Multiple sequence alignment - TraesCS6A01G313100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G313100 chr6A 100.000 2300 0 0 1 2300 549623300 549625599 0.000000e+00 4248
1 TraesCS6A01G313100 chr6A 87.484 799 58 22 1010 1805 53153446 53154205 0.000000e+00 883
2 TraesCS6A01G313100 chr6A 97.231 325 4 2 1981 2300 48778584 48778260 1.550000e-151 545
3 TraesCS6A01G313100 chr6A 97.799 318 2 2 1988 2300 359154335 359154018 5.590000e-151 544
4 TraesCS6A01G313100 chr5A 91.920 1844 98 22 1 1810 327929680 327927854 0.000000e+00 2532
5 TraesCS6A01G313100 chr5A 90.934 1842 104 23 1 1810 619774861 619773051 0.000000e+00 2418
6 TraesCS6A01G313100 chr5A 98.119 319 1 2 1984 2297 245456781 245457099 3.340000e-153 551
7 TraesCS6A01G313100 chr5A 97.516 322 3 2 1984 2300 670116372 670116693 1.550000e-151 545
8 TraesCS6A01G313100 chr6D 92.538 1769 97 15 1 1739 449137529 449135766 0.000000e+00 2503
9 TraesCS6A01G313100 chr6D 91.047 1843 84 29 1 1809 325418344 325416549 0.000000e+00 2414
10 TraesCS6A01G313100 chr6D 90.517 1044 48 23 746 1747 421864549 421865583 0.000000e+00 1332
11 TraesCS6A01G313100 chr6D 91.848 184 15 0 1800 1983 403654819 403654636 8.150000e-65 257
12 TraesCS6A01G313100 chr2A 91.667 1800 100 17 1 1767 704738305 704736523 0.000000e+00 2447
13 TraesCS6A01G313100 chr2A 97.214 323 3 3 1984 2300 636048700 636048378 2.010000e-150 542
14 TraesCS6A01G313100 chr4D 91.103 1832 86 23 1 1801 481887560 481889345 0.000000e+00 2409
15 TraesCS6A01G313100 chr4D 95.040 1008 49 1 1 1007 502108289 502107282 0.000000e+00 1583
16 TraesCS6A01G313100 chr4D 94.653 1010 53 1 1 1009 502730282 502729273 0.000000e+00 1565
17 TraesCS6A01G313100 chr4D 86.667 195 9 5 1609 1802 486557372 486557194 1.390000e-47 200
18 TraesCS6A01G313100 chr2D 91.507 1778 105 11 1 1739 469742508 469740738 0.000000e+00 2405
19 TraesCS6A01G313100 chr2D 94.653 1010 51 3 1 1009 619798398 619797391 0.000000e+00 1563
20 TraesCS6A01G313100 chr2D 89.381 791 40 19 1012 1802 350067581 350068327 0.000000e+00 955
21 TraesCS6A01G313100 chr1D 90.766 1841 91 30 1 1808 278101940 278100146 0.000000e+00 2385
22 TraesCS6A01G313100 chr1D 90.879 1195 65 14 586 1748 139117686 139116504 0.000000e+00 1563
23 TraesCS6A01G313100 chr3D 91.558 1765 84 27 1 1735 1283387 1281658 0.000000e+00 2374
24 TraesCS6A01G313100 chr3D 94.851 1010 51 1 1 1009 553936823 553935814 0.000000e+00 1576
25 TraesCS6A01G313100 chr2B 90.071 1833 102 28 1 1803 206293141 206294923 0.000000e+00 2303
26 TraesCS6A01G313100 chr5D 92.329 730 52 3 1010 1739 179971409 179970684 0.000000e+00 1035
27 TraesCS6A01G313100 chr4B 91.486 740 51 5 1010 1747 619246316 619247045 0.000000e+00 1007
28 TraesCS6A01G313100 chr5B 87.871 808 69 14 1010 1817 549779381 549778603 0.000000e+00 922
29 TraesCS6A01G313100 chr7B 87.547 803 67 17 1010 1806 460250671 460251446 0.000000e+00 898
30 TraesCS6A01G313100 chr7A 97.826 322 2 1 1984 2300 363999749 364000070 3.340000e-153 551
31 TraesCS6A01G313100 chr4A 97.826 322 2 2 1984 2300 40415981 40416302 3.340000e-153 551
32 TraesCS6A01G313100 chr3A 97.516 322 2 3 1984 2300 512586453 512586773 1.550000e-151 545
33 TraesCS6A01G313100 chr1A 97.205 322 4 2 1984 2300 344168640 344168961 7.230000e-150 540


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G313100 chr6A 549623300 549625599 2299 False 4248 4248 100.000 1 2300 1 chr6A.!!$F2 2299
1 TraesCS6A01G313100 chr6A 53153446 53154205 759 False 883 883 87.484 1010 1805 1 chr6A.!!$F1 795
2 TraesCS6A01G313100 chr5A 327927854 327929680 1826 True 2532 2532 91.920 1 1810 1 chr5A.!!$R1 1809
3 TraesCS6A01G313100 chr5A 619773051 619774861 1810 True 2418 2418 90.934 1 1810 1 chr5A.!!$R2 1809
4 TraesCS6A01G313100 chr6D 449135766 449137529 1763 True 2503 2503 92.538 1 1739 1 chr6D.!!$R3 1738
5 TraesCS6A01G313100 chr6D 325416549 325418344 1795 True 2414 2414 91.047 1 1809 1 chr6D.!!$R1 1808
6 TraesCS6A01G313100 chr6D 421864549 421865583 1034 False 1332 1332 90.517 746 1747 1 chr6D.!!$F1 1001
7 TraesCS6A01G313100 chr2A 704736523 704738305 1782 True 2447 2447 91.667 1 1767 1 chr2A.!!$R2 1766
8 TraesCS6A01G313100 chr4D 481887560 481889345 1785 False 2409 2409 91.103 1 1801 1 chr4D.!!$F1 1800
9 TraesCS6A01G313100 chr4D 502107282 502108289 1007 True 1583 1583 95.040 1 1007 1 chr4D.!!$R2 1006
10 TraesCS6A01G313100 chr4D 502729273 502730282 1009 True 1565 1565 94.653 1 1009 1 chr4D.!!$R3 1008
11 TraesCS6A01G313100 chr2D 469740738 469742508 1770 True 2405 2405 91.507 1 1739 1 chr2D.!!$R1 1738
12 TraesCS6A01G313100 chr2D 619797391 619798398 1007 True 1563 1563 94.653 1 1009 1 chr2D.!!$R2 1008
13 TraesCS6A01G313100 chr2D 350067581 350068327 746 False 955 955 89.381 1012 1802 1 chr2D.!!$F1 790
14 TraesCS6A01G313100 chr1D 278100146 278101940 1794 True 2385 2385 90.766 1 1808 1 chr1D.!!$R2 1807
15 TraesCS6A01G313100 chr1D 139116504 139117686 1182 True 1563 1563 90.879 586 1748 1 chr1D.!!$R1 1162
16 TraesCS6A01G313100 chr3D 1281658 1283387 1729 True 2374 2374 91.558 1 1735 1 chr3D.!!$R1 1734
17 TraesCS6A01G313100 chr3D 553935814 553936823 1009 True 1576 1576 94.851 1 1009 1 chr3D.!!$R2 1008
18 TraesCS6A01G313100 chr2B 206293141 206294923 1782 False 2303 2303 90.071 1 1803 1 chr2B.!!$F1 1802
19 TraesCS6A01G313100 chr5D 179970684 179971409 725 True 1035 1035 92.329 1010 1739 1 chr5D.!!$R1 729
20 TraesCS6A01G313100 chr4B 619246316 619247045 729 False 1007 1007 91.486 1010 1747 1 chr4B.!!$F1 737
21 TraesCS6A01G313100 chr5B 549778603 549779381 778 True 922 922 87.871 1010 1817 1 chr5B.!!$R1 807
22 TraesCS6A01G313100 chr7B 460250671 460251446 775 False 898 898 87.547 1010 1806 1 chr7B.!!$F1 796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 751 0.25589 GCAGCATACAGGGGAGGAAA 59.744 55.0 0.0 0.0 0.0 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 1944 0.032615 AAAAACAGGAGCACCCACCA 60.033 50.0 0.0 0.0 37.41 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.369052 CCGTTAAGCTTGGTGTAGGATCA 60.369 47.826 9.86 0.00 0.00 2.92
54 55 3.806591 ACGAACCGTTGATGTCGAT 57.193 47.368 0.00 0.00 36.35 3.59
202 203 2.176045 GTCCATTGTTTCCCCGGAAAT 58.824 47.619 11.93 0.00 44.52 2.17
205 206 3.010808 TCCATTGTTTCCCCGGAAATAGT 59.989 43.478 11.93 3.91 44.52 2.12
213 214 3.507411 TCCCCGGAAATAGTAGAGGATG 58.493 50.000 0.73 0.00 0.00 3.51
278 279 4.701651 TCTGTGGATGCTTCGAATGAAAAT 59.298 37.500 0.00 0.00 32.66 1.82
315 316 1.996798 TTGTCGAGACCTTCAGGAGT 58.003 50.000 0.00 0.00 38.94 3.85
361 362 1.901591 CACCAGTGTGGAAGAGCAAT 58.098 50.000 0.00 0.00 40.96 3.56
671 684 4.163839 CCATTTTTAGGATTGCATTGGGGA 59.836 41.667 0.00 0.00 0.00 4.81
692 705 6.226787 GGGAAATAGATGGTACTCATGTCAG 58.773 44.000 2.07 0.00 35.97 3.51
737 751 0.255890 GCAGCATACAGGGGAGGAAA 59.744 55.000 0.00 0.00 0.00 3.13
821 835 0.909610 CTGGCTAGGAGGGGTCAACA 60.910 60.000 0.00 0.00 0.00 3.33
865 879 2.562738 ACAACATGAGTCGACCTGATGA 59.437 45.455 20.15 0.00 36.97 2.92
883 897 2.092323 TGAGATCAACATCCTCGACGT 58.908 47.619 0.00 0.00 0.00 4.34
905 919 3.055094 TCAAGTTCTACCTTGGAGATGCC 60.055 47.826 0.00 0.00 41.72 4.40
907 921 1.480954 GTTCTACCTTGGAGATGCCGA 59.519 52.381 0.00 0.00 40.66 5.54
1022 1065 1.896465 GAGCTGTACTGTTGAGAGGGT 59.104 52.381 0.00 0.00 0.00 4.34
1247 1290 4.853924 ATGACGCTTGGAAGAACAAAAT 57.146 36.364 0.00 0.00 0.00 1.82
1258 1301 4.340950 GGAAGAACAAAATGTTGGAGTGGA 59.659 41.667 0.00 0.00 41.28 4.02
1259 1303 5.163457 GGAAGAACAAAATGTTGGAGTGGAA 60.163 40.000 0.00 0.00 41.28 3.53
1385 1502 3.981212 AGAGGAAGAGGAAGAGGAAGAG 58.019 50.000 0.00 0.00 0.00 2.85
1386 1503 3.031013 GAGGAAGAGGAAGAGGAAGAGG 58.969 54.545 0.00 0.00 0.00 3.69
1387 1504 2.657459 AGGAAGAGGAAGAGGAAGAGGA 59.343 50.000 0.00 0.00 0.00 3.71
1388 1505 3.078305 AGGAAGAGGAAGAGGAAGAGGAA 59.922 47.826 0.00 0.00 0.00 3.36
1389 1506 3.450817 GGAAGAGGAAGAGGAAGAGGAAG 59.549 52.174 0.00 0.00 0.00 3.46
1390 1507 4.349365 GAAGAGGAAGAGGAAGAGGAAGA 58.651 47.826 0.00 0.00 0.00 2.87
1391 1508 3.981212 AGAGGAAGAGGAAGAGGAAGAG 58.019 50.000 0.00 0.00 0.00 2.85
1392 1509 3.031013 GAGGAAGAGGAAGAGGAAGAGG 58.969 54.545 0.00 0.00 0.00 3.69
1393 1510 1.484653 GGAAGAGGAAGAGGAAGAGGC 59.515 57.143 0.00 0.00 0.00 4.70
1394 1511 2.183679 GAAGAGGAAGAGGAAGAGGCA 58.816 52.381 0.00 0.00 0.00 4.75
1395 1512 1.864669 AGAGGAAGAGGAAGAGGCAG 58.135 55.000 0.00 0.00 0.00 4.85
1396 1513 1.360852 AGAGGAAGAGGAAGAGGCAGA 59.639 52.381 0.00 0.00 0.00 4.26
1489 1612 9.197694 CATTTGATAGTAGTTAGGATGTACTGC 57.802 37.037 0.00 0.00 0.00 4.40
1614 1739 3.467374 TGTCATATGTGCGCCTAATGA 57.533 42.857 4.18 6.33 0.00 2.57
1679 1804 1.152610 CTAGGGGCATGCAGGCAAT 60.153 57.895 26.25 12.34 46.44 3.56
1699 1829 5.528690 GCAATCAAACTATGTGCATCTAGGA 59.471 40.000 9.51 0.20 0.00 2.94
1811 1943 2.747686 ACACGCCCTAGGTGTTGG 59.252 61.111 8.29 0.00 44.78 3.77
1812 1944 2.144738 ACACGCCCTAGGTGTTGGT 61.145 57.895 8.29 0.00 44.78 3.67
1817 1949 1.378762 CCCTAGGTGTTGGTGGTGG 59.621 63.158 8.29 0.00 0.00 4.61
1818 1950 1.378762 CCTAGGTGTTGGTGGTGGG 59.621 63.158 0.00 0.00 0.00 4.61
1819 1951 1.423794 CCTAGGTGTTGGTGGTGGGT 61.424 60.000 0.00 0.00 0.00 4.51
1820 1952 0.250727 CTAGGTGTTGGTGGTGGGTG 60.251 60.000 0.00 0.00 0.00 4.61
1821 1953 2.346284 TAGGTGTTGGTGGTGGGTGC 62.346 60.000 0.00 0.00 0.00 5.01
1822 1954 2.123897 GTGTTGGTGGTGGGTGCT 60.124 61.111 0.00 0.00 0.00 4.40
1823 1955 2.193536 GTGTTGGTGGTGGGTGCTC 61.194 63.158 0.00 0.00 0.00 4.26
1824 1956 2.597510 GTTGGTGGTGGGTGCTCC 60.598 66.667 0.00 0.00 0.00 4.70
1825 1957 2.776526 TTGGTGGTGGGTGCTCCT 60.777 61.111 4.53 0.00 36.20 3.69
1826 1958 3.132029 TTGGTGGTGGGTGCTCCTG 62.132 63.158 4.53 0.00 36.20 3.86
1827 1959 3.570212 GGTGGTGGGTGCTCCTGT 61.570 66.667 4.53 0.00 36.20 4.00
1828 1960 2.515901 GTGGTGGGTGCTCCTGTT 59.484 61.111 4.53 0.00 36.20 3.16
1829 1961 1.152756 GTGGTGGGTGCTCCTGTTT 60.153 57.895 4.53 0.00 36.20 2.83
1830 1962 0.755327 GTGGTGGGTGCTCCTGTTTT 60.755 55.000 4.53 0.00 36.20 2.43
1831 1963 0.032615 TGGTGGGTGCTCCTGTTTTT 60.033 50.000 4.53 0.00 36.20 1.94
1832 1964 0.673985 GGTGGGTGCTCCTGTTTTTC 59.326 55.000 4.53 0.00 36.20 2.29
1833 1965 1.692411 GTGGGTGCTCCTGTTTTTCT 58.308 50.000 4.53 0.00 36.20 2.52
1834 1966 1.609072 GTGGGTGCTCCTGTTTTTCTC 59.391 52.381 4.53 0.00 36.20 2.87
1835 1967 1.248486 GGGTGCTCCTGTTTTTCTCC 58.752 55.000 4.53 0.00 0.00 3.71
1836 1968 1.202940 GGGTGCTCCTGTTTTTCTCCT 60.203 52.381 4.53 0.00 0.00 3.69
1837 1969 2.155279 GGTGCTCCTGTTTTTCTCCTC 58.845 52.381 0.00 0.00 0.00 3.71
1838 1970 2.224646 GGTGCTCCTGTTTTTCTCCTCT 60.225 50.000 0.00 0.00 0.00 3.69
1839 1971 3.070748 GTGCTCCTGTTTTTCTCCTCTC 58.929 50.000 0.00 0.00 0.00 3.20
1840 1972 2.705658 TGCTCCTGTTTTTCTCCTCTCA 59.294 45.455 0.00 0.00 0.00 3.27
1841 1973 3.328931 TGCTCCTGTTTTTCTCCTCTCAT 59.671 43.478 0.00 0.00 0.00 2.90
1842 1974 3.938334 GCTCCTGTTTTTCTCCTCTCATC 59.062 47.826 0.00 0.00 0.00 2.92
1843 1975 4.323409 GCTCCTGTTTTTCTCCTCTCATCT 60.323 45.833 0.00 0.00 0.00 2.90
1844 1976 5.105146 GCTCCTGTTTTTCTCCTCTCATCTA 60.105 44.000 0.00 0.00 0.00 1.98
1845 1977 6.287589 TCCTGTTTTTCTCCTCTCATCTAC 57.712 41.667 0.00 0.00 0.00 2.59
1846 1978 5.780282 TCCTGTTTTTCTCCTCTCATCTACA 59.220 40.000 0.00 0.00 0.00 2.74
1847 1979 5.872070 CCTGTTTTTCTCCTCTCATCTACAC 59.128 44.000 0.00 0.00 0.00 2.90
1848 1980 5.470368 TGTTTTTCTCCTCTCATCTACACG 58.530 41.667 0.00 0.00 0.00 4.49
1849 1981 5.010719 TGTTTTTCTCCTCTCATCTACACGT 59.989 40.000 0.00 0.00 0.00 4.49
1850 1982 4.703645 TTTCTCCTCTCATCTACACGTG 57.296 45.455 15.48 15.48 0.00 4.49
1851 1983 3.629142 TCTCCTCTCATCTACACGTGA 57.371 47.619 25.01 4.97 0.00 4.35
1852 1984 3.271729 TCTCCTCTCATCTACACGTGAC 58.728 50.000 25.01 0.00 0.00 3.67
1853 1985 2.356382 CTCCTCTCATCTACACGTGACC 59.644 54.545 25.01 0.00 0.00 4.02
1854 1986 2.092323 CCTCTCATCTACACGTGACCA 58.908 52.381 25.01 4.96 0.00 4.02
1855 1987 2.159366 CCTCTCATCTACACGTGACCAC 60.159 54.545 25.01 0.00 0.00 4.16
1856 1988 2.488153 CTCTCATCTACACGTGACCACA 59.512 50.000 25.01 0.99 0.00 4.17
1857 1989 3.089284 TCTCATCTACACGTGACCACAT 58.911 45.455 25.01 0.00 0.00 3.21
1858 1990 3.128764 TCTCATCTACACGTGACCACATC 59.871 47.826 25.01 0.00 0.00 3.06
1859 1991 2.823154 TCATCTACACGTGACCACATCA 59.177 45.455 25.01 0.00 33.79 3.07
1860 1992 3.447229 TCATCTACACGTGACCACATCAT 59.553 43.478 25.01 0.00 40.28 2.45
1861 1993 3.953712 TCTACACGTGACCACATCATT 57.046 42.857 25.01 0.00 40.28 2.57
1862 1994 4.265904 TCTACACGTGACCACATCATTT 57.734 40.909 25.01 0.00 40.28 2.32
1863 1995 3.993736 TCTACACGTGACCACATCATTTG 59.006 43.478 25.01 0.00 40.28 2.32
1864 1996 1.879380 ACACGTGACCACATCATTTGG 59.121 47.619 25.01 0.00 40.28 3.28
1870 2002 2.514458 ACCACATCATTTGGTCTCCC 57.486 50.000 0.00 0.00 44.54 4.30
1871 2003 1.340017 ACCACATCATTTGGTCTCCCG 60.340 52.381 0.00 0.00 44.54 5.14
1872 2004 0.734889 CACATCATTTGGTCTCCCGC 59.265 55.000 0.00 0.00 0.00 6.13
1873 2005 0.394352 ACATCATTTGGTCTCCCGCC 60.394 55.000 0.00 0.00 0.00 6.13
1874 2006 1.103398 CATCATTTGGTCTCCCGCCC 61.103 60.000 0.00 0.00 0.00 6.13
1875 2007 1.570857 ATCATTTGGTCTCCCGCCCA 61.571 55.000 0.00 0.00 0.00 5.36
1876 2008 2.046285 CATTTGGTCTCCCGCCCAC 61.046 63.158 0.00 0.00 0.00 4.61
1877 2009 2.231380 ATTTGGTCTCCCGCCCACT 61.231 57.895 0.00 0.00 0.00 4.00
1878 2010 1.789576 ATTTGGTCTCCCGCCCACTT 61.790 55.000 0.00 0.00 0.00 3.16
1879 2011 2.406002 TTTGGTCTCCCGCCCACTTC 62.406 60.000 0.00 0.00 0.00 3.01
1880 2012 4.097361 GGTCTCCCGCCCACTTCC 62.097 72.222 0.00 0.00 0.00 3.46
1881 2013 3.319198 GTCTCCCGCCCACTTCCA 61.319 66.667 0.00 0.00 0.00 3.53
1882 2014 2.285368 TCTCCCGCCCACTTCCAT 60.285 61.111 0.00 0.00 0.00 3.41
1883 2015 1.923395 TCTCCCGCCCACTTCCATT 60.923 57.895 0.00 0.00 0.00 3.16
1884 2016 1.000896 CTCCCGCCCACTTCCATTT 60.001 57.895 0.00 0.00 0.00 2.32
1885 2017 0.611896 CTCCCGCCCACTTCCATTTT 60.612 55.000 0.00 0.00 0.00 1.82
1886 2018 0.610785 TCCCGCCCACTTCCATTTTC 60.611 55.000 0.00 0.00 0.00 2.29
1887 2019 1.604147 CCCGCCCACTTCCATTTTCC 61.604 60.000 0.00 0.00 0.00 3.13
1888 2020 0.897863 CCGCCCACTTCCATTTTCCA 60.898 55.000 0.00 0.00 0.00 3.53
1889 2021 0.965439 CGCCCACTTCCATTTTCCAA 59.035 50.000 0.00 0.00 0.00 3.53
1890 2022 1.336795 CGCCCACTTCCATTTTCCAAC 60.337 52.381 0.00 0.00 0.00 3.77
1891 2023 1.691434 GCCCACTTCCATTTTCCAACA 59.309 47.619 0.00 0.00 0.00 3.33
1892 2024 2.289010 GCCCACTTCCATTTTCCAACAG 60.289 50.000 0.00 0.00 0.00 3.16
1893 2025 2.299867 CCCACTTCCATTTTCCAACAGG 59.700 50.000 0.00 0.00 0.00 4.00
1894 2026 3.230134 CCACTTCCATTTTCCAACAGGA 58.770 45.455 0.00 0.00 0.00 3.86
1895 2027 3.256631 CCACTTCCATTTTCCAACAGGAG 59.743 47.826 0.00 0.00 31.86 3.69
1896 2028 2.893489 ACTTCCATTTTCCAACAGGAGC 59.107 45.455 0.00 0.00 31.86 4.70
1897 2029 1.533625 TCCATTTTCCAACAGGAGCG 58.466 50.000 0.00 0.00 31.86 5.03
1898 2030 1.073125 TCCATTTTCCAACAGGAGCGA 59.927 47.619 0.00 0.00 31.86 4.93
1899 2031 1.200020 CCATTTTCCAACAGGAGCGAC 59.800 52.381 0.00 0.00 31.86 5.19
1900 2032 1.135972 CATTTTCCAACAGGAGCGACG 60.136 52.381 0.00 0.00 31.86 5.12
1901 2033 1.503818 TTTTCCAACAGGAGCGACGC 61.504 55.000 13.03 13.03 31.86 5.19
1902 2034 2.377628 TTTCCAACAGGAGCGACGCT 62.378 55.000 24.77 24.77 43.88 5.07
1911 2043 3.198582 AGCGACGCTCCTTAGTCC 58.801 61.111 18.46 0.00 30.62 3.85
1912 2044 1.677966 AGCGACGCTCCTTAGTCCA 60.678 57.895 18.46 0.00 30.62 4.02
1913 2045 1.226717 GCGACGCTCCTTAGTCCAG 60.227 63.158 13.73 0.00 34.10 3.86
1914 2046 1.654954 GCGACGCTCCTTAGTCCAGA 61.655 60.000 13.73 0.00 34.10 3.86
1915 2047 1.025812 CGACGCTCCTTAGTCCAGAT 58.974 55.000 0.00 0.00 34.10 2.90
1916 2048 1.002251 CGACGCTCCTTAGTCCAGATC 60.002 57.143 0.00 0.00 34.10 2.75
1917 2049 1.002251 GACGCTCCTTAGTCCAGATCG 60.002 57.143 0.00 0.00 0.00 3.69
1918 2050 0.312416 CGCTCCTTAGTCCAGATCGG 59.688 60.000 0.00 0.00 0.00 4.18
1919 2051 0.676736 GCTCCTTAGTCCAGATCGGG 59.323 60.000 5.39 5.39 34.36 5.14
1920 2052 1.754555 GCTCCTTAGTCCAGATCGGGA 60.755 57.143 10.89 10.89 34.36 5.14
1921 2053 2.235016 CTCCTTAGTCCAGATCGGGAG 58.765 57.143 15.51 3.32 37.71 4.30
1922 2054 1.133450 TCCTTAGTCCAGATCGGGAGG 60.133 57.143 15.51 12.63 37.71 4.30
1923 2055 1.333177 CTTAGTCCAGATCGGGAGGG 58.667 60.000 15.51 2.33 37.71 4.30
1924 2056 0.759436 TTAGTCCAGATCGGGAGGGC 60.759 60.000 15.51 3.87 37.71 5.19
1925 2057 1.944896 TAGTCCAGATCGGGAGGGCA 61.945 60.000 15.51 0.00 37.71 5.36
1926 2058 2.444706 TCCAGATCGGGAGGGCAG 60.445 66.667 10.89 0.00 34.36 4.85
1927 2059 2.444706 CCAGATCGGGAGGGCAGA 60.445 66.667 5.91 0.00 0.00 4.26
1928 2060 2.506061 CCAGATCGGGAGGGCAGAG 61.506 68.421 5.91 0.00 0.00 3.35
1929 2061 2.123077 AGATCGGGAGGGCAGAGG 60.123 66.667 0.00 0.00 0.00 3.69
1930 2062 2.123251 GATCGGGAGGGCAGAGGA 60.123 66.667 0.00 0.00 0.00 3.71
1931 2063 2.444895 ATCGGGAGGGCAGAGGAC 60.445 66.667 0.00 0.00 0.00 3.85
1932 2064 2.937959 GATCGGGAGGGCAGAGGACT 62.938 65.000 0.00 0.00 0.00 3.85
1933 2065 2.937959 ATCGGGAGGGCAGAGGACTC 62.938 65.000 0.00 0.00 0.00 3.36
1934 2066 2.366570 GGGAGGGCAGAGGACTCT 59.633 66.667 0.00 0.00 41.37 3.24
1942 2074 2.681778 AGAGGACTCTGCCCGGTG 60.682 66.667 0.00 0.00 38.75 4.94
1943 2075 2.680352 GAGGACTCTGCCCGGTGA 60.680 66.667 0.00 0.00 0.00 4.02
1944 2076 2.997897 AGGACTCTGCCCGGTGAC 60.998 66.667 0.00 0.00 0.00 3.67
1956 2088 3.996614 GGTGACGGTTTGATGGGG 58.003 61.111 0.00 0.00 0.00 4.96
1957 2089 2.340328 GGTGACGGTTTGATGGGGC 61.340 63.158 0.00 0.00 0.00 5.80
1958 2090 1.602323 GTGACGGTTTGATGGGGCA 60.602 57.895 0.00 0.00 0.00 5.36
1959 2091 0.965363 GTGACGGTTTGATGGGGCAT 60.965 55.000 0.00 0.00 0.00 4.40
1960 2092 0.251564 TGACGGTTTGATGGGGCATT 60.252 50.000 0.00 0.00 0.00 3.56
1961 2093 0.173255 GACGGTTTGATGGGGCATTG 59.827 55.000 0.00 0.00 0.00 2.82
1962 2094 1.257055 ACGGTTTGATGGGGCATTGG 61.257 55.000 0.00 0.00 0.00 3.16
1963 2095 0.969917 CGGTTTGATGGGGCATTGGA 60.970 55.000 0.00 0.00 0.00 3.53
1964 2096 0.826062 GGTTTGATGGGGCATTGGAG 59.174 55.000 0.00 0.00 0.00 3.86
1965 2097 0.826062 GTTTGATGGGGCATTGGAGG 59.174 55.000 0.00 0.00 0.00 4.30
1966 2098 0.977108 TTTGATGGGGCATTGGAGGC 60.977 55.000 0.00 0.00 0.00 4.70
1967 2099 2.165643 TTGATGGGGCATTGGAGGCA 62.166 55.000 0.00 0.00 35.46 4.75
1968 2100 1.152398 GATGGGGCATTGGAGGCAT 60.152 57.895 0.00 0.00 35.46 4.40
1969 2101 1.458777 ATGGGGCATTGGAGGCATG 60.459 57.895 0.00 0.00 35.46 4.06
1970 2102 2.841044 GGGGCATTGGAGGCATGG 60.841 66.667 0.00 0.00 35.46 3.66
1971 2103 2.042639 GGGCATTGGAGGCATGGT 60.043 61.111 0.00 0.00 35.46 3.55
1972 2104 2.129785 GGGCATTGGAGGCATGGTC 61.130 63.158 0.00 0.00 35.46 4.02
1973 2105 1.076485 GGCATTGGAGGCATGGTCT 60.076 57.895 0.00 0.00 0.00 3.85
1974 2106 1.389609 GGCATTGGAGGCATGGTCTG 61.390 60.000 0.00 0.00 0.00 3.51
1975 2107 1.389609 GCATTGGAGGCATGGTCTGG 61.390 60.000 0.00 0.00 0.00 3.86
1976 2108 0.033796 CATTGGAGGCATGGTCTGGT 60.034 55.000 0.00 0.00 0.00 4.00
1977 2109 0.033796 ATTGGAGGCATGGTCTGGTG 60.034 55.000 0.00 0.00 0.00 4.17
1978 2110 2.141011 TTGGAGGCATGGTCTGGTGG 62.141 60.000 0.00 0.00 0.00 4.61
1979 2111 2.606587 GGAGGCATGGTCTGGTGGT 61.607 63.158 0.00 0.00 0.00 4.16
1980 2112 1.380302 GAGGCATGGTCTGGTGGTT 59.620 57.895 0.00 0.00 0.00 3.67
1981 2113 0.251341 GAGGCATGGTCTGGTGGTTT 60.251 55.000 0.00 0.00 0.00 3.27
1982 2114 0.251341 AGGCATGGTCTGGTGGTTTC 60.251 55.000 0.00 0.00 0.00 2.78
1983 2115 0.251341 GGCATGGTCTGGTGGTTTCT 60.251 55.000 0.00 0.00 0.00 2.52
1984 2116 0.883833 GCATGGTCTGGTGGTTTCTG 59.116 55.000 0.00 0.00 0.00 3.02
1985 2117 1.819305 GCATGGTCTGGTGGTTTCTGT 60.819 52.381 0.00 0.00 0.00 3.41
1986 2118 2.586425 CATGGTCTGGTGGTTTCTGTT 58.414 47.619 0.00 0.00 0.00 3.16
1987 2119 2.051334 TGGTCTGGTGGTTTCTGTTG 57.949 50.000 0.00 0.00 0.00 3.33
1988 2120 1.318576 GGTCTGGTGGTTTCTGTTGG 58.681 55.000 0.00 0.00 0.00 3.77
1989 2121 1.133915 GGTCTGGTGGTTTCTGTTGGA 60.134 52.381 0.00 0.00 0.00 3.53
1990 2122 2.650322 GTCTGGTGGTTTCTGTTGGAA 58.350 47.619 0.00 0.00 0.00 3.53
1991 2123 3.222603 GTCTGGTGGTTTCTGTTGGAAT 58.777 45.455 0.00 0.00 33.53 3.01
1992 2124 3.636764 GTCTGGTGGTTTCTGTTGGAATT 59.363 43.478 0.00 0.00 33.53 2.17
1993 2125 4.099419 GTCTGGTGGTTTCTGTTGGAATTT 59.901 41.667 0.00 0.00 33.53 1.82
1994 2126 4.714308 TCTGGTGGTTTCTGTTGGAATTTT 59.286 37.500 0.00 0.00 33.53 1.82
1995 2127 4.764172 TGGTGGTTTCTGTTGGAATTTTG 58.236 39.130 0.00 0.00 33.53 2.44
1996 2128 3.559655 GGTGGTTTCTGTTGGAATTTTGC 59.440 43.478 0.00 0.00 33.53 3.68
1997 2129 4.441792 GTGGTTTCTGTTGGAATTTTGCT 58.558 39.130 0.00 0.00 33.53 3.91
1998 2130 5.452636 GGTGGTTTCTGTTGGAATTTTGCTA 60.453 40.000 0.00 0.00 33.53 3.49
1999 2131 5.691754 GTGGTTTCTGTTGGAATTTTGCTAG 59.308 40.000 0.00 0.00 33.53 3.42
2000 2132 5.362430 TGGTTTCTGTTGGAATTTTGCTAGT 59.638 36.000 0.00 0.00 33.53 2.57
2001 2133 6.547880 TGGTTTCTGTTGGAATTTTGCTAGTA 59.452 34.615 0.00 0.00 33.53 1.82
2002 2134 7.084486 GGTTTCTGTTGGAATTTTGCTAGTAG 58.916 38.462 0.00 0.00 33.53 2.57
2003 2135 6.817765 TTCTGTTGGAATTTTGCTAGTAGG 57.182 37.500 0.00 0.00 0.00 3.18
2004 2136 4.700213 TCTGTTGGAATTTTGCTAGTAGGC 59.300 41.667 0.00 0.00 0.00 3.93
2005 2137 3.761752 TGTTGGAATTTTGCTAGTAGGCC 59.238 43.478 0.00 0.00 0.00 5.19
2006 2138 4.017126 GTTGGAATTTTGCTAGTAGGCCT 58.983 43.478 11.78 11.78 0.00 5.19
2007 2139 4.316025 TGGAATTTTGCTAGTAGGCCTT 57.684 40.909 12.58 0.00 0.00 4.35
2008 2140 4.672899 TGGAATTTTGCTAGTAGGCCTTT 58.327 39.130 12.58 1.84 0.00 3.11
2009 2141 4.462483 TGGAATTTTGCTAGTAGGCCTTTG 59.538 41.667 12.58 0.00 0.00 2.77
2010 2142 4.142160 GGAATTTTGCTAGTAGGCCTTTGG 60.142 45.833 12.58 2.81 0.00 3.28
2030 2162 3.417069 GCCCAAAGCCCAACTAAAATT 57.583 42.857 0.00 0.00 34.35 1.82
2031 2163 3.334691 GCCCAAAGCCCAACTAAAATTC 58.665 45.455 0.00 0.00 34.35 2.17
2032 2164 3.007940 GCCCAAAGCCCAACTAAAATTCT 59.992 43.478 0.00 0.00 34.35 2.40
2033 2165 4.568956 CCCAAAGCCCAACTAAAATTCTG 58.431 43.478 0.00 0.00 0.00 3.02
2034 2166 4.283212 CCCAAAGCCCAACTAAAATTCTGA 59.717 41.667 0.00 0.00 0.00 3.27
2035 2167 5.221621 CCCAAAGCCCAACTAAAATTCTGAA 60.222 40.000 0.00 0.00 0.00 3.02
2036 2168 6.287525 CCAAAGCCCAACTAAAATTCTGAAA 58.712 36.000 0.00 0.00 0.00 2.69
2037 2169 6.936335 CCAAAGCCCAACTAAAATTCTGAAAT 59.064 34.615 0.00 0.00 0.00 2.17
2038 2170 7.445096 CCAAAGCCCAACTAAAATTCTGAAATT 59.555 33.333 0.00 0.00 36.64 1.82
2039 2171 8.498358 CAAAGCCCAACTAAAATTCTGAAATTC 58.502 33.333 0.00 0.00 33.93 2.17
2040 2172 7.544804 AGCCCAACTAAAATTCTGAAATTCT 57.455 32.000 0.00 0.00 33.93 2.40
2041 2173 7.606349 AGCCCAACTAAAATTCTGAAATTCTC 58.394 34.615 0.00 0.00 33.93 2.87
2042 2174 7.452813 AGCCCAACTAAAATTCTGAAATTCTCT 59.547 33.333 0.00 0.00 33.93 3.10
2043 2175 8.090831 GCCCAACTAAAATTCTGAAATTCTCTT 58.909 33.333 0.00 0.00 33.93 2.85
2044 2176 9.415544 CCCAACTAAAATTCTGAAATTCTCTTG 57.584 33.333 0.00 0.00 33.93 3.02
2045 2177 9.415544 CCAACTAAAATTCTGAAATTCTCTTGG 57.584 33.333 0.00 1.19 33.93 3.61
2046 2178 8.919661 CAACTAAAATTCTGAAATTCTCTTGGC 58.080 33.333 0.00 0.00 33.93 4.52
2047 2179 7.606349 ACTAAAATTCTGAAATTCTCTTGGCC 58.394 34.615 0.00 0.00 33.93 5.36
2048 2180 5.411831 AAATTCTGAAATTCTCTTGGCCC 57.588 39.130 0.00 0.00 33.93 5.80
2049 2181 3.524095 TTCTGAAATTCTCTTGGCCCA 57.476 42.857 0.00 0.00 0.00 5.36
2050 2182 3.744940 TCTGAAATTCTCTTGGCCCAT 57.255 42.857 0.00 0.00 0.00 4.00
2051 2183 4.051661 TCTGAAATTCTCTTGGCCCATT 57.948 40.909 0.00 0.00 0.00 3.16
2052 2184 4.019174 TCTGAAATTCTCTTGGCCCATTC 58.981 43.478 0.00 0.00 0.00 2.67
2053 2185 3.765511 CTGAAATTCTCTTGGCCCATTCA 59.234 43.478 0.00 0.00 0.00 2.57
2054 2186 4.355549 TGAAATTCTCTTGGCCCATTCAT 58.644 39.130 0.00 0.00 0.00 2.57
2055 2187 4.160814 TGAAATTCTCTTGGCCCATTCATG 59.839 41.667 0.00 0.00 0.00 3.07
2056 2188 1.477553 TTCTCTTGGCCCATTCATGC 58.522 50.000 0.00 0.00 0.00 4.06
2057 2189 0.332293 TCTCTTGGCCCATTCATGCA 59.668 50.000 0.00 0.00 0.00 3.96
2058 2190 0.458669 CTCTTGGCCCATTCATGCAC 59.541 55.000 0.00 0.00 0.00 4.57
2059 2191 0.251698 TCTTGGCCCATTCATGCACA 60.252 50.000 0.00 0.00 0.00 4.57
2060 2192 0.108520 CTTGGCCCATTCATGCACAC 60.109 55.000 0.00 0.00 0.00 3.82
2061 2193 0.830866 TTGGCCCATTCATGCACACA 60.831 50.000 0.00 0.00 0.00 3.72
2062 2194 0.615261 TGGCCCATTCATGCACACAT 60.615 50.000 0.00 0.00 36.79 3.21
2076 2208 2.827800 ACACATGTGAGTGGAGTGAG 57.172 50.000 31.94 1.10 43.72 3.51
2077 2209 2.042464 ACACATGTGAGTGGAGTGAGT 58.958 47.619 31.94 1.87 43.72 3.41
2078 2210 2.224137 ACACATGTGAGTGGAGTGAGTG 60.224 50.000 31.94 0.49 43.72 3.51
2079 2211 2.036346 CACATGTGAGTGGAGTGAGTGA 59.964 50.000 21.64 0.00 35.88 3.41
2080 2212 2.298446 ACATGTGAGTGGAGTGAGTGAG 59.702 50.000 0.00 0.00 0.00 3.51
2081 2213 1.332195 TGTGAGTGGAGTGAGTGAGG 58.668 55.000 0.00 0.00 0.00 3.86
2082 2214 0.037790 GTGAGTGGAGTGAGTGAGGC 60.038 60.000 0.00 0.00 0.00 4.70
2083 2215 0.178950 TGAGTGGAGTGAGTGAGGCT 60.179 55.000 0.00 0.00 0.00 4.58
2084 2216 1.075536 TGAGTGGAGTGAGTGAGGCTA 59.924 52.381 0.00 0.00 0.00 3.93
2085 2217 2.171840 GAGTGGAGTGAGTGAGGCTAA 58.828 52.381 0.00 0.00 0.00 3.09
2086 2218 2.563179 GAGTGGAGTGAGTGAGGCTAAA 59.437 50.000 0.00 0.00 0.00 1.85
2087 2219 2.564947 AGTGGAGTGAGTGAGGCTAAAG 59.435 50.000 0.00 0.00 0.00 1.85
2088 2220 2.300437 GTGGAGTGAGTGAGGCTAAAGT 59.700 50.000 0.00 0.00 0.00 2.66
2089 2221 2.972713 TGGAGTGAGTGAGGCTAAAGTT 59.027 45.455 0.00 0.00 0.00 2.66
2090 2222 3.391296 TGGAGTGAGTGAGGCTAAAGTTT 59.609 43.478 0.00 0.00 0.00 2.66
2091 2223 4.591498 TGGAGTGAGTGAGGCTAAAGTTTA 59.409 41.667 0.00 0.00 0.00 2.01
2092 2224 5.172205 GGAGTGAGTGAGGCTAAAGTTTAG 58.828 45.833 16.87 16.87 0.00 1.85
2093 2225 5.279556 GGAGTGAGTGAGGCTAAAGTTTAGT 60.280 44.000 20.95 5.16 0.00 2.24
2094 2226 5.785243 AGTGAGTGAGGCTAAAGTTTAGTC 58.215 41.667 17.75 17.75 0.00 2.59
2095 2227 4.930405 GTGAGTGAGGCTAAAGTTTAGTCC 59.070 45.833 20.94 20.40 0.00 3.85
2096 2228 4.020485 TGAGTGAGGCTAAAGTTTAGTCCC 60.020 45.833 20.94 12.08 0.00 4.46
2097 2229 3.908103 AGTGAGGCTAAAGTTTAGTCCCA 59.092 43.478 20.94 14.48 0.00 4.37
2098 2230 4.001652 GTGAGGCTAAAGTTTAGTCCCAC 58.998 47.826 21.36 21.36 0.00 4.61
2099 2231 3.008704 TGAGGCTAAAGTTTAGTCCCACC 59.991 47.826 20.94 13.85 0.00 4.61
2100 2232 2.307980 AGGCTAAAGTTTAGTCCCACCC 59.692 50.000 20.94 13.24 0.00 4.61
2101 2233 2.619849 GGCTAAAGTTTAGTCCCACCCC 60.620 54.545 20.95 10.04 0.00 4.95
2102 2234 2.938314 GCTAAAGTTTAGTCCCACCCCG 60.938 54.545 20.95 0.00 0.00 5.73
2103 2235 0.402887 AAAGTTTAGTCCCACCCCGG 59.597 55.000 0.00 0.00 0.00 5.73
2104 2236 0.474273 AAGTTTAGTCCCACCCCGGA 60.474 55.000 0.73 0.00 36.56 5.14
2105 2237 0.474273 AGTTTAGTCCCACCCCGGAA 60.474 55.000 0.73 0.00 36.56 4.30
2106 2238 0.035725 GTTTAGTCCCACCCCGGAAG 60.036 60.000 0.73 0.00 36.56 3.46
2107 2239 0.474273 TTTAGTCCCACCCCGGAAGT 60.474 55.000 0.73 0.00 36.56 3.01
2108 2240 0.474273 TTAGTCCCACCCCGGAAGTT 60.474 55.000 0.73 0.00 36.56 2.66
2109 2241 1.196104 TAGTCCCACCCCGGAAGTTG 61.196 60.000 0.73 0.00 36.56 3.16
2110 2242 2.122324 TCCCACCCCGGAAGTTGA 60.122 61.111 0.73 0.00 36.56 3.18
2111 2243 2.221299 TCCCACCCCGGAAGTTGAG 61.221 63.158 0.73 0.00 36.56 3.02
2112 2244 2.221299 CCCACCCCGGAAGTTGAGA 61.221 63.158 0.73 0.00 36.56 3.27
2113 2245 1.296715 CCACCCCGGAAGTTGAGAG 59.703 63.158 0.73 0.00 36.56 3.20
2114 2246 1.192146 CCACCCCGGAAGTTGAGAGA 61.192 60.000 0.73 0.00 36.56 3.10
2115 2247 0.247736 CACCCCGGAAGTTGAGAGAG 59.752 60.000 0.73 0.00 0.00 3.20
2116 2248 0.114560 ACCCCGGAAGTTGAGAGAGA 59.885 55.000 0.73 0.00 0.00 3.10
2117 2249 0.820871 CCCCGGAAGTTGAGAGAGAG 59.179 60.000 0.73 0.00 0.00 3.20
2118 2250 1.551452 CCCGGAAGTTGAGAGAGAGT 58.449 55.000 0.73 0.00 0.00 3.24
2119 2251 1.896465 CCCGGAAGTTGAGAGAGAGTT 59.104 52.381 0.73 0.00 0.00 3.01
2120 2252 2.353208 CCCGGAAGTTGAGAGAGAGTTG 60.353 54.545 0.73 0.00 0.00 3.16
2121 2253 2.333014 CGGAAGTTGAGAGAGAGTTGC 58.667 52.381 0.00 0.00 0.00 4.17
2122 2254 2.288457 CGGAAGTTGAGAGAGAGTTGCA 60.288 50.000 0.00 0.00 0.00 4.08
2123 2255 3.063485 GGAAGTTGAGAGAGAGTTGCAC 58.937 50.000 0.00 0.00 0.00 4.57
2124 2256 2.829741 AGTTGAGAGAGAGTTGCACC 57.170 50.000 0.00 0.00 0.00 5.01
2125 2257 2.324541 AGTTGAGAGAGAGTTGCACCT 58.675 47.619 0.00 0.00 0.00 4.00
2126 2258 2.298729 AGTTGAGAGAGAGTTGCACCTC 59.701 50.000 2.46 2.46 0.00 3.85
2127 2259 2.298729 GTTGAGAGAGAGTTGCACCTCT 59.701 50.000 14.36 14.36 44.44 3.69
2128 2260 2.603021 TGAGAGAGAGTTGCACCTCTT 58.397 47.619 15.62 5.53 41.85 2.85
2129 2261 2.968574 TGAGAGAGAGTTGCACCTCTTT 59.031 45.455 15.62 9.81 41.85 2.52
2130 2262 4.152647 TGAGAGAGAGTTGCACCTCTTTA 58.847 43.478 15.62 0.00 41.85 1.85
2131 2263 4.774726 TGAGAGAGAGTTGCACCTCTTTAT 59.225 41.667 15.62 6.95 41.85 1.40
2132 2264 5.952347 TGAGAGAGAGTTGCACCTCTTTATA 59.048 40.000 15.62 0.00 41.85 0.98
2133 2265 6.437477 TGAGAGAGAGTTGCACCTCTTTATAA 59.563 38.462 15.62 0.00 41.85 0.98
2134 2266 6.872920 AGAGAGAGTTGCACCTCTTTATAAG 58.127 40.000 15.62 0.00 41.85 1.73
2135 2267 5.983540 AGAGAGTTGCACCTCTTTATAAGG 58.016 41.667 15.62 0.00 41.85 2.69
2145 2277 6.228616 ACCTCTTTATAAGGTGAGCTCTTC 57.771 41.667 16.19 8.05 45.50 2.87
2146 2278 5.961421 ACCTCTTTATAAGGTGAGCTCTTCT 59.039 40.000 16.19 9.33 45.50 2.85
2147 2279 7.126733 ACCTCTTTATAAGGTGAGCTCTTCTA 58.873 38.462 16.19 1.75 45.50 2.10
2148 2280 7.068962 ACCTCTTTATAAGGTGAGCTCTTCTAC 59.931 40.741 16.19 4.19 45.50 2.59
2149 2281 7.349412 TCTTTATAAGGTGAGCTCTTCTACC 57.651 40.000 16.19 13.86 0.00 3.18
2150 2282 6.895756 TCTTTATAAGGTGAGCTCTTCTACCA 59.104 38.462 19.88 4.08 35.66 3.25
2151 2283 6.466885 TTATAAGGTGAGCTCTTCTACCAC 57.533 41.667 19.88 7.23 35.66 4.16
2152 2284 2.614134 AGGTGAGCTCTTCTACCACT 57.386 50.000 19.88 1.18 35.66 4.00
2153 2285 2.896039 AGGTGAGCTCTTCTACCACTT 58.104 47.619 19.88 1.52 35.66 3.16
2154 2286 2.564947 AGGTGAGCTCTTCTACCACTTG 59.435 50.000 19.88 0.00 35.66 3.16
2155 2287 2.300437 GGTGAGCTCTTCTACCACTTGT 59.700 50.000 16.19 0.00 33.42 3.16
2156 2288 3.510360 GGTGAGCTCTTCTACCACTTGTA 59.490 47.826 16.19 0.00 33.42 2.41
2157 2289 4.160626 GGTGAGCTCTTCTACCACTTGTAT 59.839 45.833 16.19 0.00 33.42 2.29
2158 2290 5.105752 GTGAGCTCTTCTACCACTTGTATG 58.894 45.833 16.19 0.00 0.00 2.39
2159 2291 5.016831 TGAGCTCTTCTACCACTTGTATGA 58.983 41.667 16.19 0.00 0.00 2.15
2160 2292 5.126222 TGAGCTCTTCTACCACTTGTATGAG 59.874 44.000 16.19 0.00 0.00 2.90
2161 2293 4.116238 GCTCTTCTACCACTTGTATGAGC 58.884 47.826 0.00 0.00 38.61 4.26
2162 2294 4.382040 GCTCTTCTACCACTTGTATGAGCA 60.382 45.833 0.00 0.00 41.54 4.26
2163 2295 5.683509 GCTCTTCTACCACTTGTATGAGCAT 60.684 44.000 0.00 0.00 41.54 3.79
2164 2296 5.664457 TCTTCTACCACTTGTATGAGCATG 58.336 41.667 0.00 0.00 0.00 4.06
2165 2297 5.422012 TCTTCTACCACTTGTATGAGCATGA 59.578 40.000 0.00 0.00 0.00 3.07
2166 2298 5.268118 TCTACCACTTGTATGAGCATGAG 57.732 43.478 0.00 0.00 0.00 2.90
2167 2299 4.956075 TCTACCACTTGTATGAGCATGAGA 59.044 41.667 0.00 0.00 0.00 3.27
2168 2300 4.558226 ACCACTTGTATGAGCATGAGAA 57.442 40.909 0.00 0.00 0.00 2.87
2169 2301 4.511527 ACCACTTGTATGAGCATGAGAAG 58.488 43.478 0.00 0.00 0.00 2.85
2170 2302 4.223700 ACCACTTGTATGAGCATGAGAAGA 59.776 41.667 0.00 0.00 0.00 2.87
2171 2303 4.809958 CCACTTGTATGAGCATGAGAAGAG 59.190 45.833 0.00 0.00 0.00 2.85
2172 2304 4.809958 CACTTGTATGAGCATGAGAAGAGG 59.190 45.833 0.00 0.00 0.00 3.69
2173 2305 4.713814 ACTTGTATGAGCATGAGAAGAGGA 59.286 41.667 0.00 0.00 0.00 3.71
2174 2306 4.933505 TGTATGAGCATGAGAAGAGGAG 57.066 45.455 0.00 0.00 0.00 3.69
2175 2307 4.540715 TGTATGAGCATGAGAAGAGGAGA 58.459 43.478 0.00 0.00 0.00 3.71
2176 2308 4.340666 TGTATGAGCATGAGAAGAGGAGAC 59.659 45.833 0.00 0.00 0.00 3.36
2177 2309 2.106566 TGAGCATGAGAAGAGGAGACC 58.893 52.381 0.00 0.00 0.00 3.85
2178 2310 2.292126 TGAGCATGAGAAGAGGAGACCT 60.292 50.000 0.00 0.00 36.03 3.85
2179 2311 3.053320 TGAGCATGAGAAGAGGAGACCTA 60.053 47.826 0.00 0.00 31.76 3.08
2180 2312 3.295973 AGCATGAGAAGAGGAGACCTAC 58.704 50.000 0.00 0.00 31.76 3.18
2181 2313 3.027412 GCATGAGAAGAGGAGACCTACA 58.973 50.000 0.00 0.00 31.76 2.74
2182 2314 3.181480 GCATGAGAAGAGGAGACCTACAC 60.181 52.174 0.00 0.00 31.76 2.90
2183 2315 2.712709 TGAGAAGAGGAGACCTACACG 58.287 52.381 0.00 0.00 31.76 4.49
2184 2316 1.402613 GAGAAGAGGAGACCTACACGC 59.597 57.143 0.00 0.00 31.76 5.34
2185 2317 0.099082 GAAGAGGAGACCTACACGCG 59.901 60.000 3.53 3.53 31.76 6.01
2186 2318 1.935327 AAGAGGAGACCTACACGCGC 61.935 60.000 5.73 0.00 31.76 6.86
2187 2319 3.736482 GAGGAGACCTACACGCGCG 62.736 68.421 30.96 30.96 31.76 6.86
2189 2321 4.477975 GAGACCTACACGCGCGCT 62.478 66.667 32.58 17.28 0.00 5.92
2190 2322 4.477975 AGACCTACACGCGCGCTC 62.478 66.667 32.58 17.73 0.00 5.03
2203 2335 3.591835 CGCTCCTCCTCCTCGCTC 61.592 72.222 0.00 0.00 0.00 5.03
2204 2336 3.591835 GCTCCTCCTCCTCGCTCG 61.592 72.222 0.00 0.00 0.00 5.03
2205 2337 3.591835 CTCCTCCTCCTCGCTCGC 61.592 72.222 0.00 0.00 0.00 5.03
2208 2340 3.591835 CTCCTCCTCGCTCGCCTC 61.592 72.222 0.00 0.00 0.00 4.70
2227 2359 4.337060 CCACGCCACGACTCGTCA 62.337 66.667 0.00 0.00 38.32 4.35
2228 2360 3.097728 CACGCCACGACTCGTCAC 61.098 66.667 0.00 0.00 38.32 3.67
2229 2361 4.678269 ACGCCACGACTCGTCACG 62.678 66.667 17.05 17.05 38.32 4.35
2230 2362 4.379143 CGCCACGACTCGTCACGA 62.379 66.667 14.62 0.00 38.32 4.35
2231 2363 2.799916 GCCACGACTCGTCACGAC 60.800 66.667 0.00 0.00 38.32 4.34
2254 2386 3.508840 GCGGGTTGCGGGATTGAG 61.509 66.667 0.00 0.00 0.00 3.02
2255 2387 3.508840 CGGGTTGCGGGATTGAGC 61.509 66.667 0.00 0.00 0.00 4.26
2256 2388 3.140814 GGGTTGCGGGATTGAGCC 61.141 66.667 0.00 0.00 0.00 4.70
2257 2389 2.361104 GGTTGCGGGATTGAGCCA 60.361 61.111 0.00 0.00 0.00 4.75
2258 2390 1.976474 GGTTGCGGGATTGAGCCAA 60.976 57.895 0.00 0.00 0.00 4.52
2259 2391 1.508088 GTTGCGGGATTGAGCCAAG 59.492 57.895 0.00 0.00 0.00 3.61
2260 2392 1.678635 TTGCGGGATTGAGCCAAGG 60.679 57.895 0.00 0.00 0.00 3.61
2261 2393 2.135903 TTGCGGGATTGAGCCAAGGA 62.136 55.000 0.00 0.00 0.00 3.36
2262 2394 2.115291 GCGGGATTGAGCCAAGGAC 61.115 63.158 0.00 0.00 0.00 3.85
2263 2395 1.299648 CGGGATTGAGCCAAGGACA 59.700 57.895 0.00 0.00 0.00 4.02
2264 2396 0.745845 CGGGATTGAGCCAAGGACAG 60.746 60.000 0.00 0.00 0.00 3.51
2265 2397 0.620556 GGGATTGAGCCAAGGACAGA 59.379 55.000 0.00 0.00 0.00 3.41
2266 2398 1.407989 GGGATTGAGCCAAGGACAGAG 60.408 57.143 0.00 0.00 0.00 3.35
2267 2399 1.377536 GATTGAGCCAAGGACAGAGC 58.622 55.000 0.00 0.00 0.00 4.09
2268 2400 0.990374 ATTGAGCCAAGGACAGAGCT 59.010 50.000 0.00 0.00 38.56 4.09
2269 2401 1.644509 TTGAGCCAAGGACAGAGCTA 58.355 50.000 0.00 0.00 35.23 3.32
2270 2402 1.871418 TGAGCCAAGGACAGAGCTAT 58.129 50.000 0.00 0.00 35.23 2.97
2271 2403 1.483827 TGAGCCAAGGACAGAGCTATG 59.516 52.381 6.84 6.84 35.23 2.23
2272 2404 0.179936 AGCCAAGGACAGAGCTATGC 59.820 55.000 8.60 1.04 32.73 3.14
2273 2405 0.107508 GCCAAGGACAGAGCTATGCA 60.108 55.000 8.60 0.00 0.00 3.96
2274 2406 1.661341 CCAAGGACAGAGCTATGCAC 58.339 55.000 8.60 1.13 0.00 4.57
2275 2407 1.284657 CAAGGACAGAGCTATGCACG 58.715 55.000 8.60 0.00 0.00 5.34
2276 2408 0.898320 AAGGACAGAGCTATGCACGT 59.102 50.000 8.60 1.94 0.00 4.49
2277 2409 0.898320 AGGACAGAGCTATGCACGTT 59.102 50.000 8.60 0.00 0.00 3.99
2278 2410 1.002366 GGACAGAGCTATGCACGTTG 58.998 55.000 8.60 0.00 0.00 4.10
2279 2411 1.673033 GGACAGAGCTATGCACGTTGT 60.673 52.381 8.60 0.00 0.00 3.32
2280 2412 1.656095 GACAGAGCTATGCACGTTGTC 59.344 52.381 8.60 0.00 0.00 3.18
2281 2413 1.273606 ACAGAGCTATGCACGTTGTCT 59.726 47.619 8.60 0.00 0.00 3.41
2282 2414 2.492088 ACAGAGCTATGCACGTTGTCTA 59.508 45.455 8.60 0.00 0.00 2.59
2283 2415 3.131223 ACAGAGCTATGCACGTTGTCTAT 59.869 43.478 8.60 0.00 0.00 1.98
2284 2416 4.338400 ACAGAGCTATGCACGTTGTCTATA 59.662 41.667 8.60 0.00 0.00 1.31
2285 2417 5.010112 ACAGAGCTATGCACGTTGTCTATAT 59.990 40.000 8.60 0.00 0.00 0.86
2286 2418 5.923114 CAGAGCTATGCACGTTGTCTATATT 59.077 40.000 0.00 0.00 0.00 1.28
2287 2419 6.422100 CAGAGCTATGCACGTTGTCTATATTT 59.578 38.462 0.00 0.00 0.00 1.40
2288 2420 6.986817 AGAGCTATGCACGTTGTCTATATTTT 59.013 34.615 0.00 0.00 0.00 1.82
2289 2421 7.495934 AGAGCTATGCACGTTGTCTATATTTTT 59.504 33.333 0.00 0.00 0.00 1.94
2290 2422 7.409697 AGCTATGCACGTTGTCTATATTTTTG 58.590 34.615 0.00 0.00 0.00 2.44
2291 2423 6.140737 GCTATGCACGTTGTCTATATTTTTGC 59.859 38.462 0.00 0.00 0.00 3.68
2292 2424 5.621197 TGCACGTTGTCTATATTTTTGCT 57.379 34.783 0.00 0.00 0.00 3.91
2293 2425 5.389778 TGCACGTTGTCTATATTTTTGCTG 58.610 37.500 0.00 0.00 0.00 4.41
2294 2426 4.262976 GCACGTTGTCTATATTTTTGCTGC 59.737 41.667 0.00 0.00 0.00 5.25
2295 2427 5.389778 CACGTTGTCTATATTTTTGCTGCA 58.610 37.500 0.00 0.00 0.00 4.41
2296 2428 6.029607 CACGTTGTCTATATTTTTGCTGCAT 58.970 36.000 1.84 0.00 0.00 3.96
2297 2429 6.021232 CACGTTGTCTATATTTTTGCTGCATG 60.021 38.462 1.84 0.00 0.00 4.06
2298 2430 5.456497 CGTTGTCTATATTTTTGCTGCATGG 59.544 40.000 1.84 0.00 0.00 3.66
2299 2431 5.518848 TGTCTATATTTTTGCTGCATGGG 57.481 39.130 1.84 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.963129 GTGGGAAATTGATCCTACACCA 58.037 45.455 7.59 0.00 46.88 4.17
23 24 1.877443 CGGTTCGTTCAGTGGGAAATT 59.123 47.619 0.00 0.00 37.23 1.82
45 46 4.794981 GCGTCCATAACCTAATCGACATCA 60.795 45.833 0.00 0.00 0.00 3.07
54 55 1.184431 TCCGTGCGTCCATAACCTAA 58.816 50.000 0.00 0.00 0.00 2.69
202 203 7.187824 AGTTCAGATTTTGCATCCTCTACTA 57.812 36.000 0.00 0.00 0.00 1.82
205 206 6.946340 TGTAGTTCAGATTTTGCATCCTCTA 58.054 36.000 0.00 0.00 0.00 2.43
213 214 7.959651 CAGTTGTAGATGTAGTTCAGATTTTGC 59.040 37.037 0.00 0.00 0.00 3.68
295 296 2.317040 ACTCCTGAAGGTCTCGACAAA 58.683 47.619 0.00 0.00 36.34 2.83
315 316 2.609747 CTATCTTGTAGCAGCCCCCTA 58.390 52.381 0.00 0.00 0.00 3.53
361 362 3.286404 CATGGAGGAACATGGCCAA 57.714 52.632 10.96 0.00 43.44 4.52
641 654 4.122046 GCAATCCTAAAAATGGCATCACC 58.878 43.478 0.00 0.00 39.84 4.02
671 684 6.051717 GCACTGACATGAGTACCATCTATTT 58.948 40.000 0.00 0.00 31.94 1.40
692 705 1.066787 GTGACCTAGGAACTCTGGCAC 60.067 57.143 17.98 0.00 41.75 5.01
737 751 3.141398 CACATTCTGGCTTGTGTAGTGT 58.859 45.455 0.00 0.00 38.69 3.55
821 835 5.583854 GTCAGTGAGAATGTTAGCATCATGT 59.416 40.000 0.00 0.00 33.50 3.21
865 879 2.092323 TGACGTCGAGGATGTTGATCT 58.908 47.619 12.85 0.00 31.35 2.75
907 921 2.108976 CCGGCCGACATGCATAGT 59.891 61.111 30.73 0.00 0.00 2.12
1022 1065 6.814954 ACCTATTCTTCAGAGCTCCAAATA 57.185 37.500 10.93 6.85 0.00 1.40
1186 1229 0.037590 TGGCCGGAGCTAACAACATT 59.962 50.000 5.05 0.00 39.73 2.71
1247 1290 0.250295 CGCCTCTTTCCACTCCAACA 60.250 55.000 0.00 0.00 0.00 3.33
1258 1301 2.489938 TTAAGCCACATCGCCTCTTT 57.510 45.000 0.00 0.00 0.00 2.52
1259 1303 2.717639 ATTAAGCCACATCGCCTCTT 57.282 45.000 0.00 0.00 0.00 2.85
1385 1502 3.226777 TGCTACTAGATCTGCCTCTTCC 58.773 50.000 5.18 0.00 0.00 3.46
1386 1503 3.305335 GCTGCTACTAGATCTGCCTCTTC 60.305 52.174 5.18 0.00 0.00 2.87
1387 1504 2.627699 GCTGCTACTAGATCTGCCTCTT 59.372 50.000 5.18 0.00 0.00 2.85
1388 1505 2.238521 GCTGCTACTAGATCTGCCTCT 58.761 52.381 5.18 0.00 0.00 3.69
1389 1506 1.959985 TGCTGCTACTAGATCTGCCTC 59.040 52.381 5.18 0.00 0.00 4.70
1390 1507 2.079170 TGCTGCTACTAGATCTGCCT 57.921 50.000 5.18 0.00 0.00 4.75
1391 1508 2.159043 TGTTGCTGCTACTAGATCTGCC 60.159 50.000 14.81 0.00 0.00 4.85
1392 1509 2.863137 GTGTTGCTGCTACTAGATCTGC 59.137 50.000 14.81 0.00 0.00 4.26
1393 1510 3.452474 GGTGTTGCTGCTACTAGATCTG 58.548 50.000 14.81 0.00 0.00 2.90
1394 1511 2.099921 CGGTGTTGCTGCTACTAGATCT 59.900 50.000 14.81 0.00 0.00 2.75
1395 1512 2.099263 TCGGTGTTGCTGCTACTAGATC 59.901 50.000 14.81 0.00 0.00 2.75
1396 1513 2.100197 TCGGTGTTGCTGCTACTAGAT 58.900 47.619 14.81 0.00 0.00 1.98
1484 1607 7.624360 CCATCTACTTAAACAAATGGCAGTA 57.376 36.000 0.00 0.00 0.00 2.74
1489 1612 4.096382 AGCGCCATCTACTTAAACAAATGG 59.904 41.667 2.29 0.00 37.34 3.16
1614 1739 1.300542 CGTTTGGTTGCCCGCATTT 60.301 52.632 0.00 0.00 0.00 2.32
1679 1804 8.579850 AAAAATCCTAGATGCACATAGTTTGA 57.420 30.769 0.00 0.00 0.00 2.69
1744 1876 2.286713 CGACGAGTCTGGCTCTATTGAG 60.287 54.545 7.78 0.00 41.98 3.02
1745 1877 1.671328 CGACGAGTCTGGCTCTATTGA 59.329 52.381 7.78 0.00 41.98 2.57
1746 1878 1.268794 CCGACGAGTCTGGCTCTATTG 60.269 57.143 7.78 0.00 41.98 1.90
1747 1879 1.025812 CCGACGAGTCTGGCTCTATT 58.974 55.000 7.78 0.00 41.98 1.73
1748 1880 0.820074 CCCGACGAGTCTGGCTCTAT 60.820 60.000 7.78 0.00 41.98 1.98
1749 1881 1.451567 CCCGACGAGTCTGGCTCTA 60.452 63.158 7.78 0.00 41.98 2.43
1750 1882 2.752238 CCCGACGAGTCTGGCTCT 60.752 66.667 7.78 0.00 41.98 4.09
1754 1886 4.135153 CTGGCCCGACGAGTCTGG 62.135 72.222 0.00 9.00 37.09 3.86
1811 1943 0.755327 AAAACAGGAGCACCCACCAC 60.755 55.000 0.00 0.00 37.41 4.16
1812 1944 0.032615 AAAAACAGGAGCACCCACCA 60.033 50.000 0.00 0.00 37.41 4.17
1817 1949 2.155279 GAGGAGAAAAACAGGAGCACC 58.845 52.381 0.00 0.00 0.00 5.01
1818 1950 3.070748 GAGAGGAGAAAAACAGGAGCAC 58.929 50.000 0.00 0.00 0.00 4.40
1819 1951 2.705658 TGAGAGGAGAAAAACAGGAGCA 59.294 45.455 0.00 0.00 0.00 4.26
1820 1952 3.409026 TGAGAGGAGAAAAACAGGAGC 57.591 47.619 0.00 0.00 0.00 4.70
1821 1953 5.419239 AGATGAGAGGAGAAAAACAGGAG 57.581 43.478 0.00 0.00 0.00 3.69
1822 1954 5.780282 TGTAGATGAGAGGAGAAAAACAGGA 59.220 40.000 0.00 0.00 0.00 3.86
1823 1955 5.872070 GTGTAGATGAGAGGAGAAAAACAGG 59.128 44.000 0.00 0.00 0.00 4.00
1824 1956 5.574830 CGTGTAGATGAGAGGAGAAAAACAG 59.425 44.000 0.00 0.00 0.00 3.16
1825 1957 5.010719 ACGTGTAGATGAGAGGAGAAAAACA 59.989 40.000 0.00 0.00 0.00 2.83
1826 1958 5.346281 CACGTGTAGATGAGAGGAGAAAAAC 59.654 44.000 7.58 0.00 0.00 2.43
1827 1959 5.243060 TCACGTGTAGATGAGAGGAGAAAAA 59.757 40.000 16.51 0.00 0.00 1.94
1828 1960 4.765339 TCACGTGTAGATGAGAGGAGAAAA 59.235 41.667 16.51 0.00 0.00 2.29
1829 1961 4.156190 GTCACGTGTAGATGAGAGGAGAAA 59.844 45.833 16.51 0.00 0.00 2.52
1830 1962 3.690139 GTCACGTGTAGATGAGAGGAGAA 59.310 47.826 16.51 0.00 0.00 2.87
1831 1963 3.271729 GTCACGTGTAGATGAGAGGAGA 58.728 50.000 16.51 0.00 0.00 3.71
1832 1964 2.356382 GGTCACGTGTAGATGAGAGGAG 59.644 54.545 16.51 0.00 0.00 3.69
1833 1965 2.290705 TGGTCACGTGTAGATGAGAGGA 60.291 50.000 16.51 0.00 0.00 3.71
1834 1966 2.092323 TGGTCACGTGTAGATGAGAGG 58.908 52.381 16.51 0.00 0.00 3.69
1835 1967 2.488153 TGTGGTCACGTGTAGATGAGAG 59.512 50.000 16.51 0.00 0.00 3.20
1836 1968 2.510613 TGTGGTCACGTGTAGATGAGA 58.489 47.619 16.51 0.00 0.00 3.27
1837 1969 3.119495 TGATGTGGTCACGTGTAGATGAG 60.119 47.826 16.51 0.00 0.00 2.90
1838 1970 2.823154 TGATGTGGTCACGTGTAGATGA 59.177 45.455 16.51 0.00 0.00 2.92
1839 1971 3.230743 TGATGTGGTCACGTGTAGATG 57.769 47.619 16.51 0.00 0.00 2.90
1840 1972 4.471904 AATGATGTGGTCACGTGTAGAT 57.528 40.909 16.51 7.44 40.28 1.98
1841 1973 3.953712 AATGATGTGGTCACGTGTAGA 57.046 42.857 16.51 2.55 40.28 2.59
1842 1974 3.125146 CCAAATGATGTGGTCACGTGTAG 59.875 47.826 16.51 0.00 40.28 2.74
1843 1975 3.070748 CCAAATGATGTGGTCACGTGTA 58.929 45.455 16.51 0.00 40.28 2.90
1844 1976 1.879380 CCAAATGATGTGGTCACGTGT 59.121 47.619 16.51 0.00 40.28 4.49
1845 1977 1.879380 ACCAAATGATGTGGTCACGTG 59.121 47.619 9.94 9.94 46.79 4.49
1846 1978 2.270352 ACCAAATGATGTGGTCACGT 57.730 45.000 0.18 0.00 46.79 4.49
1864 1996 2.198304 AATGGAAGTGGGCGGGAGAC 62.198 60.000 0.00 0.00 0.00 3.36
1865 1997 1.497309 AAATGGAAGTGGGCGGGAGA 61.497 55.000 0.00 0.00 0.00 3.71
1866 1998 0.611896 AAAATGGAAGTGGGCGGGAG 60.612 55.000 0.00 0.00 0.00 4.30
1867 1999 0.610785 GAAAATGGAAGTGGGCGGGA 60.611 55.000 0.00 0.00 0.00 5.14
1868 2000 1.604147 GGAAAATGGAAGTGGGCGGG 61.604 60.000 0.00 0.00 0.00 6.13
1869 2001 0.897863 TGGAAAATGGAAGTGGGCGG 60.898 55.000 0.00 0.00 0.00 6.13
1870 2002 0.965439 TTGGAAAATGGAAGTGGGCG 59.035 50.000 0.00 0.00 0.00 6.13
1871 2003 1.691434 TGTTGGAAAATGGAAGTGGGC 59.309 47.619 0.00 0.00 0.00 5.36
1872 2004 2.299867 CCTGTTGGAAAATGGAAGTGGG 59.700 50.000 0.00 0.00 34.57 4.61
1873 2005 3.230134 TCCTGTTGGAAAATGGAAGTGG 58.770 45.455 0.00 0.00 39.87 4.00
1874 2006 3.305608 GCTCCTGTTGGAAAATGGAAGTG 60.306 47.826 0.00 0.00 42.66 3.16
1875 2007 2.893489 GCTCCTGTTGGAAAATGGAAGT 59.107 45.455 0.00 0.00 42.66 3.01
1876 2008 2.095059 CGCTCCTGTTGGAAAATGGAAG 60.095 50.000 0.00 0.00 42.66 3.46
1877 2009 1.885887 CGCTCCTGTTGGAAAATGGAA 59.114 47.619 0.00 0.00 42.66 3.53
1878 2010 1.073125 TCGCTCCTGTTGGAAAATGGA 59.927 47.619 0.00 0.00 42.66 3.41
1879 2011 1.200020 GTCGCTCCTGTTGGAAAATGG 59.800 52.381 0.00 0.00 42.66 3.16
1880 2012 1.135972 CGTCGCTCCTGTTGGAAAATG 60.136 52.381 0.00 0.00 42.66 2.32
1881 2013 1.156736 CGTCGCTCCTGTTGGAAAAT 58.843 50.000 0.00 0.00 42.66 1.82
1882 2014 1.503818 GCGTCGCTCCTGTTGGAAAA 61.504 55.000 10.68 0.00 42.66 2.29
1883 2015 1.959226 GCGTCGCTCCTGTTGGAAA 60.959 57.895 10.68 0.00 42.66 3.13
1884 2016 2.357034 GCGTCGCTCCTGTTGGAA 60.357 61.111 10.68 0.00 42.66 3.53
1885 2017 3.303135 AGCGTCGCTCCTGTTGGA 61.303 61.111 15.47 0.00 40.69 3.53
1894 2026 1.658686 CTGGACTAAGGAGCGTCGCT 61.659 60.000 21.92 21.92 43.88 4.93
1895 2027 1.226717 CTGGACTAAGGAGCGTCGC 60.227 63.158 9.80 9.80 0.00 5.19
1896 2028 1.002251 GATCTGGACTAAGGAGCGTCG 60.002 57.143 0.00 0.00 0.00 5.12
1897 2029 1.002251 CGATCTGGACTAAGGAGCGTC 60.002 57.143 0.00 0.00 34.78 5.19
1898 2030 1.025812 CGATCTGGACTAAGGAGCGT 58.974 55.000 0.00 0.00 34.78 5.07
1899 2031 0.312416 CCGATCTGGACTAAGGAGCG 59.688 60.000 0.00 0.00 42.00 5.03
1900 2032 0.676736 CCCGATCTGGACTAAGGAGC 59.323 60.000 0.00 0.00 42.00 4.70
1901 2033 2.235016 CTCCCGATCTGGACTAAGGAG 58.765 57.143 1.02 0.00 42.00 3.69
1902 2034 1.133450 CCTCCCGATCTGGACTAAGGA 60.133 57.143 1.02 0.00 42.00 3.36
1903 2035 1.333177 CCTCCCGATCTGGACTAAGG 58.667 60.000 1.02 0.00 42.00 2.69
1904 2036 1.333177 CCCTCCCGATCTGGACTAAG 58.667 60.000 1.02 0.00 42.00 2.18
1905 2037 0.759436 GCCCTCCCGATCTGGACTAA 60.759 60.000 1.02 0.00 42.00 2.24
1906 2038 1.152525 GCCCTCCCGATCTGGACTA 60.153 63.158 1.02 0.00 42.00 2.59
1907 2039 2.444895 GCCCTCCCGATCTGGACT 60.445 66.667 1.02 0.00 42.00 3.85
1908 2040 2.764128 TGCCCTCCCGATCTGGAC 60.764 66.667 1.02 0.00 42.00 4.02
1909 2041 2.444706 CTGCCCTCCCGATCTGGA 60.445 66.667 5.67 5.67 42.00 3.86
1910 2042 2.444706 TCTGCCCTCCCGATCTGG 60.445 66.667 0.00 0.00 37.55 3.86
1911 2043 2.506061 CCTCTGCCCTCCCGATCTG 61.506 68.421 0.00 0.00 0.00 2.90
1912 2044 2.123077 CCTCTGCCCTCCCGATCT 60.123 66.667 0.00 0.00 0.00 2.75
1913 2045 2.123251 TCCTCTGCCCTCCCGATC 60.123 66.667 0.00 0.00 0.00 3.69
1914 2046 2.444895 GTCCTCTGCCCTCCCGAT 60.445 66.667 0.00 0.00 0.00 4.18
1915 2047 3.663815 GAGTCCTCTGCCCTCCCGA 62.664 68.421 0.00 0.00 0.00 5.14
1916 2048 3.151022 GAGTCCTCTGCCCTCCCG 61.151 72.222 0.00 0.00 0.00 5.14
1917 2049 2.366570 AGAGTCCTCTGCCCTCCC 59.633 66.667 0.00 0.00 38.75 4.30
1925 2057 2.681778 CACCGGGCAGAGTCCTCT 60.682 66.667 6.32 0.00 41.37 3.69
1926 2058 2.680352 TCACCGGGCAGAGTCCTC 60.680 66.667 6.32 0.00 0.00 3.71
1927 2059 2.997897 GTCACCGGGCAGAGTCCT 60.998 66.667 6.32 0.00 0.00 3.85
1928 2060 4.436998 CGTCACCGGGCAGAGTCC 62.437 72.222 6.32 0.00 0.00 3.85
1938 2070 2.038269 CCCCATCAAACCGTCACCG 61.038 63.158 0.00 0.00 0.00 4.94
1939 2071 2.340328 GCCCCATCAAACCGTCACC 61.340 63.158 0.00 0.00 0.00 4.02
1940 2072 0.965363 ATGCCCCATCAAACCGTCAC 60.965 55.000 0.00 0.00 0.00 3.67
1941 2073 0.251564 AATGCCCCATCAAACCGTCA 60.252 50.000 0.00 0.00 0.00 4.35
1942 2074 0.173255 CAATGCCCCATCAAACCGTC 59.827 55.000 0.00 0.00 0.00 4.79
1943 2075 1.257055 CCAATGCCCCATCAAACCGT 61.257 55.000 0.00 0.00 0.00 4.83
1944 2076 0.969917 TCCAATGCCCCATCAAACCG 60.970 55.000 0.00 0.00 0.00 4.44
1945 2077 0.826062 CTCCAATGCCCCATCAAACC 59.174 55.000 0.00 0.00 0.00 3.27
1946 2078 0.826062 CCTCCAATGCCCCATCAAAC 59.174 55.000 0.00 0.00 0.00 2.93
1947 2079 0.977108 GCCTCCAATGCCCCATCAAA 60.977 55.000 0.00 0.00 0.00 2.69
1948 2080 1.381599 GCCTCCAATGCCCCATCAA 60.382 57.895 0.00 0.00 0.00 2.57
1949 2081 1.951923 ATGCCTCCAATGCCCCATCA 61.952 55.000 0.00 0.00 0.00 3.07
1950 2082 1.152398 ATGCCTCCAATGCCCCATC 60.152 57.895 0.00 0.00 0.00 3.51
1951 2083 1.458777 CATGCCTCCAATGCCCCAT 60.459 57.895 0.00 0.00 0.00 4.00
1952 2084 2.042741 CATGCCTCCAATGCCCCA 60.043 61.111 0.00 0.00 0.00 4.96
1953 2085 2.841044 CCATGCCTCCAATGCCCC 60.841 66.667 0.00 0.00 0.00 5.80
1954 2086 2.042639 ACCATGCCTCCAATGCCC 60.043 61.111 0.00 0.00 0.00 5.36
1955 2087 1.076485 AGACCATGCCTCCAATGCC 60.076 57.895 0.00 0.00 0.00 4.40
1956 2088 1.389609 CCAGACCATGCCTCCAATGC 61.390 60.000 0.00 0.00 0.00 3.56
1957 2089 0.033796 ACCAGACCATGCCTCCAATG 60.034 55.000 0.00 0.00 0.00 2.82
1958 2090 0.033796 CACCAGACCATGCCTCCAAT 60.034 55.000 0.00 0.00 0.00 3.16
1959 2091 1.379916 CACCAGACCATGCCTCCAA 59.620 57.895 0.00 0.00 0.00 3.53
1960 2092 2.605607 CCACCAGACCATGCCTCCA 61.606 63.158 0.00 0.00 0.00 3.86
1961 2093 2.142292 AACCACCAGACCATGCCTCC 62.142 60.000 0.00 0.00 0.00 4.30
1962 2094 0.251341 AAACCACCAGACCATGCCTC 60.251 55.000 0.00 0.00 0.00 4.70
1963 2095 0.251341 GAAACCACCAGACCATGCCT 60.251 55.000 0.00 0.00 0.00 4.75
1964 2096 0.251341 AGAAACCACCAGACCATGCC 60.251 55.000 0.00 0.00 0.00 4.40
1965 2097 0.883833 CAGAAACCACCAGACCATGC 59.116 55.000 0.00 0.00 0.00 4.06
1966 2098 2.276732 ACAGAAACCACCAGACCATG 57.723 50.000 0.00 0.00 0.00 3.66
1967 2099 2.586425 CAACAGAAACCACCAGACCAT 58.414 47.619 0.00 0.00 0.00 3.55
1968 2100 1.409521 CCAACAGAAACCACCAGACCA 60.410 52.381 0.00 0.00 0.00 4.02
1969 2101 1.133915 TCCAACAGAAACCACCAGACC 60.134 52.381 0.00 0.00 0.00 3.85
1970 2102 2.341846 TCCAACAGAAACCACCAGAC 57.658 50.000 0.00 0.00 0.00 3.51
1971 2103 3.593442 ATTCCAACAGAAACCACCAGA 57.407 42.857 0.00 0.00 38.21 3.86
1972 2104 4.670896 AAATTCCAACAGAAACCACCAG 57.329 40.909 0.00 0.00 38.21 4.00
1973 2105 4.764172 CAAAATTCCAACAGAAACCACCA 58.236 39.130 0.00 0.00 38.21 4.17
1974 2106 3.559655 GCAAAATTCCAACAGAAACCACC 59.440 43.478 0.00 0.00 38.21 4.61
1975 2107 4.441792 AGCAAAATTCCAACAGAAACCAC 58.558 39.130 0.00 0.00 38.21 4.16
1976 2108 4.751767 AGCAAAATTCCAACAGAAACCA 57.248 36.364 0.00 0.00 38.21 3.67
1977 2109 5.842907 ACTAGCAAAATTCCAACAGAAACC 58.157 37.500 0.00 0.00 38.21 3.27
1978 2110 7.084486 CCTACTAGCAAAATTCCAACAGAAAC 58.916 38.462 0.00 0.00 38.21 2.78
1979 2111 6.294508 GCCTACTAGCAAAATTCCAACAGAAA 60.295 38.462 0.00 0.00 38.21 2.52
1980 2112 5.183140 GCCTACTAGCAAAATTCCAACAGAA 59.817 40.000 0.00 0.00 39.32 3.02
1981 2113 4.700213 GCCTACTAGCAAAATTCCAACAGA 59.300 41.667 0.00 0.00 0.00 3.41
1982 2114 4.142381 GGCCTACTAGCAAAATTCCAACAG 60.142 45.833 0.00 0.00 0.00 3.16
1983 2115 3.761752 GGCCTACTAGCAAAATTCCAACA 59.238 43.478 0.00 0.00 0.00 3.33
1984 2116 4.017126 AGGCCTACTAGCAAAATTCCAAC 58.983 43.478 1.29 0.00 0.00 3.77
1985 2117 4.316025 AGGCCTACTAGCAAAATTCCAA 57.684 40.909 1.29 0.00 0.00 3.53
1986 2118 4.316025 AAGGCCTACTAGCAAAATTCCA 57.684 40.909 5.16 0.00 0.00 3.53
1987 2119 4.142160 CCAAAGGCCTACTAGCAAAATTCC 60.142 45.833 5.16 0.00 0.00 3.01
1988 2120 4.678044 GCCAAAGGCCTACTAGCAAAATTC 60.678 45.833 5.16 0.00 44.06 2.17
1989 2121 3.195610 GCCAAAGGCCTACTAGCAAAATT 59.804 43.478 5.16 0.00 44.06 1.82
1990 2122 2.760650 GCCAAAGGCCTACTAGCAAAAT 59.239 45.455 5.16 0.00 44.06 1.82
1991 2123 2.167662 GCCAAAGGCCTACTAGCAAAA 58.832 47.619 5.16 0.00 44.06 2.44
1992 2124 1.834188 GCCAAAGGCCTACTAGCAAA 58.166 50.000 5.16 0.00 44.06 3.68
1993 2125 3.569873 GCCAAAGGCCTACTAGCAA 57.430 52.632 5.16 0.00 44.06 3.91
2010 2142 3.007940 AGAATTTTAGTTGGGCTTTGGGC 59.992 43.478 0.00 0.00 40.90 5.36
2011 2143 4.283212 TCAGAATTTTAGTTGGGCTTTGGG 59.717 41.667 0.00 0.00 0.00 4.12
2012 2144 5.467035 TCAGAATTTTAGTTGGGCTTTGG 57.533 39.130 0.00 0.00 0.00 3.28
2013 2145 7.967890 ATTTCAGAATTTTAGTTGGGCTTTG 57.032 32.000 0.00 0.00 0.00 2.77
2014 2146 8.432013 AGAATTTCAGAATTTTAGTTGGGCTTT 58.568 29.630 0.00 0.00 35.65 3.51
2015 2147 7.966812 AGAATTTCAGAATTTTAGTTGGGCTT 58.033 30.769 0.00 0.00 35.65 4.35
2016 2148 7.452813 AGAGAATTTCAGAATTTTAGTTGGGCT 59.547 33.333 0.00 0.00 35.65 5.19
2017 2149 7.606349 AGAGAATTTCAGAATTTTAGTTGGGC 58.394 34.615 0.00 0.00 35.65 5.36
2018 2150 9.415544 CAAGAGAATTTCAGAATTTTAGTTGGG 57.584 33.333 0.00 0.00 35.65 4.12
2019 2151 9.415544 CCAAGAGAATTTCAGAATTTTAGTTGG 57.584 33.333 0.00 9.41 35.65 3.77
2020 2152 8.919661 GCCAAGAGAATTTCAGAATTTTAGTTG 58.080 33.333 0.00 0.00 35.65 3.16
2021 2153 8.090831 GGCCAAGAGAATTTCAGAATTTTAGTT 58.909 33.333 0.00 0.00 35.65 2.24
2022 2154 7.310052 GGGCCAAGAGAATTTCAGAATTTTAGT 60.310 37.037 4.39 0.00 35.65 2.24
2023 2155 7.038048 GGGCCAAGAGAATTTCAGAATTTTAG 58.962 38.462 4.39 0.00 35.65 1.85
2024 2156 6.496565 TGGGCCAAGAGAATTTCAGAATTTTA 59.503 34.615 2.13 0.00 35.65 1.52
2025 2157 5.307716 TGGGCCAAGAGAATTTCAGAATTTT 59.692 36.000 2.13 0.00 35.65 1.82
2026 2158 4.840115 TGGGCCAAGAGAATTTCAGAATTT 59.160 37.500 2.13 0.00 35.65 1.82
2027 2159 4.419282 TGGGCCAAGAGAATTTCAGAATT 58.581 39.130 2.13 0.00 38.16 2.17
2028 2160 4.051661 TGGGCCAAGAGAATTTCAGAAT 57.948 40.909 2.13 0.00 0.00 2.40
2029 2161 3.524095 TGGGCCAAGAGAATTTCAGAA 57.476 42.857 2.13 0.00 0.00 3.02
2030 2162 3.744940 ATGGGCCAAGAGAATTTCAGA 57.255 42.857 11.89 0.00 0.00 3.27
2031 2163 3.765511 TGAATGGGCCAAGAGAATTTCAG 59.234 43.478 11.89 0.00 0.00 3.02
2032 2164 3.777087 TGAATGGGCCAAGAGAATTTCA 58.223 40.909 11.89 11.58 0.00 2.69
2033 2165 4.690122 CATGAATGGGCCAAGAGAATTTC 58.310 43.478 11.89 8.70 0.00 2.17
2034 2166 3.118519 GCATGAATGGGCCAAGAGAATTT 60.119 43.478 11.89 0.00 0.00 1.82
2035 2167 2.433239 GCATGAATGGGCCAAGAGAATT 59.567 45.455 11.89 0.00 0.00 2.17
2036 2168 2.037144 GCATGAATGGGCCAAGAGAAT 58.963 47.619 11.89 0.00 0.00 2.40
2037 2169 1.272592 TGCATGAATGGGCCAAGAGAA 60.273 47.619 11.89 0.00 0.00 2.87
2038 2170 0.332293 TGCATGAATGGGCCAAGAGA 59.668 50.000 11.89 0.00 0.00 3.10
2039 2171 0.458669 GTGCATGAATGGGCCAAGAG 59.541 55.000 11.89 0.00 0.00 2.85
2040 2172 0.251698 TGTGCATGAATGGGCCAAGA 60.252 50.000 11.89 0.00 0.00 3.02
2041 2173 0.108520 GTGTGCATGAATGGGCCAAG 60.109 55.000 11.89 0.00 0.00 3.61
2042 2174 0.830866 TGTGTGCATGAATGGGCCAA 60.831 50.000 11.89 0.00 0.00 4.52
2043 2175 0.615261 ATGTGTGCATGAATGGGCCA 60.615 50.000 9.61 9.61 33.37 5.36
2044 2176 2.204748 ATGTGTGCATGAATGGGCC 58.795 52.632 0.00 0.00 33.37 5.80
2053 2185 1.072806 ACTCCACTCACATGTGTGCAT 59.927 47.619 24.63 5.52 45.25 3.96
2054 2186 0.469494 ACTCCACTCACATGTGTGCA 59.531 50.000 24.63 5.64 45.25 4.57
2055 2187 0.870393 CACTCCACTCACATGTGTGC 59.130 55.000 24.63 0.00 45.25 4.57
2056 2188 2.224137 ACTCACTCCACTCACATGTGTG 60.224 50.000 24.63 23.70 46.91 3.82
2057 2189 2.042464 ACTCACTCCACTCACATGTGT 58.958 47.619 24.63 4.31 36.30 3.72
2058 2190 2.036346 TCACTCACTCCACTCACATGTG 59.964 50.000 20.18 20.18 37.66 3.21
2059 2191 2.298446 CTCACTCACTCCACTCACATGT 59.702 50.000 0.00 0.00 0.00 3.21
2060 2192 2.353505 CCTCACTCACTCCACTCACATG 60.354 54.545 0.00 0.00 0.00 3.21
2061 2193 1.898472 CCTCACTCACTCCACTCACAT 59.102 52.381 0.00 0.00 0.00 3.21
2062 2194 1.332195 CCTCACTCACTCCACTCACA 58.668 55.000 0.00 0.00 0.00 3.58
2063 2195 0.037790 GCCTCACTCACTCCACTCAC 60.038 60.000 0.00 0.00 0.00 3.51
2064 2196 0.178950 AGCCTCACTCACTCCACTCA 60.179 55.000 0.00 0.00 0.00 3.41
2065 2197 1.840737 TAGCCTCACTCACTCCACTC 58.159 55.000 0.00 0.00 0.00 3.51
2066 2198 2.310779 TTAGCCTCACTCACTCCACT 57.689 50.000 0.00 0.00 0.00 4.00
2067 2199 2.300437 ACTTTAGCCTCACTCACTCCAC 59.700 50.000 0.00 0.00 0.00 4.02
2068 2200 2.609747 ACTTTAGCCTCACTCACTCCA 58.390 47.619 0.00 0.00 0.00 3.86
2069 2201 3.686916 AACTTTAGCCTCACTCACTCC 57.313 47.619 0.00 0.00 0.00 3.85
2070 2202 5.785243 ACTAAACTTTAGCCTCACTCACTC 58.215 41.667 8.26 0.00 0.00 3.51
2071 2203 5.279556 GGACTAAACTTTAGCCTCACTCACT 60.280 44.000 8.26 0.00 0.00 3.41
2072 2204 4.930405 GGACTAAACTTTAGCCTCACTCAC 59.070 45.833 8.26 0.00 0.00 3.51
2073 2205 4.020485 GGGACTAAACTTTAGCCTCACTCA 60.020 45.833 8.26 0.00 0.00 3.41
2074 2206 4.020485 TGGGACTAAACTTTAGCCTCACTC 60.020 45.833 8.26 0.00 0.00 3.51
2075 2207 3.908103 TGGGACTAAACTTTAGCCTCACT 59.092 43.478 8.26 0.00 0.00 3.41
2076 2208 4.001652 GTGGGACTAAACTTTAGCCTCAC 58.998 47.826 10.94 10.94 0.00 3.51
2077 2209 3.008704 GGTGGGACTAAACTTTAGCCTCA 59.991 47.826 8.26 1.26 0.00 3.86
2078 2210 3.607741 GGTGGGACTAAACTTTAGCCTC 58.392 50.000 8.26 0.00 0.00 4.70
2079 2211 2.307980 GGGTGGGACTAAACTTTAGCCT 59.692 50.000 8.26 0.00 0.00 4.58
2080 2212 2.619849 GGGGTGGGACTAAACTTTAGCC 60.620 54.545 8.26 9.85 0.00 3.93
2081 2213 2.719739 GGGGTGGGACTAAACTTTAGC 58.280 52.381 8.26 2.49 0.00 3.09
2082 2214 2.355412 CCGGGGTGGGACTAAACTTTAG 60.355 54.545 6.96 6.96 0.00 1.85
2083 2215 1.629861 CCGGGGTGGGACTAAACTTTA 59.370 52.381 0.00 0.00 0.00 1.85
2084 2216 0.402887 CCGGGGTGGGACTAAACTTT 59.597 55.000 0.00 0.00 0.00 2.66
2085 2217 0.474273 TCCGGGGTGGGACTAAACTT 60.474 55.000 0.00 0.00 38.76 2.66
2086 2218 0.474273 TTCCGGGGTGGGACTAAACT 60.474 55.000 0.00 0.00 38.76 2.66
2087 2219 0.035725 CTTCCGGGGTGGGACTAAAC 60.036 60.000 0.00 0.00 38.76 2.01
2088 2220 0.474273 ACTTCCGGGGTGGGACTAAA 60.474 55.000 0.00 0.00 38.76 1.85
2089 2221 0.474273 AACTTCCGGGGTGGGACTAA 60.474 55.000 0.00 0.00 38.76 2.24
2090 2222 1.159184 AACTTCCGGGGTGGGACTA 59.841 57.895 0.00 0.00 38.76 2.59
2091 2223 2.122099 AACTTCCGGGGTGGGACT 60.122 61.111 0.00 0.00 38.76 3.85
2092 2224 2.033602 CAACTTCCGGGGTGGGAC 59.966 66.667 0.00 0.00 38.76 4.46
2093 2225 2.122324 TCAACTTCCGGGGTGGGA 60.122 61.111 0.00 0.56 38.76 4.37
2094 2226 2.185310 CTCTCAACTTCCGGGGTGGG 62.185 65.000 0.00 0.00 38.76 4.61
2095 2227 1.192146 TCTCTCAACTTCCGGGGTGG 61.192 60.000 0.00 0.00 40.09 4.61
2096 2228 0.247736 CTCTCTCAACTTCCGGGGTG 59.752 60.000 0.00 0.00 0.00 4.61
2097 2229 0.114560 TCTCTCTCAACTTCCGGGGT 59.885 55.000 0.00 0.00 0.00 4.95
2098 2230 0.820871 CTCTCTCTCAACTTCCGGGG 59.179 60.000 0.00 0.00 0.00 5.73
2099 2231 1.551452 ACTCTCTCTCAACTTCCGGG 58.449 55.000 0.00 0.00 0.00 5.73
2100 2232 2.928731 GCAACTCTCTCTCAACTTCCGG 60.929 54.545 0.00 0.00 0.00 5.14
2101 2233 2.288457 TGCAACTCTCTCTCAACTTCCG 60.288 50.000 0.00 0.00 0.00 4.30
2102 2234 3.063485 GTGCAACTCTCTCTCAACTTCC 58.937 50.000 0.00 0.00 0.00 3.46
2103 2235 3.063485 GGTGCAACTCTCTCTCAACTTC 58.937 50.000 0.00 0.00 36.74 3.01
2104 2236 2.703007 AGGTGCAACTCTCTCTCAACTT 59.297 45.455 0.00 0.00 36.74 2.66
2105 2237 2.298729 GAGGTGCAACTCTCTCTCAACT 59.701 50.000 24.80 0.00 36.74 3.16
2106 2238 2.298729 AGAGGTGCAACTCTCTCTCAAC 59.701 50.000 28.85 0.14 44.23 3.18
2107 2239 2.603021 AGAGGTGCAACTCTCTCTCAA 58.397 47.619 28.85 0.00 44.23 3.02
2108 2240 2.300956 AGAGGTGCAACTCTCTCTCA 57.699 50.000 28.85 0.00 44.23 3.27
2109 2241 3.676291 AAAGAGGTGCAACTCTCTCTC 57.324 47.619 33.62 6.52 46.70 3.20
2110 2242 6.127196 CCTTATAAAGAGGTGCAACTCTCTCT 60.127 42.308 33.62 22.29 46.70 3.10
2111 2243 6.045955 CCTTATAAAGAGGTGCAACTCTCTC 58.954 44.000 33.62 7.77 46.70 3.20
2112 2244 5.485708 ACCTTATAAAGAGGTGCAACTCTCT 59.514 40.000 33.62 23.89 46.70 3.10
2113 2245 5.735766 ACCTTATAAAGAGGTGCAACTCTC 58.264 41.667 33.62 18.20 46.70 3.20
2123 2255 6.478512 AGAAGAGCTCACCTTATAAAGAGG 57.521 41.667 17.77 0.62 40.24 3.69
2124 2256 7.068839 TGGTAGAAGAGCTCACCTTATAAAGAG 59.931 40.741 17.77 5.36 32.04 2.85
2125 2257 6.895756 TGGTAGAAGAGCTCACCTTATAAAGA 59.104 38.462 17.77 0.00 32.04 2.52
2126 2258 6.981559 GTGGTAGAAGAGCTCACCTTATAAAG 59.018 42.308 17.77 0.00 32.04 1.85
2127 2259 6.668283 AGTGGTAGAAGAGCTCACCTTATAAA 59.332 38.462 17.77 0.00 32.04 1.40
2128 2260 6.195700 AGTGGTAGAAGAGCTCACCTTATAA 58.804 40.000 17.77 0.00 32.04 0.98
2129 2261 5.767670 AGTGGTAGAAGAGCTCACCTTATA 58.232 41.667 17.77 0.21 32.04 0.98
2130 2262 4.615513 AGTGGTAGAAGAGCTCACCTTAT 58.384 43.478 17.77 1.27 32.04 1.73
2131 2263 4.048970 AGTGGTAGAAGAGCTCACCTTA 57.951 45.455 17.77 0.00 32.04 2.69
2132 2264 2.896039 AGTGGTAGAAGAGCTCACCTT 58.104 47.619 17.77 0.63 32.04 3.50
2133 2265 2.564947 CAAGTGGTAGAAGAGCTCACCT 59.435 50.000 17.77 14.23 32.04 4.00
2134 2266 2.300437 ACAAGTGGTAGAAGAGCTCACC 59.700 50.000 17.77 14.97 0.00 4.02
2135 2267 3.669251 ACAAGTGGTAGAAGAGCTCAC 57.331 47.619 17.77 9.64 0.00 3.51
2136 2268 5.016831 TCATACAAGTGGTAGAAGAGCTCA 58.983 41.667 17.77 0.00 34.92 4.26
2137 2269 5.584253 TCATACAAGTGGTAGAAGAGCTC 57.416 43.478 5.27 5.27 34.92 4.09
2138 2270 4.142049 GCTCATACAAGTGGTAGAAGAGCT 60.142 45.833 16.53 0.00 44.01 4.09
2139 2271 4.116238 GCTCATACAAGTGGTAGAAGAGC 58.884 47.826 11.55 11.55 42.60 4.09
2140 2272 5.330455 TGCTCATACAAGTGGTAGAAGAG 57.670 43.478 0.00 0.00 34.92 2.85
2141 2273 5.422012 TCATGCTCATACAAGTGGTAGAAGA 59.578 40.000 0.00 0.00 34.92 2.87
2142 2274 5.664457 TCATGCTCATACAAGTGGTAGAAG 58.336 41.667 0.00 0.00 34.92 2.85
2143 2275 5.422012 TCTCATGCTCATACAAGTGGTAGAA 59.578 40.000 0.00 0.00 34.92 2.10
2144 2276 4.956075 TCTCATGCTCATACAAGTGGTAGA 59.044 41.667 0.00 0.00 34.92 2.59
2145 2277 5.268118 TCTCATGCTCATACAAGTGGTAG 57.732 43.478 0.00 0.00 34.92 3.18
2146 2278 5.422012 TCTTCTCATGCTCATACAAGTGGTA 59.578 40.000 0.00 0.00 36.16 3.25
2147 2279 4.223700 TCTTCTCATGCTCATACAAGTGGT 59.776 41.667 0.00 0.00 0.00 4.16
2148 2280 4.763073 TCTTCTCATGCTCATACAAGTGG 58.237 43.478 0.00 0.00 0.00 4.00
2149 2281 4.809958 CCTCTTCTCATGCTCATACAAGTG 59.190 45.833 0.00 0.00 0.00 3.16
2150 2282 4.713814 TCCTCTTCTCATGCTCATACAAGT 59.286 41.667 0.00 0.00 0.00 3.16
2151 2283 5.068855 TCTCCTCTTCTCATGCTCATACAAG 59.931 44.000 0.00 0.00 0.00 3.16
2152 2284 4.958581 TCTCCTCTTCTCATGCTCATACAA 59.041 41.667 0.00 0.00 0.00 2.41
2153 2285 4.340666 GTCTCCTCTTCTCATGCTCATACA 59.659 45.833 0.00 0.00 0.00 2.29
2154 2286 4.261994 GGTCTCCTCTTCTCATGCTCATAC 60.262 50.000 0.00 0.00 0.00 2.39
2155 2287 3.894427 GGTCTCCTCTTCTCATGCTCATA 59.106 47.826 0.00 0.00 0.00 2.15
2156 2288 2.699846 GGTCTCCTCTTCTCATGCTCAT 59.300 50.000 0.00 0.00 0.00 2.90
2157 2289 2.106566 GGTCTCCTCTTCTCATGCTCA 58.893 52.381 0.00 0.00 0.00 4.26
2158 2290 2.387757 AGGTCTCCTCTTCTCATGCTC 58.612 52.381 0.00 0.00 0.00 4.26
2159 2291 2.548464 AGGTCTCCTCTTCTCATGCT 57.452 50.000 0.00 0.00 0.00 3.79
2160 2292 3.027412 TGTAGGTCTCCTCTTCTCATGC 58.973 50.000 0.00 0.00 34.61 4.06
2161 2293 3.066064 CGTGTAGGTCTCCTCTTCTCATG 59.934 52.174 0.00 0.00 34.61 3.07
2162 2294 3.283751 CGTGTAGGTCTCCTCTTCTCAT 58.716 50.000 0.00 0.00 34.61 2.90
2163 2295 2.712709 CGTGTAGGTCTCCTCTTCTCA 58.287 52.381 0.00 0.00 34.61 3.27
2164 2296 1.402613 GCGTGTAGGTCTCCTCTTCTC 59.597 57.143 0.00 0.00 34.61 2.87
2165 2297 1.465794 GCGTGTAGGTCTCCTCTTCT 58.534 55.000 0.00 0.00 34.61 2.85
2166 2298 0.099082 CGCGTGTAGGTCTCCTCTTC 59.901 60.000 0.00 0.00 34.61 2.87
2167 2299 1.935327 GCGCGTGTAGGTCTCCTCTT 61.935 60.000 8.43 0.00 34.61 2.85
2168 2300 2.408241 GCGCGTGTAGGTCTCCTCT 61.408 63.158 8.43 0.00 34.61 3.69
2169 2301 2.102553 GCGCGTGTAGGTCTCCTC 59.897 66.667 8.43 0.00 34.61 3.71
2170 2302 3.812019 CGCGCGTGTAGGTCTCCT 61.812 66.667 24.19 0.00 37.71 3.69
2172 2304 4.477975 AGCGCGCGTGTAGGTCTC 62.478 66.667 32.35 11.09 0.00 3.36
2173 2305 4.477975 GAGCGCGCGTGTAGGTCT 62.478 66.667 32.35 17.82 0.00 3.85
2186 2318 3.591835 GAGCGAGGAGGAGGAGCG 61.592 72.222 0.00 0.00 0.00 5.03
2187 2319 3.591835 CGAGCGAGGAGGAGGAGC 61.592 72.222 0.00 0.00 0.00 4.70
2188 2320 3.591835 GCGAGCGAGGAGGAGGAG 61.592 72.222 0.00 0.00 0.00 3.69
2191 2323 3.591835 GAGGCGAGCGAGGAGGAG 61.592 72.222 0.00 0.00 0.00 3.69
2210 2342 4.337060 TGACGAGTCGTGGCGTGG 62.337 66.667 25.31 0.00 41.37 4.94
2211 2343 3.097728 GTGACGAGTCGTGGCGTG 61.098 66.667 25.31 0.00 41.37 5.34
2212 2344 4.678269 CGTGACGAGTCGTGGCGT 62.678 66.667 25.31 0.00 41.37 5.68
2213 2345 4.379143 TCGTGACGAGTCGTGGCG 62.379 66.667 25.31 24.41 41.37 5.69
2214 2346 2.799916 GTCGTGACGAGTCGTGGC 60.800 66.667 25.31 14.01 41.37 5.01
2237 2369 3.508840 CTCAATCCCGCAACCCGC 61.509 66.667 0.00 0.00 35.03 6.13
2238 2370 3.508840 GCTCAATCCCGCAACCCG 61.509 66.667 0.00 0.00 0.00 5.28
2239 2371 3.140814 GGCTCAATCCCGCAACCC 61.141 66.667 0.00 0.00 0.00 4.11
2240 2372 1.937546 CTTGGCTCAATCCCGCAACC 61.938 60.000 0.00 0.00 0.00 3.77
2241 2373 1.508088 CTTGGCTCAATCCCGCAAC 59.492 57.895 0.00 0.00 0.00 4.17
2242 2374 1.678635 CCTTGGCTCAATCCCGCAA 60.679 57.895 0.00 0.00 0.00 4.85
2243 2375 2.045045 CCTTGGCTCAATCCCGCA 60.045 61.111 0.00 0.00 0.00 5.69
2244 2376 2.115291 GTCCTTGGCTCAATCCCGC 61.115 63.158 0.00 0.00 0.00 6.13
2245 2377 0.745845 CTGTCCTTGGCTCAATCCCG 60.746 60.000 0.00 0.00 0.00 5.14
2246 2378 0.620556 TCTGTCCTTGGCTCAATCCC 59.379 55.000 0.00 0.00 0.00 3.85
2247 2379 2.016096 GCTCTGTCCTTGGCTCAATCC 61.016 57.143 0.00 0.00 0.00 3.01
2248 2380 1.065564 AGCTCTGTCCTTGGCTCAATC 60.066 52.381 0.00 0.00 0.00 2.67
2249 2381 0.990374 AGCTCTGTCCTTGGCTCAAT 59.010 50.000 0.00 0.00 0.00 2.57
2250 2382 1.644509 TAGCTCTGTCCTTGGCTCAA 58.355 50.000 0.00 0.00 36.40 3.02
2251 2383 1.483827 CATAGCTCTGTCCTTGGCTCA 59.516 52.381 0.00 0.00 36.40 4.26
2252 2384 1.809651 GCATAGCTCTGTCCTTGGCTC 60.810 57.143 0.00 0.00 36.40 4.70
2253 2385 0.179936 GCATAGCTCTGTCCTTGGCT 59.820 55.000 0.00 0.00 38.62 4.75
2254 2386 0.107508 TGCATAGCTCTGTCCTTGGC 60.108 55.000 0.00 0.00 0.00 4.52
2255 2387 1.661341 GTGCATAGCTCTGTCCTTGG 58.339 55.000 0.00 0.00 0.00 3.61
2256 2388 1.284657 CGTGCATAGCTCTGTCCTTG 58.715 55.000 0.00 0.00 0.00 3.61
2257 2389 0.898320 ACGTGCATAGCTCTGTCCTT 59.102 50.000 0.00 0.00 0.00 3.36
2258 2390 0.898320 AACGTGCATAGCTCTGTCCT 59.102 50.000 0.00 0.00 0.00 3.85
2259 2391 1.002366 CAACGTGCATAGCTCTGTCC 58.998 55.000 0.00 0.00 0.00 4.02
2260 2392 1.656095 GACAACGTGCATAGCTCTGTC 59.344 52.381 0.00 0.00 0.00 3.51
2261 2393 1.273606 AGACAACGTGCATAGCTCTGT 59.726 47.619 0.00 0.00 0.00 3.41
2262 2394 2.001812 AGACAACGTGCATAGCTCTG 57.998 50.000 0.00 0.00 0.00 3.35
2263 2395 5.713792 ATATAGACAACGTGCATAGCTCT 57.286 39.130 0.00 0.00 0.00 4.09
2264 2396 6.771188 AAATATAGACAACGTGCATAGCTC 57.229 37.500 0.00 0.00 0.00 4.09
2265 2397 7.409697 CAAAAATATAGACAACGTGCATAGCT 58.590 34.615 0.00 0.00 0.00 3.32
2266 2398 6.140737 GCAAAAATATAGACAACGTGCATAGC 59.859 38.462 0.00 0.00 0.00 2.97
2267 2399 7.374228 CAGCAAAAATATAGACAACGTGCATAG 59.626 37.037 0.00 0.00 31.95 2.23
2268 2400 7.186128 CAGCAAAAATATAGACAACGTGCATA 58.814 34.615 0.00 0.00 31.95 3.14
2269 2401 6.029607 CAGCAAAAATATAGACAACGTGCAT 58.970 36.000 0.00 0.00 31.95 3.96
2270 2402 5.389778 CAGCAAAAATATAGACAACGTGCA 58.610 37.500 0.00 0.00 31.95 4.57
2271 2403 4.262976 GCAGCAAAAATATAGACAACGTGC 59.737 41.667 0.00 0.00 0.00 5.34
2272 2404 5.389778 TGCAGCAAAAATATAGACAACGTG 58.610 37.500 0.00 0.00 0.00 4.49
2273 2405 5.621197 TGCAGCAAAAATATAGACAACGT 57.379 34.783 0.00 0.00 0.00 3.99
2274 2406 5.456497 CCATGCAGCAAAAATATAGACAACG 59.544 40.000 0.00 0.00 0.00 4.10
2275 2407 5.750067 CCCATGCAGCAAAAATATAGACAAC 59.250 40.000 0.00 0.00 0.00 3.32
2276 2408 5.904941 CCCATGCAGCAAAAATATAGACAA 58.095 37.500 0.00 0.00 0.00 3.18
2277 2409 5.518848 CCCATGCAGCAAAAATATAGACA 57.481 39.130 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.