Multiple sequence alignment - TraesCS6A01G299800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G299800 chr6A 100.000 2954 0 0 1 2954 532871654 532874607 0.000000e+00 5456.0
1 TraesCS6A01G299800 chr6A 77.204 465 67 28 1334 1768 532846354 532846809 5.500000e-58 235.0
2 TraesCS6A01G299800 chr6A 81.132 159 21 6 1353 1508 532872970 532873122 5.780000e-23 119.0
3 TraesCS6A01G299800 chr6A 81.132 159 21 6 1317 1469 532873006 532873161 5.780000e-23 119.0
4 TraesCS6A01G299800 chr6A 100.000 41 0 0 3259 3299 532874912 532874952 3.530000e-10 76.8
5 TraesCS6A01G299800 chr6D 92.283 920 50 12 1416 2332 387729320 387730221 0.000000e+00 1286.0
6 TraesCS6A01G299800 chr6D 97.093 516 14 1 873 1387 387728857 387729372 0.000000e+00 869.0
7 TraesCS6A01G299800 chr6D 85.241 332 38 3 1 332 387727441 387727761 6.820000e-87 331.0
8 TraesCS6A01G299800 chr6D 78.821 458 69 10 1347 1800 387650433 387650866 1.940000e-72 283.0
9 TraesCS6A01G299800 chr6D 87.395 238 29 1 2470 2706 316318090 316317853 4.190000e-69 272.0
10 TraesCS6A01G299800 chr6D 73.724 784 121 61 1075 1796 387723440 387724200 9.210000e-56 228.0
11 TraesCS6A01G299800 chr6D 92.308 156 11 1 682 837 387728701 387728855 1.540000e-53 220.0
12 TraesCS6A01G299800 chr6D 76.330 376 63 17 1075 1425 387649955 387650329 9.410000e-41 178.0
13 TraesCS6A01G299800 chr6B 88.465 997 56 24 1353 2315 578745229 578746200 0.000000e+00 1149.0
14 TraesCS6A01G299800 chr6B 87.461 646 41 13 754 1391 578744690 578745303 0.000000e+00 708.0
15 TraesCS6A01G299800 chr6B 75.798 752 121 32 1080 1823 578557098 578557796 1.140000e-84 324.0
16 TraesCS6A01G299800 chr6B 98.387 62 1 0 2356 2417 578746201 578746262 3.480000e-20 110.0
17 TraesCS6A01G299800 chr7D 79.389 655 109 16 1 653 154914049 154914679 3.910000e-119 438.0
18 TraesCS6A01G299800 chr7D 86.154 260 31 5 1 256 58354473 58354731 3.240000e-70 276.0
19 TraesCS6A01G299800 chr7D 74.037 597 107 38 110 688 590901319 590901885 2.010000e-47 200.0
20 TraesCS6A01G299800 chr7D 76.157 432 68 24 41 462 461815175 461814769 9.340000e-46 195.0
21 TraesCS6A01G299800 chr7D 75.291 429 70 25 278 697 625636628 625636227 4.380000e-39 172.0
22 TraesCS6A01G299800 chr4D 89.256 242 25 1 2470 2710 464249286 464249045 5.350000e-78 302.0
23 TraesCS6A01G299800 chr4D 86.640 247 31 2 2705 2949 388702232 388701986 4.190000e-69 272.0
24 TraesCS6A01G299800 chr4D 87.083 240 20 9 2704 2936 455656676 455656441 9.080000e-66 261.0
25 TraesCS6A01G299800 chr4D 74.333 600 120 27 96 686 459924841 459925415 1.190000e-54 224.0
26 TraesCS6A01G299800 chr5B 87.903 248 24 4 2711 2953 55499263 55499017 1.500000e-73 287.0
27 TraesCS6A01G299800 chr5B 85.020 247 30 6 2712 2954 125261699 125261456 9.140000e-61 244.0
28 TraesCS6A01G299800 chr5A 88.066 243 25 2 2706 2944 277326356 277326598 5.390000e-73 285.0
29 TraesCS6A01G299800 chr3D 88.655 238 22 3 2712 2944 615488433 615488196 5.390000e-73 285.0
30 TraesCS6A01G299800 chr3D 78.571 238 46 5 2470 2704 166955780 166955545 5.700000e-33 152.0
31 TraesCS6A01G299800 chr1B 89.177 231 20 4 2716 2941 562508032 562508262 1.940000e-72 283.0
32 TraesCS6A01G299800 chr1B 83.000 200 33 1 2468 2666 190238833 190238634 2.620000e-41 180.0
33 TraesCS6A01G299800 chr1B 75.083 301 68 7 93 389 368568023 368567726 2.070000e-27 134.0
34 TraesCS6A01G299800 chr1B 74.733 281 44 18 118 391 534231506 534231246 2.090000e-17 100.0
35 TraesCS6A01G299800 chr2A 87.600 250 22 7 2706 2953 665830367 665830125 6.970000e-72 281.0
36 TraesCS6A01G299800 chr2A 84.018 219 33 2 2468 2684 480651024 480651242 3.340000e-50 209.0
37 TraesCS6A01G299800 chr1D 86.076 237 28 3 2712 2944 61978901 61978666 1.970000e-62 250.0
38 TraesCS6A01G299800 chr1D 72.194 597 117 34 107 688 233919491 233918929 1.600000e-28 137.0
39 TraesCS6A01G299800 chr7A 83.750 240 32 6 2470 2706 628483357 628483122 1.540000e-53 220.0
40 TraesCS6A01G299800 chr7A 73.884 605 113 35 96 686 32179443 32180016 2.010000e-47 200.0
41 TraesCS6A01G299800 chr7A 83.871 186 29 1 36 220 156561218 156561033 3.380000e-40 176.0
42 TraesCS6A01G299800 chr2D 74.210 601 113 33 96 688 601980832 601981398 2.580000e-51 213.0
43 TraesCS6A01G299800 chrUn 82.700 237 38 3 2475 2710 384591449 384591215 1.200000e-49 207.0
44 TraesCS6A01G299800 chrUn 82.700 237 38 3 2475 2710 475532708 475532474 1.200000e-49 207.0
45 TraesCS6A01G299800 chrUn 75.427 293 58 13 111 397 51210671 51210387 2.670000e-26 130.0
46 TraesCS6A01G299800 chr3B 81.356 236 41 3 2474 2707 152971104 152971338 4.350000e-44 189.0
47 TraesCS6A01G299800 chr4A 73.254 587 118 32 107 686 237098092 237098646 9.410000e-41 178.0
48 TraesCS6A01G299800 chr3A 72.968 603 118 34 95 686 359367287 359366719 5.660000e-38 169.0
49 TraesCS6A01G299800 chr5D 76.897 290 52 5 93 379 420981035 420980758 2.050000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G299800 chr6A 532871654 532874952 3298 False 1442.700000 5456 90.566000 1 3299 4 chr6A.!!$F2 3298
1 TraesCS6A01G299800 chr6D 387723440 387730221 6781 False 586.800000 1286 88.129800 1 2332 5 chr6D.!!$F2 2331
2 TraesCS6A01G299800 chr6D 387649955 387650866 911 False 230.500000 283 77.575500 1075 1800 2 chr6D.!!$F1 725
3 TraesCS6A01G299800 chr6B 578744690 578746262 1572 False 655.666667 1149 91.437667 754 2417 3 chr6B.!!$F2 1663
4 TraesCS6A01G299800 chr6B 578557098 578557796 698 False 324.000000 324 75.798000 1080 1823 1 chr6B.!!$F1 743
5 TraesCS6A01G299800 chr7D 154914049 154914679 630 False 438.000000 438 79.389000 1 653 1 chr7D.!!$F2 652
6 TraesCS6A01G299800 chr4D 459924841 459925415 574 False 224.000000 224 74.333000 96 686 1 chr4D.!!$F1 590
7 TraesCS6A01G299800 chr2D 601980832 601981398 566 False 213.000000 213 74.210000 96 688 1 chr2D.!!$F1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 5152 0.25051 TGCGGATGTGGCTGTTGTTA 60.251 50.0 0.0 0.0 0.0 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2339 7332 0.034059 CCGCTGCTAGTAATCCCCTG 59.966 60.0 0.0 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 4027 1.341852 TGGTGACGATCGGTTCTTTCA 59.658 47.619 20.98 9.89 0.00 2.69
34 4037 1.723220 GGTTCTTTCACGGCTCTACC 58.277 55.000 0.00 0.00 0.00 3.18
105 4110 8.882736 CAAAGACTGTGATATGCATGTAACTAA 58.117 33.333 10.16 0.00 0.00 2.24
183 4191 5.417754 TCTCAAGCATCAGTCTTGATCTT 57.582 39.130 5.98 0.00 45.96 2.40
236 4245 4.019771 TGGTTATATCTGGCAATGGCGATA 60.020 41.667 17.73 17.73 42.47 2.92
246 4255 3.300009 GCAATGGCGATACTTATTGTGC 58.700 45.455 0.00 0.00 34.04 4.57
256 4265 5.978919 CGATACTTATTGTGCCGTTACCTTA 59.021 40.000 0.00 0.00 0.00 2.69
263 4272 4.274602 TGTGCCGTTACCTTATTGAAGA 57.725 40.909 0.00 0.00 34.25 2.87
271 4280 6.128007 CCGTTACCTTATTGAAGACATTGCTT 60.128 38.462 0.00 0.00 34.25 3.91
273 4282 7.360861 CGTTACCTTATTGAAGACATTGCTTGA 60.361 37.037 0.00 0.00 34.25 3.02
274 4283 6.899393 ACCTTATTGAAGACATTGCTTGAA 57.101 33.333 0.00 0.00 34.25 2.69
275 4284 7.472334 ACCTTATTGAAGACATTGCTTGAAT 57.528 32.000 9.21 9.21 36.10 2.57
276 4285 7.899973 ACCTTATTGAAGACATTGCTTGAATT 58.100 30.769 9.41 0.00 34.37 2.17
277 4286 8.370182 ACCTTATTGAAGACATTGCTTGAATTT 58.630 29.630 9.41 0.00 34.37 1.82
278 4287 8.653338 CCTTATTGAAGACATTGCTTGAATTTG 58.347 33.333 9.41 5.32 34.37 2.32
279 4288 5.910637 TTGAAGACATTGCTTGAATTTGC 57.089 34.783 0.00 0.00 0.00 3.68
280 4289 5.204409 TGAAGACATTGCTTGAATTTGCT 57.796 34.783 0.00 0.00 0.00 3.91
281 4290 5.603596 TGAAGACATTGCTTGAATTTGCTT 58.396 33.333 0.00 0.00 0.00 3.91
282 4291 5.464057 TGAAGACATTGCTTGAATTTGCTTG 59.536 36.000 0.00 0.00 0.00 4.01
291 4300 4.571984 GCTTGAATTTGCTTGGACTTGTTT 59.428 37.500 0.00 0.00 0.00 2.83
332 4351 3.874383 TCTGGTCTTTGATGGTTGGAA 57.126 42.857 0.00 0.00 0.00 3.53
334 4353 3.138283 TCTGGTCTTTGATGGTTGGAACT 59.862 43.478 0.00 0.00 0.00 3.01
408 5108 2.425143 ATCCTTGTCGAGGTACCGTA 57.575 50.000 6.18 0.00 46.39 4.02
409 5109 1.453155 TCCTTGTCGAGGTACCGTAC 58.547 55.000 6.18 6.81 46.39 3.67
430 5130 3.686241 ACCGATGATGTCAAGTGATTGTG 59.314 43.478 0.00 0.00 0.00 3.33
440 5140 1.671979 AGTGATTGTGGATGCGGATG 58.328 50.000 0.00 0.00 0.00 3.51
444 5144 1.386525 ATTGTGGATGCGGATGTGGC 61.387 55.000 0.00 0.00 0.00 5.01
452 5152 0.250510 TGCGGATGTGGCTGTTGTTA 60.251 50.000 0.00 0.00 0.00 2.41
517 5219 6.903883 TTATTCCGTCAAGACATAGCTTTC 57.096 37.500 0.00 0.00 0.00 2.62
543 5245 5.820423 TCTTGTTTGACTTTGCTAGTTGCTA 59.180 36.000 0.00 0.00 43.37 3.49
544 5246 6.486657 TCTTGTTTGACTTTGCTAGTTGCTAT 59.513 34.615 0.00 0.00 43.37 2.97
548 5250 6.633500 TTGACTTTGCTAGTTGCTATTGTT 57.367 33.333 0.00 0.00 43.37 2.83
550 5252 7.921786 TGACTTTGCTAGTTGCTATTGTTAT 57.078 32.000 0.00 0.00 43.37 1.89
580 5282 3.055747 TGTGTGTGTGAGAGTTGGTTGTA 60.056 43.478 0.00 0.00 0.00 2.41
585 5287 3.058914 GTGTGAGAGTTGGTTGTATGCAC 60.059 47.826 0.00 0.00 0.00 4.57
593 5295 4.473559 AGTTGGTTGTATGCACCCTAGTAT 59.526 41.667 0.00 0.00 0.00 2.12
595 5297 5.444744 TGGTTGTATGCACCCTAGTATTT 57.555 39.130 0.00 0.00 0.00 1.40
596 5298 6.563037 TGGTTGTATGCACCCTAGTATTTA 57.437 37.500 0.00 0.00 0.00 1.40
597 5299 7.144234 TGGTTGTATGCACCCTAGTATTTAT 57.856 36.000 0.00 0.00 0.00 1.40
598 5300 6.995686 TGGTTGTATGCACCCTAGTATTTATG 59.004 38.462 0.00 0.00 0.00 1.90
599 5301 6.996282 GGTTGTATGCACCCTAGTATTTATGT 59.004 38.462 0.00 0.00 0.00 2.29
600 5302 8.152246 GGTTGTATGCACCCTAGTATTTATGTA 58.848 37.037 0.00 0.00 0.00 2.29
601 5303 9.204570 GTTGTATGCACCCTAGTATTTATGTAG 57.795 37.037 0.00 0.00 0.00 2.74
602 5304 8.486942 TGTATGCACCCTAGTATTTATGTAGT 57.513 34.615 0.00 0.00 0.00 2.73
629 5333 0.318955 GGGTGTGTTGCTCATTGTGC 60.319 55.000 3.79 3.79 0.00 4.57
636 5340 4.037803 TGTGTTGCTCATTGTGCTTGTATT 59.962 37.500 11.58 0.00 0.00 1.89
638 5342 3.745332 TGCTCATTGTGCTTGTATTCG 57.255 42.857 11.58 0.00 0.00 3.34
656 5360 3.921119 TCGCTTGATGCTTCATTTTGT 57.079 38.095 2.75 0.00 40.11 2.83
658 5362 3.252944 TCGCTTGATGCTTCATTTTGTGA 59.747 39.130 2.75 4.39 40.11 3.58
659 5363 4.082625 TCGCTTGATGCTTCATTTTGTGAT 60.083 37.500 2.75 0.00 40.11 3.06
788 5492 0.832135 ACGGAGGAACAAGCAGAGGA 60.832 55.000 0.00 0.00 0.00 3.71
827 5531 5.616383 CGTATTCGTAATGAACTCGAGTCTC 59.384 44.000 20.33 17.72 40.00 3.36
838 5542 5.354513 TGAACTCGAGTCTCTATTTCATCGT 59.645 40.000 20.33 0.00 0.00 3.73
839 5543 5.412526 ACTCGAGTCTCTATTTCATCGTC 57.587 43.478 13.58 0.00 0.00 4.20
840 5544 5.120399 ACTCGAGTCTCTATTTCATCGTCT 58.880 41.667 13.58 0.00 0.00 4.18
841 5545 6.282167 ACTCGAGTCTCTATTTCATCGTCTA 58.718 40.000 13.58 0.00 0.00 2.59
844 5548 7.408123 TCGAGTCTCTATTTCATCGTCTAAAC 58.592 38.462 0.00 0.00 0.00 2.01
854 5558 1.063006 CGTCTAAACGCCGGATCGA 59.937 57.895 5.05 0.00 42.82 3.59
867 5571 0.318784 GGATCGAGAATTCGGGACCG 60.319 60.000 3.96 3.96 46.67 4.79
1245 5962 4.039092 AACGGCATGCAGGCTCCT 62.039 61.111 24.04 4.50 41.46 3.69
1394 6291 3.414272 GCAGGTGCCGATGATGAC 58.586 61.111 0.00 0.00 34.31 3.06
1395 6292 1.450134 GCAGGTGCCGATGATGACA 60.450 57.895 0.00 0.00 34.31 3.58
1396 6293 1.709147 GCAGGTGCCGATGATGACAC 61.709 60.000 0.00 0.00 34.31 3.67
1397 6294 1.153568 AGGTGCCGATGATGACACG 60.154 57.895 0.00 0.00 33.81 4.49
1398 6295 1.153647 GGTGCCGATGATGACACGA 60.154 57.895 0.00 0.00 33.81 4.35
1399 6296 1.421410 GGTGCCGATGATGACACGAC 61.421 60.000 0.00 0.00 33.81 4.34
1400 6297 0.735978 GTGCCGATGATGACACGACA 60.736 55.000 0.00 0.00 0.00 4.35
1401 6298 0.458370 TGCCGATGATGACACGACAG 60.458 55.000 0.00 0.00 0.00 3.51
1402 6299 1.756375 GCCGATGATGACACGACAGC 61.756 60.000 0.00 0.00 0.00 4.40
1403 6300 1.148157 CCGATGATGACACGACAGCC 61.148 60.000 0.00 0.00 0.00 4.85
1404 6301 1.474648 CGATGATGACACGACAGCCG 61.475 60.000 0.00 0.00 45.44 5.52
1405 6302 1.148157 GATGATGACACGACAGCCGG 61.148 60.000 0.00 0.00 43.93 6.13
1406 6303 3.188786 GATGACACGACAGCCGGC 61.189 66.667 21.89 21.89 43.93 6.13
1437 6334 1.450134 GCAGGTGCCGATGATGACA 60.450 57.895 0.00 0.00 34.31 3.58
1569 6511 3.696548 ACGCTCAGAATCAGACAGTGATA 59.303 43.478 0.00 0.00 45.89 2.15
1769 6711 4.052229 GCAGCAGCAGCAACAGGG 62.052 66.667 4.63 0.00 45.49 4.45
2079 7072 2.490685 GTCCCTCGGTTCTCGCTC 59.509 66.667 0.00 0.00 39.05 5.03
2094 7087 1.424635 GCTCGACGACTTCTACGCT 59.575 57.895 0.00 0.00 0.00 5.07
2315 7308 1.083806 TGATTCGGCACAGTGATCGC 61.084 55.000 4.15 0.00 0.00 4.58
2332 7325 2.639327 GCCGCTGGCCAATTTGAGT 61.639 57.895 7.01 0.00 44.06 3.41
2333 7326 1.508088 CCGCTGGCCAATTTGAGTC 59.492 57.895 7.01 0.00 0.00 3.36
2334 7327 1.135315 CGCTGGCCAATTTGAGTCG 59.865 57.895 7.01 0.00 0.00 4.18
2335 7328 1.577328 CGCTGGCCAATTTGAGTCGT 61.577 55.000 7.01 0.00 0.00 4.34
2336 7329 0.109597 GCTGGCCAATTTGAGTCGTG 60.110 55.000 7.01 0.00 0.00 4.35
2337 7330 1.522668 CTGGCCAATTTGAGTCGTGA 58.477 50.000 7.01 0.00 0.00 4.35
2338 7331 1.879380 CTGGCCAATTTGAGTCGTGAA 59.121 47.619 7.01 0.00 0.00 3.18
2339 7332 1.606668 TGGCCAATTTGAGTCGTGAAC 59.393 47.619 0.61 0.00 0.00 3.18
2340 7333 1.606668 GGCCAATTTGAGTCGTGAACA 59.393 47.619 0.00 0.00 0.00 3.18
2341 7334 2.350772 GGCCAATTTGAGTCGTGAACAG 60.351 50.000 0.00 0.00 0.00 3.16
2342 7335 2.350772 GCCAATTTGAGTCGTGAACAGG 60.351 50.000 0.00 0.00 0.00 4.00
2343 7336 2.226437 CCAATTTGAGTCGTGAACAGGG 59.774 50.000 0.00 0.00 0.00 4.45
2344 7337 2.185004 ATTTGAGTCGTGAACAGGGG 57.815 50.000 0.00 0.00 0.00 4.79
2345 7338 1.124780 TTTGAGTCGTGAACAGGGGA 58.875 50.000 0.00 0.00 0.00 4.81
2346 7339 1.348064 TTGAGTCGTGAACAGGGGAT 58.652 50.000 0.00 0.00 0.00 3.85
2347 7340 1.348064 TGAGTCGTGAACAGGGGATT 58.652 50.000 0.00 0.00 0.00 3.01
2348 7341 2.531771 TGAGTCGTGAACAGGGGATTA 58.468 47.619 0.00 0.00 0.00 1.75
2349 7342 2.232941 TGAGTCGTGAACAGGGGATTAC 59.767 50.000 0.00 0.00 0.00 1.89
2350 7343 2.496470 GAGTCGTGAACAGGGGATTACT 59.504 50.000 0.00 0.00 0.00 2.24
2351 7344 3.698040 GAGTCGTGAACAGGGGATTACTA 59.302 47.826 0.00 0.00 0.00 1.82
2352 7345 3.700038 AGTCGTGAACAGGGGATTACTAG 59.300 47.826 0.00 0.00 0.00 2.57
2353 7346 2.429610 TCGTGAACAGGGGATTACTAGC 59.570 50.000 0.00 0.00 0.00 3.42
2354 7347 2.167693 CGTGAACAGGGGATTACTAGCA 59.832 50.000 0.00 0.00 0.00 3.49
2421 7414 8.862325 TCTATATGGACATTGTGTTTGAACTT 57.138 30.769 0.00 0.00 0.00 2.66
2422 7415 9.952030 TCTATATGGACATTGTGTTTGAACTTA 57.048 29.630 0.00 0.00 0.00 2.24
2425 7418 6.707440 TGGACATTGTGTTTGAACTTATGT 57.293 33.333 0.00 0.00 32.13 2.29
2426 7419 7.106439 TGGACATTGTGTTTGAACTTATGTT 57.894 32.000 0.00 0.00 39.42 2.71
2427 7420 8.226819 TGGACATTGTGTTTGAACTTATGTTA 57.773 30.769 0.00 0.00 36.39 2.41
2428 7421 8.132362 TGGACATTGTGTTTGAACTTATGTTAC 58.868 33.333 0.00 0.00 36.39 2.50
2429 7422 8.349983 GGACATTGTGTTTGAACTTATGTTACT 58.650 33.333 0.00 0.00 36.39 2.24
2448 7441 8.289440 TGTTACTAGTTAACATCTCGTTTGTG 57.711 34.615 8.61 0.00 44.32 3.33
2449 7442 5.840940 ACTAGTTAACATCTCGTTTGTGC 57.159 39.130 8.61 0.00 39.14 4.57
2450 7443 5.539048 ACTAGTTAACATCTCGTTTGTGCT 58.461 37.500 8.61 0.00 39.14 4.40
2451 7444 5.989777 ACTAGTTAACATCTCGTTTGTGCTT 59.010 36.000 8.61 0.00 39.14 3.91
2452 7445 5.751243 AGTTAACATCTCGTTTGTGCTTT 57.249 34.783 8.61 0.00 39.14 3.51
2453 7446 5.748592 AGTTAACATCTCGTTTGTGCTTTC 58.251 37.500 8.61 0.00 39.14 2.62
2454 7447 5.295787 AGTTAACATCTCGTTTGTGCTTTCA 59.704 36.000 8.61 0.00 39.14 2.69
2455 7448 4.630894 AACATCTCGTTTGTGCTTTCAA 57.369 36.364 0.00 0.00 32.35 2.69
2456 7449 3.952535 ACATCTCGTTTGTGCTTTCAAC 58.047 40.909 0.00 0.00 0.00 3.18
2457 7450 3.376859 ACATCTCGTTTGTGCTTTCAACA 59.623 39.130 0.00 0.00 0.00 3.33
2458 7451 4.036734 ACATCTCGTTTGTGCTTTCAACAT 59.963 37.500 0.00 0.00 0.00 2.71
2459 7452 4.630894 TCTCGTTTGTGCTTTCAACATT 57.369 36.364 0.00 0.00 0.00 2.71
2460 7453 4.992688 TCTCGTTTGTGCTTTCAACATTT 58.007 34.783 0.00 0.00 0.00 2.32
2461 7454 5.406649 TCTCGTTTGTGCTTTCAACATTTT 58.593 33.333 0.00 0.00 0.00 1.82
2462 7455 5.288232 TCTCGTTTGTGCTTTCAACATTTTG 59.712 36.000 0.00 0.00 0.00 2.44
2463 7456 5.164233 TCGTTTGTGCTTTCAACATTTTGA 58.836 33.333 0.00 0.00 40.14 2.69
2464 7457 5.809562 TCGTTTGTGCTTTCAACATTTTGAT 59.190 32.000 0.00 0.00 41.50 2.57
2465 7458 6.975197 TCGTTTGTGCTTTCAACATTTTGATA 59.025 30.769 0.00 0.00 41.50 2.15
2466 7459 7.043722 TCGTTTGTGCTTTCAACATTTTGATAC 60.044 33.333 0.00 0.00 41.50 2.24
2467 7460 7.043458 CGTTTGTGCTTTCAACATTTTGATACT 60.043 33.333 0.00 0.00 41.50 2.12
2468 7461 8.603181 GTTTGTGCTTTCAACATTTTGATACTT 58.397 29.630 0.00 0.00 41.50 2.24
2469 7462 9.809096 TTTGTGCTTTCAACATTTTGATACTTA 57.191 25.926 0.00 0.00 41.50 2.24
2470 7463 9.462174 TTGTGCTTTCAACATTTTGATACTTAG 57.538 29.630 0.00 0.00 41.50 2.18
2471 7464 8.845227 TGTGCTTTCAACATTTTGATACTTAGA 58.155 29.630 0.00 0.00 41.50 2.10
2472 7465 9.334693 GTGCTTTCAACATTTTGATACTTAGAG 57.665 33.333 0.00 0.00 41.50 2.43
2473 7466 8.023128 TGCTTTCAACATTTTGATACTTAGAGC 58.977 33.333 0.00 0.00 41.50 4.09
2474 7467 8.023128 GCTTTCAACATTTTGATACTTAGAGCA 58.977 33.333 0.00 0.00 41.50 4.26
2475 7468 9.897744 CTTTCAACATTTTGATACTTAGAGCAA 57.102 29.630 0.00 0.00 41.50 3.91
2476 7469 9.677567 TTTCAACATTTTGATACTTAGAGCAAC 57.322 29.630 0.00 0.00 41.50 4.17
2477 7470 8.621532 TCAACATTTTGATACTTAGAGCAACT 57.378 30.769 0.00 0.00 36.79 3.16
2478 7471 8.721478 TCAACATTTTGATACTTAGAGCAACTC 58.279 33.333 0.00 0.00 36.79 3.01
2479 7472 7.617041 ACATTTTGATACTTAGAGCAACTCC 57.383 36.000 0.00 0.00 0.00 3.85
2480 7473 7.168219 ACATTTTGATACTTAGAGCAACTCCA 58.832 34.615 0.00 0.00 0.00 3.86
2481 7474 7.665559 ACATTTTGATACTTAGAGCAACTCCAA 59.334 33.333 0.00 0.00 0.00 3.53
2482 7475 7.435068 TTTTGATACTTAGAGCAACTCCAAC 57.565 36.000 0.00 0.00 0.00 3.77
2483 7476 4.744570 TGATACTTAGAGCAACTCCAACG 58.255 43.478 0.00 0.00 0.00 4.10
2484 7477 1.797025 ACTTAGAGCAACTCCAACGC 58.203 50.000 0.00 0.00 0.00 4.84
2485 7478 0.716108 CTTAGAGCAACTCCAACGCG 59.284 55.000 3.53 3.53 0.00 6.01
2486 7479 1.289109 TTAGAGCAACTCCAACGCGC 61.289 55.000 5.73 0.00 0.00 6.86
2487 7480 4.090057 GAGCAACTCCAACGCGCC 62.090 66.667 5.73 0.00 0.00 6.53
2490 7483 4.072088 CAACTCCAACGCGCCGAC 62.072 66.667 5.73 0.00 0.00 4.79
2496 7489 4.676586 CAACGCGCCGACCCAAAC 62.677 66.667 5.73 0.00 0.00 2.93
2504 7497 3.708734 CGACCCAAACGGACACGC 61.709 66.667 0.00 0.00 46.04 5.34
2505 7498 3.708734 GACCCAAACGGACACGCG 61.709 66.667 3.53 3.53 46.04 6.01
2509 7502 4.287967 CAAACGGACACGCGCGTT 62.288 61.111 35.90 24.24 46.04 4.84
2510 7503 4.287967 AAACGGACACGCGCGTTG 62.288 61.111 35.90 28.66 46.04 4.10
2523 7516 4.792125 CGTTGTCCGCTTTTCGTC 57.208 55.556 0.00 0.00 36.19 4.20
2524 7517 1.203313 CGTTGTCCGCTTTTCGTCC 59.797 57.895 0.00 0.00 36.19 4.79
2525 7518 1.203313 GTTGTCCGCTTTTCGTCCG 59.797 57.895 0.00 0.00 36.19 4.79
2526 7519 1.227321 TTGTCCGCTTTTCGTCCGT 60.227 52.632 0.00 0.00 36.19 4.69
2527 7520 0.810823 TTGTCCGCTTTTCGTCCGTT 60.811 50.000 0.00 0.00 36.19 4.44
2528 7521 0.810823 TGTCCGCTTTTCGTCCGTTT 60.811 50.000 0.00 0.00 36.19 3.60
2529 7522 1.139163 GTCCGCTTTTCGTCCGTTTA 58.861 50.000 0.00 0.00 36.19 2.01
2530 7523 1.125566 GTCCGCTTTTCGTCCGTTTAG 59.874 52.381 0.00 0.00 36.19 1.85
2531 7524 0.441145 CCGCTTTTCGTCCGTTTAGG 59.559 55.000 0.00 0.00 36.97 2.69
2532 7525 1.142474 CGCTTTTCGTCCGTTTAGGT 58.858 50.000 0.00 0.00 41.99 3.08
2533 7526 1.125566 CGCTTTTCGTCCGTTTAGGTC 59.874 52.381 0.00 0.00 41.99 3.85
2537 7530 2.507769 CGTCCGTTTAGGTCGGCC 60.508 66.667 0.00 0.00 45.53 6.13
2538 7531 2.658422 GTCCGTTTAGGTCGGCCA 59.342 61.111 9.71 0.00 46.49 5.36
2539 7532 1.447314 GTCCGTTTAGGTCGGCCAG 60.447 63.158 9.71 0.00 46.49 4.85
2540 7533 2.125269 CCGTTTAGGTCGGCCAGG 60.125 66.667 9.71 0.00 41.48 4.45
2541 7534 2.818274 CGTTTAGGTCGGCCAGGC 60.818 66.667 9.71 1.26 37.19 4.85
2542 7535 2.818274 GTTTAGGTCGGCCAGGCG 60.818 66.667 9.71 7.36 37.19 5.52
2543 7536 4.090588 TTTAGGTCGGCCAGGCGG 62.091 66.667 9.71 12.92 37.19 6.13
2562 7555 2.351435 CGTGCGCGTTCGGTTTTT 60.351 55.556 12.43 0.00 35.95 1.94
2563 7556 2.344237 CGTGCGCGTTCGGTTTTTC 61.344 57.895 12.43 0.00 35.95 2.29
2564 7557 1.297745 GTGCGCGTTCGGTTTTTCA 60.298 52.632 8.43 0.00 35.95 2.69
2565 7558 0.659123 GTGCGCGTTCGGTTTTTCAT 60.659 50.000 8.43 0.00 35.95 2.57
2566 7559 0.029567 TGCGCGTTCGGTTTTTCATT 59.970 45.000 8.43 0.00 35.95 2.57
2567 7560 1.125270 GCGCGTTCGGTTTTTCATTT 58.875 45.000 8.43 0.00 35.95 2.32
2568 7561 1.137019 GCGCGTTCGGTTTTTCATTTG 60.137 47.619 8.43 0.00 35.95 2.32
2569 7562 2.376956 CGCGTTCGGTTTTTCATTTGA 58.623 42.857 0.00 0.00 0.00 2.69
2570 7563 2.400408 CGCGTTCGGTTTTTCATTTGAG 59.600 45.455 0.00 0.00 0.00 3.02
2571 7564 3.368495 GCGTTCGGTTTTTCATTTGAGT 58.632 40.909 0.00 0.00 0.00 3.41
2572 7565 3.420904 GCGTTCGGTTTTTCATTTGAGTC 59.579 43.478 0.00 0.00 0.00 3.36
2573 7566 3.657625 CGTTCGGTTTTTCATTTGAGTCG 59.342 43.478 0.00 0.00 0.00 4.18
2574 7567 3.889196 TCGGTTTTTCATTTGAGTCGG 57.111 42.857 0.00 0.00 0.00 4.79
2575 7568 2.031508 TCGGTTTTTCATTTGAGTCGGC 60.032 45.455 0.00 0.00 0.00 5.54
2576 7569 2.287308 CGGTTTTTCATTTGAGTCGGCA 60.287 45.455 0.00 0.00 0.00 5.69
2577 7570 3.308530 GGTTTTTCATTTGAGTCGGCAG 58.691 45.455 0.00 0.00 0.00 4.85
2578 7571 3.308530 GTTTTTCATTTGAGTCGGCAGG 58.691 45.455 0.00 0.00 0.00 4.85
2579 7572 2.270352 TTTCATTTGAGTCGGCAGGT 57.730 45.000 0.00 0.00 0.00 4.00
2580 7573 1.522668 TTCATTTGAGTCGGCAGGTG 58.477 50.000 0.00 0.00 0.00 4.00
2581 7574 0.955428 TCATTTGAGTCGGCAGGTGC 60.955 55.000 0.00 0.00 41.14 5.01
2582 7575 2.034879 ATTTGAGTCGGCAGGTGCG 61.035 57.895 0.00 0.00 43.26 5.34
2601 7594 3.793888 CCAACGGGAGGCCTACCC 61.794 72.222 29.54 25.97 43.57 3.69
2608 7601 2.586648 GGGAGGCCTACCCATTTATG 57.413 55.000 25.58 0.00 46.05 1.90
2609 7602 1.547901 GGGAGGCCTACCCATTTATGC 60.548 57.143 25.58 0.00 46.05 3.14
2610 7603 1.425448 GGAGGCCTACCCATTTATGCT 59.575 52.381 4.42 0.00 36.11 3.79
2611 7604 2.508526 GAGGCCTACCCATTTATGCTG 58.491 52.381 4.42 0.00 36.11 4.41
2612 7605 2.106511 GAGGCCTACCCATTTATGCTGA 59.893 50.000 4.42 0.00 36.11 4.26
2613 7606 2.718609 AGGCCTACCCATTTATGCTGAT 59.281 45.455 1.29 0.00 36.11 2.90
2614 7607 2.821969 GGCCTACCCATTTATGCTGATG 59.178 50.000 0.00 0.00 0.00 3.07
2615 7608 3.490348 GCCTACCCATTTATGCTGATGT 58.510 45.455 0.00 0.00 0.00 3.06
2616 7609 3.254166 GCCTACCCATTTATGCTGATGTG 59.746 47.826 0.00 0.00 0.00 3.21
2617 7610 3.822735 CCTACCCATTTATGCTGATGTGG 59.177 47.826 0.00 0.00 0.00 4.17
2618 7611 2.034124 ACCCATTTATGCTGATGTGGC 58.966 47.619 0.00 0.00 0.00 5.01
2619 7612 1.342174 CCCATTTATGCTGATGTGGCC 59.658 52.381 0.00 0.00 0.00 5.36
2620 7613 1.001048 CCATTTATGCTGATGTGGCCG 60.001 52.381 0.00 0.00 0.00 6.13
2621 7614 1.948834 CATTTATGCTGATGTGGCCGA 59.051 47.619 0.00 0.00 0.00 5.54
2622 7615 2.121291 TTTATGCTGATGTGGCCGAA 57.879 45.000 0.00 0.00 0.00 4.30
2623 7616 2.121291 TTATGCTGATGTGGCCGAAA 57.879 45.000 0.00 0.00 0.00 3.46
2624 7617 1.378531 TATGCTGATGTGGCCGAAAC 58.621 50.000 0.00 0.00 0.00 2.78
2625 7618 0.322816 ATGCTGATGTGGCCGAAACT 60.323 50.000 0.00 0.00 0.00 2.66
2626 7619 0.323302 TGCTGATGTGGCCGAAACTA 59.677 50.000 0.00 0.00 0.00 2.24
2627 7620 1.065491 TGCTGATGTGGCCGAAACTAT 60.065 47.619 0.00 0.00 0.00 2.12
2628 7621 1.331756 GCTGATGTGGCCGAAACTATG 59.668 52.381 0.00 0.00 0.00 2.23
2629 7622 2.905075 CTGATGTGGCCGAAACTATGA 58.095 47.619 0.00 0.00 0.00 2.15
2630 7623 3.270027 CTGATGTGGCCGAAACTATGAA 58.730 45.455 0.00 0.00 0.00 2.57
2631 7624 3.879295 CTGATGTGGCCGAAACTATGAAT 59.121 43.478 0.00 0.00 0.00 2.57
2632 7625 4.269183 TGATGTGGCCGAAACTATGAATT 58.731 39.130 0.00 0.00 0.00 2.17
2633 7626 5.432645 TGATGTGGCCGAAACTATGAATTA 58.567 37.500 0.00 0.00 0.00 1.40
2634 7627 5.883115 TGATGTGGCCGAAACTATGAATTAA 59.117 36.000 0.00 0.00 0.00 1.40
2635 7628 6.375736 TGATGTGGCCGAAACTATGAATTAAA 59.624 34.615 0.00 0.00 0.00 1.52
2636 7629 5.945155 TGTGGCCGAAACTATGAATTAAAC 58.055 37.500 0.00 0.00 0.00 2.01
2637 7630 5.473846 TGTGGCCGAAACTATGAATTAAACA 59.526 36.000 0.00 0.00 0.00 2.83
2638 7631 6.151985 TGTGGCCGAAACTATGAATTAAACAT 59.848 34.615 0.00 4.42 0.00 2.71
2639 7632 7.337184 TGTGGCCGAAACTATGAATTAAACATA 59.663 33.333 0.00 5.87 0.00 2.29
2640 7633 8.185505 GTGGCCGAAACTATGAATTAAACATAA 58.814 33.333 0.00 0.00 31.26 1.90
2641 7634 8.908903 TGGCCGAAACTATGAATTAAACATAAT 58.091 29.630 0.00 0.00 31.26 1.28
2642 7635 9.744468 GGCCGAAACTATGAATTAAACATAATT 57.256 29.630 0.00 0.00 32.81 1.40
2660 7653 8.276252 ACATAATTGTATATAAATGACCGGCC 57.724 34.615 0.00 0.00 33.16 6.13
2661 7654 7.885922 ACATAATTGTATATAAATGACCGGCCA 59.114 33.333 0.00 0.00 33.16 5.36
2662 7655 8.735315 CATAATTGTATATAAATGACCGGCCAA 58.265 33.333 0.00 0.00 0.00 4.52
2663 7656 7.589958 AATTGTATATAAATGACCGGCCAAA 57.410 32.000 0.00 0.00 0.00 3.28
2664 7657 6.380095 TTGTATATAAATGACCGGCCAAAC 57.620 37.500 0.00 0.00 0.00 2.93
2665 7658 4.512198 TGTATATAAATGACCGGCCAAACG 59.488 41.667 0.00 0.00 0.00 3.60
2666 7659 1.828979 ATAAATGACCGGCCAAACGT 58.171 45.000 0.00 0.00 0.00 3.99
2667 7660 1.158434 TAAATGACCGGCCAAACGTC 58.842 50.000 0.00 2.73 0.00 4.34
2668 7661 1.847890 AAATGACCGGCCAAACGTCG 61.848 55.000 0.00 0.00 0.00 5.12
2675 7668 2.050442 GCCAAACGTCGGCCAAAG 60.050 61.111 16.24 0.00 44.22 2.77
2676 7669 2.841160 GCCAAACGTCGGCCAAAGT 61.841 57.895 16.24 0.00 44.22 2.66
2677 7670 1.281656 CCAAACGTCGGCCAAAGTC 59.718 57.895 2.24 0.00 0.00 3.01
2678 7671 1.281656 CAAACGTCGGCCAAAGTCC 59.718 57.895 2.24 0.00 0.00 3.85
2679 7672 1.153127 AAACGTCGGCCAAAGTCCA 60.153 52.632 2.24 0.00 0.00 4.02
2680 7673 1.441732 AAACGTCGGCCAAAGTCCAC 61.442 55.000 2.24 0.00 0.00 4.02
2681 7674 2.030562 CGTCGGCCAAAGTCCACT 59.969 61.111 2.24 0.00 0.00 4.00
2682 7675 1.597027 CGTCGGCCAAAGTCCACTT 60.597 57.895 2.24 0.00 37.91 3.16
2683 7676 0.320073 CGTCGGCCAAAGTCCACTTA 60.320 55.000 2.24 0.00 34.61 2.24
2684 7677 1.439679 GTCGGCCAAAGTCCACTTAG 58.560 55.000 2.24 0.00 34.61 2.18
2685 7678 1.001633 GTCGGCCAAAGTCCACTTAGA 59.998 52.381 2.24 0.00 34.61 2.10
2686 7679 1.001633 TCGGCCAAAGTCCACTTAGAC 59.998 52.381 2.24 0.00 34.61 2.59
2687 7680 1.270625 CGGCCAAAGTCCACTTAGACA 60.271 52.381 2.24 0.00 39.34 3.41
2688 7681 2.615493 CGGCCAAAGTCCACTTAGACAT 60.615 50.000 2.24 0.00 39.34 3.06
2689 7682 3.369052 CGGCCAAAGTCCACTTAGACATA 60.369 47.826 2.24 0.00 39.34 2.29
2690 7683 4.585879 GGCCAAAGTCCACTTAGACATAA 58.414 43.478 0.00 0.00 39.34 1.90
2691 7684 5.007682 GGCCAAAGTCCACTTAGACATAAA 58.992 41.667 0.00 0.00 39.34 1.40
2692 7685 5.652452 GGCCAAAGTCCACTTAGACATAAAT 59.348 40.000 0.00 0.00 39.34 1.40
2693 7686 6.826741 GGCCAAAGTCCACTTAGACATAAATA 59.173 38.462 0.00 0.00 39.34 1.40
2694 7687 7.012421 GGCCAAAGTCCACTTAGACATAAATAG 59.988 40.741 0.00 0.00 39.34 1.73
2695 7688 7.769044 GCCAAAGTCCACTTAGACATAAATAGA 59.231 37.037 0.00 0.00 39.34 1.98
2696 7689 9.667107 CCAAAGTCCACTTAGACATAAATAGAA 57.333 33.333 0.00 0.00 39.34 2.10
2719 7712 8.141909 AGAAAATTAAAAACTCTTAGTGCCACC 58.858 33.333 0.00 0.00 0.00 4.61
2720 7713 5.622770 ATTAAAAACTCTTAGTGCCACCG 57.377 39.130 0.00 0.00 0.00 4.94
2721 7714 1.235724 AAAACTCTTAGTGCCACCGC 58.764 50.000 0.00 0.00 0.00 5.68
2722 7715 0.949105 AAACTCTTAGTGCCACCGCG 60.949 55.000 0.00 0.00 38.08 6.46
2723 7716 3.188786 CTCTTAGTGCCACCGCGC 61.189 66.667 0.00 0.00 46.29 6.86
2739 7732 3.443045 GCTTGGTGCACCGGGATG 61.443 66.667 30.07 17.94 42.31 3.51
2740 7733 2.034066 CTTGGTGCACCGGGATGT 59.966 61.111 30.07 0.00 39.43 3.06
2741 7734 2.282110 TTGGTGCACCGGGATGTG 60.282 61.111 30.07 0.00 39.43 3.21
2747 7740 3.817787 CACCGGGATGTGCAGATG 58.182 61.111 6.32 0.00 0.00 2.90
2748 7741 2.124570 ACCGGGATGTGCAGATGC 60.125 61.111 6.32 6.82 42.50 3.91
2749 7742 2.191375 CCGGGATGTGCAGATGCT 59.809 61.111 14.94 0.00 42.66 3.79
2750 7743 2.184830 CCGGGATGTGCAGATGCTG 61.185 63.158 16.20 16.20 42.66 4.41
2759 7752 4.220413 CAGATGCTGCCACCTGAG 57.780 61.111 0.00 0.00 0.00 3.35
2760 7753 2.113433 CAGATGCTGCCACCTGAGC 61.113 63.158 0.00 0.00 35.65 4.26
2761 7754 3.200593 GATGCTGCCACCTGAGCG 61.201 66.667 0.00 0.00 38.09 5.03
2762 7755 4.790962 ATGCTGCCACCTGAGCGG 62.791 66.667 0.00 0.00 38.09 5.52
2790 7783 3.535962 GCAGCGGAGGAGGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
2791 7784 2.837291 CAGCGGAGGAGGAGGAGG 60.837 72.222 0.00 0.00 0.00 4.30
2792 7785 3.024356 AGCGGAGGAGGAGGAGGA 61.024 66.667 0.00 0.00 0.00 3.71
2793 7786 2.520741 GCGGAGGAGGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
2794 7787 2.197324 CGGAGGAGGAGGAGGAGG 59.803 72.222 0.00 0.00 0.00 4.30
2795 7788 2.612251 GGAGGAGGAGGAGGAGGG 59.388 72.222 0.00 0.00 0.00 4.30
2796 7789 2.612251 GAGGAGGAGGAGGAGGGG 59.388 72.222 0.00 0.00 0.00 4.79
2797 7790 3.767044 GAGGAGGAGGAGGAGGGGC 62.767 73.684 0.00 0.00 0.00 5.80
2798 7791 4.095400 GGAGGAGGAGGAGGGGCA 62.095 72.222 0.00 0.00 0.00 5.36
2799 7792 2.766229 GAGGAGGAGGAGGGGCAC 60.766 72.222 0.00 0.00 0.00 5.01
2800 7793 3.615811 AGGAGGAGGAGGGGCACA 61.616 66.667 0.00 0.00 0.00 4.57
2801 7794 3.086600 GGAGGAGGAGGGGCACAG 61.087 72.222 0.00 0.00 0.00 3.66
2802 7795 3.086600 GAGGAGGAGGGGCACAGG 61.087 72.222 0.00 0.00 0.00 4.00
2803 7796 3.615811 AGGAGGAGGGGCACAGGA 61.616 66.667 0.00 0.00 0.00 3.86
2804 7797 3.086600 GGAGGAGGGGCACAGGAG 61.087 72.222 0.00 0.00 0.00 3.69
2805 7798 3.086600 GAGGAGGGGCACAGGAGG 61.087 72.222 0.00 0.00 0.00 4.30
2806 7799 3.615811 AGGAGGGGCACAGGAGGA 61.616 66.667 0.00 0.00 0.00 3.71
2807 7800 2.367512 GGAGGGGCACAGGAGGAT 60.368 66.667 0.00 0.00 0.00 3.24
2808 7801 2.750657 GGAGGGGCACAGGAGGATG 61.751 68.421 0.00 0.00 0.00 3.51
2809 7802 1.690633 GAGGGGCACAGGAGGATGA 60.691 63.158 0.00 0.00 0.00 2.92
2810 7803 1.692042 AGGGGCACAGGAGGATGAG 60.692 63.158 0.00 0.00 0.00 2.90
2811 7804 2.750657 GGGGCACAGGAGGATGAGG 61.751 68.421 0.00 0.00 0.00 3.86
2812 7805 2.191641 GGCACAGGAGGATGAGGC 59.808 66.667 0.00 0.00 0.00 4.70
2813 7806 2.202987 GCACAGGAGGATGAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
2814 7807 2.202987 CACAGGAGGATGAGGCGC 60.203 66.667 0.00 0.00 0.00 6.53
2815 7808 3.474570 ACAGGAGGATGAGGCGCC 61.475 66.667 21.89 21.89 0.00 6.53
2816 7809 4.598894 CAGGAGGATGAGGCGCCG 62.599 72.222 23.20 0.00 0.00 6.46
2853 7846 2.202932 CGCTGCCGGAGCTATTGT 60.203 61.111 19.30 0.00 46.64 2.71
2854 7847 2.240500 CGCTGCCGGAGCTATTGTC 61.241 63.158 19.30 0.00 46.64 3.18
2855 7848 2.240500 GCTGCCGGAGCTATTGTCG 61.241 63.158 5.05 0.00 45.21 4.35
2856 7849 1.437573 CTGCCGGAGCTATTGTCGA 59.562 57.895 5.05 0.00 40.80 4.20
2857 7850 0.179111 CTGCCGGAGCTATTGTCGAA 60.179 55.000 5.05 0.00 40.80 3.71
2858 7851 0.179111 TGCCGGAGCTATTGTCGAAG 60.179 55.000 5.05 0.00 40.80 3.79
2859 7852 0.102481 GCCGGAGCTATTGTCGAAGA 59.898 55.000 5.05 0.00 35.50 2.87
2860 7853 1.866063 GCCGGAGCTATTGTCGAAGAG 60.866 57.143 5.05 0.00 33.64 2.85
2861 7854 1.482278 CGGAGCTATTGTCGAAGAGC 58.518 55.000 0.00 0.00 45.20 4.09
2862 7855 1.859383 GGAGCTATTGTCGAAGAGCC 58.141 55.000 0.24 0.00 45.87 4.70
2863 7856 1.539280 GGAGCTATTGTCGAAGAGCCC 60.539 57.143 0.24 0.00 45.87 5.19
2864 7857 0.466124 AGCTATTGTCGAAGAGCCCC 59.534 55.000 0.24 0.00 45.87 5.80
2865 7858 0.178068 GCTATTGTCGAAGAGCCCCA 59.822 55.000 0.00 0.00 40.01 4.96
2866 7859 1.202698 GCTATTGTCGAAGAGCCCCAT 60.203 52.381 0.00 0.00 40.01 4.00
2867 7860 2.487934 CTATTGTCGAAGAGCCCCATG 58.512 52.381 0.00 0.00 36.95 3.66
2868 7861 0.107017 ATTGTCGAAGAGCCCCATGG 60.107 55.000 4.14 4.14 36.95 3.66
2878 7871 4.684623 CCCCATGGCTAGGGTTTG 57.315 61.111 6.09 0.00 45.28 2.93
2879 7872 1.076044 CCCCATGGCTAGGGTTTGG 60.076 63.158 6.09 0.00 45.28 3.28
2880 7873 1.076044 CCCATGGCTAGGGTTTGGG 60.076 63.158 6.09 0.00 41.61 4.12
2881 7874 1.697297 CCATGGCTAGGGTTTGGGT 59.303 57.895 0.00 0.00 0.00 4.51
2882 7875 0.041090 CCATGGCTAGGGTTTGGGTT 59.959 55.000 0.00 0.00 0.00 4.11
2883 7876 1.185315 CATGGCTAGGGTTTGGGTTG 58.815 55.000 0.00 0.00 0.00 3.77
2884 7877 0.783850 ATGGCTAGGGTTTGGGTTGT 59.216 50.000 0.00 0.00 0.00 3.32
2885 7878 0.111639 TGGCTAGGGTTTGGGTTGTC 59.888 55.000 0.00 0.00 0.00 3.18
2886 7879 0.958876 GGCTAGGGTTTGGGTTGTCG 60.959 60.000 0.00 0.00 0.00 4.35
2887 7880 1.583495 GCTAGGGTTTGGGTTGTCGC 61.583 60.000 0.00 0.00 0.00 5.19
2888 7881 0.958876 CTAGGGTTTGGGTTGTCGCC 60.959 60.000 0.00 0.00 0.00 5.54
2889 7882 1.706995 TAGGGTTTGGGTTGTCGCCA 61.707 55.000 0.00 0.00 0.00 5.69
2890 7883 2.561037 GGGTTTGGGTTGTCGCCAG 61.561 63.158 0.00 0.00 0.00 4.85
2891 7884 2.335011 GTTTGGGTTGTCGCCAGC 59.665 61.111 0.00 0.00 0.00 4.85
2892 7885 3.283684 TTTGGGTTGTCGCCAGCG 61.284 61.111 5.50 5.50 41.35 5.18
2893 7886 3.758973 TTTGGGTTGTCGCCAGCGA 62.759 57.895 11.27 11.27 46.87 4.93
2901 7894 4.742201 TCGCCAGCGAGGAAGCAC 62.742 66.667 11.27 0.00 44.01 4.40
2903 7896 4.742201 GCCAGCGAGGAAGCACGA 62.742 66.667 2.12 0.00 41.22 4.35
2904 7897 2.048222 CCAGCGAGGAAGCACGAA 60.048 61.111 0.00 0.00 41.22 3.85
2905 7898 2.097038 CCAGCGAGGAAGCACGAAG 61.097 63.158 0.00 0.00 41.22 3.79
2906 7899 2.097038 CAGCGAGGAAGCACGAAGG 61.097 63.158 0.00 0.00 40.15 3.46
2907 7900 2.261671 GCGAGGAAGCACGAAGGA 59.738 61.111 0.00 0.00 37.05 3.36
2908 7901 1.807573 GCGAGGAAGCACGAAGGAG 60.808 63.158 0.00 0.00 37.05 3.69
2909 7902 1.153745 CGAGGAAGCACGAAGGAGG 60.154 63.158 0.00 0.00 0.00 4.30
2910 7903 1.878656 CGAGGAAGCACGAAGGAGGT 61.879 60.000 0.00 0.00 0.00 3.85
2911 7904 0.390472 GAGGAAGCACGAAGGAGGTG 60.390 60.000 0.00 0.00 38.42 4.00
2912 7905 1.376037 GGAAGCACGAAGGAGGTGG 60.376 63.158 0.00 0.00 35.94 4.61
2913 7906 2.032681 AAGCACGAAGGAGGTGGC 59.967 61.111 0.00 0.00 35.94 5.01
2914 7907 3.883744 AAGCACGAAGGAGGTGGCG 62.884 63.158 0.00 0.00 35.94 5.69
2916 7909 4.760047 CACGAAGGAGGTGGCGGG 62.760 72.222 0.00 0.00 0.00 6.13
2924 7917 4.499116 AGGTGGCGGGGGCTAGAT 62.499 66.667 0.00 0.00 0.00 1.98
2925 7918 4.256180 GGTGGCGGGGGCTAGATG 62.256 72.222 0.00 0.00 0.00 2.90
2926 7919 3.480133 GTGGCGGGGGCTAGATGT 61.480 66.667 0.00 0.00 0.00 3.06
2927 7920 3.479203 TGGCGGGGGCTAGATGTG 61.479 66.667 0.00 0.00 0.00 3.21
2928 7921 4.256180 GGCGGGGGCTAGATGTGG 62.256 72.222 0.00 0.00 0.00 4.17
2929 7922 3.161450 GCGGGGGCTAGATGTGGA 61.161 66.667 0.00 0.00 0.00 4.02
2930 7923 2.822399 CGGGGGCTAGATGTGGAC 59.178 66.667 0.00 0.00 0.00 4.02
2931 7924 2.822399 GGGGGCTAGATGTGGACG 59.178 66.667 0.00 0.00 0.00 4.79
2932 7925 2.808206 GGGGGCTAGATGTGGACGG 61.808 68.421 0.00 0.00 0.00 4.79
2933 7926 1.760875 GGGGCTAGATGTGGACGGA 60.761 63.158 0.00 0.00 0.00 4.69
2934 7927 1.335132 GGGGCTAGATGTGGACGGAA 61.335 60.000 0.00 0.00 0.00 4.30
2935 7928 0.105039 GGGCTAGATGTGGACGGAAG 59.895 60.000 0.00 0.00 0.00 3.46
2946 7939 3.805928 ACGGAAGTGGATGAGCCA 58.194 55.556 0.00 0.00 46.97 4.75
2953 7946 3.338250 TGGATGAGCCACCACCCC 61.338 66.667 0.00 0.00 43.33 4.95
3275 8268 3.393360 ACTGGCTGACTAGTGGGC 58.607 61.111 0.00 6.07 0.00 5.36
3276 8269 1.229336 ACTGGCTGACTAGTGGGCT 60.229 57.895 0.00 0.00 0.00 5.19
3277 8270 1.261238 ACTGGCTGACTAGTGGGCTC 61.261 60.000 0.00 0.00 0.00 4.70
3278 8271 1.965754 CTGGCTGACTAGTGGGCTCC 61.966 65.000 0.00 0.00 0.00 4.70
3279 8272 2.496817 GCTGACTAGTGGGCTCCG 59.503 66.667 0.00 0.00 0.00 4.63
3280 8273 2.496817 CTGACTAGTGGGCTCCGC 59.503 66.667 0.00 0.00 0.00 5.54
3281 8274 2.283604 TGACTAGTGGGCTCCGCA 60.284 61.111 0.00 0.00 36.32 5.69
3282 8275 1.680522 CTGACTAGTGGGCTCCGCAT 61.681 60.000 0.00 0.00 36.32 4.73
3283 8276 1.068250 GACTAGTGGGCTCCGCATC 59.932 63.158 0.00 0.00 36.32 3.91
3284 8277 2.028190 CTAGTGGGCTCCGCATCG 59.972 66.667 7.41 0.00 36.32 3.84
3294 8287 4.429212 CCGCATCGGTGGTCGTCA 62.429 66.667 0.00 0.00 42.73 4.35
3295 8288 2.202743 CGCATCGGTGGTCGTCAT 60.203 61.111 0.00 0.00 40.32 3.06
3296 8289 1.065109 CGCATCGGTGGTCGTCATA 59.935 57.895 0.00 0.00 40.32 2.15
3297 8290 0.526739 CGCATCGGTGGTCGTCATAA 60.527 55.000 0.00 0.00 40.32 1.90
3298 8291 1.647346 GCATCGGTGGTCGTCATAAA 58.353 50.000 0.00 0.00 40.32 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.012486 GCCGTGAAAGAACCGATCGT 61.012 55.000 15.09 0.00 0.00 3.73
10 11 0.736325 AGCCGTGAAAGAACCGATCG 60.736 55.000 8.51 8.51 0.00 3.69
105 4110 1.153168 CCACTTTCCGCGATCCCAT 60.153 57.895 8.23 0.00 0.00 4.00
236 4245 6.174760 TCAATAAGGTAACGGCACAATAAGT 58.825 36.000 0.00 0.00 46.39 2.24
246 4255 5.354234 AGCAATGTCTTCAATAAGGTAACGG 59.646 40.000 0.00 0.00 46.39 4.44
256 4265 6.228258 AGCAAATTCAAGCAATGTCTTCAAT 58.772 32.000 0.00 0.00 0.00 2.57
263 4272 4.060205 GTCCAAGCAAATTCAAGCAATGT 58.940 39.130 0.00 0.00 0.00 2.71
271 4280 6.169094 TGAAAAACAAGTCCAAGCAAATTCA 58.831 32.000 0.00 0.00 0.00 2.57
291 4300 7.380536 CCAGATCATTGGTTTTCATCTTGAAA 58.619 34.615 0.00 0.00 43.84 2.69
408 5108 3.686241 CACAATCACTTGACATCATCGGT 59.314 43.478 0.00 0.00 36.20 4.69
409 5109 3.064408 CCACAATCACTTGACATCATCGG 59.936 47.826 0.00 0.00 36.20 4.18
410 5110 3.934579 TCCACAATCACTTGACATCATCG 59.065 43.478 0.00 0.00 36.20 3.84
411 5111 5.732528 GCATCCACAATCACTTGACATCATC 60.733 44.000 0.00 0.00 36.20 2.92
430 5130 1.750399 AACAGCCACATCCGCATCC 60.750 57.895 0.00 0.00 0.00 3.51
440 5140 6.494893 TCAACAATCTATAACAACAGCCAC 57.505 37.500 0.00 0.00 0.00 5.01
507 5209 5.057149 AGTCAAACAAGACGAAAGCTATGT 58.943 37.500 0.00 0.00 43.24 2.29
517 5219 4.795970 ACTAGCAAAGTCAAACAAGACG 57.204 40.909 0.00 0.00 43.24 4.18
548 5250 9.729023 CAACTCTCACACACACAAATAAAAATA 57.271 29.630 0.00 0.00 0.00 1.40
550 5252 7.032580 CCAACTCTCACACACACAAATAAAAA 58.967 34.615 0.00 0.00 0.00 1.94
557 5259 2.746904 CAACCAACTCTCACACACACAA 59.253 45.455 0.00 0.00 0.00 3.33
580 5282 8.951614 TCTACTACATAAATACTAGGGTGCAT 57.048 34.615 0.00 0.00 0.00 3.96
585 5287 6.095160 CGGCCTCTACTACATAAATACTAGGG 59.905 46.154 0.00 0.00 0.00 3.53
593 5295 2.696707 CACCCGGCCTCTACTACATAAA 59.303 50.000 0.00 0.00 0.00 1.40
595 5297 1.216175 ACACCCGGCCTCTACTACATA 59.784 52.381 0.00 0.00 0.00 2.29
596 5298 0.032416 ACACCCGGCCTCTACTACAT 60.032 55.000 0.00 0.00 0.00 2.29
597 5299 0.968901 CACACCCGGCCTCTACTACA 60.969 60.000 0.00 0.00 0.00 2.74
598 5300 0.969409 ACACACCCGGCCTCTACTAC 60.969 60.000 0.00 0.00 0.00 2.73
599 5301 0.251922 AACACACCCGGCCTCTACTA 60.252 55.000 0.00 0.00 0.00 1.82
600 5302 1.535687 AACACACCCGGCCTCTACT 60.536 57.895 0.00 0.00 0.00 2.57
601 5303 1.375523 CAACACACCCGGCCTCTAC 60.376 63.158 0.00 0.00 0.00 2.59
602 5304 3.065306 CAACACACCCGGCCTCTA 58.935 61.111 0.00 0.00 0.00 2.43
636 5340 3.252944 TCACAAAATGAAGCATCAAGCGA 59.747 39.130 0.00 0.00 39.72 4.93
638 5342 7.766219 ATTATCACAAAATGAAGCATCAAGC 57.234 32.000 0.00 0.00 41.93 4.01
711 5415 9.878599 GGAAATTATACAAACCATCGACTATTG 57.121 33.333 0.00 0.00 0.00 1.90
715 5419 9.675464 TTTAGGAAATTATACAAACCATCGACT 57.325 29.630 0.00 0.00 0.00 4.18
745 5449 2.355444 TGGTCCGTTCCGTTTCTTTTTC 59.645 45.455 0.00 0.00 0.00 2.29
746 5450 2.356695 CTGGTCCGTTCCGTTTCTTTTT 59.643 45.455 0.00 0.00 0.00 1.94
747 5451 1.944709 CTGGTCCGTTCCGTTTCTTTT 59.055 47.619 0.00 0.00 0.00 2.27
800 5504 4.591202 TCGAGTTCATTACGAATACGGAC 58.409 43.478 0.00 0.00 44.46 4.79
806 5510 5.821516 AGAGACTCGAGTTCATTACGAAT 57.178 39.130 21.08 0.00 35.63 3.34
838 5542 1.097232 TTCTCGATCCGGCGTTTAGA 58.903 50.000 6.01 0.00 0.00 2.10
839 5543 2.135664 ATTCTCGATCCGGCGTTTAG 57.864 50.000 6.01 0.00 0.00 1.85
840 5544 2.466846 GAATTCTCGATCCGGCGTTTA 58.533 47.619 6.01 0.00 0.00 2.01
841 5545 1.287425 GAATTCTCGATCCGGCGTTT 58.713 50.000 6.01 0.00 0.00 3.60
867 5571 1.226746 GCTGCATTATGTACCCGGTC 58.773 55.000 0.00 0.00 0.00 4.79
937 5642 2.761195 GGAAATCGTTCTGGCCGGC 61.761 63.158 21.18 21.18 33.92 6.13
998 5703 4.847367 CCCCTTCCCCTGCCATGC 62.847 72.222 0.00 0.00 0.00 4.06
1245 5962 0.396139 AGTATTCCGGCGTCCTGGTA 60.396 55.000 6.01 0.00 0.00 3.25
1423 6320 0.735978 TGTCGTGTCATCATCGGCAC 60.736 55.000 0.00 0.00 34.37 5.01
1429 6326 1.153568 CCGGCTGTCGTGTCATCAT 60.154 57.895 0.00 0.00 37.11 2.45
1430 6327 2.261361 CCGGCTGTCGTGTCATCA 59.739 61.111 0.00 0.00 37.11 3.07
1479 6418 2.594303 TTGAACGCCACCTGCTGG 60.594 61.111 8.29 8.29 44.08 4.85
1541 6480 2.030213 GTCTGATTCTGAGCGTGATTGC 59.970 50.000 0.00 0.00 0.00 3.56
1908 6898 3.941836 GCGAACGCCATAGCCTGC 61.942 66.667 8.03 0.00 34.57 4.85
1909 6899 3.630148 CGCGAACGCCATAGCCTG 61.630 66.667 13.40 0.00 37.98 4.85
2039 7032 4.962836 CCCCCGCCTGATGATGGC 62.963 72.222 0.00 0.00 46.42 4.40
2079 7072 0.372679 TGCTAGCGTAGAAGTCGTCG 59.627 55.000 10.77 0.00 0.00 5.12
2174 7167 3.793144 GCAAAGCCTCTGCCGTCG 61.793 66.667 0.00 0.00 38.69 5.12
2315 7308 1.508088 GACTCAAATTGGCCAGCGG 59.492 57.895 5.11 0.00 0.00 5.52
2332 7325 2.429610 GCTAGTAATCCCCTGTTCACGA 59.570 50.000 0.00 0.00 0.00 4.35
2333 7326 2.167693 TGCTAGTAATCCCCTGTTCACG 59.832 50.000 0.00 0.00 0.00 4.35
2334 7327 3.798202 CTGCTAGTAATCCCCTGTTCAC 58.202 50.000 0.00 0.00 0.00 3.18
2335 7328 2.170607 GCTGCTAGTAATCCCCTGTTCA 59.829 50.000 0.00 0.00 0.00 3.18
2336 7329 2.803492 CGCTGCTAGTAATCCCCTGTTC 60.803 54.545 0.00 0.00 0.00 3.18
2337 7330 1.139058 CGCTGCTAGTAATCCCCTGTT 59.861 52.381 0.00 0.00 0.00 3.16
2338 7331 0.753262 CGCTGCTAGTAATCCCCTGT 59.247 55.000 0.00 0.00 0.00 4.00
2339 7332 0.034059 CCGCTGCTAGTAATCCCCTG 59.966 60.000 0.00 0.00 0.00 4.45
2340 7333 0.105658 TCCGCTGCTAGTAATCCCCT 60.106 55.000 0.00 0.00 0.00 4.79
2341 7334 0.318762 CTCCGCTGCTAGTAATCCCC 59.681 60.000 0.00 0.00 0.00 4.81
2342 7335 0.319986 GCTCCGCTGCTAGTAATCCC 60.320 60.000 0.00 0.00 0.00 3.85
2343 7336 0.664767 CGCTCCGCTGCTAGTAATCC 60.665 60.000 0.00 0.00 0.00 3.01
2344 7337 0.664767 CCGCTCCGCTGCTAGTAATC 60.665 60.000 0.00 0.00 0.00 1.75
2345 7338 1.364171 CCGCTCCGCTGCTAGTAAT 59.636 57.895 0.00 0.00 0.00 1.89
2346 7339 2.050350 ACCGCTCCGCTGCTAGTAA 61.050 57.895 0.00 0.00 0.00 2.24
2347 7340 2.439701 ACCGCTCCGCTGCTAGTA 60.440 61.111 0.00 0.00 0.00 1.82
2348 7341 4.135153 CACCGCTCCGCTGCTAGT 62.135 66.667 0.00 0.00 0.00 2.57
2349 7342 4.880537 CCACCGCTCCGCTGCTAG 62.881 72.222 0.00 0.00 0.00 3.42
2353 7346 4.880537 CTAGCCACCGCTCCGCTG 62.881 72.222 0.00 0.00 43.95 5.18
2373 7366 0.242017 CTAGCCTGTGCAAAACTGCC 59.758 55.000 0.00 0.00 41.13 4.85
2424 7417 7.115947 AGCACAAACGAGATGTTAACTAGTAAC 59.884 37.037 7.22 2.25 40.84 2.50
2425 7418 7.149973 AGCACAAACGAGATGTTAACTAGTAA 58.850 34.615 7.22 0.00 40.84 2.24
2426 7419 6.684686 AGCACAAACGAGATGTTAACTAGTA 58.315 36.000 7.22 0.00 40.84 1.82
2427 7420 5.539048 AGCACAAACGAGATGTTAACTAGT 58.461 37.500 7.22 0.00 40.84 2.57
2428 7421 6.467723 AAGCACAAACGAGATGTTAACTAG 57.532 37.500 7.22 0.00 40.84 2.57
2429 7422 6.480651 TGAAAGCACAAACGAGATGTTAACTA 59.519 34.615 7.22 0.00 40.84 2.24
2430 7423 5.295787 TGAAAGCACAAACGAGATGTTAACT 59.704 36.000 7.22 0.00 40.84 2.24
2431 7424 5.507077 TGAAAGCACAAACGAGATGTTAAC 58.493 37.500 0.00 0.00 40.84 2.01
2432 7425 5.743026 TGAAAGCACAAACGAGATGTTAA 57.257 34.783 0.00 0.00 40.84 2.01
2433 7426 5.065346 TGTTGAAAGCACAAACGAGATGTTA 59.935 36.000 0.00 0.00 40.84 2.41
2434 7427 4.142491 TGTTGAAAGCACAAACGAGATGTT 60.142 37.500 0.00 0.00 44.59 2.71
2435 7428 3.376859 TGTTGAAAGCACAAACGAGATGT 59.623 39.130 0.00 0.00 0.00 3.06
2436 7429 3.951306 TGTTGAAAGCACAAACGAGATG 58.049 40.909 0.00 0.00 0.00 2.90
2437 7430 4.836125 ATGTTGAAAGCACAAACGAGAT 57.164 36.364 0.00 0.00 0.00 2.75
2438 7431 4.630894 AATGTTGAAAGCACAAACGAGA 57.369 36.364 0.00 0.00 0.00 4.04
2439 7432 5.288232 TCAAAATGTTGAAAGCACAAACGAG 59.712 36.000 0.00 0.00 40.87 4.18
2440 7433 5.164233 TCAAAATGTTGAAAGCACAAACGA 58.836 33.333 0.00 0.00 40.87 3.85
2441 7434 5.447478 TCAAAATGTTGAAAGCACAAACG 57.553 34.783 0.00 0.00 40.87 3.60
2442 7435 8.130307 AGTATCAAAATGTTGAAAGCACAAAC 57.870 30.769 1.55 0.00 46.66 2.93
2443 7436 8.715191 AAGTATCAAAATGTTGAAAGCACAAA 57.285 26.923 1.55 0.00 46.66 2.83
2444 7437 9.462174 CTAAGTATCAAAATGTTGAAAGCACAA 57.538 29.630 1.55 0.00 46.66 3.33
2445 7438 8.845227 TCTAAGTATCAAAATGTTGAAAGCACA 58.155 29.630 1.55 0.00 46.66 4.57
2446 7439 9.334693 CTCTAAGTATCAAAATGTTGAAAGCAC 57.665 33.333 1.55 0.00 46.66 4.40
2447 7440 8.023128 GCTCTAAGTATCAAAATGTTGAAAGCA 58.977 33.333 1.55 0.00 46.66 3.91
2448 7441 8.023128 TGCTCTAAGTATCAAAATGTTGAAAGC 58.977 33.333 1.55 4.55 46.66 3.51
2449 7442 9.897744 TTGCTCTAAGTATCAAAATGTTGAAAG 57.102 29.630 1.55 0.00 46.66 2.62
2450 7443 9.677567 GTTGCTCTAAGTATCAAAATGTTGAAA 57.322 29.630 1.55 0.00 46.66 2.69
2451 7444 9.066892 AGTTGCTCTAAGTATCAAAATGTTGAA 57.933 29.630 1.55 0.00 46.66 2.69
2453 7446 7.965107 GGAGTTGCTCTAAGTATCAAAATGTTG 59.035 37.037 0.00 0.00 35.95 3.33
2454 7447 7.665559 TGGAGTTGCTCTAAGTATCAAAATGTT 59.334 33.333 0.00 0.00 0.00 2.71
2455 7448 7.168219 TGGAGTTGCTCTAAGTATCAAAATGT 58.832 34.615 0.00 0.00 0.00 2.71
2456 7449 7.615582 TGGAGTTGCTCTAAGTATCAAAATG 57.384 36.000 0.00 0.00 0.00 2.32
2457 7450 7.148407 CGTTGGAGTTGCTCTAAGTATCAAAAT 60.148 37.037 0.00 0.00 31.92 1.82
2458 7451 6.147164 CGTTGGAGTTGCTCTAAGTATCAAAA 59.853 38.462 0.00 0.00 31.92 2.44
2459 7452 5.637810 CGTTGGAGTTGCTCTAAGTATCAAA 59.362 40.000 0.00 0.00 31.92 2.69
2460 7453 5.168569 CGTTGGAGTTGCTCTAAGTATCAA 58.831 41.667 0.00 0.00 31.92 2.57
2461 7454 4.744570 CGTTGGAGTTGCTCTAAGTATCA 58.255 43.478 0.00 0.00 31.92 2.15
2462 7455 3.552294 GCGTTGGAGTTGCTCTAAGTATC 59.448 47.826 0.00 0.00 31.92 2.24
2463 7456 3.522553 GCGTTGGAGTTGCTCTAAGTAT 58.477 45.455 0.00 0.00 31.92 2.12
2464 7457 2.670229 CGCGTTGGAGTTGCTCTAAGTA 60.670 50.000 0.00 0.00 31.92 2.24
2465 7458 1.797025 GCGTTGGAGTTGCTCTAAGT 58.203 50.000 0.00 0.00 31.92 2.24
2466 7459 0.716108 CGCGTTGGAGTTGCTCTAAG 59.284 55.000 0.00 0.00 31.92 2.18
2467 7460 1.289109 GCGCGTTGGAGTTGCTCTAA 61.289 55.000 8.43 0.00 0.00 2.10
2468 7461 1.736645 GCGCGTTGGAGTTGCTCTA 60.737 57.895 8.43 0.00 0.00 2.43
2469 7462 3.044305 GCGCGTTGGAGTTGCTCT 61.044 61.111 8.43 0.00 0.00 4.09
2470 7463 4.090057 GGCGCGTTGGAGTTGCTC 62.090 66.667 8.43 0.00 0.00 4.26
2473 7466 4.072088 GTCGGCGCGTTGGAGTTG 62.072 66.667 8.43 0.00 0.00 3.16
2479 7472 4.676586 GTTTGGGTCGGCGCGTTG 62.677 66.667 8.43 0.00 0.00 4.10
2484 7477 4.973055 TGTCCGTTTGGGTCGGCG 62.973 66.667 0.00 0.00 46.49 6.46
2485 7478 3.351416 GTGTCCGTTTGGGTCGGC 61.351 66.667 0.00 0.00 46.49 5.54
2487 7480 3.708734 GCGTGTCCGTTTGGGTCG 61.709 66.667 0.00 0.00 37.00 4.79
2488 7481 3.708734 CGCGTGTCCGTTTGGGTC 61.709 66.667 0.00 0.00 37.00 4.46
2492 7485 4.287967 AACGCGCGTGTCCGTTTG 62.288 61.111 38.44 2.54 44.30 2.93
2493 7486 4.287967 CAACGCGCGTGTCCGTTT 62.288 61.111 38.44 16.72 44.30 3.60
2506 7499 1.203313 GGACGAAAAGCGGACAACG 59.797 57.895 0.00 0.00 46.49 4.10
2507 7500 1.203313 CGGACGAAAAGCGGACAAC 59.797 57.895 0.00 0.00 46.49 3.32
2508 7501 0.810823 AACGGACGAAAAGCGGACAA 60.811 50.000 0.00 0.00 46.49 3.18
2509 7502 0.810823 AAACGGACGAAAAGCGGACA 60.811 50.000 0.00 0.00 46.49 4.02
2510 7503 1.125566 CTAAACGGACGAAAAGCGGAC 59.874 52.381 0.00 0.00 46.49 4.79
2511 7504 1.421382 CTAAACGGACGAAAAGCGGA 58.579 50.000 0.00 0.00 46.49 5.54
2512 7505 0.441145 CCTAAACGGACGAAAAGCGG 59.559 55.000 0.00 0.00 46.49 5.52
2513 7506 1.125566 GACCTAAACGGACGAAAAGCG 59.874 52.381 0.00 0.00 40.52 4.68
2514 7507 2.869358 GACCTAAACGGACGAAAAGC 57.131 50.000 0.00 0.00 36.31 3.51
2524 7517 2.818274 GCCTGGCCGACCTAAACG 60.818 66.667 7.66 0.00 36.63 3.60
2525 7518 2.818274 CGCCTGGCCGACCTAAAC 60.818 66.667 14.12 0.00 36.63 2.01
2526 7519 4.090588 CCGCCTGGCCGACCTAAA 62.091 66.667 14.12 0.00 36.63 1.85
2546 7539 0.659123 ATGAAAAACCGAACGCGCAC 60.659 50.000 5.73 0.00 35.83 5.34
2547 7540 0.029567 AATGAAAAACCGAACGCGCA 59.970 45.000 5.73 0.00 35.83 6.09
2548 7541 1.125270 AAATGAAAAACCGAACGCGC 58.875 45.000 5.73 0.00 35.83 6.86
2549 7542 2.376956 TCAAATGAAAAACCGAACGCG 58.623 42.857 3.53 3.53 37.24 6.01
2550 7543 3.368495 ACTCAAATGAAAAACCGAACGC 58.632 40.909 0.00 0.00 0.00 4.84
2551 7544 3.657625 CGACTCAAATGAAAAACCGAACG 59.342 43.478 0.00 0.00 0.00 3.95
2552 7545 3.972502 CCGACTCAAATGAAAAACCGAAC 59.027 43.478 0.00 0.00 0.00 3.95
2553 7546 3.549221 GCCGACTCAAATGAAAAACCGAA 60.549 43.478 0.00 0.00 0.00 4.30
2554 7547 2.031508 GCCGACTCAAATGAAAAACCGA 60.032 45.455 0.00 0.00 0.00 4.69
2555 7548 2.287308 TGCCGACTCAAATGAAAAACCG 60.287 45.455 0.00 0.00 0.00 4.44
2556 7549 3.308530 CTGCCGACTCAAATGAAAAACC 58.691 45.455 0.00 0.00 0.00 3.27
2557 7550 3.243401 ACCTGCCGACTCAAATGAAAAAC 60.243 43.478 0.00 0.00 0.00 2.43
2558 7551 2.955660 ACCTGCCGACTCAAATGAAAAA 59.044 40.909 0.00 0.00 0.00 1.94
2559 7552 2.293122 CACCTGCCGACTCAAATGAAAA 59.707 45.455 0.00 0.00 0.00 2.29
2560 7553 1.879380 CACCTGCCGACTCAAATGAAA 59.121 47.619 0.00 0.00 0.00 2.69
2561 7554 1.522668 CACCTGCCGACTCAAATGAA 58.477 50.000 0.00 0.00 0.00 2.57
2562 7555 0.955428 GCACCTGCCGACTCAAATGA 60.955 55.000 0.00 0.00 34.31 2.57
2563 7556 1.503542 GCACCTGCCGACTCAAATG 59.496 57.895 0.00 0.00 34.31 2.32
2564 7557 2.034879 CGCACCTGCCGACTCAAAT 61.035 57.895 0.00 0.00 37.91 2.32
2565 7558 2.664851 CGCACCTGCCGACTCAAA 60.665 61.111 0.00 0.00 37.91 2.69
2583 7576 3.793888 GGTAGGCCTCCCGTTGGG 61.794 72.222 9.68 0.00 46.11 4.12
2584 7577 3.793888 GGGTAGGCCTCCCGTTGG 61.794 72.222 20.46 0.00 35.27 3.77
2589 7582 1.547901 GCATAAATGGGTAGGCCTCCC 60.548 57.143 25.56 25.56 44.81 4.30
2590 7583 1.425448 AGCATAAATGGGTAGGCCTCC 59.575 52.381 9.68 10.97 31.14 4.30
2591 7584 2.106511 TCAGCATAAATGGGTAGGCCTC 59.893 50.000 9.68 0.00 31.14 4.70
2592 7585 2.135189 TCAGCATAAATGGGTAGGCCT 58.865 47.619 11.78 11.78 31.14 5.19
2593 7586 2.656947 TCAGCATAAATGGGTAGGCC 57.343 50.000 0.00 0.00 31.14 5.19
2594 7587 3.254166 CACATCAGCATAAATGGGTAGGC 59.746 47.826 0.00 0.00 0.00 3.93
2595 7588 3.822735 CCACATCAGCATAAATGGGTAGG 59.177 47.826 0.00 0.00 0.00 3.18
2596 7589 3.254166 GCCACATCAGCATAAATGGGTAG 59.746 47.826 0.00 0.00 0.00 3.18
2597 7590 3.221771 GCCACATCAGCATAAATGGGTA 58.778 45.455 0.00 0.00 0.00 3.69
2598 7591 2.034124 GCCACATCAGCATAAATGGGT 58.966 47.619 0.00 0.00 0.00 4.51
2599 7592 1.342174 GGCCACATCAGCATAAATGGG 59.658 52.381 0.00 0.00 0.00 4.00
2600 7593 1.001048 CGGCCACATCAGCATAAATGG 60.001 52.381 2.24 0.00 0.00 3.16
2601 7594 1.948834 TCGGCCACATCAGCATAAATG 59.051 47.619 2.24 0.00 0.00 2.32
2602 7595 2.346766 TCGGCCACATCAGCATAAAT 57.653 45.000 2.24 0.00 0.00 1.40
2603 7596 2.121291 TTCGGCCACATCAGCATAAA 57.879 45.000 2.24 0.00 0.00 1.40
2604 7597 1.742831 GTTTCGGCCACATCAGCATAA 59.257 47.619 2.24 0.00 0.00 1.90
2605 7598 1.065491 AGTTTCGGCCACATCAGCATA 60.065 47.619 2.24 0.00 0.00 3.14
2606 7599 0.322816 AGTTTCGGCCACATCAGCAT 60.323 50.000 2.24 0.00 0.00 3.79
2607 7600 0.323302 TAGTTTCGGCCACATCAGCA 59.677 50.000 2.24 0.00 0.00 4.41
2608 7601 1.331756 CATAGTTTCGGCCACATCAGC 59.668 52.381 2.24 0.00 0.00 4.26
2609 7602 2.905075 TCATAGTTTCGGCCACATCAG 58.095 47.619 2.24 0.00 0.00 2.90
2610 7603 3.342377 TTCATAGTTTCGGCCACATCA 57.658 42.857 2.24 0.00 0.00 3.07
2611 7604 4.900635 AATTCATAGTTTCGGCCACATC 57.099 40.909 2.24 0.00 0.00 3.06
2612 7605 6.151985 TGTTTAATTCATAGTTTCGGCCACAT 59.848 34.615 2.24 0.00 0.00 3.21
2613 7606 5.473846 TGTTTAATTCATAGTTTCGGCCACA 59.526 36.000 2.24 0.00 0.00 4.17
2614 7607 5.945155 TGTTTAATTCATAGTTTCGGCCAC 58.055 37.500 2.24 0.00 0.00 5.01
2615 7608 6.767524 ATGTTTAATTCATAGTTTCGGCCA 57.232 33.333 2.24 0.00 0.00 5.36
2616 7609 9.744468 AATTATGTTTAATTCATAGTTTCGGCC 57.256 29.630 0.00 0.00 33.66 6.13
2634 7627 8.736244 GGCCGGTCATTTATATACAATTATGTT 58.264 33.333 0.00 0.00 41.05 2.71
2635 7628 7.885922 TGGCCGGTCATTTATATACAATTATGT 59.114 33.333 3.51 0.00 43.74 2.29
2636 7629 8.275015 TGGCCGGTCATTTATATACAATTATG 57.725 34.615 3.51 0.00 0.00 1.90
2637 7630 8.871629 TTGGCCGGTCATTTATATACAATTAT 57.128 30.769 10.94 0.00 0.00 1.28
2638 7631 8.569641 GTTTGGCCGGTCATTTATATACAATTA 58.430 33.333 10.94 0.00 0.00 1.40
2639 7632 7.430441 GTTTGGCCGGTCATTTATATACAATT 58.570 34.615 10.94 0.00 0.00 2.32
2640 7633 6.293735 CGTTTGGCCGGTCATTTATATACAAT 60.294 38.462 10.94 0.00 0.00 2.71
2641 7634 5.007823 CGTTTGGCCGGTCATTTATATACAA 59.992 40.000 10.94 0.00 0.00 2.41
2642 7635 4.512198 CGTTTGGCCGGTCATTTATATACA 59.488 41.667 10.94 0.00 0.00 2.29
2643 7636 4.512571 ACGTTTGGCCGGTCATTTATATAC 59.487 41.667 10.94 0.00 0.00 1.47
2644 7637 4.706035 ACGTTTGGCCGGTCATTTATATA 58.294 39.130 10.94 0.00 0.00 0.86
2645 7638 3.547746 ACGTTTGGCCGGTCATTTATAT 58.452 40.909 10.94 0.00 0.00 0.86
2646 7639 2.937799 GACGTTTGGCCGGTCATTTATA 59.062 45.455 10.94 0.00 0.00 0.98
2647 7640 1.741145 GACGTTTGGCCGGTCATTTAT 59.259 47.619 10.94 0.00 0.00 1.40
2648 7641 1.158434 GACGTTTGGCCGGTCATTTA 58.842 50.000 10.94 0.00 0.00 1.40
2649 7642 1.847890 CGACGTTTGGCCGGTCATTT 61.848 55.000 10.94 0.00 0.00 2.32
2650 7643 2.322081 CGACGTTTGGCCGGTCATT 61.322 57.895 10.94 0.00 0.00 2.57
2651 7644 2.740826 CGACGTTTGGCCGGTCAT 60.741 61.111 10.94 0.00 0.00 3.06
2652 7645 4.973055 CCGACGTTTGGCCGGTCA 62.973 66.667 3.51 3.51 38.55 4.02
2659 7652 1.281656 GACTTTGGCCGACGTTTGG 59.718 57.895 3.17 3.55 0.00 3.28
2660 7653 1.281656 GGACTTTGGCCGACGTTTG 59.718 57.895 3.17 0.00 0.00 2.93
2661 7654 1.153127 TGGACTTTGGCCGACGTTT 60.153 52.632 3.17 0.00 0.00 3.60
2662 7655 1.890510 GTGGACTTTGGCCGACGTT 60.891 57.895 3.17 0.00 0.00 3.99
2663 7656 2.280592 GTGGACTTTGGCCGACGT 60.281 61.111 0.73 0.73 0.00 4.34
2664 7657 0.320073 TAAGTGGACTTTGGCCGACG 60.320 55.000 0.00 0.00 37.40 5.12
2665 7658 1.001633 TCTAAGTGGACTTTGGCCGAC 59.998 52.381 0.00 0.00 37.40 4.79
2666 7659 1.001633 GTCTAAGTGGACTTTGGCCGA 59.998 52.381 0.00 0.00 37.40 5.54
2667 7660 1.270625 TGTCTAAGTGGACTTTGGCCG 60.271 52.381 0.00 0.00 37.40 6.13
2668 7661 2.561478 TGTCTAAGTGGACTTTGGCC 57.439 50.000 0.00 0.00 37.40 5.36
2669 7662 6.759497 ATTTATGTCTAAGTGGACTTTGGC 57.241 37.500 0.00 0.00 37.40 4.52
2670 7663 9.667107 TTCTATTTATGTCTAAGTGGACTTTGG 57.333 33.333 0.00 0.00 37.40 3.28
2693 7686 8.141909 GGTGGCACTAAGAGTTTTTAATTTTCT 58.858 33.333 18.45 0.00 0.00 2.52
2694 7687 7.114388 CGGTGGCACTAAGAGTTTTTAATTTTC 59.886 37.037 18.45 0.00 0.00 2.29
2695 7688 6.921307 CGGTGGCACTAAGAGTTTTTAATTTT 59.079 34.615 18.45 0.00 0.00 1.82
2696 7689 6.443792 CGGTGGCACTAAGAGTTTTTAATTT 58.556 36.000 18.45 0.00 0.00 1.82
2697 7690 5.564063 GCGGTGGCACTAAGAGTTTTTAATT 60.564 40.000 18.45 0.00 39.62 1.40
2698 7691 4.082949 GCGGTGGCACTAAGAGTTTTTAAT 60.083 41.667 18.45 0.00 39.62 1.40
2699 7692 3.251487 GCGGTGGCACTAAGAGTTTTTAA 59.749 43.478 18.45 0.00 39.62 1.52
2700 7693 2.809696 GCGGTGGCACTAAGAGTTTTTA 59.190 45.455 18.45 0.00 39.62 1.52
2701 7694 1.607148 GCGGTGGCACTAAGAGTTTTT 59.393 47.619 18.45 0.00 39.62 1.94
2702 7695 1.235724 GCGGTGGCACTAAGAGTTTT 58.764 50.000 18.45 0.00 39.62 2.43
2703 7696 0.949105 CGCGGTGGCACTAAGAGTTT 60.949 55.000 18.45 0.00 39.92 2.66
2704 7697 1.374252 CGCGGTGGCACTAAGAGTT 60.374 57.895 18.45 0.00 39.92 3.01
2705 7698 2.261671 CGCGGTGGCACTAAGAGT 59.738 61.111 18.45 0.00 39.92 3.24
2706 7699 3.188786 GCGCGGTGGCACTAAGAG 61.189 66.667 18.45 11.87 39.92 2.85
2707 7700 3.234630 AAGCGCGGTGGCACTAAGA 62.235 57.895 18.45 0.00 39.92 2.10
2708 7701 2.742372 AAGCGCGGTGGCACTAAG 60.742 61.111 18.45 10.45 39.92 2.18
2709 7702 3.047280 CAAGCGCGGTGGCACTAA 61.047 61.111 18.45 0.00 39.92 2.24
2722 7715 3.443045 CATCCCGGTGCACCAAGC 61.443 66.667 34.16 8.76 45.96 4.01
2723 7716 2.034066 ACATCCCGGTGCACCAAG 59.966 61.111 34.16 24.14 35.14 3.61
2724 7717 2.282110 CACATCCCGGTGCACCAA 60.282 61.111 34.16 19.71 35.14 3.67
2730 7723 2.475466 GCATCTGCACATCCCGGTG 61.475 63.158 0.00 0.00 41.59 4.94
2731 7724 2.124570 GCATCTGCACATCCCGGT 60.125 61.111 0.00 0.00 41.59 5.28
2732 7725 2.184830 CAGCATCTGCACATCCCGG 61.185 63.158 4.79 0.00 45.16 5.73
2733 7726 3.417601 CAGCATCTGCACATCCCG 58.582 61.111 4.79 0.00 45.16 5.14
2742 7735 2.113433 GCTCAGGTGGCAGCATCTG 61.113 63.158 20.04 8.76 35.56 2.90
2743 7736 2.271497 GCTCAGGTGGCAGCATCT 59.729 61.111 20.04 0.00 35.56 2.90
2744 7737 3.200593 CGCTCAGGTGGCAGCATC 61.201 66.667 20.04 3.65 35.15 3.91
2745 7738 4.790962 CCGCTCAGGTGGCAGCAT 62.791 66.667 20.04 0.92 36.23 3.79
2773 7766 3.535962 CTCCTCCTCCTCCGCTGC 61.536 72.222 0.00 0.00 0.00 5.25
2774 7767 2.837291 CCTCCTCCTCCTCCGCTG 60.837 72.222 0.00 0.00 0.00 5.18
2775 7768 3.024356 TCCTCCTCCTCCTCCGCT 61.024 66.667 0.00 0.00 0.00 5.52
2776 7769 2.520741 CTCCTCCTCCTCCTCCGC 60.521 72.222 0.00 0.00 0.00 5.54
2777 7770 2.197324 CCTCCTCCTCCTCCTCCG 59.803 72.222 0.00 0.00 0.00 4.63
2778 7771 2.612251 CCCTCCTCCTCCTCCTCC 59.388 72.222 0.00 0.00 0.00 4.30
2779 7772 2.612251 CCCCTCCTCCTCCTCCTC 59.388 72.222 0.00 0.00 0.00 3.71
2780 7773 3.773154 GCCCCTCCTCCTCCTCCT 61.773 72.222 0.00 0.00 0.00 3.69
2781 7774 4.095400 TGCCCCTCCTCCTCCTCC 62.095 72.222 0.00 0.00 0.00 4.30
2782 7775 2.766229 GTGCCCCTCCTCCTCCTC 60.766 72.222 0.00 0.00 0.00 3.71
2783 7776 3.615811 TGTGCCCCTCCTCCTCCT 61.616 66.667 0.00 0.00 0.00 3.69
2784 7777 3.086600 CTGTGCCCCTCCTCCTCC 61.087 72.222 0.00 0.00 0.00 4.30
2785 7778 3.086600 CCTGTGCCCCTCCTCCTC 61.087 72.222 0.00 0.00 0.00 3.71
2786 7779 3.615811 TCCTGTGCCCCTCCTCCT 61.616 66.667 0.00 0.00 0.00 3.69
2787 7780 3.086600 CTCCTGTGCCCCTCCTCC 61.087 72.222 0.00 0.00 0.00 4.30
2788 7781 2.905676 ATCCTCCTGTGCCCCTCCTC 62.906 65.000 0.00 0.00 0.00 3.71
2789 7782 2.965927 ATCCTCCTGTGCCCCTCCT 61.966 63.158 0.00 0.00 0.00 3.69
2790 7783 2.367512 ATCCTCCTGTGCCCCTCC 60.368 66.667 0.00 0.00 0.00 4.30
2791 7784 1.690633 TCATCCTCCTGTGCCCCTC 60.691 63.158 0.00 0.00 0.00 4.30
2792 7785 1.692042 CTCATCCTCCTGTGCCCCT 60.692 63.158 0.00 0.00 0.00 4.79
2793 7786 2.750657 CCTCATCCTCCTGTGCCCC 61.751 68.421 0.00 0.00 0.00 5.80
2794 7787 2.914289 CCTCATCCTCCTGTGCCC 59.086 66.667 0.00 0.00 0.00 5.36
2795 7788 2.191641 GCCTCATCCTCCTGTGCC 59.808 66.667 0.00 0.00 0.00 5.01
2796 7789 2.202987 CGCCTCATCCTCCTGTGC 60.203 66.667 0.00 0.00 0.00 4.57
2797 7790 2.202987 GCGCCTCATCCTCCTGTG 60.203 66.667 0.00 0.00 0.00 3.66
2798 7791 3.474570 GGCGCCTCATCCTCCTGT 61.475 66.667 22.15 0.00 0.00 4.00
2799 7792 4.598894 CGGCGCCTCATCCTCCTG 62.599 72.222 26.68 0.00 0.00 3.86
2838 7831 0.179111 TTCGACAATAGCTCCGGCAG 60.179 55.000 0.00 0.00 41.70 4.85
2839 7832 0.179111 CTTCGACAATAGCTCCGGCA 60.179 55.000 0.00 0.00 41.70 5.69
2840 7833 0.102481 TCTTCGACAATAGCTCCGGC 59.898 55.000 0.00 0.00 39.06 6.13
2841 7834 1.866063 GCTCTTCGACAATAGCTCCGG 60.866 57.143 0.00 0.00 30.69 5.14
2842 7835 1.482278 GCTCTTCGACAATAGCTCCG 58.518 55.000 0.00 0.00 30.69 4.63
2843 7836 1.539280 GGGCTCTTCGACAATAGCTCC 60.539 57.143 0.00 4.33 33.27 4.70
2844 7837 1.539280 GGGGCTCTTCGACAATAGCTC 60.539 57.143 0.00 3.81 32.50 4.09
2845 7838 0.466124 GGGGCTCTTCGACAATAGCT 59.534 55.000 0.00 0.00 33.27 3.32
2846 7839 0.178068 TGGGGCTCTTCGACAATAGC 59.822 55.000 0.00 0.00 32.20 2.97
2847 7840 2.487934 CATGGGGCTCTTCGACAATAG 58.512 52.381 0.00 0.00 0.00 1.73
2848 7841 1.140852 CCATGGGGCTCTTCGACAATA 59.859 52.381 2.85 0.00 0.00 1.90
2849 7842 0.107017 CCATGGGGCTCTTCGACAAT 60.107 55.000 2.85 0.00 0.00 2.71
2850 7843 1.299648 CCATGGGGCTCTTCGACAA 59.700 57.895 2.85 0.00 0.00 3.18
2851 7844 2.989639 CCATGGGGCTCTTCGACA 59.010 61.111 2.85 0.00 0.00 4.35
2863 7856 0.041090 AACCCAAACCCTAGCCATGG 59.959 55.000 7.63 7.63 0.00 3.66
2864 7857 1.185315 CAACCCAAACCCTAGCCATG 58.815 55.000 0.00 0.00 0.00 3.66
2865 7858 0.783850 ACAACCCAAACCCTAGCCAT 59.216 50.000 0.00 0.00 0.00 4.40
2866 7859 0.111639 GACAACCCAAACCCTAGCCA 59.888 55.000 0.00 0.00 0.00 4.75
2867 7860 0.958876 CGACAACCCAAACCCTAGCC 60.959 60.000 0.00 0.00 0.00 3.93
2868 7861 1.583495 GCGACAACCCAAACCCTAGC 61.583 60.000 0.00 0.00 0.00 3.42
2869 7862 0.958876 GGCGACAACCCAAACCCTAG 60.959 60.000 0.00 0.00 0.00 3.02
2870 7863 1.073548 GGCGACAACCCAAACCCTA 59.926 57.895 0.00 0.00 0.00 3.53
2871 7864 2.203437 GGCGACAACCCAAACCCT 60.203 61.111 0.00 0.00 0.00 4.34
2872 7865 2.519780 TGGCGACAACCCAAACCC 60.520 61.111 0.00 0.00 37.44 4.11
2873 7866 3.039134 CTGGCGACAACCCAAACC 58.961 61.111 0.00 0.00 42.06 3.27
2874 7867 2.335011 GCTGGCGACAACCCAAAC 59.665 61.111 0.00 0.00 42.06 2.93
2875 7868 3.283684 CGCTGGCGACAACCCAAA 61.284 61.111 9.51 0.00 42.06 3.28
2876 7869 4.243008 TCGCTGGCGACAACCCAA 62.243 61.111 13.78 0.00 44.01 4.12
2877 7870 4.680237 CTCGCTGGCGACAACCCA 62.680 66.667 13.78 0.00 44.01 4.51
2879 7872 3.876589 TTCCTCGCTGGCGACAACC 62.877 63.158 13.78 0.00 44.01 3.77
2880 7873 2.357034 TTCCTCGCTGGCGACAAC 60.357 61.111 13.78 0.00 44.01 3.32
2881 7874 2.048222 CTTCCTCGCTGGCGACAA 60.048 61.111 13.78 8.64 44.01 3.18
2882 7875 4.742201 GCTTCCTCGCTGGCGACA 62.742 66.667 13.78 0.00 44.01 4.35
2883 7876 4.742201 TGCTTCCTCGCTGGCGAC 62.742 66.667 13.78 4.73 44.01 5.19
2884 7877 4.742201 GTGCTTCCTCGCTGGCGA 62.742 66.667 16.68 16.68 46.87 5.54
2886 7879 4.742201 TCGTGCTTCCTCGCTGGC 62.742 66.667 0.00 0.00 35.26 4.85
2887 7880 2.048222 TTCGTGCTTCCTCGCTGG 60.048 61.111 0.00 0.00 37.10 4.85
2888 7881 2.097038 CCTTCGTGCTTCCTCGCTG 61.097 63.158 0.00 0.00 0.00 5.18
2889 7882 2.219325 CTCCTTCGTGCTTCCTCGCT 62.219 60.000 0.00 0.00 0.00 4.93
2890 7883 1.807573 CTCCTTCGTGCTTCCTCGC 60.808 63.158 0.00 0.00 0.00 5.03
2891 7884 1.153745 CCTCCTTCGTGCTTCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
2892 7885 0.390472 CACCTCCTTCGTGCTTCCTC 60.390 60.000 0.00 0.00 0.00 3.71
2893 7886 1.674057 CACCTCCTTCGTGCTTCCT 59.326 57.895 0.00 0.00 0.00 3.36
2894 7887 1.376037 CCACCTCCTTCGTGCTTCC 60.376 63.158 0.00 0.00 0.00 3.46
2895 7888 2.035442 GCCACCTCCTTCGTGCTTC 61.035 63.158 0.00 0.00 0.00 3.86
2896 7889 2.032681 GCCACCTCCTTCGTGCTT 59.967 61.111 0.00 0.00 0.00 3.91
2897 7890 4.379243 CGCCACCTCCTTCGTGCT 62.379 66.667 0.00 0.00 0.00 4.40
2899 7892 4.760047 CCCGCCACCTCCTTCGTG 62.760 72.222 0.00 0.00 0.00 4.35
2907 7900 4.499116 ATCTAGCCCCCGCCACCT 62.499 66.667 0.00 0.00 34.57 4.00
2908 7901 4.256180 CATCTAGCCCCCGCCACC 62.256 72.222 0.00 0.00 34.57 4.61
2909 7902 3.480133 ACATCTAGCCCCCGCCAC 61.480 66.667 0.00 0.00 34.57 5.01
2910 7903 3.479203 CACATCTAGCCCCCGCCA 61.479 66.667 0.00 0.00 34.57 5.69
2911 7904 4.256180 CCACATCTAGCCCCCGCC 62.256 72.222 0.00 0.00 34.57 6.13
2912 7905 3.161450 TCCACATCTAGCCCCCGC 61.161 66.667 0.00 0.00 0.00 6.13
2913 7906 2.822399 GTCCACATCTAGCCCCCG 59.178 66.667 0.00 0.00 0.00 5.73
2914 7907 2.808206 CCGTCCACATCTAGCCCCC 61.808 68.421 0.00 0.00 0.00 5.40
2915 7908 1.335132 TTCCGTCCACATCTAGCCCC 61.335 60.000 0.00 0.00 0.00 5.80
2916 7909 0.105039 CTTCCGTCCACATCTAGCCC 59.895 60.000 0.00 0.00 0.00 5.19
2917 7910 0.824759 ACTTCCGTCCACATCTAGCC 59.175 55.000 0.00 0.00 0.00 3.93
2918 7911 1.471676 CCACTTCCGTCCACATCTAGC 60.472 57.143 0.00 0.00 0.00 3.42
2919 7912 2.100197 TCCACTTCCGTCCACATCTAG 58.900 52.381 0.00 0.00 0.00 2.43
2920 7913 2.225382 TCCACTTCCGTCCACATCTA 57.775 50.000 0.00 0.00 0.00 1.98
2921 7914 1.208052 CATCCACTTCCGTCCACATCT 59.792 52.381 0.00 0.00 0.00 2.90
2922 7915 1.207089 TCATCCACTTCCGTCCACATC 59.793 52.381 0.00 0.00 0.00 3.06
2923 7916 1.208052 CTCATCCACTTCCGTCCACAT 59.792 52.381 0.00 0.00 0.00 3.21
2924 7917 0.608130 CTCATCCACTTCCGTCCACA 59.392 55.000 0.00 0.00 0.00 4.17
2925 7918 0.741221 GCTCATCCACTTCCGTCCAC 60.741 60.000 0.00 0.00 0.00 4.02
2926 7919 1.596934 GCTCATCCACTTCCGTCCA 59.403 57.895 0.00 0.00 0.00 4.02
2927 7920 1.153349 GGCTCATCCACTTCCGTCC 60.153 63.158 0.00 0.00 34.01 4.79
2928 7921 1.596934 TGGCTCATCCACTTCCGTC 59.403 57.895 0.00 0.00 40.72 4.79
2929 7922 3.805928 TGGCTCATCCACTTCCGT 58.194 55.556 0.00 0.00 40.72 4.69
2936 7929 3.338250 GGGGTGGTGGCTCATCCA 61.338 66.667 11.62 1.14 44.18 3.41
3258 8251 1.229336 AGCCCACTAGTCAGCCAGT 60.229 57.895 9.52 0.00 0.00 4.00
3259 8252 1.519719 GAGCCCACTAGTCAGCCAG 59.480 63.158 9.52 0.00 0.00 4.85
3260 8253 1.990060 GGAGCCCACTAGTCAGCCA 60.990 63.158 9.52 0.00 0.00 4.75
3261 8254 2.904131 GGAGCCCACTAGTCAGCC 59.096 66.667 9.52 2.89 0.00 4.85
3262 8255 2.496817 CGGAGCCCACTAGTCAGC 59.503 66.667 5.65 5.65 0.00 4.26
3278 8271 0.526739 TTATGACGACCACCGATGCG 60.527 55.000 0.00 0.00 41.76 4.73
3279 8272 1.647346 TTTATGACGACCACCGATGC 58.353 50.000 0.00 0.00 41.76 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.