Multiple sequence alignment - TraesCS6A01G302600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G302600 chr6A 100.000 2315 0 0 1 2315 535995060 535992746 0.000000e+00 4276.0
1 TraesCS6A01G302600 chr6B 92.356 1609 88 12 275 1870 583191434 583189848 0.000000e+00 2257.0
2 TraesCS6A01G302600 chr6B 91.844 282 9 6 1 276 583191778 583191505 4.670000e-102 381.0
3 TraesCS6A01G302600 chr6B 93.277 238 15 1 2054 2291 322309703 322309939 1.320000e-92 350.0
4 TraesCS6A01G302600 chr6B 92.562 242 15 3 2050 2291 613259240 613259478 6.120000e-91 344.0
5 TraesCS6A01G302600 chr6D 92.626 1451 73 14 275 1708 389608097 389606664 0.000000e+00 2056.0
6 TraesCS6A01G302600 chr6D 91.727 278 13 5 1 276 389608447 389608178 6.040000e-101 377.0
7 TraesCS6A01G302600 chr6D 89.474 228 20 4 2061 2287 6301341 6301117 3.760000e-73 285.0
8 TraesCS6A01G302600 chr6D 87.308 260 20 4 2061 2309 12150066 12150323 3.760000e-73 285.0
9 TraesCS6A01G302600 chr6D 89.427 227 23 1 2061 2287 19656717 19656492 3.760000e-73 285.0
10 TraesCS6A01G302600 chr6D 93.600 125 4 4 1691 1814 389606645 389606524 1.410000e-42 183.0
11 TraesCS6A01G302600 chr6D 88.571 70 7 1 1888 1957 347702531 347702599 1.470000e-12 84.2
12 TraesCS6A01G302600 chr4D 82.735 1002 133 27 647 1628 31762690 31763671 0.000000e+00 856.0
13 TraesCS6A01G302600 chr4D 87.640 267 22 2 2056 2312 457935893 457936158 1.340000e-77 300.0
14 TraesCS6A01G302600 chr4D 87.645 259 21 2 2061 2309 418831893 418832150 8.090000e-75 291.0
15 TraesCS6A01G302600 chr4D 83.740 123 19 1 1920 2042 70471780 70471659 5.230000e-22 115.0
16 TraesCS6A01G302600 chr4B 83.524 874 103 27 769 1628 45206092 45206938 0.000000e+00 778.0
17 TraesCS6A01G302600 chr4B 93.277 238 15 1 2054 2291 285848027 285848263 1.320000e-92 350.0
18 TraesCS6A01G302600 chr4B 92.562 242 17 1 2050 2291 103362261 103362501 1.700000e-91 346.0
19 TraesCS6A01G302600 chr4A 80.876 1004 138 32 657 1632 571031940 571030963 0.000000e+00 741.0
20 TraesCS6A01G302600 chr1B 92.946 241 16 1 2051 2291 326870197 326870436 1.320000e-92 350.0
21 TraesCS6A01G302600 chr1B 86.111 180 15 1 2143 2312 532274695 532274874 3.930000e-43 185.0
22 TraesCS6A01G302600 chr1B 83.333 90 15 0 1967 2056 540443749 540443838 1.470000e-12 84.2
23 TraesCS6A01G302600 chr1B 81.443 97 18 0 1924 2020 102670961 102671057 1.910000e-11 80.5
24 TraesCS6A01G302600 chr5B 93.249 237 15 1 2055 2291 300180484 300180249 4.730000e-92 348.0
25 TraesCS6A01G302600 chr2B 93.590 234 14 1 2058 2291 394188285 394188517 4.730000e-92 348.0
26 TraesCS6A01G302600 chr2B 90.722 97 4 3 1 92 342302485 342302581 8.680000e-25 124.0
27 TraesCS6A01G302600 chr2B 79.141 163 28 6 1897 2056 645297356 645297515 8.750000e-20 108.0
28 TraesCS6A01G302600 chr7D 92.857 238 16 1 2054 2291 534543166 534542930 6.120000e-91 344.0
29 TraesCS6A01G302600 chr7D 84.314 153 24 0 1888 2040 14915070 14914918 1.430000e-32 150.0
30 TraesCS6A01G302600 chr7D 83.974 156 25 0 1901 2056 53563113 53562958 1.430000e-32 150.0
31 TraesCS6A01G302600 chr7B 92.857 238 16 1 2054 2291 110889776 110890012 6.120000e-91 344.0
32 TraesCS6A01G302600 chr7B 96.154 52 2 0 1819 1870 682887026 682887077 4.100000e-13 86.1
33 TraesCS6A01G302600 chrUn 89.427 227 23 1 2061 2287 27665251 27665026 3.760000e-73 285.0
34 TraesCS6A01G302600 chr5A 85.075 268 40 0 1000 1267 138202311 138202578 8.150000e-70 274.0
35 TraesCS6A01G302600 chr1A 83.764 271 29 6 2054 2313 283442821 283443087 2.300000e-60 243.0
36 TraesCS6A01G302600 chr1A 85.859 198 17 2 2125 2312 283442822 283442626 1.400000e-47 200.0
37 TraesCS6A01G302600 chr2A 82.836 134 23 0 1923 2056 468596677 468596544 1.120000e-23 121.0
38 TraesCS6A01G302600 chr2A 87.755 98 7 4 1 93 350735523 350735620 2.430000e-20 110.0
39 TraesCS6A01G302600 chr3B 84.167 120 19 0 1937 2056 537310462 537310581 1.450000e-22 117.0
40 TraesCS6A01G302600 chr5D 81.560 141 23 3 1895 2033 110602270 110602409 1.880000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G302600 chr6A 535992746 535995060 2314 True 4276 4276 100.000 1 2315 1 chr6A.!!$R1 2314
1 TraesCS6A01G302600 chr6B 583189848 583191778 1930 True 1319 2257 92.100 1 1870 2 chr6B.!!$R1 1869
2 TraesCS6A01G302600 chr6D 389606524 389608447 1923 True 872 2056 92.651 1 1814 3 chr6D.!!$R3 1813
3 TraesCS6A01G302600 chr4D 31762690 31763671 981 False 856 856 82.735 647 1628 1 chr4D.!!$F1 981
4 TraesCS6A01G302600 chr4B 45206092 45206938 846 False 778 778 83.524 769 1628 1 chr4B.!!$F1 859
5 TraesCS6A01G302600 chr4A 571030963 571031940 977 True 741 741 80.876 657 1632 1 chr4A.!!$R1 975

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
183 190 0.885879 ATGCCGTCGTGTACTCTGAA 59.114 50.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2150 2318 0.033109 ATCCCCTTAGGCTTGCCAAC 60.033 55.0 14.54 0.0 34.51 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
175 182 2.890808 AGATAATCATGCCGTCGTGT 57.109 45.000 0.00 0.00 0.00 4.49
183 190 0.885879 ATGCCGTCGTGTACTCTGAA 59.114 50.000 0.00 0.00 0.00 3.02
185 192 1.135489 TGCCGTCGTGTACTCTGAATC 60.135 52.381 0.00 0.00 0.00 2.52
186 193 1.132643 GCCGTCGTGTACTCTGAATCT 59.867 52.381 0.00 0.00 0.00 2.40
187 194 2.791849 GCCGTCGTGTACTCTGAATCTC 60.792 54.545 0.00 0.00 0.00 2.75
188 195 2.678836 CCGTCGTGTACTCTGAATCTCT 59.321 50.000 0.00 0.00 0.00 3.10
189 196 3.486043 CCGTCGTGTACTCTGAATCTCTG 60.486 52.174 0.00 0.00 0.00 3.35
190 197 3.371285 CGTCGTGTACTCTGAATCTCTGA 59.629 47.826 0.00 0.00 0.00 3.27
191 198 4.034626 CGTCGTGTACTCTGAATCTCTGAT 59.965 45.833 0.00 0.00 0.00 2.90
192 199 5.447954 CGTCGTGTACTCTGAATCTCTGATT 60.448 44.000 0.00 0.00 0.00 2.57
193 200 5.968848 GTCGTGTACTCTGAATCTCTGATTC 59.031 44.000 11.96 11.96 0.00 2.52
312 402 4.520111 TGTTGAATTGGTTCATCCTCTGTG 59.480 41.667 0.00 0.00 43.49 3.66
408 498 8.805175 AGTTGTTGAATCATTACATTTCATCCA 58.195 29.630 0.00 0.00 0.00 3.41
420 510 8.681486 TTACATTTCATCCATTATGAGGTGAG 57.319 34.615 0.00 0.00 45.32 3.51
493 583 5.968848 TGAAAATAATCGATTTAAGCACGGC 59.031 36.000 17.19 0.00 36.71 5.68
640 730 5.880332 GGCAGTTATGAACTCTATTTGGTGA 59.120 40.000 0.00 0.00 40.46 4.02
648 738 4.851639 ACTCTATTTGGTGATTGCTCCT 57.148 40.909 0.00 0.00 0.00 3.69
747 841 5.769662 AGAGTTGTTGAGGCATACATTTCAA 59.230 36.000 0.00 0.00 0.00 2.69
758 852 6.660521 AGGCATACATTTCAATCTTTGTGAGA 59.339 34.615 0.00 0.00 39.13 3.27
760 854 7.434307 GGCATACATTTCAATCTTTGTGAGATG 59.566 37.037 4.03 4.03 44.41 2.90
761 855 8.186163 GCATACATTTCAATCTTTGTGAGATGA 58.814 33.333 10.77 0.00 44.41 2.92
765 859 9.635520 ACATTTCAATCTTTGTGAGATGAAATC 57.364 29.630 10.77 0.00 44.41 2.17
825 920 7.059212 CGAATTTCTTGCAATGTTCTGAAAAC 58.941 34.615 11.76 8.96 0.00 2.43
828 923 6.645700 TTCTTGCAATGTTCTGAAAACAAC 57.354 33.333 0.00 0.00 33.42 3.32
832 927 6.403866 TGCAATGTTCTGAAAACAACCTAT 57.596 33.333 0.00 0.00 33.42 2.57
855 957 9.455847 CTATTTTAACTACGGTCCTGTGTATAC 57.544 37.037 0.00 0.00 0.00 1.47
980 1085 5.065988 CCGGAAACAAATATTTCATCCTCGT 59.934 40.000 15.95 2.05 39.85 4.18
981 1086 6.404293 CCGGAAACAAATATTTCATCCTCGTT 60.404 38.462 15.95 6.83 39.85 3.85
1065 1170 2.359230 AAAGCCAGGACAGAGCGC 60.359 61.111 0.00 0.00 0.00 5.92
1299 1404 1.303317 GCTGAAGCCGGGGAAGAAA 60.303 57.895 2.18 0.00 34.31 2.52
1361 1469 2.667473 TCTAGCTTGTTTAGACGCCC 57.333 50.000 0.00 0.00 0.00 6.13
1399 1510 2.609244 CCGCGGATTTCATGTGGTTTTT 60.609 45.455 24.07 0.00 0.00 1.94
1400 1511 2.661195 CGCGGATTTCATGTGGTTTTTC 59.339 45.455 0.00 0.00 0.00 2.29
1401 1512 3.611530 CGCGGATTTCATGTGGTTTTTCT 60.612 43.478 0.00 0.00 0.00 2.52
1402 1513 3.920412 GCGGATTTCATGTGGTTTTTCTC 59.080 43.478 0.00 0.00 0.00 2.87
1424 1538 2.355115 CGGGTTTTGGCTAGCCCT 59.645 61.111 30.81 0.00 38.97 5.19
1527 1645 1.754234 GGGGCGGATCAGCACATTT 60.754 57.895 21.81 0.00 43.62 2.32
1528 1646 1.434696 GGGCGGATCAGCACATTTG 59.565 57.895 19.63 0.00 40.96 2.32
1571 1689 2.564771 GCTGGCTAGATGCATGTAACA 58.435 47.619 2.46 5.85 45.15 2.41
1572 1690 2.547211 GCTGGCTAGATGCATGTAACAG 59.453 50.000 21.45 21.45 45.15 3.16
1573 1691 2.547211 CTGGCTAGATGCATGTAACAGC 59.453 50.000 16.95 13.15 45.15 4.40
1676 1807 2.351350 CCGCGCTAAAAATCTGTGGTTT 60.351 45.455 5.56 0.00 0.00 3.27
1741 1908 4.344359 TGGGGTTGAAATTGTTTTAGCC 57.656 40.909 0.00 0.00 0.00 3.93
1770 1937 3.243670 TGAGCTTGCATCCGAGATAGAAG 60.244 47.826 0.00 0.00 0.00 2.85
1784 1951 1.729586 TAGAAGGAGCCCACAACAGT 58.270 50.000 0.00 0.00 0.00 3.55
1785 1952 0.846693 AGAAGGAGCCCACAACAGTT 59.153 50.000 0.00 0.00 0.00 3.16
1814 1982 8.789825 TTTTTAACTTATAGACAATGCCCGTA 57.210 30.769 0.00 0.00 0.00 4.02
1815 1983 8.967664 TTTTAACTTATAGACAATGCCCGTAT 57.032 30.769 0.00 0.00 0.00 3.06
1863 2031 9.555727 TTCAGTATATTAGCTTGTGATTTACCC 57.444 33.333 0.00 0.00 0.00 3.69
1864 2032 8.710239 TCAGTATATTAGCTTGTGATTTACCCA 58.290 33.333 0.00 0.00 0.00 4.51
1867 2035 8.947115 GTATATTAGCTTGTGATTTACCCATCC 58.053 37.037 0.00 0.00 0.00 3.51
1868 2036 3.737559 AGCTTGTGATTTACCCATCCA 57.262 42.857 0.00 0.00 0.00 3.41
1869 2037 4.255510 AGCTTGTGATTTACCCATCCAT 57.744 40.909 0.00 0.00 0.00 3.41
1870 2038 4.613437 AGCTTGTGATTTACCCATCCATT 58.387 39.130 0.00 0.00 0.00 3.16
1871 2039 5.765510 AGCTTGTGATTTACCCATCCATTA 58.234 37.500 0.00 0.00 0.00 1.90
1872 2040 5.829924 AGCTTGTGATTTACCCATCCATTAG 59.170 40.000 0.00 0.00 0.00 1.73
1873 2041 5.507985 GCTTGTGATTTACCCATCCATTAGC 60.508 44.000 0.00 0.00 0.00 3.09
1874 2042 5.387113 TGTGATTTACCCATCCATTAGCT 57.613 39.130 0.00 0.00 0.00 3.32
1875 2043 5.765510 TGTGATTTACCCATCCATTAGCTT 58.234 37.500 0.00 0.00 0.00 3.74
1876 2044 5.593909 TGTGATTTACCCATCCATTAGCTTG 59.406 40.000 0.00 0.00 0.00 4.01
1877 2045 5.594317 GTGATTTACCCATCCATTAGCTTGT 59.406 40.000 0.00 0.00 0.00 3.16
1878 2046 5.593909 TGATTTACCCATCCATTAGCTTGTG 59.406 40.000 0.00 0.00 0.00 3.33
1879 2047 4.853468 TTACCCATCCATTAGCTTGTGA 57.147 40.909 0.00 0.00 0.00 3.58
1880 2048 3.959495 ACCCATCCATTAGCTTGTGAT 57.041 42.857 0.00 0.00 0.00 3.06
1881 2049 4.255510 ACCCATCCATTAGCTTGTGATT 57.744 40.909 0.00 0.00 0.00 2.57
1882 2050 4.613437 ACCCATCCATTAGCTTGTGATTT 58.387 39.130 0.00 0.00 0.00 2.17
1883 2051 5.765510 ACCCATCCATTAGCTTGTGATTTA 58.234 37.500 0.00 0.00 0.00 1.40
1884 2052 5.594317 ACCCATCCATTAGCTTGTGATTTAC 59.406 40.000 0.00 0.00 0.00 2.01
1885 2053 5.010012 CCCATCCATTAGCTTGTGATTTACC 59.990 44.000 0.00 0.00 0.00 2.85
1886 2054 5.010012 CCATCCATTAGCTTGTGATTTACCC 59.990 44.000 0.00 0.00 0.00 3.69
1887 2055 5.186256 TCCATTAGCTTGTGATTTACCCA 57.814 39.130 0.00 0.00 0.00 4.51
1888 2056 5.765510 TCCATTAGCTTGTGATTTACCCAT 58.234 37.500 0.00 0.00 0.00 4.00
1889 2057 5.827797 TCCATTAGCTTGTGATTTACCCATC 59.172 40.000 0.00 0.00 0.00 3.51
1890 2058 5.010012 CCATTAGCTTGTGATTTACCCATCC 59.990 44.000 0.00 0.00 0.00 3.51
1891 2059 2.643551 AGCTTGTGATTTACCCATCCG 58.356 47.619 0.00 0.00 0.00 4.18
1892 2060 2.026262 AGCTTGTGATTTACCCATCCGT 60.026 45.455 0.00 0.00 0.00 4.69
1893 2061 3.199071 AGCTTGTGATTTACCCATCCGTA 59.801 43.478 0.00 0.00 0.00 4.02
1894 2062 3.560068 GCTTGTGATTTACCCATCCGTAG 59.440 47.826 0.00 0.00 0.00 3.51
1895 2063 4.682320 GCTTGTGATTTACCCATCCGTAGA 60.682 45.833 0.00 0.00 0.00 2.59
1896 2064 5.611374 CTTGTGATTTACCCATCCGTAGAT 58.389 41.667 0.00 0.00 0.00 1.98
1897 2065 5.623956 TGTGATTTACCCATCCGTAGATT 57.376 39.130 0.00 0.00 0.00 2.40
1898 2066 5.996644 TGTGATTTACCCATCCGTAGATTT 58.003 37.500 0.00 0.00 0.00 2.17
1899 2067 7.127012 TGTGATTTACCCATCCGTAGATTTA 57.873 36.000 0.00 0.00 0.00 1.40
1900 2068 7.214381 TGTGATTTACCCATCCGTAGATTTAG 58.786 38.462 0.00 0.00 0.00 1.85
1901 2069 7.147620 TGTGATTTACCCATCCGTAGATTTAGT 60.148 37.037 0.00 0.00 0.00 2.24
1902 2070 8.362639 GTGATTTACCCATCCGTAGATTTAGTA 58.637 37.037 0.00 0.00 0.00 1.82
1903 2071 8.582437 TGATTTACCCATCCGTAGATTTAGTAG 58.418 37.037 0.00 0.00 0.00 2.57
1904 2072 6.906157 TTACCCATCCGTAGATTTAGTAGG 57.094 41.667 0.00 0.00 0.00 3.18
1905 2073 3.577415 ACCCATCCGTAGATTTAGTAGGC 59.423 47.826 0.00 0.00 0.00 3.93
1906 2074 3.576982 CCCATCCGTAGATTTAGTAGGCA 59.423 47.826 0.00 0.00 0.00 4.75
1907 2075 4.322049 CCCATCCGTAGATTTAGTAGGCAG 60.322 50.000 0.00 0.00 0.00 4.85
1908 2076 4.322049 CCATCCGTAGATTTAGTAGGCAGG 60.322 50.000 0.00 0.00 0.00 4.85
1909 2077 2.626743 TCCGTAGATTTAGTAGGCAGGC 59.373 50.000 0.00 0.00 0.00 4.85
1910 2078 2.364324 CCGTAGATTTAGTAGGCAGGCA 59.636 50.000 0.00 0.00 0.00 4.75
1911 2079 3.381949 CGTAGATTTAGTAGGCAGGCAC 58.618 50.000 0.00 0.00 0.00 5.01
1912 2080 3.181479 CGTAGATTTAGTAGGCAGGCACA 60.181 47.826 0.00 0.00 0.00 4.57
1913 2081 3.550437 AGATTTAGTAGGCAGGCACAG 57.450 47.619 0.00 0.00 0.00 3.66
1914 2082 3.107601 AGATTTAGTAGGCAGGCACAGA 58.892 45.455 0.00 0.00 0.00 3.41
1915 2083 3.519510 AGATTTAGTAGGCAGGCACAGAA 59.480 43.478 0.00 0.00 0.00 3.02
1916 2084 3.334583 TTTAGTAGGCAGGCACAGAAG 57.665 47.619 0.00 0.00 0.00 2.85
1917 2085 2.231716 TAGTAGGCAGGCACAGAAGA 57.768 50.000 0.00 0.00 0.00 2.87
1918 2086 1.352083 AGTAGGCAGGCACAGAAGAA 58.648 50.000 0.00 0.00 0.00 2.52
1919 2087 1.277557 AGTAGGCAGGCACAGAAGAAG 59.722 52.381 0.00 0.00 0.00 2.85
1920 2088 0.615331 TAGGCAGGCACAGAAGAAGG 59.385 55.000 0.00 0.00 0.00 3.46
1921 2089 2.338785 GGCAGGCACAGAAGAAGGC 61.339 63.158 0.00 0.00 0.00 4.35
1922 2090 1.303155 GCAGGCACAGAAGAAGGCT 60.303 57.895 0.00 0.00 38.87 4.58
1923 2091 1.304509 GCAGGCACAGAAGAAGGCTC 61.305 60.000 0.00 0.00 35.85 4.70
1924 2092 0.324285 CAGGCACAGAAGAAGGCTCT 59.676 55.000 0.00 0.00 35.85 4.09
1925 2093 1.063183 AGGCACAGAAGAAGGCTCTT 58.937 50.000 0.00 0.00 44.93 2.85
1932 2100 3.953006 AAGAAGGCTCTTCTGGCAG 57.047 52.632 8.58 8.58 37.31 4.85
1933 2101 1.063183 AAGAAGGCTCTTCTGGCAGT 58.937 50.000 15.27 0.00 37.31 4.40
1934 2102 0.324285 AGAAGGCTCTTCTGGCAGTG 59.676 55.000 15.27 9.03 34.73 3.66
1935 2103 0.036022 GAAGGCTCTTCTGGCAGTGT 59.964 55.000 15.27 0.00 34.73 3.55
1936 2104 0.250640 AAGGCTCTTCTGGCAGTGTG 60.251 55.000 15.27 10.50 34.73 3.82
1937 2105 1.072159 GGCTCTTCTGGCAGTGTGT 59.928 57.895 15.27 0.00 0.00 3.72
1938 2106 1.233285 GGCTCTTCTGGCAGTGTGTG 61.233 60.000 15.27 7.89 0.00 3.82
1949 2117 2.975410 CAGTGTGTGCATGATTCGTT 57.025 45.000 0.00 0.00 0.00 3.85
1950 2118 3.272439 CAGTGTGTGCATGATTCGTTT 57.728 42.857 0.00 0.00 0.00 3.60
1951 2119 3.228749 CAGTGTGTGCATGATTCGTTTC 58.771 45.455 0.00 0.00 0.00 2.78
1952 2120 2.877786 AGTGTGTGCATGATTCGTTTCA 59.122 40.909 0.00 0.00 0.00 2.69
1953 2121 2.973224 GTGTGTGCATGATTCGTTTCAC 59.027 45.455 0.00 0.00 0.00 3.18
1954 2122 2.233355 GTGTGCATGATTCGTTTCACG 58.767 47.619 0.00 0.00 44.19 4.35
1955 2123 1.250476 GTGCATGATTCGTTTCACGC 58.750 50.000 0.00 2.34 42.21 5.34
1956 2124 0.179227 TGCATGATTCGTTTCACGCG 60.179 50.000 3.53 3.53 42.21 6.01
1957 2125 0.179225 GCATGATTCGTTTCACGCGT 60.179 50.000 5.58 5.58 42.21 6.01
1958 2126 1.513102 CATGATTCGTTTCACGCGTG 58.487 50.000 32.76 32.76 42.21 5.34
1959 2127 1.125930 CATGATTCGTTTCACGCGTGA 59.874 47.619 36.40 36.40 42.21 4.35
1960 2128 1.209998 TGATTCGTTTCACGCGTGAA 58.790 45.000 42.01 42.01 46.72 3.18
1969 2137 3.513462 TTCACGCGTGAAAGTACATTG 57.487 42.857 43.05 14.87 45.56 2.82
1970 2138 1.193650 TCACGCGTGAAAGTACATTGC 59.806 47.619 37.68 0.00 36.53 3.56
1971 2139 0.162933 ACGCGTGAAAGTACATTGCG 59.837 50.000 12.93 11.09 45.53 4.85
1972 2140 1.120147 CGCGTGAAAGTACATTGCGC 61.120 55.000 15.10 15.10 39.24 6.09
1973 2141 0.793104 GCGTGAAAGTACATTGCGCC 60.793 55.000 4.18 0.00 37.83 6.53
1974 2142 0.179200 CGTGAAAGTACATTGCGCCC 60.179 55.000 4.18 0.00 0.00 6.13
1975 2143 1.165270 GTGAAAGTACATTGCGCCCT 58.835 50.000 4.18 0.00 0.00 5.19
1976 2144 2.352388 GTGAAAGTACATTGCGCCCTA 58.648 47.619 4.18 0.00 0.00 3.53
1977 2145 2.095372 GTGAAAGTACATTGCGCCCTAC 59.905 50.000 4.18 0.00 0.00 3.18
1994 2162 6.161855 GCCCTACGATATGGATATCATTCA 57.838 41.667 4.83 0.00 39.23 2.57
1995 2163 6.582636 GCCCTACGATATGGATATCATTCAA 58.417 40.000 4.83 0.00 39.23 2.69
1996 2164 6.480320 GCCCTACGATATGGATATCATTCAAC 59.520 42.308 4.83 0.00 39.23 3.18
1997 2165 7.555965 CCCTACGATATGGATATCATTCAACA 58.444 38.462 4.83 0.00 39.23 3.33
1998 2166 8.040727 CCCTACGATATGGATATCATTCAACAA 58.959 37.037 4.83 0.00 39.23 2.83
1999 2167 8.873830 CCTACGATATGGATATCATTCAACAAC 58.126 37.037 4.83 0.00 39.23 3.32
2000 2168 7.351414 ACGATATGGATATCATTCAACAACG 57.649 36.000 4.83 0.00 39.23 4.10
2001 2169 6.128553 ACGATATGGATATCATTCAACAACGC 60.129 38.462 4.83 0.00 39.23 4.84
2002 2170 6.128580 CGATATGGATATCATTCAACAACGCA 60.129 38.462 4.83 0.00 39.23 5.24
2003 2171 5.833406 ATGGATATCATTCAACAACGCAA 57.167 34.783 4.83 0.00 30.55 4.85
2004 2172 5.833406 TGGATATCATTCAACAACGCAAT 57.167 34.783 4.83 0.00 0.00 3.56
2005 2173 5.580661 TGGATATCATTCAACAACGCAATG 58.419 37.500 4.83 0.00 0.00 2.82
2006 2174 5.125257 TGGATATCATTCAACAACGCAATGT 59.875 36.000 4.83 0.00 34.24 2.71
2007 2175 5.456497 GGATATCATTCAACAACGCAATGTG 59.544 40.000 4.83 0.00 32.81 3.21
2008 2176 3.978718 TCATTCAACAACGCAATGTGA 57.021 38.095 0.00 0.00 32.81 3.58
2009 2177 3.887741 TCATTCAACAACGCAATGTGAG 58.112 40.909 0.00 0.00 32.81 3.51
2010 2178 2.772568 TTCAACAACGCAATGTGAGG 57.227 45.000 0.00 0.00 32.81 3.86
2011 2179 1.674359 TCAACAACGCAATGTGAGGT 58.326 45.000 0.00 0.00 32.81 3.85
2012 2180 1.601903 TCAACAACGCAATGTGAGGTC 59.398 47.619 0.00 0.00 32.81 3.85
2013 2181 0.586319 AACAACGCAATGTGAGGTCG 59.414 50.000 0.00 0.00 32.81 4.79
2014 2182 0.531974 ACAACGCAATGTGAGGTCGT 60.532 50.000 0.00 0.00 34.63 4.34
2015 2183 0.586319 CAACGCAATGTGAGGTCGTT 59.414 50.000 0.00 0.00 43.03 3.85
2016 2184 1.795872 CAACGCAATGTGAGGTCGTTA 59.204 47.619 0.00 0.00 40.75 3.18
2017 2185 2.380084 ACGCAATGTGAGGTCGTTAT 57.620 45.000 0.00 0.00 0.00 1.89
2018 2186 2.268298 ACGCAATGTGAGGTCGTTATC 58.732 47.619 0.00 0.00 0.00 1.75
2019 2187 1.255342 CGCAATGTGAGGTCGTTATCG 59.745 52.381 0.00 0.00 38.55 2.92
2020 2188 2.536365 GCAATGTGAGGTCGTTATCGA 58.464 47.619 0.00 0.00 44.12 3.59
2027 2195 3.664486 GTGAGGTCGTTATCGAATCGATG 59.336 47.826 26.25 11.29 46.43 3.84
2028 2196 3.235195 GAGGTCGTTATCGAATCGATGG 58.765 50.000 26.25 15.56 46.43 3.51
2029 2197 2.621998 AGGTCGTTATCGAATCGATGGT 59.378 45.455 26.25 5.43 46.43 3.55
2030 2198 3.817084 AGGTCGTTATCGAATCGATGGTA 59.183 43.478 26.25 10.09 46.43 3.25
2031 2199 3.910767 GGTCGTTATCGAATCGATGGTAC 59.089 47.826 26.25 18.83 46.43 3.34
2032 2200 3.596982 GTCGTTATCGAATCGATGGTACG 59.403 47.826 27.34 27.34 46.43 3.67
2033 2201 3.248363 TCGTTATCGAATCGATGGTACGT 59.752 43.478 29.42 11.78 46.43 3.57
2034 2202 3.596982 CGTTATCGAATCGATGGTACGTC 59.403 47.826 26.25 8.74 46.43 4.34
2035 2203 4.530388 GTTATCGAATCGATGGTACGTCA 58.470 43.478 26.25 2.42 46.43 4.35
2036 2204 3.917329 ATCGAATCGATGGTACGTCAT 57.083 42.857 18.03 0.00 45.24 3.06
2037 2205 3.263602 TCGAATCGATGGTACGTCATC 57.736 47.619 0.00 7.08 39.93 2.92
2038 2206 2.031420 TCGAATCGATGGTACGTCATCC 60.031 50.000 0.00 4.87 40.13 3.51
2039 2207 2.287368 CGAATCGATGGTACGTCATCCA 60.287 50.000 10.64 9.82 40.13 3.41
2040 2208 3.309388 GAATCGATGGTACGTCATCCAG 58.691 50.000 10.64 0.34 40.13 3.86
2041 2209 2.047002 TCGATGGTACGTCATCCAGA 57.953 50.000 10.64 2.38 40.13 3.86
2042 2210 2.583143 TCGATGGTACGTCATCCAGAT 58.417 47.619 10.64 0.00 40.13 2.90
2043 2211 2.552743 TCGATGGTACGTCATCCAGATC 59.447 50.000 10.64 5.26 40.13 2.75
2044 2212 2.293399 CGATGGTACGTCATCCAGATCA 59.707 50.000 10.64 0.00 40.13 2.92
2045 2213 3.643763 GATGGTACGTCATCCAGATCAC 58.356 50.000 6.06 0.00 38.00 3.06
2046 2214 1.754803 TGGTACGTCATCCAGATCACC 59.245 52.381 0.00 0.00 0.00 4.02
2047 2215 1.269102 GGTACGTCATCCAGATCACCG 60.269 57.143 0.00 0.00 0.00 4.94
2048 2216 1.404391 GTACGTCATCCAGATCACCGT 59.596 52.381 0.00 0.00 0.00 4.83
2049 2217 0.456221 ACGTCATCCAGATCACCGTC 59.544 55.000 0.00 0.00 0.00 4.79
2050 2218 0.455815 CGTCATCCAGATCACCGTCA 59.544 55.000 0.00 0.00 0.00 4.35
2051 2219 1.067669 CGTCATCCAGATCACCGTCAT 59.932 52.381 0.00 0.00 0.00 3.06
2052 2220 2.748605 GTCATCCAGATCACCGTCATC 58.251 52.381 0.00 0.00 0.00 2.92
2053 2221 2.101415 GTCATCCAGATCACCGTCATCA 59.899 50.000 0.00 0.00 0.00 3.07
2054 2222 2.765699 TCATCCAGATCACCGTCATCAA 59.234 45.455 0.00 0.00 0.00 2.57
2055 2223 2.967599 TCCAGATCACCGTCATCAAG 57.032 50.000 0.00 0.00 0.00 3.02
2056 2224 1.482182 TCCAGATCACCGTCATCAAGG 59.518 52.381 0.00 0.00 0.00 3.61
2057 2225 1.473965 CCAGATCACCGTCATCAAGGG 60.474 57.143 0.00 0.00 38.94 3.95
2058 2226 0.833287 AGATCACCGTCATCAAGGGG 59.167 55.000 0.00 0.00 37.22 4.79
2059 2227 0.815615 GATCACCGTCATCAAGGGGC 60.816 60.000 0.00 0.00 37.22 5.80
2060 2228 1.274703 ATCACCGTCATCAAGGGGCT 61.275 55.000 0.00 0.00 37.22 5.19
2061 2229 1.746615 CACCGTCATCAAGGGGCTG 60.747 63.158 0.00 0.00 37.22 4.85
2062 2230 2.224159 ACCGTCATCAAGGGGCTGT 61.224 57.895 0.00 0.00 37.22 4.40
2063 2231 1.002134 CCGTCATCAAGGGGCTGTT 60.002 57.895 0.00 0.00 0.00 3.16
2064 2232 0.609131 CCGTCATCAAGGGGCTGTTT 60.609 55.000 0.00 0.00 0.00 2.83
2065 2233 0.523072 CGTCATCAAGGGGCTGTTTG 59.477 55.000 0.00 0.00 0.00 2.93
2066 2234 0.890683 GTCATCAAGGGGCTGTTTGG 59.109 55.000 0.00 0.00 0.00 3.28
2067 2235 0.482446 TCATCAAGGGGCTGTTTGGT 59.518 50.000 0.00 0.00 0.00 3.67
2068 2236 1.133199 TCATCAAGGGGCTGTTTGGTT 60.133 47.619 0.00 0.00 0.00 3.67
2069 2237 1.693606 CATCAAGGGGCTGTTTGGTTT 59.306 47.619 0.00 0.00 0.00 3.27
2070 2238 1.872773 TCAAGGGGCTGTTTGGTTTT 58.127 45.000 0.00 0.00 0.00 2.43
2071 2239 3.033659 TCAAGGGGCTGTTTGGTTTTA 57.966 42.857 0.00 0.00 0.00 1.52
2072 2240 2.962421 TCAAGGGGCTGTTTGGTTTTAG 59.038 45.455 0.00 0.00 0.00 1.85
2073 2241 2.009681 AGGGGCTGTTTGGTTTTAGG 57.990 50.000 0.00 0.00 0.00 2.69
2074 2242 0.320374 GGGGCTGTTTGGTTTTAGGC 59.680 55.000 0.00 0.00 35.24 3.93
2075 2243 0.320374 GGGCTGTTTGGTTTTAGGCC 59.680 55.000 0.00 0.00 46.53 5.19
2076 2244 1.338107 GGCTGTTTGGTTTTAGGCCT 58.662 50.000 11.78 11.78 35.73 5.19
2077 2245 2.521126 GGCTGTTTGGTTTTAGGCCTA 58.479 47.619 8.91 8.91 35.73 3.93
2078 2246 2.492088 GGCTGTTTGGTTTTAGGCCTAG 59.508 50.000 13.36 0.00 35.73 3.02
2079 2247 2.094700 GCTGTTTGGTTTTAGGCCTAGC 60.095 50.000 13.36 6.83 0.00 3.42
2080 2248 3.153919 CTGTTTGGTTTTAGGCCTAGCA 58.846 45.455 13.36 7.23 0.00 3.49
2081 2249 3.763897 CTGTTTGGTTTTAGGCCTAGCAT 59.236 43.478 13.36 0.00 0.00 3.79
2082 2250 4.156477 TGTTTGGTTTTAGGCCTAGCATT 58.844 39.130 13.36 0.00 0.00 3.56
2083 2251 4.021544 TGTTTGGTTTTAGGCCTAGCATTG 60.022 41.667 13.36 0.00 0.00 2.82
2084 2252 2.099405 TGGTTTTAGGCCTAGCATTGC 58.901 47.619 13.36 0.00 0.00 3.56
2090 2258 4.326255 GCCTAGCATTGCCACACT 57.674 55.556 4.70 0.00 0.00 3.55
2091 2259 2.571548 GCCTAGCATTGCCACACTT 58.428 52.632 4.70 0.00 0.00 3.16
2092 2260 0.890683 GCCTAGCATTGCCACACTTT 59.109 50.000 4.70 0.00 0.00 2.66
2093 2261 1.273327 GCCTAGCATTGCCACACTTTT 59.727 47.619 4.70 0.00 0.00 2.27
2094 2262 2.927871 GCCTAGCATTGCCACACTTTTG 60.928 50.000 4.70 0.00 0.00 2.44
2095 2263 2.331194 CTAGCATTGCCACACTTTTGC 58.669 47.619 4.70 0.00 0.00 3.68
2096 2264 0.249996 AGCATTGCCACACTTTTGCC 60.250 50.000 4.70 0.00 0.00 4.52
2097 2265 0.532417 GCATTGCCACACTTTTGCCA 60.532 50.000 0.00 0.00 0.00 4.92
2098 2266 1.219646 CATTGCCACACTTTTGCCAC 58.780 50.000 0.00 0.00 0.00 5.01
2099 2267 0.829333 ATTGCCACACTTTTGCCACA 59.171 45.000 0.00 0.00 0.00 4.17
2100 2268 0.108424 TTGCCACACTTTTGCCACAC 60.108 50.000 0.00 0.00 0.00 3.82
2101 2269 1.253593 TGCCACACTTTTGCCACACA 61.254 50.000 0.00 0.00 0.00 3.72
2102 2270 0.104671 GCCACACTTTTGCCACACAT 59.895 50.000 0.00 0.00 0.00 3.21
2103 2271 1.473080 GCCACACTTTTGCCACACATT 60.473 47.619 0.00 0.00 0.00 2.71
2104 2272 2.903798 CCACACTTTTGCCACACATTT 58.096 42.857 0.00 0.00 0.00 2.32
2105 2273 3.269178 CCACACTTTTGCCACACATTTT 58.731 40.909 0.00 0.00 0.00 1.82
2106 2274 3.688673 CCACACTTTTGCCACACATTTTT 59.311 39.130 0.00 0.00 0.00 1.94
2107 2275 4.437121 CCACACTTTTGCCACACATTTTTG 60.437 41.667 0.00 0.00 0.00 2.44
2108 2276 4.153835 CACACTTTTGCCACACATTTTTGT 59.846 37.500 0.00 0.00 0.00 2.83
2109 2277 4.391523 ACACTTTTGCCACACATTTTTGTC 59.608 37.500 0.00 0.00 0.00 3.18
2110 2278 4.391216 CACTTTTGCCACACATTTTTGTCA 59.609 37.500 0.00 0.00 0.00 3.58
2111 2279 4.999950 ACTTTTGCCACACATTTTTGTCAA 59.000 33.333 0.00 0.00 0.00 3.18
2112 2280 5.122082 ACTTTTGCCACACATTTTTGTCAAG 59.878 36.000 0.00 0.00 0.00 3.02
2113 2281 3.883830 TGCCACACATTTTTGTCAAGT 57.116 38.095 0.00 0.00 0.00 3.16
2114 2282 4.199432 TGCCACACATTTTTGTCAAGTT 57.801 36.364 0.00 0.00 0.00 2.66
2115 2283 4.573900 TGCCACACATTTTTGTCAAGTTT 58.426 34.783 0.00 0.00 0.00 2.66
2116 2284 4.391216 TGCCACACATTTTTGTCAAGTTTG 59.609 37.500 0.00 0.00 0.00 2.93
2117 2285 4.727448 GCCACACATTTTTGTCAAGTTTGC 60.727 41.667 0.00 0.00 0.00 3.68
2118 2286 4.201802 CCACACATTTTTGTCAAGTTTGCC 60.202 41.667 0.00 0.00 0.00 4.52
2119 2287 4.630940 CACACATTTTTGTCAAGTTTGCCT 59.369 37.500 0.00 0.00 0.00 4.75
2120 2288 5.809562 CACACATTTTTGTCAAGTTTGCCTA 59.190 36.000 0.00 0.00 0.00 3.93
2121 2289 6.312426 CACACATTTTTGTCAAGTTTGCCTAA 59.688 34.615 0.00 0.00 0.00 2.69
2122 2290 6.534793 ACACATTTTTGTCAAGTTTGCCTAAG 59.465 34.615 0.00 0.00 0.00 2.18
2123 2291 6.756074 CACATTTTTGTCAAGTTTGCCTAAGA 59.244 34.615 0.00 0.00 0.00 2.10
2124 2292 7.439056 CACATTTTTGTCAAGTTTGCCTAAGAT 59.561 33.333 0.00 0.00 0.00 2.40
2125 2293 7.986889 ACATTTTTGTCAAGTTTGCCTAAGATT 59.013 29.630 0.00 0.00 0.00 2.40
2126 2294 9.474920 CATTTTTGTCAAGTTTGCCTAAGATTA 57.525 29.630 0.00 0.00 0.00 1.75
2127 2295 9.696917 ATTTTTGTCAAGTTTGCCTAAGATTAG 57.303 29.630 0.00 0.00 0.00 1.73
2128 2296 7.817418 TTTGTCAAGTTTGCCTAAGATTAGT 57.183 32.000 0.00 0.00 0.00 2.24
2129 2297 7.817418 TTGTCAAGTTTGCCTAAGATTAGTT 57.183 32.000 0.00 0.00 0.00 2.24
2130 2298 7.435068 TGTCAAGTTTGCCTAAGATTAGTTC 57.565 36.000 0.00 0.00 0.00 3.01
2131 2299 6.995686 TGTCAAGTTTGCCTAAGATTAGTTCA 59.004 34.615 0.00 0.00 0.00 3.18
2132 2300 7.665559 TGTCAAGTTTGCCTAAGATTAGTTCAT 59.334 33.333 0.00 0.00 0.00 2.57
2133 2301 8.178313 GTCAAGTTTGCCTAAGATTAGTTCATC 58.822 37.037 0.00 0.00 0.00 2.92
2134 2302 7.882791 TCAAGTTTGCCTAAGATTAGTTCATCA 59.117 33.333 0.00 0.00 0.00 3.07
2135 2303 8.514594 CAAGTTTGCCTAAGATTAGTTCATCAA 58.485 33.333 0.00 0.00 0.00 2.57
2136 2304 8.635765 AGTTTGCCTAAGATTAGTTCATCAAA 57.364 30.769 0.00 0.00 0.00 2.69
2137 2305 9.077885 AGTTTGCCTAAGATTAGTTCATCAAAA 57.922 29.630 0.00 0.00 0.00 2.44
2138 2306 9.860898 GTTTGCCTAAGATTAGTTCATCAAAAT 57.139 29.630 0.00 0.00 0.00 1.82
2146 2314 9.466497 AAGATTAGTTCATCAAAATAAGAGCCA 57.534 29.630 0.00 0.00 31.53 4.75
2147 2315 8.897752 AGATTAGTTCATCAAAATAAGAGCCAC 58.102 33.333 0.00 0.00 31.53 5.01
2148 2316 7.994425 TTAGTTCATCAAAATAAGAGCCACA 57.006 32.000 0.00 0.00 0.00 4.17
2149 2317 6.899393 AGTTCATCAAAATAAGAGCCACAA 57.101 33.333 0.00 0.00 0.00 3.33
2150 2318 6.917533 AGTTCATCAAAATAAGAGCCACAAG 58.082 36.000 0.00 0.00 0.00 3.16
2151 2319 6.491403 AGTTCATCAAAATAAGAGCCACAAGT 59.509 34.615 0.00 0.00 0.00 3.16
2152 2320 6.899393 TCATCAAAATAAGAGCCACAAGTT 57.101 33.333 0.00 0.00 0.00 2.66
2153 2321 6.680810 TCATCAAAATAAGAGCCACAAGTTG 58.319 36.000 0.00 0.00 0.00 3.16
2161 2329 3.860681 CCACAAGTTGGCAAGCCT 58.139 55.556 12.96 0.00 39.07 4.58
2162 2330 3.034924 CCACAAGTTGGCAAGCCTA 57.965 52.632 12.96 1.22 39.07 3.93
2163 2331 1.327303 CCACAAGTTGGCAAGCCTAA 58.673 50.000 12.96 2.46 39.07 2.69
2164 2332 1.270550 CCACAAGTTGGCAAGCCTAAG 59.729 52.381 12.96 1.51 39.07 2.18
2165 2333 1.270550 CACAAGTTGGCAAGCCTAAGG 59.729 52.381 12.96 0.79 36.94 2.69
2166 2334 0.890683 CAAGTTGGCAAGCCTAAGGG 59.109 55.000 12.96 0.00 36.94 3.95
2167 2335 0.251787 AAGTTGGCAAGCCTAAGGGG 60.252 55.000 12.96 0.00 36.94 4.79
2168 2336 1.140134 AGTTGGCAAGCCTAAGGGGA 61.140 55.000 12.96 0.00 37.23 4.81
2169 2337 0.033109 GTTGGCAAGCCTAAGGGGAT 60.033 55.000 12.96 0.00 37.23 3.85
2170 2338 0.258774 TTGGCAAGCCTAAGGGGATC 59.741 55.000 12.96 0.00 37.23 3.36
2171 2339 0.624500 TGGCAAGCCTAAGGGGATCT 60.625 55.000 12.96 0.00 37.23 2.75
2172 2340 0.553333 GGCAAGCCTAAGGGGATCTT 59.447 55.000 3.29 0.00 39.40 2.40
2173 2341 1.774856 GGCAAGCCTAAGGGGATCTTA 59.225 52.381 3.29 0.00 36.93 2.10
2174 2342 2.376855 GGCAAGCCTAAGGGGATCTTAT 59.623 50.000 3.29 0.00 37.33 1.73
2175 2343 3.560239 GGCAAGCCTAAGGGGATCTTATC 60.560 52.174 3.29 0.00 37.33 1.75
2176 2344 3.073062 GCAAGCCTAAGGGGATCTTATCA 59.927 47.826 0.00 0.00 37.33 2.15
2177 2345 4.646572 CAAGCCTAAGGGGATCTTATCAC 58.353 47.826 0.00 0.00 37.33 3.06
2178 2346 3.941629 AGCCTAAGGGGATCTTATCACA 58.058 45.455 0.00 0.00 37.33 3.58
2179 2347 3.648545 AGCCTAAGGGGATCTTATCACAC 59.351 47.826 0.00 0.00 37.33 3.82
2180 2348 3.648545 GCCTAAGGGGATCTTATCACACT 59.351 47.826 0.00 0.00 37.33 3.55
2181 2349 4.103311 GCCTAAGGGGATCTTATCACACTT 59.897 45.833 0.00 0.00 37.33 3.16
2182 2350 5.398012 GCCTAAGGGGATCTTATCACACTTT 60.398 44.000 0.00 0.00 37.33 2.66
2183 2351 6.663734 CCTAAGGGGATCTTATCACACTTTT 58.336 40.000 0.00 0.00 37.33 2.27
2184 2352 7.119387 CCTAAGGGGATCTTATCACACTTTTT 58.881 38.462 0.00 0.00 37.33 1.94
2185 2353 8.272173 CCTAAGGGGATCTTATCACACTTTTTA 58.728 37.037 0.00 0.00 37.33 1.52
2186 2354 9.853177 CTAAGGGGATCTTATCACACTTTTTAT 57.147 33.333 0.00 0.00 37.33 1.40
2187 2355 8.525290 AAGGGGATCTTATCACACTTTTTATG 57.475 34.615 0.00 0.00 33.20 1.90
2188 2356 7.643123 AGGGGATCTTATCACACTTTTTATGT 58.357 34.615 0.00 0.00 33.20 2.29
2191 2359 9.391006 GGGATCTTATCACACTTTTTATGTGTA 57.609 33.333 5.14 0.00 45.56 2.90
2195 2363 8.673711 TCTTATCACACTTTTTATGTGTATGCC 58.326 33.333 5.14 0.00 45.56 4.40
2196 2364 6.832520 ATCACACTTTTTATGTGTATGCCA 57.167 33.333 5.14 0.00 45.56 4.92
2197 2365 6.832520 TCACACTTTTTATGTGTATGCCAT 57.167 33.333 5.14 0.00 45.56 4.40
2198 2366 6.619744 TCACACTTTTTATGTGTATGCCATG 58.380 36.000 5.14 0.00 45.56 3.66
2199 2367 6.208402 TCACACTTTTTATGTGTATGCCATGT 59.792 34.615 5.14 0.00 45.56 3.21
2200 2368 6.308524 CACACTTTTTATGTGTATGCCATGTG 59.691 38.462 0.00 0.00 45.56 3.21
2201 2369 5.806502 CACTTTTTATGTGTATGCCATGTGG 59.193 40.000 0.00 0.00 38.53 4.17
2202 2370 4.998671 TTTTATGTGTATGCCATGTGGG 57.001 40.909 0.54 0.00 40.85 4.61
2203 2371 2.655090 TATGTGTATGCCATGTGGGG 57.345 50.000 0.54 0.00 37.04 4.96
2211 2379 2.681064 CCATGTGGGGCCCAAGTG 60.681 66.667 30.70 26.87 34.18 3.16
2212 2380 2.118076 CATGTGGGGCCCAAGTGT 59.882 61.111 30.70 10.84 34.18 3.55
2213 2381 2.118076 ATGTGGGGCCCAAGTGTG 59.882 61.111 30.70 0.00 34.18 3.82
2214 2382 4.912395 TGTGGGGCCCAAGTGTGC 62.912 66.667 30.70 14.82 34.18 4.57
2215 2383 4.603535 GTGGGGCCCAAGTGTGCT 62.604 66.667 30.70 0.00 34.18 4.40
2216 2384 3.831637 TGGGGCCCAAGTGTGCTT 61.832 61.111 26.55 0.00 34.82 3.91
2217 2385 2.524148 GGGGCCCAAGTGTGCTTT 60.524 61.111 26.86 0.00 31.49 3.51
2218 2386 2.736531 GGGCCCAAGTGTGCTTTG 59.263 61.111 19.95 0.00 31.49 2.77
2219 2387 2.029518 GGCCCAAGTGTGCTTTGC 59.970 61.111 0.00 0.00 31.49 3.68
2220 2388 2.029518 GCCCAAGTGTGCTTTGCC 59.970 61.111 0.00 0.00 31.49 4.52
2221 2389 2.501602 GCCCAAGTGTGCTTTGCCT 61.502 57.895 0.00 0.00 31.49 4.75
2222 2390 1.178534 GCCCAAGTGTGCTTTGCCTA 61.179 55.000 0.00 0.00 31.49 3.93
2223 2391 1.327303 CCCAAGTGTGCTTTGCCTAA 58.673 50.000 0.00 0.00 31.49 2.69
2224 2392 1.270550 CCCAAGTGTGCTTTGCCTAAG 59.729 52.381 0.00 0.00 36.90 2.18
2225 2393 2.229792 CCAAGTGTGCTTTGCCTAAGA 58.770 47.619 0.22 0.00 35.80 2.10
2226 2394 2.821969 CCAAGTGTGCTTTGCCTAAGAT 59.178 45.455 0.22 0.00 35.80 2.40
2227 2395 3.366679 CCAAGTGTGCTTTGCCTAAGATG 60.367 47.826 0.22 0.00 35.80 2.90
2228 2396 3.146104 AGTGTGCTTTGCCTAAGATGT 57.854 42.857 0.22 0.00 35.80 3.06
2229 2397 2.816087 AGTGTGCTTTGCCTAAGATGTG 59.184 45.455 0.22 0.00 35.80 3.21
2230 2398 2.095059 GTGTGCTTTGCCTAAGATGTGG 60.095 50.000 0.22 0.00 35.80 4.17
2236 2404 3.882131 GCCTAAGATGTGGCTGGAA 57.118 52.632 0.00 0.00 45.26 3.53
2237 2405 1.383523 GCCTAAGATGTGGCTGGAAC 58.616 55.000 0.00 0.00 45.26 3.62
2238 2406 2.019156 GCCTAAGATGTGGCTGGAACC 61.019 57.143 0.00 0.00 45.26 3.62
2239 2407 1.281867 CCTAAGATGTGGCTGGAACCA 59.718 52.381 0.00 0.00 37.38 3.67
2240 2408 2.290896 CCTAAGATGTGGCTGGAACCAA 60.291 50.000 0.00 0.00 42.70 3.67
2241 2409 2.380064 AAGATGTGGCTGGAACCAAA 57.620 45.000 0.00 0.00 42.70 3.28
2242 2410 1.620822 AGATGTGGCTGGAACCAAAC 58.379 50.000 0.00 0.00 42.70 2.93
2243 2411 1.133513 AGATGTGGCTGGAACCAAACA 60.134 47.619 0.00 1.23 42.70 2.83
2244 2412 1.000274 GATGTGGCTGGAACCAAACAC 60.000 52.381 15.73 15.73 42.70 3.32
2245 2413 0.033601 TGTGGCTGGAACCAAACACT 60.034 50.000 20.14 0.00 42.70 3.55
2246 2414 0.668535 GTGGCTGGAACCAAACACTC 59.331 55.000 15.47 0.00 42.70 3.51
2247 2415 0.257328 TGGCTGGAACCAAACACTCA 59.743 50.000 0.00 0.00 36.55 3.41
2248 2416 0.668535 GGCTGGAACCAAACACTCAC 59.331 55.000 0.00 0.00 0.00 3.51
2249 2417 0.668535 GCTGGAACCAAACACTCACC 59.331 55.000 0.00 0.00 0.00 4.02
2250 2418 1.750682 GCTGGAACCAAACACTCACCT 60.751 52.381 0.00 0.00 0.00 4.00
2251 2419 2.486548 GCTGGAACCAAACACTCACCTA 60.487 50.000 0.00 0.00 0.00 3.08
2252 2420 3.815809 CTGGAACCAAACACTCACCTAA 58.184 45.455 0.00 0.00 0.00 2.69
2253 2421 3.815401 CTGGAACCAAACACTCACCTAAG 59.185 47.826 0.00 0.00 0.00 2.18
2254 2422 3.201266 TGGAACCAAACACTCACCTAAGT 59.799 43.478 0.00 0.00 0.00 2.24
2255 2423 4.204799 GGAACCAAACACTCACCTAAGTT 58.795 43.478 0.00 0.00 0.00 2.66
2256 2424 4.036380 GGAACCAAACACTCACCTAAGTTG 59.964 45.833 0.00 0.00 0.00 3.16
2257 2425 3.551846 ACCAAACACTCACCTAAGTTGG 58.448 45.455 0.00 0.00 0.00 3.77
2258 2426 3.053917 ACCAAACACTCACCTAAGTTGGT 60.054 43.478 0.00 0.00 41.77 3.67
2259 2427 3.564225 CCAAACACTCACCTAAGTTGGTC 59.436 47.826 0.00 0.00 38.45 4.02
2260 2428 4.196193 CAAACACTCACCTAAGTTGGTCA 58.804 43.478 0.00 0.00 38.45 4.02
2261 2429 4.497291 AACACTCACCTAAGTTGGTCAA 57.503 40.909 0.00 0.00 38.45 3.18
2262 2430 4.497291 ACACTCACCTAAGTTGGTCAAA 57.503 40.909 0.00 0.00 38.45 2.69
2263 2431 4.196971 ACACTCACCTAAGTTGGTCAAAC 58.803 43.478 0.00 0.00 38.45 2.93
2264 2432 4.196193 CACTCACCTAAGTTGGTCAAACA 58.804 43.478 0.00 0.00 41.61 2.83
2265 2433 4.821805 CACTCACCTAAGTTGGTCAAACAT 59.178 41.667 0.00 0.00 41.61 2.71
2266 2434 4.821805 ACTCACCTAAGTTGGTCAAACATG 59.178 41.667 0.00 0.00 41.61 3.21
2267 2435 3.568007 TCACCTAAGTTGGTCAAACATGC 59.432 43.478 0.00 0.00 41.61 4.06
2268 2436 2.890945 ACCTAAGTTGGTCAAACATGCC 59.109 45.455 0.00 0.00 41.61 4.40
2269 2437 3.157087 CCTAAGTTGGTCAAACATGCCT 58.843 45.455 0.00 0.00 41.61 4.75
2270 2438 4.202524 ACCTAAGTTGGTCAAACATGCCTA 60.203 41.667 0.00 0.00 41.61 3.93
2271 2439 4.764823 CCTAAGTTGGTCAAACATGCCTAA 59.235 41.667 0.00 0.00 41.61 2.69
2272 2440 4.584327 AAGTTGGTCAAACATGCCTAAC 57.416 40.909 0.00 0.00 41.61 2.34
2273 2441 2.890945 AGTTGGTCAAACATGCCTAACC 59.109 45.455 0.00 0.00 41.61 2.85
2274 2442 2.890945 GTTGGTCAAACATGCCTAACCT 59.109 45.455 8.76 0.00 38.75 3.50
2275 2443 3.237268 TGGTCAAACATGCCTAACCTT 57.763 42.857 8.76 0.00 0.00 3.50
2276 2444 4.374689 TGGTCAAACATGCCTAACCTTA 57.625 40.909 8.76 0.00 0.00 2.69
2277 2445 4.331968 TGGTCAAACATGCCTAACCTTAG 58.668 43.478 8.76 0.00 0.00 2.18
2278 2446 8.232087 GTTGGTCAAACATGCCTAACCTTAGG 62.232 46.154 6.73 6.73 44.15 2.69
2286 2454 2.871096 CCTAACCTTAGGTGTGGCAA 57.129 50.000 3.99 0.00 44.26 4.52
2287 2455 3.149005 CCTAACCTTAGGTGTGGCAAA 57.851 47.619 3.99 0.00 44.26 3.68
2288 2456 2.817844 CCTAACCTTAGGTGTGGCAAAC 59.182 50.000 3.99 0.00 44.26 2.93
2289 2457 2.748209 AACCTTAGGTGTGGCAAACT 57.252 45.000 3.99 0.10 35.34 2.66
2290 2458 2.748209 ACCTTAGGTGTGGCAAACTT 57.252 45.000 1.74 2.12 32.98 2.66
2291 2459 3.868619 ACCTTAGGTGTGGCAAACTTA 57.131 42.857 1.74 0.96 32.98 2.24
2292 2460 3.751518 ACCTTAGGTGTGGCAAACTTAG 58.248 45.455 1.74 2.95 32.98 2.18
2293 2461 3.137728 ACCTTAGGTGTGGCAAACTTAGT 59.862 43.478 1.74 0.00 32.98 2.24
2294 2462 3.751698 CCTTAGGTGTGGCAAACTTAGTC 59.248 47.826 7.91 0.00 0.00 2.59
2295 2463 4.385825 CTTAGGTGTGGCAAACTTAGTCA 58.614 43.478 7.91 0.00 0.00 3.41
2296 2464 2.572290 AGGTGTGGCAAACTTAGTCAC 58.428 47.619 7.91 0.00 0.00 3.67
2297 2465 2.092646 AGGTGTGGCAAACTTAGTCACA 60.093 45.455 7.91 1.27 36.20 3.58
2298 2466 2.685897 GGTGTGGCAAACTTAGTCACAA 59.314 45.455 7.91 0.00 39.58 3.33
2299 2467 3.129638 GGTGTGGCAAACTTAGTCACAAA 59.870 43.478 7.91 0.00 39.58 2.83
2300 2468 4.102649 GTGTGGCAAACTTAGTCACAAAC 58.897 43.478 0.00 0.00 39.58 2.93
2301 2469 3.129638 TGTGGCAAACTTAGTCACAAACC 59.870 43.478 2.73 0.00 35.72 3.27
2302 2470 3.129638 GTGGCAAACTTAGTCACAAACCA 59.870 43.478 0.00 0.00 0.00 3.67
2303 2471 3.764434 TGGCAAACTTAGTCACAAACCAA 59.236 39.130 0.00 0.00 0.00 3.67
2304 2472 4.220821 TGGCAAACTTAGTCACAAACCAAA 59.779 37.500 0.00 0.00 0.00 3.28
2305 2473 4.565166 GGCAAACTTAGTCACAAACCAAAC 59.435 41.667 0.00 0.00 0.00 2.93
2306 2474 5.164954 GCAAACTTAGTCACAAACCAAACA 58.835 37.500 0.00 0.00 0.00 2.83
2307 2475 5.635700 GCAAACTTAGTCACAAACCAAACAA 59.364 36.000 0.00 0.00 0.00 2.83
2308 2476 6.400621 GCAAACTTAGTCACAAACCAAACAAC 60.401 38.462 0.00 0.00 0.00 3.32
2309 2477 5.319140 ACTTAGTCACAAACCAAACAACC 57.681 39.130 0.00 0.00 0.00 3.77
2310 2478 4.158949 ACTTAGTCACAAACCAAACAACCC 59.841 41.667 0.00 0.00 0.00 4.11
2311 2479 1.828595 AGTCACAAACCAAACAACCCC 59.171 47.619 0.00 0.00 0.00 4.95
2312 2480 1.134640 GTCACAAACCAAACAACCCCC 60.135 52.381 0.00 0.00 0.00 5.40
2313 2481 0.905357 CACAAACCAAACAACCCCCA 59.095 50.000 0.00 0.00 0.00 4.96
2314 2482 1.279271 CACAAACCAAACAACCCCCAA 59.721 47.619 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 144 9.790344 ATGATTATCTTATCTCAAAACAGGGAG 57.210 33.333 0.00 0.00 0.00 4.30
175 182 4.202060 GGCACGAATCAGAGATTCAGAGTA 60.202 45.833 17.08 0.00 0.00 2.59
183 190 1.139853 GGGAAGGCACGAATCAGAGAT 59.860 52.381 0.00 0.00 0.00 2.75
185 192 0.539051 AGGGAAGGCACGAATCAGAG 59.461 55.000 0.00 0.00 0.00 3.35
186 193 0.537188 GAGGGAAGGCACGAATCAGA 59.463 55.000 0.00 0.00 0.00 3.27
187 194 0.250234 TGAGGGAAGGCACGAATCAG 59.750 55.000 0.00 0.00 0.00 2.90
188 195 0.911769 ATGAGGGAAGGCACGAATCA 59.088 50.000 0.00 0.00 0.00 2.57
189 196 1.139853 AGATGAGGGAAGGCACGAATC 59.860 52.381 0.00 0.00 0.00 2.52
190 197 1.139853 GAGATGAGGGAAGGCACGAAT 59.860 52.381 0.00 0.00 0.00 3.34
191 198 0.537188 GAGATGAGGGAAGGCACGAA 59.463 55.000 0.00 0.00 0.00 3.85
192 199 0.324738 AGAGATGAGGGAAGGCACGA 60.325 55.000 0.00 0.00 0.00 4.35
193 200 0.179089 CAGAGATGAGGGAAGGCACG 60.179 60.000 0.00 0.00 0.00 5.34
224 231 6.740110 TCTCAACTCTGAAGAACTACTTGAC 58.260 40.000 0.00 0.00 39.13 3.18
408 498 8.643324 GTCTATCTTGTAACCTCACCTCATAAT 58.357 37.037 0.00 0.00 0.00 1.28
416 506 7.826918 ATAGGAGTCTATCTTGTAACCTCAC 57.173 40.000 0.00 0.00 30.80 3.51
560 650 3.441572 AGGTTCATCAGAAAATTGAGCGG 59.558 43.478 0.00 0.00 35.08 5.52
640 730 7.071698 TCCTCAACTATCAAAGATAGGAGCAAT 59.928 37.037 16.04 0.00 31.63 3.56
648 738 8.367660 ACTCAGTTCCTCAACTATCAAAGATA 57.632 34.615 0.00 0.00 41.24 1.98
722 813 5.181811 TGAAATGTATGCCTCAACAACTCTG 59.818 40.000 0.00 0.00 0.00 3.35
734 827 6.855836 TCTCACAAAGATTGAAATGTATGCC 58.144 36.000 0.00 0.00 0.00 4.40
758 852 7.587037 ACATCCCGTAATTTCATGATTTCAT 57.413 32.000 0.00 0.00 36.96 2.57
759 853 7.773224 AGTACATCCCGTAATTTCATGATTTCA 59.227 33.333 0.00 0.00 0.00 2.69
760 854 8.154649 AGTACATCCCGTAATTTCATGATTTC 57.845 34.615 0.00 0.00 0.00 2.17
761 855 7.042051 CGAGTACATCCCGTAATTTCATGATTT 60.042 37.037 0.00 0.00 0.00 2.17
762 856 6.423905 CGAGTACATCCCGTAATTTCATGATT 59.576 38.462 0.00 0.00 0.00 2.57
763 857 5.926542 CGAGTACATCCCGTAATTTCATGAT 59.073 40.000 0.00 0.00 0.00 2.45
764 858 5.163488 ACGAGTACATCCCGTAATTTCATGA 60.163 40.000 0.00 0.00 34.52 3.07
765 859 5.047847 ACGAGTACATCCCGTAATTTCATG 58.952 41.667 0.00 0.00 34.52 3.07
825 920 6.091713 CACAGGACCGTAGTTAAAATAGGTTG 59.908 42.308 0.00 0.00 31.35 3.77
828 923 5.727434 ACACAGGACCGTAGTTAAAATAGG 58.273 41.667 0.00 0.00 0.00 2.57
832 927 7.225784 TGTATACACAGGACCGTAGTTAAAA 57.774 36.000 0.08 0.00 0.00 1.52
952 1057 5.519927 GGATGAAATATTTGTTTCCGGCTTG 59.480 40.000 5.17 0.00 37.31 4.01
980 1085 1.173913 TGCGAGATGAGAAGTCCGAA 58.826 50.000 0.00 0.00 0.00 4.30
981 1086 1.173913 TTGCGAGATGAGAAGTCCGA 58.826 50.000 0.00 0.00 0.00 4.55
1065 1170 2.494504 GAAACAACTCGCGGCCTTCG 62.495 60.000 6.13 4.30 42.76 3.79
1299 1404 4.067896 CCATGTGTTACTTCTTCTGCTGT 58.932 43.478 0.00 0.00 0.00 4.40
1466 1580 2.928334 ACATGCTCACCAGATGATTCC 58.072 47.619 0.00 0.00 36.48 3.01
1571 1689 2.699846 ACATCAACAAACACATTGGGCT 59.300 40.909 0.00 0.00 43.66 5.19
1572 1690 3.059166 GACATCAACAAACACATTGGGC 58.941 45.455 0.00 0.00 43.66 5.36
1573 1691 4.050553 GTGACATCAACAAACACATTGGG 58.949 43.478 0.00 0.00 43.66 4.12
1676 1807 6.434340 ACCGCTATCACAGATCATACATCTAA 59.566 38.462 0.00 0.00 0.00 2.10
1741 1908 0.935898 GGATGCAAGCTCATCTCACG 59.064 55.000 13.43 0.00 41.83 4.35
1839 2007 8.902540 TGGGTAAATCACAAGCTAATATACTG 57.097 34.615 0.00 0.00 0.00 2.74
1845 2013 5.765510 TGGATGGGTAAATCACAAGCTAAT 58.234 37.500 0.00 0.00 31.12 1.73
1850 2018 5.829924 AGCTAATGGATGGGTAAATCACAAG 59.170 40.000 0.00 0.00 31.12 3.16
1859 2027 5.387113 AATCACAAGCTAATGGATGGGTA 57.613 39.130 0.00 0.00 0.00 3.69
1860 2028 3.959495 ATCACAAGCTAATGGATGGGT 57.041 42.857 0.00 0.00 0.00 4.51
1863 2031 5.593909 TGGGTAAATCACAAGCTAATGGATG 59.406 40.000 0.00 0.00 0.00 3.51
1864 2032 5.765510 TGGGTAAATCACAAGCTAATGGAT 58.234 37.500 0.00 0.00 0.00 3.41
1867 2035 5.277974 CGGATGGGTAAATCACAAGCTAATG 60.278 44.000 0.00 0.00 31.12 1.90
1868 2036 4.821805 CGGATGGGTAAATCACAAGCTAAT 59.178 41.667 0.00 0.00 31.12 1.73
1869 2037 4.196193 CGGATGGGTAAATCACAAGCTAA 58.804 43.478 0.00 0.00 31.12 3.09
1870 2038 3.199071 ACGGATGGGTAAATCACAAGCTA 59.801 43.478 0.00 0.00 31.12 3.32
1871 2039 2.026262 ACGGATGGGTAAATCACAAGCT 60.026 45.455 0.00 0.00 31.12 3.74
1872 2040 2.365582 ACGGATGGGTAAATCACAAGC 58.634 47.619 0.00 0.00 31.12 4.01
1873 2041 5.018539 TCTACGGATGGGTAAATCACAAG 57.981 43.478 0.00 0.00 31.12 3.16
1874 2042 5.623956 ATCTACGGATGGGTAAATCACAA 57.376 39.130 0.00 0.00 31.12 3.33
1875 2043 5.623956 AATCTACGGATGGGTAAATCACA 57.376 39.130 0.00 0.00 31.75 3.58
1876 2044 7.215085 ACTAAATCTACGGATGGGTAAATCAC 58.785 38.462 0.00 0.00 31.75 3.06
1877 2045 7.369551 ACTAAATCTACGGATGGGTAAATCA 57.630 36.000 0.00 0.00 31.75 2.57
1878 2046 8.033626 CCTACTAAATCTACGGATGGGTAAATC 58.966 40.741 0.00 0.00 31.75 2.17
1879 2047 7.526693 GCCTACTAAATCTACGGATGGGTAAAT 60.527 40.741 0.00 0.00 31.75 1.40
1880 2048 6.239402 GCCTACTAAATCTACGGATGGGTAAA 60.239 42.308 0.00 0.00 31.75 2.01
1881 2049 5.244626 GCCTACTAAATCTACGGATGGGTAA 59.755 44.000 0.00 0.00 31.75 2.85
1882 2050 4.768968 GCCTACTAAATCTACGGATGGGTA 59.231 45.833 0.00 0.00 31.75 3.69
1883 2051 3.577415 GCCTACTAAATCTACGGATGGGT 59.423 47.826 0.00 0.00 31.75 4.51
1884 2052 3.576982 TGCCTACTAAATCTACGGATGGG 59.423 47.826 0.00 0.00 31.75 4.00
1885 2053 4.322049 CCTGCCTACTAAATCTACGGATGG 60.322 50.000 0.00 0.00 31.75 3.51
1886 2054 4.810790 CCTGCCTACTAAATCTACGGATG 58.189 47.826 0.00 0.00 31.75 3.51
1887 2055 3.258622 GCCTGCCTACTAAATCTACGGAT 59.741 47.826 0.00 0.00 0.00 4.18
1888 2056 2.626743 GCCTGCCTACTAAATCTACGGA 59.373 50.000 0.00 0.00 0.00 4.69
1889 2057 2.364324 TGCCTGCCTACTAAATCTACGG 59.636 50.000 0.00 0.00 0.00 4.02
1890 2058 3.181479 TGTGCCTGCCTACTAAATCTACG 60.181 47.826 0.00 0.00 0.00 3.51
1891 2059 4.099573 TCTGTGCCTGCCTACTAAATCTAC 59.900 45.833 0.00 0.00 0.00 2.59
1892 2060 4.286707 TCTGTGCCTGCCTACTAAATCTA 58.713 43.478 0.00 0.00 0.00 1.98
1893 2061 3.107601 TCTGTGCCTGCCTACTAAATCT 58.892 45.455 0.00 0.00 0.00 2.40
1894 2062 3.543680 TCTGTGCCTGCCTACTAAATC 57.456 47.619 0.00 0.00 0.00 2.17
1895 2063 3.519510 TCTTCTGTGCCTGCCTACTAAAT 59.480 43.478 0.00 0.00 0.00 1.40
1896 2064 2.903784 TCTTCTGTGCCTGCCTACTAAA 59.096 45.455 0.00 0.00 0.00 1.85
1897 2065 2.536066 TCTTCTGTGCCTGCCTACTAA 58.464 47.619 0.00 0.00 0.00 2.24
1898 2066 2.231716 TCTTCTGTGCCTGCCTACTA 57.768 50.000 0.00 0.00 0.00 1.82
1899 2067 1.277557 CTTCTTCTGTGCCTGCCTACT 59.722 52.381 0.00 0.00 0.00 2.57
1900 2068 1.677217 CCTTCTTCTGTGCCTGCCTAC 60.677 57.143 0.00 0.00 0.00 3.18
1901 2069 0.615331 CCTTCTTCTGTGCCTGCCTA 59.385 55.000 0.00 0.00 0.00 3.93
1902 2070 1.377994 CCTTCTTCTGTGCCTGCCT 59.622 57.895 0.00 0.00 0.00 4.75
1903 2071 2.338785 GCCTTCTTCTGTGCCTGCC 61.339 63.158 0.00 0.00 0.00 4.85
1904 2072 1.303155 AGCCTTCTTCTGTGCCTGC 60.303 57.895 0.00 0.00 0.00 4.85
1905 2073 0.324285 AGAGCCTTCTTCTGTGCCTG 59.676 55.000 0.00 0.00 0.00 4.85
1906 2074 1.063183 AAGAGCCTTCTTCTGTGCCT 58.937 50.000 0.00 0.00 39.46 4.75
1907 2075 3.641017 AAGAGCCTTCTTCTGTGCC 57.359 52.632 0.00 0.00 39.46 5.01
1914 2082 1.063183 ACTGCCAGAAGAGCCTTCTT 58.937 50.000 12.98 1.59 46.22 2.52
1915 2083 0.324285 CACTGCCAGAAGAGCCTTCT 59.676 55.000 0.00 10.59 34.29 2.85
1916 2084 0.036022 ACACTGCCAGAAGAGCCTTC 59.964 55.000 0.00 6.79 0.00 3.46
1917 2085 0.250640 CACACTGCCAGAAGAGCCTT 60.251 55.000 0.00 0.00 0.00 4.35
1918 2086 1.374190 CACACTGCCAGAAGAGCCT 59.626 57.895 0.00 0.00 0.00 4.58
1919 2087 1.072159 ACACACTGCCAGAAGAGCC 59.928 57.895 0.00 0.00 0.00 4.70
1920 2088 1.849976 GCACACACTGCCAGAAGAGC 61.850 60.000 0.00 0.00 40.42 4.09
1921 2089 0.533531 TGCACACACTGCCAGAAGAG 60.534 55.000 0.00 0.00 46.51 2.85
1922 2090 0.109153 ATGCACACACTGCCAGAAGA 59.891 50.000 0.00 0.00 46.51 2.87
1923 2091 0.240145 CATGCACACACTGCCAGAAG 59.760 55.000 0.00 0.00 46.51 2.85
1924 2092 0.179023 TCATGCACACACTGCCAGAA 60.179 50.000 0.00 0.00 46.51 3.02
1925 2093 0.037160 ATCATGCACACACTGCCAGA 59.963 50.000 0.00 0.00 46.51 3.86
1926 2094 0.885879 AATCATGCACACACTGCCAG 59.114 50.000 0.00 0.00 46.51 4.85
1927 2095 0.883153 GAATCATGCACACACTGCCA 59.117 50.000 0.00 0.00 46.51 4.92
1928 2096 0.179181 CGAATCATGCACACACTGCC 60.179 55.000 0.00 0.00 46.51 4.85
1930 2098 2.975410 AACGAATCATGCACACACTG 57.025 45.000 0.00 0.00 0.00 3.66
1931 2099 2.877786 TGAAACGAATCATGCACACACT 59.122 40.909 0.00 0.00 0.00 3.55
1932 2100 2.973224 GTGAAACGAATCATGCACACAC 59.027 45.455 0.00 0.00 0.00 3.82
1933 2101 3.266541 GTGAAACGAATCATGCACACA 57.733 42.857 0.00 0.00 0.00 3.72
1949 2117 2.349060 GCAATGTACTTTCACGCGTGAA 60.349 45.455 42.01 42.01 46.72 3.18
1950 2118 1.193650 GCAATGTACTTTCACGCGTGA 59.806 47.619 36.40 36.40 37.91 4.35
1951 2119 1.591248 GCAATGTACTTTCACGCGTG 58.409 50.000 32.76 32.76 0.00 5.34
1952 2120 0.162933 CGCAATGTACTTTCACGCGT 59.837 50.000 5.58 5.58 37.61 6.01
1953 2121 1.120147 GCGCAATGTACTTTCACGCG 61.120 55.000 17.23 16.53 41.92 6.01
1954 2122 0.793104 GGCGCAATGTACTTTCACGC 60.793 55.000 21.12 21.12 43.80 5.34
1955 2123 0.179200 GGGCGCAATGTACTTTCACG 60.179 55.000 10.83 8.35 0.00 4.35
1956 2124 1.165270 AGGGCGCAATGTACTTTCAC 58.835 50.000 10.83 0.00 0.00 3.18
1957 2125 2.352388 GTAGGGCGCAATGTACTTTCA 58.648 47.619 10.83 0.00 0.00 2.69
1958 2126 1.326548 CGTAGGGCGCAATGTACTTTC 59.673 52.381 10.83 0.00 0.00 2.62
1959 2127 1.066716 TCGTAGGGCGCAATGTACTTT 60.067 47.619 10.83 0.00 41.07 2.66
1960 2128 0.533491 TCGTAGGGCGCAATGTACTT 59.467 50.000 10.83 0.00 41.07 2.24
1961 2129 0.750850 ATCGTAGGGCGCAATGTACT 59.249 50.000 10.83 0.00 41.07 2.73
1962 2130 2.427232 TATCGTAGGGCGCAATGTAC 57.573 50.000 10.83 3.64 41.07 2.90
1963 2131 2.353307 CCATATCGTAGGGCGCAATGTA 60.353 50.000 10.83 0.00 41.07 2.29
1964 2132 1.608025 CCATATCGTAGGGCGCAATGT 60.608 52.381 10.83 0.00 41.07 2.71
1965 2133 1.078709 CCATATCGTAGGGCGCAATG 58.921 55.000 10.83 0.00 41.07 2.82
1966 2134 0.973632 TCCATATCGTAGGGCGCAAT 59.026 50.000 10.83 0.00 41.07 3.56
1967 2135 0.973632 ATCCATATCGTAGGGCGCAA 59.026 50.000 10.83 0.00 41.07 4.85
1968 2136 1.842052 TATCCATATCGTAGGGCGCA 58.158 50.000 10.83 0.00 41.07 6.09
1969 2137 2.361119 TGATATCCATATCGTAGGGCGC 59.639 50.000 0.00 0.00 41.55 6.53
1970 2138 4.855715 ATGATATCCATATCGTAGGGCG 57.144 45.455 0.00 0.00 41.55 6.13
1971 2139 6.161855 TGAATGATATCCATATCGTAGGGC 57.838 41.667 0.00 0.00 41.55 5.19
1972 2140 7.555965 TGTTGAATGATATCCATATCGTAGGG 58.444 38.462 0.00 0.00 41.55 3.53
1973 2141 8.873830 GTTGTTGAATGATATCCATATCGTAGG 58.126 37.037 0.00 0.00 41.55 3.18
1974 2142 8.587111 CGTTGTTGAATGATATCCATATCGTAG 58.413 37.037 0.00 0.00 41.55 3.51
1975 2143 7.062956 GCGTTGTTGAATGATATCCATATCGTA 59.937 37.037 0.00 0.00 41.55 3.43
1976 2144 6.128553 GCGTTGTTGAATGATATCCATATCGT 60.129 38.462 0.00 0.00 41.55 3.73
1977 2145 6.128580 TGCGTTGTTGAATGATATCCATATCG 60.129 38.462 0.00 0.00 41.55 2.92
1978 2146 7.132694 TGCGTTGTTGAATGATATCCATATC 57.867 36.000 0.00 0.23 39.62 1.63
1979 2147 7.509141 TTGCGTTGTTGAATGATATCCATAT 57.491 32.000 0.00 0.00 34.45 1.78
1980 2148 6.934048 TTGCGTTGTTGAATGATATCCATA 57.066 33.333 0.00 0.00 34.45 2.74
1981 2149 5.833406 TTGCGTTGTTGAATGATATCCAT 57.167 34.783 0.00 0.00 36.99 3.41
1982 2150 5.125257 ACATTGCGTTGTTGAATGATATCCA 59.875 36.000 0.00 0.00 32.47 3.41
1983 2151 5.456497 CACATTGCGTTGTTGAATGATATCC 59.544 40.000 0.00 0.00 32.47 2.59
1984 2152 6.257423 TCACATTGCGTTGTTGAATGATATC 58.743 36.000 0.00 0.00 32.47 1.63
1985 2153 6.193514 TCACATTGCGTTGTTGAATGATAT 57.806 33.333 0.00 0.00 32.47 1.63
1986 2154 5.391843 CCTCACATTGCGTTGTTGAATGATA 60.392 40.000 0.00 0.00 32.47 2.15
1987 2155 4.478699 CTCACATTGCGTTGTTGAATGAT 58.521 39.130 0.00 0.00 32.47 2.45
1988 2156 3.304592 CCTCACATTGCGTTGTTGAATGA 60.305 43.478 0.00 0.00 32.47 2.57
1989 2157 2.981805 CCTCACATTGCGTTGTTGAATG 59.018 45.455 0.00 0.00 33.99 2.67
1990 2158 2.622942 ACCTCACATTGCGTTGTTGAAT 59.377 40.909 0.00 0.00 0.00 2.57
1991 2159 2.020720 ACCTCACATTGCGTTGTTGAA 58.979 42.857 0.00 0.00 0.00 2.69
1992 2160 1.601903 GACCTCACATTGCGTTGTTGA 59.398 47.619 0.00 0.00 0.00 3.18
1993 2161 1.660052 CGACCTCACATTGCGTTGTTG 60.660 52.381 0.00 0.00 0.00 3.33
1994 2162 0.586319 CGACCTCACATTGCGTTGTT 59.414 50.000 0.00 0.00 0.00 2.83
1995 2163 0.531974 ACGACCTCACATTGCGTTGT 60.532 50.000 0.00 0.00 0.00 3.32
1996 2164 0.586319 AACGACCTCACATTGCGTTG 59.414 50.000 0.00 0.00 42.68 4.10
1997 2165 2.157834 TAACGACCTCACATTGCGTT 57.842 45.000 0.00 0.00 45.62 4.84
1998 2166 2.268298 GATAACGACCTCACATTGCGT 58.732 47.619 0.00 0.00 36.68 5.24
1999 2167 1.255342 CGATAACGACCTCACATTGCG 59.745 52.381 0.00 0.00 42.66 4.85
2000 2168 2.536365 TCGATAACGACCTCACATTGC 58.464 47.619 0.00 0.00 43.81 3.56
2001 2169 9.380965 CATCGATTCGATAACGACCTCACATTG 62.381 44.444 20.34 1.46 45.19 2.82
2002 2170 7.490549 CATCGATTCGATAACGACCTCACATT 61.491 42.308 20.34 0.00 45.19 2.71
2003 2171 6.069213 CATCGATTCGATAACGACCTCACAT 61.069 44.000 20.34 0.00 45.19 3.21
2004 2172 4.788521 CATCGATTCGATAACGACCTCACA 60.789 45.833 20.34 0.00 45.19 3.58
2005 2173 3.664486 CATCGATTCGATAACGACCTCAC 59.336 47.826 20.34 0.00 45.19 3.51
2006 2174 3.304458 CCATCGATTCGATAACGACCTCA 60.304 47.826 20.34 0.00 45.19 3.86
2007 2175 3.235195 CCATCGATTCGATAACGACCTC 58.765 50.000 20.34 0.00 45.19 3.85
2008 2176 2.621998 ACCATCGATTCGATAACGACCT 59.378 45.455 20.34 0.00 45.19 3.85
2009 2177 3.009301 ACCATCGATTCGATAACGACC 57.991 47.619 20.34 0.00 45.19 4.79
2010 2178 3.596982 CGTACCATCGATTCGATAACGAC 59.403 47.826 28.35 19.76 45.19 4.34
2011 2179 3.248363 ACGTACCATCGATTCGATAACGA 59.752 43.478 33.44 16.94 45.19 3.85
2012 2180 3.548587 ACGTACCATCGATTCGATAACG 58.451 45.455 29.35 29.35 45.19 3.18
2013 2181 4.530388 TGACGTACCATCGATTCGATAAC 58.470 43.478 20.34 16.51 45.19 1.89
2014 2182 4.816786 TGACGTACCATCGATTCGATAA 57.183 40.909 20.34 7.41 45.19 1.75
2015 2183 4.142752 GGATGACGTACCATCGATTCGATA 60.143 45.833 20.34 3.66 45.19 2.92
2017 2185 2.031420 GGATGACGTACCATCGATTCGA 60.031 50.000 11.73 11.73 42.83 3.71
2018 2186 2.287368 TGGATGACGTACCATCGATTCG 60.287 50.000 10.19 0.00 42.83 3.34
2019 2187 3.004419 TCTGGATGACGTACCATCGATTC 59.996 47.826 10.19 0.00 42.83 2.52
2020 2188 2.956333 TCTGGATGACGTACCATCGATT 59.044 45.455 10.19 0.00 42.83 3.34
2021 2189 2.583143 TCTGGATGACGTACCATCGAT 58.417 47.619 10.19 0.00 42.83 3.59
2022 2190 2.047002 TCTGGATGACGTACCATCGA 57.953 50.000 10.19 6.49 42.83 3.59
2023 2191 2.293399 TGATCTGGATGACGTACCATCG 59.707 50.000 10.19 0.19 42.83 3.84
2024 2192 3.553096 GGTGATCTGGATGACGTACCATC 60.553 52.174 8.37 8.37 41.56 3.51
2025 2193 2.365617 GGTGATCTGGATGACGTACCAT 59.634 50.000 8.64 0.00 35.54 3.55
2026 2194 1.754803 GGTGATCTGGATGACGTACCA 59.245 52.381 8.05 8.05 34.81 3.25
2027 2195 1.269102 CGGTGATCTGGATGACGTACC 60.269 57.143 0.00 0.00 0.00 3.34
2028 2196 1.404391 ACGGTGATCTGGATGACGTAC 59.596 52.381 0.00 0.00 0.00 3.67
2029 2197 1.674441 GACGGTGATCTGGATGACGTA 59.326 52.381 0.00 0.00 0.00 3.57
2030 2198 0.456221 GACGGTGATCTGGATGACGT 59.544 55.000 0.00 0.00 0.00 4.34
2031 2199 0.455815 TGACGGTGATCTGGATGACG 59.544 55.000 0.00 0.00 0.00 4.35
2032 2200 2.101415 TGATGACGGTGATCTGGATGAC 59.899 50.000 8.98 0.00 0.00 3.06
2033 2201 2.387757 TGATGACGGTGATCTGGATGA 58.612 47.619 8.98 0.00 0.00 2.92
2034 2202 2.896745 TGATGACGGTGATCTGGATG 57.103 50.000 8.98 0.00 0.00 3.51
2035 2203 2.103771 CCTTGATGACGGTGATCTGGAT 59.896 50.000 8.98 0.00 0.00 3.41
2036 2204 1.482182 CCTTGATGACGGTGATCTGGA 59.518 52.381 8.98 0.00 0.00 3.86
2037 2205 1.473965 CCCTTGATGACGGTGATCTGG 60.474 57.143 8.98 10.19 0.00 3.86
2038 2206 1.473965 CCCCTTGATGACGGTGATCTG 60.474 57.143 8.98 2.46 0.00 2.90
2039 2207 0.833287 CCCCTTGATGACGGTGATCT 59.167 55.000 8.98 0.00 0.00 2.75
2040 2208 0.815615 GCCCCTTGATGACGGTGATC 60.816 60.000 0.25 0.25 0.00 2.92
2041 2209 1.224592 GCCCCTTGATGACGGTGAT 59.775 57.895 0.00 0.00 0.00 3.06
2042 2210 1.918293 AGCCCCTTGATGACGGTGA 60.918 57.895 0.00 0.00 0.00 4.02
2043 2211 1.746615 CAGCCCCTTGATGACGGTG 60.747 63.158 0.00 0.00 0.00 4.94
2044 2212 1.779061 AACAGCCCCTTGATGACGGT 61.779 55.000 0.00 0.00 0.00 4.83
2045 2213 0.609131 AAACAGCCCCTTGATGACGG 60.609 55.000 0.00 0.00 0.00 4.79
2046 2214 0.523072 CAAACAGCCCCTTGATGACG 59.477 55.000 0.00 0.00 0.00 4.35
2047 2215 0.890683 CCAAACAGCCCCTTGATGAC 59.109 55.000 0.00 0.00 0.00 3.06
2048 2216 0.482446 ACCAAACAGCCCCTTGATGA 59.518 50.000 0.00 0.00 0.00 2.92
2049 2217 1.341080 AACCAAACAGCCCCTTGATG 58.659 50.000 0.00 0.00 0.00 3.07
2050 2218 2.101640 AAACCAAACAGCCCCTTGAT 57.898 45.000 0.00 0.00 0.00 2.57
2051 2219 1.872773 AAAACCAAACAGCCCCTTGA 58.127 45.000 0.00 0.00 0.00 3.02
2052 2220 2.037121 CCTAAAACCAAACAGCCCCTTG 59.963 50.000 0.00 0.00 0.00 3.61
2053 2221 2.325484 CCTAAAACCAAACAGCCCCTT 58.675 47.619 0.00 0.00 0.00 3.95
2054 2222 2.009681 CCTAAAACCAAACAGCCCCT 57.990 50.000 0.00 0.00 0.00 4.79
2055 2223 0.320374 GCCTAAAACCAAACAGCCCC 59.680 55.000 0.00 0.00 0.00 5.80
2056 2224 0.320374 GGCCTAAAACCAAACAGCCC 59.680 55.000 0.00 0.00 32.68 5.19
2057 2225 1.338107 AGGCCTAAAACCAAACAGCC 58.662 50.000 1.29 0.00 39.25 4.85
2058 2226 2.094700 GCTAGGCCTAAAACCAAACAGC 60.095 50.000 14.85 7.54 0.00 4.40
2059 2227 3.153919 TGCTAGGCCTAAAACCAAACAG 58.846 45.455 14.85 0.19 0.00 3.16
2060 2228 3.231207 TGCTAGGCCTAAAACCAAACA 57.769 42.857 14.85 0.00 0.00 2.83
2061 2229 4.494484 CAATGCTAGGCCTAAAACCAAAC 58.506 43.478 14.85 0.00 0.00 2.93
2062 2230 3.056179 GCAATGCTAGGCCTAAAACCAAA 60.056 43.478 14.85 0.00 0.00 3.28
2063 2231 2.495669 GCAATGCTAGGCCTAAAACCAA 59.504 45.455 14.85 0.00 0.00 3.67
2064 2232 2.099405 GCAATGCTAGGCCTAAAACCA 58.901 47.619 14.85 9.02 0.00 3.67
2065 2233 1.409064 GGCAATGCTAGGCCTAAAACC 59.591 52.381 14.85 6.09 46.74 3.27
2066 2234 2.871182 GGCAATGCTAGGCCTAAAAC 57.129 50.000 14.85 7.04 46.74 2.43
2073 2241 0.890683 AAAGTGTGGCAATGCTAGGC 59.109 50.000 4.82 0.00 0.00 3.93
2074 2242 2.927871 GCAAAAGTGTGGCAATGCTAGG 60.928 50.000 4.82 0.00 0.00 3.02
2075 2243 2.331194 GCAAAAGTGTGGCAATGCTAG 58.669 47.619 4.82 0.00 0.00 3.42
2076 2244 1.000731 GGCAAAAGTGTGGCAATGCTA 59.999 47.619 4.82 0.00 43.33 3.49
2077 2245 0.249996 GGCAAAAGTGTGGCAATGCT 60.250 50.000 4.82 0.00 43.33 3.79
2078 2246 2.237416 GGCAAAAGTGTGGCAATGC 58.763 52.632 0.00 0.00 43.33 3.56
2083 2251 0.104671 ATGTGTGGCAAAAGTGTGGC 59.895 50.000 0.00 0.00 44.09 5.01
2084 2252 2.600470 AATGTGTGGCAAAAGTGTGG 57.400 45.000 0.00 0.00 0.00 4.17
2085 2253 4.153835 ACAAAAATGTGTGGCAAAAGTGTG 59.846 37.500 0.00 0.00 0.00 3.82
2086 2254 4.322567 ACAAAAATGTGTGGCAAAAGTGT 58.677 34.783 0.00 0.00 0.00 3.55
2087 2255 4.391216 TGACAAAAATGTGTGGCAAAAGTG 59.609 37.500 0.00 0.00 26.90 3.16
2088 2256 4.573900 TGACAAAAATGTGTGGCAAAAGT 58.426 34.783 0.00 0.00 26.90 2.66
2089 2257 5.122082 ACTTGACAAAAATGTGTGGCAAAAG 59.878 36.000 0.00 0.00 42.11 2.27
2090 2258 4.999950 ACTTGACAAAAATGTGTGGCAAAA 59.000 33.333 0.00 0.00 42.11 2.44
2091 2259 4.573900 ACTTGACAAAAATGTGTGGCAAA 58.426 34.783 0.00 0.00 42.11 3.68
2092 2260 4.199432 ACTTGACAAAAATGTGTGGCAA 57.801 36.364 0.00 0.00 40.47 4.52
2093 2261 3.883830 ACTTGACAAAAATGTGTGGCA 57.116 38.095 0.00 0.00 0.00 4.92
2094 2262 4.727448 GCAAACTTGACAAAAATGTGTGGC 60.727 41.667 0.00 0.00 0.00 5.01
2095 2263 4.201802 GGCAAACTTGACAAAAATGTGTGG 60.202 41.667 0.00 0.00 35.83 4.17
2096 2264 4.630940 AGGCAAACTTGACAAAAATGTGTG 59.369 37.500 0.00 0.00 39.18 3.82
2097 2265 4.831107 AGGCAAACTTGACAAAAATGTGT 58.169 34.783 0.00 0.00 39.18 3.72
2098 2266 6.756074 TCTTAGGCAAACTTGACAAAAATGTG 59.244 34.615 0.00 0.00 39.18 3.21
2099 2267 6.872920 TCTTAGGCAAACTTGACAAAAATGT 58.127 32.000 0.00 0.00 39.18 2.71
2100 2268 7.951530 ATCTTAGGCAAACTTGACAAAAATG 57.048 32.000 0.00 0.00 39.18 2.32
2101 2269 9.696917 CTAATCTTAGGCAAACTTGACAAAAAT 57.303 29.630 0.00 0.00 39.18 1.82
2102 2270 8.691797 ACTAATCTTAGGCAAACTTGACAAAAA 58.308 29.630 0.00 0.00 39.18 1.94
2103 2271 8.232913 ACTAATCTTAGGCAAACTTGACAAAA 57.767 30.769 0.00 0.00 39.18 2.44
2104 2272 7.817418 ACTAATCTTAGGCAAACTTGACAAA 57.183 32.000 0.00 0.00 39.18 2.83
2105 2273 7.500892 TGAACTAATCTTAGGCAAACTTGACAA 59.499 33.333 0.00 0.00 39.18 3.18
2106 2274 6.995686 TGAACTAATCTTAGGCAAACTTGACA 59.004 34.615 0.00 0.00 39.18 3.58
2107 2275 7.435068 TGAACTAATCTTAGGCAAACTTGAC 57.565 36.000 2.29 0.00 35.08 3.18
2108 2276 7.882791 TGATGAACTAATCTTAGGCAAACTTGA 59.117 33.333 2.29 0.00 35.08 3.02
2109 2277 8.044060 TGATGAACTAATCTTAGGCAAACTTG 57.956 34.615 2.29 0.00 35.08 3.16
2110 2278 8.635765 TTGATGAACTAATCTTAGGCAAACTT 57.364 30.769 2.29 0.00 35.08 2.66
2111 2279 8.635765 TTTGATGAACTAATCTTAGGCAAACT 57.364 30.769 2.29 0.00 35.08 2.66
2112 2280 9.860898 ATTTTGATGAACTAATCTTAGGCAAAC 57.139 29.630 2.29 1.22 35.08 2.93
2120 2288 9.466497 TGGCTCTTATTTTGATGAACTAATCTT 57.534 29.630 0.00 0.00 0.00 2.40
2121 2289 8.897752 GTGGCTCTTATTTTGATGAACTAATCT 58.102 33.333 0.00 0.00 0.00 2.40
2122 2290 8.677300 TGTGGCTCTTATTTTGATGAACTAATC 58.323 33.333 0.00 0.00 0.00 1.75
2123 2291 8.579850 TGTGGCTCTTATTTTGATGAACTAAT 57.420 30.769 0.00 0.00 0.00 1.73
2124 2292 7.994425 TGTGGCTCTTATTTTGATGAACTAA 57.006 32.000 0.00 0.00 0.00 2.24
2125 2293 7.665559 ACTTGTGGCTCTTATTTTGATGAACTA 59.334 33.333 0.00 0.00 0.00 2.24
2126 2294 6.491403 ACTTGTGGCTCTTATTTTGATGAACT 59.509 34.615 0.00 0.00 0.00 3.01
2127 2295 6.681777 ACTTGTGGCTCTTATTTTGATGAAC 58.318 36.000 0.00 0.00 0.00 3.18
2128 2296 6.899393 ACTTGTGGCTCTTATTTTGATGAA 57.101 33.333 0.00 0.00 0.00 2.57
2129 2297 6.294675 CCAACTTGTGGCTCTTATTTTGATGA 60.295 38.462 0.00 0.00 41.72 2.92
2130 2298 5.865552 CCAACTTGTGGCTCTTATTTTGATG 59.134 40.000 0.00 0.00 41.72 3.07
2131 2299 6.029346 CCAACTTGTGGCTCTTATTTTGAT 57.971 37.500 0.00 0.00 41.72 2.57
2132 2300 5.452078 CCAACTTGTGGCTCTTATTTTGA 57.548 39.130 0.00 0.00 41.72 2.69
2145 2313 1.270550 CCTTAGGCTTGCCAACTTGTG 59.729 52.381 14.54 0.00 0.00 3.33
2146 2314 1.620822 CCTTAGGCTTGCCAACTTGT 58.379 50.000 14.54 0.00 0.00 3.16
2147 2315 0.890683 CCCTTAGGCTTGCCAACTTG 59.109 55.000 14.54 0.00 0.00 3.16
2148 2316 0.251787 CCCCTTAGGCTTGCCAACTT 60.252 55.000 14.54 0.00 0.00 2.66
2149 2317 1.140134 TCCCCTTAGGCTTGCCAACT 61.140 55.000 14.54 0.00 34.51 3.16
2150 2318 0.033109 ATCCCCTTAGGCTTGCCAAC 60.033 55.000 14.54 0.00 34.51 3.77
2151 2319 0.258774 GATCCCCTTAGGCTTGCCAA 59.741 55.000 14.54 5.54 34.51 4.52
2152 2320 0.624500 AGATCCCCTTAGGCTTGCCA 60.625 55.000 14.54 0.00 34.51 4.92
2153 2321 0.553333 AAGATCCCCTTAGGCTTGCC 59.447 55.000 2.97 2.97 32.24 4.52
2154 2322 3.073062 TGATAAGATCCCCTTAGGCTTGC 59.927 47.826 0.00 0.00 40.40 4.01
2155 2323 4.103153 TGTGATAAGATCCCCTTAGGCTTG 59.897 45.833 0.00 0.00 40.40 4.01
2156 2324 4.103311 GTGTGATAAGATCCCCTTAGGCTT 59.897 45.833 0.00 0.00 40.40 4.35
2157 2325 3.648545 GTGTGATAAGATCCCCTTAGGCT 59.351 47.826 0.00 0.00 40.40 4.58
2158 2326 3.648545 AGTGTGATAAGATCCCCTTAGGC 59.351 47.826 0.00 0.00 40.40 3.93
2159 2327 5.896073 AAGTGTGATAAGATCCCCTTAGG 57.104 43.478 0.00 0.00 40.40 2.69
2160 2328 9.853177 ATAAAAAGTGTGATAAGATCCCCTTAG 57.147 33.333 0.00 0.00 40.40 2.18
2161 2329 9.627123 CATAAAAAGTGTGATAAGATCCCCTTA 57.373 33.333 0.00 0.00 41.23 2.69
2162 2330 8.116026 ACATAAAAAGTGTGATAAGATCCCCTT 58.884 33.333 0.00 0.00 38.87 3.95
2163 2331 7.643123 ACATAAAAAGTGTGATAAGATCCCCT 58.357 34.615 0.00 0.00 0.00 4.79
2164 2332 7.881775 ACATAAAAAGTGTGATAAGATCCCC 57.118 36.000 0.00 0.00 0.00 4.81
2177 2345 5.806502 CCACATGGCATACACATAAAAAGTG 59.193 40.000 0.00 0.00 42.56 3.16
2178 2346 5.105392 CCCACATGGCATACACATAAAAAGT 60.105 40.000 0.00 0.00 0.00 2.66
2179 2347 5.350633 CCCACATGGCATACACATAAAAAG 58.649 41.667 0.00 0.00 0.00 2.27
2180 2348 4.161189 CCCCACATGGCATACACATAAAAA 59.839 41.667 0.00 0.00 0.00 1.94
2181 2349 3.703556 CCCCACATGGCATACACATAAAA 59.296 43.478 0.00 0.00 0.00 1.52
2182 2350 3.295093 CCCCACATGGCATACACATAAA 58.705 45.455 0.00 0.00 0.00 1.40
2183 2351 2.942804 CCCCACATGGCATACACATAA 58.057 47.619 0.00 0.00 0.00 1.90
2184 2352 2.655090 CCCCACATGGCATACACATA 57.345 50.000 0.00 0.00 0.00 2.29
2185 2353 3.518766 CCCCACATGGCATACACAT 57.481 52.632 0.00 0.00 0.00 3.21
2194 2362 2.681064 CACTTGGGCCCCACATGG 60.681 66.667 22.27 5.25 30.78 3.66
2195 2363 2.118076 ACACTTGGGCCCCACATG 59.882 61.111 22.27 14.99 30.78 3.21
2196 2364 2.118076 CACACTTGGGCCCCACAT 59.882 61.111 22.27 0.00 30.78 3.21
2197 2365 4.912395 GCACACTTGGGCCCCACA 62.912 66.667 22.27 1.50 38.87 4.17
2203 2371 2.029518 GGCAAAGCACACTTGGGC 59.970 61.111 0.00 0.00 44.36 5.36
2204 2372 1.270550 CTTAGGCAAAGCACACTTGGG 59.729 52.381 0.00 0.00 35.85 4.12
2205 2373 2.229792 TCTTAGGCAAAGCACACTTGG 58.770 47.619 0.00 0.00 35.85 3.61
2206 2374 3.254166 ACATCTTAGGCAAAGCACACTTG 59.746 43.478 0.00 0.00 35.85 3.16
2207 2375 3.254166 CACATCTTAGGCAAAGCACACTT 59.746 43.478 0.00 0.00 37.90 3.16
2208 2376 2.816087 CACATCTTAGGCAAAGCACACT 59.184 45.455 0.00 0.00 34.97 3.55
2209 2377 2.095059 CCACATCTTAGGCAAAGCACAC 60.095 50.000 0.00 0.00 34.97 3.82
2210 2378 2.161855 CCACATCTTAGGCAAAGCACA 58.838 47.619 0.00 0.00 34.97 4.57
2211 2379 2.927553 CCACATCTTAGGCAAAGCAC 57.072 50.000 0.00 0.00 34.97 4.40
2219 2387 1.281867 TGGTTCCAGCCACATCTTAGG 59.718 52.381 0.00 0.00 32.81 2.69
2220 2388 2.787473 TGGTTCCAGCCACATCTTAG 57.213 50.000 0.00 0.00 32.81 2.18
2221 2389 3.153919 GTTTGGTTCCAGCCACATCTTA 58.846 45.455 0.00 0.00 38.42 2.10
2222 2390 1.963515 GTTTGGTTCCAGCCACATCTT 59.036 47.619 0.00 0.00 38.42 2.40
2223 2391 1.133513 TGTTTGGTTCCAGCCACATCT 60.134 47.619 0.00 0.00 38.42 2.90
2224 2392 1.000274 GTGTTTGGTTCCAGCCACATC 60.000 52.381 13.97 3.40 38.42 3.06
2225 2393 1.039856 GTGTTTGGTTCCAGCCACAT 58.960 50.000 13.97 0.00 38.42 3.21
2226 2394 0.033601 AGTGTTTGGTTCCAGCCACA 60.034 50.000 18.25 9.65 38.42 4.17
2227 2395 0.668535 GAGTGTTTGGTTCCAGCCAC 59.331 55.000 12.09 12.09 38.42 5.01
2228 2396 0.257328 TGAGTGTTTGGTTCCAGCCA 59.743 50.000 0.00 0.00 36.62 4.75
2229 2397 0.668535 GTGAGTGTTTGGTTCCAGCC 59.331 55.000 0.00 0.00 0.00 4.85
2230 2398 0.668535 GGTGAGTGTTTGGTTCCAGC 59.331 55.000 0.00 0.00 0.00 4.85
2231 2399 2.348411 AGGTGAGTGTTTGGTTCCAG 57.652 50.000 0.00 0.00 0.00 3.86
2232 2400 3.201266 ACTTAGGTGAGTGTTTGGTTCCA 59.799 43.478 0.00 0.00 0.00 3.53
2233 2401 3.816994 ACTTAGGTGAGTGTTTGGTTCC 58.183 45.455 0.00 0.00 0.00 3.62
2234 2402 4.036380 CCAACTTAGGTGAGTGTTTGGTTC 59.964 45.833 0.00 0.00 0.00 3.62
2235 2403 3.951680 CCAACTTAGGTGAGTGTTTGGTT 59.048 43.478 0.00 0.00 0.00 3.67
2236 2404 3.053917 ACCAACTTAGGTGAGTGTTTGGT 60.054 43.478 0.00 0.00 41.30 3.67
2237 2405 3.551846 ACCAACTTAGGTGAGTGTTTGG 58.448 45.455 0.00 0.00 41.30 3.28
2238 2406 4.196193 TGACCAACTTAGGTGAGTGTTTG 58.804 43.478 0.00 0.00 43.38 2.93
2239 2407 4.497291 TGACCAACTTAGGTGAGTGTTT 57.503 40.909 0.00 0.00 43.38 2.83
2240 2408 4.497291 TTGACCAACTTAGGTGAGTGTT 57.503 40.909 0.00 0.00 43.38 3.32
2241 2409 4.196971 GTTTGACCAACTTAGGTGAGTGT 58.803 43.478 0.00 0.00 43.38 3.55
2242 2410 4.196193 TGTTTGACCAACTTAGGTGAGTG 58.804 43.478 0.00 0.00 43.38 3.51
2243 2411 4.497291 TGTTTGACCAACTTAGGTGAGT 57.503 40.909 0.00 0.00 43.38 3.41
2244 2412 4.320494 GCATGTTTGACCAACTTAGGTGAG 60.320 45.833 0.00 0.00 43.38 3.51
2245 2413 3.568007 GCATGTTTGACCAACTTAGGTGA 59.432 43.478 0.00 0.00 43.38 4.02
2246 2414 3.305335 GGCATGTTTGACCAACTTAGGTG 60.305 47.826 0.00 0.00 43.38 4.00
2247 2415 2.890945 GGCATGTTTGACCAACTTAGGT 59.109 45.455 0.00 0.00 46.82 3.08
2248 2416 3.157087 AGGCATGTTTGACCAACTTAGG 58.843 45.455 0.00 0.00 36.21 2.69
2249 2417 5.335661 GGTTAGGCATGTTTGACCAACTTAG 60.336 44.000 7.39 0.00 36.21 2.18
2250 2418 4.521256 GGTTAGGCATGTTTGACCAACTTA 59.479 41.667 7.39 0.00 36.21 2.24
2251 2419 3.320826 GGTTAGGCATGTTTGACCAACTT 59.679 43.478 7.39 0.00 36.21 2.66
2252 2420 2.890945 GGTTAGGCATGTTTGACCAACT 59.109 45.455 7.39 0.00 36.21 3.16
2253 2421 2.890945 AGGTTAGGCATGTTTGACCAAC 59.109 45.455 12.66 4.98 35.71 3.77
2254 2422 3.237268 AGGTTAGGCATGTTTGACCAA 57.763 42.857 12.66 0.00 0.00 3.67
2255 2423 2.969821 AGGTTAGGCATGTTTGACCA 57.030 45.000 12.66 0.00 0.00 4.02
2256 2424 3.694566 CCTAAGGTTAGGCATGTTTGACC 59.305 47.826 2.80 0.00 43.43 4.02
2257 2425 4.965119 CCTAAGGTTAGGCATGTTTGAC 57.035 45.455 2.80 0.00 43.43 3.18
2268 2436 3.751518 AGTTTGCCACACCTAAGGTTAG 58.248 45.455 0.00 0.00 31.02 2.34
2269 2437 3.868619 AGTTTGCCACACCTAAGGTTA 57.131 42.857 0.00 0.00 31.02 2.85
2270 2438 2.748209 AGTTTGCCACACCTAAGGTT 57.252 45.000 0.00 0.00 31.02 3.50
2271 2439 2.748209 AAGTTTGCCACACCTAAGGT 57.252 45.000 0.00 0.00 35.62 3.50
2272 2440 3.751518 ACTAAGTTTGCCACACCTAAGG 58.248 45.455 0.00 0.00 0.00 2.69
2273 2441 4.213482 GTGACTAAGTTTGCCACACCTAAG 59.787 45.833 0.00 0.00 0.00 2.18
2274 2442 4.131596 GTGACTAAGTTTGCCACACCTAA 58.868 43.478 0.00 0.00 0.00 2.69
2275 2443 3.134985 TGTGACTAAGTTTGCCACACCTA 59.865 43.478 2.58 0.00 33.42 3.08
2276 2444 2.092646 TGTGACTAAGTTTGCCACACCT 60.093 45.455 2.58 0.00 33.42 4.00
2277 2445 2.294074 TGTGACTAAGTTTGCCACACC 58.706 47.619 2.58 0.00 33.42 4.16
2278 2446 4.102649 GTTTGTGACTAAGTTTGCCACAC 58.897 43.478 5.99 4.92 37.46 3.82
2279 2447 3.129638 GGTTTGTGACTAAGTTTGCCACA 59.870 43.478 2.58 2.58 36.15 4.17
2280 2448 3.129638 TGGTTTGTGACTAAGTTTGCCAC 59.870 43.478 0.00 0.00 0.00 5.01
2281 2449 3.357203 TGGTTTGTGACTAAGTTTGCCA 58.643 40.909 0.00 0.00 0.00 4.92
2282 2450 4.379339 TTGGTTTGTGACTAAGTTTGCC 57.621 40.909 0.00 0.00 0.00 4.52
2283 2451 5.164954 TGTTTGGTTTGTGACTAAGTTTGC 58.835 37.500 0.00 0.00 29.89 3.68
2284 2452 6.090223 GGTTGTTTGGTTTGTGACTAAGTTTG 59.910 38.462 0.00 0.00 29.89 2.93
2285 2453 6.160684 GGTTGTTTGGTTTGTGACTAAGTTT 58.839 36.000 0.00 0.00 29.89 2.66
2286 2454 5.336929 GGGTTGTTTGGTTTGTGACTAAGTT 60.337 40.000 0.00 0.00 29.89 2.66
2287 2455 4.158949 GGGTTGTTTGGTTTGTGACTAAGT 59.841 41.667 0.00 0.00 29.89 2.24
2288 2456 4.440940 GGGGTTGTTTGGTTTGTGACTAAG 60.441 45.833 0.00 0.00 29.89 2.18
2289 2457 3.447944 GGGGTTGTTTGGTTTGTGACTAA 59.552 43.478 0.00 0.00 0.00 2.24
2290 2458 3.025262 GGGGTTGTTTGGTTTGTGACTA 58.975 45.455 0.00 0.00 0.00 2.59
2291 2459 1.828595 GGGGTTGTTTGGTTTGTGACT 59.171 47.619 0.00 0.00 0.00 3.41
2292 2460 1.134640 GGGGGTTGTTTGGTTTGTGAC 60.135 52.381 0.00 0.00 0.00 3.67
2293 2461 1.196012 GGGGGTTGTTTGGTTTGTGA 58.804 50.000 0.00 0.00 0.00 3.58
2294 2462 0.905357 TGGGGGTTGTTTGGTTTGTG 59.095 50.000 0.00 0.00 0.00 3.33
2295 2463 1.657804 TTGGGGGTTGTTTGGTTTGT 58.342 45.000 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.