.0 31.19 14.30 0.00 4.46 F
5363 7916 0.108138 ACAATAGTGGGCTCGTGCTC 60.108 55.0 9.61 5.81 40.87 4.26 F
5965 8566 0.795085 CCGTTCTTTCAGCAGCAGAG 59.205 55.0 0.00 0.00 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1158 1259 0.032813 AGACGGGGGAGGAAACGATA 60.033 55.0 0.00 0.0 0.00 2.92 R
3000 3210 0.474184 ATATTCCCCTGGGCTCGTTG 59.526 55.0 7.39 0.0 34.68 4.10 R
3128 3338 1.139163 CATTTGGAAAAGCACCACGC 58.861 50.0 0.00 0.0 42.91 5.34 R
3614 3866 0.107831 TGTGCCCTACCACACAACTC 59.892 55.0 0.00 0.0 43.48 3.01 R
4717 5330 0.034863 TTTATGAACGGGCCTCCCAC 60.035 55.0 0.84 0.0 45.83 4.61 R
5363 7916 0.035458 GATGGATAGGGGTCAAGCCG 59.965 60.0 0.00 0.0 38.44 5.52 R
5945 8546 0.106708 TCTGCTGCTGAAAGAACGGT 59.893 50.0 6.77 0.0 34.07 4.83 R
6192 8794 0.524862 GCAACATAGCAGCAGCAAGT 59.475 50.0 3.17 0.0 45.49 3.16 R
6798 9441 0.804544 ACCGTTGTGCGTCCATATCG 60.805 55.0 0.00 0.0 39.32 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.571955 TGCATAAGCTCTCAGGTGGA 58.428 50.000 0.00 0.00 42.74 4.02
35 36 2.284190 GCATAAGCTCTCAGGTGGAAC 58.716 52.381 0.00 0.00 37.91 3.62
52 54 5.395990 GGTGGAACTTCACCGATCCTATTAA 60.396 44.000 0.00 0.00 46.31 1.40
53 55 6.289064 GTGGAACTTCACCGATCCTATTAAT 58.711 40.000 0.00 0.00 33.02 1.40
54 56 6.424207 GTGGAACTTCACCGATCCTATTAATC 59.576 42.308 0.00 0.00 33.02 1.75
68 70 9.257651 GATCCTATTAATCGGATATTTTACCCG 57.742 37.037 18.79 0.00 40.03 5.28
84 86 1.611491 ACCCGCAAACCAACATACAAG 59.389 47.619 0.00 0.00 0.00 3.16
85 87 1.668628 CCCGCAAACCAACATACAAGC 60.669 52.381 0.00 0.00 0.00 4.01
91 96 5.628134 GCAAACCAACATACAAGCTAGTAC 58.372 41.667 0.00 0.00 0.00 2.73
94 99 5.086104 ACCAACATACAAGCTAGTACAGG 57.914 43.478 0.00 0.00 0.00 4.00
112 119 7.630082 AGTACAGGAGCAGGAATTTTACATTA 58.370 34.615 0.00 0.00 0.00 1.90
121 128 9.959721 AGCAGGAATTTTACATTAGTCTTAGAA 57.040 29.630 0.00 0.00 0.00 2.10
129 136 4.833390 ACATTAGTCTTAGAACAGCCACC 58.167 43.478 0.00 0.00 0.00 4.61
134 141 0.673644 CTTAGAACAGCCACCGTGGG 60.674 60.000 19.41 6.00 38.19 4.61
136 143 1.823169 TAGAACAGCCACCGTGGGTC 61.823 60.000 19.53 8.91 46.99 4.46
137 144 3.469863 GAACAGCCACCGTGGGTCA 62.470 63.158 19.53 0.00 46.99 4.02
138 145 2.748058 GAACAGCCACCGTGGGTCAT 62.748 60.000 19.53 11.08 46.99 3.06
139 146 2.436646 CAGCCACCGTGGGTCATC 60.437 66.667 19.53 1.58 46.99 2.92
145 152 1.612991 CCACCGTGGGTCATCATCAAA 60.613 52.381 9.99 0.00 31.02 2.69
147 154 1.340017 ACCGTGGGTCATCATCAAAGG 60.340 52.381 0.00 0.00 0.00 3.11
186 193 1.867233 CGAACGCCCCTTGATAATCTG 59.133 52.381 0.00 0.00 0.00 2.90
234 241 2.202623 CTAGCACAGCGGACGGAC 60.203 66.667 0.00 0.00 0.00 4.79
345 356 0.033504 TGCCAGAGAGAAACGACCAC 59.966 55.000 0.00 0.00 0.00 4.16
392 403 1.167851 CCAACGATGCATGGACAACT 58.832 50.000 16.26 0.00 39.12 3.16
424 435 4.803426 CCACGACAGCTCGCTCCC 62.803 72.222 0.00 0.00 44.33 4.30
456 468 1.482177 CCACACAAATTCCCTCCCCAA 60.482 52.381 0.00 0.00 0.00 4.12
522 536 1.370414 CGCGTATACGTAACCCCGG 60.370 63.158 25.04 0.00 42.22 5.73
579 593 9.250624 CATTACTAGTGTTTAATCAGCTAGACC 57.749 37.037 19.23 0.00 34.77 3.85
591 605 1.759459 GCTAGACCCCCATTAGCGCT 61.759 60.000 17.26 17.26 31.54 5.92
593 607 1.546476 CTAGACCCCCATTAGCGCTAG 59.454 57.143 17.98 6.98 0.00 3.42
614 664 3.047877 GGTCGGCGTTGGTTCCTG 61.048 66.667 6.85 0.00 0.00 3.86
616 666 3.936203 TCGGCGTTGGTTCCTGCT 61.936 61.111 6.85 0.00 0.00 4.24
771 825 2.997315 TGGTGCACCTAGCTCGCT 60.997 61.111 34.75 0.00 45.94 4.93
829 883 2.887568 GCAGACGTGCCTGGATCG 60.888 66.667 0.00 3.47 44.72 3.69
830 884 2.885113 CAGACGTGCCTGGATCGA 59.115 61.111 15.48 0.00 0.00 3.59
919 1015 4.748144 GGGGAAGGTGGCTGGCTG 62.748 72.222 2.00 0.00 0.00 4.85
963 1063 0.881118 CCAGCGCCTCTATCTCTCTC 59.119 60.000 2.29 0.00 0.00 3.20
964 1064 1.545428 CCAGCGCCTCTATCTCTCTCT 60.545 57.143 2.29 0.00 0.00 3.10
965 1065 1.806542 CAGCGCCTCTATCTCTCTCTC 59.193 57.143 2.29 0.00 0.00 3.20
966 1066 1.699634 AGCGCCTCTATCTCTCTCTCT 59.300 52.381 2.29 0.00 0.00 3.10
996 1096 5.905480 AAAAGAATTGGATTTGAACGCAC 57.095 34.783 0.00 0.00 0.00 5.34
997 1097 4.582701 AAGAATTGGATTTGAACGCACA 57.417 36.364 0.00 0.00 0.00 4.57
998 1098 3.900941 AGAATTGGATTTGAACGCACAC 58.099 40.909 0.00 0.00 0.00 3.82
999 1099 3.317711 AGAATTGGATTTGAACGCACACA 59.682 39.130 0.00 0.00 0.00 3.72
1011 1111 4.036852 TGAACGCACACAATGGAATACAAA 59.963 37.500 0.00 0.00 0.00 2.83
1014 1114 3.913763 CGCACACAATGGAATACAAACAG 59.086 43.478 0.00 0.00 0.00 3.16
1015 1115 4.236935 GCACACAATGGAATACAAACAGG 58.763 43.478 0.00 0.00 0.00 4.00
1016 1116 4.022416 GCACACAATGGAATACAAACAGGA 60.022 41.667 0.00 0.00 0.00 3.86
1017 1117 5.702865 CACACAATGGAATACAAACAGGAG 58.297 41.667 0.00 0.00 0.00 3.69
1071 1172 3.495434 TTGGAAACGAGGGCTAGAAAA 57.505 42.857 0.00 0.00 0.00 2.29
1141 1242 2.708132 CCCCCTCCCCCTCTCCTA 60.708 72.222 0.00 0.00 0.00 2.94
1142 1243 2.795938 CCCCCTCCCCCTCTCCTAG 61.796 73.684 0.00 0.00 0.00 3.02
1144 1245 1.604592 CCCCTCCCCCTCTCCTAGTT 61.605 65.000 0.00 0.00 0.00 2.24
1145 1246 0.399233 CCCTCCCCCTCTCCTAGTTG 60.399 65.000 0.00 0.00 0.00 3.16
1146 1247 0.340208 CCTCCCCCTCTCCTAGTTGT 59.660 60.000 0.00 0.00 0.00 3.32
1147 1248 1.574339 CCTCCCCCTCTCCTAGTTGTA 59.426 57.143 0.00 0.00 0.00 2.41
1148 1249 2.425102 CCTCCCCCTCTCCTAGTTGTAG 60.425 59.091 0.00 0.00 0.00 2.74
1149 1250 2.514582 CTCCCCCTCTCCTAGTTGTAGA 59.485 54.545 0.00 0.00 0.00 2.59
1152 1253 3.374318 CCCCCTCTCCTAGTTGTAGACAT 60.374 52.174 0.00 0.00 0.00 3.06
1153 1254 4.140994 CCCCCTCTCCTAGTTGTAGACATA 60.141 50.000 0.00 0.00 0.00 2.29
1154 1255 4.828387 CCCCTCTCCTAGTTGTAGACATAC 59.172 50.000 0.00 0.00 0.00 2.39
1155 1256 5.446860 CCCTCTCCTAGTTGTAGACATACA 58.553 45.833 0.00 0.00 40.18 2.29
1157 1258 6.358178 CCTCTCCTAGTTGTAGACATACAGA 58.642 44.000 0.00 0.00 42.72 3.41
1158 1259 7.001674 CCTCTCCTAGTTGTAGACATACAGAT 58.998 42.308 0.00 0.00 42.72 2.90
1161 1262 9.727859 TCTCCTAGTTGTAGACATACAGATATC 57.272 37.037 0.00 0.00 42.72 1.63
1162 1263 8.549338 TCCTAGTTGTAGACATACAGATATCG 57.451 38.462 0.00 0.00 42.72 2.92
1163 1264 8.155510 TCCTAGTTGTAGACATACAGATATCGT 58.844 37.037 0.00 1.54 42.72 3.73
1167 1268 8.136165 AGTTGTAGACATACAGATATCGTTTCC 58.864 37.037 5.71 0.00 42.72 3.13
1173 1274 2.047830 ACAGATATCGTTTCCTCCCCC 58.952 52.381 0.00 0.00 0.00 5.40
1174 1275 1.000955 CAGATATCGTTTCCTCCCCCG 59.999 57.143 0.00 0.00 0.00 5.73
1175 1276 1.046204 GATATCGTTTCCTCCCCCGT 58.954 55.000 0.00 0.00 0.00 5.28
1177 1278 0.032813 TATCGTTTCCTCCCCCGTCT 60.033 55.000 0.00 0.00 0.00 4.18
1179 1280 2.577593 GTTTCCTCCCCCGTCTCG 59.422 66.667 0.00 0.00 0.00 4.04
1188 1289 2.416432 CCCCGTCTCGTCTCTTCCC 61.416 68.421 0.00 0.00 0.00 3.97
1194 1295 0.967887 TCTCGTCTCTTCCCAGGCAG 60.968 60.000 0.00 0.00 0.00 4.85
1197 1298 0.967887 CGTCTCTTCCCAGGCAGAGA 60.968 60.000 11.45 11.45 42.73 3.10
1199 1300 0.707024 TCTCTTCCCAGGCAGAGAGA 59.293 55.000 11.45 10.37 40.56 3.10
1200 1301 1.113788 CTCTTCCCAGGCAGAGAGAG 58.886 60.000 7.51 0.00 39.21 3.20
1201 1302 0.325110 TCTTCCCAGGCAGAGAGAGG 60.325 60.000 0.00 0.00 0.00 3.69
1202 1303 0.325110 CTTCCCAGGCAGAGAGAGGA 60.325 60.000 0.00 0.00 0.00 3.71
1204 1305 1.761667 CCCAGGCAGAGAGAGGAGG 60.762 68.421 0.00 0.00 0.00 4.30
1205 1306 1.761667 CCAGGCAGAGAGAGGAGGG 60.762 68.421 0.00 0.00 0.00 4.30
1206 1307 2.042025 AGGCAGAGAGAGGAGGGC 60.042 66.667 0.00 0.00 0.00 5.19
1207 1308 3.535962 GGCAGAGAGAGGAGGGCG 61.536 72.222 0.00 0.00 0.00 6.13
1208 1309 2.441164 GCAGAGAGAGGAGGGCGA 60.441 66.667 0.00 0.00 0.00 5.54
1209 1310 2.489275 GCAGAGAGAGGAGGGCGAG 61.489 68.421 0.00 0.00 0.00 5.03
1210 1311 1.827789 CAGAGAGAGGAGGGCGAGG 60.828 68.421 0.00 0.00 0.00 4.63
1211 1312 3.223589 GAGAGAGGAGGGCGAGGC 61.224 72.222 0.00 0.00 0.00 4.70
1224 1325 2.006772 CGAGGCGTGTTATGGAAGC 58.993 57.895 0.00 0.00 0.00 3.86
1228 1329 1.721487 GCGTGTTATGGAAGCGCAT 59.279 52.632 11.47 0.00 46.23 4.73
1239 1340 1.657751 GAAGCGCATCTTTCCACCCC 61.658 60.000 11.47 0.00 34.56 4.95
1242 1343 1.815421 CGCATCTTTCCACCCCGAG 60.815 63.158 0.00 0.00 0.00 4.63
1247 1348 2.602267 TTTCCACCCCGAGCGAGA 60.602 61.111 0.00 0.00 0.00 4.04
1251 1352 3.522731 CACCCCGAGCGAGAGGAG 61.523 72.222 0.00 0.00 0.00 3.69
1253 1354 2.904866 CCCCGAGCGAGAGGAGAG 60.905 72.222 0.00 0.00 0.00 3.20
1254 1355 2.190843 CCCGAGCGAGAGGAGAGA 59.809 66.667 0.00 0.00 0.00 3.10
1255 1356 1.228124 CCCGAGCGAGAGGAGAGAT 60.228 63.158 0.00 0.00 0.00 2.75
1256 1357 1.234615 CCCGAGCGAGAGGAGAGATC 61.235 65.000 0.00 0.00 0.00 2.75
1258 1359 1.304254 CGAGCGAGAGGAGAGATCAA 58.696 55.000 0.00 0.00 0.00 2.57
1259 1360 1.879380 CGAGCGAGAGGAGAGATCAAT 59.121 52.381 0.00 0.00 0.00 2.57
1264 1365 3.820689 CGAGAGGAGAGATCAATTAGCG 58.179 50.000 0.00 0.00 0.00 4.26
1265 1366 3.365868 CGAGAGGAGAGATCAATTAGCGG 60.366 52.174 0.00 0.00 0.00 5.52
1266 1367 2.896685 AGAGGAGAGATCAATTAGCGGG 59.103 50.000 0.00 0.00 0.00 6.13
1267 1368 1.974236 AGGAGAGATCAATTAGCGGGG 59.026 52.381 0.00 0.00 0.00 5.73
1268 1369 1.971357 GGAGAGATCAATTAGCGGGGA 59.029 52.381 0.00 0.00 0.00 4.81
1269 1370 2.289133 GGAGAGATCAATTAGCGGGGAC 60.289 54.545 0.00 0.00 0.00 4.46
1270 1371 2.365617 GAGAGATCAATTAGCGGGGACA 59.634 50.000 0.00 0.00 0.00 4.02
1271 1372 2.366916 AGAGATCAATTAGCGGGGACAG 59.633 50.000 0.00 0.00 0.00 3.51
1272 1373 1.417890 AGATCAATTAGCGGGGACAGG 59.582 52.381 0.00 0.00 0.00 4.00
1273 1374 0.179018 ATCAATTAGCGGGGACAGGC 60.179 55.000 0.00 0.00 0.00 4.85
1274 1375 2.180204 CAATTAGCGGGGACAGGCG 61.180 63.158 0.00 0.00 34.49 5.52
1275 1376 3.400599 AATTAGCGGGGACAGGCGG 62.401 63.158 0.00 0.00 34.49 6.13
1295 1396 1.302832 GGGAGGTGTCTGTGCAAGG 60.303 63.158 0.00 0.00 0.00 3.61
1297 1398 1.968540 GAGGTGTCTGTGCAAGGGC 60.969 63.158 0.00 0.00 41.68 5.19
1347 1448 2.049802 CGGCCAAAAGCACTGCTG 60.050 61.111 3.73 0.00 46.50 4.41
1349 1450 1.006922 GGCCAAAAGCACTGCTGAC 60.007 57.895 3.73 0.00 46.50 3.51
1351 1452 1.283793 CCAAAAGCACTGCTGACCG 59.716 57.895 3.73 0.00 39.62 4.79
1352 1453 1.370900 CAAAAGCACTGCTGACCGC 60.371 57.895 3.73 0.00 39.62 5.68
1353 1454 2.896801 AAAAGCACTGCTGACCGCG 61.897 57.895 3.73 0.00 43.27 6.46
1354 1455 4.609018 AAGCACTGCTGACCGCGT 62.609 61.111 3.73 0.00 43.27 6.01
1376 1486 3.629142 CCAATCGGGTAAAGTCTCCTT 57.371 47.619 0.00 0.00 0.00 3.36
1377 1487 4.748277 CCAATCGGGTAAAGTCTCCTTA 57.252 45.455 0.00 0.00 0.00 2.69
1388 1498 3.108847 AGTCTCCTTAAGAGTCCAGGG 57.891 52.381 3.36 0.00 43.71 4.45
1402 1512 0.600557 CCAGGGTAGCTCAGCTATCG 59.399 60.000 10.29 0.00 42.61 2.92
1403 1513 1.610363 CAGGGTAGCTCAGCTATCGA 58.390 55.000 10.29 0.00 42.61 3.59
1405 1515 3.348119 CAGGGTAGCTCAGCTATCGATA 58.652 50.000 10.29 4.78 42.61 2.92
1406 1516 3.376859 CAGGGTAGCTCAGCTATCGATAG 59.623 52.174 25.18 25.18 42.61 2.08
1407 1517 3.009695 AGGGTAGCTCAGCTATCGATAGT 59.990 47.826 28.47 15.55 42.61 2.12
1408 1518 3.759618 GGGTAGCTCAGCTATCGATAGTT 59.240 47.826 28.47 22.39 42.61 2.24
1409 1519 4.142556 GGGTAGCTCAGCTATCGATAGTTC 60.143 50.000 28.47 15.92 42.61 3.01
1410 1520 3.822594 AGCTCAGCTATCGATAGTTCG 57.177 47.619 28.47 18.28 41.34 3.95
1411 1521 3.142951 AGCTCAGCTATCGATAGTTCGT 58.857 45.455 28.47 12.13 41.00 3.85
1414 1524 4.380382 GCTCAGCTATCGATAGTTCGTTTC 59.620 45.833 28.47 13.40 45.65 2.78
1415 1525 5.494632 TCAGCTATCGATAGTTCGTTTCA 57.505 39.130 28.47 6.59 45.65 2.69
1416 1526 6.073327 TCAGCTATCGATAGTTCGTTTCAT 57.927 37.500 28.47 6.05 45.65 2.57
1417 1527 6.143496 TCAGCTATCGATAGTTCGTTTCATC 58.857 40.000 28.47 11.52 45.65 2.92
1418 1528 5.343593 CAGCTATCGATAGTTCGTTTCATCC 59.656 44.000 28.47 11.08 45.65 3.51
1420 1530 3.074504 TCGATAGTTCGTTTCATCCCG 57.925 47.619 0.00 0.00 45.65 5.14
1421 1531 2.124903 CGATAGTTCGTTTCATCCCGG 58.875 52.381 0.00 0.00 40.53 5.73
1422 1532 2.480759 CGATAGTTCGTTTCATCCCGGT 60.481 50.000 0.00 0.00 40.53 5.28
1423 1533 3.528532 GATAGTTCGTTTCATCCCGGTT 58.471 45.455 0.00 0.00 0.00 4.44
1424 1534 2.265589 AGTTCGTTTCATCCCGGTTT 57.734 45.000 0.00 0.00 0.00 3.27
1425 1535 2.578786 AGTTCGTTTCATCCCGGTTTT 58.421 42.857 0.00 0.00 0.00 2.43
1427 1537 3.499537 AGTTCGTTTCATCCCGGTTTTAC 59.500 43.478 0.00 0.00 0.00 2.01
1428 1538 3.405823 TCGTTTCATCCCGGTTTTACT 57.594 42.857 0.00 0.00 0.00 2.24
1430 1540 3.499157 TCGTTTCATCCCGGTTTTACTTG 59.501 43.478 0.00 0.00 0.00 3.16
1431 1541 3.365565 CGTTTCATCCCGGTTTTACTTGG 60.366 47.826 0.00 0.00 0.00 3.61
1432 1542 1.828979 TCATCCCGGTTTTACTTGGC 58.171 50.000 0.00 0.00 0.00 4.52
1434 1544 0.325602 ATCCCGGTTTTACTTGGCGA 59.674 50.000 0.00 0.00 0.00 5.54
1435 1545 0.603439 TCCCGGTTTTACTTGGCGAC 60.603 55.000 0.00 0.00 0.00 5.19
1436 1546 0.604511 CCCGGTTTTACTTGGCGACT 60.605 55.000 0.00 0.00 0.00 4.18
1438 1548 0.794473 CGGTTTTACTTGGCGACTCC 59.206 55.000 0.00 0.00 0.00 3.85
1441 1551 1.061546 TTTTACTTGGCGACTCCCCT 58.938 50.000 0.00 0.00 0.00 4.79
1443 1553 1.601419 TTACTTGGCGACTCCCCTCG 61.601 60.000 0.00 0.00 36.70 4.63
1457 1567 1.371183 CCTCGAGACCCAAACAGCA 59.629 57.895 15.71 0.00 0.00 4.41
1461 1571 1.856265 CGAGACCCAAACAGCAAGGC 61.856 60.000 0.00 0.00 0.00 4.35
1462 1572 1.527433 GAGACCCAAACAGCAAGGCC 61.527 60.000 0.00 0.00 0.00 5.19
1464 1574 3.683937 CCCAAACAGCAAGGCCGG 61.684 66.667 0.00 0.00 0.00 6.13
1466 1576 2.597217 CAAACAGCAAGGCCGGGA 60.597 61.111 2.18 0.00 0.00 5.14
1479 1589 2.123640 CGGGAGGAGGAGGAGGAC 60.124 72.222 0.00 0.00 0.00 3.85
1481 1591 1.707200 GGGAGGAGGAGGAGGACTT 59.293 63.158 0.00 0.00 0.00 3.01
1482 1592 0.397957 GGGAGGAGGAGGAGGACTTC 60.398 65.000 0.00 0.00 0.00 3.01
1483 1593 0.753848 GGAGGAGGAGGAGGACTTCG 60.754 65.000 0.00 0.00 0.00 3.79
1485 1595 2.776913 GGAGGAGGAGGACTTCGCG 61.777 68.421 0.00 0.00 0.00 5.87
1486 1596 2.035940 AGGAGGAGGACTTCGCGT 59.964 61.111 5.77 0.00 0.00 6.01
1488 1598 2.507324 GAGGAGGACTTCGCGTGC 60.507 66.667 5.77 0.00 0.00 5.34
1489 1599 4.421479 AGGAGGACTTCGCGTGCG 62.421 66.667 5.77 8.14 39.22 5.34
1517 1628 1.592223 GTGGTTGCGTCCTAGAGCT 59.408 57.895 0.00 0.00 0.00 4.09
1563 1679 4.867599 GCATCGTCGTCGTCCCCC 62.868 72.222 1.33 0.00 38.33 5.40
1683 1799 1.157870 CGACGCTGACCAAGGTGTTT 61.158 55.000 0.00 0.00 0.00 2.83
1686 1802 0.307760 CGCTGACCAAGGTGTTTGTC 59.692 55.000 0.00 0.00 34.87 3.18
1782 1898 1.585261 CGTCATCACCGATCGCGAA 60.585 57.895 15.24 0.00 40.82 4.70
2061 2181 1.273606 GCAGAGAGGTGAGCAACAGTA 59.726 52.381 0.00 0.00 0.00 2.74
2062 2182 2.093764 GCAGAGAGGTGAGCAACAGTAT 60.094 50.000 0.00 0.00 0.00 2.12
2063 2183 3.131223 GCAGAGAGGTGAGCAACAGTATA 59.869 47.826 0.00 0.00 0.00 1.47
2064 2184 4.382040 GCAGAGAGGTGAGCAACAGTATAA 60.382 45.833 0.00 0.00 0.00 0.98
2065 2185 5.105752 CAGAGAGGTGAGCAACAGTATAAC 58.894 45.833 0.00 0.00 0.00 1.89
2099 2220 3.429410 CGAATCAATGCCCTCCTTTTTCC 60.429 47.826 0.00 0.00 0.00 3.13
2100 2221 1.937191 TCAATGCCCTCCTTTTTCCC 58.063 50.000 0.00 0.00 0.00 3.97
2146 2267 4.362279 CATGTGCATGGCAGTAAATAACC 58.638 43.478 4.35 0.00 40.08 2.85
2213 2334 0.102481 TTGATTAGGGCTCGCGTCTC 59.898 55.000 5.77 0.00 0.00 3.36
2227 2348 1.404035 GCGTCTCTCCTTCTCCTTCTC 59.596 57.143 0.00 0.00 0.00 2.87
2228 2349 2.021457 CGTCTCTCCTTCTCCTTCTCC 58.979 57.143 0.00 0.00 0.00 3.71
2229 2350 2.356741 CGTCTCTCCTTCTCCTTCTCCT 60.357 54.545 0.00 0.00 0.00 3.69
2230 2351 3.288092 GTCTCTCCTTCTCCTTCTCCTC 58.712 54.545 0.00 0.00 0.00 3.71
2232 2353 2.244769 CTCTCCTTCTCCTTCTCCTCCT 59.755 54.545 0.00 0.00 0.00 3.69
2233 2354 2.243736 TCTCCTTCTCCTTCTCCTCCTC 59.756 54.545 0.00 0.00 0.00 3.71
2236 2358 2.516277 CCTTCTCCTTCTCCTCCTCCTA 59.484 54.545 0.00 0.00 0.00 2.94
2278 2400 6.071503 CGGGTTAGGATAAGAGGATCGTTAAT 60.072 42.308 0.00 0.00 42.67 1.40
2279 2401 7.097834 GGGTTAGGATAAGAGGATCGTTAATG 58.902 42.308 0.00 0.00 42.67 1.90
2280 2402 7.097834 GGTTAGGATAAGAGGATCGTTAATGG 58.902 42.308 0.00 0.00 42.67 3.16
2281 2403 5.153950 AGGATAAGAGGATCGTTAATGGC 57.846 43.478 0.00 0.00 42.67 4.40
2282 2404 4.020128 AGGATAAGAGGATCGTTAATGGCC 60.020 45.833 0.00 0.00 42.67 5.36
2284 2406 0.393077 AGAGGATCGTTAATGGCCGG 59.607 55.000 0.00 0.00 42.67 6.13
2285 2407 0.391597 GAGGATCGTTAATGGCCGGA 59.608 55.000 5.05 0.00 0.00 5.14
2286 2408 0.106149 AGGATCGTTAATGGCCGGAC 59.894 55.000 5.05 0.56 0.00 4.79
2287 2409 1.219522 GGATCGTTAATGGCCGGACG 61.220 60.000 5.05 4.92 36.89 4.79
2288 2410 1.219522 GATCGTTAATGGCCGGACGG 61.220 60.000 5.05 6.35 36.27 4.79
2289 2411 2.653953 ATCGTTAATGGCCGGACGGG 62.654 60.000 5.05 3.74 36.27 5.28
2447 2578 4.220413 CCTCATGGCTGTGCTCTG 57.780 61.111 0.00 0.00 0.00 3.35
2448 2579 2.113433 CCTCATGGCTGTGCTCTGC 61.113 63.158 8.93 8.93 37.71 4.26
2449 2580 1.078356 CTCATGGCTGTGCTCTGCT 60.078 57.895 15.77 0.00 38.34 4.24
2450 2581 1.369839 CTCATGGCTGTGCTCTGCTG 61.370 60.000 15.77 8.59 38.34 4.41
2451 2582 2.045242 ATGGCTGTGCTCTGCTGG 60.045 61.111 15.77 0.00 38.34 4.85
2527 2658 7.470289 CTGCTATACAGTACTGATTTTGACC 57.530 40.000 29.30 9.56 41.86 4.02
2533 2709 5.227908 ACAGTACTGATTTTGACCACTACG 58.772 41.667 29.30 0.00 0.00 3.51
2561 2737 2.046892 CACTCCGGCCTCCACAAG 60.047 66.667 0.00 0.00 0.00 3.16
2562 2738 2.526873 ACTCCGGCCTCCACAAGT 60.527 61.111 0.00 0.00 0.00 3.16
2652 2833 7.041030 TGCCTGAAGATATAACTAGAGTTCTCG 60.041 40.741 0.00 0.00 39.31 4.04
2684 2871 6.762661 ACATATGCCAATTTCATGGTTAAAGC 59.237 34.615 1.58 0.00 42.75 3.51
2709 2896 6.935741 TGGAAACATTGATATAGAAACCCG 57.064 37.500 0.00 0.00 33.40 5.28
2714 2901 8.795842 AAACATTGATATAGAAACCCGTTACA 57.204 30.769 0.00 0.00 0.00 2.41
2848 3050 1.427819 CGGGAATGCGGTGTAAAGC 59.572 57.895 0.00 0.00 0.00 3.51
2980 3190 1.762370 CTTGGCCTTTGACAGGGTTTT 59.238 47.619 3.32 0.00 44.16 2.43
2984 3194 2.557056 GGCCTTTGACAGGGTTTTAGTC 59.443 50.000 0.00 0.00 44.16 2.59
2991 3201 1.423921 ACAGGGTTTTAGTCTGGTGGG 59.576 52.381 0.00 0.00 33.19 4.61
2997 3207 3.497942 GGTTTTAGTCTGGTGGGTGTCAT 60.498 47.826 0.00 0.00 0.00 3.06
2998 3208 3.417069 TTTAGTCTGGTGGGTGTCATG 57.583 47.619 0.00 0.00 0.00 3.07
2999 3209 2.024176 TAGTCTGGTGGGTGTCATGT 57.976 50.000 0.00 0.00 0.00 3.21
3000 3210 0.687354 AGTCTGGTGGGTGTCATGTC 59.313 55.000 0.00 0.00 0.00 3.06
3001 3211 0.396435 GTCTGGTGGGTGTCATGTCA 59.604 55.000 0.00 0.00 0.00 3.58
3002 3212 1.135960 TCTGGTGGGTGTCATGTCAA 58.864 50.000 0.00 0.00 0.00 3.18
3004 3214 0.533978 TGGTGGGTGTCATGTCAACG 60.534 55.000 1.85 0.00 0.00 4.10
3005 3215 0.250124 GGTGGGTGTCATGTCAACGA 60.250 55.000 1.85 0.00 0.00 3.85
3007 3217 0.602638 TGGGTGTCATGTCAACGAGC 60.603 55.000 1.85 0.00 0.00 5.03
3008 3218 1.298859 GGGTGTCATGTCAACGAGCC 61.299 60.000 1.85 0.00 0.00 4.70
3009 3219 1.298859 GGTGTCATGTCAACGAGCCC 61.299 60.000 0.00 0.00 0.00 5.19
3010 3220 0.602638 GTGTCATGTCAACGAGCCCA 60.603 55.000 0.00 0.00 0.00 5.36
3011 3221 0.320683 TGTCATGTCAACGAGCCCAG 60.321 55.000 0.00 0.00 0.00 4.45
3025 3235 5.148502 ACGAGCCCAGGGGAATATATATAG 58.851 45.833 7.91 0.00 37.50 1.31
3057 3267 2.798976 TGTTGCTTGGATTGCTTCAC 57.201 45.000 0.00 0.00 0.00 3.18
3087 3297 3.665323 CGTTTGCTTGAATTGGTCTCTCG 60.665 47.826 0.00 0.00 0.00 4.04
3095 3305 6.037610 GCTTGAATTGGTCTCTCGTGATATTT 59.962 38.462 0.00 0.00 0.00 1.40
3096 3306 7.539712 TTGAATTGGTCTCTCGTGATATTTC 57.460 36.000 0.00 0.00 0.00 2.17
3128 3338 9.072294 GTGTTACTTTATTGATTCGGGATTTTG 57.928 33.333 0.00 0.00 0.00 2.44
3130 3340 5.339990 ACTTTATTGATTCGGGATTTTGCG 58.660 37.500 0.00 0.00 0.00 4.85
3133 3343 0.808125 TGATTCGGGATTTTGCGTGG 59.192 50.000 0.00 0.00 0.00 4.94
3137 3347 2.625823 CGGGATTTTGCGTGGTGCT 61.626 57.895 0.00 0.00 46.63 4.40
3173 3384 1.209127 GAACGGCGGTGTTCATTGG 59.791 57.895 13.24 0.00 45.92 3.16
3175 3386 1.234615 AACGGCGGTGTTCATTGGAG 61.235 55.000 13.24 0.00 0.00 3.86
3176 3387 2.877691 GGCGGTGTTCATTGGAGC 59.122 61.111 0.00 0.00 0.00 4.70
3183 3394 3.416156 GGTGTTCATTGGAGCTTTCTCT 58.584 45.455 0.00 0.00 39.31 3.10
3218 3429 7.894753 TCATGATAGAATAATTGGGTTTGCA 57.105 32.000 0.00 0.00 0.00 4.08
3219 3430 8.481492 TCATGATAGAATAATTGGGTTTGCAT 57.519 30.769 0.00 0.00 0.00 3.96
3220 3431 9.585369 TCATGATAGAATAATTGGGTTTGCATA 57.415 29.630 0.00 0.00 0.00 3.14
3353 3590 5.766222 CATTATTTGGCACTGCTCTAATCC 58.234 41.667 0.00 0.00 0.00 3.01
3354 3591 1.737838 TTTGGCACTGCTCTAATCCG 58.262 50.000 0.00 0.00 0.00 4.18
3355 3592 0.744414 TTGGCACTGCTCTAATCCGC 60.744 55.000 0.00 0.00 0.00 5.54
3356 3593 2.240500 GGCACTGCTCTAATCCGCG 61.241 63.158 0.00 0.00 0.00 6.46
3362 3601 1.082496 GCTCTAATCCGCGCAATGC 60.082 57.895 8.75 0.00 41.47 3.56
3378 3617 3.735746 GCAATGCGCATATAAAGAAACCC 59.264 43.478 25.61 0.00 41.79 4.11
3384 3623 3.315191 CGCATATAAAGAAACCCCCACAG 59.685 47.826 0.00 0.00 0.00 3.66
3391 3630 0.771755 GAAACCCCCACAGTTCCTCT 59.228 55.000 0.00 0.00 0.00 3.69
3464 3704 4.365514 TGGTAAAAATGCAGACAGAGGA 57.634 40.909 0.00 0.00 0.00 3.71
3477 3717 0.036952 CAGAGGAACACATCTGGCGT 60.037 55.000 0.00 0.00 39.42 5.68
3481 3721 0.321653 GGAACACATCTGGCGTCCTT 60.322 55.000 0.00 0.00 0.00 3.36
3484 3724 0.687354 ACACATCTGGCGTCCTTTCT 59.313 50.000 0.00 0.00 0.00 2.52
3486 3726 1.734465 CACATCTGGCGTCCTTTCTTC 59.266 52.381 0.00 0.00 0.00 2.87
3487 3727 1.339151 ACATCTGGCGTCCTTTCTTCC 60.339 52.381 0.00 0.00 0.00 3.46
3490 3730 1.420138 TCTGGCGTCCTTTCTTCCTTT 59.580 47.619 0.00 0.00 0.00 3.11
3491 3731 1.807142 CTGGCGTCCTTTCTTCCTTTC 59.193 52.381 0.00 0.00 0.00 2.62
3492 3732 1.142060 TGGCGTCCTTTCTTCCTTTCA 59.858 47.619 0.00 0.00 0.00 2.69
3496 3736 3.502211 GCGTCCTTTCTTCCTTTCATGAA 59.498 43.478 3.38 3.38 0.00 2.57
3500 3744 6.000840 GTCCTTTCTTCCTTTCATGAAGACT 58.999 40.000 8.41 0.00 45.79 3.24
3514 3758 4.156455 TGAAGACTGAAAGGTTTCTGCT 57.844 40.909 8.73 5.36 39.30 4.24
3522 3766 3.758554 TGAAAGGTTTCTGCTAGGCAATC 59.241 43.478 4.19 0.00 38.41 2.67
3523 3767 3.439857 AAGGTTTCTGCTAGGCAATCA 57.560 42.857 0.00 0.00 38.41 2.57
3525 3769 3.084786 AGGTTTCTGCTAGGCAATCAAC 58.915 45.455 0.00 0.00 38.41 3.18
3528 3772 4.700213 GGTTTCTGCTAGGCAATCAACTAA 59.300 41.667 0.00 0.00 38.41 2.24
3532 3776 4.019321 TCTGCTAGGCAATCAACTAACCTT 60.019 41.667 0.00 0.00 38.41 3.50
3533 3777 4.662278 TGCTAGGCAATCAACTAACCTTT 58.338 39.130 0.00 0.00 34.76 3.11
3539 3783 5.011023 AGGCAATCAACTAACCTTTGGAAAG 59.989 40.000 0.00 0.00 35.79 2.62
3540 3784 5.010617 GGCAATCAACTAACCTTTGGAAAGA 59.989 40.000 0.47 0.00 38.28 2.52
3541 3785 6.295292 GGCAATCAACTAACCTTTGGAAAGAT 60.295 38.462 0.47 0.00 38.28 2.40
3542 3786 7.093945 GGCAATCAACTAACCTTTGGAAAGATA 60.094 37.037 0.47 0.00 38.28 1.98
3543 3787 8.470002 GCAATCAACTAACCTTTGGAAAGATAT 58.530 33.333 0.47 0.00 38.28 1.63
3575 3819 2.987752 GGAAATCATCCGTCCGTCC 58.012 57.895 0.00 0.00 38.79 4.79
3576 3820 0.874607 GGAAATCATCCGTCCGTCCG 60.875 60.000 0.00 0.00 38.79 4.79
3605 3857 1.675310 CATGCATGTGTGTCCCGGT 60.675 57.895 18.91 0.00 0.00 5.28
3606 3858 1.675310 ATGCATGTGTGTCCCGGTG 60.675 57.895 0.00 0.00 0.00 4.94
3611 3863 2.515057 GTGTGTCCCGGTGCAACA 60.515 61.111 0.98 0.00 39.98 3.33
3612 3864 1.896660 GTGTGTCCCGGTGCAACAT 60.897 57.895 0.98 0.00 39.98 2.71
3613 3865 1.896183 TGTGTCCCGGTGCAACATG 60.896 57.895 0.98 0.00 39.98 3.21
3614 3866 2.282110 TGTCCCGGTGCAACATGG 60.282 61.111 0.98 0.86 39.98 3.66
3615 3867 2.033448 GTCCCGGTGCAACATGGA 59.967 61.111 0.98 3.86 39.98 3.41
3616 3868 2.040544 GTCCCGGTGCAACATGGAG 61.041 63.158 10.16 0.00 38.49 3.86
3617 3869 2.034066 CCCGGTGCAACATGGAGT 59.966 61.111 0.98 0.00 39.98 3.85
3618 3870 1.603455 CCCGGTGCAACATGGAGTT 60.603 57.895 0.98 0.00 42.42 3.01
3642 3894 2.949644 GTGGTAGGGCACATGGTATTTC 59.050 50.000 0.00 0.00 0.00 2.17
3809 4061 0.106268 TTCCTCTGCAGCCCAACAAA 60.106 50.000 9.47 0.00 0.00 2.83
3811 4063 0.971386 CCTCTGCAGCCCAACAAAAT 59.029 50.000 9.47 0.00 0.00 1.82
3812 4064 2.170166 CCTCTGCAGCCCAACAAAATA 58.830 47.619 9.47 0.00 0.00 1.40
3817 4069 2.035704 TGCAGCCCAACAAAATAGTGTG 59.964 45.455 0.00 0.00 0.00 3.82
3837 4147 8.970691 AGTGTGACATGTCTAAATTATTTTGC 57.029 30.769 25.55 0.00 0.00 3.68
3839 4149 9.065871 GTGTGACATGTCTAAATTATTTTGCTC 57.934 33.333 25.55 0.00 0.00 4.26
3964 4443 1.737793 GCCATGTTCTACAACCCTTCG 59.262 52.381 0.00 0.00 0.00 3.79
3996 4475 1.705186 AGTGCCATATCCCCATGTACC 59.295 52.381 0.00 0.00 0.00 3.34
3997 4476 1.423541 GTGCCATATCCCCATGTACCA 59.576 52.381 0.00 0.00 0.00 3.25
3998 4477 1.423541 TGCCATATCCCCATGTACCAC 59.576 52.381 0.00 0.00 0.00 4.16
3999 4478 1.705186 GCCATATCCCCATGTACCACT 59.295 52.381 0.00 0.00 0.00 4.00
4000 4479 2.553028 GCCATATCCCCATGTACCACTG 60.553 54.545 0.00 0.00 0.00 3.66
4001 4480 2.553028 CCATATCCCCATGTACCACTGC 60.553 54.545 0.00 0.00 0.00 4.40
4002 4481 1.136828 TATCCCCATGTACCACTGCC 58.863 55.000 0.00 0.00 0.00 4.85
4024 4524 7.004691 TGCCTACTGTCTACTGTATGTATCAT 58.995 38.462 1.03 0.00 31.43 2.45
4032 4532 8.406297 TGTCTACTGTATGTATCATTGTCAGTC 58.594 37.037 13.29 5.95 36.36 3.51
4048 4548 0.725117 AGTCCCGCTTTAAAATCGCG 59.275 50.000 12.02 12.02 45.86 5.87
4049 4549 0.445043 GTCCCGCTTTAAAATCGCGT 59.555 50.000 16.17 0.00 44.92 6.01
4054 4554 1.055753 CGCTTTAAAATCGCGTTGCAC 59.944 47.619 5.77 0.00 41.78 4.57
4072 4572 2.603110 GCACCATCGTACACTACACATG 59.397 50.000 0.00 0.00 0.00 3.21
4124 4624 0.896940 CTCACTTGGGCAGGTGCAAT 60.897 55.000 4.01 0.00 44.36 3.56
4125 4625 1.180456 TCACTTGGGCAGGTGCAATG 61.180 55.000 4.01 0.00 44.36 2.82
4133 4633 1.290955 CAGGTGCAATGCCTGTTGG 59.709 57.895 12.60 0.00 46.22 3.77
4149 4649 3.142951 TGTTGGTAATGTCCCAGTTTCG 58.857 45.455 0.00 0.00 32.49 3.46
4150 4650 3.143728 GTTGGTAATGTCCCAGTTTCGT 58.856 45.455 0.00 0.00 32.49 3.85
4151 4651 4.202336 TGTTGGTAATGTCCCAGTTTCGTA 60.202 41.667 0.00 0.00 32.49 3.43
4228 4748 3.253061 TGACCGGCCCCATGTCAA 61.253 61.111 0.00 0.00 36.16 3.18
4229 4749 2.438434 GACCGGCCCCATGTCAAG 60.438 66.667 0.00 0.00 0.00 3.02
4242 4762 3.319755 CATGTCAAGGTGGTTGCATTTC 58.680 45.455 0.00 0.00 35.94 2.17
4248 4768 1.202758 AGGTGGTTGCATTTCTCGTGA 60.203 47.619 0.00 0.00 0.00 4.35
4250 4770 2.159517 GGTGGTTGCATTTCTCGTGATC 60.160 50.000 0.00 0.00 0.00 2.92
4254 4774 1.372582 TGCATTTCTCGTGATCCAGC 58.627 50.000 0.00 0.00 0.00 4.85
4255 4775 1.338960 TGCATTTCTCGTGATCCAGCA 60.339 47.619 0.00 0.00 0.00 4.41
4293 4821 7.860872 CCTGAGGTAAATTAGTTTGTGTTTGAC 59.139 37.037 0.00 0.00 0.00 3.18
4332 4860 6.095720 ACAATAGACAACTACTCCTAGACAGC 59.904 42.308 0.00 0.00 0.00 4.40
4333 4861 4.310022 AGACAACTACTCCTAGACAGCT 57.690 45.455 0.00 0.00 0.00 4.24
4334 4862 5.438698 AGACAACTACTCCTAGACAGCTA 57.561 43.478 0.00 0.00 0.00 3.32
4335 4863 5.433526 AGACAACTACTCCTAGACAGCTAG 58.566 45.833 0.00 0.00 43.08 3.42
4336 4864 5.190132 AGACAACTACTCCTAGACAGCTAGA 59.810 44.000 0.00 0.00 45.71 2.43
4337 4865 5.187687 ACAACTACTCCTAGACAGCTAGAC 58.812 45.833 0.00 0.00 45.71 2.59
4338 4866 5.045432 ACAACTACTCCTAGACAGCTAGACT 60.045 44.000 0.00 0.00 45.71 3.24
4384 4912 3.399330 AGGAACCAACATAGACGTTGTG 58.601 45.455 0.00 0.00 43.89 3.33
4387 4915 0.802494 CCAACATAGACGTTGTGGGC 59.198 55.000 0.00 0.00 43.89 5.36
4393 4921 0.391130 TAGACGTTGTGGGCTGCATC 60.391 55.000 0.50 0.00 0.00 3.91
4406 4934 1.068055 GCTGCATCTTTGTGGTTCAGG 60.068 52.381 0.00 0.00 0.00 3.86
4409 4937 1.815003 GCATCTTTGTGGTTCAGGGAG 59.185 52.381 0.00 0.00 0.00 4.30
4414 4942 0.038166 TTGTGGTTCAGGGAGATGCC 59.962 55.000 0.00 0.00 0.00 4.40
4426 4957 0.108207 GAGATGCCCATCCTGAGGTG 59.892 60.000 0.00 0.00 38.58 4.00
4442 4973 3.007940 TGAGGTGAACAGTTTGATCCGAT 59.992 43.478 0.00 0.00 0.00 4.18
4443 4974 3.338249 AGGTGAACAGTTTGATCCGATG 58.662 45.455 0.00 0.00 0.00 3.84
4445 4976 2.083774 TGAACAGTTTGATCCGATGGC 58.916 47.619 0.00 0.00 0.00 4.40
4448 4979 1.206132 ACAGTTTGATCCGATGGCGTA 59.794 47.619 0.00 0.00 35.23 4.42
4450 4981 2.285220 CAGTTTGATCCGATGGCGTAAG 59.715 50.000 0.00 0.00 35.23 2.34
4451 4982 2.093658 AGTTTGATCCGATGGCGTAAGT 60.094 45.455 0.00 0.00 41.68 2.24
4452 4983 3.131577 AGTTTGATCCGATGGCGTAAGTA 59.868 43.478 0.00 0.00 41.68 2.24
4454 4985 2.578786 TGATCCGATGGCGTAAGTAGA 58.421 47.619 0.00 0.00 41.68 2.59
4455 4986 2.292569 TGATCCGATGGCGTAAGTAGAC 59.707 50.000 0.00 0.00 41.68 2.59
4456 4987 1.753930 TCCGATGGCGTAAGTAGACA 58.246 50.000 0.00 0.00 41.68 3.41
4463 4994 3.359033 TGGCGTAAGTAGACACACCTAT 58.641 45.455 0.00 0.00 41.68 2.57
4464 4995 4.525996 TGGCGTAAGTAGACACACCTATA 58.474 43.478 0.00 0.00 41.68 1.31
4470 5001 6.018098 CGTAAGTAGACACACCTATACTCCTG 60.018 46.154 0.00 0.00 0.00 3.86
4474 5005 3.269906 AGACACACCTATACTCCTGGACT 59.730 47.826 0.00 0.00 0.00 3.85
4499 5079 2.028385 ACCGGTGGTAGTTGCTCTTTAG 60.028 50.000 6.12 0.00 32.11 1.85
4544 5138 1.226435 CGACTGACTAGACGCTGCC 60.226 63.158 0.00 0.00 35.54 4.85
4617 5211 1.497722 CGCAGAGCTTTCGGTTTCC 59.502 57.895 0.00 0.00 0.00 3.13
4640 5234 1.376037 CCGCTTCCTTGACTGGACC 60.376 63.158 0.00 0.00 35.58 4.46
4738 5351 2.067365 GGGAGGCCCGTTCATAAATT 57.933 50.000 0.00 0.00 32.13 1.82
4745 5358 1.602377 CCCGTTCATAAATTCGGCCTC 59.398 52.381 0.00 0.00 41.38 4.70
4746 5359 1.260561 CCGTTCATAAATTCGGCCTCG 59.739 52.381 0.00 0.00 36.68 4.63
4747 5360 1.260561 CGTTCATAAATTCGGCCTCGG 59.739 52.381 0.00 0.00 36.95 4.63
4873 5494 3.964875 CTGCGCACCGTTGGCTTT 61.965 61.111 5.66 0.00 0.00 3.51
4874 5495 4.263209 TGCGCACCGTTGGCTTTG 62.263 61.111 5.66 0.00 0.00 2.77
5011 5644 0.459489 TTTATTGGAATGGGCAGCGC 59.541 50.000 0.00 0.00 0.00 5.92
5021 5654 2.107141 GGCAGCGCCTAGTACAGG 59.893 66.667 2.29 1.15 46.69 4.00
5050 5683 0.107654 CAGGATTCCTTGACCGGTCC 60.108 60.000 31.19 14.30 0.00 4.46
5070 5706 2.159142 CCGTCCAGGAACATGTACTACC 60.159 54.545 0.00 0.86 45.00 3.18
5079 5715 5.307196 AGGAACATGTACTACCACTTGAGTT 59.693 40.000 0.00 0.00 0.00 3.01
5087 5723 3.877508 ACTACCACTTGAGTTGTTTCTGC 59.122 43.478 0.00 0.00 0.00 4.26
5089 5725 2.684881 ACCACTTGAGTTGTTTCTGCAG 59.315 45.455 7.63 7.63 0.00 4.41
5091 5727 2.945008 CACTTGAGTTGTTTCTGCAGGA 59.055 45.455 15.13 0.46 0.00 3.86
5092 5728 3.378112 CACTTGAGTTGTTTCTGCAGGAA 59.622 43.478 15.13 9.08 0.00 3.36
5093 5729 4.016444 ACTTGAGTTGTTTCTGCAGGAAA 58.984 39.130 9.61 8.05 41.11 3.13
5149 5791 9.775854 ATTTCTACTCATATATGCATAGCCATC 57.224 33.333 12.79 0.00 0.00 3.51
5152 5794 5.840715 ACTCATATATGCATAGCCATCTCG 58.159 41.667 12.79 0.00 0.00 4.04
5175 5817 6.910433 TCGTTTCTCTTTAGTGCAATTTTGTC 59.090 34.615 0.00 0.00 0.00 3.18
5179 5849 5.179368 TCTCTTTAGTGCAATTTTGTCGAGG 59.821 40.000 0.00 0.00 0.00 4.63
5198 5868 1.266989 GGCAACCAGCTGTGTTTAGAC 59.733 52.381 13.81 4.48 44.79 2.59
5236 5908 4.933400 GCTTCCGTTATGAAAACAGGAGTA 59.067 41.667 0.00 0.00 0.00 2.59
5241 5913 7.669427 TCCGTTATGAAAACAGGAGTACTAAA 58.331 34.615 0.00 0.00 0.00 1.85
5242 5914 8.316214 TCCGTTATGAAAACAGGAGTACTAAAT 58.684 33.333 0.00 0.00 0.00 1.40
5245 5917 6.759497 ATGAAAACAGGAGTACTAAATGCC 57.241 37.500 0.00 0.00 0.00 4.40
5247 5919 5.705441 TGAAAACAGGAGTACTAAATGCCAG 59.295 40.000 0.00 0.00 0.00 4.85
5249 5921 6.368779 AAACAGGAGTACTAAATGCCAGTA 57.631 37.500 0.00 0.00 0.00 2.74
5303 7811 5.297776 GGAGTGTTCATTTGATATGGTCCTG 59.702 44.000 0.00 0.00 0.00 3.86
5323 7876 2.625790 TGGTTTTACAGCCATGGTTGTC 59.374 45.455 34.21 20.84 40.03 3.18
5341 7894 5.274718 GTTGTCGGTACATATGTCTCTGAG 58.725 45.833 12.68 0.00 34.97 3.35
5342 7895 4.777463 TGTCGGTACATATGTCTCTGAGA 58.223 43.478 12.68 12.50 0.00 3.27
5345 7898 8.802023 TTGTCGGTACATATGTCTCTGAGAGAC 61.802 44.444 30.49 30.49 45.57 3.36
5363 7916 0.108138 ACAATAGTGGGCTCGTGCTC 60.108 55.000 9.61 5.81 40.87 4.26
5379 7932 1.749033 CTCGGCTTGACCCCTATCC 59.251 63.158 0.00 0.00 33.26 2.59
5380 7933 1.002403 TCGGCTTGACCCCTATCCA 59.998 57.895 0.00 0.00 33.26 3.41
5385 7938 2.224646 GGCTTGACCCCTATCCATCTTC 60.225 54.545 0.00 0.00 0.00 2.87
5389 7942 5.163195 GCTTGACCCCTATCCATCTTCTTAA 60.163 44.000 0.00 0.00 0.00 1.85
5390 7943 5.888982 TGACCCCTATCCATCTTCTTAAC 57.111 43.478 0.00 0.00 0.00 2.01
5396 7949 5.397899 CCCTATCCATCTTCTTAACAAGGCA 60.398 44.000 0.00 0.00 0.00 4.75
5506 8059 9.567848 TCAAGTTTGTCATTTCTCTTGTTTTAC 57.432 29.630 0.00 0.00 35.35 2.01
5545 8098 4.893608 TGCAACTTTGTACATCAGCTCTA 58.106 39.130 0.00 0.00 0.00 2.43
5546 8099 5.304778 TGCAACTTTGTACATCAGCTCTAA 58.695 37.500 0.00 0.00 0.00 2.10
5547 8100 5.939883 TGCAACTTTGTACATCAGCTCTAAT 59.060 36.000 0.00 0.00 0.00 1.73
5548 8101 6.128200 TGCAACTTTGTACATCAGCTCTAATG 60.128 38.462 0.00 0.00 0.00 1.90
5551 8104 7.602517 ACTTTGTACATCAGCTCTAATGAAC 57.397 36.000 0.00 0.00 0.00 3.18
5571 8124 2.373836 ACACCAGCAGTACCCAACATAA 59.626 45.455 0.00 0.00 0.00 1.90
5573 8126 3.823873 CACCAGCAGTACCCAACATAAAA 59.176 43.478 0.00 0.00 0.00 1.52
5574 8127 4.079253 ACCAGCAGTACCCAACATAAAAG 58.921 43.478 0.00 0.00 0.00 2.27
5575 8128 3.443681 CCAGCAGTACCCAACATAAAAGG 59.556 47.826 0.00 0.00 0.00 3.11
5577 8130 4.396166 CAGCAGTACCCAACATAAAAGGAG 59.604 45.833 0.00 0.00 0.00 3.69
5578 8131 3.128764 GCAGTACCCAACATAAAAGGAGC 59.871 47.826 0.00 0.00 0.00 4.70
5585 8138 4.142381 CCCAACATAAAAGGAGCAAGTAGC 60.142 45.833 0.00 0.00 46.19 3.58
5598 8164 4.849111 GCAAGTAGCACATTCTAGTGTC 57.151 45.455 0.00 0.00 44.79 3.67
5599 8165 3.619038 GCAAGTAGCACATTCTAGTGTCC 59.381 47.826 0.00 0.00 44.79 4.02
5600 8166 3.784701 AGTAGCACATTCTAGTGTCCG 57.215 47.619 0.00 0.00 41.52 4.79
5603 8169 1.066858 AGCACATTCTAGTGTCCGTGG 60.067 52.381 0.00 0.00 41.52 4.94
5607 8173 3.442625 CACATTCTAGTGTCCGTGGTCTA 59.557 47.826 0.00 0.00 34.83 2.59
5608 8174 4.098044 CACATTCTAGTGTCCGTGGTCTAT 59.902 45.833 0.00 0.00 34.83 1.98
5612 8178 7.069578 ACATTCTAGTGTCCGTGGTCTATAATT 59.930 37.037 0.00 0.00 0.00 1.40
5621 8187 7.713507 TGTCCGTGGTCTATAATTAGGATTTTG 59.286 37.037 0.00 0.00 0.00 2.44
5622 8188 7.929785 GTCCGTGGTCTATAATTAGGATTTTGA 59.070 37.037 0.00 0.00 0.00 2.69
5640 8233 8.490355 GGATTTTGAAAAACTAGCAATGTTCAG 58.510 33.333 0.00 0.00 0.00 3.02
5653 8246 4.730949 AATGTTCAGCATTGGATCTTGG 57.269 40.909 0.00 0.00 45.35 3.61
5654 8247 3.438216 TGTTCAGCATTGGATCTTGGA 57.562 42.857 0.00 0.00 0.00 3.53
5655 8248 3.972133 TGTTCAGCATTGGATCTTGGAT 58.028 40.909 0.00 0.00 0.00 3.41
5656 8249 3.949754 TGTTCAGCATTGGATCTTGGATC 59.050 43.478 0.00 0.00 0.00 3.36
5657 8250 2.842457 TCAGCATTGGATCTTGGATCG 58.158 47.619 0.00 0.00 0.00 3.69
5658 8251 1.878088 CAGCATTGGATCTTGGATCGG 59.122 52.381 0.00 0.00 0.00 4.18
5659 8252 1.492176 AGCATTGGATCTTGGATCGGT 59.508 47.619 0.00 0.00 0.00 4.69
5660 8253 2.092212 AGCATTGGATCTTGGATCGGTT 60.092 45.455 0.00 0.00 0.00 4.44
5661 8254 2.291741 GCATTGGATCTTGGATCGGTTC 59.708 50.000 0.00 0.00 0.00 3.62
5662 8255 3.544684 CATTGGATCTTGGATCGGTTCA 58.455 45.455 0.00 0.00 0.00 3.18
5669 8265 3.808728 TCTTGGATCGGTTCATGGATTC 58.191 45.455 0.00 0.00 0.00 2.52
5670 8266 3.455910 TCTTGGATCGGTTCATGGATTCT 59.544 43.478 0.00 0.00 0.00 2.40
5671 8267 3.198409 TGGATCGGTTCATGGATTCTG 57.802 47.619 0.00 0.00 0.00 3.02
5672 8268 2.505407 TGGATCGGTTCATGGATTCTGT 59.495 45.455 0.00 0.00 0.00 3.41
5673 8269 3.054434 TGGATCGGTTCATGGATTCTGTT 60.054 43.478 0.00 0.00 0.00 3.16
5675 8271 4.399303 GGATCGGTTCATGGATTCTGTTTT 59.601 41.667 0.00 0.00 0.00 2.43
5677 8273 3.505680 TCGGTTCATGGATTCTGTTTTGG 59.494 43.478 0.00 0.00 0.00 3.28
5683 8279 7.093771 GGTTCATGGATTCTGTTTTGGATTAGT 60.094 37.037 0.00 0.00 0.00 2.24
5684 8280 8.306761 GTTCATGGATTCTGTTTTGGATTAGTT 58.693 33.333 0.00 0.00 0.00 2.24
5687 8283 9.573133 CATGGATTCTGTTTTGGATTAGTTAAC 57.427 33.333 0.00 0.00 0.00 2.01
5695 8291 8.068892 TGTTTTGGATTAGTTAACCACAAGTT 57.931 30.769 0.88 0.00 42.83 2.66
5701 8297 7.442969 TGGATTAGTTAACCACAAGTTACACAG 59.557 37.037 0.88 0.00 40.70 3.66
5703 8299 8.967664 ATTAGTTAACCACAAGTTACACAGAA 57.032 30.769 0.88 0.00 40.70 3.02
5708 8304 5.437060 AACCACAAGTTACACAGAATGTCT 58.563 37.500 0.00 0.00 42.97 3.41
5744 8340 4.159693 CACTAGCACAATACAGACCCACTA 59.840 45.833 0.00 0.00 0.00 2.74
5745 8341 3.895232 AGCACAATACAGACCCACTAG 57.105 47.619 0.00 0.00 0.00 2.57
5746 8342 2.093447 AGCACAATACAGACCCACTAGC 60.093 50.000 0.00 0.00 0.00 3.42
5750 8346 4.631813 CACAATACAGACCCACTAGCTTTC 59.368 45.833 0.00 0.00 0.00 2.62
5751 8347 4.192317 CAATACAGACCCACTAGCTTTCC 58.808 47.826 0.00 0.00 0.00 3.13
5752 8348 1.729586 ACAGACCCACTAGCTTTCCA 58.270 50.000 0.00 0.00 0.00 3.53
5753 8349 2.269940 ACAGACCCACTAGCTTTCCAT 58.730 47.619 0.00 0.00 0.00 3.41
5754 8350 2.644798 ACAGACCCACTAGCTTTCCATT 59.355 45.455 0.00 0.00 0.00 3.16
5755 8351 3.274288 CAGACCCACTAGCTTTCCATTC 58.726 50.000 0.00 0.00 0.00 2.67
5756 8352 2.093447 AGACCCACTAGCTTTCCATTCG 60.093 50.000 0.00 0.00 0.00 3.34
5757 8353 1.906574 ACCCACTAGCTTTCCATTCGA 59.093 47.619 0.00 0.00 0.00 3.71
5758 8354 2.093447 ACCCACTAGCTTTCCATTCGAG 60.093 50.000 0.00 0.00 0.00 4.04
5930 8531 1.136147 CTTCTCGCCATTGCAGCAC 59.864 57.895 0.00 0.00 37.32 4.40
5962 8563 1.165907 CCACCGTTCTTTCAGCAGCA 61.166 55.000 0.00 0.00 0.00 4.41
5965 8566 0.795085 CCGTTCTTTCAGCAGCAGAG 59.205 55.000 0.00 0.00 0.00 3.35
6050 8651 1.736681 GCAATCTCAAGGCAGTCTGAC 59.263 52.381 3.32 0.00 0.00 3.51
6070 8671 3.220110 ACGATGTATCCGGTATGTCACT 58.780 45.455 0.00 0.00 0.00 3.41
6072 8673 3.366070 CGATGTATCCGGTATGTCACTCC 60.366 52.174 0.00 0.00 0.00 3.85
6084 8685 3.924114 TGTCACTCCCAGTTTTCAGAA 57.076 42.857 0.00 0.00 0.00 3.02
6086 8687 2.544267 GTCACTCCCAGTTTTCAGAACG 59.456 50.000 0.00 0.00 0.00 3.95
6146 8748 9.122779 TCATGTTATTCATATGTCAAATCAGCA 57.877 29.630 1.90 0.00 34.67 4.41
6156 8758 8.618677 CATATGTCAAATCAGCAACTATGTTCT 58.381 33.333 0.00 0.00 0.00 3.01
6157 8759 9.836864 ATATGTCAAATCAGCAACTATGTTCTA 57.163 29.630 0.00 0.00 0.00 2.10
6163 8765 9.713740 CAAATCAGCAACTATGTTCTAATCTTC 57.286 33.333 0.00 0.00 0.00 2.87
6192 8794 8.998377 TGATCGAACTTTGAAATAAACTCATGA 58.002 29.630 0.00 0.00 0.00 3.07
6196 8798 8.895845 CGAACTTTGAAATAAACTCATGACTTG 58.104 33.333 0.00 0.00 0.00 3.16
6205 8807 1.277273 ACTCATGACTTGCTGCTGCTA 59.723 47.619 17.00 8.35 40.48 3.49
6206 8808 2.093075 ACTCATGACTTGCTGCTGCTAT 60.093 45.455 17.00 1.91 40.48 2.97
6207 8809 2.285977 TCATGACTTGCTGCTGCTATG 58.714 47.619 17.00 12.26 40.48 2.23
6208 8810 2.014857 CATGACTTGCTGCTGCTATGT 58.985 47.619 17.00 11.86 40.48 2.29
6209 8811 2.189594 TGACTTGCTGCTGCTATGTT 57.810 45.000 17.00 0.00 40.48 2.71
6210 8812 1.808343 TGACTTGCTGCTGCTATGTTG 59.192 47.619 17.00 0.16 40.48 3.33
6211 8813 0.524862 ACTTGCTGCTGCTATGTTGC 59.475 50.000 17.00 0.00 40.48 4.17
6212 8814 0.179145 CTTGCTGCTGCTATGTTGCC 60.179 55.000 17.00 0.00 40.48 4.52
6213 8815 0.894642 TTGCTGCTGCTATGTTGCCA 60.895 50.000 17.00 0.00 40.48 4.92
6214 8816 0.681887 TGCTGCTGCTATGTTGCCAT 60.682 50.000 17.00 0.00 40.48 4.40
6215 8817 1.311859 GCTGCTGCTATGTTGCCATA 58.688 50.000 8.53 0.00 36.03 2.74
6216 8818 1.884579 GCTGCTGCTATGTTGCCATAT 59.115 47.619 8.53 0.00 33.18 1.78
6217 8819 2.295349 GCTGCTGCTATGTTGCCATATT 59.705 45.455 8.53 0.00 33.18 1.28
6218 8820 3.611057 GCTGCTGCTATGTTGCCATATTC 60.611 47.826 8.53 0.00 33.18 1.75
6219 8821 3.819337 CTGCTGCTATGTTGCCATATTCT 59.181 43.478 0.00 0.00 33.18 2.40
6220 8822 4.209538 TGCTGCTATGTTGCCATATTCTT 58.790 39.130 0.00 0.00 33.18 2.52
6221 8823 4.646040 TGCTGCTATGTTGCCATATTCTTT 59.354 37.500 0.00 0.00 33.18 2.52
6222 8824 4.980434 GCTGCTATGTTGCCATATTCTTTG 59.020 41.667 0.00 0.00 33.18 2.77
6223 8825 5.221106 GCTGCTATGTTGCCATATTCTTTGA 60.221 40.000 0.00 0.00 33.18 2.69
6224 8826 6.516194 GCTGCTATGTTGCCATATTCTTTGAT 60.516 38.462 0.00 0.00 33.18 2.57
6236 8838 7.412237 GCCATATTCTTTGATCAAACTTTGCAC 60.412 37.037 16.91 0.71 0.00 4.57
6237 8839 7.063780 CCATATTCTTTGATCAAACTTTGCACC 59.936 37.037 16.91 0.00 0.00 5.01
6265 8867 2.019249 TGCCTTTCTGCTGACATATGC 58.981 47.619 1.58 0.00 0.00 3.14
6296 8898 4.588951 TCACAACCAACTCAGACAGTATCT 59.411 41.667 0.00 0.00 38.66 1.98
6390 8992 1.612156 CTCGAACTGACTCGCTGAAG 58.388 55.000 0.00 0.00 38.73 3.02
6401 9003 2.158957 ACTCGCTGAAGTGAAAACTCCA 60.159 45.455 0.00 0.00 33.75 3.86
6460 9062 1.270625 TGGTTCGCAAAGGAGTACCAG 60.271 52.381 0.00 0.00 38.86 4.00
6551 9154 4.970662 TCCTATTTCTGCACTGCATTTC 57.029 40.909 3.64 0.00 38.13 2.17
6583 9186 3.364964 CCCATTGTACTGCGAAACTGAAC 60.365 47.826 0.00 0.00 0.00 3.18
6624 9227 0.529992 CGCCAGAATAAGTCCCGGAC 60.530 60.000 9.81 9.81 0.00 4.79
6658 9261 5.178067 GCTAGTAGTCGTCTTCTCTATGTCC 59.822 48.000 0.00 0.00 0.00 4.02
6714 9325 6.513556 CGACACTCGATTGTTACAGGATAGAT 60.514 42.308 9.99 0.00 43.74 1.98
6745 9357 3.759581 TCGTAGGACTGGTGAAACTACT 58.240 45.455 0.00 0.00 36.74 2.57
6798 9441 5.122239 TGCATAGTTTGTCTTGCATACTGTC 59.878 40.000 0.00 0.00 39.23 3.51
6851 9494 6.377146 GTGGGAAATGGTTACATCATACTGTT 59.623 38.462 0.00 0.00 35.94 3.16
6878 9521 3.498481 CCAACCCCATATACCCATCACAG 60.498 52.174 0.00 0.00 0.00 3.66
6923 9566 4.165779 AGACAACAACGTTTTCAGCTTTG 58.834 39.130 0.00 0.00 0.00 2.77
6928 9571 3.181500 ACAACGTTTTCAGCTTTGAGGAC 60.181 43.478 0.00 0.00 0.00 3.85
7054 9697 0.809241 CGCTCTCATGTCCTTGCCTC 60.809 60.000 0.00 0.00 0.00 4.70
7100 9743 4.101448 CCTTGCCACCTCCTCCCG 62.101 72.222 0.00 0.00 0.00 5.14
7104 9747 4.785453 GCCACCTCCTCCCGCTTG 62.785 72.222 0.00 0.00 0.00 4.01
7107 9750 2.203788 ACCTCCTCCCGCTTGACA 60.204 61.111 0.00 0.00 0.00 3.58
7318 9961 1.745264 CTCAGGAAGATCCCTCGGC 59.255 63.158 0.00 0.00 37.19 5.54
7338 9981 0.388134 CCTTCGTCTCGGCGAGAAAA 60.388 55.000 38.03 30.54 40.59 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.121948 TCCACCTGAGAGCTTATGCAT 58.878 47.619 3.79 3.79 42.74 3.96
41 43 9.257651 GGGTAAAATATCCGATTAATAGGATCG 57.742 37.037 27.43 10.40 45.32 3.69
58 60 5.475909 TGTATGTTGGTTTGCGGGTAAAATA 59.524 36.000 0.00 0.00 0.00 1.40
64 66 1.611491 CTTGTATGTTGGTTTGCGGGT 59.389 47.619 0.00 0.00 0.00 5.28
68 70 4.766404 ACTAGCTTGTATGTTGGTTTGC 57.234 40.909 0.00 0.00 0.00 3.68
84 86 3.828875 AATTCCTGCTCCTGTACTAGC 57.171 47.619 8.06 8.06 39.25 3.42
85 87 6.640518 TGTAAAATTCCTGCTCCTGTACTAG 58.359 40.000 0.00 0.00 0.00 2.57
91 96 6.825721 AGACTAATGTAAAATTCCTGCTCCTG 59.174 38.462 0.00 0.00 0.00 3.86
94 99 9.601217 TCTAAGACTAATGTAAAATTCCTGCTC 57.399 33.333 0.00 0.00 0.00 4.26
112 119 1.000955 CACGGTGGCTGTTCTAAGACT 59.999 52.381 0.00 0.00 0.00 3.24
121 128 3.249189 ATGACCCACGGTGGCTGT 61.249 61.111 21.88 14.81 35.25 4.40
129 136 2.113860 ACCTTTGATGATGACCCACG 57.886 50.000 0.00 0.00 0.00 4.94
134 141 1.133025 CGGCCAACCTTTGATGATGAC 59.867 52.381 2.24 0.00 0.00 3.06
135 142 1.004161 TCGGCCAACCTTTGATGATGA 59.996 47.619 2.24 0.00 0.00 2.92
136 143 1.402968 CTCGGCCAACCTTTGATGATG 59.597 52.381 2.24 0.00 0.00 3.07
137 144 1.281867 TCTCGGCCAACCTTTGATGAT 59.718 47.619 2.24 0.00 0.00 2.45
138 145 0.690192 TCTCGGCCAACCTTTGATGA 59.310 50.000 2.24 0.00 0.00 2.92
139 146 1.089920 CTCTCGGCCAACCTTTGATG 58.910 55.000 2.24 0.00 0.00 3.07
186 193 3.199891 GCCGTGGACGCCATTACC 61.200 66.667 1.90 0.00 35.28 2.85
325 336 0.318441 TGGTCGTTTCTCTCTGGCAG 59.682 55.000 8.58 8.58 0.00 4.85
326 337 0.033504 GTGGTCGTTTCTCTCTGGCA 59.966 55.000 0.00 0.00 0.00 4.92
330 341 1.258676 GGAGGTGGTCGTTTCTCTCT 58.741 55.000 0.00 0.00 0.00 3.10
362 373 3.450507 TCGTTGGCGACTCTTCCA 58.549 55.556 2.89 0.00 42.81 3.53
392 403 1.784593 TCGTGGATATCACTAGGGGGA 59.215 52.381 4.83 0.00 43.94 4.81
424 435 1.021202 TTGTGTGGAAAGAGCAACCG 58.979 50.000 0.00 0.00 0.00 4.44
478 492 2.296752 TGTACCGGTCGTCATTTCTTGA 59.703 45.455 12.40 0.00 0.00 3.02
482 496 0.986992 CGTGTACCGGTCGTCATTTC 59.013 55.000 12.40 0.00 0.00 2.17
522 536 6.032094 CGGTGATGTATACGGAATATGTACC 58.968 44.000 0.00 0.00 0.00 3.34
579 593 1.373497 CTCGCTAGCGCTAATGGGG 60.373 63.158 31.82 14.87 39.59 4.96
591 605 4.124351 CCAACGCCGACCTCGCTA 62.124 66.667 0.00 0.00 38.18 4.26
595 609 2.741211 GGAACCAACGCCGACCTC 60.741 66.667 0.00 0.00 0.00 3.85
800 854 2.451167 CGTCTGCTGCTGCTGCTAC 61.451 63.158 27.67 23.15 40.48 3.58
801 855 2.125793 CGTCTGCTGCTGCTGCTA 60.126 61.111 27.67 15.74 40.48 3.49
802 856 4.311445 ACGTCTGCTGCTGCTGCT 62.311 61.111 27.67 8.50 40.48 4.24
803 857 4.086178 CACGTCTGCTGCTGCTGC 62.086 66.667 22.51 22.51 40.48 5.25
804 858 4.086178 GCACGTCTGCTGCTGCTG 62.086 66.667 17.00 15.94 40.63 4.41
829 883 1.444553 GCCGGTCGATCGATCCATC 60.445 63.158 21.90 6.52 0.00 3.51
830 884 2.651361 GCCGGTCGATCGATCCAT 59.349 61.111 21.90 0.00 0.00 3.41
895 991 2.440599 CCACCTTCCCCCACTTGG 59.559 66.667 0.00 0.00 0.00 3.61
896 992 2.283173 GCCACCTTCCCCCACTTG 60.283 66.667 0.00 0.00 0.00 3.16
918 1014 2.916702 ATCATCATCGTAGCAAGCCA 57.083 45.000 0.00 0.00 0.00 4.75
919 1015 2.663602 CGTATCATCATCGTAGCAAGCC 59.336 50.000 0.00 0.00 0.00 4.35
966 1066 9.840427 GTTCAAATCCAATTCTTTTTCTCGATA 57.160 29.630 0.00 0.00 0.00 2.92
996 1096 4.158394 CCCTCCTGTTTGTATTCCATTGTG 59.842 45.833 0.00 0.00 0.00 3.33
997 1097 4.044065 TCCCTCCTGTTTGTATTCCATTGT 59.956 41.667 0.00 0.00 0.00 2.71
998 1098 4.599041 TCCCTCCTGTTTGTATTCCATTG 58.401 43.478 0.00 0.00 0.00 2.82
999 1099 4.325344 CCTCCCTCCTGTTTGTATTCCATT 60.325 45.833 0.00 0.00 0.00 3.16
1011 1111 4.361971 TCGACGCCTCCCTCCTGT 62.362 66.667 0.00 0.00 0.00 4.00
1015 1115 4.816984 TCCCTCGACGCCTCCCTC 62.817 72.222 0.00 0.00 0.00 4.30
1016 1116 4.144727 ATCCCTCGACGCCTCCCT 62.145 66.667 0.00 0.00 0.00 4.20
1017 1117 3.607661 GATCCCTCGACGCCTCCC 61.608 72.222 0.00 0.00 0.00 4.30
1071 1172 0.107312 GGATGACAGCTGCATGACCT 60.107 55.000 22.74 5.01 0.00 3.85
1130 1231 2.024273 TGTCTACAACTAGGAGAGGGGG 60.024 54.545 0.00 0.00 0.00 5.40
1134 1235 9.733556 ATATCTGTATGTCTACAACTAGGAGAG 57.266 37.037 0.00 0.00 37.41 3.20
1135 1236 9.727859 GATATCTGTATGTCTACAACTAGGAGA 57.272 37.037 0.00 0.00 37.41 3.71
1137 1238 8.155510 ACGATATCTGTATGTCTACAACTAGGA 58.844 37.037 0.34 0.00 37.41 2.94
1138 1239 8.325421 ACGATATCTGTATGTCTACAACTAGG 57.675 38.462 0.34 0.00 37.41 3.02
1141 1242 8.136165 GGAAACGATATCTGTATGTCTACAACT 58.864 37.037 0.34 0.00 37.41 3.16
1142 1243 8.136165 AGGAAACGATATCTGTATGTCTACAAC 58.864 37.037 0.34 0.00 37.41 3.32
1144 1245 7.040617 GGAGGAAACGATATCTGTATGTCTACA 60.041 40.741 0.34 0.00 36.44 2.74
1145 1246 7.306953 GGAGGAAACGATATCTGTATGTCTAC 58.693 42.308 0.34 0.00 0.00 2.59
1146 1247 6.433404 GGGAGGAAACGATATCTGTATGTCTA 59.567 42.308 0.34 0.00 0.00 2.59
1147 1248 5.244178 GGGAGGAAACGATATCTGTATGTCT 59.756 44.000 0.34 0.00 0.00 3.41
1148 1249 5.471257 GGGAGGAAACGATATCTGTATGTC 58.529 45.833 0.34 0.87 0.00 3.06
1149 1250 4.283722 GGGGAGGAAACGATATCTGTATGT 59.716 45.833 0.34 0.00 0.00 2.29
1152 1253 3.236896 GGGGGAGGAAACGATATCTGTA 58.763 50.000 0.34 0.00 0.00 2.74
1153 1254 2.047830 GGGGGAGGAAACGATATCTGT 58.952 52.381 0.34 0.00 0.00 3.41
1154 1255 1.000955 CGGGGGAGGAAACGATATCTG 59.999 57.143 0.34 0.00 0.00 2.90
1155 1256 1.339097 CGGGGGAGGAAACGATATCT 58.661 55.000 0.34 0.00 0.00 1.98
1157 1258 1.046204 GACGGGGGAGGAAACGATAT 58.954 55.000 0.00 0.00 0.00 1.63
1158 1259 0.032813 AGACGGGGGAGGAAACGATA 60.033 55.000 0.00 0.00 0.00 2.92
1161 1262 2.577593 GAGACGGGGGAGGAAACG 59.422 66.667 0.00 0.00 0.00 3.60
1162 1263 2.223200 GACGAGACGGGGGAGGAAAC 62.223 65.000 0.00 0.00 0.00 2.78
1163 1264 1.980772 GACGAGACGGGGGAGGAAA 60.981 63.158 0.00 0.00 0.00 3.13
1165 1266 3.336568 AGACGAGACGGGGGAGGA 61.337 66.667 0.00 0.00 0.00 3.71
1167 1268 1.378124 GAAGAGACGAGACGGGGGAG 61.378 65.000 0.00 0.00 0.00 4.30
1173 1274 1.803943 CCTGGGAAGAGACGAGACG 59.196 63.158 0.00 0.00 0.00 4.18
1174 1275 1.251527 TGCCTGGGAAGAGACGAGAC 61.252 60.000 0.00 0.00 0.00 3.36
1175 1276 0.967887 CTGCCTGGGAAGAGACGAGA 60.968 60.000 0.00 0.00 0.00 4.04
1177 1278 1.076727 TCTGCCTGGGAAGAGACGA 59.923 57.895 0.00 0.00 0.00 4.20
1179 1280 0.823460 CTCTCTGCCTGGGAAGAGAC 59.177 60.000 20.35 0.00 46.86 3.36
1188 1289 2.433994 GCCCTCCTCTCTCTGCCTG 61.434 68.421 0.00 0.00 0.00 4.85
1194 1295 3.223589 GCCTCGCCCTCCTCTCTC 61.224 72.222 0.00 0.00 0.00 3.20
1200 1301 3.090219 ATAACACGCCTCGCCCTCC 62.090 63.158 0.00 0.00 0.00 4.30
1201 1302 1.883084 CATAACACGCCTCGCCCTC 60.883 63.158 0.00 0.00 0.00 4.30
1202 1303 2.186903 CATAACACGCCTCGCCCT 59.813 61.111 0.00 0.00 0.00 5.19
1204 1305 1.429148 CTTCCATAACACGCCTCGCC 61.429 60.000 0.00 0.00 0.00 5.54
1205 1306 2.006772 CTTCCATAACACGCCTCGC 58.993 57.895 0.00 0.00 0.00 5.03
1206 1307 1.752501 CGCTTCCATAACACGCCTCG 61.753 60.000 0.00 0.00 0.00 4.63
1207 1308 2.006772 CGCTTCCATAACACGCCTC 58.993 57.895 0.00 0.00 0.00 4.70
1208 1309 2.106683 GCGCTTCCATAACACGCCT 61.107 57.895 0.00 0.00 43.58 5.52
1209 1310 2.403586 GCGCTTCCATAACACGCC 59.596 61.111 0.00 0.00 43.58 5.68
1211 1312 1.290203 AGATGCGCTTCCATAACACG 58.710 50.000 18.70 0.00 0.00 4.49
1212 1313 3.487544 GGAAAGATGCGCTTCCATAACAC 60.488 47.826 18.40 5.76 35.24 3.32
1213 1314 2.682856 GGAAAGATGCGCTTCCATAACA 59.317 45.455 18.40 0.00 35.24 2.41
1224 1325 1.815421 CTCGGGGTGGAAAGATGCG 60.815 63.158 0.00 0.00 0.00 4.73
1228 1329 2.602267 TCGCTCGGGGTGGAAAGA 60.602 61.111 0.00 0.00 0.00 2.52
1239 1340 1.304254 TTGATCTCTCCTCTCGCTCG 58.696 55.000 0.00 0.00 0.00 5.03
1242 1343 3.574614 GCTAATTGATCTCTCCTCTCGC 58.425 50.000 0.00 0.00 0.00 5.03
1247 1348 1.974236 CCCCGCTAATTGATCTCTCCT 59.026 52.381 0.00 0.00 0.00 3.69
1249 1350 2.365617 TGTCCCCGCTAATTGATCTCTC 59.634 50.000 0.00 0.00 0.00 3.20
1250 1351 2.366916 CTGTCCCCGCTAATTGATCTCT 59.633 50.000 0.00 0.00 0.00 3.10
1251 1352 2.548920 CCTGTCCCCGCTAATTGATCTC 60.549 54.545 0.00 0.00 0.00 2.75
1253 1354 1.884235 CCTGTCCCCGCTAATTGATC 58.116 55.000 0.00 0.00 0.00 2.92
1254 1355 0.179018 GCCTGTCCCCGCTAATTGAT 60.179 55.000 0.00 0.00 0.00 2.57
1255 1356 1.223487 GCCTGTCCCCGCTAATTGA 59.777 57.895 0.00 0.00 0.00 2.57
1256 1357 2.180204 CGCCTGTCCCCGCTAATTG 61.180 63.158 0.00 0.00 0.00 2.32
1258 1359 3.861797 CCGCCTGTCCCCGCTAAT 61.862 66.667 0.00 0.00 0.00 1.73
1273 1374 4.742201 CACAGACACCTCCCGCCG 62.742 72.222 0.00 0.00 0.00 6.46
1275 1376 3.825160 TTGCACAGACACCTCCCGC 62.825 63.158 0.00 0.00 0.00 6.13
1327 1428 2.597217 CAGTGCTTTTGGCCGGGA 60.597 61.111 2.18 0.00 40.92 5.14
1347 1448 2.584143 CCCGATTGGTACGCGGTC 60.584 66.667 12.47 2.10 43.35 4.79
1376 1486 2.950874 GCTGAGCTACCCTGGACTCTTA 60.951 54.545 0.00 0.00 0.00 2.10
1377 1487 1.859302 CTGAGCTACCCTGGACTCTT 58.141 55.000 0.00 0.00 0.00 2.85
1402 1512 3.175109 ACCGGGATGAAACGAACTATC 57.825 47.619 6.32 0.00 0.00 2.08
1403 1513 3.622166 AACCGGGATGAAACGAACTAT 57.378 42.857 6.32 0.00 0.00 2.12
1405 1515 2.265589 AAACCGGGATGAAACGAACT 57.734 45.000 6.32 0.00 0.00 3.01
1406 1516 3.499537 AGTAAAACCGGGATGAAACGAAC 59.500 43.478 6.32 0.00 0.00 3.95
1407 1517 3.742385 AGTAAAACCGGGATGAAACGAA 58.258 40.909 6.32 0.00 0.00 3.85
1408 1518 3.405823 AGTAAAACCGGGATGAAACGA 57.594 42.857 6.32 0.00 0.00 3.85
1409 1519 3.365565 CCAAGTAAAACCGGGATGAAACG 60.366 47.826 6.32 0.00 0.00 3.60
1410 1520 3.613193 GCCAAGTAAAACCGGGATGAAAC 60.613 47.826 6.32 0.00 0.00 2.78
1411 1521 2.559231 GCCAAGTAAAACCGGGATGAAA 59.441 45.455 6.32 0.00 0.00 2.69
1414 1524 0.450184 CGCCAAGTAAAACCGGGATG 59.550 55.000 6.32 0.00 0.00 3.51
1415 1525 0.325602 TCGCCAAGTAAAACCGGGAT 59.674 50.000 6.32 0.00 0.00 3.85
1416 1526 0.603439 GTCGCCAAGTAAAACCGGGA 60.603 55.000 6.32 0.00 0.00 5.14
1417 1527 0.604511 AGTCGCCAAGTAAAACCGGG 60.605 55.000 6.32 0.00 0.00 5.73
1418 1528 0.794473 GAGTCGCCAAGTAAAACCGG 59.206 55.000 0.00 0.00 0.00 5.28
1420 1530 1.162698 GGGAGTCGCCAAGTAAAACC 58.837 55.000 0.00 0.00 38.95 3.27
1421 1531 1.162698 GGGGAGTCGCCAAGTAAAAC 58.837 55.000 20.82 0.00 38.95 2.43
1422 1532 1.002773 GAGGGGAGTCGCCAAGTAAAA 59.997 52.381 26.56 0.00 39.05 1.52
1423 1533 0.611714 GAGGGGAGTCGCCAAGTAAA 59.388 55.000 26.56 0.00 39.05 2.01
1424 1534 1.601419 CGAGGGGAGTCGCCAAGTAA 61.601 60.000 26.56 0.00 39.05 2.24
1425 1535 2.050350 CGAGGGGAGTCGCCAAGTA 61.050 63.158 26.56 0.00 39.05 2.24
1427 1537 3.068691 TCGAGGGGAGTCGCCAAG 61.069 66.667 26.56 19.08 39.90 3.61
1428 1538 3.068691 CTCGAGGGGAGTCGCCAA 61.069 66.667 26.56 11.56 39.90 4.52
1430 1540 3.519930 GTCTCGAGGGGAGTCGCC 61.520 72.222 18.33 18.33 43.60 5.54
1431 1541 3.519930 GGTCTCGAGGGGAGTCGC 61.520 72.222 13.56 0.00 43.60 5.19
1432 1542 2.829458 GGGTCTCGAGGGGAGTCG 60.829 72.222 13.56 0.00 43.60 4.18
1434 1544 1.157751 TTTGGGTCTCGAGGGGAGT 59.842 57.895 13.56 0.00 43.60 3.85
1435 1545 1.192146 TGTTTGGGTCTCGAGGGGAG 61.192 60.000 13.56 0.00 44.58 4.30
1436 1546 1.152204 TGTTTGGGTCTCGAGGGGA 60.152 57.895 13.56 0.00 0.00 4.81
1438 1548 1.376037 GCTGTTTGGGTCTCGAGGG 60.376 63.158 13.56 0.00 0.00 4.30
1441 1551 0.250295 CCTTGCTGTTTGGGTCTCGA 60.250 55.000 0.00 0.00 0.00 4.04
1443 1553 1.527433 GGCCTTGCTGTTTGGGTCTC 61.527 60.000 0.00 0.00 0.00 3.36
1457 1567 4.806339 CCTCCTCCTCCCGGCCTT 62.806 72.222 0.00 0.00 0.00 4.35
1461 1571 3.430497 TCCTCCTCCTCCTCCCGG 61.430 72.222 0.00 0.00 0.00 5.73
1462 1572 2.123640 GTCCTCCTCCTCCTCCCG 60.124 72.222 0.00 0.00 0.00 5.14
1464 1574 0.753848 CGAAGTCCTCCTCCTCCTCC 60.754 65.000 0.00 0.00 0.00 4.30
1466 1576 1.380650 GCGAAGTCCTCCTCCTCCT 60.381 63.158 0.00 0.00 0.00 3.69
1497 1607 1.805945 CTCTAGGACGCAACCACGC 60.806 63.158 0.00 0.00 36.19 5.34
1500 1610 1.103803 CTAGCTCTAGGACGCAACCA 58.896 55.000 0.00 0.00 0.00 3.67
1517 1628 0.385751 CGCCGCCATCTCTTCTTCTA 59.614 55.000 0.00 0.00 0.00 2.10
1662 1778 1.287815 CACCTTGGTCAGCGTCGTA 59.712 57.895 0.00 0.00 0.00 3.43
1782 1898 4.109675 CCCTTGGATCGGCCGGTT 62.110 66.667 27.83 13.92 40.66 4.44
1834 1950 4.507916 CGGCGAGAGGGAGGGAGA 62.508 72.222 0.00 0.00 0.00 3.71
1835 1951 2.413211 TATCGGCGAGAGGGAGGGAG 62.413 65.000 17.22 0.00 0.00 4.30
1879 1995 3.255379 GCCCGATGAGAACGACGC 61.255 66.667 0.00 0.00 0.00 5.19
2099 2220 1.224592 CAAACGATGGGAGAGGGGG 59.775 63.158 0.00 0.00 0.00 5.40
2100 2221 1.452108 GCAAACGATGGGAGAGGGG 60.452 63.158 0.00 0.00 0.00 4.79
2104 2225 1.447838 GCGAGCAAACGATGGGAGA 60.448 57.895 0.00 0.00 35.09 3.71
2106 2227 2.813474 CGCGAGCAAACGATGGGA 60.813 61.111 0.00 0.00 35.09 4.37
2146 2267 2.280389 CCCGCTGATCATGTCCCG 60.280 66.667 0.00 0.00 0.00 5.14
2213 2334 2.666317 GAGGAGGAGAAGGAGAAGGAG 58.334 57.143 0.00 0.00 0.00 3.69
2315 2445 3.653344 GCCCCAGTCTTTTAAAGCTTTG 58.347 45.455 22.02 4.92 0.00 2.77
2350 2480 1.444553 CCAAGTCGTCGTCCTGCTC 60.445 63.158 0.00 0.00 0.00 4.26
2405 2535 1.668793 TGTGCATGTCTGACAGCCG 60.669 57.895 16.46 8.25 0.00 5.52
2448 2579 4.722700 CGACCCAACCCAGCCCAG 62.723 72.222 0.00 0.00 0.00 4.45
2527 2658 4.495349 CGGAGTGGTAACTGATACGTAGTG 60.495 50.000 0.08 0.00 38.03 2.74
2533 2709 1.202498 GGCCGGAGTGGTAACTGATAC 60.202 57.143 5.05 0.00 41.21 2.24
2599 2775 9.472361 CAAGACTGAAAACTGAAAATCAATCAT 57.528 29.630 0.00 0.00 0.00 2.45
2652 2833 6.477688 CCATGAAATTGGCATATGTTTGACTC 59.522 38.462 4.29 0.00 0.00 3.36
2684 2871 7.013274 ACGGGTTTCTATATCAATGTTTCCATG 59.987 37.037 0.00 0.00 0.00 3.66
2742 2929 1.517694 CCGTCCGTCATAACCACCG 60.518 63.158 0.00 0.00 0.00 4.94
2848 3050 3.202001 CTAACATGCACCGCCCCG 61.202 66.667 0.00 0.00 0.00 5.73
2910 3112 2.829043 TTCCGATGCCGTCTTGACCG 62.829 60.000 0.00 0.00 0.00 4.79
2980 3190 1.899814 GACATGACACCCACCAGACTA 59.100 52.381 0.00 0.00 0.00 2.59
2984 3194 1.238439 GTTGACATGACACCCACCAG 58.762 55.000 0.00 0.00 0.00 4.00
2991 3201 0.602638 TGGGCTCGTTGACATGACAC 60.603 55.000 0.00 0.00 0.00 3.67
2997 3207 3.636231 CCCCTGGGCTCGTTGACA 61.636 66.667 7.39 0.00 0.00 3.58
2998 3208 2.198304 ATTCCCCTGGGCTCGTTGAC 62.198 60.000 7.39 0.00 34.68 3.18
2999 3209 0.619255 TATTCCCCTGGGCTCGTTGA 60.619 55.000 7.39 0.00 34.68 3.18
3000 3210 0.474184 ATATTCCCCTGGGCTCGTTG 59.526 55.000 7.39 0.00 34.68 4.10
3001 3211 2.112279 TATATTCCCCTGGGCTCGTT 57.888 50.000 7.39 0.00 34.68 3.85
3002 3212 2.344093 ATATATTCCCCTGGGCTCGT 57.656 50.000 7.39 0.00 34.68 4.18
3004 3214 8.402683 TCTATCTATATATATTCCCCTGGGCTC 58.597 40.741 7.39 0.00 34.68 4.70
3005 3215 8.320278 TCTATCTATATATATTCCCCTGGGCT 57.680 38.462 7.39 0.00 34.68 5.19
3007 3217 8.986991 GCATCTATCTATATATATTCCCCTGGG 58.013 40.741 5.50 5.50 0.00 4.45
3008 3218 9.781425 AGCATCTATCTATATATATTCCCCTGG 57.219 37.037 0.00 0.00 0.00 4.45
3010 3220 9.265862 GCAGCATCTATCTATATATATTCCCCT 57.734 37.037 0.00 0.00 0.00 4.79
3011 3221 9.040259 TGCAGCATCTATCTATATATATTCCCC 57.960 37.037 0.00 0.00 0.00 4.81
3057 3267 2.116736 TTCAAGCAAACGCAGCGAGG 62.117 55.000 24.65 11.23 37.01 4.63
3095 3305 7.279981 CCGAATCAATAAAGTAACACCAGATGA 59.720 37.037 0.00 0.00 0.00 2.92
3096 3306 7.409697 CCGAATCAATAAAGTAACACCAGATG 58.590 38.462 0.00 0.00 0.00 2.90
3128 3338 1.139163 CATTTGGAAAAGCACCACGC 58.861 50.000 0.00 0.00 42.91 5.34
3130 3340 4.996062 CAATCATTTGGAAAAGCACCAC 57.004 40.909 0.00 0.00 37.13 4.16
3170 3381 7.122650 TGAAAGAAAAGAAAGAGAAAGCTCCAA 59.877 33.333 0.00 0.00 42.30 3.53
3173 3384 8.348507 TCATGAAAGAAAAGAAAGAGAAAGCTC 58.651 33.333 0.00 0.00 41.62 4.09
3356 3593 3.735746 GGGTTTCTTTATATGCGCATTGC 59.264 43.478 30.42 8.01 46.70 3.56
3362 3601 3.283751 TGTGGGGGTTTCTTTATATGCG 58.716 45.455 0.00 0.00 0.00 4.73
3364 3603 5.359860 GGAACTGTGGGGGTTTCTTTATATG 59.640 44.000 0.00 0.00 0.00 1.78
3403 3642 9.837525 CAAATACAAGAATCTTCTCAAAGGAAG 57.162 33.333 0.00 0.00 42.72 3.46
3441 3681 5.324409 TCCTCTGTCTGCATTTTTACCAAT 58.676 37.500 0.00 0.00 0.00 3.16
3442 3682 4.724399 TCCTCTGTCTGCATTTTTACCAA 58.276 39.130 0.00 0.00 0.00 3.67
3443 3683 4.365514 TCCTCTGTCTGCATTTTTACCA 57.634 40.909 0.00 0.00 0.00 3.25
3444 3684 4.518970 TGTTCCTCTGTCTGCATTTTTACC 59.481 41.667 0.00 0.00 0.00 2.85
3445 3685 5.008613 TGTGTTCCTCTGTCTGCATTTTTAC 59.991 40.000 0.00 0.00 0.00 2.01
3446 3686 5.129634 TGTGTTCCTCTGTCTGCATTTTTA 58.870 37.500 0.00 0.00 0.00 1.52
3447 3687 3.953612 TGTGTTCCTCTGTCTGCATTTTT 59.046 39.130 0.00 0.00 0.00 1.94
3448 3688 3.554934 TGTGTTCCTCTGTCTGCATTTT 58.445 40.909 0.00 0.00 0.00 1.82
3464 3704 1.072331 AGAAAGGACGCCAGATGTGTT 59.928 47.619 0.00 0.00 37.96 3.32
3490 3730 4.516698 GCAGAAACCTTTCAGTCTTCATGA 59.483 41.667 0.00 0.00 39.61 3.07
3491 3731 4.518211 AGCAGAAACCTTTCAGTCTTCATG 59.482 41.667 0.78 0.00 39.61 3.07
3492 3732 4.723309 AGCAGAAACCTTTCAGTCTTCAT 58.277 39.130 0.78 0.00 39.61 2.57
3496 3736 3.558109 GCCTAGCAGAAACCTTTCAGTCT 60.558 47.826 0.78 0.00 39.61 3.24
3500 3744 2.949177 TGCCTAGCAGAAACCTTTCA 57.051 45.000 0.78 0.00 39.61 2.69
3510 3754 3.878778 AGGTTAGTTGATTGCCTAGCAG 58.121 45.455 0.00 0.00 40.61 4.24
3511 3755 4.301072 AAGGTTAGTTGATTGCCTAGCA 57.699 40.909 0.00 0.00 36.47 3.49
3514 3758 5.249780 TCCAAAGGTTAGTTGATTGCCTA 57.750 39.130 0.00 0.00 0.00 3.93
3528 3772 7.657761 CGCTCTTGTATATATCTTTCCAAAGGT 59.342 37.037 0.00 0.00 36.67 3.50
3532 3776 8.304596 CCTACGCTCTTGTATATATCTTTCCAA 58.695 37.037 0.00 0.00 0.00 3.53
3533 3777 7.668469 TCCTACGCTCTTGTATATATCTTTCCA 59.332 37.037 0.00 0.00 0.00 3.53
3541 3785 8.467598 GGATGATTTCCTACGCTCTTGTATATA 58.532 37.037 0.00 0.00 41.78 0.86
3542 3786 7.324178 GGATGATTTCCTACGCTCTTGTATAT 58.676 38.462 0.00 0.00 41.78 0.86
3543 3787 6.569801 CGGATGATTTCCTACGCTCTTGTATA 60.570 42.308 0.00 0.00 42.99 1.47
3549 3793 2.032620 ACGGATGATTTCCTACGCTCT 58.967 47.619 0.00 0.00 42.99 4.09
3565 3809 3.136123 GATGGACGGACGGACGGA 61.136 66.667 6.00 0.00 38.39 4.69
3566 3810 4.203076 GGATGGACGGACGGACGG 62.203 72.222 6.00 0.00 38.39 4.79
3567 3811 2.679132 GATGGATGGACGGACGGACG 62.679 65.000 0.00 0.00 40.31 4.79
3568 3812 1.067582 GATGGATGGACGGACGGAC 59.932 63.158 0.00 0.00 0.00 4.79
3569 3813 2.131709 GGATGGATGGACGGACGGA 61.132 63.158 0.00 0.00 0.00 4.69
3570 3814 1.758440 ATGGATGGATGGACGGACGG 61.758 60.000 0.00 0.00 0.00 4.79
3571 3815 0.601046 CATGGATGGATGGACGGACG 60.601 60.000 0.00 0.00 0.00 4.79
3572 3816 0.886490 GCATGGATGGATGGACGGAC 60.886 60.000 0.00 0.00 0.00 4.79
3573 3817 1.344191 TGCATGGATGGATGGACGGA 61.344 55.000 0.00 0.00 0.00 4.69
3574 3818 0.251033 ATGCATGGATGGATGGACGG 60.251 55.000 0.00 0.00 37.46 4.79
3575 3819 3.334413 ATGCATGGATGGATGGACG 57.666 52.632 0.00 0.00 37.46 4.79
3611 3863 0.328258 GCCCTACCACACAACTCCAT 59.672 55.000 0.00 0.00 0.00 3.41
3612 3864 1.057275 TGCCCTACCACACAACTCCA 61.057 55.000 0.00 0.00 0.00 3.86
3613 3865 0.605589 GTGCCCTACCACACAACTCC 60.606 60.000 0.00 0.00 36.77 3.85
3614 3866 0.107831 TGTGCCCTACCACACAACTC 59.892 55.000 0.00 0.00 43.48 3.01
3615 3867 2.226764 TGTGCCCTACCACACAACT 58.773 52.632 0.00 0.00 43.48 3.16
3616 3868 4.889807 TGTGCCCTACCACACAAC 57.110 55.556 0.00 0.00 43.48 3.32
3623 3875 2.583143 GGAAATACCATGTGCCCTACC 58.417 52.381 0.00 0.00 38.79 3.18
3812 4064 8.796475 AGCAAAATAATTTAGACATGTCACACT 58.204 29.630 27.02 9.48 0.00 3.55
3817 4069 7.962918 ACACGAGCAAAATAATTTAGACATGTC 59.037 33.333 18.47 18.47 0.00 3.06
3835 4145 2.653115 CCTGCAGAGACACGAGCA 59.347 61.111 17.39 0.00 34.48 4.26
3836 4146 2.125753 CCCTGCAGAGACACGAGC 60.126 66.667 17.39 0.00 0.00 5.03
3837 4147 1.510383 CTCCCTGCAGAGACACGAG 59.490 63.158 17.39 5.95 35.82 4.18
3839 4149 2.575993 CCTCCCTGCAGAGACACG 59.424 66.667 17.39 0.00 35.82 4.49
3996 4475 4.399618 ACATACAGTAGACAGTAGGCAGTG 59.600 45.833 0.00 0.00 0.00 3.66
3997 4476 4.601084 ACATACAGTAGACAGTAGGCAGT 58.399 43.478 0.00 0.00 0.00 4.40
3998 4477 6.486993 TGATACATACAGTAGACAGTAGGCAG 59.513 42.308 0.00 0.00 35.85 4.85
3999 4478 6.362248 TGATACATACAGTAGACAGTAGGCA 58.638 40.000 0.00 0.00 35.85 4.75
4000 4479 6.879276 TGATACATACAGTAGACAGTAGGC 57.121 41.667 0.00 0.00 35.85 3.93
4001 4480 8.851145 ACAATGATACATACAGTAGACAGTAGG 58.149 37.037 0.00 0.00 35.85 3.18
4002 4481 9.885934 GACAATGATACATACAGTAGACAGTAG 57.114 37.037 0.00 0.00 35.85 2.57
4024 4524 3.187637 CGATTTTAAAGCGGGACTGACAA 59.812 43.478 7.50 0.00 36.51 3.18
4048 4548 2.410730 GTGTAGTGTACGATGGTGCAAC 59.589 50.000 0.00 0.00 40.54 4.17
4049 4549 2.036089 TGTGTAGTGTACGATGGTGCAA 59.964 45.455 0.00 0.00 40.54 4.08
4054 4554 3.186909 CACCATGTGTAGTGTACGATGG 58.813 50.000 11.03 11.03 42.58 3.51
4124 4624 0.774276 TGGGACATTACCAACAGGCA 59.226 50.000 0.00 0.00 34.44 4.75
4125 4625 1.271926 ACTGGGACATTACCAACAGGC 60.272 52.381 0.00 0.00 38.20 4.85
4133 4633 8.931385 TTATTACTACGAAACTGGGACATTAC 57.069 34.615 0.00 0.00 38.20 1.89
4180 4685 3.030291 ACCAAACCATGCTTTGTCTGAA 58.970 40.909 11.57 0.00 30.33 3.02
4181 4686 2.665165 ACCAAACCATGCTTTGTCTGA 58.335 42.857 11.57 0.00 30.33 3.27
4182 4687 3.569701 ACTACCAAACCATGCTTTGTCTG 59.430 43.478 11.57 4.72 30.33 3.51
4183 4688 3.569701 CACTACCAAACCATGCTTTGTCT 59.430 43.478 11.57 0.96 30.33 3.41
4184 4689 3.568007 TCACTACCAAACCATGCTTTGTC 59.432 43.478 11.57 0.00 30.33 3.18
4208 4728 3.976701 GACATGGGGCCGGTCACAG 62.977 68.421 19.71 11.86 0.00 3.66
4209 4729 4.028490 GACATGGGGCCGGTCACA 62.028 66.667 16.49 16.49 0.00 3.58
4210 4730 3.561120 TTGACATGGGGCCGGTCAC 62.561 63.158 19.70 4.00 40.92 3.67
4211 4731 3.253061 TTGACATGGGGCCGGTCA 61.253 61.111 9.07 17.08 39.60 4.02
4212 4732 2.438434 CTTGACATGGGGCCGGTC 60.438 66.667 1.90 0.00 0.00 4.79
4213 4733 4.047125 CCTTGACATGGGGCCGGT 62.047 66.667 1.90 0.00 0.00 5.28
4214 4734 4.047125 ACCTTGACATGGGGCCGG 62.047 66.667 11.77 0.00 0.00 6.13
4215 4735 2.751436 CACCTTGACATGGGGCCG 60.751 66.667 11.77 0.00 0.00 6.13
4228 4748 1.202758 TCACGAGAAATGCAACCACCT 60.203 47.619 0.00 0.00 0.00 4.00
4229 4749 1.234821 TCACGAGAAATGCAACCACC 58.765 50.000 0.00 0.00 0.00 4.61
4242 4762 2.163010 AGCATTTTTGCTGGATCACGAG 59.837 45.455 0.00 0.00 44.44 4.18
4254 4774 5.902613 TTACCTCAGGATCAGCATTTTTG 57.097 39.130 0.00 0.00 0.00 2.44
4255 4775 7.486407 AATTTACCTCAGGATCAGCATTTTT 57.514 32.000 0.00 0.00 0.00 1.94
4266 4786 7.776030 TCAAACACAAACTAATTTACCTCAGGA 59.224 33.333 0.00 0.00 0.00 3.86
4293 4821 3.863424 GTCTATTGTATCACACCACCGTG 59.137 47.826 0.00 0.00 46.11 4.94
4304 4832 9.339850 TGTCTAGGAGTAGTTGTCTATTGTATC 57.660 37.037 0.00 0.00 0.00 2.24
4332 4860 4.453136 GCTAACGGATCAGTCCTAGTCTAG 59.547 50.000 0.00 0.00 42.73 2.43
4333 4861 4.102838 AGCTAACGGATCAGTCCTAGTCTA 59.897 45.833 0.00 0.00 42.73 2.59
4334 4862 3.117813 AGCTAACGGATCAGTCCTAGTCT 60.118 47.826 0.00 0.00 42.73 3.24
4335 4863 3.003897 CAGCTAACGGATCAGTCCTAGTC 59.996 52.174 0.00 0.00 42.73 2.59
4336 4864 2.952978 CAGCTAACGGATCAGTCCTAGT 59.047 50.000 0.00 0.00 42.73 2.57
4337 4865 3.215151 TCAGCTAACGGATCAGTCCTAG 58.785 50.000 0.00 0.00 42.73 3.02
4338 4866 3.292492 TCAGCTAACGGATCAGTCCTA 57.708 47.619 0.00 0.00 42.73 2.94
4384 4912 0.244721 GAACCACAAAGATGCAGCCC 59.755 55.000 0.00 0.00 0.00 5.19
4387 4915 1.542915 CCCTGAACCACAAAGATGCAG 59.457 52.381 0.00 0.00 0.00 4.41
4393 4921 1.815003 GCATCTCCCTGAACCACAAAG 59.185 52.381 0.00 0.00 0.00 2.77
4406 4934 1.059006 ACCTCAGGATGGGCATCTCC 61.059 60.000 0.00 0.00 32.77 3.71
4409 4937 0.548031 TTCACCTCAGGATGGGCATC 59.452 55.000 0.00 0.00 32.77 3.91
4414 4942 2.816087 CAAACTGTTCACCTCAGGATGG 59.184 50.000 0.00 0.00 37.25 3.51
4426 4957 1.062587 CGCCATCGGATCAAACTGTTC 59.937 52.381 0.00 0.00 0.00 3.18
4443 4974 4.578105 AGTATAGGTGTGTCTACTTACGCC 59.422 45.833 0.00 0.00 45.50 5.68
4445 4976 6.018098 CAGGAGTATAGGTGTGTCTACTTACG 60.018 46.154 0.00 0.00 0.00 3.18
4448 4979 5.044328 TCCAGGAGTATAGGTGTGTCTACTT 60.044 44.000 0.00 0.00 0.00 2.24
4450 4981 4.579753 GTCCAGGAGTATAGGTGTGTCTAC 59.420 50.000 0.00 0.00 0.00 2.59
4451 4982 4.477581 AGTCCAGGAGTATAGGTGTGTCTA 59.522 45.833 0.00 0.00 0.00 2.59
4452 4983 3.269906 AGTCCAGGAGTATAGGTGTGTCT 59.730 47.826 0.00 0.00 0.00 3.41
4454 4985 3.759815 AGTCCAGGAGTATAGGTGTGT 57.240 47.619 0.00 0.00 0.00 3.72
4455 4986 3.564644 CGTAGTCCAGGAGTATAGGTGTG 59.435 52.174 7.32 0.00 0.00 3.82
4456 4987 3.457380 TCGTAGTCCAGGAGTATAGGTGT 59.543 47.826 7.32 0.00 0.00 4.16
4463 4994 0.107508 CCGGTCGTAGTCCAGGAGTA 60.108 60.000 0.00 0.00 34.76 2.59
4464 4995 1.378250 CCGGTCGTAGTCCAGGAGT 60.378 63.158 1.29 1.29 34.76 3.85
4470 5001 0.678048 ACTACCACCGGTCGTAGTCC 60.678 60.000 31.78 0.00 40.92 3.85
4474 5005 0.895100 AGCAACTACCACCGGTCGTA 60.895 55.000 11.76 11.76 37.09 3.43
4499 5079 0.035056 AACTGCCCCATCAGCTACAC 60.035 55.000 0.00 0.00 37.59 2.90
4652 5246 1.065709 GTGCTTCCTTGGTATCCGGAA 60.066 52.381 9.01 0.00 35.63 4.30
4653 5247 0.539986 GTGCTTCCTTGGTATCCGGA 59.460 55.000 6.61 6.61 0.00 5.14
4654 5248 0.810031 CGTGCTTCCTTGGTATCCGG 60.810 60.000 0.00 0.00 0.00 5.14
4717 5330 0.034863 TTTATGAACGGGCCTCCCAC 60.035 55.000 0.84 0.00 45.83 4.61
4862 5483 1.227234 GCAAAGCAAAGCCAACGGT 60.227 52.632 0.00 0.00 0.00 4.83
4873 5494 0.467844 TCTCCCAGCAAAGCAAAGCA 60.468 50.000 0.00 0.00 0.00 3.91
4874 5495 0.243095 CTCTCCCAGCAAAGCAAAGC 59.757 55.000 0.00 0.00 0.00 3.51
4875 5496 1.613836 ACTCTCCCAGCAAAGCAAAG 58.386 50.000 0.00 0.00 0.00 2.77
4916 5549 4.709840 CCAAGTGGCACCAGAGAG 57.290 61.111 15.27 0.00 0.00 3.20
5012 5645 4.515404 GCCAACGGCCTGTACTAG 57.485 61.111 0.00 0.00 44.06 2.57
5021 5654 4.179579 GAATCCTGCGCCAACGGC 62.180 66.667 4.18 0.00 46.75 5.68
5022 5655 3.508840 GGAATCCTGCGCCAACGG 61.509 66.667 4.18 0.00 40.57 4.44
5050 5683 2.494471 TGGTAGTACATGTTCCTGGACG 59.506 50.000 2.30 0.00 34.99 4.79
5062 5695 6.046593 CAGAAACAACTCAAGTGGTAGTACA 58.953 40.000 2.06 0.00 30.60 2.90
5070 5706 2.945008 TCCTGCAGAAACAACTCAAGTG 59.055 45.455 17.39 0.00 0.00 3.16
5101 5737 0.746659 AGAAACCTGGTGCAGTTTGC 59.253 50.000 0.00 0.00 45.29 3.68
5111 5747 4.326826 TGAGTAGAAATGCAGAAACCTGG 58.673 43.478 0.00 0.00 32.40 4.45
5149 5791 6.912591 ACAAAATTGCACTAAAGAGAAACGAG 59.087 34.615 0.00 0.00 0.00 4.18
5152 5794 6.910433 TCGACAAAATTGCACTAAAGAGAAAC 59.090 34.615 0.00 0.00 0.00 2.78
5175 5817 1.447317 AAACACAGCTGGTTGCCTCG 61.447 55.000 19.93 0.00 44.23 4.63
5179 5849 2.222027 AGTCTAAACACAGCTGGTTGC 58.778 47.619 19.93 10.20 43.29 4.17
5213 5883 3.751698 ACTCCTGTTTTCATAACGGAAGC 59.248 43.478 0.00 0.00 0.00 3.86
5217 5887 7.894376 TTTAGTACTCCTGTTTTCATAACGG 57.106 36.000 0.00 0.00 0.00 4.44
5219 5889 8.182227 GGCATTTAGTACTCCTGTTTTCATAAC 58.818 37.037 0.00 0.00 0.00 1.89
5236 5908 4.003648 GCAGAACTGTACTGGCATTTAGT 58.996 43.478 4.66 0.00 36.09 2.24
5241 5913 2.566833 TTGCAGAACTGTACTGGCAT 57.433 45.000 4.66 0.00 36.09 4.40
5242 5914 2.340210 TTTGCAGAACTGTACTGGCA 57.660 45.000 4.66 1.43 36.09 4.92
5271 7779 4.645535 TCAAATGAACACTCCTTCCTCTG 58.354 43.478 0.00 0.00 0.00 3.35
5303 7811 2.351350 CGACAACCATGGCTGTAAAACC 60.351 50.000 20.59 7.25 29.70 3.27
5341 7894 1.927895 CACGAGCCCACTATTGTCTC 58.072 55.000 0.00 0.00 0.00 3.36
5342 7895 0.108138 GCACGAGCCCACTATTGTCT 60.108 55.000 0.00 0.00 33.58 3.41
5345 7898 1.148157 CGAGCACGAGCCCACTATTG 61.148 60.000 0.00 0.00 43.56 1.90
5363 7916 0.035458 GATGGATAGGGGTCAAGCCG 59.965 60.000 0.00 0.00 38.44 5.52
5379 7932 5.645067 TCATCAGTGCCTTGTTAAGAAGATG 59.355 40.000 13.67 8.39 0.00 2.90
5380 7933 5.809001 TCATCAGTGCCTTGTTAAGAAGAT 58.191 37.500 13.67 0.00 0.00 2.40
5385 7938 5.695851 AACTTCATCAGTGCCTTGTTAAG 57.304 39.130 0.00 0.00 35.12 1.85
5389 7942 4.655963 ACATAACTTCATCAGTGCCTTGT 58.344 39.130 0.00 0.00 35.12 3.16
5390 7943 6.741992 TTACATAACTTCATCAGTGCCTTG 57.258 37.500 0.00 0.00 35.12 3.61
5396 7949 8.629158 TGCAAAAGTTTACATAACTTCATCAGT 58.371 29.630 3.63 0.00 39.36 3.41
5484 8037 9.020813 GGAAGTAAAACAAGAGAAATGACAAAC 57.979 33.333 0.00 0.00 0.00 2.93
5506 8059 1.915614 GCAGTCGCATGTGGTGGAAG 61.916 60.000 6.39 0.00 38.36 3.46
5526 8079 7.661437 TGTTCATTAGAGCTGATGTACAAAGTT 59.339 33.333 0.00 0.00 35.25 2.66
5527 8080 7.118390 GTGTTCATTAGAGCTGATGTACAAAGT 59.882 37.037 13.47 0.00 38.10 2.66
5535 8088 3.311871 GCTGGTGTTCATTAGAGCTGATG 59.688 47.826 0.00 0.00 0.00 3.07
5545 8098 1.423541 TGGGTACTGCTGGTGTTCATT 59.576 47.619 0.00 0.00 0.00 2.57
5546 8099 1.064003 TGGGTACTGCTGGTGTTCAT 58.936 50.000 0.00 0.00 0.00 2.57
5547 8100 0.840617 TTGGGTACTGCTGGTGTTCA 59.159 50.000 0.00 0.00 0.00 3.18
5548 8101 1.235724 GTTGGGTACTGCTGGTGTTC 58.764 55.000 0.00 0.00 0.00 3.18
5551 8104 2.779755 TATGTTGGGTACTGCTGGTG 57.220 50.000 0.00 0.00 0.00 4.17
5571 8124 4.026356 AGAATGTGCTACTTGCTCCTTT 57.974 40.909 0.00 0.00 43.37 3.11
5573 8126 3.772025 ACTAGAATGTGCTACTTGCTCCT 59.228 43.478 0.00 0.00 43.37 3.69
5574 8127 3.868077 CACTAGAATGTGCTACTTGCTCC 59.132 47.826 0.00 0.00 43.37 4.70
5575 8128 4.499183 ACACTAGAATGTGCTACTTGCTC 58.501 43.478 0.00 0.00 43.37 4.26
5577 8130 3.619038 GGACACTAGAATGTGCTACTTGC 59.381 47.826 0.00 0.00 41.30 4.01
5578 8131 3.859961 CGGACACTAGAATGTGCTACTTG 59.140 47.826 0.00 0.00 41.30 3.16
5585 8138 2.231478 AGACCACGGACACTAGAATGTG 59.769 50.000 0.00 0.00 43.07 3.21
5587 8140 4.920640 ATAGACCACGGACACTAGAATG 57.079 45.455 0.00 0.00 0.00 2.67
5588 8141 7.598759 AATTATAGACCACGGACACTAGAAT 57.401 36.000 0.00 0.00 31.22 2.40
5589 8142 7.230108 CCTAATTATAGACCACGGACACTAGAA 59.770 40.741 0.00 0.00 0.00 2.10
5590 8143 6.713903 CCTAATTATAGACCACGGACACTAGA 59.286 42.308 0.00 0.00 0.00 2.43
5591 8144 6.713903 TCCTAATTATAGACCACGGACACTAG 59.286 42.308 0.00 0.00 0.00 2.57
5592 8145 6.604171 TCCTAATTATAGACCACGGACACTA 58.396 40.000 0.00 0.00 0.00 2.74
5598 8164 8.671384 TTCAAAATCCTAATTATAGACCACGG 57.329 34.615 0.00 0.00 0.00 4.94
5612 8178 9.691362 GAACATTGCTAGTTTTTCAAAATCCTA 57.309 29.630 0.00 0.00 0.00 2.94
5635 8228 3.003068 CGATCCAAGATCCAATGCTGAAC 59.997 47.826 0.00 0.00 0.00 3.18
5640 8233 1.972872 ACCGATCCAAGATCCAATGC 58.027 50.000 0.00 0.00 0.00 3.56
5646 8239 3.475566 TCCATGAACCGATCCAAGATC 57.524 47.619 0.00 0.00 0.00 2.75
5653 8246 5.335127 CAAAACAGAATCCATGAACCGATC 58.665 41.667 0.00 0.00 0.00 3.69
5654 8247 4.158394 CCAAAACAGAATCCATGAACCGAT 59.842 41.667 0.00 0.00 0.00 4.18
5655 8248 3.505680 CCAAAACAGAATCCATGAACCGA 59.494 43.478 0.00 0.00 0.00 4.69
5656 8249 3.505680 TCCAAAACAGAATCCATGAACCG 59.494 43.478 0.00 0.00 0.00 4.44
5657 8250 5.665916 ATCCAAAACAGAATCCATGAACC 57.334 39.130 0.00 0.00 0.00 3.62
5658 8251 7.830739 ACTAATCCAAAACAGAATCCATGAAC 58.169 34.615 0.00 0.00 0.00 3.18
5659 8252 8.421249 AACTAATCCAAAACAGAATCCATGAA 57.579 30.769 0.00 0.00 0.00 2.57
5660 8253 9.527157 TTAACTAATCCAAAACAGAATCCATGA 57.473 29.630 0.00 0.00 0.00 3.07
5661 8254 9.573133 GTTAACTAATCCAAAACAGAATCCATG 57.427 33.333 0.00 0.00 0.00 3.66
5662 8255 8.749354 GGTTAACTAATCCAAAACAGAATCCAT 58.251 33.333 5.42 0.00 0.00 3.41
5669 8265 7.712797 ACTTGTGGTTAACTAATCCAAAACAG 58.287 34.615 5.42 0.00 32.82 3.16
5670 8266 7.648039 ACTTGTGGTTAACTAATCCAAAACA 57.352 32.000 5.42 0.00 32.82 2.83
5671 8267 9.454585 GTAACTTGTGGTTAACTAATCCAAAAC 57.545 33.333 5.42 0.00 41.41 2.43
5672 8268 9.186837 TGTAACTTGTGGTTAACTAATCCAAAA 57.813 29.630 5.42 0.00 41.41 2.44
5673 8269 8.623030 GTGTAACTTGTGGTTAACTAATCCAAA 58.377 33.333 5.42 0.00 41.41 3.28
5675 8271 7.281098 TGTGTAACTTGTGGTTAACTAATCCA 58.719 34.615 5.42 0.00 41.41 3.41
5677 8273 8.597662 TCTGTGTAACTTGTGGTTAACTAATC 57.402 34.615 5.42 0.00 41.41 1.75
5683 8279 7.051623 AGACATTCTGTGTAACTTGTGGTTAA 58.948 34.615 0.00 0.00 42.36 2.01
5684 8280 6.588204 AGACATTCTGTGTAACTTGTGGTTA 58.412 36.000 0.00 0.00 42.36 2.85
5687 8283 5.408604 GGTAGACATTCTGTGTAACTTGTGG 59.591 44.000 0.00 0.00 42.36 4.17
5695 8291 7.602644 GTCTGATTTTGGTAGACATTCTGTGTA 59.397 37.037 0.00 0.00 42.36 2.90
5708 8304 5.222079 TGTGCTAGTGTCTGATTTTGGTA 57.778 39.130 0.00 0.00 0.00 3.25
5715 8311 5.394663 GGTCTGTATTGTGCTAGTGTCTGAT 60.395 44.000 0.00 0.00 0.00 2.90
5744 8340 2.303022 TCAGTTCCTCGAATGGAAAGCT 59.697 45.455 7.65 0.15 46.34 3.74
5745 8341 2.416893 GTCAGTTCCTCGAATGGAAAGC 59.583 50.000 7.65 0.00 46.34 3.51
5746 8342 3.681897 CAGTCAGTTCCTCGAATGGAAAG 59.318 47.826 7.65 4.70 46.34 2.62
5750 8346 3.257393 CTTCAGTCAGTTCCTCGAATGG 58.743 50.000 0.00 0.00 0.00 3.16
5751 8347 2.670414 GCTTCAGTCAGTTCCTCGAATG 59.330 50.000 0.00 0.00 0.00 2.67
5752 8348 2.300152 TGCTTCAGTCAGTTCCTCGAAT 59.700 45.455 0.00 0.00 0.00 3.34
5753 8349 1.686587 TGCTTCAGTCAGTTCCTCGAA 59.313 47.619 0.00 0.00 0.00 3.71
5754 8350 1.328279 TGCTTCAGTCAGTTCCTCGA 58.672 50.000 0.00 0.00 0.00 4.04
5755 8351 2.154854 TTGCTTCAGTCAGTTCCTCG 57.845 50.000 0.00 0.00 0.00 4.63
5756 8352 3.406764 ACATTGCTTCAGTCAGTTCCTC 58.593 45.455 0.00 0.00 0.00 3.71
5757 8353 3.072184 AGACATTGCTTCAGTCAGTTCCT 59.928 43.478 0.00 0.00 34.80 3.36
5758 8354 3.188048 CAGACATTGCTTCAGTCAGTTCC 59.812 47.826 0.00 0.00 34.80 3.62
5939 8540 1.301401 CTGAAAGAACGGTGGCCGA 60.301 57.895 14.86 0.00 44.18 5.54
5945 8546 0.106708 TCTGCTGCTGAAAGAACGGT 59.893 50.000 6.77 0.00 34.07 4.83
5993 8594 4.034410 GGAGTCTGAAATTAGGAGGGAGT 58.966 47.826 0.00 0.00 0.00 3.85
6050 8651 3.366070 GGAGTGACATACCGGATACATCG 60.366 52.174 9.46 0.00 0.00 3.84
6070 8671 0.181587 TGGCGTTCTGAAAACTGGGA 59.818 50.000 0.00 0.00 0.00 4.37
6072 8673 2.861462 TTTGGCGTTCTGAAAACTGG 57.139 45.000 0.00 0.00 0.00 4.00
6084 8685 8.014517 CAGCAAAATGTTTATTTATTTTGGCGT 58.985 29.630 18.44 4.93 46.56 5.68
6086 8687 9.676195 AACAGCAAAATGTTTATTTATTTTGGC 57.324 25.926 18.44 12.83 46.56 4.52
6138 8740 9.678260 AGAAGATTAGAACATAGTTGCTGATTT 57.322 29.630 0.00 0.00 0.00 2.17
6142 8744 8.939929 TCAAAGAAGATTAGAACATAGTTGCTG 58.060 33.333 0.00 0.00 0.00 4.41
6163 8765 9.663904 TGAGTTTATTTCAAAGTTCGATCAAAG 57.336 29.630 0.00 0.00 0.00 2.77
6181 8783 3.128242 GCAGCAGCAAGTCATGAGTTTAT 59.872 43.478 13.25 2.31 41.58 1.40
6192 8794 0.524862 GCAACATAGCAGCAGCAAGT 59.475 50.000 3.17 0.00 45.49 3.16
6196 8798 3.594568 TGGCAACATAGCAGCAGC 58.405 55.556 0.00 0.00 46.17 5.25
6207 8809 8.437742 CAAAGTTTGATCAAAGAATATGGCAAC 58.562 33.333 21.05 5.81 0.00 4.17
6208 8810 7.118101 GCAAAGTTTGATCAAAGAATATGGCAA 59.882 33.333 21.05 0.00 0.00 4.52
6209 8811 6.591062 GCAAAGTTTGATCAAAGAATATGGCA 59.409 34.615 21.05 0.00 0.00 4.92
6210 8812 6.591062 TGCAAAGTTTGATCAAAGAATATGGC 59.409 34.615 21.05 16.82 0.00 4.40
6211 8813 7.063780 GGTGCAAAGTTTGATCAAAGAATATGG 59.936 37.037 21.05 8.51 0.00 2.74
6212 8814 7.599621 TGGTGCAAAGTTTGATCAAAGAATATG 59.400 33.333 21.05 15.41 0.00 1.78
6213 8815 7.669427 TGGTGCAAAGTTTGATCAAAGAATAT 58.331 30.769 21.05 3.91 0.00 1.28
6214 8816 7.048629 TGGTGCAAAGTTTGATCAAAGAATA 57.951 32.000 21.05 3.77 0.00 1.75
6215 8817 5.916318 TGGTGCAAAGTTTGATCAAAGAAT 58.084 33.333 21.05 7.79 0.00 2.40
6216 8818 5.336150 TGGTGCAAAGTTTGATCAAAGAA 57.664 34.783 21.05 1.37 0.00 2.52
6217 8819 4.998671 TGGTGCAAAGTTTGATCAAAGA 57.001 36.364 21.05 0.00 0.00 2.52
6218 8820 5.581874 AGTTTGGTGCAAAGTTTGATCAAAG 59.418 36.000 21.05 10.56 33.83 2.77
6219 8821 5.486526 AGTTTGGTGCAAAGTTTGATCAAA 58.513 33.333 19.82 16.91 33.83 2.69
6220 8822 5.083533 AGTTTGGTGCAAAGTTTGATCAA 57.916 34.783 19.82 14.98 33.83 2.57
6221 8823 4.159321 TGAGTTTGGTGCAAAGTTTGATCA 59.841 37.500 19.82 10.22 37.16 2.92
6222 8824 4.681744 TGAGTTTGGTGCAAAGTTTGATC 58.318 39.130 19.82 10.28 37.16 2.92
6223 8825 4.734398 TGAGTTTGGTGCAAAGTTTGAT 57.266 36.364 19.82 0.00 37.16 2.57
6224 8826 4.431809 CATGAGTTTGGTGCAAAGTTTGA 58.568 39.130 19.82 1.93 37.16 2.69
6236 8838 1.891150 AGCAGAAAGGCATGAGTTTGG 59.109 47.619 0.00 0.00 35.83 3.28
6237 8839 2.555325 TCAGCAGAAAGGCATGAGTTTG 59.445 45.455 0.00 0.00 35.83 2.93
6296 8898 1.055849 TGTTTGTAGCCTCAGCCTCA 58.944 50.000 0.00 0.00 41.25 3.86
6390 8992 6.760770 TCAAATCATTTTGGTGGAGTTTTCAC 59.239 34.615 0.00 0.00 42.10 3.18
6401 9003 4.403432 AGATCGGCATCAAATCATTTTGGT 59.597 37.500 0.00 0.00 42.10 3.67
6460 9062 6.780706 TTTCCAGTCAAGAAACGAGTATTC 57.219 37.500 0.00 0.00 0.00 1.75
6519 9122 6.376581 AGTGCAGAAATAGGAAAAGAATCAGG 59.623 38.462 0.00 0.00 0.00 3.86
6583 9186 1.533625 TTCCATTTTCTGGCGTGAGG 58.466 50.000 0.00 0.00 45.52 3.86
6676 9279 1.788886 GAGTGTCGTACGAACAAACCC 59.211 52.381 21.39 6.18 0.00 4.11
6686 9289 3.850273 CCTGTAACAATCGAGTGTCGTAC 59.150 47.826 19.93 18.09 41.35 3.67
6714 9325 5.244402 TCACCAGTCCTACGAAGAACATTTA 59.756 40.000 0.00 0.00 0.00 1.40
6745 9357 3.979948 TGTCGTTTTCTCGGTGATGTAA 58.020 40.909 0.00 0.00 0.00 2.41
6798 9441 0.804544 ACCGTTGTGCGTCCATATCG 60.805 55.000 0.00 0.00 39.32 2.92
6928 9571 2.190578 GCTTGGAGGGACCGATGG 59.809 66.667 0.00 0.00 42.61 3.51
6975 9618 4.790861 GACGGCGGGACTTCGACC 62.791 72.222 13.24 0.00 34.05 4.79
7318 9961 2.209064 TTTCTCGCCGAGACGAAGGG 62.209 60.000 17.79 0.00 42.39 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.