AutoCloner

Multiple sequence alignment - TraesCS6A01G303600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6A01G303600	chr6A	100.000	2482	0	0	1	2482	536763085	536765566	0.000000e+00	4584.0
1	TraesCS6A01G303600	chr6A	85.989	1142	64	45	643	1707	536648075	536649197	0.000000e+00	1134.0
2	TraesCS6A01G303600	chr6A	95.627	526	20	3	1822	2347	536663605	536664127	0.000000e+00	841.0
3	TraesCS6A01G303600	chr6A	92.138	318	6	7	321	620	467575422	467575106	4.900000e-117	431.0
4	TraesCS6A01G303600	chr6A	91.536	319	9	1	321	621	465328743	465328425	8.210000e-115	424.0
5	TraesCS6A01G303600	chr6A	98.655	223	3	0	1	223	467575200	467575422	1.790000e-106	396.0
6	TraesCS6A01G303600	chr6A	98.913	184	0	2	225	407	536763491	536763309	6.620000e-86	327.0
7	TraesCS6A01G303600	chr6A	96.552	145	5	0	2338	2482	536664349	536664493	8.870000e-60	241.0
8	TraesCS6A01G303600	chr6A	79.772	351	33	16	303	623	7381613	7381271	1.160000e-53	220.0
9	TraesCS6A01G303600	chr6A	100.000	90	0	0	225	314	536763221	536763310	1.530000e-37	167.0
10	TraesCS6A01G303600	chr6A	98.889	90	1	0	225	314	6270035	6269946	7.100000e-36	161.0
11	TraesCS6A01G303600	chr6A	98.889	90	1	0	225	314	144514060	144513971	7.100000e-36	161.0
12	TraesCS6A01G303600	chr6A	88.889	135	1	3	1687	1820	536663298	536663419	1.190000e-33	154.0
13	TraesCS6A01G303600	chr6D	91.363	961	48	17	640	1578	390161111	390162058	0.000000e+00	1282.0
14	TraesCS6A01G303600	chr6D	88.660	776	41	24	653	1403	390228811	390229564	0.000000e+00	902.0
15	TraesCS6A01G303600	chr6D	84.746	590	45	17	1929	2480	390162768	390163350	1.300000e-152	549.0
16	TraesCS6A01G303600	chr6D	86.943	314	27	4	321	620	113673920	113673607	8.500000e-90	340.0
17	TraesCS6A01G303600	chr6B	91.371	788	35	16	643	1403	584052664	584051883	0.000000e+00	1048.0
18	TraesCS6A01G303600	chr6B	86.645	307	22	8	321	612	579211420	579211118	3.080000e-84	322.0
19	TraesCS6A01G303600	chr6B	95.098	102	4	1	225	325	514694642	514694743	2.560000e-35	159.0
20	TraesCS6A01G303600	chr4B	92.767	318	5	1	321	620	4887403	4887720	6.300000e-121	444.0
21	TraesCS6A01G303600	chr4B	92.767	318	5	1	321	620	128541192	128540875	6.300000e-121	444.0
22	TraesCS6A01G303600	chr4B	92.063	315	7	6	321	617	240175038	240174724	6.340000e-116	427.0
23	TraesCS6A01G303600	chr4B	99.103	223	2	0	1	223	245685875	245686097	3.840000e-108	401.0
24	TraesCS6A01G303600	chr4B	98.655	223	3	0	1	223	128540970	128541192	1.790000e-106	396.0
25	TraesCS6A01G303600	chr4B	98.655	223	3	0	1	223	240174816	240175038	1.790000e-106	396.0
26	TraesCS6A01G303600	chr4B	98.230	226	4	0	1	226	363006982	363006757	1.790000e-106	396.0
27	TraesCS6A01G303600	chr4B	98.655	223	3	0	1	223	370705679	370705901	1.790000e-106	396.0
28	TraesCS6A01G303600	chr4B	98.655	223	3	0	1	223	492204442	492204664	1.790000e-106	396.0
29	TraesCS6A01G303600	chr2A	93.016	315	4	1	321	617	574971995	574971681	6.300000e-121	444.0
30	TraesCS6A01G303600	chr7B	92.722	316	5	3	321	618	472244388	472244073	8.150000e-120	440.0
31	TraesCS6A01G303600	chr7B	92.675	314	5	3	323	618	253686671	253686358	1.050000e-118	436.0
32	TraesCS6A01G303600	chr7B	85.498	331	27	12	321	634	109923358	109923684	2.380000e-85	326.0
33	TraesCS6A01G303600	chr3B	98.673	226	3	0	1	226	787804791	787804566	3.840000e-108	401.0
34	TraesCS6A01G303600	chr3B	98.246	228	2	2	1	226	224961491	224961264	4.970000e-107	398.0
35	TraesCS6A01G303600	chr2B	99.519	208	1	0	321	528	423093918	423093711	1.800000e-101	379.0
36	TraesCS6A01G303600	chr2B	88.498	313	20	4	321	621	799862164	799861856	5.040000e-97	364.0
37	TraesCS6A01G303600	chr2B	98.913	92	1	0	225	316	546952110	546952201	5.490000e-37	165.0
38	TraesCS6A01G303600	chr1A	89.172	314	17	6	321	620	33396944	33396634	2.330000e-100	375.0
39	TraesCS6A01G303600	chr1A	88.854	314	18	6	321	620	33392152	33391842	1.080000e-98	370.0
40	TraesCS6A01G303600	chr1A	84.295	312	30	9	321	618	555549979	555550285	1.120000e-73	287.0
41	TraesCS6A01G303600	chr1A	82.647	340	28	7	311	620	470641730	470641392	3.150000e-69	272.0
42	TraesCS6A01G303600	chr1A	100.000	28	0	0	617	644	29811034	29811007	4.000000e-03	52.8
43	TraesCS6A01G303600	chr1A	100.000	28	0	0	617	644	113474502	113474475	4.000000e-03	52.8
44	TraesCS6A01G303600	chr7A	87.086	302	22	6	333	617	509523770	509523469	2.380000e-85	326.0
45	TraesCS6A01G303600	chr7A	100.000	28	0	0	617	644	317176001	317175974	4.000000e-03	52.8
46	TraesCS6A01G303600	chr2D	86.452	310	27	9	321	618	336512529	336512223	2.380000e-85	326.0
47	TraesCS6A01G303600	chr5A	84.776	335	20	9	308	612	60129708	60130041	8.620000e-80	307.0
48	TraesCS6A01G303600	chr7D	82.178	303	23	12	371	643	20080866	20080565	5.340000e-57	231.0
49	TraesCS6A01G303600	chr4A	83.936	249	11	7	421	640	669583632	669583384	6.950000e-51	211.0
50	TraesCS6A01G303600	chr5B	98.901	91	1	0	224	314	68928858	68928768	1.980000e-36	163.0
51	TraesCS6A01G303600	chr5B	100.000	28	0	0	617	644	131715867	131715840	4.000000e-03	52.8
52	TraesCS6A01G303600	chrUn	98.889	90	1	0	225	314	67012088	67011999	7.100000e-36	161.0
53	TraesCS6A01G303600	chrUn	100.000	87	0	0	225	311	171265177	171265263	7.100000e-36	161.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6A01G303600	chr6A	536763085	536765566	2481	False	2375.5	4584	100.000000	1	2482	2	chr6A.!!$F4	2481
1	TraesCS6A01G303600	chr6A	536648075	536649197	1122	False	1134.0	1134	85.989000	643	1707	1	chr6A.!!$F2	1064
2	TraesCS6A01G303600	chr6A	536663298	536664493	1195	False	412.0	841	93.689333	1687	2482	3	chr6A.!!$F3	795
3	TraesCS6A01G303600	chr6D	390161111	390163350	2239	False	915.5	1282	88.054500	640	2480	2	chr6D.!!$F2	1840
4	TraesCS6A01G303600	chr6D	390228811	390229564	753	False	902.0	902	88.660000	653	1403	1	chr6D.!!$F1	750
5	TraesCS6A01G303600	chr6B	584051883	584052664	781	True	1048.0	1048	91.371000	643	1403	1	chr6B.!!$R2	760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
612	613	0.249398	AGTCCCGTGTATCCAAGCAC	59.751	55.0	0.0	0.0	0.0	4.4	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2326	2926	0.451783	CAGTTGGGGCGTATTGAAGC	59.548	55.0	0.0	0.0	0.0	3.86	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	2.661718	GCTAGGACTAGTCTTGAGGCT	58.338	52.381	21.88	11.79	35.65	4.58
21	22	3.822940	GCTAGGACTAGTCTTGAGGCTA	58.177	50.000	21.88	12.27	35.65	3.93
22	23	4.208746	GCTAGGACTAGTCTTGAGGCTAA	58.791	47.826	21.88	0.00	35.65	3.09
23	24	4.645588	GCTAGGACTAGTCTTGAGGCTAAA	59.354	45.833	21.88	0.00	35.65	1.85
24	25	5.127356	GCTAGGACTAGTCTTGAGGCTAAAA	59.873	44.000	21.88	0.00	35.65	1.52
25	26	6.183360	GCTAGGACTAGTCTTGAGGCTAAAAT	60.183	42.308	21.88	0.00	35.65	1.82
26	27	6.228616	AGGACTAGTCTTGAGGCTAAAATC	57.771	41.667	21.88	0.73	0.00	2.17
27	28	5.961421	AGGACTAGTCTTGAGGCTAAAATCT	59.039	40.000	21.88	3.06	0.00	2.40
28	29	6.442244	AGGACTAGTCTTGAGGCTAAAATCTT	59.558	38.462	21.88	0.00	0.00	2.40
29	30	7.037945	AGGACTAGTCTTGAGGCTAAAATCTTT	60.038	37.037	21.88	0.00	0.00	2.52
30	31	7.608376	GGACTAGTCTTGAGGCTAAAATCTTTT	59.392	37.037	21.88	0.00	0.00	2.27
31	32	9.654663	GACTAGTCTTGAGGCTAAAATCTTTTA	57.345	33.333	15.91	0.00	0.00	1.52
45	46	9.025041	CTAAAATCTTTTAGTCATGGGAAACCT	57.975	33.333	12.31	0.00	45.91	3.50
75	76	8.734593	AAATATGTATTAGCTTCCTCTCTCCT	57.265	34.615	0.00	0.00	0.00	3.69
76	77	7.954666	ATATGTATTAGCTTCCTCTCTCCTC	57.045	40.000	0.00	0.00	0.00	3.71
77	78	5.130705	TGTATTAGCTTCCTCTCTCCTCA	57.869	43.478	0.00	0.00	0.00	3.86
78	79	5.710646	TGTATTAGCTTCCTCTCTCCTCAT	58.289	41.667	0.00	0.00	0.00	2.90
79	80	6.139671	TGTATTAGCTTCCTCTCTCCTCATT	58.860	40.000	0.00	0.00	0.00	2.57
80	81	6.613271	TGTATTAGCTTCCTCTCTCCTCATTT	59.387	38.462	0.00	0.00	0.00	2.32
81	82	7.785028	TGTATTAGCTTCCTCTCTCCTCATTTA	59.215	37.037	0.00	0.00	0.00	1.40
82	83	7.682787	ATTAGCTTCCTCTCTCCTCATTTAA	57.317	36.000	0.00	0.00	0.00	1.52
83	84	7.682787	TTAGCTTCCTCTCTCCTCATTTAAT	57.317	36.000	0.00	0.00	0.00	1.40
84	85	6.573712	AGCTTCCTCTCTCCTCATTTAATT	57.426	37.500	0.00	0.00	0.00	1.40
85	86	6.967897	AGCTTCCTCTCTCCTCATTTAATTT	58.032	36.000	0.00	0.00	0.00	1.82
86	87	7.053498	AGCTTCCTCTCTCCTCATTTAATTTC	58.947	38.462	0.00	0.00	0.00	2.17
87	88	7.053498	GCTTCCTCTCTCCTCATTTAATTTCT	58.947	38.462	0.00	0.00	0.00	2.52
88	89	7.226523	GCTTCCTCTCTCCTCATTTAATTTCTC	59.773	40.741	0.00	0.00	0.00	2.87
89	90	7.986553	TCCTCTCTCCTCATTTAATTTCTCT	57.013	36.000	0.00	0.00	0.00	3.10
90	91	8.017418	TCCTCTCTCCTCATTTAATTTCTCTC	57.983	38.462	0.00	0.00	0.00	3.20
91	92	7.070571	TCCTCTCTCCTCATTTAATTTCTCTCC	59.929	40.741	0.00	0.00	0.00	3.71
92	93	7.071071	CCTCTCTCCTCATTTAATTTCTCTCCT	59.929	40.741	0.00	0.00	0.00	3.69
93	94	8.386012	TCTCTCCTCATTTAATTTCTCTCCTT	57.614	34.615	0.00	0.00	0.00	3.36
94	95	9.494055	TCTCTCCTCATTTAATTTCTCTCCTTA	57.506	33.333	0.00	0.00	0.00	2.69
95	96	9.762933	CTCTCCTCATTTAATTTCTCTCCTTAG	57.237	37.037	0.00	0.00	0.00	2.18
96	97	9.273137	TCTCCTCATTTAATTTCTCTCCTTAGT	57.727	33.333	0.00	0.00	0.00	2.24
97	98	9.898152	CTCCTCATTTAATTTCTCTCCTTAGTT	57.102	33.333	0.00	0.00	0.00	2.24
98	99	9.892130	TCCTCATTTAATTTCTCTCCTTAGTTC	57.108	33.333	0.00	0.00	0.00	3.01
99	100	9.898152	CCTCATTTAATTTCTCTCCTTAGTTCT	57.102	33.333	0.00	0.00	0.00	3.01
101	102	9.672673	TCATTTAATTTCTCTCCTTAGTTCTGG	57.327	33.333	0.00	0.00	0.00	3.86
102	103	9.672673	CATTTAATTTCTCTCCTTAGTTCTGGA	57.327	33.333	0.00	0.00	0.00	3.86
105	106	9.672673	TTAATTTCTCTCCTTAGTTCTGGATTG	57.327	33.333	0.00	0.00	0.00	2.67
106	107	5.683876	TTCTCTCCTTAGTTCTGGATTGG	57.316	43.478	0.00	0.00	0.00	3.16
107	108	4.947883	TCTCTCCTTAGTTCTGGATTGGA	58.052	43.478	0.00	0.00	0.00	3.53
108	109	4.959210	TCTCTCCTTAGTTCTGGATTGGAG	59.041	45.833	0.00	0.00	40.47	3.86
109	110	4.033709	TCTCCTTAGTTCTGGATTGGAGG	58.966	47.826	0.00	0.00	39.80	4.30
110	111	3.115390	TCCTTAGTTCTGGATTGGAGGG	58.885	50.000	0.00	0.00	0.00	4.30
111	112	2.846827	CCTTAGTTCTGGATTGGAGGGT	59.153	50.000	0.00	0.00	0.00	4.34
112	113	3.267031	CCTTAGTTCTGGATTGGAGGGTT	59.733	47.826	0.00	0.00	0.00	4.11
113	114	4.263949	CCTTAGTTCTGGATTGGAGGGTTT	60.264	45.833	0.00	0.00	0.00	3.27
114	115	3.160679	AGTTCTGGATTGGAGGGTTTG	57.839	47.619	0.00	0.00	0.00	2.93
115	116	2.171003	GTTCTGGATTGGAGGGTTTGG	58.829	52.381	0.00	0.00	0.00	3.28
116	117	1.753903	TCTGGATTGGAGGGTTTGGA	58.246	50.000	0.00	0.00	0.00	3.53
117	118	1.635487	TCTGGATTGGAGGGTTTGGAG	59.365	52.381	0.00	0.00	0.00	3.86
118	119	0.704076	TGGATTGGAGGGTTTGGAGG	59.296	55.000	0.00	0.00	0.00	4.30
119	120	0.999712	GGATTGGAGGGTTTGGAGGA	59.000	55.000	0.00	0.00	0.00	3.71
120	121	1.570979	GGATTGGAGGGTTTGGAGGAT	59.429	52.381	0.00	0.00	0.00	3.24
121	122	2.783510	GGATTGGAGGGTTTGGAGGATA	59.216	50.000	0.00	0.00	0.00	2.59
122	123	3.204382	GGATTGGAGGGTTTGGAGGATAA	59.796	47.826	0.00	0.00	0.00	1.75
123	124	4.140924	GGATTGGAGGGTTTGGAGGATAAT	60.141	45.833	0.00	0.00	0.00	1.28
124	125	5.074515	GGATTGGAGGGTTTGGAGGATAATA	59.925	44.000	0.00	0.00	0.00	0.98
125	126	6.411554	GGATTGGAGGGTTTGGAGGATAATAA	60.412	42.308	0.00	0.00	0.00	1.40
126	127	6.410222	TTGGAGGGTTTGGAGGATAATAAA	57.590	37.500	0.00	0.00	0.00	1.40
127	128	6.606241	TGGAGGGTTTGGAGGATAATAAAT	57.394	37.500	0.00	0.00	0.00	1.40
128	129	6.372931	TGGAGGGTTTGGAGGATAATAAATG	58.627	40.000	0.00	0.00	0.00	2.32
129	130	5.243954	GGAGGGTTTGGAGGATAATAAATGC	59.756	44.000	0.00	0.00	0.00	3.56
130	131	6.030727	AGGGTTTGGAGGATAATAAATGCT	57.969	37.500	0.00	0.00	0.00	3.79
131	132	6.071320	AGGGTTTGGAGGATAATAAATGCTC	58.929	40.000	0.00	0.00	36.02	4.26
132	133	5.833131	GGGTTTGGAGGATAATAAATGCTCA	59.167	40.000	8.48	0.00	38.10	4.26
133	134	6.323739	GGGTTTGGAGGATAATAAATGCTCAA	59.676	38.462	8.48	0.00	38.10	3.02
134	135	7.015584	GGGTTTGGAGGATAATAAATGCTCAAT	59.984	37.037	8.48	0.00	38.10	2.57
135	136	9.077885	GGTTTGGAGGATAATAAATGCTCAATA	57.922	33.333	8.48	0.00	38.10	1.90
138	139	9.866655	TTGGAGGATAATAAATGCTCAATAACT	57.133	29.630	8.48	0.00	38.10	2.24
171	172	7.051000	AGTCTCTTTAGTATTTGGATCCAAGC	58.949	38.462	25.69	19.18	37.24	4.01
172	173	6.823689	GTCTCTTTAGTATTTGGATCCAAGCA	59.176	38.462	25.69	14.00	37.24	3.91
173	174	7.500559	GTCTCTTTAGTATTTGGATCCAAGCAT	59.499	37.037	25.69	19.69	37.24	3.79
174	175	7.500227	TCTCTTTAGTATTTGGATCCAAGCATG	59.500	37.037	25.69	12.43	37.24	4.06
185	186	2.322355	CCAAGCATGGGTGAGACTAG	57.678	55.000	0.00	0.00	43.51	2.57
186	187	1.661341	CAAGCATGGGTGAGACTAGC	58.339	55.000	0.00	0.00	0.00	3.42
187	188	1.065926	CAAGCATGGGTGAGACTAGCA	60.066	52.381	0.00	0.00	0.00	3.49
188	189	1.279496	AGCATGGGTGAGACTAGCAA	58.721	50.000	0.00	0.00	0.00	3.91
189	190	1.209019	AGCATGGGTGAGACTAGCAAG	59.791	52.381	0.00	0.00	0.00	4.01
190	191	1.065854	GCATGGGTGAGACTAGCAAGT	60.066	52.381	0.00	0.00	39.21	3.16
191	192	2.616510	GCATGGGTGAGACTAGCAAGTT	60.617	50.000	0.00	0.00	35.56	2.66
192	193	3.679389	CATGGGTGAGACTAGCAAGTTT	58.321	45.455	0.00	0.00	35.56	2.66
193	194	3.857157	TGGGTGAGACTAGCAAGTTTT	57.143	42.857	0.00	0.00	35.56	2.43
194	195	4.967084	TGGGTGAGACTAGCAAGTTTTA	57.033	40.909	0.00	0.00	35.56	1.52
195	196	4.894784	TGGGTGAGACTAGCAAGTTTTAG	58.105	43.478	0.00	0.00	35.56	1.85
196	197	4.347000	TGGGTGAGACTAGCAAGTTTTAGT	59.653	41.667	0.00	0.00	35.56	2.24
197	198	4.930405	GGGTGAGACTAGCAAGTTTTAGTC	59.070	45.833	13.08	13.08	43.83	2.59
198	199	4.930405	GGTGAGACTAGCAAGTTTTAGTCC	59.070	45.833	15.72	10.59	44.32	3.85
199	200	4.930405	GTGAGACTAGCAAGTTTTAGTCCC	59.070	45.833	15.72	8.76	44.32	4.46
200	201	4.591498	TGAGACTAGCAAGTTTTAGTCCCA	59.409	41.667	15.72	10.61	44.32	4.37
201	202	4.895961	AGACTAGCAAGTTTTAGTCCCAC	58.104	43.478	15.72	0.00	44.32	4.61
202	203	4.593634	AGACTAGCAAGTTTTAGTCCCACT	59.406	41.667	15.72	1.62	44.32	4.00
203	204	5.778750	AGACTAGCAAGTTTTAGTCCCACTA	59.221	40.000	15.72	0.00	44.32	2.74
204	205	5.791666	ACTAGCAAGTTTTAGTCCCACTAC	58.208	41.667	0.00	0.00	27.15	2.73
205	206	4.976540	AGCAAGTTTTAGTCCCACTACT	57.023	40.909	0.00	0.00	28.93	2.57
206	207	5.306114	AGCAAGTTTTAGTCCCACTACTT	57.694	39.130	0.00	0.00	28.93	2.24
207	208	5.691896	AGCAAGTTTTAGTCCCACTACTTT	58.308	37.500	0.00	0.00	28.93	2.66
208	209	6.127101	AGCAAGTTTTAGTCCCACTACTTTT	58.873	36.000	0.00	0.00	28.93	2.27
209	210	7.284820	AGCAAGTTTTAGTCCCACTACTTTTA	58.715	34.615	0.00	0.00	28.93	1.52
210	211	7.444487	AGCAAGTTTTAGTCCCACTACTTTTAG	59.556	37.037	0.00	0.00	28.93	1.85
211	212	7.228108	GCAAGTTTTAGTCCCACTACTTTTAGT	59.772	37.037	0.00	0.00	39.30	2.24
212	213	8.771766	CAAGTTTTAGTCCCACTACTTTTAGTC	58.228	37.037	0.00	0.00	36.31	2.59
213	214	8.026396	AGTTTTAGTCCCACTACTTTTAGTCA	57.974	34.615	0.00	0.00	36.31	3.41
214	215	8.657712	AGTTTTAGTCCCACTACTTTTAGTCAT	58.342	33.333	0.00	0.00	36.31	3.06
215	216	8.718734	GTTTTAGTCCCACTACTTTTAGTCATG	58.281	37.037	0.00	0.00	36.31	3.07
216	217	5.422214	AGTCCCACTACTTTTAGTCATGG	57.578	43.478	0.00	0.00	36.31	3.66
217	218	4.225267	AGTCCCACTACTTTTAGTCATGGG	59.775	45.833	16.70	16.70	46.94	4.00
236	237	8.697292	GTCATGGGACTAAGACTAGATTTTAGT	58.303	37.037	13.94	13.94	40.99	2.24
237	238	8.915036	TCATGGGACTAAGACTAGATTTTAGTC	58.085	37.037	22.86	22.86	46.33	2.59
259	260	7.051000	AGTCTCTTTAGTATTTGGATCCAAGC	58.949	38.462	25.69	19.18	37.24	4.01
260	261	6.823689	GTCTCTTTAGTATTTGGATCCAAGCA	59.176	38.462	25.69	14.00	37.24	3.91
261	262	7.500559	GTCTCTTTAGTATTTGGATCCAAGCAT	59.499	37.037	25.69	19.69	37.24	3.79
262	263	7.500227	TCTCTTTAGTATTTGGATCCAAGCATG	59.500	37.037	25.69	12.43	37.24	4.06
273	274	2.322355	CCAAGCATGGGTGAGACTAG	57.678	55.000	0.00	0.00	43.51	2.57
274	275	1.661341	CAAGCATGGGTGAGACTAGC	58.339	55.000	0.00	0.00	0.00	3.42
275	276	1.065926	CAAGCATGGGTGAGACTAGCA	60.066	52.381	0.00	0.00	0.00	3.49
276	277	1.279496	AGCATGGGTGAGACTAGCAA	58.721	50.000	0.00	0.00	0.00	3.91
277	278	1.209019	AGCATGGGTGAGACTAGCAAG	59.791	52.381	0.00	0.00	0.00	4.01
278	279	1.065854	GCATGGGTGAGACTAGCAAGT	60.066	52.381	0.00	0.00	39.21	3.16
279	280	2.616510	GCATGGGTGAGACTAGCAAGTT	60.617	50.000	0.00	0.00	35.56	2.66
280	281	3.679389	CATGGGTGAGACTAGCAAGTTT	58.321	45.455	0.00	0.00	35.56	2.66
281	282	3.857157	TGGGTGAGACTAGCAAGTTTT	57.143	42.857	0.00	0.00	35.56	2.43
282	283	4.967084	TGGGTGAGACTAGCAAGTTTTA	57.033	40.909	0.00	0.00	35.56	1.52
283	284	4.894784	TGGGTGAGACTAGCAAGTTTTAG	58.105	43.478	0.00	0.00	35.56	1.85
284	285	4.347000	TGGGTGAGACTAGCAAGTTTTAGT	59.653	41.667	0.00	0.00	35.56	2.24
285	286	4.930405	GGGTGAGACTAGCAAGTTTTAGTC	59.070	45.833	13.08	13.08	43.83	2.59
286	287	4.930405	GGTGAGACTAGCAAGTTTTAGTCC	59.070	45.833	15.72	10.59	44.32	3.85
287	288	4.930405	GTGAGACTAGCAAGTTTTAGTCCC	59.070	45.833	15.72	8.76	44.32	4.46
288	289	4.591498	TGAGACTAGCAAGTTTTAGTCCCA	59.409	41.667	15.72	10.61	44.32	4.37
289	290	4.895961	AGACTAGCAAGTTTTAGTCCCAC	58.104	43.478	15.72	0.00	44.32	4.61
290	291	4.593634	AGACTAGCAAGTTTTAGTCCCACT	59.406	41.667	15.72	1.62	44.32	4.00
291	292	5.778750	AGACTAGCAAGTTTTAGTCCCACTA	59.221	40.000	15.72	0.00	44.32	2.74
292	293	5.791666	ACTAGCAAGTTTTAGTCCCACTAC	58.208	41.667	0.00	0.00	27.15	2.73
293	294	4.976540	AGCAAGTTTTAGTCCCACTACT	57.023	40.909	0.00	0.00	28.93	2.57
294	295	5.306114	AGCAAGTTTTAGTCCCACTACTT	57.694	39.130	0.00	0.00	28.93	2.24
295	296	5.691896	AGCAAGTTTTAGTCCCACTACTTT	58.308	37.500	0.00	0.00	28.93	2.66
296	297	6.127101	AGCAAGTTTTAGTCCCACTACTTTT	58.873	36.000	0.00	0.00	28.93	2.27
297	298	7.284820	AGCAAGTTTTAGTCCCACTACTTTTA	58.715	34.615	0.00	0.00	28.93	1.52
298	299	7.444487	AGCAAGTTTTAGTCCCACTACTTTTAG	59.556	37.037	0.00	0.00	28.93	1.85
299	300	7.228108	GCAAGTTTTAGTCCCACTACTTTTAGT	59.772	37.037	0.00	0.00	39.30	2.24
300	301	8.771766	CAAGTTTTAGTCCCACTACTTTTAGTC	58.228	37.037	0.00	0.00	36.31	2.59
301	302	8.026396	AGTTTTAGTCCCACTACTTTTAGTCA	57.974	34.615	0.00	0.00	36.31	3.41
302	303	8.657712	AGTTTTAGTCCCACTACTTTTAGTCAT	58.342	33.333	0.00	0.00	36.31	3.06
303	304	8.718734	GTTTTAGTCCCACTACTTTTAGTCATG	58.281	37.037	0.00	0.00	36.31	3.07
304	305	5.422214	AGTCCCACTACTTTTAGTCATGG	57.578	43.478	0.00	0.00	36.31	3.66
305	306	4.225267	AGTCCCACTACTTTTAGTCATGGG	59.775	45.833	16.70	16.70	46.94	4.00
318	319	3.550437	GTCATGGGACTAAGACATGCT	57.450	47.619	0.00	0.00	41.22	3.79
319	320	3.462021	GTCATGGGACTAAGACATGCTC	58.538	50.000	0.00	0.00	41.22	4.26
320	321	3.133721	GTCATGGGACTAAGACATGCTCT	59.866	47.826	0.00	0.00	41.22	4.09
321	322	3.776969	TCATGGGACTAAGACATGCTCTT	59.223	43.478	12.93	12.93	41.22	2.85
322	323	4.962362	TCATGGGACTAAGACATGCTCTTA	59.038	41.667	13.56	13.56	41.22	2.10
330	331	3.834489	AGACATGCTCTTAGTCCCATG	57.166	47.619	0.00	0.00	40.54	3.66
331	332	3.378512	AGACATGCTCTTAGTCCCATGA	58.621	45.455	13.12	0.00	38.65	3.07
332	333	3.133721	AGACATGCTCTTAGTCCCATGAC	59.866	47.826	13.12	8.91	42.09	3.06
345	346	4.514401	GTCCCATGACTAAAAGTAGTGGG	58.486	47.826	17.22	17.22	46.41	4.61
348	349	5.422214	CCATGACTAAAAGTAGTGGGACT	57.578	43.478	0.00	0.00	40.82	3.85
349	350	6.540438	CCATGACTAAAAGTAGTGGGACTA	57.460	41.667	0.00	0.00	40.82	2.59
350	351	6.942976	CCATGACTAAAAGTAGTGGGACTAA	58.057	40.000	0.00	0.00	40.82	2.24
351	352	7.391620	CCATGACTAAAAGTAGTGGGACTAAA	58.608	38.462	0.00	0.00	40.82	1.85
352	353	7.881232	CCATGACTAAAAGTAGTGGGACTAAAA	59.119	37.037	0.00	0.00	40.82	1.52
353	354	8.718734	CATGACTAAAAGTAGTGGGACTAAAAC	58.281	37.037	0.00	0.00	40.82	2.43
354	355	8.026396	TGACTAAAAGTAGTGGGACTAAAACT	57.974	34.615	0.00	0.00	40.82	2.66
355	356	8.488668	TGACTAAAAGTAGTGGGACTAAAACTT	58.511	33.333	0.00	0.00	40.82	2.66
356	357	8.672823	ACTAAAAGTAGTGGGACTAAAACTTG	57.327	34.615	0.00	0.00	39.20	3.16
357	358	6.387041	AAAAGTAGTGGGACTAAAACTTGC	57.613	37.500	0.00	0.00	31.62	4.01
358	359	4.976540	AGTAGTGGGACTAAAACTTGCT	57.023	40.909	0.00	0.00	31.62	3.91
359	360	6.429521	AAGTAGTGGGACTAAAACTTGCTA	57.570	37.500	0.00	0.00	31.62	3.49
360	361	6.038997	AGTAGTGGGACTAAAACTTGCTAG	57.961	41.667	0.00	0.00	31.62	3.42
361	362	4.976540	AGTGGGACTAAAACTTGCTAGT	57.023	40.909	0.00	0.00	35.68	2.57
362	363	4.895961	AGTGGGACTAAAACTTGCTAGTC	58.104	43.478	0.07	0.62	42.17	2.59
363	364	4.593634	AGTGGGACTAAAACTTGCTAGTCT	59.406	41.667	0.07	0.00	42.42	3.24
364	365	4.930405	GTGGGACTAAAACTTGCTAGTCTC	59.070	45.833	0.07	1.39	43.29	3.36
365	366	5.148651	GGGACTAAAACTTGCTAGTCTCA	57.851	43.478	0.07	0.00	42.76	3.27
366	367	4.930405	GGGACTAAAACTTGCTAGTCTCAC	59.070	45.833	0.07	0.00	42.76	3.51
367	368	4.930405	GGACTAAAACTTGCTAGTCTCACC	59.070	45.833	0.07	0.00	42.42	4.02
368	369	4.895961	ACTAAAACTTGCTAGTCTCACCC	58.104	43.478	0.07	0.00	31.99	4.61
369	370	3.857157	AAAACTTGCTAGTCTCACCCA	57.143	42.857	0.07	0.00	31.99	4.51
370	371	4.373156	AAAACTTGCTAGTCTCACCCAT	57.627	40.909	0.07	0.00	31.99	4.00
371	372	3.340814	AACTTGCTAGTCTCACCCATG	57.659	47.619	0.07	0.00	31.99	3.66
372	373	1.065854	ACTTGCTAGTCTCACCCATGC	60.066	52.381	0.00	0.00	0.00	4.06
373	374	1.209019	CTTGCTAGTCTCACCCATGCT	59.791	52.381	0.00	0.00	0.00	3.79
374	375	1.279496	TGCTAGTCTCACCCATGCTT	58.721	50.000	0.00	0.00	0.00	3.91
375	376	1.065926	TGCTAGTCTCACCCATGCTTG	60.066	52.381	0.00	0.00	0.00	4.01
376	377	1.745141	GCTAGTCTCACCCATGCTTGG	60.745	57.143	11.68	11.68	43.23	3.61
377	378	1.833630	CTAGTCTCACCCATGCTTGGA	59.166	52.381	19.85	0.00	46.92	3.53
378	379	1.293062	AGTCTCACCCATGCTTGGAT	58.707	50.000	19.85	0.00	46.92	3.41
379	380	1.211457	AGTCTCACCCATGCTTGGATC	59.789	52.381	19.85	3.99	46.92	3.36
380	381	0.548031	TCTCACCCATGCTTGGATCC	59.452	55.000	19.85	4.20	46.92	3.36
381	382	0.256752	CTCACCCATGCTTGGATCCA	59.743	55.000	19.85	11.44	46.92	3.41
382	383	0.703488	TCACCCATGCTTGGATCCAA	59.297	50.000	25.53	25.53	46.92	3.53
383	384	1.076841	TCACCCATGCTTGGATCCAAA	59.923	47.619	26.87	14.63	46.92	3.28
384	385	2.112998	CACCCATGCTTGGATCCAAAT	58.887	47.619	26.87	16.27	46.92	2.32
385	386	3.053019	TCACCCATGCTTGGATCCAAATA	60.053	43.478	26.87	18.63	46.92	1.40
386	387	3.068590	CACCCATGCTTGGATCCAAATAC	59.931	47.826	26.87	19.00	46.92	1.89
387	388	3.052642	ACCCATGCTTGGATCCAAATACT	60.053	43.478	26.87	10.16	46.92	2.12
388	389	4.167892	ACCCATGCTTGGATCCAAATACTA	59.832	41.667	26.87	12.31	46.92	1.82
389	390	5.139727	CCCATGCTTGGATCCAAATACTAA	58.860	41.667	26.87	10.11	46.92	2.24
390	391	5.598005	CCCATGCTTGGATCCAAATACTAAA	59.402	40.000	26.87	8.81	46.92	1.85
391	392	6.239120	CCCATGCTTGGATCCAAATACTAAAG	60.239	42.308	26.87	14.21	46.92	1.85
392	393	6.547141	CCATGCTTGGATCCAAATACTAAAGA	59.453	38.462	26.87	1.90	46.92	2.52
393	394	7.255381	CCATGCTTGGATCCAAATACTAAAGAG	60.255	40.741	26.87	12.80	46.92	2.85
394	395	6.957631	TGCTTGGATCCAAATACTAAAGAGA	58.042	36.000	26.87	1.15	35.33	3.10
395	396	6.823689	TGCTTGGATCCAAATACTAAAGAGAC	59.176	38.462	26.87	8.83	35.33	3.36
396	397	7.051000	GCTTGGATCCAAATACTAAAGAGACT	58.949	38.462	26.87	0.00	35.33	3.24
397	398	8.204836	GCTTGGATCCAAATACTAAAGAGACTA	58.795	37.037	26.87	0.00	35.33	2.59
430	431	9.866655	AGTTATTGAGCATTTATTATCCTCCAA	57.133	29.630	0.00	0.00	0.00	3.53
433	434	6.959639	TGAGCATTTATTATCCTCCAAACC	57.040	37.500	0.00	0.00	0.00	3.27
434	435	5.833131	TGAGCATTTATTATCCTCCAAACCC	59.167	40.000	0.00	0.00	0.00	4.11
435	436	6.030727	AGCATTTATTATCCTCCAAACCCT	57.969	37.500	0.00	0.00	0.00	4.34
436	437	6.071320	AGCATTTATTATCCTCCAAACCCTC	58.929	40.000	0.00	0.00	0.00	4.30
437	438	5.243954	GCATTTATTATCCTCCAAACCCTCC	59.756	44.000	0.00	0.00	0.00	4.30
438	439	6.372931	CATTTATTATCCTCCAAACCCTCCA	58.627	40.000	0.00	0.00	0.00	3.86
439	440	6.410222	TTTATTATCCTCCAAACCCTCCAA	57.590	37.500	0.00	0.00	0.00	3.53
440	441	6.606241	TTATTATCCTCCAAACCCTCCAAT	57.394	37.500	0.00	0.00	0.00	3.16
441	442	4.519906	TTATCCTCCAAACCCTCCAATC	57.480	45.455	0.00	0.00	0.00	2.67
442	443	0.999712	TCCTCCAAACCCTCCAATCC	59.000	55.000	0.00	0.00	0.00	3.01
443	444	0.704076	CCTCCAAACCCTCCAATCCA	59.296	55.000	0.00	0.00	0.00	3.41
444	445	1.341383	CCTCCAAACCCTCCAATCCAG	60.341	57.143	0.00	0.00	0.00	3.86
445	446	1.635487	CTCCAAACCCTCCAATCCAGA	59.365	52.381	0.00	0.00	0.00	3.86
446	447	2.041620	CTCCAAACCCTCCAATCCAGAA	59.958	50.000	0.00	0.00	0.00	3.02
447	448	2.171003	CCAAACCCTCCAATCCAGAAC	58.829	52.381	0.00	0.00	0.00	3.01
448	449	2.225117	CCAAACCCTCCAATCCAGAACT	60.225	50.000	0.00	0.00	0.00	3.01
449	450	3.010138	CCAAACCCTCCAATCCAGAACTA	59.990	47.826	0.00	0.00	0.00	2.24
450	451	4.508405	CCAAACCCTCCAATCCAGAACTAA	60.508	45.833	0.00	0.00	0.00	2.24
451	452	5.076873	CAAACCCTCCAATCCAGAACTAAA	58.923	41.667	0.00	0.00	0.00	1.85
452	453	4.576330	ACCCTCCAATCCAGAACTAAAG	57.424	45.455	0.00	0.00	0.00	1.85
453	454	4.175962	ACCCTCCAATCCAGAACTAAAGA	58.824	43.478	0.00	0.00	0.00	2.52
454	455	4.226168	ACCCTCCAATCCAGAACTAAAGAG	59.774	45.833	0.00	0.00	0.00	2.85
455	456	4.471386	CCCTCCAATCCAGAACTAAAGAGA	59.529	45.833	0.00	0.00	0.00	3.10
456	457	5.396213	CCCTCCAATCCAGAACTAAAGAGAG	60.396	48.000	0.00	0.00	0.00	3.20
457	458	5.396213	CCTCCAATCCAGAACTAAAGAGAGG	60.396	48.000	0.00	0.00	0.00	3.69
458	459	5.342017	TCCAATCCAGAACTAAAGAGAGGA	58.658	41.667	0.00	0.00	0.00	3.71
459	460	5.785423	TCCAATCCAGAACTAAAGAGAGGAA	59.215	40.000	0.00	0.00	0.00	3.36
460	461	6.445139	TCCAATCCAGAACTAAAGAGAGGAAT	59.555	38.462	0.00	0.00	0.00	3.01
461	462	7.037297	TCCAATCCAGAACTAAAGAGAGGAATT	60.037	37.037	0.00	0.00	0.00	2.17
462	463	8.267894	CCAATCCAGAACTAAAGAGAGGAATTA	58.732	37.037	0.00	0.00	0.00	1.40
463	464	9.672673	CAATCCAGAACTAAAGAGAGGAATTAA	57.327	33.333	0.00	0.00	0.00	1.40
466	467	9.672673	TCCAGAACTAAAGAGAGGAATTAAATG	57.327	33.333	0.00	0.00	0.00	2.32
467	468	9.672673	CCAGAACTAAAGAGAGGAATTAAATGA	57.327	33.333	0.00	0.00	0.00	2.57
469	470	9.898152	AGAACTAAAGAGAGGAATTAAATGAGG	57.102	33.333	0.00	0.00	0.00	3.86
470	471	9.892130	GAACTAAAGAGAGGAATTAAATGAGGA	57.108	33.333	0.00	0.00	0.00	3.71
471	472	9.898152	AACTAAAGAGAGGAATTAAATGAGGAG	57.102	33.333	0.00	0.00	0.00	3.69
472	473	9.273137	ACTAAAGAGAGGAATTAAATGAGGAGA	57.727	33.333	0.00	0.00	0.00	3.71
473	474	9.762933	CTAAAGAGAGGAATTAAATGAGGAGAG	57.237	37.037	0.00	0.00	0.00	3.20
474	475	7.986553	AAGAGAGGAATTAAATGAGGAGAGA	57.013	36.000	0.00	0.00	0.00	3.10
475	476	7.601705	AGAGAGGAATTAAATGAGGAGAGAG	57.398	40.000	0.00	0.00	0.00	3.20
476	477	7.361438	AGAGAGGAATTAAATGAGGAGAGAGA	58.639	38.462	0.00	0.00	0.00	3.10
477	478	7.506938	AGAGAGGAATTAAATGAGGAGAGAGAG	59.493	40.741	0.00	0.00	0.00	3.20
478	479	7.361438	AGAGGAATTAAATGAGGAGAGAGAGA	58.639	38.462	0.00	0.00	0.00	3.10
479	480	7.506938	AGAGGAATTAAATGAGGAGAGAGAGAG	59.493	40.741	0.00	0.00	0.00	3.20
480	481	6.041979	AGGAATTAAATGAGGAGAGAGAGAGC	59.958	42.308	0.00	0.00	0.00	4.09
481	482	6.041979	GGAATTAAATGAGGAGAGAGAGAGCT	59.958	42.308	0.00	0.00	0.00	4.09
482	483	7.232534	GGAATTAAATGAGGAGAGAGAGAGCTA	59.767	40.741	0.00	0.00	0.00	3.32
483	484	8.546083	AATTAAATGAGGAGAGAGAGAGCTAA	57.454	34.615	0.00	0.00	0.00	3.09
484	485	8.725606	ATTAAATGAGGAGAGAGAGAGCTAAT	57.274	34.615	0.00	0.00	0.00	1.73
485	486	9.821240	ATTAAATGAGGAGAGAGAGAGCTAATA	57.179	33.333	0.00	0.00	0.00	0.98
486	487	7.524717	AAATGAGGAGAGAGAGAGCTAATAC	57.475	40.000	0.00	0.00	0.00	1.89
487	488	5.638530	TGAGGAGAGAGAGAGCTAATACA	57.361	43.478	0.00	0.00	0.00	2.29
488	489	6.199557	TGAGGAGAGAGAGAGCTAATACAT	57.800	41.667	0.00	0.00	0.00	2.29
489	490	7.323052	TGAGGAGAGAGAGAGCTAATACATA	57.677	40.000	0.00	0.00	0.00	2.29
490	491	7.927788	TGAGGAGAGAGAGAGCTAATACATAT	58.072	38.462	0.00	0.00	0.00	1.78
491	492	8.390143	TGAGGAGAGAGAGAGCTAATACATATT	58.610	37.037	0.00	0.00	0.00	1.28
492	493	9.243105	GAGGAGAGAGAGAGCTAATACATATTT	57.757	37.037	0.00	0.00	0.00	1.40
493	494	9.600432	AGGAGAGAGAGAGCTAATACATATTTT	57.400	33.333	0.00	0.00	0.00	1.82
511	512	9.975218	ACATATTTTAGTAGGTTTTCCATGACT	57.025	29.630	0.00	0.00	43.73	3.41
520	521	9.588096	AGTAGGTTTTCCATGACTAAAAGATTT	57.412	29.630	0.00	0.00	43.73	2.17
524	525	9.140286	GGTTTTCCATGACTAAAAGATTTTAGC	57.860	33.333	19.97	14.60	44.42	3.09
538	539	8.785329	AAAGATTTTAGCCTCTCTTTAGTCAG	57.215	34.615	0.00	0.00	36.46	3.51
539	540	6.883744	AGATTTTAGCCTCTCTTTAGTCAGG	58.116	40.000	0.00	0.00	0.00	3.86
540	541	5.422214	TTTTAGCCTCTCTTTAGTCAGGG	57.578	43.478	0.00	0.00	0.00	4.45
541	542	1.872773	AGCCTCTCTTTAGTCAGGGG	58.127	55.000	0.00	0.00	0.00	4.79
542	543	1.079658	AGCCTCTCTTTAGTCAGGGGT	59.920	52.381	0.00	0.00	0.00	4.95
543	544	1.208293	GCCTCTCTTTAGTCAGGGGTG	59.792	57.143	0.00	0.00	0.00	4.61
544	545	1.208293	CCTCTCTTTAGTCAGGGGTGC	59.792	57.143	0.00	0.00	0.00	5.01
545	546	2.183679	CTCTCTTTAGTCAGGGGTGCT	58.816	52.381	0.00	0.00	0.00	4.40
546	547	2.569404	CTCTCTTTAGTCAGGGGTGCTT	59.431	50.000	0.00	0.00	0.00	3.91
547	548	2.303022	TCTCTTTAGTCAGGGGTGCTTG	59.697	50.000	0.00	0.00	0.00	4.01
548	549	2.303022	CTCTTTAGTCAGGGGTGCTTGA	59.697	50.000	0.00	0.00	0.00	3.02
549	550	2.708861	TCTTTAGTCAGGGGTGCTTGAA	59.291	45.455	0.00	0.00	0.00	2.69
550	551	3.137544	TCTTTAGTCAGGGGTGCTTGAAA	59.862	43.478	0.00	0.00	0.00	2.69
551	552	2.561478	TAGTCAGGGGTGCTTGAAAC	57.439	50.000	0.00	0.00	0.00	2.78
552	553	0.846693	AGTCAGGGGTGCTTGAAACT	59.153	50.000	0.00	0.00	0.00	2.66
553	554	1.215423	AGTCAGGGGTGCTTGAAACTT	59.785	47.619	0.00	0.00	0.00	2.66
554	555	2.031870	GTCAGGGGTGCTTGAAACTTT	58.968	47.619	0.00	0.00	0.00	2.66
555	556	3.117663	AGTCAGGGGTGCTTGAAACTTTA	60.118	43.478	0.00	0.00	0.00	1.85
556	557	3.253432	GTCAGGGGTGCTTGAAACTTTAG	59.747	47.826	0.00	0.00	0.00	1.85
557	558	2.029918	CAGGGGTGCTTGAAACTTTAGC	60.030	50.000	0.00	0.00	35.50	3.09
558	559	1.272490	GGGGTGCTTGAAACTTTAGCC	59.728	52.381	0.00	0.00	34.03	3.93
559	560	2.239400	GGGTGCTTGAAACTTTAGCCT	58.761	47.619	0.00	0.00	34.03	4.58
560	561	2.229062	GGGTGCTTGAAACTTTAGCCTC	59.771	50.000	0.00	0.00	34.03	4.70
561	562	3.149981	GGTGCTTGAAACTTTAGCCTCT	58.850	45.455	0.00	0.00	34.03	3.69
562	563	4.324267	GGTGCTTGAAACTTTAGCCTCTA	58.676	43.478	0.00	0.00	34.03	2.43
563	564	4.760204	GGTGCTTGAAACTTTAGCCTCTAA	59.240	41.667	0.00	0.00	34.03	2.10
564	565	5.240844	GGTGCTTGAAACTTTAGCCTCTAAA	59.759	40.000	0.00	0.00	34.03	1.85
565	566	6.238925	GGTGCTTGAAACTTTAGCCTCTAAAA	60.239	38.462	0.00	0.00	34.03	1.52
566	567	7.200455	GTGCTTGAAACTTTAGCCTCTAAAAA	58.800	34.615	0.00	0.00	34.03	1.94
600	601	5.997384	AGTCAGACTAAAAATAGTCCCGT	57.003	39.130	0.00	0.00	45.66	5.28
601	602	5.721232	AGTCAGACTAAAAATAGTCCCGTG	58.279	41.667	0.00	5.29	45.66	4.94
602	603	5.245526	AGTCAGACTAAAAATAGTCCCGTGT	59.754	40.000	0.00	0.00	45.66	4.49
603	604	6.435277	AGTCAGACTAAAAATAGTCCCGTGTA	59.565	38.462	0.00	0.00	45.66	2.90
604	605	7.123847	AGTCAGACTAAAAATAGTCCCGTGTAT	59.876	37.037	0.00	0.00	45.66	2.29
605	606	7.434602	GTCAGACTAAAAATAGTCCCGTGTATC	59.565	40.741	11.35	0.00	45.66	2.24
606	607	6.700520	CAGACTAAAAATAGTCCCGTGTATCC	59.299	42.308	11.35	0.00	45.66	2.59
607	608	6.381994	AGACTAAAAATAGTCCCGTGTATCCA	59.618	38.462	11.35	0.00	45.66	3.41
608	609	6.949715	ACTAAAAATAGTCCCGTGTATCCAA	58.050	36.000	0.00	0.00	0.00	3.53
609	610	7.046033	ACTAAAAATAGTCCCGTGTATCCAAG	58.954	38.462	0.00	0.00	0.00	3.61
610	611	3.470645	AATAGTCCCGTGTATCCAAGC	57.529	47.619	0.00	0.00	0.00	4.01
611	612	1.855295	TAGTCCCGTGTATCCAAGCA	58.145	50.000	0.00	0.00	0.00	3.91
612	613	0.249398	AGTCCCGTGTATCCAAGCAC	59.751	55.000	0.00	0.00	0.00	4.40
613	614	0.743345	GTCCCGTGTATCCAAGCACC	60.743	60.000	0.00	0.00	32.40	5.01
614	615	1.451387	CCCGTGTATCCAAGCACCC	60.451	63.158	0.00	0.00	32.40	4.61
615	616	1.602237	CCGTGTATCCAAGCACCCT	59.398	57.895	0.00	0.00	32.40	4.34
616	617	0.462047	CCGTGTATCCAAGCACCCTC	60.462	60.000	0.00	0.00	32.40	4.30
617	618	0.537188	CGTGTATCCAAGCACCCTCT	59.463	55.000	0.00	0.00	32.40	3.69
618	619	1.754803	CGTGTATCCAAGCACCCTCTA	59.245	52.381	0.00	0.00	32.40	2.43
619	620	2.167693	CGTGTATCCAAGCACCCTCTAA	59.832	50.000	0.00	0.00	32.40	2.10
620	621	3.369052	CGTGTATCCAAGCACCCTCTAAA	60.369	47.826	0.00	0.00	32.40	1.85
621	622	4.585879	GTGTATCCAAGCACCCTCTAAAA	58.414	43.478	0.00	0.00	0.00	1.52
622	623	4.395231	GTGTATCCAAGCACCCTCTAAAAC	59.605	45.833	0.00	0.00	0.00	2.43
623	624	2.178912	TCCAAGCACCCTCTAAAACG	57.821	50.000	0.00	0.00	0.00	3.60
624	625	1.418637	TCCAAGCACCCTCTAAAACGT	59.581	47.619	0.00	0.00	0.00	3.99
625	626	2.633967	TCCAAGCACCCTCTAAAACGTA	59.366	45.455	0.00	0.00	0.00	3.57
626	627	3.262405	TCCAAGCACCCTCTAAAACGTAT	59.738	43.478	0.00	0.00	0.00	3.06
627	628	3.621715	CCAAGCACCCTCTAAAACGTATC	59.378	47.826	0.00	0.00	0.00	2.24
628	629	3.538634	AGCACCCTCTAAAACGTATCC	57.461	47.619	0.00	0.00	0.00	2.59
629	630	2.835764	AGCACCCTCTAAAACGTATCCA	59.164	45.455	0.00	0.00	0.00	3.41
630	631	3.262405	AGCACCCTCTAAAACGTATCCAA	59.738	43.478	0.00	0.00	0.00	3.53
631	632	3.621715	GCACCCTCTAAAACGTATCCAAG	59.378	47.826	0.00	0.00	0.00	3.61
632	633	3.621715	CACCCTCTAAAACGTATCCAAGC	59.378	47.826	0.00	0.00	0.00	4.01
633	634	3.262405	ACCCTCTAAAACGTATCCAAGCA	59.738	43.478	0.00	0.00	0.00	3.91
634	635	4.080526	ACCCTCTAAAACGTATCCAAGCAT	60.081	41.667	0.00	0.00	0.00	3.79
635	636	4.273480	CCCTCTAAAACGTATCCAAGCATG	59.727	45.833	0.00	0.00	0.00	4.06
636	637	4.260784	CCTCTAAAACGTATCCAAGCATGC	60.261	45.833	10.51	10.51	0.00	4.06
637	638	4.513442	TCTAAAACGTATCCAAGCATGCT	58.487	39.130	16.30	16.30	0.00	3.79
638	639	3.764885	AAAACGTATCCAAGCATGCTC	57.235	42.857	22.93	6.18	0.00	4.26
725	748	9.163899	TGAAGAATCACGCTATATACTACTAGG	57.836	37.037	0.00	0.00	0.00	3.02
791	815	2.474561	CATGCATGCACCGACTCTT	58.525	52.632	25.37	0.38	0.00	2.85
908	941	2.401351	GTCACCGGCCGTCTATAAATC	58.599	52.381	26.12	0.55	0.00	2.17
931	966	3.679389	AGAGGATCGCAAATGAACTTGT	58.321	40.909	0.00	0.00	42.67	3.16
967	1002	1.448540	CATCCCCTGACGCAGACAC	60.449	63.158	8.20	0.00	32.44	3.67
1022	1065	4.394712	GAGGTCTGGTGGCCGGTG	62.395	72.222	1.90	0.00	0.00	4.94
1376	1471	8.355913	TGATATGTTGATCTATCTGTGTGAGTC	58.644	37.037	0.00	0.00	0.00	3.36
1449	1568	4.848562	ATGATGATGATTGTGTGGATGC	57.151	40.909	0.00	0.00	0.00	3.91
1453	1572	1.739466	GATGATTGTGTGGATGCGTGT	59.261	47.619	0.00	0.00	0.00	4.49
1496	1619	7.377766	ACACATGTAATTTTATTCGTGCTCT	57.622	32.000	0.00	0.00	0.00	4.09
1497	1620	8.487313	ACACATGTAATTTTATTCGTGCTCTA	57.513	30.769	0.00	0.00	0.00	2.43
1498	1621	9.109393	ACACATGTAATTTTATTCGTGCTCTAT	57.891	29.630	0.00	0.00	0.00	1.98
1499	1622	9.935682	CACATGTAATTTTATTCGTGCTCTATT	57.064	29.630	0.00	0.00	0.00	1.73
1501	1624	9.306280	CATGTAATTTTATTCGTGCTCTATTCG	57.694	33.333	0.00	0.00	0.00	3.34
1502	1625	7.342194	TGTAATTTTATTCGTGCTCTATTCGC	58.658	34.615	0.00	0.00	0.00	4.70
1503	1626	5.984233	ATTTTATTCGTGCTCTATTCGCA	57.016	34.783	0.00	0.00	34.52	5.10
1504	1627	5.788055	TTTTATTCGTGCTCTATTCGCAA	57.212	34.783	0.00	0.00	39.39	4.85
1505	1628	4.772046	TTATTCGTGCTCTATTCGCAAC	57.228	40.909	0.00	0.00	39.39	4.17
1506	1629	2.073117	TTCGTGCTCTATTCGCAACA	57.927	45.000	0.00	0.00	39.39	3.33
1509	1632	2.803386	TCGTGCTCTATTCGCAACAAAA	59.197	40.909	0.00	0.00	39.39	2.44
1510	1633	3.248841	TCGTGCTCTATTCGCAACAAAAA	59.751	39.130	0.00	0.00	39.39	1.94
1702	1844	5.163353	TGCGAACTAATCATTAGACCCATCA	60.163	40.000	11.62	0.00	36.73	3.07
1712	1854	5.296780	TCATTAGACCCATCAAGCGATTTTC	59.703	40.000	0.00	0.00	0.00	2.29
1716	1858	4.524328	AGACCCATCAAGCGATTTTCTTTT	59.476	37.500	0.00	0.00	0.00	2.27
1717	1859	4.809673	ACCCATCAAGCGATTTTCTTTTC	58.190	39.130	0.00	0.00	0.00	2.29
1875	2379	6.300354	TGAACTTTTAGAGCTACAAGTTGC	57.700	37.500	20.41	14.17	42.62	4.17
1921	2479	2.159028	CCAAAGAAAAACCGGCCAAAGA	60.159	45.455	0.00	0.00	0.00	2.52
1922	2480	3.526534	CAAAGAAAAACCGGCCAAAGAA	58.473	40.909	0.00	0.00	0.00	2.52
1923	2481	3.897141	AAGAAAAACCGGCCAAAGAAA	57.103	38.095	0.00	0.00	0.00	2.52
1924	2482	3.452755	AGAAAAACCGGCCAAAGAAAG	57.547	42.857	0.00	0.00	0.00	2.62
1925	2483	1.864711	GAAAAACCGGCCAAAGAAAGC	59.135	47.619	0.00	0.00	0.00	3.51
1926	2484	0.827368	AAAACCGGCCAAAGAAAGCA	59.173	45.000	0.00	0.00	0.00	3.91
1927	2485	0.389025	AAACCGGCCAAAGAAAGCAG	59.611	50.000	0.00	0.00	0.00	4.24
1928	2486	0.467290	AACCGGCCAAAGAAAGCAGA	60.467	50.000	0.00	0.00	0.00	4.26
1929	2487	0.467290	ACCGGCCAAAGAAAGCAGAA	60.467	50.000	0.00	0.00	0.00	3.02
1930	2488	0.673437	CCGGCCAAAGAAAGCAGAAA	59.327	50.000	2.24	0.00	0.00	2.52
2041	2616	5.410439	GGTTGTCGTGGTTAGAATTACACAT	59.590	40.000	0.00	0.00	33.62	3.21
2241	2816	2.150397	AAATAGGGCACTCGCGTATC	57.850	50.000	5.77	0.00	39.92	2.24
2428	3261	2.094390	TCTACTCGGTGGATCCAAAACG	60.094	50.000	18.20	20.62	35.57	3.60

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	2.661718	AGCCTCAAGACTAGTCCTAGC	58.338	52.381	19.38	14.54	36.66	3.42
1	2	6.777213	TTTTAGCCTCAAGACTAGTCCTAG	57.223	41.667	19.38	13.33	39.04	3.02
2	3	7.126733	AGATTTTAGCCTCAAGACTAGTCCTA	58.873	38.462	19.38	9.39	0.00	2.94
3	4	5.961421	AGATTTTAGCCTCAAGACTAGTCCT	59.039	40.000	19.38	10.36	0.00	3.85
4	5	6.228616	AGATTTTAGCCTCAAGACTAGTCC	57.771	41.667	19.38	2.89	0.00	3.85
5	6	8.554835	AAAAGATTTTAGCCTCAAGACTAGTC	57.445	34.615	15.41	15.41	0.00	2.59
6	7	9.660180	CTAAAAGATTTTAGCCTCAAGACTAGT	57.340	33.333	11.10	0.00	41.97	2.57
20	21	8.950007	AGGTTTCCCATGACTAAAAGATTTTA	57.050	30.769	0.00	0.00	0.00	1.52
21	22	7.855784	AGGTTTCCCATGACTAAAAGATTTT	57.144	32.000	0.00	0.00	0.00	1.82
22	23	8.170730	AGTAGGTTTCCCATGACTAAAAGATTT	58.829	33.333	0.00	0.00	0.00	2.17
23	24	7.699878	AGTAGGTTTCCCATGACTAAAAGATT	58.300	34.615	0.00	0.00	0.00	2.40
24	25	7.272144	AGTAGGTTTCCCATGACTAAAAGAT	57.728	36.000	0.00	0.00	0.00	2.40
25	26	6.697641	AGTAGGTTTCCCATGACTAAAAGA	57.302	37.500	0.00	0.00	0.00	2.52
26	27	8.857694	TTTAGTAGGTTTCCCATGACTAAAAG	57.142	34.615	8.74	0.00	38.44	2.27
27	28	9.816787	ATTTTAGTAGGTTTCCCATGACTAAAA	57.183	29.630	19.00	19.00	45.07	1.52
31	32	8.557450	ACATATTTTAGTAGGTTTCCCATGACT	58.443	33.333	0.00	0.00	0.00	3.41
32	33	8.747538	ACATATTTTAGTAGGTTTCCCATGAC	57.252	34.615	0.00	0.00	0.00	3.06
49	50	9.165057	AGGAGAGAGGAAGCTAATACATATTTT	57.835	33.333	0.00	0.00	0.00	1.82
50	51	8.734593	AGGAGAGAGGAAGCTAATACATATTT	57.265	34.615	0.00	0.00	0.00	1.40
51	52	7.952930	TGAGGAGAGAGGAAGCTAATACATATT	59.047	37.037	0.00	0.00	0.00	1.28
52	53	7.474445	TGAGGAGAGAGGAAGCTAATACATAT	58.526	38.462	0.00	0.00	0.00	1.78
53	54	6.853490	TGAGGAGAGAGGAAGCTAATACATA	58.147	40.000	0.00	0.00	0.00	2.29
54	55	5.710646	TGAGGAGAGAGGAAGCTAATACAT	58.289	41.667	0.00	0.00	0.00	2.29
55	56	5.130705	TGAGGAGAGAGGAAGCTAATACA	57.869	43.478	0.00	0.00	0.00	2.29
56	57	6.664428	AATGAGGAGAGAGGAAGCTAATAC	57.336	41.667	0.00	0.00	0.00	1.89
57	58	8.783660	TTAAATGAGGAGAGAGGAAGCTAATA	57.216	34.615	0.00	0.00	0.00	0.98
58	59	7.682787	TTAAATGAGGAGAGAGGAAGCTAAT	57.317	36.000	0.00	0.00	0.00	1.73
59	60	7.682787	ATTAAATGAGGAGAGAGGAAGCTAA	57.317	36.000	0.00	0.00	0.00	3.09
60	61	7.682787	AATTAAATGAGGAGAGAGGAAGCTA	57.317	36.000	0.00	0.00	0.00	3.32
61	62	6.573712	AATTAAATGAGGAGAGAGGAAGCT	57.426	37.500	0.00	0.00	0.00	3.74
62	63	7.053498	AGAAATTAAATGAGGAGAGAGGAAGC	58.947	38.462	0.00	0.00	0.00	3.86
63	64	8.485392	AGAGAAATTAAATGAGGAGAGAGGAAG	58.515	37.037	0.00	0.00	0.00	3.46
64	65	8.386012	AGAGAAATTAAATGAGGAGAGAGGAA	57.614	34.615	0.00	0.00	0.00	3.36
65	66	7.070571	GGAGAGAAATTAAATGAGGAGAGAGGA	59.929	40.741	0.00	0.00	0.00	3.71
66	67	7.071071	AGGAGAGAAATTAAATGAGGAGAGAGG	59.929	40.741	0.00	0.00	0.00	3.69
67	68	8.021898	AGGAGAGAAATTAAATGAGGAGAGAG	57.978	38.462	0.00	0.00	0.00	3.20
68	69	7.986553	AGGAGAGAAATTAAATGAGGAGAGA	57.013	36.000	0.00	0.00	0.00	3.10
69	70	9.762933	CTAAGGAGAGAAATTAAATGAGGAGAG	57.237	37.037	0.00	0.00	0.00	3.20
70	71	9.273137	ACTAAGGAGAGAAATTAAATGAGGAGA	57.727	33.333	0.00	0.00	0.00	3.71
71	72	9.898152	AACTAAGGAGAGAAATTAAATGAGGAG	57.102	33.333	0.00	0.00	0.00	3.69
72	73	9.892130	GAACTAAGGAGAGAAATTAAATGAGGA	57.108	33.333	0.00	0.00	0.00	3.71
73	74	9.898152	AGAACTAAGGAGAGAAATTAAATGAGG	57.102	33.333	0.00	0.00	0.00	3.86
75	76	9.672673	CCAGAACTAAGGAGAGAAATTAAATGA	57.327	33.333	0.00	0.00	0.00	2.57
76	77	9.672673	TCCAGAACTAAGGAGAGAAATTAAATG	57.327	33.333	0.00	0.00	0.00	2.32
79	80	9.672673	CAATCCAGAACTAAGGAGAGAAATTAA	57.327	33.333	0.00	0.00	37.34	1.40
80	81	8.267894	CCAATCCAGAACTAAGGAGAGAAATTA	58.732	37.037	0.00	0.00	37.34	1.40
81	82	7.037297	TCCAATCCAGAACTAAGGAGAGAAATT	60.037	37.037	0.00	0.00	37.34	1.82
82	83	6.445139	TCCAATCCAGAACTAAGGAGAGAAAT	59.555	38.462	0.00	0.00	37.34	2.17
83	84	5.785423	TCCAATCCAGAACTAAGGAGAGAAA	59.215	40.000	0.00	0.00	37.34	2.52
84	85	5.342017	TCCAATCCAGAACTAAGGAGAGAA	58.658	41.667	0.00	0.00	37.34	2.87
85	86	4.947883	TCCAATCCAGAACTAAGGAGAGA	58.052	43.478	0.00	0.00	37.34	3.10
86	87	4.100808	CCTCCAATCCAGAACTAAGGAGAG	59.899	50.000	7.12	0.00	42.87	3.20
87	88	4.033709	CCTCCAATCCAGAACTAAGGAGA	58.966	47.826	7.12	0.00	42.87	3.71
88	89	3.135530	CCCTCCAATCCAGAACTAAGGAG	59.864	52.174	0.00	0.00	40.58	3.69
89	90	3.115390	CCCTCCAATCCAGAACTAAGGA	58.885	50.000	0.00	0.00	38.50	3.36
90	91	2.846827	ACCCTCCAATCCAGAACTAAGG	59.153	50.000	0.00	0.00	0.00	2.69
91	92	4.576330	AACCCTCCAATCCAGAACTAAG	57.424	45.455	0.00	0.00	0.00	2.18
92	93	4.508405	CCAAACCCTCCAATCCAGAACTAA	60.508	45.833	0.00	0.00	0.00	2.24
93	94	3.010138	CCAAACCCTCCAATCCAGAACTA	59.990	47.826	0.00	0.00	0.00	2.24
94	95	2.225117	CCAAACCCTCCAATCCAGAACT	60.225	50.000	0.00	0.00	0.00	3.01
95	96	2.171003	CCAAACCCTCCAATCCAGAAC	58.829	52.381	0.00	0.00	0.00	3.01
96	97	2.041620	CTCCAAACCCTCCAATCCAGAA	59.958	50.000	0.00	0.00	0.00	3.02
97	98	1.635487	CTCCAAACCCTCCAATCCAGA	59.365	52.381	0.00	0.00	0.00	3.86
98	99	1.341383	CCTCCAAACCCTCCAATCCAG	60.341	57.143	0.00	0.00	0.00	3.86
99	100	0.704076	CCTCCAAACCCTCCAATCCA	59.296	55.000	0.00	0.00	0.00	3.41
100	101	0.999712	TCCTCCAAACCCTCCAATCC	59.000	55.000	0.00	0.00	0.00	3.01
101	102	4.519906	TTATCCTCCAAACCCTCCAATC	57.480	45.455	0.00	0.00	0.00	2.67
102	103	6.606241	TTATTATCCTCCAAACCCTCCAAT	57.394	37.500	0.00	0.00	0.00	3.16
103	104	6.410222	TTTATTATCCTCCAAACCCTCCAA	57.590	37.500	0.00	0.00	0.00	3.53
104	105	6.372931	CATTTATTATCCTCCAAACCCTCCA	58.627	40.000	0.00	0.00	0.00	3.86
105	106	5.243954	GCATTTATTATCCTCCAAACCCTCC	59.756	44.000	0.00	0.00	0.00	4.30
106	107	6.071320	AGCATTTATTATCCTCCAAACCCTC	58.929	40.000	0.00	0.00	0.00	4.30
107	108	6.030727	AGCATTTATTATCCTCCAAACCCT	57.969	37.500	0.00	0.00	0.00	4.34
108	109	5.833131	TGAGCATTTATTATCCTCCAAACCC	59.167	40.000	0.00	0.00	0.00	4.11
109	110	6.959639	TGAGCATTTATTATCCTCCAAACC	57.040	37.500	0.00	0.00	0.00	3.27
112	113	9.866655	AGTTATTGAGCATTTATTATCCTCCAA	57.133	29.630	0.00	0.00	0.00	3.53
145	146	8.204836	GCTTGGATCCAAATACTAAAGAGACTA	58.795	37.037	26.87	0.00	35.33	2.59
146	147	7.051000	GCTTGGATCCAAATACTAAAGAGACT	58.949	38.462	26.87	0.00	35.33	3.24
147	148	6.823689	TGCTTGGATCCAAATACTAAAGAGAC	59.176	38.462	26.87	8.83	35.33	3.36
148	149	6.957631	TGCTTGGATCCAAATACTAAAGAGA	58.042	36.000	26.87	1.15	35.33	3.10
149	150	7.255381	CCATGCTTGGATCCAAATACTAAAGAG	60.255	40.741	26.87	12.80	46.92	2.85
150	151	6.547141	CCATGCTTGGATCCAAATACTAAAGA	59.453	38.462	26.87	1.90	46.92	2.52
151	152	6.239120	CCCATGCTTGGATCCAAATACTAAAG	60.239	42.308	26.87	14.21	46.92	1.85
152	153	5.598005	CCCATGCTTGGATCCAAATACTAAA	59.402	40.000	26.87	8.81	46.92	1.85
153	154	5.139727	CCCATGCTTGGATCCAAATACTAA	58.860	41.667	26.87	10.11	46.92	2.24
154	155	4.167892	ACCCATGCTTGGATCCAAATACTA	59.832	41.667	26.87	12.31	46.92	1.82
155	156	3.052642	ACCCATGCTTGGATCCAAATACT	60.053	43.478	26.87	10.16	46.92	2.12
156	157	3.068590	CACCCATGCTTGGATCCAAATAC	59.931	47.826	26.87	19.00	46.92	1.89
157	158	3.053019	TCACCCATGCTTGGATCCAAATA	60.053	43.478	26.87	18.63	46.92	1.40
158	159	2.112998	CACCCATGCTTGGATCCAAAT	58.887	47.619	26.87	16.27	46.92	2.32
159	160	1.076841	TCACCCATGCTTGGATCCAAA	59.923	47.619	26.87	14.63	46.92	3.28
160	161	0.703488	TCACCCATGCTTGGATCCAA	59.297	50.000	25.53	25.53	46.92	3.53
161	162	0.256752	CTCACCCATGCTTGGATCCA	59.743	55.000	19.85	11.44	46.92	3.41
162	163	0.548031	TCTCACCCATGCTTGGATCC	59.452	55.000	19.85	4.20	46.92	3.36
163	164	1.211457	AGTCTCACCCATGCTTGGATC	59.789	52.381	19.85	3.99	46.92	3.36
164	165	1.293062	AGTCTCACCCATGCTTGGAT	58.707	50.000	19.85	0.00	46.92	3.41
165	166	1.833630	CTAGTCTCACCCATGCTTGGA	59.166	52.381	19.85	0.00	46.92	3.53
166	167	1.745141	GCTAGTCTCACCCATGCTTGG	60.745	57.143	11.68	11.68	43.23	3.61
167	168	1.065926	TGCTAGTCTCACCCATGCTTG	60.066	52.381	0.00	0.00	0.00	4.01
168	169	1.279496	TGCTAGTCTCACCCATGCTT	58.721	50.000	0.00	0.00	0.00	3.91
169	170	1.209019	CTTGCTAGTCTCACCCATGCT	59.791	52.381	0.00	0.00	0.00	3.79
170	171	1.065854	ACTTGCTAGTCTCACCCATGC	60.066	52.381	0.00	0.00	0.00	4.06
171	172	3.340814	AACTTGCTAGTCTCACCCATG	57.659	47.619	0.07	0.00	31.99	3.66
172	173	4.373156	AAAACTTGCTAGTCTCACCCAT	57.627	40.909	0.07	0.00	31.99	4.00
173	174	3.857157	AAAACTTGCTAGTCTCACCCA	57.143	42.857	0.07	0.00	31.99	4.51
174	175	4.895961	ACTAAAACTTGCTAGTCTCACCC	58.104	43.478	0.07	0.00	31.99	4.61
175	176	4.930405	GGACTAAAACTTGCTAGTCTCACC	59.070	45.833	0.07	0.00	42.42	4.02
176	177	4.930405	GGGACTAAAACTTGCTAGTCTCAC	59.070	45.833	0.07	0.00	42.76	3.51
177	178	5.148651	GGGACTAAAACTTGCTAGTCTCA	57.851	43.478	0.07	0.00	42.76	3.27
178	179	4.930405	GTGGGACTAAAACTTGCTAGTCTC	59.070	45.833	0.07	1.39	43.29	3.36
179	180	4.593634	AGTGGGACTAAAACTTGCTAGTCT	59.406	41.667	0.07	0.00	42.42	3.24
180	181	4.895961	AGTGGGACTAAAACTTGCTAGTC	58.104	43.478	0.07	0.62	42.17	2.59
181	182	4.976540	AGTGGGACTAAAACTTGCTAGT	57.023	40.909	0.00	0.00	35.68	2.57
182	183	6.038997	AGTAGTGGGACTAAAACTTGCTAG	57.961	41.667	0.00	0.00	31.62	3.42
183	184	6.429521	AAGTAGTGGGACTAAAACTTGCTA	57.570	37.500	0.00	0.00	31.62	3.49
184	185	4.976540	AGTAGTGGGACTAAAACTTGCT	57.023	40.909	0.00	0.00	31.62	3.91
185	186	6.387041	AAAAGTAGTGGGACTAAAACTTGC	57.613	37.500	0.00	0.00	31.62	4.01
186	187	8.672823	ACTAAAAGTAGTGGGACTAAAACTTG	57.327	34.615	0.00	0.00	39.20	3.16
187	188	8.488668	TGACTAAAAGTAGTGGGACTAAAACTT	58.511	33.333	0.00	0.00	40.82	2.66
188	189	8.026396	TGACTAAAAGTAGTGGGACTAAAACT	57.974	34.615	0.00	0.00	40.82	2.66
189	190	8.718734	CATGACTAAAAGTAGTGGGACTAAAAC	58.281	37.037	0.00	0.00	40.82	2.43
190	191	7.881232	CCATGACTAAAAGTAGTGGGACTAAAA	59.119	37.037	0.00	0.00	40.82	1.52
191	192	7.391620	CCATGACTAAAAGTAGTGGGACTAAA	58.608	38.462	0.00	0.00	40.82	1.85
192	193	6.942976	CCATGACTAAAAGTAGTGGGACTAA	58.057	40.000	0.00	0.00	40.82	2.24
193	194	6.540438	CCATGACTAAAAGTAGTGGGACTA	57.460	41.667	0.00	0.00	40.82	2.59
194	195	5.422214	CCATGACTAAAAGTAGTGGGACT	57.578	43.478	0.00	0.00	40.82	3.85
197	198	4.514401	GTCCCATGACTAAAAGTAGTGGG	58.486	47.826	17.22	17.22	46.41	4.61
210	211	8.697292	ACTAAAATCTAGTCTTAGTCCCATGAC	58.303	37.037	0.00	0.00	42.09	3.06
211	212	8.840200	ACTAAAATCTAGTCTTAGTCCCATGA	57.160	34.615	0.00	0.00	31.73	3.07
233	234	8.204836	GCTTGGATCCAAATACTAAAGAGACTA	58.795	37.037	26.87	0.00	35.33	2.59
234	235	7.051000	GCTTGGATCCAAATACTAAAGAGACT	58.949	38.462	26.87	0.00	35.33	3.24
235	236	6.823689	TGCTTGGATCCAAATACTAAAGAGAC	59.176	38.462	26.87	8.83	35.33	3.36
236	237	6.957631	TGCTTGGATCCAAATACTAAAGAGA	58.042	36.000	26.87	1.15	35.33	3.10
237	238	7.255381	CCATGCTTGGATCCAAATACTAAAGAG	60.255	40.741	26.87	12.80	46.92	2.85
238	239	6.547141	CCATGCTTGGATCCAAATACTAAAGA	59.453	38.462	26.87	1.90	46.92	2.52
239	240	6.239120	CCCATGCTTGGATCCAAATACTAAAG	60.239	42.308	26.87	14.21	46.92	1.85
240	241	5.598005	CCCATGCTTGGATCCAAATACTAAA	59.402	40.000	26.87	8.81	46.92	1.85
241	242	5.139727	CCCATGCTTGGATCCAAATACTAA	58.860	41.667	26.87	10.11	46.92	2.24
242	243	4.167892	ACCCATGCTTGGATCCAAATACTA	59.832	41.667	26.87	12.31	46.92	1.82
243	244	3.052642	ACCCATGCTTGGATCCAAATACT	60.053	43.478	26.87	10.16	46.92	2.12
244	245	3.068590	CACCCATGCTTGGATCCAAATAC	59.931	47.826	26.87	19.00	46.92	1.89
245	246	3.053019	TCACCCATGCTTGGATCCAAATA	60.053	43.478	26.87	18.63	46.92	1.40
246	247	2.112998	CACCCATGCTTGGATCCAAAT	58.887	47.619	26.87	16.27	46.92	2.32
247	248	1.076841	TCACCCATGCTTGGATCCAAA	59.923	47.619	26.87	14.63	46.92	3.28
248	249	0.703488	TCACCCATGCTTGGATCCAA	59.297	50.000	25.53	25.53	46.92	3.53
249	250	0.256752	CTCACCCATGCTTGGATCCA	59.743	55.000	19.85	11.44	46.92	3.41
250	251	0.548031	TCTCACCCATGCTTGGATCC	59.452	55.000	19.85	4.20	46.92	3.36
251	252	1.211457	AGTCTCACCCATGCTTGGATC	59.789	52.381	19.85	3.99	46.92	3.36
252	253	1.293062	AGTCTCACCCATGCTTGGAT	58.707	50.000	19.85	0.00	46.92	3.41
253	254	1.833630	CTAGTCTCACCCATGCTTGGA	59.166	52.381	19.85	0.00	46.92	3.53
254	255	1.745141	GCTAGTCTCACCCATGCTTGG	60.745	57.143	11.68	11.68	43.23	3.61
255	256	1.065926	TGCTAGTCTCACCCATGCTTG	60.066	52.381	0.00	0.00	0.00	4.01
256	257	1.279496	TGCTAGTCTCACCCATGCTT	58.721	50.000	0.00	0.00	0.00	3.91
257	258	1.209019	CTTGCTAGTCTCACCCATGCT	59.791	52.381	0.00	0.00	0.00	3.79
258	259	1.065854	ACTTGCTAGTCTCACCCATGC	60.066	52.381	0.00	0.00	0.00	4.06
259	260	3.340814	AACTTGCTAGTCTCACCCATG	57.659	47.619	0.07	0.00	31.99	3.66
260	261	4.373156	AAAACTTGCTAGTCTCACCCAT	57.627	40.909	0.07	0.00	31.99	4.00
261	262	3.857157	AAAACTTGCTAGTCTCACCCA	57.143	42.857	0.07	0.00	31.99	4.51
262	263	4.895961	ACTAAAACTTGCTAGTCTCACCC	58.104	43.478	0.07	0.00	31.99	4.61
263	264	4.930405	GGACTAAAACTTGCTAGTCTCACC	59.070	45.833	0.07	0.00	42.42	4.02
264	265	4.930405	GGGACTAAAACTTGCTAGTCTCAC	59.070	45.833	0.07	0.00	42.76	3.51
265	266	5.148651	GGGACTAAAACTTGCTAGTCTCA	57.851	43.478	0.07	0.00	42.76	3.27
266	267	4.930405	GTGGGACTAAAACTTGCTAGTCTC	59.070	45.833	0.07	1.39	43.29	3.36
267	268	4.593634	AGTGGGACTAAAACTTGCTAGTCT	59.406	41.667	0.07	0.00	42.42	3.24
268	269	4.895961	AGTGGGACTAAAACTTGCTAGTC	58.104	43.478	0.07	0.62	42.17	2.59
269	270	4.976540	AGTGGGACTAAAACTTGCTAGT	57.023	40.909	0.00	0.00	35.68	2.57
270	271	6.038997	AGTAGTGGGACTAAAACTTGCTAG	57.961	41.667	0.00	0.00	31.62	3.42
271	272	6.429521	AAGTAGTGGGACTAAAACTTGCTA	57.570	37.500	0.00	0.00	31.62	3.49
272	273	4.976540	AGTAGTGGGACTAAAACTTGCT	57.023	40.909	0.00	0.00	31.62	3.91
273	274	6.387041	AAAAGTAGTGGGACTAAAACTTGC	57.613	37.500	0.00	0.00	31.62	4.01
274	275	8.672823	ACTAAAAGTAGTGGGACTAAAACTTG	57.327	34.615	0.00	0.00	39.20	3.16
275	276	8.488668	TGACTAAAAGTAGTGGGACTAAAACTT	58.511	33.333	0.00	0.00	40.82	2.66
276	277	8.026396	TGACTAAAAGTAGTGGGACTAAAACT	57.974	34.615	0.00	0.00	40.82	2.66
277	278	8.718734	CATGACTAAAAGTAGTGGGACTAAAAC	58.281	37.037	0.00	0.00	40.82	2.43
278	279	7.881232	CCATGACTAAAAGTAGTGGGACTAAAA	59.119	37.037	0.00	0.00	40.82	1.52
279	280	7.391620	CCATGACTAAAAGTAGTGGGACTAAA	58.608	38.462	0.00	0.00	40.82	1.85
280	281	6.942976	CCATGACTAAAAGTAGTGGGACTAA	58.057	40.000	0.00	0.00	40.82	2.24
281	282	6.540438	CCATGACTAAAAGTAGTGGGACTA	57.460	41.667	0.00	0.00	40.82	2.59
282	283	5.422214	CCATGACTAAAAGTAGTGGGACT	57.578	43.478	0.00	0.00	40.82	3.85
285	286	4.514401	GTCCCATGACTAAAAGTAGTGGG	58.486	47.826	17.22	17.22	46.41	4.61
297	298	6.575496	AAGAGCATGTCTTAGTCCCATGACT	61.575	44.000	8.28	0.44	44.26	3.41
298	299	3.133721	AGAGCATGTCTTAGTCCCATGAC	59.866	47.826	0.00	0.00	38.56	3.06
299	300	3.378512	AGAGCATGTCTTAGTCCCATGA	58.621	45.455	0.00	0.00	38.56	3.07
300	301	3.834489	AGAGCATGTCTTAGTCCCATG	57.166	47.619	0.00	0.00	39.13	3.66
308	309	4.962362	TCATGGGACTAAGAGCATGTCTTA	59.038	41.667	13.56	13.56	44.26	2.10
309	310	4.383552	GTCATGGGACTAAGAGCATGTCTT	60.384	45.833	12.93	12.93	40.51	3.01
310	311	3.133721	GTCATGGGACTAAGAGCATGTCT	59.866	47.826	0.00	0.00	40.99	3.41
311	312	3.462021	GTCATGGGACTAAGAGCATGTC	58.538	50.000	0.00	0.00	40.99	3.06
312	313	3.550437	GTCATGGGACTAAGAGCATGT	57.450	47.619	0.00	0.00	40.99	3.21
325	326	4.225267	AGTCCCACTACTTTTAGTCATGGG	59.775	45.833	16.70	16.70	46.94	4.00
326	327	5.422214	AGTCCCACTACTTTTAGTCATGG	57.578	43.478	0.00	0.00	36.31	3.66
327	328	8.718734	GTTTTAGTCCCACTACTTTTAGTCATG	58.281	37.037	0.00	0.00	36.31	3.07
328	329	8.657712	AGTTTTAGTCCCACTACTTTTAGTCAT	58.342	33.333	0.00	0.00	36.31	3.06
329	330	8.026396	AGTTTTAGTCCCACTACTTTTAGTCA	57.974	34.615	0.00	0.00	36.31	3.41
330	331	8.771766	CAAGTTTTAGTCCCACTACTTTTAGTC	58.228	37.037	0.00	0.00	36.31	2.59
331	332	7.228108	GCAAGTTTTAGTCCCACTACTTTTAGT	59.772	37.037	0.00	0.00	39.30	2.24
332	333	7.444487	AGCAAGTTTTAGTCCCACTACTTTTAG	59.556	37.037	0.00	0.00	28.93	1.85
333	334	7.284820	AGCAAGTTTTAGTCCCACTACTTTTA	58.715	34.615	0.00	0.00	28.93	1.52
334	335	6.127101	AGCAAGTTTTAGTCCCACTACTTTT	58.873	36.000	0.00	0.00	28.93	2.27
335	336	5.691896	AGCAAGTTTTAGTCCCACTACTTT	58.308	37.500	0.00	0.00	28.93	2.66
336	337	5.306114	AGCAAGTTTTAGTCCCACTACTT	57.694	39.130	0.00	0.00	28.93	2.24
337	338	4.976540	AGCAAGTTTTAGTCCCACTACT	57.023	40.909	0.00	0.00	28.93	2.57
338	339	5.791666	ACTAGCAAGTTTTAGTCCCACTAC	58.208	41.667	0.00	0.00	27.15	2.73
339	340	5.778750	AGACTAGCAAGTTTTAGTCCCACTA	59.221	40.000	15.72	0.00	44.32	2.74
340	341	4.593634	AGACTAGCAAGTTTTAGTCCCACT	59.406	41.667	15.72	1.62	44.32	4.00
341	342	4.895961	AGACTAGCAAGTTTTAGTCCCAC	58.104	43.478	15.72	0.00	44.32	4.61
342	343	4.591498	TGAGACTAGCAAGTTTTAGTCCCA	59.409	41.667	15.72	10.61	44.32	4.37
343	344	4.930405	GTGAGACTAGCAAGTTTTAGTCCC	59.070	45.833	15.72	8.76	44.32	4.46
344	345	4.930405	GGTGAGACTAGCAAGTTTTAGTCC	59.070	45.833	15.72	10.59	44.32	3.85
345	346	4.930405	GGGTGAGACTAGCAAGTTTTAGTC	59.070	45.833	13.08	13.08	43.83	2.59
346	347	4.347000	TGGGTGAGACTAGCAAGTTTTAGT	59.653	41.667	0.00	0.00	35.56	2.24
347	348	4.894784	TGGGTGAGACTAGCAAGTTTTAG	58.105	43.478	0.00	0.00	35.56	1.85
348	349	4.967084	TGGGTGAGACTAGCAAGTTTTA	57.033	40.909	0.00	0.00	35.56	1.52
349	350	3.857157	TGGGTGAGACTAGCAAGTTTT	57.143	42.857	0.00	0.00	35.56	2.43
350	351	3.679389	CATGGGTGAGACTAGCAAGTTT	58.321	45.455	0.00	0.00	35.56	2.66
351	352	2.616510	GCATGGGTGAGACTAGCAAGTT	60.617	50.000	0.00	0.00	35.56	2.66
352	353	1.065854	GCATGGGTGAGACTAGCAAGT	60.066	52.381	0.00	0.00	39.21	3.16
353	354	1.209019	AGCATGGGTGAGACTAGCAAG	59.791	52.381	0.00	0.00	0.00	4.01
354	355	1.279496	AGCATGGGTGAGACTAGCAA	58.721	50.000	0.00	0.00	0.00	3.91
355	356	1.065926	CAAGCATGGGTGAGACTAGCA	60.066	52.381	0.00	0.00	0.00	3.49
356	357	1.661341	CAAGCATGGGTGAGACTAGC	58.339	55.000	0.00	0.00	0.00	3.42
357	358	2.322355	CCAAGCATGGGTGAGACTAG	57.678	55.000	0.00	0.00	43.51	2.57
368	369	7.500227	TCTCTTTAGTATTTGGATCCAAGCATG	59.500	37.037	25.69	12.43	37.24	4.06
369	370	7.500559	GTCTCTTTAGTATTTGGATCCAAGCAT	59.499	37.037	25.69	19.69	37.24	3.79
370	371	6.823689	GTCTCTTTAGTATTTGGATCCAAGCA	59.176	38.462	25.69	14.00	37.24	3.91
371	372	7.051000	AGTCTCTTTAGTATTTGGATCCAAGC	58.949	38.462	25.69	19.18	37.24	4.01
404	405	9.866655	TTGGAGGATAATAAATGCTCAATAACT	57.133	29.630	8.48	0.00	38.10	2.24
407	408	9.077885	GGTTTGGAGGATAATAAATGCTCAATA	57.922	33.333	8.48	0.00	38.10	1.90
408	409	7.015584	GGGTTTGGAGGATAATAAATGCTCAAT	59.984	37.037	8.48	0.00	38.10	2.57
409	410	6.323739	GGGTTTGGAGGATAATAAATGCTCAA	59.676	38.462	8.48	0.00	38.10	3.02
410	411	5.833131	GGGTTTGGAGGATAATAAATGCTCA	59.167	40.000	8.48	0.00	38.10	4.26
411	412	6.071320	AGGGTTTGGAGGATAATAAATGCTC	58.929	40.000	0.00	0.00	36.02	4.26
412	413	6.030727	AGGGTTTGGAGGATAATAAATGCT	57.969	37.500	0.00	0.00	0.00	3.79
413	414	5.243954	GGAGGGTTTGGAGGATAATAAATGC	59.756	44.000	0.00	0.00	0.00	3.56
414	415	6.372931	TGGAGGGTTTGGAGGATAATAAATG	58.627	40.000	0.00	0.00	0.00	2.32
415	416	6.606241	TGGAGGGTTTGGAGGATAATAAAT	57.394	37.500	0.00	0.00	0.00	1.40
416	417	6.410222	TTGGAGGGTTTGGAGGATAATAAA	57.590	37.500	0.00	0.00	0.00	1.40
417	418	6.411554	GGATTGGAGGGTTTGGAGGATAATAA	60.412	42.308	0.00	0.00	0.00	1.40
418	419	5.074515	GGATTGGAGGGTTTGGAGGATAATA	59.925	44.000	0.00	0.00	0.00	0.98
419	420	4.140924	GGATTGGAGGGTTTGGAGGATAAT	60.141	45.833	0.00	0.00	0.00	1.28
420	421	3.204382	GGATTGGAGGGTTTGGAGGATAA	59.796	47.826	0.00	0.00	0.00	1.75
421	422	2.783510	GGATTGGAGGGTTTGGAGGATA	59.216	50.000	0.00	0.00	0.00	2.59
422	423	1.570979	GGATTGGAGGGTTTGGAGGAT	59.429	52.381	0.00	0.00	0.00	3.24
423	424	0.999712	GGATTGGAGGGTTTGGAGGA	59.000	55.000	0.00	0.00	0.00	3.71
424	425	0.704076	TGGATTGGAGGGTTTGGAGG	59.296	55.000	0.00	0.00	0.00	4.30
425	426	1.635487	TCTGGATTGGAGGGTTTGGAG	59.365	52.381	0.00	0.00	0.00	3.86
426	427	1.753903	TCTGGATTGGAGGGTTTGGA	58.246	50.000	0.00	0.00	0.00	3.53
427	428	2.171003	GTTCTGGATTGGAGGGTTTGG	58.829	52.381	0.00	0.00	0.00	3.28
428	429	3.160679	AGTTCTGGATTGGAGGGTTTG	57.839	47.619	0.00	0.00	0.00	2.93
429	430	5.074515	TCTTTAGTTCTGGATTGGAGGGTTT	59.925	40.000	0.00	0.00	0.00	3.27
430	431	4.601857	TCTTTAGTTCTGGATTGGAGGGTT	59.398	41.667	0.00	0.00	0.00	4.11
431	432	4.175962	TCTTTAGTTCTGGATTGGAGGGT	58.824	43.478	0.00	0.00	0.00	4.34
432	433	4.471386	TCTCTTTAGTTCTGGATTGGAGGG	59.529	45.833	0.00	0.00	0.00	4.30
433	434	5.396213	CCTCTCTTTAGTTCTGGATTGGAGG	60.396	48.000	0.00	0.00	0.00	4.30
434	435	5.423610	TCCTCTCTTTAGTTCTGGATTGGAG	59.576	44.000	0.00	0.00	0.00	3.86
435	436	5.342017	TCCTCTCTTTAGTTCTGGATTGGA	58.658	41.667	0.00	0.00	0.00	3.53
436	437	5.683876	TCCTCTCTTTAGTTCTGGATTGG	57.316	43.478	0.00	0.00	0.00	3.16
437	438	9.672673	TTAATTCCTCTCTTTAGTTCTGGATTG	57.327	33.333	0.00	0.00	0.00	2.67
440	441	9.672673	CATTTAATTCCTCTCTTTAGTTCTGGA	57.327	33.333	0.00	0.00	0.00	3.86
441	442	9.672673	TCATTTAATTCCTCTCTTTAGTTCTGG	57.327	33.333	0.00	0.00	0.00	3.86
443	444	9.898152	CCTCATTTAATTCCTCTCTTTAGTTCT	57.102	33.333	0.00	0.00	0.00	3.01
444	445	9.892130	TCCTCATTTAATTCCTCTCTTTAGTTC	57.108	33.333	0.00	0.00	0.00	3.01
445	446	9.898152	CTCCTCATTTAATTCCTCTCTTTAGTT	57.102	33.333	0.00	0.00	0.00	2.24
446	447	9.273137	TCTCCTCATTTAATTCCTCTCTTTAGT	57.727	33.333	0.00	0.00	0.00	2.24
447	448	9.762933	CTCTCCTCATTTAATTCCTCTCTTTAG	57.237	37.037	0.00	0.00	0.00	1.85
448	449	9.494055	TCTCTCCTCATTTAATTCCTCTCTTTA	57.506	33.333	0.00	0.00	0.00	1.85
449	450	8.386012	TCTCTCCTCATTTAATTCCTCTCTTT	57.614	34.615	0.00	0.00	0.00	2.52
450	451	7.843760	TCTCTCTCCTCATTTAATTCCTCTCTT	59.156	37.037	0.00	0.00	0.00	2.85
451	452	7.361438	TCTCTCTCCTCATTTAATTCCTCTCT	58.639	38.462	0.00	0.00	0.00	3.10
452	453	7.505585	TCTCTCTCTCCTCATTTAATTCCTCTC	59.494	40.741	0.00	0.00	0.00	3.20
453	454	7.361438	TCTCTCTCTCCTCATTTAATTCCTCT	58.639	38.462	0.00	0.00	0.00	3.69
454	455	7.595819	TCTCTCTCTCCTCATTTAATTCCTC	57.404	40.000	0.00	0.00	0.00	3.71
455	456	6.041979	GCTCTCTCTCTCCTCATTTAATTCCT	59.958	42.308	0.00	0.00	0.00	3.36
456	457	6.041979	AGCTCTCTCTCTCCTCATTTAATTCC	59.958	42.308	0.00	0.00	0.00	3.01
457	458	7.054491	AGCTCTCTCTCTCCTCATTTAATTC	57.946	40.000	0.00	0.00	0.00	2.17
458	459	8.546083	TTAGCTCTCTCTCTCCTCATTTAATT	57.454	34.615	0.00	0.00	0.00	1.40
459	460	8.725606	ATTAGCTCTCTCTCTCCTCATTTAAT	57.274	34.615	0.00	0.00	0.00	1.40
460	461	9.073475	GTATTAGCTCTCTCTCTCCTCATTTAA	57.927	37.037	0.00	0.00	0.00	1.52
461	462	8.221251	TGTATTAGCTCTCTCTCTCCTCATTTA	58.779	37.037	0.00	0.00	0.00	1.40
462	463	7.066142	TGTATTAGCTCTCTCTCTCCTCATTT	58.934	38.462	0.00	0.00	0.00	2.32
463	464	6.609876	TGTATTAGCTCTCTCTCTCCTCATT	58.390	40.000	0.00	0.00	0.00	2.57
464	465	6.199557	TGTATTAGCTCTCTCTCTCCTCAT	57.800	41.667	0.00	0.00	0.00	2.90
465	466	5.638530	TGTATTAGCTCTCTCTCTCCTCA	57.361	43.478	0.00	0.00	0.00	3.86
466	467	8.807948	AATATGTATTAGCTCTCTCTCTCCTC	57.192	38.462	0.00	0.00	0.00	3.71
467	468	9.600432	AAAATATGTATTAGCTCTCTCTCTCCT	57.400	33.333	0.00	0.00	0.00	3.69
485	486	9.975218	AGTCATGGAAAACCTACTAAAATATGT	57.025	29.630	0.00	0.00	0.00	2.29
494	495	9.588096	AAATCTTTTAGTCATGGAAAACCTACT	57.412	29.630	0.00	0.00	0.00	2.57
512	513	9.225436	CTGACTAAAGAGAGGCTAAAATCTTTT	57.775	33.333	16.64	5.40	41.13	2.27
513	514	7.826744	CCTGACTAAAGAGAGGCTAAAATCTTT	59.173	37.037	16.04	16.04	42.83	2.52
514	515	7.334858	CCTGACTAAAGAGAGGCTAAAATCTT	58.665	38.462	0.00	0.00	33.51	2.40
515	516	6.126911	CCCTGACTAAAGAGAGGCTAAAATCT	60.127	42.308	0.00	0.00	0.00	2.40
516	517	6.052360	CCCTGACTAAAGAGAGGCTAAAATC	58.948	44.000	0.00	0.00	0.00	2.17
517	518	5.104318	CCCCTGACTAAAGAGAGGCTAAAAT	60.104	44.000	0.00	0.00	0.00	1.82
518	519	4.225267	CCCCTGACTAAAGAGAGGCTAAAA	59.775	45.833	0.00	0.00	0.00	1.52
519	520	3.775316	CCCCTGACTAAAGAGAGGCTAAA	59.225	47.826	0.00	0.00	0.00	1.85
520	521	3.246021	ACCCCTGACTAAAGAGAGGCTAA	60.246	47.826	0.00	0.00	0.00	3.09
521	522	2.315155	ACCCCTGACTAAAGAGAGGCTA	59.685	50.000	0.00	0.00	0.00	3.93
522	523	1.079658	ACCCCTGACTAAAGAGAGGCT	59.920	52.381	0.00	0.00	0.00	4.58
523	524	1.208293	CACCCCTGACTAAAGAGAGGC	59.792	57.143	0.00	0.00	0.00	4.70
524	525	1.208293	GCACCCCTGACTAAAGAGAGG	59.792	57.143	0.00	0.00	0.00	3.69
525	526	2.183679	AGCACCCCTGACTAAAGAGAG	58.816	52.381	0.00	0.00	0.00	3.20
526	527	2.303022	CAAGCACCCCTGACTAAAGAGA	59.697	50.000	0.00	0.00	0.00	3.10
527	528	2.303022	TCAAGCACCCCTGACTAAAGAG	59.697	50.000	0.00	0.00	0.00	2.85
528	529	2.334977	TCAAGCACCCCTGACTAAAGA	58.665	47.619	0.00	0.00	0.00	2.52
529	530	2.859165	TCAAGCACCCCTGACTAAAG	57.141	50.000	0.00	0.00	0.00	1.85
530	531	3.117663	AGTTTCAAGCACCCCTGACTAAA	60.118	43.478	0.00	0.00	0.00	1.85
531	532	2.441750	AGTTTCAAGCACCCCTGACTAA	59.558	45.455	0.00	0.00	0.00	2.24
532	533	2.054799	AGTTTCAAGCACCCCTGACTA	58.945	47.619	0.00	0.00	0.00	2.59
533	534	0.846693	AGTTTCAAGCACCCCTGACT	59.153	50.000	0.00	0.00	0.00	3.41
534	535	1.692411	AAGTTTCAAGCACCCCTGAC	58.308	50.000	0.00	0.00	0.00	3.51
535	536	2.452600	AAAGTTTCAAGCACCCCTGA	57.547	45.000	0.00	0.00	0.00	3.86
536	537	2.029918	GCTAAAGTTTCAAGCACCCCTG	60.030	50.000	5.64	0.00	36.26	4.45
537	538	2.239400	GCTAAAGTTTCAAGCACCCCT	58.761	47.619	5.64	0.00	36.26	4.79
538	539	1.272490	GGCTAAAGTTTCAAGCACCCC	59.728	52.381	11.51	0.00	38.01	4.95
539	540	2.229062	GAGGCTAAAGTTTCAAGCACCC	59.771	50.000	11.51	0.00	38.01	4.61
540	541	3.149981	AGAGGCTAAAGTTTCAAGCACC	58.850	45.455	11.51	3.82	38.01	5.01
541	542	5.941948	TTAGAGGCTAAAGTTTCAAGCAC	57.058	39.130	11.51	5.94	38.01	4.40
542	543	6.952773	TTTTAGAGGCTAAAGTTTCAAGCA	57.047	33.333	11.51	0.00	38.01	3.91
575	576	7.816031	CACGGGACTATTTTTAGTCTGACTAAA	59.184	37.037	29.65	29.65	45.78	1.85
576	577	7.039504	ACACGGGACTATTTTTAGTCTGACTAA	60.040	37.037	22.80	22.80	44.35	2.24
577	578	6.435277	ACACGGGACTATTTTTAGTCTGACTA	59.565	38.462	13.34	13.34	44.35	2.59
578	579	5.245526	ACACGGGACTATTTTTAGTCTGACT	59.754	40.000	15.57	15.57	44.35	3.41
579	580	5.476614	ACACGGGACTATTTTTAGTCTGAC	58.523	41.667	11.69	0.00	44.35	3.51
580	581	5.733620	ACACGGGACTATTTTTAGTCTGA	57.266	39.130	11.69	0.00	44.35	3.27
581	582	6.700520	GGATACACGGGACTATTTTTAGTCTG	59.299	42.308	11.69	8.13	44.35	3.51
582	583	6.381994	TGGATACACGGGACTATTTTTAGTCT	59.618	38.462	11.69	0.00	46.17	3.24
583	584	6.576185	TGGATACACGGGACTATTTTTAGTC	58.424	40.000	0.00	4.87	46.17	2.59
584	585	6.549433	TGGATACACGGGACTATTTTTAGT	57.451	37.500	0.00	0.00	46.17	2.24
601	602	3.621715	CGTTTTAGAGGGTGCTTGGATAC	59.378	47.826	0.00	0.00	0.00	2.24
602	603	3.262405	ACGTTTTAGAGGGTGCTTGGATA	59.738	43.478	0.00	0.00	0.00	2.59
603	604	2.039879	ACGTTTTAGAGGGTGCTTGGAT	59.960	45.455	0.00	0.00	0.00	3.41
604	605	1.418637	ACGTTTTAGAGGGTGCTTGGA	59.581	47.619	0.00	0.00	0.00	3.53
605	606	1.892209	ACGTTTTAGAGGGTGCTTGG	58.108	50.000	0.00	0.00	0.00	3.61
606	607	3.621715	GGATACGTTTTAGAGGGTGCTTG	59.378	47.826	0.00	0.00	0.00	4.01
607	608	3.262405	TGGATACGTTTTAGAGGGTGCTT	59.738	43.478	0.00	0.00	42.51	3.91
608	609	2.835764	TGGATACGTTTTAGAGGGTGCT	59.164	45.455	0.00	0.00	42.51	4.40
609	610	3.255969	TGGATACGTTTTAGAGGGTGC	57.744	47.619	0.00	0.00	42.51	5.01
610	611	3.621715	GCTTGGATACGTTTTAGAGGGTG	59.378	47.826	0.00	0.00	42.51	4.61
611	612	3.262405	TGCTTGGATACGTTTTAGAGGGT	59.738	43.478	0.00	0.00	42.51	4.34
612	613	3.869065	TGCTTGGATACGTTTTAGAGGG	58.131	45.455	0.00	0.00	42.51	4.30
613	614	4.260784	GCATGCTTGGATACGTTTTAGAGG	60.261	45.833	11.37	0.00	42.51	3.69
614	615	4.572389	AGCATGCTTGGATACGTTTTAGAG	59.428	41.667	16.30	0.00	42.51	2.43
615	616	4.513442	AGCATGCTTGGATACGTTTTAGA	58.487	39.130	16.30	0.00	42.51	2.10
616	617	4.572389	AGAGCATGCTTGGATACGTTTTAG	59.428	41.667	23.61	0.00	42.51	1.85
617	618	4.513442	AGAGCATGCTTGGATACGTTTTA	58.487	39.130	23.61	0.00	42.51	1.52
618	619	3.347216	AGAGCATGCTTGGATACGTTTT	58.653	40.909	23.61	0.00	42.51	2.43
619	620	2.991250	AGAGCATGCTTGGATACGTTT	58.009	42.857	23.61	0.00	42.51	3.60
620	621	2.698855	AGAGCATGCTTGGATACGTT	57.301	45.000	23.61	0.00	42.51	3.99
621	622	2.698855	AAGAGCATGCTTGGATACGT	57.301	45.000	23.61	2.80	42.51	3.57
622	623	5.446709	CAATTAAGAGCATGCTTGGATACG	58.553	41.667	23.61	5.42	42.51	3.06
623	624	5.218139	GCAATTAAGAGCATGCTTGGATAC	58.782	41.667	23.61	7.76	35.93	2.24
624	625	4.023792	CGCAATTAAGAGCATGCTTGGATA	60.024	41.667	23.61	9.86	36.67	2.59
625	626	3.243301	CGCAATTAAGAGCATGCTTGGAT	60.243	43.478	23.61	10.95	36.67	3.41
626	627	2.097954	CGCAATTAAGAGCATGCTTGGA	59.902	45.455	23.61	8.99	36.67	3.53
627	628	2.097954	TCGCAATTAAGAGCATGCTTGG	59.902	45.455	23.61	3.72	36.67	3.61
628	629	3.181503	ACTCGCAATTAAGAGCATGCTTG	60.182	43.478	23.61	15.84	37.99	4.01
629	630	3.012518	ACTCGCAATTAAGAGCATGCTT	58.987	40.909	23.61	9.66	37.99	3.91
630	631	2.636830	ACTCGCAATTAAGAGCATGCT	58.363	42.857	22.92	22.92	37.99	3.79
631	632	3.357897	GAACTCGCAATTAAGAGCATGC	58.642	45.455	10.51	10.51	37.99	4.06
632	633	3.544834	CCGAACTCGCAATTAAGAGCATG	60.545	47.826	8.70	0.00	37.99	4.06
633	634	2.609459	CCGAACTCGCAATTAAGAGCAT	59.391	45.455	8.70	0.39	37.99	3.79
634	635	1.999735	CCGAACTCGCAATTAAGAGCA	59.000	47.619	8.70	0.00	37.99	4.26
635	636	1.267582	GCCGAACTCGCAATTAAGAGC	60.268	52.381	8.70	0.00	37.99	4.09
636	637	1.327764	GGCCGAACTCGCAATTAAGAG	59.672	52.381	7.55	7.55	40.16	2.85
637	638	1.365699	GGCCGAACTCGCAATTAAGA	58.634	50.000	0.00	0.00	38.18	2.10
638	639	0.026285	CGGCCGAACTCGCAATTAAG	59.974	55.000	24.07	0.00	38.18	1.85
670	671	3.118038	TGAACTGGTTTGGTTGAGCTAGT	60.118	43.478	0.00	0.00	0.00	2.57
710	730	7.280428	TCACGCTCATTCCTAGTAGTATATAGC	59.720	40.741	0.00	0.00	0.00	2.97
725	748	4.963953	CGTCCAATTTATTCACGCTCATTC	59.036	41.667	0.00	0.00	0.00	2.67
908	941	4.083110	ACAAGTTCATTTGCGATCCTCTTG	60.083	41.667	0.00	0.00	36.74	3.02
967	1002	1.068610	GGCTCTCTCGATCTTGATCGG	60.069	57.143	26.12	18.67	43.64	4.18
991	1034	2.438434	CCTCGCCATGGTTGACCC	60.438	66.667	14.67	0.00	34.29	4.46
996	1039	2.224159	ACCAGACCTCGCCATGGTT	61.224	57.895	14.67	0.00	43.49	3.67
1021	1064	4.308458	CGCAACGACCCAGACCCA	62.308	66.667	0.00	0.00	0.00	4.51
1256	1326	6.988109	ATACATCATCTTACGTACGCTTTC	57.012	37.500	16.72	0.00	0.00	2.62
1433	1552	1.739466	ACACGCATCCACACAATCATC	59.261	47.619	0.00	0.00	0.00	2.92
1465	1588	9.405587	ACGAATAAAATTACATGTGTTTTCTGG	57.594	29.630	20.28	14.62	0.00	3.86
1472	1595	7.377766	AGAGCACGAATAAAATTACATGTGT	57.622	32.000	9.11	0.00	0.00	3.72
1476	1599	8.009974	GCGAATAGAGCACGAATAAAATTACAT	58.990	33.333	0.00	0.00	34.19	2.29
1551	1690	6.836527	AGGAGCTCTCTAATTCTTAGCTGTAA	59.163	38.462	14.64	0.00	43.31	2.41
1614	1753	2.759973	CACTAGGGGAGCGCCTGA	60.760	66.667	15.53	0.63	0.00	3.86
1625	1767	3.782443	GGGCCACGTCCCACTAGG	61.782	72.222	4.39	0.00	45.82	3.02
1645	1787	1.406970	GCAGCAGTCGAGCGAGTTAC	61.407	60.000	0.00	0.00	40.15	2.50
1771	1913	7.928307	TTTGGGAACATTTTTCAAATTCACA	57.072	28.000	0.00	0.00	42.32	3.58
1852	2178	5.238650	GGCAACTTGTAGCTCTAAAAGTTCA	59.761	40.000	17.82	0.00	45.59	3.18
2101	2676	4.660938	GCGCACACCCCCTCCTTT	62.661	66.667	0.30	0.00	0.00	3.11
2259	2859	2.877168	GGCTTGCAATCTATGTGAGGAG	59.123	50.000	0.00	0.00	0.00	3.69
2268	2868	3.010584	AGAAGAAAGGGGCTTGCAATCTA	59.989	43.478	0.00	0.00	0.00	1.98
2326	2926	0.451783	CAGTTGGGGCGTATTGAAGC	59.548	55.000	0.00	0.00	0.00	3.86

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.