Multiple sequence alignment - TraesCS6A01G300300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G300300 chr6A 100.000 4137 0 0 1 4137 533282395 533278259 0.000000e+00 7640.0
1 TraesCS6A01G300300 chr6A 94.828 58 2 1 2187 2243 533280159 533280102 5.700000e-14 89.8
2 TraesCS6A01G300300 chr6A 94.828 58 2 1 2237 2294 533280209 533280153 5.700000e-14 89.8
3 TraesCS6A01G300300 chr6B 85.256 1153 94 36 2237 3328 579406650 579405513 0.000000e+00 1118.0
4 TraesCS6A01G300300 chr6B 88.296 487 43 6 1407 1883 579407487 579407005 4.640000e-159 571.0
5 TraesCS6A01G300300 chr6B 82.143 700 56 36 2 671 579409002 579408342 1.690000e-148 536.0
6 TraesCS6A01G300300 chr6B 86.942 291 24 6 1968 2246 579406879 579406591 8.630000e-82 315.0
7 TraesCS6A01G300300 chr6B 82.353 306 32 15 1111 1406 579407834 579407541 3.190000e-61 246.0
8 TraesCS6A01G300300 chr6D 87.527 922 68 25 2240 3151 388098598 388099482 0.000000e+00 1022.0
9 TraesCS6A01G300300 chr6D 84.320 912 88 27 1092 1962 388097422 388098319 0.000000e+00 841.0
10 TraesCS6A01G300300 chr6D 77.621 992 72 66 8 957 388096359 388097242 8.100000e-127 464.0
11 TraesCS6A01G300300 chr6D 91.003 289 16 5 1962 2246 388098370 388098652 8.390000e-102 381.0
12 TraesCS6A01G300300 chr6D 80.911 461 60 14 3466 3902 388103023 388103479 5.120000e-89 339.0
13 TraesCS6A01G300300 chr6D 83.871 186 22 5 3901 4081 387989706 387989524 1.980000e-38 171.0
14 TraesCS6A01G300300 chr6D 93.617 47 3 0 980 1026 388097302 388097348 2.060000e-08 71.3
15 TraesCS6A01G300300 chr4D 100.000 30 0 0 3613 3642 247562064 247562093 5.780000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G300300 chr6A 533278259 533282395 4136 True 2606.533333 7640 96.552000 1 4137 3 chr6A.!!$R1 4136
1 TraesCS6A01G300300 chr6B 579405513 579409002 3489 True 557.200000 1118 84.998000 2 3328 5 chr6B.!!$R1 3326
2 TraesCS6A01G300300 chr6D 388096359 388103479 7120 False 519.716667 1022 85.833167 8 3902 6 chr6D.!!$F1 3894

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 677 0.037975 TCACCGGGAAAGTAAGCGAC 60.038 55.0 6.32 0.00 0.00 5.19 F
1770 2035 0.038526 ACTCGATTCGGCGTTTGAGT 60.039 50.0 21.49 21.49 32.79 3.41 F
2880 3317 0.032952 CTGCAAACAGGCAAGTGCAT 59.967 50.0 5.52 0.00 45.34 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2392 2788 0.030908 GCGGAGGGAAGTACATCTCG 59.969 60.0 0.0 0.00 0.00 4.04 R
3005 3467 0.112995 AGCCTGCCACCAGAAATTCA 59.887 50.0 0.0 0.00 41.77 2.57 R
4096 7884 0.179040 TTTGTTGACTCCGGGTGGTC 60.179 55.0 0.0 8.85 36.30 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.079127 CCCACGAGTCATGTCACCC 60.079 63.158 0.00 0.00 0.00 4.61
66 67 5.337554 CCATTGTCATGCAGATTACACAAG 58.662 41.667 0.00 0.00 0.00 3.16
73 74 2.480037 TGCAGATTACACAAGACAAGCG 59.520 45.455 0.00 0.00 0.00 4.68
124 125 4.156622 CGTCGACGTCGCTAGCCA 62.157 66.667 32.19 12.04 39.60 4.75
126 127 4.175489 TCGACGTCGCTAGCCAGC 62.175 66.667 32.19 0.00 44.90 4.85
128 129 4.129737 GACGTCGCTAGCCAGCCA 62.130 66.667 9.66 0.00 45.64 4.75
129 130 3.642778 GACGTCGCTAGCCAGCCAA 62.643 63.158 9.66 0.00 45.64 4.52
130 131 3.188786 CGTCGCTAGCCAGCCAAC 61.189 66.667 9.66 0.00 45.64 3.77
131 132 2.820037 GTCGCTAGCCAGCCAACC 60.820 66.667 9.66 0.00 45.64 3.77
132 133 4.096003 TCGCTAGCCAGCCAACCC 62.096 66.667 9.66 0.00 45.64 4.11
135 136 3.399181 CTAGCCAGCCAACCCCGA 61.399 66.667 0.00 0.00 0.00 5.14
136 137 2.690881 TAGCCAGCCAACCCCGAT 60.691 61.111 0.00 0.00 0.00 4.18
137 138 2.666596 CTAGCCAGCCAACCCCGATC 62.667 65.000 0.00 0.00 0.00 3.69
140 141 4.473520 CAGCCAACCCCGATCGCT 62.474 66.667 10.32 0.00 0.00 4.93
141 142 4.162690 AGCCAACCCCGATCGCTC 62.163 66.667 10.32 0.00 0.00 5.03
308 310 2.704616 GTCTCCGTCTCGCTCTCG 59.295 66.667 0.00 0.00 0.00 4.04
414 447 3.730761 GCTGCCGTGCAAGGTGAG 61.731 66.667 20.23 16.20 38.41 3.51
420 457 2.671177 CGTGCAAGGTGAGGAAGCG 61.671 63.158 0.00 0.00 0.00 4.68
424 461 1.738099 CAAGGTGAGGAAGCGTCGG 60.738 63.158 0.00 0.00 0.00 4.79
553 595 3.177194 TTAGGCCGGCCGATGGATG 62.177 63.158 38.88 10.02 41.95 3.51
618 661 2.845022 GCGTCGACGTACTCATACTCAC 60.845 54.545 35.48 13.07 42.22 3.51
628 671 3.705051 ACTCATACTCACCGGGAAAGTA 58.295 45.455 6.32 10.80 0.00 2.24
634 677 0.037975 TCACCGGGAAAGTAAGCGAC 60.038 55.000 6.32 0.00 0.00 5.19
635 678 1.017701 CACCGGGAAAGTAAGCGACC 61.018 60.000 6.32 0.00 0.00 4.79
663 706 2.461945 GCGCCTAACTCCTTTCGCC 61.462 63.158 0.00 0.00 37.02 5.54
697 740 1.813753 GGACGGCTAAGCATCGCAA 60.814 57.895 0.00 0.00 0.00 4.85
755 813 3.423154 CCAACAACTCGGCCGAGC 61.423 66.667 46.43 0.40 45.54 5.03
756 814 2.664851 CAACAACTCGGCCGAGCA 60.665 61.111 46.43 20.00 45.54 4.26
757 815 2.357517 AACAACTCGGCCGAGCAG 60.358 61.111 46.43 39.25 45.54 4.24
801 859 2.819595 AGTAGCATGTTGGGCGCG 60.820 61.111 0.00 0.00 36.08 6.86
802 860 3.876198 GTAGCATGTTGGGCGCGG 61.876 66.667 8.83 0.00 36.08 6.46
851 909 5.588648 CGATATAAGCTAGGAAGAGGAGGAG 59.411 48.000 0.00 0.00 0.00 3.69
852 910 6.577438 CGATATAAGCTAGGAAGAGGAGGAGA 60.577 46.154 0.00 0.00 0.00 3.71
876 934 4.451150 TGCTCCTGCCCGCTTACG 62.451 66.667 0.00 0.00 38.71 3.18
893 951 0.672342 ACGTACCTAATAGCCGCCAG 59.328 55.000 0.00 0.00 0.00 4.85
916 974 0.668706 TGTTCTGCTTGCTCGCTCTC 60.669 55.000 0.00 0.00 0.00 3.20
929 987 1.886777 GCTCTCATCGCTTCTGCCC 60.887 63.158 0.00 0.00 35.36 5.36
931 989 0.106335 CTCTCATCGCTTCTGCCCAT 59.894 55.000 0.00 0.00 35.36 4.00
940 998 2.040213 CTTCTGCCCATACGCGCTTG 62.040 60.000 5.73 3.51 0.00 4.01
949 1014 0.598680 ATACGCGCTTGATCTGCTCC 60.599 55.000 5.73 1.20 0.00 4.70
953 1018 1.066422 CGCTTGATCTGCTCCGCTA 59.934 57.895 9.02 0.00 0.00 4.26
1069 1183 2.846918 GCACGTGTCTGCTTCGTC 59.153 61.111 18.38 0.00 35.62 4.20
1070 1184 2.658707 GCACGTGTCTGCTTCGTCC 61.659 63.158 18.38 0.00 35.62 4.79
1076 1190 0.976641 TGTCTGCTTCGTCCAATCCT 59.023 50.000 0.00 0.00 0.00 3.24
1082 1196 2.224523 TGCTTCGTCCAATCCTCTTGTT 60.225 45.455 0.00 0.00 0.00 2.83
1084 1198 3.664107 CTTCGTCCAATCCTCTTGTTGA 58.336 45.455 0.00 0.00 0.00 3.18
1085 1199 3.319137 TCGTCCAATCCTCTTGTTGAG 57.681 47.619 0.00 0.00 42.30 3.02
1086 1200 1.734465 CGTCCAATCCTCTTGTTGAGC 59.266 52.381 0.00 0.00 41.35 4.26
1087 1201 2.613977 CGTCCAATCCTCTTGTTGAGCT 60.614 50.000 0.00 0.00 41.35 4.09
1089 1203 3.438434 GTCCAATCCTCTTGTTGAGCTTC 59.562 47.826 0.00 0.00 41.35 3.86
1102 1243 4.630069 TGTTGAGCTTCGTCTAATTAAGCC 59.370 41.667 6.32 0.65 45.32 4.35
1103 1244 3.444916 TGAGCTTCGTCTAATTAAGCCG 58.555 45.455 6.32 0.21 45.32 5.52
1121 1313 2.687805 GGGCCGGTCGCTTCTTTTC 61.688 63.158 1.90 0.00 37.74 2.29
1129 1324 0.670546 TCGCTTCTTTTCTCAGGCCG 60.671 55.000 0.00 0.00 0.00 6.13
1140 1335 1.572085 CTCAGGCCGCTCACTTTGTG 61.572 60.000 0.00 0.00 34.45 3.33
1150 1345 3.921969 CTCACTTTGTGATGAGCGATC 57.078 47.619 0.00 0.00 41.94 3.69
1218 1419 1.416401 GGCGAATCCAAGATCTACCCA 59.584 52.381 0.00 0.00 34.01 4.51
1220 1421 2.548920 GCGAATCCAAGATCTACCCAGG 60.549 54.545 0.00 0.00 0.00 4.45
1226 1427 1.051812 AAGATCTACCCAGGCCATCG 58.948 55.000 5.01 0.00 0.00 3.84
1252 1453 2.160417 GTGTTCTCGGCAAATCCAAGAG 59.840 50.000 0.00 0.00 34.01 2.85
1336 1537 0.944311 TTGGAAGAACGACGCTGCTC 60.944 55.000 0.00 0.00 0.00 4.26
1356 1557 1.179174 TCCTCCCGATGAGTATGCCG 61.179 60.000 0.00 0.00 39.65 5.69
1432 1692 0.515127 TTCAAATACGTGCAGGTGCG 59.485 50.000 21.78 7.64 45.83 5.34
1451 1711 1.266989 CGGAAGCAAAACTGTTCTCCC 59.733 52.381 0.00 0.00 0.00 4.30
1453 1713 1.613925 GAAGCAAAACTGTTCTCCCCC 59.386 52.381 0.00 0.00 0.00 5.40
1500 1760 0.179059 TCAGGCGTTTTCTGCTCACA 60.179 50.000 0.00 0.00 32.63 3.58
1513 1773 0.329596 GCTCACAAGAAGGGGGTCAT 59.670 55.000 0.00 0.00 0.00 3.06
1514 1774 1.559682 GCTCACAAGAAGGGGGTCATA 59.440 52.381 0.00 0.00 0.00 2.15
1515 1775 2.173569 GCTCACAAGAAGGGGGTCATAT 59.826 50.000 0.00 0.00 0.00 1.78
1520 1780 3.071602 ACAAGAAGGGGGTCATATCGATG 59.928 47.826 8.54 0.00 0.00 3.84
1527 1787 1.151668 GGTCATATCGATGCTGTGCC 58.848 55.000 8.54 8.75 32.62 5.01
1551 1811 1.638133 CAGGACGATCAGCACAAGAG 58.362 55.000 0.00 0.00 0.00 2.85
1570 1830 4.202441 AGAGCAGAGAGAGTGATCTTCTC 58.798 47.826 15.74 15.74 37.38 2.87
1610 1870 2.034878 TGGATGACTTGGAGGATCTCG 58.965 52.381 0.00 0.00 33.73 4.04
1612 1872 2.035321 GGATGACTTGGAGGATCTCGAC 59.965 54.545 0.00 0.00 33.73 4.20
1628 1888 0.168348 CGACACAGACCTGAGGTACG 59.832 60.000 2.97 0.31 35.25 3.67
1629 1889 1.245732 GACACAGACCTGAGGTACGT 58.754 55.000 2.97 1.08 35.25 3.57
1630 1890 2.430465 GACACAGACCTGAGGTACGTA 58.570 52.381 2.97 0.00 35.25 3.57
1631 1891 2.157738 ACACAGACCTGAGGTACGTAC 58.842 52.381 17.56 17.56 35.25 3.67
1632 1892 1.471684 CACAGACCTGAGGTACGTACC 59.528 57.143 33.16 33.16 46.82 3.34
1683 1948 1.802508 GCCTTGTGCAAGTGGTTGTTC 60.803 52.381 10.56 0.00 40.77 3.18
1770 2035 0.038526 ACTCGATTCGGCGTTTGAGT 60.039 50.000 21.49 21.49 32.79 3.41
1777 2042 0.899720 TCGGCGTTTGAGTTAGGGAT 59.100 50.000 6.85 0.00 0.00 3.85
1781 2046 2.483188 GGCGTTTGAGTTAGGGATCGAT 60.483 50.000 0.00 0.00 0.00 3.59
1784 2049 4.208666 GCGTTTGAGTTAGGGATCGATTAC 59.791 45.833 0.00 0.00 0.00 1.89
1787 2052 6.534079 CGTTTGAGTTAGGGATCGATTACTTT 59.466 38.462 0.00 0.00 0.00 2.66
1791 2056 7.434492 TGAGTTAGGGATCGATTACTTTGATC 58.566 38.462 0.00 0.00 42.49 2.92
1792 2057 7.069455 TGAGTTAGGGATCGATTACTTTGATCA 59.931 37.037 0.00 0.00 44.29 2.92
1803 2068 1.351017 ACTTTGATCACCCGATGTGGT 59.649 47.619 0.00 0.00 45.48 4.16
1808 2073 1.338136 ATCACCCGATGTGGTCCTCC 61.338 60.000 5.40 0.00 45.48 4.30
1894 2223 1.189403 GCGAACGATCAGGTACTTCG 58.811 55.000 6.76 6.76 43.48 3.79
1923 2252 2.956132 TCTTGCTGATTGTTTTCCCCA 58.044 42.857 0.00 0.00 0.00 4.96
1937 2266 5.649831 TGTTTTCCCCAAAATTTGAAGGTTG 59.350 36.000 7.37 0.00 33.98 3.77
1966 2346 3.252974 AGAGGATTTACAACCGCTGAG 57.747 47.619 0.00 0.00 35.20 3.35
1993 2373 7.719193 TCTTGGTTCATTATTTCTGACAAGACA 59.281 33.333 0.00 0.00 33.94 3.41
1997 2377 8.017946 GGTTCATTATTTCTGACAAGACACTTC 58.982 37.037 0.00 0.00 29.98 3.01
1998 2378 8.778358 GTTCATTATTTCTGACAAGACACTTCT 58.222 33.333 0.00 0.00 29.98 2.85
1999 2379 8.908786 TCATTATTTCTGACAAGACACTTCTT 57.091 30.769 0.00 0.00 43.35 2.52
2008 2388 2.528041 AGACACTTCTTGGTTCCGTC 57.472 50.000 0.00 0.00 0.00 4.79
2014 2394 0.326927 TTCTTGGTTCCGTCCCATCC 59.673 55.000 0.00 0.00 0.00 3.51
2022 2406 0.326143 TCCGTCCCATCCAGGAATCA 60.326 55.000 0.00 0.00 41.22 2.57
2032 2416 5.047519 CCCATCCAGGAATCATGCTAAATTC 60.048 44.000 0.00 0.00 41.22 2.17
2055 2451 4.631247 TCGCCTTGTGCAGCAGCT 62.631 61.111 1.76 0.00 42.74 4.24
2060 2456 0.107312 CCTTGTGCAGCAGCTATCCT 60.107 55.000 1.76 0.00 42.74 3.24
2077 2473 3.790089 TCCTGGAAGAAAGGAAAGGAC 57.210 47.619 0.00 0.00 40.95 3.85
2125 2521 1.134401 GTGGAGATCGAGCATTTCCCA 60.134 52.381 2.38 0.00 35.22 4.37
2126 2522 1.139654 TGGAGATCGAGCATTTCCCAG 59.860 52.381 2.38 0.00 35.22 4.45
2250 2646 2.905681 TGCTCGCTCCAGCATCAT 59.094 55.556 0.00 0.00 44.73 2.45
2251 2647 1.523032 TGCTCGCTCCAGCATCATG 60.523 57.895 0.00 0.00 44.73 3.07
2252 2648 1.523258 GCTCGCTCCAGCATCATGT 60.523 57.895 0.00 0.00 42.21 3.21
2253 2649 1.773054 GCTCGCTCCAGCATCATGTG 61.773 60.000 0.00 0.00 42.21 3.21
2263 2659 3.863942 CATCATGTGCAACGACGAG 57.136 52.632 0.00 0.00 42.39 4.18
2264 2660 1.349234 CATCATGTGCAACGACGAGA 58.651 50.000 0.00 0.00 42.39 4.04
2265 2661 1.322637 CATCATGTGCAACGACGAGAG 59.677 52.381 0.00 0.00 42.39 3.20
2266 2662 1.008875 TCATGTGCAACGACGAGAGC 61.009 55.000 0.00 2.75 42.39 4.09
2267 2663 1.006220 ATGTGCAACGACGAGAGCA 60.006 52.632 0.00 5.66 42.39 4.26
2268 2664 0.390340 ATGTGCAACGACGAGAGCAT 60.390 50.000 14.32 4.53 42.39 3.79
2269 2665 1.008875 TGTGCAACGACGAGAGCATC 61.009 55.000 14.32 9.94 42.39 3.91
2270 2666 1.008875 GTGCAACGACGAGAGCATCA 61.009 55.000 14.32 0.00 37.82 3.07
2271 2667 0.108662 TGCAACGACGAGAGCATCAT 60.109 50.000 0.00 0.00 37.82 2.45
2272 2668 0.299895 GCAACGACGAGAGCATCATG 59.700 55.000 0.00 0.00 37.82 3.07
2273 2669 1.633561 CAACGACGAGAGCATCATGT 58.366 50.000 0.00 0.00 37.82 3.21
2274 2670 1.585668 CAACGACGAGAGCATCATGTC 59.414 52.381 0.00 0.00 37.82 3.06
2275 2671 1.098869 ACGACGAGAGCATCATGTCT 58.901 50.000 0.00 0.00 38.75 3.41
2276 2672 1.474478 ACGACGAGAGCATCATGTCTT 59.526 47.619 0.00 0.00 38.75 3.01
2277 2673 2.115595 CGACGAGAGCATCATGTCTTC 58.884 52.381 0.00 0.00 38.75 2.87
2278 2674 2.468831 GACGAGAGCATCATGTCTTCC 58.531 52.381 0.00 0.00 38.15 3.46
2279 2675 2.100584 GACGAGAGCATCATGTCTTCCT 59.899 50.000 0.00 0.00 38.15 3.36
2280 2676 2.100584 ACGAGAGCATCATGTCTTCCTC 59.899 50.000 0.00 0.00 37.82 3.71
2281 2677 2.545532 CGAGAGCATCATGTCTTCCTCC 60.546 54.545 0.00 0.00 37.82 4.30
2282 2678 1.411977 AGAGCATCATGTCTTCCTCCG 59.588 52.381 0.00 0.00 37.82 4.63
2283 2679 0.179062 AGCATCATGTCTTCCTCCGC 60.179 55.000 0.00 0.00 0.00 5.54
2284 2680 0.179062 GCATCATGTCTTCCTCCGCT 60.179 55.000 0.00 0.00 0.00 5.52
2285 2681 1.579698 CATCATGTCTTCCTCCGCTG 58.420 55.000 0.00 0.00 0.00 5.18
2286 2682 0.179062 ATCATGTCTTCCTCCGCTGC 60.179 55.000 0.00 0.00 0.00 5.25
2287 2683 1.220206 CATGTCTTCCTCCGCTGCT 59.780 57.895 0.00 0.00 0.00 4.24
2288 2684 0.809241 CATGTCTTCCTCCGCTGCTC 60.809 60.000 0.00 0.00 0.00 4.26
2289 2685 2.202676 GTCTTCCTCCGCTGCTCG 60.203 66.667 0.00 0.00 38.08 5.03
2290 2686 4.135153 TCTTCCTCCGCTGCTCGC 62.135 66.667 0.00 0.00 36.73 5.03
2291 2687 4.140599 CTTCCTCCGCTGCTCGCT 62.141 66.667 0.00 0.00 36.73 4.93
2292 2688 4.135153 TTCCTCCGCTGCTCGCTC 62.135 66.667 0.00 0.00 36.73 5.03
2337 2733 3.062901 GCGTACGTTTCGACGAAGAATAG 60.063 47.826 17.90 4.67 41.60 1.73
2512 2923 0.395311 CCATGCACTCTGGCTCCAAT 60.395 55.000 0.00 0.00 34.04 3.16
2524 2941 4.073201 TCCAATGGGAGGAGGAGC 57.927 61.111 0.00 0.00 38.64 4.70
2554 2971 4.717629 CGTGAGAACGCTCGGCCA 62.718 66.667 2.24 0.00 44.33 5.36
2560 2977 3.701604 GAACGCTCGGCCATCGTCT 62.702 63.158 13.21 5.45 40.32 4.18
2666 3103 5.687730 CACTCTAACACCGTCTTGCATATAG 59.312 44.000 0.00 0.00 0.00 1.31
2679 3116 5.297527 TCTTGCATATAGCCTTGTTCATGTG 59.702 40.000 0.00 0.00 44.83 3.21
2680 3117 4.779696 TGCATATAGCCTTGTTCATGTGA 58.220 39.130 0.00 0.00 44.83 3.58
2681 3118 5.192176 TGCATATAGCCTTGTTCATGTGAA 58.808 37.500 0.00 0.00 44.83 3.18
2682 3119 5.829391 TGCATATAGCCTTGTTCATGTGAAT 59.171 36.000 0.00 0.00 44.83 2.57
2690 3127 7.056006 AGCCTTGTTCATGTGAATATGTGATA 58.944 34.615 0.00 0.00 36.33 2.15
2739 3176 5.209818 ACTGACCGAGTTCATCTTTGTAA 57.790 39.130 0.00 0.00 0.00 2.41
2740 3177 5.794894 ACTGACCGAGTTCATCTTTGTAAT 58.205 37.500 0.00 0.00 0.00 1.89
2747 3184 7.968405 ACCGAGTTCATCTTTGTAATAAAATGC 59.032 33.333 0.00 0.00 0.00 3.56
2763 3200 1.435515 TGCGGTTTTGCAGTTGGAC 59.564 52.632 0.00 0.00 40.62 4.02
2834 3271 2.203181 GGAGCAGAGGCATCAGGC 60.203 66.667 0.00 3.81 44.61 4.85
2847 3284 1.808945 CATCAGGCAGTGGAACAGAAC 59.191 52.381 0.00 0.00 41.80 3.01
2853 3290 1.227853 AGTGGAACAGAACGTGGGC 60.228 57.895 0.00 0.00 41.80 5.36
2880 3317 0.032952 CTGCAAACAGGCAAGTGCAT 59.967 50.000 5.52 0.00 45.34 3.96
2915 3367 2.854963 TGCATGTCAGCTTCTGAAACT 58.145 42.857 0.00 0.00 42.46 2.66
2916 3368 3.216800 TGCATGTCAGCTTCTGAAACTT 58.783 40.909 0.00 0.00 42.46 2.66
2930 3382 7.800847 GCTTCTGAAACTTTGTCTTCTGATAAC 59.199 37.037 0.00 0.00 31.95 1.89
2955 3407 2.457598 TCCTCCTCTGTTGCTACGATT 58.542 47.619 0.00 0.00 0.00 3.34
2959 3411 2.565391 TCCTCTGTTGCTACGATTGGAA 59.435 45.455 0.00 0.00 0.00 3.53
2960 3412 2.932614 CCTCTGTTGCTACGATTGGAAG 59.067 50.000 0.00 0.00 0.00 3.46
2961 3413 2.346803 TCTGTTGCTACGATTGGAAGC 58.653 47.619 0.00 3.22 36.77 3.86
2962 3414 1.061131 CTGTTGCTACGATTGGAAGCG 59.939 52.381 0.00 0.00 44.46 4.68
3008 3470 4.693532 GGTGCTGACCGTGATGAA 57.306 55.556 0.00 0.00 30.61 2.57
3009 3471 3.159298 GGTGCTGACCGTGATGAAT 57.841 52.632 0.00 0.00 30.61 2.57
3011 3473 1.812571 GGTGCTGACCGTGATGAATTT 59.187 47.619 0.00 0.00 30.61 1.82
3015 3480 2.096496 GCTGACCGTGATGAATTTCTGG 59.904 50.000 0.00 0.00 0.00 3.86
3111 3576 3.267860 GCAGAAGCCGCTGGATCG 61.268 66.667 0.00 0.00 36.41 3.69
3141 3606 1.260561 GAATCGTGCCGCGTGATAATT 59.739 47.619 4.92 0.00 42.13 1.40
3183 3648 0.389948 CCTGGCGTAGTGGTTCAGTC 60.390 60.000 0.00 0.00 0.00 3.51
3184 3649 0.317160 CTGGCGTAGTGGTTCAGTCA 59.683 55.000 0.00 0.00 0.00 3.41
3185 3650 0.317160 TGGCGTAGTGGTTCAGTCAG 59.683 55.000 0.00 0.00 0.00 3.51
3186 3651 0.317479 GGCGTAGTGGTTCAGTCAGT 59.683 55.000 0.00 0.00 0.00 3.41
3187 3652 1.419374 GCGTAGTGGTTCAGTCAGTG 58.581 55.000 0.00 0.00 0.00 3.66
3188 3653 1.935300 GCGTAGTGGTTCAGTCAGTGG 60.935 57.143 0.00 0.00 0.00 4.00
3190 3655 1.070134 GTAGTGGTTCAGTCAGTGGCA 59.930 52.381 0.00 0.00 0.00 4.92
3191 3656 0.179045 AGTGGTTCAGTCAGTGGCAC 60.179 55.000 10.29 10.29 0.00 5.01
3194 3659 1.961277 GTTCAGTCAGTGGCACCCG 60.961 63.158 15.27 6.13 0.00 5.28
3233 3698 7.582667 ACTGCAGAGTATGTGTATGTATGTA 57.417 36.000 23.35 0.00 0.00 2.29
3293 3759 0.320247 CCTTTGACAGTCTGAGCGCT 60.320 55.000 11.27 11.27 0.00 5.92
3329 3803 2.483714 CCCATCGACCTAGTTCCATGTG 60.484 54.545 0.00 0.00 0.00 3.21
3334 3808 3.192844 TCGACCTAGTTCCATGTGTTCTC 59.807 47.826 0.00 0.00 0.00 2.87
3336 3810 4.398358 CGACCTAGTTCCATGTGTTCTCTA 59.602 45.833 0.00 0.00 0.00 2.43
3337 3811 5.105877 CGACCTAGTTCCATGTGTTCTCTAA 60.106 44.000 0.00 0.00 0.00 2.10
3338 3812 6.571731 CGACCTAGTTCCATGTGTTCTCTAAA 60.572 42.308 0.00 0.00 0.00 1.85
3339 3813 6.465084 ACCTAGTTCCATGTGTTCTCTAAAC 58.535 40.000 0.00 0.00 0.00 2.01
3340 3814 5.577164 CCTAGTTCCATGTGTTCTCTAAACG 59.423 44.000 0.00 0.00 0.00 3.60
3341 3815 5.209818 AGTTCCATGTGTTCTCTAAACGA 57.790 39.130 0.00 0.00 0.00 3.85
3343 3817 5.869888 AGTTCCATGTGTTCTCTAAACGATC 59.130 40.000 0.00 0.00 0.00 3.69
3352 3884 8.141909 TGTGTTCTCTAAACGATCCCTTATATG 58.858 37.037 0.00 0.00 0.00 1.78
3356 3888 5.790593 TCTAAACGATCCCTTATATGGTGC 58.209 41.667 4.10 0.00 0.00 5.01
3361 3893 5.794894 ACGATCCCTTATATGGTGCTTTAG 58.205 41.667 4.10 0.00 0.00 1.85
3364 3896 5.825593 TCCCTTATATGGTGCTTTAGAGG 57.174 43.478 4.10 0.00 0.00 3.69
3365 3897 5.473273 TCCCTTATATGGTGCTTTAGAGGA 58.527 41.667 4.10 0.00 0.00 3.71
3367 3899 5.308237 CCCTTATATGGTGCTTTAGAGGAGT 59.692 44.000 4.10 0.00 0.00 3.85
3369 3901 6.042093 CCTTATATGGTGCTTTAGAGGAGTGA 59.958 42.308 0.00 0.00 0.00 3.41
3373 3905 4.985538 TGGTGCTTTAGAGGAGTGAAAAT 58.014 39.130 0.00 0.00 0.00 1.82
3374 3906 5.385198 TGGTGCTTTAGAGGAGTGAAAATT 58.615 37.500 0.00 0.00 0.00 1.82
3376 3908 7.175104 TGGTGCTTTAGAGGAGTGAAAATTAT 58.825 34.615 0.00 0.00 0.00 1.28
3377 3909 7.121168 TGGTGCTTTAGAGGAGTGAAAATTATG 59.879 37.037 0.00 0.00 0.00 1.90
3378 3910 7.121315 GGTGCTTTAGAGGAGTGAAAATTATGT 59.879 37.037 0.00 0.00 0.00 2.29
3380 3912 9.077885 TGCTTTAGAGGAGTGAAAATTATGTTT 57.922 29.630 0.00 0.00 0.00 2.83
3386 3918 8.797438 AGAGGAGTGAAAATTATGTTTTTCTCC 58.203 33.333 20.12 20.12 43.09 3.71
3387 3919 8.712228 AGGAGTGAAAATTATGTTTTTCTCCT 57.288 30.769 22.09 22.09 43.09 3.69
3388 3920 8.797438 AGGAGTGAAAATTATGTTTTTCTCCTC 58.203 33.333 22.09 19.25 42.33 3.71
3389 3921 8.797438 GGAGTGAAAATTATGTTTTTCTCCTCT 58.203 33.333 20.25 12.80 43.09 3.69
3394 3926 9.574458 GAAAATTATGTTTTTCTCCTCTAAGCC 57.426 33.333 7.37 0.00 40.71 4.35
3395 3927 8.650143 AAATTATGTTTTTCTCCTCTAAGCCA 57.350 30.769 0.00 0.00 0.00 4.75
3404 3936 3.961408 TCTCCTCTAAGCCACATCTAACC 59.039 47.826 0.00 0.00 0.00 2.85
3410 3942 1.496060 AGCCACATCTAACCGATCCA 58.504 50.000 0.00 0.00 0.00 3.41
3411 3943 1.139058 AGCCACATCTAACCGATCCAC 59.861 52.381 0.00 0.00 0.00 4.02
3412 3944 1.134521 GCCACATCTAACCGATCCACA 60.135 52.381 0.00 0.00 0.00 4.17
3413 3945 2.826428 CCACATCTAACCGATCCACAG 58.174 52.381 0.00 0.00 0.00 3.66
3432 3965 8.698973 TCCACAGAAGATTTAGAGGAGTATAG 57.301 38.462 0.00 0.00 0.00 1.31
3454 3987 2.631418 TTTACTTCAGACGCCTCTCG 57.369 50.000 0.00 0.00 45.38 4.04
3459 3992 0.679960 TTCAGACGCCTCTCGATCCA 60.680 55.000 0.00 0.00 41.67 3.41
3462 3995 1.198867 CAGACGCCTCTCGATCCATAG 59.801 57.143 0.00 0.00 41.67 2.23
3510 7276 1.276421 TCTCGCCTTAGAGCAAAGCTT 59.724 47.619 0.00 0.00 39.88 3.74
3523 7304 2.124122 CAAAGCTTTACCGGTTGTTGC 58.876 47.619 15.04 12.90 0.00 4.17
3530 7311 0.896923 TACCGGTTGTTGCGGTATCT 59.103 50.000 15.04 0.00 37.24 1.98
3531 7312 0.672401 ACCGGTTGTTGCGGTATCTG 60.672 55.000 0.00 0.00 33.87 2.90
3532 7313 0.672401 CCGGTTGTTGCGGTATCTGT 60.672 55.000 0.00 0.00 0.00 3.41
3540 7321 2.363788 TGCGGTATCTGTTGAGTCAC 57.636 50.000 0.00 0.00 0.00 3.67
3562 7343 8.436200 GTCACTGAGACTCAACAATAACATTAC 58.564 37.037 6.61 0.00 44.09 1.89
3565 7346 7.604164 ACTGAGACTCAACAATAACATTACCAG 59.396 37.037 6.61 0.00 0.00 4.00
3567 7348 6.180472 AGACTCAACAATAACATTACCAGGG 58.820 40.000 0.00 0.00 0.00 4.45
3568 7349 6.012858 AGACTCAACAATAACATTACCAGGGA 60.013 38.462 0.00 0.00 0.00 4.20
3571 7352 7.993183 ACTCAACAATAACATTACCAGGGATAG 59.007 37.037 0.00 0.00 0.00 2.08
3587 7368 7.037873 ACCAGGGATAGTAAAACTAACATCACA 60.038 37.037 0.00 0.00 33.89 3.58
3610 7391 8.922676 CACATATGTATAGGAAATGGTTACGTC 58.077 37.037 8.32 0.00 0.00 4.34
3617 7398 3.263425 AGGAAATGGTTACGTCATGAGGT 59.737 43.478 23.28 23.28 0.00 3.85
3639 7420 2.460918 GCAGCAAGCATCTAAGCAATG 58.539 47.619 0.00 0.00 44.79 2.82
3645 7426 4.096984 GCAAGCATCTAAGCAATGTAACCT 59.903 41.667 0.00 0.00 36.85 3.50
3653 7434 9.035607 CATCTAAGCAATGTAACCTAACTAGTG 57.964 37.037 0.00 0.00 0.00 2.74
3654 7435 8.130671 TCTAAGCAATGTAACCTAACTAGTGT 57.869 34.615 0.00 0.00 0.00 3.55
3659 7440 7.769044 AGCAATGTAACCTAACTAGTGTTATGG 59.231 37.037 0.00 0.00 37.92 2.74
3677 7458 9.968870 GTGTTATGGGTACTAGAAGAAGATAAG 57.031 37.037 0.00 0.00 0.00 1.73
3694 7480 9.661954 AGAAGATAAGATAATCCTACACCAAGA 57.338 33.333 0.00 0.00 0.00 3.02
3710 7496 3.081804 CCAAGAGGGTCGCAATTAGTTT 58.918 45.455 0.00 0.00 0.00 2.66
3716 7502 6.357367 AGAGGGTCGCAATTAGTTTATCAAT 58.643 36.000 0.00 0.00 0.00 2.57
3721 7507 9.048446 GGGTCGCAATTAGTTTATCAATAAGTA 57.952 33.333 0.00 0.00 0.00 2.24
3732 7518 9.886132 AGTTTATCAATAAGTAATCCTGAACGT 57.114 29.630 0.00 0.00 0.00 3.99
3740 7526 8.937207 ATAAGTAATCCTGAACGTCTACCTAT 57.063 34.615 0.00 0.00 0.00 2.57
3741 7527 6.636562 AGTAATCCTGAACGTCTACCTATG 57.363 41.667 0.00 0.00 0.00 2.23
3747 7533 5.587844 TCCTGAACGTCTACCTATGAGTTAC 59.412 44.000 0.00 0.00 0.00 2.50
3750 7536 5.587844 TGAACGTCTACCTATGAGTTACTCC 59.412 44.000 10.10 0.00 0.00 3.85
3754 7540 7.516452 ACGTCTACCTATGAGTTACTCCTAAT 58.484 38.462 10.10 0.00 0.00 1.73
3756 7542 7.879160 CGTCTACCTATGAGTTACTCCTAATCT 59.121 40.741 10.10 0.00 0.00 2.40
3759 7545 7.826918 ACCTATGAGTTACTCCTAATCTCAC 57.173 40.000 10.10 0.00 37.85 3.51
3779 7567 1.065401 CCGTGTTCTTCTTGCTTGCAA 59.935 47.619 7.83 7.83 0.00 4.08
3782 7570 2.860136 GTGTTCTTCTTGCTTGCAAACC 59.140 45.455 9.39 0.00 0.00 3.27
3788 7576 1.136695 TCTTGCTTGCAAACCCACAAG 59.863 47.619 9.39 9.55 44.88 3.16
3794 7582 3.248363 GCTTGCAAACCCACAAGAAAATC 59.752 43.478 0.00 0.00 44.89 2.17
3795 7583 4.440880 CTTGCAAACCCACAAGAAAATCA 58.559 39.130 0.00 0.00 44.89 2.57
3796 7584 3.791245 TGCAAACCCACAAGAAAATCAC 58.209 40.909 0.00 0.00 0.00 3.06
3797 7585 3.196469 TGCAAACCCACAAGAAAATCACA 59.804 39.130 0.00 0.00 0.00 3.58
3798 7586 4.141756 TGCAAACCCACAAGAAAATCACAT 60.142 37.500 0.00 0.00 0.00 3.21
3801 7589 3.165071 ACCCACAAGAAAATCACATCCC 58.835 45.455 0.00 0.00 0.00 3.85
3802 7590 2.164219 CCCACAAGAAAATCACATCCCG 59.836 50.000 0.00 0.00 0.00 5.14
3803 7591 2.819608 CCACAAGAAAATCACATCCCGT 59.180 45.455 0.00 0.00 0.00 5.28
3819 7607 1.732917 CGTGGAGGTGCTGCAAAAA 59.267 52.632 2.77 0.00 32.80 1.94
3820 7608 0.318107 CGTGGAGGTGCTGCAAAAAG 60.318 55.000 2.77 0.00 32.80 2.27
3834 7622 2.224042 GCAAAAAGCAGCAAAGGTAGGT 60.224 45.455 0.00 0.00 44.79 3.08
3836 7624 2.656947 AAAGCAGCAAAGGTAGGTGA 57.343 45.000 0.00 0.00 36.64 4.02
3841 7629 3.897505 AGCAGCAAAGGTAGGTGATTTTT 59.102 39.130 0.00 0.00 36.64 1.94
3873 7661 2.443887 AAATTGACACCACTGCATGC 57.556 45.000 11.82 11.82 0.00 4.06
3902 7690 4.471904 TCATCTGTAGGAGCATCGTTTT 57.528 40.909 0.00 0.00 33.79 2.43
3903 7691 4.183865 TCATCTGTAGGAGCATCGTTTTG 58.816 43.478 0.00 0.00 33.79 2.44
3904 7692 2.972625 TCTGTAGGAGCATCGTTTTGG 58.027 47.619 0.00 0.00 33.79 3.28
3905 7693 2.009774 CTGTAGGAGCATCGTTTTGGG 58.990 52.381 0.00 0.00 33.79 4.12
3906 7694 1.626321 TGTAGGAGCATCGTTTTGGGA 59.374 47.619 0.00 0.00 33.79 4.37
3907 7695 2.007608 GTAGGAGCATCGTTTTGGGAC 58.992 52.381 0.00 0.00 33.79 4.46
3908 7696 0.322546 AGGAGCATCGTTTTGGGACC 60.323 55.000 0.00 0.00 34.37 4.46
3909 7697 0.608035 GGAGCATCGTTTTGGGACCA 60.608 55.000 0.00 0.00 34.37 4.02
3910 7698 1.243902 GAGCATCGTTTTGGGACCAA 58.756 50.000 0.00 0.00 0.00 3.67
3911 7699 1.611491 GAGCATCGTTTTGGGACCAAA 59.389 47.619 12.27 12.27 43.23 3.28
3912 7700 1.339929 AGCATCGTTTTGGGACCAAAC 59.660 47.619 15.64 10.21 44.39 2.93
3913 7701 1.339929 GCATCGTTTTGGGACCAAACT 59.660 47.619 15.64 0.00 44.39 2.66
3914 7702 2.862140 GCATCGTTTTGGGACCAAACTG 60.862 50.000 15.64 11.14 44.39 3.16
3915 7703 0.741915 TCGTTTTGGGACCAAACTGC 59.258 50.000 15.64 8.59 44.39 4.40
3916 7704 0.249280 CGTTTTGGGACCAAACTGCC 60.249 55.000 15.64 4.44 44.39 4.85
3917 7705 1.119684 GTTTTGGGACCAAACTGCCT 58.880 50.000 15.64 0.00 44.39 4.75
3918 7706 1.484653 GTTTTGGGACCAAACTGCCTT 59.515 47.619 15.64 0.00 44.39 4.35
3919 7707 2.696187 GTTTTGGGACCAAACTGCCTTA 59.304 45.455 15.64 0.00 44.39 2.69
3920 7708 2.757894 TTGGGACCAAACTGCCTTAA 57.242 45.000 0.32 0.00 32.44 1.85
3921 7709 2.757894 TGGGACCAAACTGCCTTAAA 57.242 45.000 0.00 0.00 0.00 1.52
3922 7710 3.033659 TGGGACCAAACTGCCTTAAAA 57.966 42.857 0.00 0.00 0.00 1.52
3923 7711 3.375699 TGGGACCAAACTGCCTTAAAAA 58.624 40.909 0.00 0.00 0.00 1.94
3924 7712 3.386402 TGGGACCAAACTGCCTTAAAAAG 59.614 43.478 0.00 0.00 0.00 2.27
3925 7713 3.390135 GGACCAAACTGCCTTAAAAAGC 58.610 45.455 0.00 0.00 0.00 3.51
3926 7714 3.181470 GGACCAAACTGCCTTAAAAAGCA 60.181 43.478 0.00 0.00 37.46 3.91
3927 7715 4.438148 GACCAAACTGCCTTAAAAAGCAA 58.562 39.130 0.00 0.00 38.82 3.91
3928 7716 5.034852 ACCAAACTGCCTTAAAAAGCAAT 57.965 34.783 0.00 0.00 38.82 3.56
3929 7717 6.168270 ACCAAACTGCCTTAAAAAGCAATA 57.832 33.333 0.00 0.00 38.82 1.90
3930 7718 6.768483 ACCAAACTGCCTTAAAAAGCAATAT 58.232 32.000 0.00 0.00 38.82 1.28
3931 7719 7.223584 ACCAAACTGCCTTAAAAAGCAATATT 58.776 30.769 0.00 0.00 38.82 1.28
3932 7720 7.719193 ACCAAACTGCCTTAAAAAGCAATATTT 59.281 29.630 0.00 0.00 38.82 1.40
3933 7721 8.567104 CCAAACTGCCTTAAAAAGCAATATTTT 58.433 29.630 0.00 0.00 38.82 1.82
3937 7725 9.639601 ACTGCCTTAAAAAGCAATATTTTAGAC 57.360 29.630 0.00 0.00 38.82 2.59
3938 7726 9.638239 CTGCCTTAAAAAGCAATATTTTAGACA 57.362 29.630 0.00 0.00 38.82 3.41
3939 7727 9.418045 TGCCTTAAAAAGCAATATTTTAGACAC 57.582 29.630 0.00 0.00 35.69 3.67
3940 7728 9.418045 GCCTTAAAAAGCAATATTTTAGACACA 57.582 29.630 0.00 0.00 34.67 3.72
3947 7735 9.762933 AAAGCAATATTTTAGACACAACAATGT 57.237 25.926 0.00 0.00 41.61 2.71
3948 7736 9.762933 AAGCAATATTTTAGACACAACAATGTT 57.237 25.926 0.00 0.00 37.82 2.71
3949 7737 9.762933 AGCAATATTTTAGACACAACAATGTTT 57.237 25.926 0.00 0.00 37.82 2.83
3957 7745 9.781834 TTTAGACACAACAATGTTTTTACTCTG 57.218 29.630 0.00 0.00 37.82 3.35
3958 7746 7.391148 AGACACAACAATGTTTTTACTCTGT 57.609 32.000 0.00 0.00 37.82 3.41
3959 7747 7.826690 AGACACAACAATGTTTTTACTCTGTT 58.173 30.769 0.00 0.00 37.82 3.16
3960 7748 7.754924 AGACACAACAATGTTTTTACTCTGTTG 59.245 33.333 10.34 10.34 45.69 3.33
3961 7749 7.598278 ACACAACAATGTTTTTACTCTGTTGA 58.402 30.769 17.02 0.00 43.95 3.18
3962 7750 8.085296 ACACAACAATGTTTTTACTCTGTTGAA 58.915 29.630 17.02 0.00 43.95 2.69
3963 7751 8.586273 CACAACAATGTTTTTACTCTGTTGAAG 58.414 33.333 17.02 7.38 43.95 3.02
3964 7752 8.519526 ACAACAATGTTTTTACTCTGTTGAAGA 58.480 29.630 17.02 0.00 43.95 2.87
3965 7753 9.520204 CAACAATGTTTTTACTCTGTTGAAGAT 57.480 29.630 6.87 0.00 43.95 2.40
3966 7754 9.520204 AACAATGTTTTTACTCTGTTGAAGATG 57.480 29.630 0.00 0.00 33.29 2.90
3967 7755 7.649306 ACAATGTTTTTACTCTGTTGAAGATGC 59.351 33.333 0.00 0.00 33.29 3.91
3968 7756 6.942532 TGTTTTTACTCTGTTGAAGATGCT 57.057 33.333 0.00 0.00 33.29 3.79
3969 7757 6.959361 TGTTTTTACTCTGTTGAAGATGCTC 58.041 36.000 0.00 0.00 33.29 4.26
3970 7758 6.767902 TGTTTTTACTCTGTTGAAGATGCTCT 59.232 34.615 0.00 0.00 33.29 4.09
3971 7759 7.931407 TGTTTTTACTCTGTTGAAGATGCTCTA 59.069 33.333 0.00 0.00 33.29 2.43
3972 7760 8.774586 GTTTTTACTCTGTTGAAGATGCTCTAA 58.225 33.333 0.00 0.00 33.29 2.10
3973 7761 7.891183 TTTACTCTGTTGAAGATGCTCTAAC 57.109 36.000 0.00 0.00 33.29 2.34
3974 7762 4.489810 ACTCTGTTGAAGATGCTCTAACG 58.510 43.478 0.00 0.00 33.29 3.18
3975 7763 4.218635 ACTCTGTTGAAGATGCTCTAACGA 59.781 41.667 0.00 0.00 33.29 3.85
3976 7764 5.105554 ACTCTGTTGAAGATGCTCTAACGAT 60.106 40.000 0.00 0.00 33.29 3.73
3977 7765 5.105063 TCTGTTGAAGATGCTCTAACGATG 58.895 41.667 0.00 0.00 0.00 3.84
3978 7766 3.618594 TGTTGAAGATGCTCTAACGATGC 59.381 43.478 0.00 0.00 0.00 3.91
3979 7767 3.808466 TGAAGATGCTCTAACGATGCT 57.192 42.857 0.00 0.00 0.00 3.79
3980 7768 4.128925 TGAAGATGCTCTAACGATGCTT 57.871 40.909 0.00 0.00 0.00 3.91
3981 7769 5.262588 TGAAGATGCTCTAACGATGCTTA 57.737 39.130 0.00 0.00 0.00 3.09
3982 7770 5.660460 TGAAGATGCTCTAACGATGCTTAA 58.340 37.500 0.00 0.00 0.00 1.85
3983 7771 6.283694 TGAAGATGCTCTAACGATGCTTAAT 58.716 36.000 0.00 0.00 0.00 1.40
3984 7772 7.433680 TGAAGATGCTCTAACGATGCTTAATA 58.566 34.615 0.00 0.00 0.00 0.98
3985 7773 7.382488 TGAAGATGCTCTAACGATGCTTAATAC 59.618 37.037 0.00 0.00 0.00 1.89
3986 7774 6.987386 AGATGCTCTAACGATGCTTAATACT 58.013 36.000 0.00 0.00 0.00 2.12
3987 7775 8.112016 AGATGCTCTAACGATGCTTAATACTA 57.888 34.615 0.00 0.00 0.00 1.82
3988 7776 8.577296 AGATGCTCTAACGATGCTTAATACTAA 58.423 33.333 0.00 0.00 0.00 2.24
3989 7777 7.925703 TGCTCTAACGATGCTTAATACTAAC 57.074 36.000 0.00 0.00 0.00 2.34
3990 7778 7.485810 TGCTCTAACGATGCTTAATACTAACA 58.514 34.615 0.00 0.00 0.00 2.41
3991 7779 7.648112 TGCTCTAACGATGCTTAATACTAACAG 59.352 37.037 0.00 0.00 0.00 3.16
3992 7780 7.648510 GCTCTAACGATGCTTAATACTAACAGT 59.351 37.037 0.00 0.00 0.00 3.55
3993 7781 9.517609 CTCTAACGATGCTTAATACTAACAGTT 57.482 33.333 0.00 0.00 0.00 3.16
3997 7785 9.595823 AACGATGCTTAATACTAACAGTTATGT 57.404 29.630 0.00 0.00 43.15 2.29
4013 7801 9.884636 AACAGTTATGTTCAATATGTACTAGCA 57.115 29.630 0.00 0.00 46.90 3.49
4020 7808 9.955102 ATGTTCAATATGTACTAGCATCATCAT 57.045 29.630 0.00 0.00 0.00 2.45
4023 7811 9.591792 TTCAATATGTACTAGCATCATCATAGC 57.408 33.333 0.00 0.00 0.00 2.97
4024 7812 8.752187 TCAATATGTACTAGCATCATCATAGCA 58.248 33.333 0.00 0.00 0.00 3.49
4025 7813 9.543783 CAATATGTACTAGCATCATCATAGCAT 57.456 33.333 0.00 0.00 0.00 3.79
4028 7816 8.939201 ATGTACTAGCATCATCATAGCATAAC 57.061 34.615 0.00 0.00 0.00 1.89
4029 7817 7.895759 TGTACTAGCATCATCATAGCATAACA 58.104 34.615 0.00 0.00 0.00 2.41
4030 7818 8.367156 TGTACTAGCATCATCATAGCATAACAA 58.633 33.333 0.00 0.00 0.00 2.83
4031 7819 9.208022 GTACTAGCATCATCATAGCATAACAAA 57.792 33.333 0.00 0.00 0.00 2.83
4032 7820 8.859236 ACTAGCATCATCATAGCATAACAAAT 57.141 30.769 0.00 0.00 0.00 2.32
4033 7821 9.293404 ACTAGCATCATCATAGCATAACAAATT 57.707 29.630 0.00 0.00 0.00 1.82
4039 7827 9.918630 ATCATCATAGCATAACAAATTAAAGCC 57.081 29.630 0.00 0.00 0.00 4.35
4040 7828 8.075574 TCATCATAGCATAACAAATTAAAGCCG 58.924 33.333 0.00 0.00 0.00 5.52
4041 7829 6.734137 TCATAGCATAACAAATTAAAGCCGG 58.266 36.000 0.00 0.00 0.00 6.13
4042 7830 6.320164 TCATAGCATAACAAATTAAAGCCGGT 59.680 34.615 1.90 0.00 0.00 5.28
4043 7831 4.743493 AGCATAACAAATTAAAGCCGGTG 58.257 39.130 1.90 0.00 0.00 4.94
4044 7832 3.862845 GCATAACAAATTAAAGCCGGTGG 59.137 43.478 1.90 0.00 0.00 4.61
4045 7833 4.619628 GCATAACAAATTAAAGCCGGTGGT 60.620 41.667 1.90 0.00 0.00 4.16
4046 7834 5.474825 CATAACAAATTAAAGCCGGTGGTT 58.525 37.500 1.90 0.00 0.00 3.67
4047 7835 4.409718 AACAAATTAAAGCCGGTGGTTT 57.590 36.364 1.90 3.48 44.03 3.27
4048 7836 3.723260 ACAAATTAAAGCCGGTGGTTTG 58.277 40.909 1.90 8.99 41.94 2.93
4049 7837 3.385111 ACAAATTAAAGCCGGTGGTTTGA 59.615 39.130 1.90 0.00 41.94 2.69
4050 7838 4.141914 ACAAATTAAAGCCGGTGGTTTGAA 60.142 37.500 1.90 0.00 41.94 2.69
4051 7839 4.674281 AATTAAAGCCGGTGGTTTGAAA 57.326 36.364 1.90 0.00 41.94 2.69
4052 7840 3.719173 TTAAAGCCGGTGGTTTGAAAG 57.281 42.857 1.90 0.00 41.94 2.62
4053 7841 1.480789 AAAGCCGGTGGTTTGAAAGT 58.519 45.000 1.90 0.00 40.50 2.66
4054 7842 1.480789 AAGCCGGTGGTTTGAAAGTT 58.519 45.000 1.90 0.00 0.00 2.66
4055 7843 2.351706 AGCCGGTGGTTTGAAAGTTA 57.648 45.000 1.90 0.00 0.00 2.24
4056 7844 2.657143 AGCCGGTGGTTTGAAAGTTAA 58.343 42.857 1.90 0.00 0.00 2.01
4057 7845 3.227614 AGCCGGTGGTTTGAAAGTTAAT 58.772 40.909 1.90 0.00 0.00 1.40
4058 7846 4.400120 AGCCGGTGGTTTGAAAGTTAATA 58.600 39.130 1.90 0.00 0.00 0.98
4059 7847 4.216902 AGCCGGTGGTTTGAAAGTTAATAC 59.783 41.667 1.90 0.00 0.00 1.89
4060 7848 4.023021 GCCGGTGGTTTGAAAGTTAATACA 60.023 41.667 1.90 0.00 0.00 2.29
4061 7849 5.454520 CCGGTGGTTTGAAAGTTAATACAC 58.545 41.667 0.00 0.00 0.00 2.90
4062 7850 5.008811 CCGGTGGTTTGAAAGTTAATACACA 59.991 40.000 0.00 0.00 0.00 3.72
4063 7851 6.140110 CGGTGGTTTGAAAGTTAATACACAG 58.860 40.000 0.00 0.00 0.00 3.66
4064 7852 6.238538 CGGTGGTTTGAAAGTTAATACACAGT 60.239 38.462 0.00 0.00 0.00 3.55
4065 7853 7.041916 CGGTGGTTTGAAAGTTAATACACAGTA 60.042 37.037 0.00 0.00 0.00 2.74
4066 7854 8.789762 GGTGGTTTGAAAGTTAATACACAGTAT 58.210 33.333 0.00 0.00 0.00 2.12
4076 7864 9.747898 AAGTTAATACACAGTATTTTCATGGGA 57.252 29.630 7.61 0.00 0.00 4.37
4077 7865 9.920946 AGTTAATACACAGTATTTTCATGGGAT 57.079 29.630 7.61 0.00 0.00 3.85
4083 7871 7.836842 ACACAGTATTTTCATGGGATTTTACC 58.163 34.615 0.00 0.00 0.00 2.85
4084 7872 6.972328 CACAGTATTTTCATGGGATTTTACCG 59.028 38.462 0.00 0.00 0.00 4.02
4085 7873 6.887545 ACAGTATTTTCATGGGATTTTACCGA 59.112 34.615 0.00 0.00 0.00 4.69
4086 7874 7.067008 ACAGTATTTTCATGGGATTTTACCGAG 59.933 37.037 0.00 0.00 0.00 4.63
4087 7875 7.067008 CAGTATTTTCATGGGATTTTACCGAGT 59.933 37.037 0.00 0.00 0.00 4.18
4088 7876 5.890424 TTTTCATGGGATTTTACCGAGTC 57.110 39.130 0.00 0.00 0.00 3.36
4089 7877 4.561500 TTCATGGGATTTTACCGAGTCA 57.438 40.909 0.00 0.00 0.00 3.41
4090 7878 4.771114 TCATGGGATTTTACCGAGTCAT 57.229 40.909 0.00 0.00 0.00 3.06
4091 7879 5.110814 TCATGGGATTTTACCGAGTCATT 57.889 39.130 0.00 0.00 0.00 2.57
4092 7880 5.123227 TCATGGGATTTTACCGAGTCATTC 58.877 41.667 0.00 0.00 0.00 2.67
4110 7898 2.920912 GGTGACCACCCGGAGTCA 60.921 66.667 15.34 15.34 45.68 3.41
4111 7899 2.513259 GGTGACCACCCGGAGTCAA 61.513 63.158 19.37 5.72 44.19 3.18
4112 7900 1.301479 GTGACCACCCGGAGTCAAC 60.301 63.158 19.37 12.11 44.19 3.18
4113 7901 1.762858 TGACCACCCGGAGTCAACA 60.763 57.895 16.53 2.10 39.96 3.33
4114 7902 1.338890 TGACCACCCGGAGTCAACAA 61.339 55.000 16.53 0.00 39.96 2.83
4115 7903 0.179040 GACCACCCGGAGTCAACAAA 60.179 55.000 0.73 0.00 35.59 2.83
4116 7904 0.476771 ACCACCCGGAGTCAACAAAT 59.523 50.000 0.73 0.00 35.59 2.32
4117 7905 1.165270 CCACCCGGAGTCAACAAATC 58.835 55.000 0.73 0.00 0.00 2.17
4118 7906 1.271379 CCACCCGGAGTCAACAAATCT 60.271 52.381 0.73 0.00 0.00 2.40
4119 7907 1.806542 CACCCGGAGTCAACAAATCTG 59.193 52.381 0.73 0.00 0.00 2.90
4120 7908 1.420138 ACCCGGAGTCAACAAATCTGT 59.580 47.619 0.73 0.00 37.39 3.41
4122 7910 2.884639 CCCGGAGTCAACAAATCTGTTT 59.115 45.455 0.73 0.00 43.45 2.83
4123 7911 3.317993 CCCGGAGTCAACAAATCTGTTTT 59.682 43.478 0.73 0.00 43.45 2.43
4124 7912 4.202111 CCCGGAGTCAACAAATCTGTTTTT 60.202 41.667 0.73 0.00 43.45 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.741985 CGTGGGAACATGCTGCGA 60.742 61.111 0.00 0.00 46.14 5.10
66 67 3.782244 CGGCTGTGCTCGCTTGTC 61.782 66.667 0.00 0.00 0.00 3.18
124 125 4.162690 GAGCGATCGGGGTTGGCT 62.163 66.667 18.30 2.64 36.51 4.75
155 156 1.986378 GTGATTGACAACTCGGTCGAG 59.014 52.381 17.50 17.50 46.91 4.04
160 161 1.787847 GCCGTGATTGACAACTCGG 59.212 57.895 18.55 18.55 43.13 4.63
191 193 2.513897 ATGCTAAGTTCGGCCGGC 60.514 61.111 27.83 21.18 0.00 6.13
291 293 2.704616 CGAGAGCGAGACGGAGAC 59.295 66.667 0.00 0.00 40.82 3.36
401 434 2.328099 GCTTCCTCACCTTGCACGG 61.328 63.158 7.87 7.87 0.00 4.94
420 457 2.202650 TTAAGCTACGCGCCCGAC 60.203 61.111 5.73 0.00 40.39 4.79
424 461 3.921722 GCCGTTAAGCTACGCGCC 61.922 66.667 5.73 0.00 40.10 6.53
592 635 1.011352 GAGTACGTCGACGCTAGCC 60.011 63.158 35.92 19.13 44.43 3.93
618 661 1.449070 GGGTCGCTTACTTTCCCGG 60.449 63.158 0.00 0.00 0.00 5.73
628 671 4.421479 CGCGTCAGAGGGTCGCTT 62.421 66.667 0.00 0.00 46.31 4.68
635 678 4.492160 TTAGGCGCGCGTCAGAGG 62.492 66.667 37.48 4.17 0.00 3.69
672 715 4.203076 CTTAGCCGTCCCGTCCCG 62.203 72.222 0.00 0.00 0.00 5.14
675 718 1.591863 GATGCTTAGCCGTCCCGTC 60.592 63.158 0.29 0.00 0.00 4.79
680 723 1.084370 ACTTGCGATGCTTAGCCGTC 61.084 55.000 0.29 0.00 0.00 4.79
684 727 1.278238 ACGTACTTGCGATGCTTAGC 58.722 50.000 0.00 0.00 35.59 3.09
697 740 4.388499 CAGCGGCCCCAACGTACT 62.388 66.667 0.00 0.00 0.00 2.73
725 779 3.426568 GTTGGCAGGACGCAGAGC 61.427 66.667 0.00 0.00 45.17 4.09
738 796 3.423154 GCTCGGCCGAGTTGTTGG 61.423 66.667 45.36 26.88 43.70 3.77
753 811 1.329171 CCTGTGGAGCTAGCTCTGCT 61.329 60.000 36.76 13.10 44.24 4.24
755 813 1.134848 GTTCCTGTGGAGCTAGCTCTG 60.135 57.143 36.76 24.85 42.38 3.35
756 814 1.190643 GTTCCTGTGGAGCTAGCTCT 58.809 55.000 36.76 10.62 42.38 4.09
757 815 0.898320 TGTTCCTGTGGAGCTAGCTC 59.102 55.000 32.65 32.65 42.04 4.09
842 900 4.434354 AGCGGCGTCTCCTCCTCT 62.434 66.667 9.37 0.00 0.00 3.69
861 919 1.226888 GTACGTAAGCGGGCAGGAG 60.227 63.158 0.00 0.00 43.45 3.69
876 934 0.391597 TGCTGGCGGCTATTAGGTAC 59.608 55.000 20.66 0.00 42.39 3.34
897 955 0.668706 GAGAGCGAGCAAGCAGAACA 60.669 55.000 6.21 0.00 40.15 3.18
898 956 0.668706 TGAGAGCGAGCAAGCAGAAC 60.669 55.000 6.21 0.00 40.15 3.01
916 974 1.835483 GCGTATGGGCAGAAGCGATG 61.835 60.000 0.00 0.00 43.41 3.84
929 987 0.506080 GAGCAGATCAAGCGCGTATG 59.494 55.000 8.43 7.52 37.01 2.39
931 989 1.226974 GGAGCAGATCAAGCGCGTA 60.227 57.895 8.43 0.00 37.01 4.42
961 1026 4.680237 CAACCGAGGGAGCACGCA 62.680 66.667 0.36 0.00 0.00 5.24
1053 1167 0.874175 TTGGACGAAGCAGACACGTG 60.874 55.000 15.48 15.48 40.29 4.49
1069 1183 2.417933 CGAAGCTCAACAAGAGGATTGG 59.582 50.000 0.00 0.00 44.86 3.16
1070 1184 3.070018 ACGAAGCTCAACAAGAGGATTG 58.930 45.455 0.00 0.00 44.86 2.67
1076 1190 6.090898 GCTTAATTAGACGAAGCTCAACAAGA 59.909 38.462 3.18 0.00 41.89 3.02
1103 1244 2.671963 AAAAGAAGCGACCGGCCC 60.672 61.111 0.00 0.00 45.17 5.80
1109 1301 0.799393 GGCCTGAGAAAAGAAGCGAC 59.201 55.000 0.00 0.00 0.00 5.19
1119 1311 0.603707 CAAAGTGAGCGGCCTGAGAA 60.604 55.000 0.00 0.00 0.00 2.87
1121 1313 1.302033 ACAAAGTGAGCGGCCTGAG 60.302 57.895 0.00 0.00 0.00 3.35
1162 1357 3.490759 CAGCATGGCGTGGTCGTC 61.491 66.667 8.73 0.00 42.45 4.20
1199 1397 2.548920 CCTGGGTAGATCTTGGATTCGC 60.549 54.545 0.00 0.00 0.00 4.70
1201 1399 2.224646 GGCCTGGGTAGATCTTGGATTC 60.225 54.545 0.00 0.00 0.00 2.52
1206 1404 1.270518 CGATGGCCTGGGTAGATCTTG 60.271 57.143 3.32 0.00 0.00 3.02
1209 1407 1.674057 CCGATGGCCTGGGTAGATC 59.326 63.158 3.32 0.00 0.00 2.75
1316 1517 0.531974 AGCAGCGTCGTTCTTCCAAA 60.532 50.000 0.00 0.00 0.00 3.28
1318 1519 1.372997 GAGCAGCGTCGTTCTTCCA 60.373 57.895 0.00 0.00 0.00 3.53
1432 1692 1.613925 GGGGAGAACAGTTTTGCTTCC 59.386 52.381 0.00 0.00 0.00 3.46
1453 1713 1.588139 GATTCCAGCGTACCCGTCG 60.588 63.158 0.00 0.00 36.15 5.12
1500 1760 2.039084 GCATCGATATGACCCCCTTCTT 59.961 50.000 0.00 0.00 34.84 2.52
1527 1787 3.260483 GCTGATCGTCCTGCGCTG 61.260 66.667 9.73 8.47 41.07 5.18
1531 1791 0.390340 TCTTGTGCTGATCGTCCTGC 60.390 55.000 0.00 0.00 0.00 4.85
1551 1811 3.290710 AGGAGAAGATCACTCTCTCTGC 58.709 50.000 18.93 7.40 35.10 4.26
1567 1827 0.967887 CAGGCCAGTCGAAGAGGAGA 60.968 60.000 5.01 0.00 36.95 3.71
1570 1830 1.515020 CTCAGGCCAGTCGAAGAGG 59.485 63.158 5.01 0.00 36.95 3.69
1610 1870 1.245732 ACGTACCTCAGGTCTGTGTC 58.754 55.000 0.00 0.00 37.09 3.67
1612 1872 1.471684 GGTACGTACCTCAGGTCTGTG 59.528 57.143 32.93 0.00 43.10 3.66
1640 1900 9.404848 AGGCAAGAATTAAAGGGTAATTACTAC 57.595 33.333 15.05 8.78 0.00 2.73
1643 1903 8.528643 ACAAGGCAAGAATTAAAGGGTAATTAC 58.471 33.333 7.09 7.09 0.00 1.89
1683 1948 4.901814 AGTAACGCATACTGTACAGTACG 58.098 43.478 32.61 30.97 45.61 3.67
1718 1983 3.386726 TCAGACGAGGAAACAAGAAAGGA 59.613 43.478 0.00 0.00 0.00 3.36
1770 2035 6.463897 GGGTGATCAAAGTAATCGATCCCTAA 60.464 42.308 0.00 0.00 35.68 2.69
1777 2042 4.142026 ACATCGGGTGATCAAAGTAATCGA 60.142 41.667 0.00 0.12 30.49 3.59
1792 2057 2.121832 TGGAGGACCACATCGGGT 59.878 61.111 0.00 0.00 46.02 5.28
1803 2068 2.125147 CGGCGAGCAAATGGAGGA 60.125 61.111 0.00 0.00 0.00 3.71
1805 2070 2.125147 TCCGGCGAGCAAATGGAG 60.125 61.111 9.30 0.00 0.00 3.86
1808 2073 2.563086 GAACGTCCGGCGAGCAAATG 62.563 60.000 22.10 0.14 44.77 2.32
1849 2120 1.078426 GACGGATGGGGGTTGTCAG 60.078 63.158 0.00 0.00 0.00 3.51
1894 2223 7.752686 GGAAAACAATCAGCAAGATAAGAGTTC 59.247 37.037 0.00 0.00 35.39 3.01
1923 2252 5.867330 TGCATCATCCAACCTTCAAATTTT 58.133 33.333 0.00 0.00 0.00 1.82
1937 2266 4.276926 GGTTGTAAATCCTCTGCATCATCC 59.723 45.833 0.00 0.00 0.00 3.51
1966 2346 8.017946 GTCTTGTCAGAAATAATGAACCAAGAC 58.982 37.037 16.74 16.74 44.52 3.01
1993 2373 1.003233 GATGGGACGGAACCAAGAAGT 59.997 52.381 0.00 0.00 42.17 3.01
1997 2377 0.392998 CTGGATGGGACGGAACCAAG 60.393 60.000 0.00 0.00 42.17 3.61
1998 2378 1.682849 CTGGATGGGACGGAACCAA 59.317 57.895 0.00 0.00 42.17 3.67
1999 2379 2.297895 CCTGGATGGGACGGAACCA 61.298 63.158 0.00 0.00 43.22 3.67
2008 2388 3.513909 TTAGCATGATTCCTGGATGGG 57.486 47.619 0.00 0.00 36.20 4.00
2014 2394 7.307278 CGAAGAGAGAATTTAGCATGATTCCTG 60.307 40.741 0.00 0.00 33.72 3.86
2022 2406 4.414337 AGGCGAAGAGAGAATTTAGCAT 57.586 40.909 0.00 0.00 0.00 3.79
2055 2451 4.849810 TGTCCTTTCCTTTCTTCCAGGATA 59.150 41.667 0.00 0.00 40.31 2.59
2060 2456 2.846193 CGTGTCCTTTCCTTTCTTCCA 58.154 47.619 0.00 0.00 0.00 3.53
2077 2473 0.597637 AAGACGAGTTCAGTGGCGTG 60.598 55.000 0.00 0.00 37.07 5.34
2246 2642 1.633561 CTCTCGTCGTTGCACATGAT 58.366 50.000 0.00 0.00 0.00 2.45
2247 2643 1.008875 GCTCTCGTCGTTGCACATGA 61.009 55.000 0.00 0.00 0.00 3.07
2248 2644 1.284297 TGCTCTCGTCGTTGCACATG 61.284 55.000 0.00 0.00 0.00 3.21
2249 2645 0.390340 ATGCTCTCGTCGTTGCACAT 60.390 50.000 10.48 0.00 38.29 3.21
2250 2646 1.006220 ATGCTCTCGTCGTTGCACA 60.006 52.632 10.48 0.00 38.29 4.57
2251 2647 1.008875 TGATGCTCTCGTCGTTGCAC 61.009 55.000 10.48 6.93 38.29 4.57
2252 2648 0.108662 ATGATGCTCTCGTCGTTGCA 60.109 50.000 10.62 10.62 39.83 4.08
2253 2649 0.299895 CATGATGCTCTCGTCGTTGC 59.700 55.000 0.00 0.00 0.00 4.17
2254 2650 1.585668 GACATGATGCTCTCGTCGTTG 59.414 52.381 0.00 0.00 0.00 4.10
2255 2651 1.474478 AGACATGATGCTCTCGTCGTT 59.526 47.619 0.00 0.00 0.00 3.85
2256 2652 1.098869 AGACATGATGCTCTCGTCGT 58.901 50.000 0.00 0.00 0.00 4.34
2257 2653 2.115595 GAAGACATGATGCTCTCGTCG 58.884 52.381 0.00 0.00 0.00 5.12
2258 2654 2.100584 AGGAAGACATGATGCTCTCGTC 59.899 50.000 0.00 0.00 0.00 4.20
2259 2655 2.100584 GAGGAAGACATGATGCTCTCGT 59.899 50.000 0.00 0.00 31.98 4.18
2260 2656 2.545532 GGAGGAAGACATGATGCTCTCG 60.546 54.545 0.00 0.00 34.76 4.04
2261 2657 2.545532 CGGAGGAAGACATGATGCTCTC 60.546 54.545 0.00 0.77 34.76 3.20
2262 2658 1.411977 CGGAGGAAGACATGATGCTCT 59.588 52.381 0.00 0.00 34.76 4.09
2263 2659 1.863267 CGGAGGAAGACATGATGCTC 58.137 55.000 0.00 5.34 33.71 4.26
2264 2660 0.179062 GCGGAGGAAGACATGATGCT 60.179 55.000 0.00 0.00 0.00 3.79
2265 2661 0.179062 AGCGGAGGAAGACATGATGC 60.179 55.000 0.00 0.00 0.00 3.91
2266 2662 1.579698 CAGCGGAGGAAGACATGATG 58.420 55.000 0.00 0.00 0.00 3.07
2267 2663 0.179062 GCAGCGGAGGAAGACATGAT 60.179 55.000 0.00 0.00 0.00 2.45
2268 2664 1.219124 GCAGCGGAGGAAGACATGA 59.781 57.895 0.00 0.00 0.00 3.07
2269 2665 0.809241 GAGCAGCGGAGGAAGACATG 60.809 60.000 0.00 0.00 0.00 3.21
2270 2666 1.519719 GAGCAGCGGAGGAAGACAT 59.480 57.895 0.00 0.00 0.00 3.06
2271 2667 2.973899 GAGCAGCGGAGGAAGACA 59.026 61.111 0.00 0.00 0.00 3.41
2272 2668 2.202676 CGAGCAGCGGAGGAAGAC 60.203 66.667 0.00 0.00 36.03 3.01
2273 2669 4.135153 GCGAGCAGCGGAGGAAGA 62.135 66.667 1.23 0.00 41.29 2.87
2305 2701 2.518836 AAACGTACGCCGAGACGAGG 62.519 60.000 16.72 0.00 41.60 4.63
2392 2788 0.030908 GCGGAGGGAAGTACATCTCG 59.969 60.000 0.00 0.00 0.00 4.04
2509 2920 1.445095 CGAGCTCCTCCTCCCATTG 59.555 63.158 8.47 0.00 0.00 2.82
2512 2923 4.465446 CCCGAGCTCCTCCTCCCA 62.465 72.222 8.47 0.00 0.00 4.37
2545 2962 3.989698 AACAGACGATGGCCGAGCG 62.990 63.158 10.58 10.58 41.76 5.03
2551 2968 1.079405 TTCCGGAACAGACGATGGC 60.079 57.895 14.35 0.00 0.00 4.40
2554 2971 1.153823 CGCTTCCGGAACAGACGAT 60.154 57.895 14.35 0.00 0.00 3.73
2666 3103 5.565592 TCACATATTCACATGAACAAGGC 57.434 39.130 0.00 0.00 36.80 4.35
2699 3136 4.633126 GTCAGTACATGTACGTGGAGACTA 59.367 45.833 26.17 8.56 40.80 2.59
2705 3142 1.469703 TCGGTCAGTACATGTACGTGG 59.530 52.381 26.17 20.10 40.80 4.94
2709 3146 4.430137 TGAACTCGGTCAGTACATGTAC 57.570 45.455 25.51 25.51 32.30 2.90
2715 3152 4.557205 ACAAAGATGAACTCGGTCAGTAC 58.443 43.478 0.00 0.00 32.30 2.73
2739 3176 3.745458 CCAACTGCAAAACCGCATTTTAT 59.255 39.130 0.00 0.00 42.06 1.40
2740 3177 3.126831 CCAACTGCAAAACCGCATTTTA 58.873 40.909 0.00 0.00 42.06 1.52
2747 3184 0.591236 CACGTCCAACTGCAAAACCG 60.591 55.000 0.00 0.00 0.00 4.44
2763 3200 3.353836 CACGCCTTGGTTCCCACG 61.354 66.667 0.00 0.00 30.78 4.94
2823 3260 1.028868 GTTCCACTGCCTGATGCCTC 61.029 60.000 0.00 0.00 40.16 4.70
2826 3263 0.321919 TCTGTTCCACTGCCTGATGC 60.322 55.000 0.00 0.00 41.77 3.91
2834 3271 1.507141 GCCCACGTTCTGTTCCACTG 61.507 60.000 0.00 0.00 0.00 3.66
2838 3275 1.671379 GGAGCCCACGTTCTGTTCC 60.671 63.158 0.00 0.00 0.00 3.62
2853 3290 2.037136 CCTGTTTGCAGCCGAGGAG 61.037 63.158 0.00 0.00 41.26 3.69
2882 3319 3.909957 CATGCATGTCATGTCGTGG 57.090 52.632 18.91 0.00 45.79 4.94
2915 3367 6.126863 AGGATGGTGTTATCAGAAGACAAA 57.873 37.500 0.00 0.00 0.00 2.83
2916 3368 5.338381 GGAGGATGGTGTTATCAGAAGACAA 60.338 44.000 0.00 0.00 0.00 3.18
2930 3382 0.617413 AGCAACAGAGGAGGATGGTG 59.383 55.000 0.00 0.00 37.19 4.17
2955 3407 3.249189 AGAGGGCCAACGCTTCCA 61.249 61.111 6.18 0.00 39.58 3.53
2959 3411 3.570212 AACCAGAGGGCCAACGCT 61.570 61.111 6.18 0.00 42.74 5.07
2960 3412 3.365265 CAACCAGAGGGCCAACGC 61.365 66.667 6.18 0.00 37.90 4.84
2961 3413 2.672996 CCAACCAGAGGGCCAACG 60.673 66.667 6.18 0.00 37.90 4.10
2962 3414 1.603739 GACCAACCAGAGGGCCAAC 60.604 63.158 6.18 0.00 37.90 3.77
2983 3442 2.187946 GGTCAGCACCTGGATCGG 59.812 66.667 0.00 0.00 40.00 4.18
3004 3466 1.188863 GCCTGCCACCAGAAATTCAT 58.811 50.000 0.00 0.00 41.77 2.57
3005 3467 0.112995 AGCCTGCCACCAGAAATTCA 59.887 50.000 0.00 0.00 41.77 2.57
3006 3468 0.813821 GAGCCTGCCACCAGAAATTC 59.186 55.000 0.00 0.00 41.77 2.17
3007 3469 0.112995 TGAGCCTGCCACCAGAAATT 59.887 50.000 0.00 0.00 41.77 1.82
3008 3470 0.323178 CTGAGCCTGCCACCAGAAAT 60.323 55.000 0.00 0.00 41.77 2.17
3009 3471 1.073722 CTGAGCCTGCCACCAGAAA 59.926 57.895 0.00 0.00 41.77 2.52
3011 3473 4.025858 GCTGAGCCTGCCACCAGA 62.026 66.667 0.00 0.00 41.77 3.86
3015 3480 2.360852 ATGTGCTGAGCCTGCCAC 60.361 61.111 0.23 0.00 0.00 5.01
3111 3576 2.582498 CACGATTCGCCGTCCTCC 60.582 66.667 5.86 0.00 41.29 4.30
3155 3620 2.122989 TACGCCAGGAGATCCCCC 60.123 66.667 0.00 0.00 36.42 5.40
3183 3648 1.468520 CAGAATTAACGGGTGCCACTG 59.531 52.381 0.00 0.00 0.00 3.66
3184 3649 1.349688 TCAGAATTAACGGGTGCCACT 59.650 47.619 0.00 0.00 0.00 4.00
3185 3650 1.816074 TCAGAATTAACGGGTGCCAC 58.184 50.000 0.00 0.00 0.00 5.01
3186 3651 2.799126 ATCAGAATTAACGGGTGCCA 57.201 45.000 0.00 0.00 0.00 4.92
3187 3652 3.279434 AGAATCAGAATTAACGGGTGCC 58.721 45.455 0.00 0.00 0.00 5.01
3188 3653 5.006746 CAGTAGAATCAGAATTAACGGGTGC 59.993 44.000 0.00 0.00 0.00 5.01
3190 3655 5.116882 GCAGTAGAATCAGAATTAACGGGT 58.883 41.667 0.00 0.00 0.00 5.28
3191 3656 5.116180 TGCAGTAGAATCAGAATTAACGGG 58.884 41.667 0.00 0.00 0.00 5.28
3194 3659 9.757227 ATACTCTGCAGTAGAATCAGAATTAAC 57.243 33.333 14.67 0.00 38.56 2.01
3251 3717 3.984508 AGACTTCCATCATACGTACCG 57.015 47.619 0.00 0.00 0.00 4.02
3265 3731 4.021894 TCAGACTGTCAAAGGCTAGACTTC 60.022 45.833 12.34 0.00 45.35 3.01
3266 3732 3.898123 TCAGACTGTCAAAGGCTAGACTT 59.102 43.478 4.51 4.51 45.35 3.01
3293 3759 0.173935 ATGGGACGAATAACACGCGA 59.826 50.000 15.93 0.00 0.00 5.87
3329 3803 7.599245 CACCATATAAGGGATCGTTTAGAGAAC 59.401 40.741 0.00 0.00 0.00 3.01
3334 3808 5.794894 AGCACCATATAAGGGATCGTTTAG 58.205 41.667 0.00 0.00 0.00 1.85
3336 3810 4.706842 AGCACCATATAAGGGATCGTTT 57.293 40.909 0.00 0.00 0.00 3.60
3337 3811 4.706842 AAGCACCATATAAGGGATCGTT 57.293 40.909 0.00 0.00 0.00 3.85
3338 3812 4.706842 AAAGCACCATATAAGGGATCGT 57.293 40.909 0.00 0.00 0.00 3.73
3339 3813 6.037786 TCTAAAGCACCATATAAGGGATCG 57.962 41.667 0.00 0.00 0.00 3.69
3340 3814 6.213600 TCCTCTAAAGCACCATATAAGGGATC 59.786 42.308 0.00 0.00 0.00 3.36
3341 3815 6.091555 TCCTCTAAAGCACCATATAAGGGAT 58.908 40.000 0.00 0.00 0.00 3.85
3343 3817 5.308237 ACTCCTCTAAAGCACCATATAAGGG 59.692 44.000 0.00 0.00 0.00 3.95
3352 3884 5.966742 AATTTTCACTCCTCTAAAGCACC 57.033 39.130 0.00 0.00 0.00 5.01
3361 3893 8.797438 AGGAGAAAAACATAATTTTCACTCCTC 58.203 33.333 21.65 11.22 46.75 3.71
3369 3901 9.088987 TGGCTTAGAGGAGAAAAACATAATTTT 57.911 29.630 0.00 0.00 35.29 1.82
3373 3905 6.539173 TGTGGCTTAGAGGAGAAAAACATAA 58.461 36.000 0.00 0.00 0.00 1.90
3374 3906 6.121776 TGTGGCTTAGAGGAGAAAAACATA 57.878 37.500 0.00 0.00 0.00 2.29
3376 3908 4.431416 TGTGGCTTAGAGGAGAAAAACA 57.569 40.909 0.00 0.00 0.00 2.83
3377 3909 5.249420 AGATGTGGCTTAGAGGAGAAAAAC 58.751 41.667 0.00 0.00 0.00 2.43
3378 3910 5.505181 AGATGTGGCTTAGAGGAGAAAAA 57.495 39.130 0.00 0.00 0.00 1.94
3380 3912 5.104900 GGTTAGATGTGGCTTAGAGGAGAAA 60.105 44.000 0.00 0.00 0.00 2.52
3384 3916 2.693591 CGGTTAGATGTGGCTTAGAGGA 59.306 50.000 0.00 0.00 0.00 3.71
3385 3917 2.693591 TCGGTTAGATGTGGCTTAGAGG 59.306 50.000 0.00 0.00 0.00 3.69
3386 3918 4.551388 GATCGGTTAGATGTGGCTTAGAG 58.449 47.826 0.00 0.00 40.26 2.43
3387 3919 3.321111 GGATCGGTTAGATGTGGCTTAGA 59.679 47.826 0.00 0.00 40.26 2.10
3388 3920 3.069586 TGGATCGGTTAGATGTGGCTTAG 59.930 47.826 0.00 0.00 40.26 2.18
3389 3921 3.035363 TGGATCGGTTAGATGTGGCTTA 58.965 45.455 0.00 0.00 40.26 3.09
3390 3922 1.837439 TGGATCGGTTAGATGTGGCTT 59.163 47.619 0.00 0.00 40.26 4.35
3391 3923 1.139058 GTGGATCGGTTAGATGTGGCT 59.861 52.381 0.00 0.00 40.26 4.75
3392 3924 1.134521 TGTGGATCGGTTAGATGTGGC 60.135 52.381 0.00 0.00 40.26 5.01
3393 3925 2.430694 TCTGTGGATCGGTTAGATGTGG 59.569 50.000 0.00 0.00 40.26 4.17
3394 3926 3.801114 TCTGTGGATCGGTTAGATGTG 57.199 47.619 0.00 0.00 40.26 3.21
3395 3927 4.023980 TCTTCTGTGGATCGGTTAGATGT 58.976 43.478 0.00 0.00 40.26 3.06
3404 3936 5.068460 ACTCCTCTAAATCTTCTGTGGATCG 59.932 44.000 0.00 0.00 0.00 3.69
3432 3965 3.121445 CGAGAGGCGTCTGAAGTAAAAAC 59.879 47.826 14.78 0.00 30.97 2.43
3441 3974 0.466372 ATGGATCGAGAGGCGTCTGA 60.466 55.000 14.78 11.71 41.80 3.27
3445 3978 1.982660 TTCTATGGATCGAGAGGCGT 58.017 50.000 0.00 0.00 41.80 5.68
3454 3987 7.450124 TCTACGTGGAGTTATTCTATGGATC 57.550 40.000 0.00 0.00 0.00 3.36
3507 7273 1.081708 CCGCAACAACCGGTAAAGC 60.082 57.895 8.00 9.45 40.84 3.51
3523 7304 3.440522 TCTCAGTGACTCAACAGATACCG 59.559 47.826 0.00 0.00 0.00 4.02
3540 7321 7.065085 CCTGGTAATGTTATTGTTGAGTCTCAG 59.935 40.741 2.12 0.00 0.00 3.35
3557 7338 9.847224 ATGTTAGTTTTACTATCCCTGGTAATG 57.153 33.333 0.00 0.00 29.64 1.90
3562 7343 7.335627 TGTGATGTTAGTTTTACTATCCCTGG 58.664 38.462 0.00 0.00 29.64 4.45
3587 7368 9.653287 CATGACGTAACCATTTCCTATACATAT 57.347 33.333 0.00 0.00 0.00 1.78
3593 7374 5.130477 ACCTCATGACGTAACCATTTCCTAT 59.870 40.000 0.00 0.00 0.00 2.57
3610 7391 4.883026 GCTTGCTGCAACCTCATG 57.117 55.556 11.69 1.68 42.31 3.07
3629 7410 8.130671 ACACTAGTTAGGTTACATTGCTTAGA 57.869 34.615 0.00 0.00 0.00 2.10
3639 7420 8.298729 AGTACCCATAACACTAGTTAGGTTAC 57.701 38.462 6.47 2.35 43.02 2.50
3645 7426 9.979897 TTCTTCTAGTACCCATAACACTAGTTA 57.020 33.333 0.00 0.00 43.83 2.24
3690 7471 5.584649 TGATAAACTAATTGCGACCCTCTTG 59.415 40.000 0.00 0.00 0.00 3.02
3694 7480 7.773690 ACTTATTGATAAACTAATTGCGACCCT 59.226 33.333 0.00 0.00 0.00 4.34
3716 7502 7.994911 TCATAGGTAGACGTTCAGGATTACTTA 59.005 37.037 0.00 0.00 0.00 2.24
3721 7507 5.202004 ACTCATAGGTAGACGTTCAGGATT 58.798 41.667 0.00 0.00 0.00 3.01
3731 7517 9.223099 GAGATTAGGAGTAACTCATAGGTAGAC 57.777 40.741 0.00 0.00 28.59 2.59
3732 7518 8.946248 TGAGATTAGGAGTAACTCATAGGTAGA 58.054 37.037 0.00 0.00 33.57 2.59
3735 7521 6.778559 GGTGAGATTAGGAGTAACTCATAGGT 59.221 42.308 0.00 0.00 39.27 3.08
3736 7522 6.072397 CGGTGAGATTAGGAGTAACTCATAGG 60.072 46.154 0.00 0.00 39.27 2.57
3740 7526 4.398358 CACGGTGAGATTAGGAGTAACTCA 59.602 45.833 0.74 0.00 35.65 3.41
3741 7527 4.398673 ACACGGTGAGATTAGGAGTAACTC 59.601 45.833 16.29 0.00 0.00 3.01
3747 7533 4.158764 AGAAGAACACGGTGAGATTAGGAG 59.841 45.833 16.29 0.00 0.00 3.69
3750 7536 4.092091 GCAAGAAGAACACGGTGAGATTAG 59.908 45.833 16.29 0.00 0.00 1.73
3754 7540 1.412710 AGCAAGAAGAACACGGTGAGA 59.587 47.619 16.29 0.00 0.00 3.27
3756 7542 1.939934 CAAGCAAGAAGAACACGGTGA 59.060 47.619 16.29 0.00 0.00 4.02
3759 7545 0.662619 TGCAAGCAAGAAGAACACGG 59.337 50.000 0.00 0.00 0.00 4.94
3779 7567 3.578282 GGGATGTGATTTTCTTGTGGGTT 59.422 43.478 0.00 0.00 0.00 4.11
3782 7570 2.819608 ACGGGATGTGATTTTCTTGTGG 59.180 45.455 0.00 0.00 0.00 4.17
3794 7582 2.436646 GCACCTCCACGGGATGTG 60.437 66.667 17.78 17.78 46.30 3.21
3795 7583 2.607750 AGCACCTCCACGGGATGT 60.608 61.111 0.00 0.00 36.97 3.06
3796 7584 2.124983 CAGCACCTCCACGGGATG 60.125 66.667 0.00 0.00 36.97 3.51
3797 7585 4.101448 GCAGCACCTCCACGGGAT 62.101 66.667 0.00 0.00 36.97 3.85
3801 7589 0.318107 CTTTTTGCAGCACCTCCACG 60.318 55.000 0.00 0.00 0.00 4.94
3802 7590 0.598419 GCTTTTTGCAGCACCTCCAC 60.598 55.000 0.00 0.00 42.31 4.02
3803 7591 1.741525 GCTTTTTGCAGCACCTCCA 59.258 52.632 0.00 0.00 42.31 3.86
3819 7607 2.887151 AATCACCTACCTTTGCTGCT 57.113 45.000 0.00 0.00 0.00 4.24
3820 7608 3.942130 AAAATCACCTACCTTTGCTGC 57.058 42.857 0.00 0.00 0.00 5.25
3863 7651 2.567985 TGATGTATCTGCATGCAGTGG 58.432 47.619 39.08 21.41 43.96 4.00
3887 7675 2.007608 GTCCCAAAACGATGCTCCTAC 58.992 52.381 0.00 0.00 0.00 3.18
3889 7677 0.322546 GGTCCCAAAACGATGCTCCT 60.323 55.000 0.00 0.00 0.00 3.69
3896 7684 0.741915 GCAGTTTGGTCCCAAAACGA 59.258 50.000 12.85 0.00 45.86 3.85
3902 7690 2.757894 TTTAAGGCAGTTTGGTCCCA 57.242 45.000 0.00 0.00 0.00 4.37
3903 7691 3.802329 GCTTTTTAAGGCAGTTTGGTCCC 60.802 47.826 0.00 0.00 0.00 4.46
3904 7692 3.181470 TGCTTTTTAAGGCAGTTTGGTCC 60.181 43.478 0.00 0.00 34.22 4.46
3905 7693 4.053469 TGCTTTTTAAGGCAGTTTGGTC 57.947 40.909 0.00 0.00 34.22 4.02
3906 7694 4.479786 TTGCTTTTTAAGGCAGTTTGGT 57.520 36.364 0.00 0.00 39.68 3.67
3907 7695 7.671495 AATATTGCTTTTTAAGGCAGTTTGG 57.329 32.000 0.32 0.00 39.68 3.28
3911 7699 9.639601 GTCTAAAATATTGCTTTTTAAGGCAGT 57.360 29.630 0.00 0.19 39.68 4.40
3912 7700 9.638239 TGTCTAAAATATTGCTTTTTAAGGCAG 57.362 29.630 0.00 0.00 39.68 4.85
3913 7701 9.418045 GTGTCTAAAATATTGCTTTTTAAGGCA 57.582 29.630 0.00 0.00 36.62 4.75
3914 7702 9.418045 TGTGTCTAAAATATTGCTTTTTAAGGC 57.582 29.630 0.00 0.00 30.46 4.35
3921 7709 9.762933 ACATTGTTGTGTCTAAAATATTGCTTT 57.237 25.926 0.00 0.00 33.85 3.51
3922 7710 9.762933 AACATTGTTGTGTCTAAAATATTGCTT 57.237 25.926 0.15 0.00 35.83 3.91
3923 7711 9.762933 AAACATTGTTGTGTCTAAAATATTGCT 57.237 25.926 2.13 0.00 35.83 3.91
3931 7719 9.781834 CAGAGTAAAAACATTGTTGTGTCTAAA 57.218 29.630 2.13 0.00 35.83 1.85
3932 7720 8.952278 ACAGAGTAAAAACATTGTTGTGTCTAA 58.048 29.630 2.13 0.00 35.83 2.10
3933 7721 8.500753 ACAGAGTAAAAACATTGTTGTGTCTA 57.499 30.769 2.13 0.00 35.83 2.59
3934 7722 7.391148 ACAGAGTAAAAACATTGTTGTGTCT 57.609 32.000 2.13 0.17 35.83 3.41
3935 7723 7.753132 TCAACAGAGTAAAAACATTGTTGTGTC 59.247 33.333 17.14 0.00 43.40 3.67
3936 7724 7.598278 TCAACAGAGTAAAAACATTGTTGTGT 58.402 30.769 17.14 0.00 43.40 3.72
3937 7725 8.459521 TTCAACAGAGTAAAAACATTGTTGTG 57.540 30.769 17.14 0.00 43.40 3.33
3938 7726 8.519526 TCTTCAACAGAGTAAAAACATTGTTGT 58.480 29.630 17.14 0.00 43.40 3.32
3939 7727 8.909708 TCTTCAACAGAGTAAAAACATTGTTG 57.090 30.769 2.13 14.05 43.96 3.33
3940 7728 9.520204 CATCTTCAACAGAGTAAAAACATTGTT 57.480 29.630 0.00 0.00 33.87 2.83
3941 7729 7.649306 GCATCTTCAACAGAGTAAAAACATTGT 59.351 33.333 0.00 0.00 33.87 2.71
3942 7730 7.864379 AGCATCTTCAACAGAGTAAAAACATTG 59.136 33.333 0.00 0.00 33.87 2.82
3943 7731 7.945134 AGCATCTTCAACAGAGTAAAAACATT 58.055 30.769 0.00 0.00 33.87 2.71
3944 7732 7.516198 AGCATCTTCAACAGAGTAAAAACAT 57.484 32.000 0.00 0.00 33.87 2.71
3945 7733 6.942532 AGCATCTTCAACAGAGTAAAAACA 57.057 33.333 0.00 0.00 33.87 2.83
3963 7751 8.640291 GTTAGTATTAAGCATCGTTAGAGCATC 58.360 37.037 0.00 0.00 0.00 3.91
3964 7752 8.141909 TGTTAGTATTAAGCATCGTTAGAGCAT 58.858 33.333 0.00 0.00 0.00 3.79
3965 7753 7.485810 TGTTAGTATTAAGCATCGTTAGAGCA 58.514 34.615 0.00 0.00 0.00 4.26
3966 7754 7.648510 ACTGTTAGTATTAAGCATCGTTAGAGC 59.351 37.037 0.00 0.00 0.00 4.09
3967 7755 9.517609 AACTGTTAGTATTAAGCATCGTTAGAG 57.482 33.333 0.00 0.00 0.00 2.43
3971 7759 9.595823 ACATAACTGTTAGTATTAAGCATCGTT 57.404 29.630 6.40 0.00 28.70 3.85
3972 7760 9.595823 AACATAACTGTTAGTATTAAGCATCGT 57.404 29.630 6.40 0.00 43.77 3.73
3994 7782 9.955102 ATGATGATGCTAGTACATATTGAACAT 57.045 29.630 0.00 0.00 0.00 2.71
3997 7785 9.591792 GCTATGATGATGCTAGTACATATTGAA 57.408 33.333 0.00 0.00 0.00 2.69
3998 7786 8.752187 TGCTATGATGATGCTAGTACATATTGA 58.248 33.333 0.00 0.00 0.00 2.57
3999 7787 8.937634 TGCTATGATGATGCTAGTACATATTG 57.062 34.615 0.00 0.00 0.00 1.90
4003 7791 8.534496 TGTTATGCTATGATGATGCTAGTACAT 58.466 33.333 0.00 0.00 0.00 2.29
4004 7792 7.895759 TGTTATGCTATGATGATGCTAGTACA 58.104 34.615 0.00 0.00 0.00 2.90
4005 7793 8.763049 TTGTTATGCTATGATGATGCTAGTAC 57.237 34.615 0.00 0.00 0.00 2.73
4006 7794 9.948964 ATTTGTTATGCTATGATGATGCTAGTA 57.051 29.630 0.00 0.00 0.00 1.82
4007 7795 8.859236 ATTTGTTATGCTATGATGATGCTAGT 57.141 30.769 0.00 0.00 0.00 2.57
4013 7801 9.918630 GGCTTTAATTTGTTATGCTATGATGAT 57.081 29.630 0.00 0.00 0.00 2.45
4014 7802 8.075574 CGGCTTTAATTTGTTATGCTATGATGA 58.924 33.333 0.00 0.00 0.00 2.92
4015 7803 7.326789 CCGGCTTTAATTTGTTATGCTATGATG 59.673 37.037 0.00 0.00 0.00 3.07
4016 7804 7.014230 ACCGGCTTTAATTTGTTATGCTATGAT 59.986 33.333 0.00 0.00 0.00 2.45
4017 7805 6.320164 ACCGGCTTTAATTTGTTATGCTATGA 59.680 34.615 0.00 0.00 0.00 2.15
4018 7806 6.417635 CACCGGCTTTAATTTGTTATGCTATG 59.582 38.462 0.00 0.00 0.00 2.23
4019 7807 6.460953 CCACCGGCTTTAATTTGTTATGCTAT 60.461 38.462 0.00 0.00 0.00 2.97
4020 7808 5.163602 CCACCGGCTTTAATTTGTTATGCTA 60.164 40.000 0.00 0.00 0.00 3.49
4021 7809 4.381505 CCACCGGCTTTAATTTGTTATGCT 60.382 41.667 0.00 0.00 0.00 3.79
4022 7810 3.862845 CCACCGGCTTTAATTTGTTATGC 59.137 43.478 0.00 0.00 0.00 3.14
4023 7811 5.066968 ACCACCGGCTTTAATTTGTTATG 57.933 39.130 0.00 0.00 0.00 1.90
4024 7812 5.731957 AACCACCGGCTTTAATTTGTTAT 57.268 34.783 0.00 0.00 0.00 1.89
4025 7813 5.068723 TCAAACCACCGGCTTTAATTTGTTA 59.931 36.000 0.00 0.00 0.00 2.41
4026 7814 4.123506 CAAACCACCGGCTTTAATTTGTT 58.876 39.130 0.00 0.00 0.00 2.83
4027 7815 3.385111 TCAAACCACCGGCTTTAATTTGT 59.615 39.130 0.00 0.00 0.00 2.83
4028 7816 3.983741 TCAAACCACCGGCTTTAATTTG 58.016 40.909 0.00 4.64 0.00 2.32
4029 7817 4.674281 TTCAAACCACCGGCTTTAATTT 57.326 36.364 0.00 0.00 0.00 1.82
4030 7818 4.100344 ACTTTCAAACCACCGGCTTTAATT 59.900 37.500 0.00 0.00 0.00 1.40
4031 7819 3.639561 ACTTTCAAACCACCGGCTTTAAT 59.360 39.130 0.00 0.00 0.00 1.40
4032 7820 3.025262 ACTTTCAAACCACCGGCTTTAA 58.975 40.909 0.00 0.00 0.00 1.52
4033 7821 2.657143 ACTTTCAAACCACCGGCTTTA 58.343 42.857 0.00 0.00 0.00 1.85
4034 7822 1.480789 ACTTTCAAACCACCGGCTTT 58.519 45.000 0.00 0.00 0.00 3.51
4035 7823 1.480789 AACTTTCAAACCACCGGCTT 58.519 45.000 0.00 0.00 0.00 4.35
4036 7824 2.351706 TAACTTTCAAACCACCGGCT 57.648 45.000 0.00 0.00 0.00 5.52
4037 7825 3.653539 ATTAACTTTCAAACCACCGGC 57.346 42.857 0.00 0.00 0.00 6.13
4038 7826 5.008811 TGTGTATTAACTTTCAAACCACCGG 59.991 40.000 0.00 0.00 0.00 5.28
4039 7827 6.062434 TGTGTATTAACTTTCAAACCACCG 57.938 37.500 0.00 0.00 0.00 4.94
4040 7828 7.034685 ACTGTGTATTAACTTTCAAACCACC 57.965 36.000 0.00 0.00 0.00 4.61
4050 7838 9.747898 TCCCATGAAAATACTGTGTATTAACTT 57.252 29.630 0.00 0.00 0.00 2.66
4051 7839 9.920946 ATCCCATGAAAATACTGTGTATTAACT 57.079 29.630 0.00 0.00 0.00 2.24
4057 7845 8.962679 GGTAAAATCCCATGAAAATACTGTGTA 58.037 33.333 0.00 0.00 0.00 2.90
4058 7846 7.362574 CGGTAAAATCCCATGAAAATACTGTGT 60.363 37.037 0.00 0.00 0.00 3.72
4059 7847 6.972328 CGGTAAAATCCCATGAAAATACTGTG 59.028 38.462 0.00 0.00 0.00 3.66
4060 7848 6.887545 TCGGTAAAATCCCATGAAAATACTGT 59.112 34.615 0.00 0.00 0.00 3.55
4061 7849 7.067008 ACTCGGTAAAATCCCATGAAAATACTG 59.933 37.037 0.00 0.00 0.00 2.74
4062 7850 7.116736 ACTCGGTAAAATCCCATGAAAATACT 58.883 34.615 0.00 0.00 0.00 2.12
4063 7851 7.066525 TGACTCGGTAAAATCCCATGAAAATAC 59.933 37.037 0.00 0.00 0.00 1.89
4064 7852 7.113437 TGACTCGGTAAAATCCCATGAAAATA 58.887 34.615 0.00 0.00 0.00 1.40
4065 7853 5.949354 TGACTCGGTAAAATCCCATGAAAAT 59.051 36.000 0.00 0.00 0.00 1.82
4066 7854 5.317808 TGACTCGGTAAAATCCCATGAAAA 58.682 37.500 0.00 0.00 0.00 2.29
4067 7855 4.912586 TGACTCGGTAAAATCCCATGAAA 58.087 39.130 0.00 0.00 0.00 2.69
4068 7856 4.561500 TGACTCGGTAAAATCCCATGAA 57.438 40.909 0.00 0.00 0.00 2.57
4069 7857 4.771114 ATGACTCGGTAAAATCCCATGA 57.229 40.909 0.00 0.00 0.00 3.07
4070 7858 4.024893 CGAATGACTCGGTAAAATCCCATG 60.025 45.833 0.00 0.00 44.20 3.66
4071 7859 4.127171 CGAATGACTCGGTAAAATCCCAT 58.873 43.478 0.00 0.00 44.20 4.00
4072 7860 3.527533 CGAATGACTCGGTAAAATCCCA 58.472 45.455 0.00 0.00 44.20 4.37
4094 7882 1.301479 GTTGACTCCGGGTGGTCAC 60.301 63.158 19.73 13.50 41.36 3.67
4095 7883 1.338890 TTGTTGACTCCGGGTGGTCA 61.339 55.000 17.32 17.32 40.17 4.02
4096 7884 0.179040 TTTGTTGACTCCGGGTGGTC 60.179 55.000 0.00 8.85 36.30 4.02
4097 7885 0.476771 ATTTGTTGACTCCGGGTGGT 59.523 50.000 0.00 0.00 36.30 4.16
4098 7886 1.165270 GATTTGTTGACTCCGGGTGG 58.835 55.000 0.00 0.00 0.00 4.61
4099 7887 1.806542 CAGATTTGTTGACTCCGGGTG 59.193 52.381 0.00 0.00 0.00 4.61
4100 7888 1.420138 ACAGATTTGTTGACTCCGGGT 59.580 47.619 0.00 0.00 32.28 5.28
4101 7889 2.185004 ACAGATTTGTTGACTCCGGG 57.815 50.000 0.00 0.00 32.28 5.73
4102 7890 4.568152 AAAACAGATTTGTTGACTCCGG 57.432 40.909 1.85 0.00 46.54 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.