Multiple sequence alignment - TraesCS6A01G296900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G296900 | chr6A | 100.000 | 3195 | 0 | 0 | 1 | 3195 | 530253944 | 530250750 | 0.000000e+00 | 5901.0 |
1 | TraesCS6A01G296900 | chr6A | 96.820 | 283 | 9 | 0 | 2682 | 2964 | 562065418 | 562065700 | 1.040000e-129 | 473.0 |
2 | TraesCS6A01G296900 | chr6D | 94.330 | 1746 | 79 | 6 | 781 | 2510 | 385787331 | 385785590 | 0.000000e+00 | 2658.0 |
3 | TraesCS6A01G296900 | chr6D | 93.780 | 209 | 12 | 1 | 2963 | 3171 | 385723786 | 385723579 | 2.390000e-81 | 313.0 |
4 | TraesCS6A01G296900 | chr6D | 93.194 | 191 | 13 | 0 | 2499 | 2689 | 385723974 | 385723784 | 6.750000e-72 | 281.0 |
5 | TraesCS6A01G296900 | chr6B | 93.071 | 1371 | 67 | 10 | 962 | 2314 | 576269407 | 576268047 | 0.000000e+00 | 1980.0 |
6 | TraesCS6A01G296900 | chr6B | 84.058 | 621 | 97 | 2 | 1 | 620 | 702198771 | 702198152 | 5.900000e-167 | 597.0 |
7 | TraesCS6A01G296900 | chr6B | 92.698 | 315 | 14 | 6 | 657 | 968 | 576276206 | 576275898 | 2.260000e-121 | 446.0 |
8 | TraesCS6A01G296900 | chr6B | 85.106 | 329 | 40 | 6 | 2363 | 2689 | 576267114 | 576266793 | 8.550000e-86 | 327.0 |
9 | TraesCS6A01G296900 | chr6B | 91.388 | 209 | 18 | 0 | 2963 | 3171 | 576266795 | 576266587 | 1.450000e-73 | 287.0 |
10 | TraesCS6A01G296900 | chr6B | 87.500 | 64 | 7 | 1 | 2386 | 2448 | 119972826 | 119972889 | 4.420000e-09 | 73.1 |
11 | TraesCS6A01G296900 | chr5A | 92.195 | 615 | 48 | 0 | 1 | 615 | 475600740 | 475600126 | 0.000000e+00 | 870.0 |
12 | TraesCS6A01G296900 | chr5A | 89.268 | 615 | 64 | 2 | 2 | 615 | 673677596 | 673678209 | 0.000000e+00 | 769.0 |
13 | TraesCS6A01G296900 | chr5A | 97.491 | 279 | 7 | 0 | 2685 | 2963 | 409134514 | 409134236 | 8.020000e-131 | 477.0 |
14 | TraesCS6A01G296900 | chr5A | 90.698 | 43 | 3 | 1 | 627 | 669 | 34826730 | 34826689 | 4.450000e-04 | 56.5 |
15 | TraesCS6A01G296900 | chr4A | 89.448 | 616 | 65 | 0 | 1 | 616 | 506703894 | 506703279 | 0.000000e+00 | 778.0 |
16 | TraesCS6A01G296900 | chr4A | 89.867 | 375 | 35 | 3 | 1008 | 1381 | 41920260 | 41919888 | 2.230000e-131 | 479.0 |
17 | TraesCS6A01G296900 | chr4A | 97.133 | 279 | 8 | 0 | 2685 | 2963 | 448681554 | 448681832 | 3.730000e-129 | 472.0 |
18 | TraesCS6A01G296900 | chr7B | 84.943 | 611 | 89 | 3 | 5 | 614 | 697865283 | 697864675 | 1.630000e-172 | 616.0 |
19 | TraesCS6A01G296900 | chr7B | 97.482 | 278 | 7 | 0 | 2687 | 2964 | 164593512 | 164593235 | 2.880000e-130 | 475.0 |
20 | TraesCS6A01G296900 | chr7B | 97.153 | 281 | 8 | 0 | 2683 | 2963 | 603479604 | 603479324 | 2.880000e-130 | 475.0 |
21 | TraesCS6A01G296900 | chrUn | 86.406 | 537 | 70 | 3 | 80 | 615 | 240121404 | 240120870 | 4.590000e-163 | 584.0 |
22 | TraesCS6A01G296900 | chrUn | 86.296 | 540 | 71 | 3 | 77 | 615 | 404913970 | 404914507 | 4.590000e-163 | 584.0 |
23 | TraesCS6A01G296900 | chrUn | 92.308 | 52 | 1 | 3 | 2397 | 2447 | 76985767 | 76985816 | 1.590000e-08 | 71.3 |
24 | TraesCS6A01G296900 | chrUn | 92.308 | 52 | 1 | 3 | 2397 | 2447 | 76996752 | 76996801 | 1.590000e-08 | 71.3 |
25 | TraesCS6A01G296900 | chrUn | 92.308 | 52 | 1 | 3 | 2397 | 2447 | 77015887 | 77015936 | 1.590000e-08 | 71.3 |
26 | TraesCS6A01G296900 | chrUn | 92.308 | 52 | 1 | 3 | 2397 | 2447 | 341413862 | 341413911 | 1.590000e-08 | 71.3 |
27 | TraesCS6A01G296900 | chrUn | 92.308 | 52 | 1 | 3 | 2397 | 2447 | 399860355 | 399860306 | 1.590000e-08 | 71.3 |
28 | TraesCS6A01G296900 | chr2B | 86.406 | 537 | 70 | 3 | 80 | 615 | 77825501 | 77824967 | 4.590000e-163 | 584.0 |
29 | TraesCS6A01G296900 | chr2B | 86.220 | 537 | 71 | 3 | 80 | 615 | 77869438 | 77868904 | 2.140000e-161 | 579.0 |
30 | TraesCS6A01G296900 | chr2B | 96.786 | 280 | 8 | 1 | 2685 | 2964 | 679893989 | 679893711 | 1.740000e-127 | 466.0 |
31 | TraesCS6A01G296900 | chr2B | 78.400 | 375 | 72 | 6 | 1010 | 1376 | 39978551 | 39978178 | 5.330000e-58 | 235.0 |
32 | TraesCS6A01G296900 | chr4D | 90.349 | 373 | 33 | 3 | 1008 | 1379 | 422548511 | 422548881 | 1.330000e-133 | 486.0 |
33 | TraesCS6A01G296900 | chr5B | 97.173 | 283 | 8 | 0 | 2685 | 2967 | 657275242 | 657275524 | 2.230000e-131 | 479.0 |
34 | TraesCS6A01G296900 | chr5B | 97.122 | 278 | 8 | 0 | 2684 | 2961 | 267776746 | 267777023 | 1.340000e-128 | 470.0 |
35 | TraesCS6A01G296900 | chr5B | 96.786 | 280 | 9 | 0 | 2685 | 2964 | 46054121 | 46054400 | 4.830000e-128 | 468.0 |
36 | TraesCS6A01G296900 | chr4B | 89.655 | 377 | 35 | 4 | 1008 | 1381 | 519403873 | 519404248 | 8.020000e-131 | 477.0 |
37 | TraesCS6A01G296900 | chr2A | 79.625 | 373 | 70 | 3 | 1010 | 1376 | 27277241 | 27276869 | 2.440000e-66 | 263.0 |
38 | TraesCS6A01G296900 | chr2A | 78.075 | 374 | 70 | 9 | 1012 | 1376 | 27127074 | 27126704 | 3.210000e-55 | 226.0 |
39 | TraesCS6A01G296900 | chr2A | 74.409 | 254 | 55 | 9 | 1919 | 2167 | 27124965 | 27124717 | 2.030000e-17 | 100.0 |
40 | TraesCS6A01G296900 | chr2D | 78.723 | 376 | 68 | 9 | 1010 | 1376 | 24878059 | 24878431 | 1.150000e-59 | 241.0 |
41 | TraesCS6A01G296900 | chr2D | 74.194 | 248 | 54 | 9 | 1919 | 2161 | 24878928 | 24879170 | 9.440000e-16 | 95.3 |
42 | TraesCS6A01G296900 | chr7D | 77.860 | 271 | 44 | 11 | 1543 | 1808 | 37654136 | 37654395 | 1.530000e-33 | 154.0 |
43 | TraesCS6A01G296900 | chr7D | 100.000 | 29 | 0 | 0 | 627 | 655 | 611354388 | 611354360 | 2.000000e-03 | 54.7 |
44 | TraesCS6A01G296900 | chr7D | 100.000 | 29 | 0 | 0 | 627 | 655 | 611354422 | 611354394 | 2.000000e-03 | 54.7 |
45 | TraesCS6A01G296900 | chr3B | 89.091 | 55 | 3 | 2 | 2403 | 2454 | 506972676 | 506972622 | 7.400000e-07 | 65.8 |
46 | TraesCS6A01G296900 | chr7A | 100.000 | 29 | 0 | 0 | 627 | 655 | 127657978 | 127658006 | 2.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G296900 | chr6A | 530250750 | 530253944 | 3194 | True | 5901.000000 | 5901 | 100.000 | 1 | 3195 | 1 | chr6A.!!$R1 | 3194 |
1 | TraesCS6A01G296900 | chr6D | 385785590 | 385787331 | 1741 | True | 2658.000000 | 2658 | 94.330 | 781 | 2510 | 1 | chr6D.!!$R1 | 1729 |
2 | TraesCS6A01G296900 | chr6B | 576266587 | 576269407 | 2820 | True | 864.666667 | 1980 | 89.855 | 962 | 3171 | 3 | chr6B.!!$R3 | 2209 |
3 | TraesCS6A01G296900 | chr6B | 702198152 | 702198771 | 619 | True | 597.000000 | 597 | 84.058 | 1 | 620 | 1 | chr6B.!!$R2 | 619 |
4 | TraesCS6A01G296900 | chr5A | 475600126 | 475600740 | 614 | True | 870.000000 | 870 | 92.195 | 1 | 615 | 1 | chr5A.!!$R3 | 614 |
5 | TraesCS6A01G296900 | chr5A | 673677596 | 673678209 | 613 | False | 769.000000 | 769 | 89.268 | 2 | 615 | 1 | chr5A.!!$F1 | 613 |
6 | TraesCS6A01G296900 | chr4A | 506703279 | 506703894 | 615 | True | 778.000000 | 778 | 89.448 | 1 | 616 | 1 | chr4A.!!$R2 | 615 |
7 | TraesCS6A01G296900 | chr7B | 697864675 | 697865283 | 608 | True | 616.000000 | 616 | 84.943 | 5 | 614 | 1 | chr7B.!!$R3 | 609 |
8 | TraesCS6A01G296900 | chrUn | 240120870 | 240121404 | 534 | True | 584.000000 | 584 | 86.406 | 80 | 615 | 1 | chrUn.!!$R1 | 535 |
9 | TraesCS6A01G296900 | chrUn | 404913970 | 404914507 | 537 | False | 584.000000 | 584 | 86.296 | 77 | 615 | 1 | chrUn.!!$F5 | 538 |
10 | TraesCS6A01G296900 | chr2B | 77824967 | 77825501 | 534 | True | 584.000000 | 584 | 86.406 | 80 | 615 | 1 | chr2B.!!$R2 | 535 |
11 | TraesCS6A01G296900 | chr2B | 77868904 | 77869438 | 534 | True | 579.000000 | 579 | 86.220 | 80 | 615 | 1 | chr2B.!!$R3 | 535 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
430 | 431 | 0.034337 | GGCACGTGGGTGTAAGAGAA | 59.966 | 55.0 | 18.88 | 0.0 | 46.13 | 2.87 | F |
715 | 716 | 0.598680 | GATCTCGCCACCGGATCAAG | 60.599 | 60.0 | 9.46 | 0.0 | 39.17 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1358 | 1383 | 0.323629 | TTACCAGAAGGCAGGGTTCG | 59.676 | 55.0 | 0.0 | 0.0 | 39.06 | 3.95 | R |
2622 | 3537 | 0.313672 | TCCGTCCTGCAATTTTGTGC | 59.686 | 50.0 | 0.0 | 0.0 | 45.15 | 4.57 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
45 | 46 | 8.270744 | GGATATAATCAAGGGCAAGATGTCTAT | 58.729 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
63 | 64 | 0.250467 | ATGTTCGTTGCTGAGCCAGT | 60.250 | 50.000 | 0.23 | 0.00 | 33.43 | 4.00 |
118 | 119 | 0.409484 | CAAAACCCTCCCCTGGTCAT | 59.591 | 55.000 | 0.00 | 0.00 | 34.15 | 3.06 |
128 | 129 | 1.153369 | CCTGGTCATACCGCACTGG | 60.153 | 63.158 | 0.00 | 0.00 | 42.58 | 4.00 |
169 | 170 | 2.758089 | GGCAGATGGTTCAGCAGCG | 61.758 | 63.158 | 0.00 | 0.00 | 36.18 | 5.18 |
187 | 188 | 4.864334 | GCGGGGATGGTGCTGAGG | 62.864 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
231 | 232 | 1.260206 | GCGGCGTATCGATGTATCTG | 58.740 | 55.000 | 8.54 | 1.02 | 0.00 | 2.90 |
241 | 242 | 6.129431 | CGTATCGATGTATCTGTAACTGCAAC | 60.129 | 42.308 | 8.54 | 0.00 | 0.00 | 4.17 |
328 | 329 | 4.601406 | TGGGCCTATTATTGTCCAAACT | 57.399 | 40.909 | 4.53 | 0.00 | 0.00 | 2.66 |
337 | 338 | 5.524511 | TTATTGTCCAAACTGATTCGTCG | 57.475 | 39.130 | 0.00 | 0.00 | 0.00 | 5.12 |
341 | 342 | 2.803956 | GTCCAAACTGATTCGTCGGAAA | 59.196 | 45.455 | 0.00 | 0.00 | 35.40 | 3.13 |
344 | 345 | 3.120649 | CCAAACTGATTCGTCGGAAACTC | 60.121 | 47.826 | 0.00 | 0.00 | 35.40 | 3.01 |
358 | 359 | 2.160417 | GGAAACTCTCATGGCGTTGAAG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
359 | 360 | 2.839486 | AACTCTCATGGCGTTGAAGA | 57.161 | 45.000 | 0.00 | 0.00 | 0.00 | 2.87 |
407 | 408 | 5.692115 | TGGACATTTGGTAGCTGAGATTA | 57.308 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
416 | 417 | 2.593346 | AGCTGAGATTAAGAGGCACG | 57.407 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
430 | 431 | 0.034337 | GGCACGTGGGTGTAAGAGAA | 59.966 | 55.000 | 18.88 | 0.00 | 46.13 | 2.87 |
448 | 449 | 9.634300 | GTAAGAGAATTTATTCCGTCGAAAATC | 57.366 | 33.333 | 0.00 | 0.00 | 37.51 | 2.17 |
458 | 459 | 2.159707 | CCGTCGAAAATCAAGCGTGAAT | 60.160 | 45.455 | 6.39 | 0.00 | 37.30 | 2.57 |
495 | 496 | 6.393171 | CAGATCGATTGGCTTCATATAGTCA | 58.607 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
498 | 499 | 8.922237 | AGATCGATTGGCTTCATATAGTCATAT | 58.078 | 33.333 | 0.00 | 0.00 | 28.36 | 1.78 |
559 | 560 | 1.574428 | CGTGGAGGAACTTTTGCCG | 59.426 | 57.895 | 0.00 | 0.00 | 41.55 | 5.69 |
563 | 564 | 1.202830 | TGGAGGAACTTTTGCCGCTTA | 60.203 | 47.619 | 0.00 | 0.00 | 41.55 | 3.09 |
580 | 581 | 4.035208 | CCGCTTAATTGTAACCCTGTGATC | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
604 | 605 | 9.768215 | ATCTTGGAATAAAATCTCTTTTACCCA | 57.232 | 29.630 | 8.50 | 8.50 | 39.10 | 4.51 |
638 | 639 | 5.925189 | AATTAAAATGTATCGTGCGTTGC | 57.075 | 34.783 | 0.00 | 0.00 | 0.00 | 4.17 |
639 | 640 | 2.979401 | AAAATGTATCGTGCGTTGCA | 57.021 | 40.000 | 0.00 | 0.00 | 35.60 | 4.08 |
659 | 660 | 4.331962 | GCACGTGCAAACTTACTAATAGC | 58.668 | 43.478 | 34.52 | 0.72 | 41.59 | 2.97 |
660 | 661 | 4.726876 | GCACGTGCAAACTTACTAATAGCC | 60.727 | 45.833 | 34.52 | 0.00 | 41.59 | 3.93 |
661 | 662 | 4.630069 | CACGTGCAAACTTACTAATAGCCT | 59.370 | 41.667 | 0.82 | 0.00 | 0.00 | 4.58 |
662 | 663 | 5.808540 | CACGTGCAAACTTACTAATAGCCTA | 59.191 | 40.000 | 0.82 | 0.00 | 0.00 | 3.93 |
663 | 664 | 6.311935 | CACGTGCAAACTTACTAATAGCCTAA | 59.688 | 38.462 | 0.82 | 0.00 | 0.00 | 2.69 |
664 | 665 | 6.875195 | ACGTGCAAACTTACTAATAGCCTAAA | 59.125 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
665 | 666 | 7.388500 | ACGTGCAAACTTACTAATAGCCTAAAA | 59.612 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
666 | 667 | 8.395633 | CGTGCAAACTTACTAATAGCCTAAAAT | 58.604 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
667 | 668 | 9.503427 | GTGCAAACTTACTAATAGCCTAAAATG | 57.497 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
668 | 669 | 9.456147 | TGCAAACTTACTAATAGCCTAAAATGA | 57.544 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
669 | 670 | 9.937175 | GCAAACTTACTAATAGCCTAAAATGAG | 57.063 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
702 | 703 | 2.584418 | CCGCAGGCACAGATCTCG | 60.584 | 66.667 | 0.00 | 0.00 | 46.14 | 4.04 |
703 | 704 | 3.260483 | CGCAGGCACAGATCTCGC | 61.260 | 66.667 | 5.26 | 5.26 | 0.00 | 5.03 |
704 | 705 | 2.894387 | GCAGGCACAGATCTCGCC | 60.894 | 66.667 | 20.68 | 20.68 | 46.62 | 5.54 |
707 | 708 | 2.512515 | GGCACAGATCTCGCCACC | 60.513 | 66.667 | 22.52 | 4.77 | 45.52 | 4.61 |
708 | 709 | 2.887568 | GCACAGATCTCGCCACCG | 60.888 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
709 | 710 | 2.202797 | CACAGATCTCGCCACCGG | 60.203 | 66.667 | 0.00 | 0.00 | 34.56 | 5.28 |
710 | 711 | 2.362503 | ACAGATCTCGCCACCGGA | 60.363 | 61.111 | 9.46 | 0.00 | 34.56 | 5.14 |
711 | 712 | 1.758514 | ACAGATCTCGCCACCGGAT | 60.759 | 57.895 | 9.46 | 0.00 | 34.56 | 4.18 |
712 | 713 | 1.006805 | CAGATCTCGCCACCGGATC | 60.007 | 63.158 | 9.46 | 0.00 | 39.40 | 3.36 |
713 | 714 | 1.455773 | AGATCTCGCCACCGGATCA | 60.456 | 57.895 | 9.46 | 0.00 | 40.48 | 2.92 |
714 | 715 | 1.043116 | AGATCTCGCCACCGGATCAA | 61.043 | 55.000 | 9.46 | 0.00 | 40.48 | 2.57 |
715 | 716 | 0.598680 | GATCTCGCCACCGGATCAAG | 60.599 | 60.000 | 9.46 | 0.00 | 39.17 | 3.02 |
716 | 717 | 1.330655 | ATCTCGCCACCGGATCAAGT | 61.331 | 55.000 | 9.46 | 0.00 | 34.56 | 3.16 |
717 | 718 | 1.811266 | CTCGCCACCGGATCAAGTG | 60.811 | 63.158 | 9.46 | 7.25 | 34.56 | 3.16 |
718 | 719 | 3.499737 | CGCCACCGGATCAAGTGC | 61.500 | 66.667 | 9.46 | 0.00 | 32.48 | 4.40 |
719 | 720 | 3.499737 | GCCACCGGATCAAGTGCG | 61.500 | 66.667 | 9.46 | 4.41 | 41.82 | 5.34 |
720 | 721 | 2.047274 | CCACCGGATCAAGTGCGT | 60.047 | 61.111 | 9.46 | 0.00 | 40.39 | 5.24 |
721 | 722 | 2.390599 | CCACCGGATCAAGTGCGTG | 61.391 | 63.158 | 9.46 | 0.00 | 40.39 | 5.34 |
722 | 723 | 2.742372 | ACCGGATCAAGTGCGTGC | 60.742 | 61.111 | 9.46 | 0.00 | 40.39 | 5.34 |
723 | 724 | 3.499737 | CCGGATCAAGTGCGTGCC | 61.500 | 66.667 | 0.00 | 0.00 | 40.39 | 5.01 |
724 | 725 | 2.741985 | CGGATCAAGTGCGTGCCA | 60.742 | 61.111 | 0.00 | 0.00 | 36.85 | 4.92 |
725 | 726 | 2.870372 | GGATCAAGTGCGTGCCAC | 59.130 | 61.111 | 0.00 | 0.00 | 45.01 | 5.01 |
726 | 727 | 2.690778 | GGATCAAGTGCGTGCCACC | 61.691 | 63.158 | 0.00 | 0.00 | 45.83 | 4.61 |
727 | 728 | 3.027170 | GATCAAGTGCGTGCCACCG | 62.027 | 63.158 | 0.00 | 0.00 | 45.83 | 4.94 |
728 | 729 | 3.825160 | ATCAAGTGCGTGCCACCGT | 62.825 | 57.895 | 0.00 | 0.00 | 45.83 | 4.83 |
729 | 730 | 4.312231 | CAAGTGCGTGCCACCGTG | 62.312 | 66.667 | 0.00 | 0.00 | 45.83 | 4.94 |
732 | 733 | 4.973055 | GTGCGTGCCACCGTGGTA | 62.973 | 66.667 | 18.95 | 12.07 | 40.46 | 3.25 |
751 | 752 | 5.838529 | TGGTACACGATCGATTATCATTGT | 58.161 | 37.500 | 24.34 | 15.00 | 35.58 | 2.71 |
752 | 753 | 6.277605 | TGGTACACGATCGATTATCATTGTT | 58.722 | 36.000 | 24.34 | 0.94 | 34.11 | 2.83 |
753 | 754 | 6.419710 | TGGTACACGATCGATTATCATTGTTC | 59.580 | 38.462 | 24.34 | 10.34 | 34.11 | 3.18 |
754 | 755 | 5.907197 | ACACGATCGATTATCATTGTTCC | 57.093 | 39.130 | 24.34 | 0.00 | 33.87 | 3.62 |
755 | 756 | 5.356426 | ACACGATCGATTATCATTGTTCCA | 58.644 | 37.500 | 24.34 | 0.00 | 33.87 | 3.53 |
756 | 757 | 5.991606 | ACACGATCGATTATCATTGTTCCAT | 59.008 | 36.000 | 24.34 | 0.00 | 33.87 | 3.41 |
757 | 758 | 6.483307 | ACACGATCGATTATCATTGTTCCATT | 59.517 | 34.615 | 24.34 | 0.00 | 33.87 | 3.16 |
758 | 759 | 7.655732 | ACACGATCGATTATCATTGTTCCATTA | 59.344 | 33.333 | 24.34 | 0.00 | 33.87 | 1.90 |
759 | 760 | 8.659491 | CACGATCGATTATCATTGTTCCATTAT | 58.341 | 33.333 | 24.34 | 0.00 | 33.87 | 1.28 |
760 | 761 | 8.659491 | ACGATCGATTATCATTGTTCCATTATG | 58.341 | 33.333 | 24.34 | 0.00 | 33.87 | 1.90 |
761 | 762 | 7.637519 | CGATCGATTATCATTGTTCCATTATGC | 59.362 | 37.037 | 10.26 | 0.00 | 33.87 | 3.14 |
762 | 763 | 6.830736 | TCGATTATCATTGTTCCATTATGCG | 58.169 | 36.000 | 0.00 | 0.00 | 0.00 | 4.73 |
763 | 764 | 6.426633 | TCGATTATCATTGTTCCATTATGCGT | 59.573 | 34.615 | 0.00 | 0.00 | 0.00 | 5.24 |
764 | 765 | 7.041440 | TCGATTATCATTGTTCCATTATGCGTT | 60.041 | 33.333 | 0.00 | 0.00 | 0.00 | 4.84 |
765 | 766 | 8.227119 | CGATTATCATTGTTCCATTATGCGTTA | 58.773 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
766 | 767 | 9.891828 | GATTATCATTGTTCCATTATGCGTTAA | 57.108 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
767 | 768 | 9.897744 | ATTATCATTGTTCCATTATGCGTTAAG | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
785 | 786 | 6.022821 | CGTTAAGCTTAGTCTAGTCACTGAC | 58.977 | 44.000 | 6.24 | 0.38 | 0.00 | 3.51 |
795 | 796 | 4.075682 | TCTAGTCACTGACCTTCTGACAG | 58.924 | 47.826 | 5.51 | 0.00 | 37.39 | 3.51 |
831 | 832 | 1.352156 | CTCGCGGGAACAGTTAGCAC | 61.352 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
846 | 847 | 1.442769 | AGCACAGACAAATAGCACGG | 58.557 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
891 | 892 | 2.032924 | AGAAAAACGAAACCAAGAGCGG | 59.967 | 45.455 | 0.00 | 0.00 | 0.00 | 5.52 |
899 | 900 | 1.237285 | AACCAAGAGCGGCACATGAC | 61.237 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
909 | 910 | 1.656652 | GGCACATGACGAACAGCTAT | 58.343 | 50.000 | 0.00 | 0.00 | 0.00 | 2.97 |
943 | 944 | 1.537135 | CCGCTGACCTTTAGCTAGCTC | 60.537 | 57.143 | 23.26 | 6.47 | 39.00 | 4.09 |
957 | 958 | 4.083565 | AGCTAGCTCTATAAGTACCTGCC | 58.916 | 47.826 | 12.68 | 0.00 | 0.00 | 4.85 |
999 | 1000 | 3.620488 | TCACATATCAGAAGCCAAACCC | 58.380 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
1028 | 1053 | 3.810812 | GCAGCAGCTGATGGAGAC | 58.189 | 61.111 | 31.37 | 12.53 | 37.91 | 3.36 |
1030 | 1055 | 1.521010 | CAGCAGCTGATGGAGACCG | 60.521 | 63.158 | 24.22 | 0.00 | 32.44 | 4.79 |
1314 | 1339 | 2.479650 | CTCTCCGACGTCACCGAC | 59.520 | 66.667 | 17.16 | 0.00 | 37.88 | 4.79 |
1413 | 1438 | 6.748333 | TTTTTCTAGAATGATGGCTCACTG | 57.252 | 37.500 | 5.89 | 0.00 | 33.22 | 3.66 |
1491 | 1516 | 4.735132 | CGTGTCCGCCGTCCATGT | 62.735 | 66.667 | 0.00 | 0.00 | 0.00 | 3.21 |
1808 | 1833 | 4.323477 | TTCACCTTCGTGGCCGGG | 62.323 | 66.667 | 2.18 | 0.00 | 40.65 | 5.73 |
1866 | 1891 | 2.678471 | ATCATGTCTGATCGTGTGCA | 57.322 | 45.000 | 0.00 | 0.00 | 37.58 | 4.57 |
1901 | 1926 | 2.803155 | TTCTGACGCCACAGGGATGC | 62.803 | 60.000 | 5.22 | 0.00 | 38.31 | 3.91 |
1916 | 1941 | 0.320421 | GATGCCACCGCCGTATATGT | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2011 | 2036 | 2.355837 | GTGCTGTTCGTCTGCCGA | 60.356 | 61.111 | 8.84 | 0.00 | 45.66 | 5.54 |
2018 | 2043 | 3.068691 | TCGTCTGCCGAGGGAAGG | 61.069 | 66.667 | 0.00 | 0.00 | 41.60 | 3.46 |
2101 | 2126 | 2.744202 | ACCGTGTAAGAACGACGAGTAT | 59.256 | 45.455 | 0.00 | 0.00 | 46.49 | 2.12 |
2205 | 2233 | 0.250038 | ATGGAATGATCGAGCCCACG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2207 | 2235 | 0.179084 | GGAATGATCGAGCCCACGAA | 60.179 | 55.000 | 0.00 | 0.00 | 45.16 | 3.85 |
2262 | 2292 | 2.463752 | AGCCTGTTAGACGGGTAATCA | 58.536 | 47.619 | 7.70 | 0.00 | 46.46 | 2.57 |
2264 | 2294 | 2.822764 | CCTGTTAGACGGGTAATCAGC | 58.177 | 52.381 | 0.00 | 0.00 | 39.82 | 4.26 |
2395 | 3310 | 7.832187 | CACTTATTTTACCAATTACTCCCTCCA | 59.168 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
2534 | 3449 | 0.110486 | GGAGACCCAACCACACATGT | 59.890 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2535 | 3450 | 1.478654 | GGAGACCCAACCACACATGTT | 60.479 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
2536 | 3451 | 1.608590 | GAGACCCAACCACACATGTTG | 59.391 | 52.381 | 0.00 | 0.00 | 42.11 | 3.33 |
2575 | 3490 | 6.351033 | GCATGCCTATACCTAACATAGTAGCA | 60.351 | 42.308 | 6.36 | 0.00 | 31.86 | 3.49 |
2601 | 3516 | 5.407995 | GCTTAGCGAGATTATGAGCTTCAAT | 59.592 | 40.000 | 0.00 | 0.00 | 40.73 | 2.57 |
2603 | 3518 | 7.277539 | GCTTAGCGAGATTATGAGCTTCAATAT | 59.722 | 37.037 | 0.00 | 0.00 | 40.73 | 1.28 |
2622 | 3537 | 0.934496 | TTGAAGTTTCCGTGCTCGTG | 59.066 | 50.000 | 7.47 | 0.00 | 35.01 | 4.35 |
2623 | 3538 | 1.204312 | GAAGTTTCCGTGCTCGTGC | 59.796 | 57.895 | 7.47 | 1.71 | 40.20 | 5.34 |
2640 | 3556 | 2.813100 | GCACAAAATTGCAGGACGG | 58.187 | 52.632 | 0.00 | 0.00 | 42.49 | 4.79 |
2644 | 3560 | 3.452474 | CACAAAATTGCAGGACGGAAAA | 58.548 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
2663 | 3579 | 1.923356 | ACCAATCTTCCGGTTTGCAT | 58.077 | 45.000 | 0.00 | 0.00 | 28.43 | 3.96 |
2667 | 3583 | 3.056607 | CCAATCTTCCGGTTTGCATTCTT | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
2676 | 3592 | 3.426695 | CGGTTTGCATTCTTCCTGATGAC | 60.427 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2678 | 3594 | 4.380233 | GGTTTGCATTCTTCCTGATGACAG | 60.380 | 45.833 | 0.00 | 0.00 | 43.12 | 3.51 |
2685 | 3601 | 6.519382 | CATTCTTCCTGATGACAGCACTATA | 58.481 | 40.000 | 0.00 | 0.00 | 42.25 | 1.31 |
2689 | 3605 | 3.070159 | TCCTGATGACAGCACTATAAGGC | 59.930 | 47.826 | 0.00 | 0.00 | 42.25 | 4.35 |
2690 | 3606 | 3.070734 | CCTGATGACAGCACTATAAGGCT | 59.929 | 47.826 | 0.00 | 0.00 | 42.25 | 4.58 |
2701 | 3617 | 6.000219 | AGCACTATAAGGCTGATTGTAATGG | 59.000 | 40.000 | 0.00 | 0.00 | 39.30 | 3.16 |
2702 | 3618 | 5.182001 | GCACTATAAGGCTGATTGTAATGGG | 59.818 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2703 | 3619 | 5.707298 | CACTATAAGGCTGATTGTAATGGGG | 59.293 | 44.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2704 | 3620 | 5.610982 | ACTATAAGGCTGATTGTAATGGGGA | 59.389 | 40.000 | 0.00 | 0.00 | 0.00 | 4.81 |
2705 | 3621 | 3.303351 | AAGGCTGATTGTAATGGGGAG | 57.697 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2706 | 3622 | 2.208872 | AGGCTGATTGTAATGGGGAGT | 58.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2707 | 3623 | 3.393687 | AGGCTGATTGTAATGGGGAGTA | 58.606 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2708 | 3624 | 3.983410 | AGGCTGATTGTAATGGGGAGTAT | 59.017 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
2709 | 3625 | 4.042187 | AGGCTGATTGTAATGGGGAGTATC | 59.958 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
2710 | 3626 | 4.202461 | GGCTGATTGTAATGGGGAGTATCA | 60.202 | 45.833 | 0.00 | 0.00 | 36.25 | 2.15 |
2711 | 3627 | 5.515534 | GGCTGATTGTAATGGGGAGTATCAT | 60.516 | 44.000 | 0.00 | 0.00 | 36.25 | 2.45 |
2712 | 3628 | 6.296432 | GGCTGATTGTAATGGGGAGTATCATA | 60.296 | 42.308 | 0.00 | 0.00 | 36.25 | 2.15 |
2713 | 3629 | 7.341805 | GCTGATTGTAATGGGGAGTATCATAT | 58.658 | 38.462 | 0.00 | 0.00 | 36.25 | 1.78 |
2714 | 3630 | 8.486210 | GCTGATTGTAATGGGGAGTATCATATA | 58.514 | 37.037 | 0.00 | 0.00 | 36.25 | 0.86 |
2715 | 3631 | 9.823647 | CTGATTGTAATGGGGAGTATCATATAC | 57.176 | 37.037 | 0.00 | 0.00 | 36.25 | 1.47 |
2716 | 3632 | 9.560860 | TGATTGTAATGGGGAGTATCATATACT | 57.439 | 33.333 | 0.00 | 0.00 | 36.25 | 2.12 |
2725 | 3641 | 9.868160 | TGGGGAGTATCATATACTAGTATCATG | 57.132 | 37.037 | 18.68 | 17.93 | 36.25 | 3.07 |
2726 | 3642 | 8.798402 | GGGGAGTATCATATACTAGTATCATGC | 58.202 | 40.741 | 18.68 | 12.34 | 36.25 | 4.06 |
2727 | 3643 | 9.355916 | GGGAGTATCATATACTAGTATCATGCA | 57.644 | 37.037 | 18.68 | 1.71 | 36.25 | 3.96 |
2763 | 3679 | 8.924303 | AGTGTATGATACTACCTCTTTAATGCA | 58.076 | 33.333 | 4.03 | 0.00 | 0.00 | 3.96 |
2764 | 3680 | 9.712305 | GTGTATGATACTACCTCTTTAATGCAT | 57.288 | 33.333 | 4.03 | 0.00 | 0.00 | 3.96 |
2808 | 3724 | 9.710900 | TCATGTAGTACTCTATTTATTGCCATG | 57.289 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
2809 | 3725 | 7.962964 | TGTAGTACTCTATTTATTGCCATGC | 57.037 | 36.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2810 | 3726 | 7.505258 | TGTAGTACTCTATTTATTGCCATGCA | 58.495 | 34.615 | 0.00 | 0.00 | 36.47 | 3.96 |
2811 | 3727 | 8.156820 | TGTAGTACTCTATTTATTGCCATGCAT | 58.843 | 33.333 | 0.00 | 0.00 | 38.76 | 3.96 |
2812 | 3728 | 7.444629 | AGTACTCTATTTATTGCCATGCATG | 57.555 | 36.000 | 20.19 | 20.19 | 38.76 | 4.06 |
2813 | 3729 | 7.226441 | AGTACTCTATTTATTGCCATGCATGA | 58.774 | 34.615 | 28.31 | 8.76 | 38.76 | 3.07 |
2814 | 3730 | 6.323203 | ACTCTATTTATTGCCATGCATGAC | 57.677 | 37.500 | 28.31 | 17.77 | 38.76 | 3.06 |
2815 | 3731 | 5.829391 | ACTCTATTTATTGCCATGCATGACA | 59.171 | 36.000 | 28.31 | 20.53 | 38.76 | 3.58 |
2816 | 3732 | 6.075762 | TCTATTTATTGCCATGCATGACAC | 57.924 | 37.500 | 28.31 | 16.49 | 38.76 | 3.67 |
2817 | 3733 | 4.739587 | ATTTATTGCCATGCATGACACA | 57.260 | 36.364 | 28.31 | 18.81 | 38.76 | 3.72 |
2818 | 3734 | 4.532314 | TTTATTGCCATGCATGACACAA | 57.468 | 36.364 | 28.31 | 25.14 | 38.76 | 3.33 |
2819 | 3735 | 4.532314 | TTATTGCCATGCATGACACAAA | 57.468 | 36.364 | 28.31 | 15.45 | 38.76 | 2.83 |
2820 | 3736 | 2.442212 | TTGCCATGCATGACACAAAG | 57.558 | 45.000 | 28.31 | 10.23 | 38.76 | 2.77 |
2821 | 3737 | 1.330234 | TGCCATGCATGACACAAAGT | 58.670 | 45.000 | 28.31 | 0.00 | 31.71 | 2.66 |
2822 | 3738 | 2.512705 | TGCCATGCATGACACAAAGTA | 58.487 | 42.857 | 28.31 | 5.91 | 31.71 | 2.24 |
2823 | 3739 | 2.488937 | TGCCATGCATGACACAAAGTAG | 59.511 | 45.455 | 28.31 | 8.01 | 31.71 | 2.57 |
2824 | 3740 | 2.733227 | GCCATGCATGACACAAAGTAGC | 60.733 | 50.000 | 28.31 | 14.15 | 0.00 | 3.58 |
2825 | 3741 | 2.488937 | CCATGCATGACACAAAGTAGCA | 59.511 | 45.455 | 28.31 | 0.00 | 37.13 | 3.49 |
2826 | 3742 | 3.129813 | CCATGCATGACACAAAGTAGCAT | 59.870 | 43.478 | 28.31 | 0.00 | 41.24 | 3.79 |
2827 | 3743 | 4.336153 | CCATGCATGACACAAAGTAGCATA | 59.664 | 41.667 | 28.31 | 0.00 | 39.67 | 3.14 |
2828 | 3744 | 5.505159 | CCATGCATGACACAAAGTAGCATAG | 60.505 | 44.000 | 28.31 | 0.74 | 39.67 | 2.23 |
2829 | 3745 | 3.374988 | TGCATGACACAAAGTAGCATAGC | 59.625 | 43.478 | 0.00 | 0.00 | 30.65 | 2.97 |
2830 | 3746 | 3.374988 | GCATGACACAAAGTAGCATAGCA | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
2831 | 3747 | 4.036027 | GCATGACACAAAGTAGCATAGCAT | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
2832 | 3748 | 5.449588 | GCATGACACAAAGTAGCATAGCATT | 60.450 | 40.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2833 | 3749 | 6.558009 | CATGACACAAAGTAGCATAGCATTT | 58.442 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2834 | 3750 | 7.679400 | GCATGACACAAAGTAGCATAGCATTTA | 60.679 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2835 | 3751 | 7.864108 | TGACACAAAGTAGCATAGCATTTAT | 57.136 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2836 | 3752 | 8.279970 | TGACACAAAGTAGCATAGCATTTATT | 57.720 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2837 | 3753 | 9.389755 | TGACACAAAGTAGCATAGCATTTATTA | 57.610 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2845 | 3761 | 9.534565 | AGTAGCATAGCATTTATTATGATACGG | 57.465 | 33.333 | 11.77 | 0.00 | 46.16 | 4.02 |
2846 | 3762 | 9.314321 | GTAGCATAGCATTTATTATGATACGGT | 57.686 | 33.333 | 4.73 | 0.00 | 38.55 | 4.83 |
2871 | 3787 | 5.908590 | TCATGATATGATACTCCACCCTCT | 58.091 | 41.667 | 0.00 | 0.00 | 33.59 | 3.69 |
2872 | 3788 | 5.954752 | TCATGATATGATACTCCACCCTCTC | 59.045 | 44.000 | 0.00 | 0.00 | 33.59 | 3.20 |
2873 | 3789 | 5.607168 | TGATATGATACTCCACCCTCTCT | 57.393 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
2874 | 3790 | 5.970289 | TGATATGATACTCCACCCTCTCTT | 58.030 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
2875 | 3791 | 6.385443 | TGATATGATACTCCACCCTCTCTTT | 58.615 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2876 | 3792 | 6.495181 | TGATATGATACTCCACCCTCTCTTTC | 59.505 | 42.308 | 0.00 | 0.00 | 0.00 | 2.62 |
2877 | 3793 | 4.338795 | TGATACTCCACCCTCTCTTTCT | 57.661 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2878 | 3794 | 4.689062 | TGATACTCCACCCTCTCTTTCTT | 58.311 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
2879 | 3795 | 4.712337 | TGATACTCCACCCTCTCTTTCTTC | 59.288 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
2880 | 3796 | 2.977808 | ACTCCACCCTCTCTTTCTTCA | 58.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2881 | 3797 | 3.525862 | ACTCCACCCTCTCTTTCTTCAT | 58.474 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2882 | 3798 | 3.913163 | ACTCCACCCTCTCTTTCTTCATT | 59.087 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2883 | 3799 | 4.352298 | ACTCCACCCTCTCTTTCTTCATTT | 59.648 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
2884 | 3800 | 5.548056 | ACTCCACCCTCTCTTTCTTCATTTA | 59.452 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2885 | 3801 | 6.044404 | ACTCCACCCTCTCTTTCTTCATTTAA | 59.956 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
2886 | 3802 | 7.032598 | TCCACCCTCTCTTTCTTCATTTAAT | 57.967 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2887 | 3803 | 6.886459 | TCCACCCTCTCTTTCTTCATTTAATG | 59.114 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
2888 | 3804 | 6.405176 | CCACCCTCTCTTTCTTCATTTAATGC | 60.405 | 42.308 | 0.00 | 0.00 | 0.00 | 3.56 |
2889 | 3805 | 6.376581 | CACCCTCTCTTTCTTCATTTAATGCT | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
2890 | 3806 | 7.554118 | CACCCTCTCTTTCTTCATTTAATGCTA | 59.446 | 37.037 | 0.00 | 0.00 | 0.00 | 3.49 |
2891 | 3807 | 8.277918 | ACCCTCTCTTTCTTCATTTAATGCTAT | 58.722 | 33.333 | 0.00 | 0.00 | 0.00 | 2.97 |
2892 | 3808 | 8.566260 | CCCTCTCTTTCTTCATTTAATGCTATG | 58.434 | 37.037 | 0.00 | 0.00 | 0.00 | 2.23 |
2893 | 3809 | 9.334947 | CCTCTCTTTCTTCATTTAATGCTATGA | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
2895 | 3811 | 9.671279 | TCTCTTTCTTCATTTAATGCTATGACA | 57.329 | 29.630 | 0.00 | 0.00 | 30.89 | 3.58 |
2896 | 3812 | 9.713740 | CTCTTTCTTCATTTAATGCTATGACAC | 57.286 | 33.333 | 0.00 | 0.00 | 30.89 | 3.67 |
2897 | 3813 | 8.677300 | TCTTTCTTCATTTAATGCTATGACACC | 58.323 | 33.333 | 0.00 | 0.00 | 30.89 | 4.16 |
2898 | 3814 | 8.579850 | TTTCTTCATTTAATGCTATGACACCT | 57.420 | 30.769 | 0.00 | 0.00 | 30.89 | 4.00 |
2899 | 3815 | 8.579850 | TTCTTCATTTAATGCTATGACACCTT | 57.420 | 30.769 | 0.00 | 0.00 | 30.89 | 3.50 |
2900 | 3816 | 9.679661 | TTCTTCATTTAATGCTATGACACCTTA | 57.320 | 29.630 | 0.00 | 0.00 | 30.89 | 2.69 |
2901 | 3817 | 9.851686 | TCTTCATTTAATGCTATGACACCTTAT | 57.148 | 29.630 | 0.00 | 0.00 | 30.89 | 1.73 |
2903 | 3819 | 9.625747 | TTCATTTAATGCTATGACACCTTATCA | 57.374 | 29.630 | 0.00 | 0.00 | 30.89 | 2.15 |
2904 | 3820 | 9.625747 | TCATTTAATGCTATGACACCTTATCAA | 57.374 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2910 | 3826 | 6.563422 | TGCTATGACACCTTATCAAAATTGC | 58.437 | 36.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2911 | 3827 | 5.979517 | GCTATGACACCTTATCAAAATTGCC | 59.020 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2912 | 3828 | 6.183360 | GCTATGACACCTTATCAAAATTGCCT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 4.75 |
2913 | 3829 | 7.013274 | GCTATGACACCTTATCAAAATTGCCTA | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 3.93 |
2914 | 3830 | 6.757897 | TGACACCTTATCAAAATTGCCTAG | 57.242 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
2915 | 3831 | 6.245408 | TGACACCTTATCAAAATTGCCTAGT | 58.755 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2916 | 3832 | 6.719370 | TGACACCTTATCAAAATTGCCTAGTT | 59.281 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
2917 | 3833 | 6.924111 | ACACCTTATCAAAATTGCCTAGTTG | 58.076 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2918 | 3834 | 6.071391 | ACACCTTATCAAAATTGCCTAGTTGG | 60.071 | 38.462 | 0.00 | 0.00 | 39.35 | 3.77 |
2931 | 3847 | 3.748083 | CCTAGTTGGCATGCATGATACT | 58.252 | 45.455 | 30.64 | 26.11 | 0.00 | 2.12 |
2932 | 3848 | 4.898320 | CCTAGTTGGCATGCATGATACTA | 58.102 | 43.478 | 30.64 | 25.87 | 0.00 | 1.82 |
2933 | 3849 | 4.934001 | CCTAGTTGGCATGCATGATACTAG | 59.066 | 45.833 | 31.40 | 31.40 | 36.03 | 2.57 |
2934 | 3850 | 3.144506 | AGTTGGCATGCATGATACTAGC | 58.855 | 45.455 | 30.64 | 12.56 | 0.00 | 3.42 |
2935 | 3851 | 3.144506 | GTTGGCATGCATGATACTAGCT | 58.855 | 45.455 | 30.64 | 0.00 | 0.00 | 3.32 |
2936 | 3852 | 4.040829 | AGTTGGCATGCATGATACTAGCTA | 59.959 | 41.667 | 30.64 | 7.90 | 0.00 | 3.32 |
2937 | 3853 | 4.831674 | TGGCATGCATGATACTAGCTAT | 57.168 | 40.909 | 30.64 | 0.00 | 0.00 | 2.97 |
2938 | 3854 | 4.510571 | TGGCATGCATGATACTAGCTATG | 58.489 | 43.478 | 30.64 | 0.23 | 0.00 | 2.23 |
2939 | 3855 | 4.223477 | TGGCATGCATGATACTAGCTATGA | 59.777 | 41.667 | 30.64 | 0.00 | 0.00 | 2.15 |
2940 | 3856 | 5.104652 | TGGCATGCATGATACTAGCTATGAT | 60.105 | 40.000 | 30.64 | 0.00 | 0.00 | 2.45 |
2941 | 3857 | 6.098695 | TGGCATGCATGATACTAGCTATGATA | 59.901 | 38.462 | 30.64 | 0.00 | 0.00 | 2.15 |
2942 | 3858 | 6.423302 | GGCATGCATGATACTAGCTATGATAC | 59.577 | 42.308 | 30.64 | 5.71 | 0.00 | 2.24 |
2943 | 3859 | 7.208777 | GCATGCATGATACTAGCTATGATACT | 58.791 | 38.462 | 30.64 | 0.00 | 0.00 | 2.12 |
2944 | 3860 | 8.355913 | GCATGCATGATACTAGCTATGATACTA | 58.644 | 37.037 | 30.64 | 0.00 | 0.00 | 1.82 |
2945 | 3861 | 9.676195 | CATGCATGATACTAGCTATGATACTAC | 57.324 | 37.037 | 22.59 | 0.00 | 0.00 | 2.73 |
2946 | 3862 | 8.226819 | TGCATGATACTAGCTATGATACTACC | 57.773 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
2947 | 3863 | 7.834181 | TGCATGATACTAGCTATGATACTACCA | 59.166 | 37.037 | 0.00 | 0.00 | 0.00 | 3.25 |
2948 | 3864 | 8.855110 | GCATGATACTAGCTATGATACTACCAT | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
2954 | 3870 | 8.266392 | ACTAGCTATGATACTACCATTACGAC | 57.734 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
2955 | 3871 | 6.512342 | AGCTATGATACTACCATTACGACC | 57.488 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2956 | 3872 | 6.008331 | AGCTATGATACTACCATTACGACCA | 58.992 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2957 | 3873 | 6.151312 | AGCTATGATACTACCATTACGACCAG | 59.849 | 42.308 | 0.00 | 0.00 | 0.00 | 4.00 |
2958 | 3874 | 4.579454 | TGATACTACCATTACGACCAGC | 57.421 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
2959 | 3875 | 3.319972 | TGATACTACCATTACGACCAGCC | 59.680 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
2960 | 3876 | 1.861982 | ACTACCATTACGACCAGCCT | 58.138 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2961 | 3877 | 3.022557 | ACTACCATTACGACCAGCCTA | 57.977 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
2962 | 3878 | 3.368248 | ACTACCATTACGACCAGCCTAA | 58.632 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2963 | 3879 | 2.981859 | ACCATTACGACCAGCCTAAG | 57.018 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
2964 | 3880 | 1.485066 | ACCATTACGACCAGCCTAAGG | 59.515 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
2965 | 3881 | 1.202651 | CCATTACGACCAGCCTAAGGG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.95 |
2987 | 3903 | 4.454504 | GGCAACGAGTTCCTTCTTCAATAA | 59.545 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
2997 | 3913 | 8.437575 | AGTTCCTTCTTCAATAACTTCTACCAA | 58.562 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
3032 | 3948 | 2.094894 | GTGCTGATGTGAATGTTCCTCG | 59.905 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3051 | 3967 | 2.364002 | TCGGGACAAGATCATATGCGAA | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
3054 | 3970 | 4.318332 | GGGACAAGATCATATGCGAATGA | 58.682 | 43.478 | 0.00 | 3.54 | 40.07 | 2.57 |
3093 | 4009 | 2.750166 | CAAGAGCTTCGAGTAGAGTGGA | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3096 | 4012 | 3.630312 | AGAGCTTCGAGTAGAGTGGAATC | 59.370 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
3103 | 4019 | 3.201290 | GAGTAGAGTGGAATCCGTCGTA | 58.799 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3114 | 4030 | 4.393990 | GGAATCCGTCGTACCTTCAAAAAT | 59.606 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
3121 | 4037 | 5.220340 | CGTCGTACCTTCAAAAATAATCGCT | 60.220 | 40.000 | 0.00 | 0.00 | 0.00 | 4.93 |
3144 | 4060 | 2.490903 | GGGATCCAAGATATGCACATGC | 59.509 | 50.000 | 15.23 | 0.00 | 42.50 | 4.06 |
3146 | 4062 | 4.566278 | GGGATCCAAGATATGCACATGCTA | 60.566 | 45.833 | 15.23 | 0.00 | 42.66 | 3.49 |
3147 | 4063 | 5.005740 | GGATCCAAGATATGCACATGCTAA | 58.994 | 41.667 | 6.95 | 0.00 | 42.66 | 3.09 |
3159 | 4075 | 3.186817 | GCACATGCTAATCTCTGCAGATC | 59.813 | 47.826 | 18.63 | 3.35 | 42.74 | 2.75 |
3164 | 4080 | 2.612471 | GCTAATCTCTGCAGATCGCCAT | 60.612 | 50.000 | 18.63 | 3.51 | 38.55 | 4.40 |
3171 | 4087 | 1.314534 | TGCAGATCGCCATTGTTGGG | 61.315 | 55.000 | 7.00 | 0.00 | 43.84 | 4.12 |
3172 | 4088 | 1.315257 | GCAGATCGCCATTGTTGGGT | 61.315 | 55.000 | 0.00 | 0.00 | 43.84 | 4.51 |
3173 | 4089 | 1.176527 | CAGATCGCCATTGTTGGGTT | 58.823 | 50.000 | 0.00 | 0.00 | 43.84 | 4.11 |
3174 | 4090 | 2.364632 | CAGATCGCCATTGTTGGGTTA | 58.635 | 47.619 | 0.00 | 0.00 | 43.84 | 2.85 |
3175 | 4091 | 2.951642 | CAGATCGCCATTGTTGGGTTAT | 59.048 | 45.455 | 0.00 | 0.00 | 43.84 | 1.89 |
3176 | 4092 | 2.951642 | AGATCGCCATTGTTGGGTTATG | 59.048 | 45.455 | 0.00 | 0.00 | 43.84 | 1.90 |
3177 | 4093 | 1.468985 | TCGCCATTGTTGGGTTATGG | 58.531 | 50.000 | 0.00 | 0.00 | 43.84 | 2.74 |
3180 | 4096 | 0.179113 | CCATTGTTGGGTTATGGCGC | 60.179 | 55.000 | 0.00 | 0.00 | 39.56 | 6.53 |
3181 | 4097 | 0.179113 | CATTGTTGGGTTATGGCGCC | 60.179 | 55.000 | 22.73 | 22.73 | 0.00 | 6.53 |
3182 | 4098 | 0.613292 | ATTGTTGGGTTATGGCGCCA | 60.613 | 50.000 | 34.80 | 34.80 | 0.00 | 5.69 |
3183 | 4099 | 0.613292 | TTGTTGGGTTATGGCGCCAT | 60.613 | 50.000 | 41.28 | 41.28 | 40.19 | 4.40 |
3184 | 4100 | 1.034838 | TGTTGGGTTATGGCGCCATC | 61.035 | 55.000 | 43.60 | 29.82 | 37.82 | 3.51 |
3185 | 4101 | 1.454847 | TTGGGTTATGGCGCCATCC | 60.455 | 57.895 | 43.60 | 36.08 | 37.82 | 3.51 |
3186 | 4102 | 2.194597 | GGGTTATGGCGCCATCCA | 59.805 | 61.111 | 43.60 | 28.85 | 40.97 | 3.41 |
3188 | 4104 | 1.526575 | GGGTTATGGCGCCATCCATG | 61.527 | 60.000 | 43.60 | 0.00 | 45.84 | 3.66 |
3189 | 4105 | 0.823356 | GGTTATGGCGCCATCCATGT | 60.823 | 55.000 | 43.60 | 24.04 | 45.84 | 3.21 |
3190 | 4106 | 1.032014 | GTTATGGCGCCATCCATGTT | 58.968 | 50.000 | 43.60 | 23.24 | 45.84 | 2.71 |
3191 | 4107 | 1.031235 | TTATGGCGCCATCCATGTTG | 58.969 | 50.000 | 43.60 | 0.00 | 45.84 | 3.33 |
3192 | 4108 | 1.454572 | TATGGCGCCATCCATGTTGC | 61.455 | 55.000 | 43.60 | 4.89 | 45.84 | 4.17 |
3193 | 4109 | 3.142838 | GGCGCCATCCATGTTGCT | 61.143 | 61.111 | 24.80 | 0.00 | 0.00 | 3.91 |
3194 | 4110 | 2.713967 | GGCGCCATCCATGTTGCTT | 61.714 | 57.895 | 24.80 | 0.00 | 0.00 | 3.91 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 6.479884 | AGACATCTTGCCCTTGATTATATCC | 58.520 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
45 | 46 | 0.463654 | AACTGGCTCAGCAACGAACA | 60.464 | 50.000 | 0.00 | 0.00 | 34.37 | 3.18 |
63 | 64 | 1.363145 | GGCATGTACACGCGCCTTAA | 61.363 | 55.000 | 20.32 | 0.00 | 41.50 | 1.85 |
73 | 74 | 3.326578 | AGCACCGGGGCATGTACA | 61.327 | 61.111 | 34.08 | 0.00 | 35.83 | 2.90 |
74 | 75 | 2.824041 | CAGCACCGGGGCATGTAC | 60.824 | 66.667 | 34.08 | 0.00 | 35.83 | 2.90 |
128 | 129 | 1.146358 | GAGAACGCACCATCTACCGC | 61.146 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
133 | 134 | 1.513158 | CTCCGAGAACGCACCATCT | 59.487 | 57.895 | 0.00 | 0.00 | 38.29 | 2.90 |
169 | 170 | 4.864334 | CTCAGCACCATCCCCGCC | 62.864 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
231 | 232 | 0.388907 | TAGGGCGTCGTTGCAGTTAC | 60.389 | 55.000 | 0.00 | 0.00 | 36.28 | 2.50 |
307 | 308 | 4.017958 | TCAGTTTGGACAATAATAGGCCCA | 60.018 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
328 | 329 | 3.511699 | CATGAGAGTTTCCGACGAATCA | 58.488 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
337 | 338 | 1.808411 | TCAACGCCATGAGAGTTTCC | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
341 | 342 | 1.066573 | CCTCTTCAACGCCATGAGAGT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
344 | 345 | 0.250234 | TCCCTCTTCAACGCCATGAG | 59.750 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
358 | 359 | 3.304794 | CGGAGTATCGAAGATTGTCCCTC | 60.305 | 52.174 | 0.00 | 0.00 | 45.12 | 4.30 |
359 | 360 | 2.623889 | CGGAGTATCGAAGATTGTCCCT | 59.376 | 50.000 | 0.00 | 0.00 | 45.12 | 4.20 |
407 | 408 | 0.034896 | CTTACACCCACGTGCCTCTT | 59.965 | 55.000 | 10.91 | 0.00 | 44.40 | 2.85 |
416 | 417 | 5.878669 | ACGGAATAAATTCTCTTACACCCAC | 59.121 | 40.000 | 2.91 | 0.00 | 37.00 | 4.61 |
430 | 431 | 5.163794 | ACGCTTGATTTTCGACGGAATAAAT | 60.164 | 36.000 | 0.00 | 0.00 | 30.88 | 1.40 |
448 | 449 | 3.915437 | ACCCTGTTTTATTCACGCTTG | 57.085 | 42.857 | 0.00 | 0.00 | 0.00 | 4.01 |
458 | 459 | 5.116180 | CAATCGATCTGCTACCCTGTTTTA | 58.884 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
495 | 496 | 6.948886 | CCATACAGTAGTGGTACTCTCCATAT | 59.051 | 42.308 | 1.92 | 0.00 | 37.40 | 1.78 |
498 | 499 | 4.533815 | CCATACAGTAGTGGTACTCTCCA | 58.466 | 47.826 | 1.92 | 0.00 | 37.40 | 3.86 |
559 | 560 | 6.404734 | CCAAGATCACAGGGTTACAATTAAGC | 60.405 | 42.308 | 0.00 | 0.00 | 35.32 | 3.09 |
563 | 564 | 5.255397 | TCCAAGATCACAGGGTTACAATT | 57.745 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
580 | 581 | 7.968405 | CGTGGGTAAAAGAGATTTTATTCCAAG | 59.032 | 37.037 | 14.40 | 13.31 | 35.95 | 3.61 |
616 | 617 | 5.394802 | TGCAACGCACGATACATTTTAATT | 58.605 | 33.333 | 0.00 | 0.00 | 31.71 | 1.40 |
620 | 621 | 2.979401 | TGCAACGCACGATACATTTT | 57.021 | 40.000 | 0.00 | 0.00 | 31.71 | 1.82 |
637 | 638 | 4.331962 | GCTATTAGTAAGTTTGCACGTGC | 58.668 | 43.478 | 33.11 | 33.11 | 42.50 | 5.34 |
638 | 639 | 4.630069 | AGGCTATTAGTAAGTTTGCACGTG | 59.370 | 41.667 | 12.28 | 12.28 | 0.00 | 4.49 |
639 | 640 | 4.828829 | AGGCTATTAGTAAGTTTGCACGT | 58.171 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
640 | 641 | 6.897259 | TTAGGCTATTAGTAAGTTTGCACG | 57.103 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
641 | 642 | 9.503427 | CATTTTAGGCTATTAGTAAGTTTGCAC | 57.497 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
642 | 643 | 9.456147 | TCATTTTAGGCTATTAGTAAGTTTGCA | 57.544 | 29.630 | 0.00 | 0.00 | 0.00 | 4.08 |
643 | 644 | 9.937175 | CTCATTTTAGGCTATTAGTAAGTTTGC | 57.063 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
659 | 660 | 3.382546 | CCATCCAGTTGCCTCATTTTAGG | 59.617 | 47.826 | 0.00 | 0.00 | 39.87 | 2.69 |
660 | 661 | 3.181483 | GCCATCCAGTTGCCTCATTTTAG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
661 | 662 | 2.760092 | GCCATCCAGTTGCCTCATTTTA | 59.240 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
662 | 663 | 1.551883 | GCCATCCAGTTGCCTCATTTT | 59.448 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
663 | 664 | 1.188863 | GCCATCCAGTTGCCTCATTT | 58.811 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
664 | 665 | 1.033746 | CGCCATCCAGTTGCCTCATT | 61.034 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
665 | 666 | 1.452651 | CGCCATCCAGTTGCCTCAT | 60.453 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
666 | 667 | 2.046023 | CGCCATCCAGTTGCCTCA | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
667 | 668 | 2.825836 | CCGCCATCCAGTTGCCTC | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
685 | 686 | 2.584418 | CGAGATCTGTGCCTGCGG | 60.584 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
686 | 687 | 3.260483 | GCGAGATCTGTGCCTGCG | 61.260 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
687 | 688 | 2.894387 | GGCGAGATCTGTGCCTGC | 60.894 | 66.667 | 22.60 | 7.86 | 45.40 | 4.85 |
691 | 692 | 2.887568 | CGGTGGCGAGATCTGTGC | 60.888 | 66.667 | 0.00 | 3.65 | 0.00 | 4.57 |
692 | 693 | 2.021068 | ATCCGGTGGCGAGATCTGTG | 62.021 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
693 | 694 | 1.739338 | GATCCGGTGGCGAGATCTGT | 61.739 | 60.000 | 0.00 | 0.00 | 34.78 | 3.41 |
694 | 695 | 1.006805 | GATCCGGTGGCGAGATCTG | 60.007 | 63.158 | 0.00 | 0.00 | 34.78 | 2.90 |
695 | 696 | 1.043116 | TTGATCCGGTGGCGAGATCT | 61.043 | 55.000 | 0.00 | 0.00 | 37.80 | 2.75 |
696 | 697 | 0.598680 | CTTGATCCGGTGGCGAGATC | 60.599 | 60.000 | 0.00 | 0.00 | 37.51 | 2.75 |
697 | 698 | 1.330655 | ACTTGATCCGGTGGCGAGAT | 61.331 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
698 | 699 | 1.982395 | ACTTGATCCGGTGGCGAGA | 60.982 | 57.895 | 0.00 | 0.00 | 0.00 | 4.04 |
699 | 700 | 1.811266 | CACTTGATCCGGTGGCGAG | 60.811 | 63.158 | 0.00 | 4.03 | 0.00 | 5.03 |
700 | 701 | 2.264480 | CACTTGATCCGGTGGCGA | 59.736 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
701 | 702 | 3.499737 | GCACTTGATCCGGTGGCG | 61.500 | 66.667 | 0.00 | 0.00 | 34.41 | 5.69 |
702 | 703 | 3.499737 | CGCACTTGATCCGGTGGC | 61.500 | 66.667 | 0.00 | 7.80 | 34.41 | 5.01 |
703 | 704 | 2.047274 | ACGCACTTGATCCGGTGG | 60.047 | 61.111 | 0.00 | 8.66 | 34.41 | 4.61 |
704 | 705 | 3.027170 | GCACGCACTTGATCCGGTG | 62.027 | 63.158 | 0.00 | 9.82 | 36.62 | 4.94 |
705 | 706 | 2.742372 | GCACGCACTTGATCCGGT | 60.742 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
706 | 707 | 3.499737 | GGCACGCACTTGATCCGG | 61.500 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
707 | 708 | 2.741985 | TGGCACGCACTTGATCCG | 60.742 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
708 | 709 | 2.690778 | GGTGGCACGCACTTGATCC | 61.691 | 63.158 | 12.17 | 0.00 | 43.02 | 3.36 |
709 | 710 | 2.870372 | GGTGGCACGCACTTGATC | 59.130 | 61.111 | 12.17 | 0.00 | 43.02 | 2.92 |
710 | 711 | 3.049674 | CGGTGGCACGCACTTGAT | 61.050 | 61.111 | 12.17 | 0.00 | 43.02 | 2.57 |
711 | 712 | 4.539083 | ACGGTGGCACGCACTTGA | 62.539 | 61.111 | 12.17 | 0.00 | 43.02 | 3.02 |
712 | 713 | 4.312231 | CACGGTGGCACGCACTTG | 62.312 | 66.667 | 12.17 | 0.00 | 43.02 | 3.16 |
715 | 716 | 4.973055 | TACCACGGTGGCACGCAC | 62.973 | 66.667 | 26.62 | 0.00 | 42.67 | 5.34 |
716 | 717 | 4.973055 | GTACCACGGTGGCACGCA | 62.973 | 66.667 | 26.62 | 4.61 | 42.67 | 5.24 |
717 | 718 | 4.973055 | TGTACCACGGTGGCACGC | 62.973 | 66.667 | 26.62 | 14.15 | 42.67 | 5.34 |
718 | 719 | 3.039588 | GTGTACCACGGTGGCACG | 61.040 | 66.667 | 26.62 | 9.61 | 42.67 | 5.34 |
727 | 728 | 5.690409 | ACAATGATAATCGATCGTGTACCAC | 59.310 | 40.000 | 15.94 | 3.19 | 37.38 | 4.16 |
728 | 729 | 5.838529 | ACAATGATAATCGATCGTGTACCA | 58.161 | 37.500 | 15.94 | 6.18 | 37.38 | 3.25 |
729 | 730 | 6.128902 | GGAACAATGATAATCGATCGTGTACC | 60.129 | 42.308 | 15.94 | 0.06 | 35.44 | 3.34 |
730 | 731 | 6.419710 | TGGAACAATGATAATCGATCGTGTAC | 59.580 | 38.462 | 15.94 | 6.89 | 35.44 | 2.90 |
731 | 732 | 6.508777 | TGGAACAATGATAATCGATCGTGTA | 58.491 | 36.000 | 15.94 | 8.87 | 35.44 | 2.90 |
732 | 733 | 5.356426 | TGGAACAATGATAATCGATCGTGT | 58.644 | 37.500 | 15.94 | 6.46 | 37.13 | 4.49 |
733 | 734 | 5.905480 | TGGAACAATGATAATCGATCGTG | 57.095 | 39.130 | 15.94 | 5.77 | 33.65 | 4.35 |
742 | 743 | 7.860373 | GCTTAACGCATAATGGAACAATGATAA | 59.140 | 33.333 | 0.00 | 0.00 | 39.93 | 1.75 |
743 | 744 | 7.228507 | AGCTTAACGCATAATGGAACAATGATA | 59.771 | 33.333 | 0.00 | 0.00 | 42.24 | 2.15 |
744 | 745 | 6.039717 | AGCTTAACGCATAATGGAACAATGAT | 59.960 | 34.615 | 0.00 | 0.00 | 42.24 | 2.45 |
745 | 746 | 5.356751 | AGCTTAACGCATAATGGAACAATGA | 59.643 | 36.000 | 0.00 | 0.00 | 42.24 | 2.57 |
746 | 747 | 5.581605 | AGCTTAACGCATAATGGAACAATG | 58.418 | 37.500 | 0.00 | 0.00 | 42.24 | 2.82 |
747 | 748 | 5.835113 | AGCTTAACGCATAATGGAACAAT | 57.165 | 34.783 | 0.00 | 0.00 | 42.24 | 2.71 |
748 | 749 | 5.637006 | AAGCTTAACGCATAATGGAACAA | 57.363 | 34.783 | 0.00 | 0.00 | 42.24 | 2.83 |
749 | 750 | 5.878116 | ACTAAGCTTAACGCATAATGGAACA | 59.122 | 36.000 | 7.74 | 0.00 | 43.03 | 3.18 |
750 | 751 | 6.258068 | AGACTAAGCTTAACGCATAATGGAAC | 59.742 | 38.462 | 7.74 | 0.00 | 42.61 | 3.62 |
751 | 752 | 6.346096 | AGACTAAGCTTAACGCATAATGGAA | 58.654 | 36.000 | 7.74 | 0.00 | 42.61 | 3.53 |
752 | 753 | 5.914033 | AGACTAAGCTTAACGCATAATGGA | 58.086 | 37.500 | 7.74 | 0.00 | 42.61 | 3.41 |
753 | 754 | 6.924060 | ACTAGACTAAGCTTAACGCATAATGG | 59.076 | 38.462 | 7.74 | 0.00 | 42.61 | 3.16 |
754 | 755 | 7.648112 | TGACTAGACTAAGCTTAACGCATAATG | 59.352 | 37.037 | 7.74 | 0.00 | 42.61 | 1.90 |
755 | 756 | 7.648510 | GTGACTAGACTAAGCTTAACGCATAAT | 59.351 | 37.037 | 7.74 | 0.00 | 42.61 | 1.28 |
756 | 757 | 6.971184 | GTGACTAGACTAAGCTTAACGCATAA | 59.029 | 38.462 | 7.74 | 0.00 | 42.61 | 1.90 |
757 | 758 | 6.318144 | AGTGACTAGACTAAGCTTAACGCATA | 59.682 | 38.462 | 7.74 | 0.00 | 42.61 | 3.14 |
758 | 759 | 5.125739 | AGTGACTAGACTAAGCTTAACGCAT | 59.874 | 40.000 | 7.74 | 0.00 | 42.61 | 4.73 |
759 | 760 | 4.458295 | AGTGACTAGACTAAGCTTAACGCA | 59.542 | 41.667 | 7.74 | 0.00 | 42.61 | 5.24 |
760 | 761 | 4.794246 | CAGTGACTAGACTAAGCTTAACGC | 59.206 | 45.833 | 7.74 | 0.01 | 39.57 | 4.84 |
761 | 762 | 6.022821 | GTCAGTGACTAGACTAAGCTTAACG | 58.977 | 44.000 | 16.26 | 0.00 | 0.00 | 3.18 |
762 | 763 | 6.151480 | AGGTCAGTGACTAGACTAAGCTTAAC | 59.849 | 42.308 | 22.18 | 5.06 | 35.18 | 2.01 |
763 | 764 | 6.246919 | AGGTCAGTGACTAGACTAAGCTTAA | 58.753 | 40.000 | 22.18 | 0.00 | 35.18 | 1.85 |
764 | 765 | 5.817784 | AGGTCAGTGACTAGACTAAGCTTA | 58.182 | 41.667 | 22.18 | 5.94 | 35.18 | 3.09 |
765 | 766 | 4.668636 | AGGTCAGTGACTAGACTAAGCTT | 58.331 | 43.478 | 22.18 | 3.48 | 35.18 | 3.74 |
766 | 767 | 4.310022 | AGGTCAGTGACTAGACTAAGCT | 57.690 | 45.455 | 22.18 | 5.26 | 35.18 | 3.74 |
767 | 768 | 4.703093 | AGAAGGTCAGTGACTAGACTAAGC | 59.297 | 45.833 | 22.18 | 2.96 | 35.18 | 3.09 |
768 | 769 | 5.941058 | TCAGAAGGTCAGTGACTAGACTAAG | 59.059 | 44.000 | 22.18 | 6.25 | 35.18 | 2.18 |
769 | 770 | 5.706369 | GTCAGAAGGTCAGTGACTAGACTAA | 59.294 | 44.000 | 22.18 | 1.84 | 38.06 | 2.24 |
770 | 771 | 5.221864 | TGTCAGAAGGTCAGTGACTAGACTA | 60.222 | 44.000 | 22.18 | 10.72 | 41.06 | 2.59 |
771 | 772 | 4.076394 | GTCAGAAGGTCAGTGACTAGACT | 58.924 | 47.826 | 22.18 | 13.33 | 38.06 | 3.24 |
772 | 773 | 3.821600 | TGTCAGAAGGTCAGTGACTAGAC | 59.178 | 47.826 | 22.18 | 19.76 | 41.06 | 2.59 |
773 | 774 | 4.075682 | CTGTCAGAAGGTCAGTGACTAGA | 58.924 | 47.826 | 22.18 | 10.51 | 41.06 | 2.43 |
774 | 775 | 4.075682 | TCTGTCAGAAGGTCAGTGACTAG | 58.924 | 47.826 | 22.18 | 8.53 | 41.06 | 2.57 |
775 | 776 | 4.100279 | TCTGTCAGAAGGTCAGTGACTA | 57.900 | 45.455 | 22.18 | 0.00 | 41.06 | 2.59 |
776 | 777 | 2.950781 | TCTGTCAGAAGGTCAGTGACT | 58.049 | 47.619 | 22.18 | 3.84 | 41.06 | 3.41 |
777 | 778 | 3.951775 | ATCTGTCAGAAGGTCAGTGAC | 57.048 | 47.619 | 15.24 | 15.24 | 40.89 | 3.67 |
778 | 779 | 4.667573 | AGTATCTGTCAGAAGGTCAGTGA | 58.332 | 43.478 | 6.64 | 0.00 | 0.00 | 3.41 |
779 | 780 | 5.047731 | TGAAGTATCTGTCAGAAGGTCAGTG | 60.048 | 44.000 | 6.64 | 0.00 | 0.00 | 3.66 |
785 | 786 | 6.151985 | ACAGTAGTGAAGTATCTGTCAGAAGG | 59.848 | 42.308 | 6.64 | 0.00 | 34.87 | 3.46 |
795 | 796 | 4.516359 | CGCGAGTACAGTAGTGAAGTATC | 58.484 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
831 | 832 | 1.376609 | GGGCCCGTGCTATTTGTCTG | 61.377 | 60.000 | 5.69 | 0.00 | 37.74 | 3.51 |
871 | 872 | 2.381589 | CCGCTCTTGGTTTCGTTTTTC | 58.618 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
874 | 875 | 1.098712 | TGCCGCTCTTGGTTTCGTTT | 61.099 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
891 | 892 | 1.594862 | GGATAGCTGTTCGTCATGTGC | 59.405 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
899 | 900 | 2.141535 | GCTGGTAGGATAGCTGTTCG | 57.858 | 55.000 | 0.00 | 0.00 | 40.38 | 3.95 |
909 | 910 | 3.538614 | GCGGATGAGCTGGTAGGA | 58.461 | 61.111 | 0.00 | 0.00 | 0.00 | 2.94 |
932 | 933 | 6.208994 | GGCAGGTACTTATAGAGCTAGCTAAA | 59.791 | 42.308 | 19.38 | 9.24 | 34.60 | 1.85 |
943 | 944 | 2.429610 | ACACCGTGGCAGGTACTTATAG | 59.570 | 50.000 | 6.43 | 0.00 | 43.89 | 1.31 |
957 | 958 | 0.447801 | GCTTCTTGGCATACACCGTG | 59.552 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
999 | 1000 | 1.654954 | GCTGCTGCTCTGAACCCATG | 61.655 | 60.000 | 8.53 | 0.00 | 36.03 | 3.66 |
1254 | 1279 | 1.618837 | CCGGGGATGTTCGAGATGTAT | 59.381 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
1263 | 1288 | 0.394352 | AGTTCATGCCGGGGATGTTC | 60.394 | 55.000 | 25.20 | 18.80 | 0.00 | 3.18 |
1358 | 1383 | 0.323629 | TTACCAGAAGGCAGGGTTCG | 59.676 | 55.000 | 0.00 | 0.00 | 39.06 | 3.95 |
1408 | 1433 | 0.826715 | GATGGTAGCCTCAGCAGTGA | 59.173 | 55.000 | 0.00 | 0.00 | 43.56 | 3.41 |
1410 | 1435 | 1.504912 | ATGATGGTAGCCTCAGCAGT | 58.495 | 50.000 | 6.10 | 0.00 | 43.56 | 4.40 |
1412 | 1437 | 1.748244 | GCAATGATGGTAGCCTCAGCA | 60.748 | 52.381 | 6.10 | 0.00 | 43.56 | 4.41 |
1413 | 1438 | 0.950116 | GCAATGATGGTAGCCTCAGC | 59.050 | 55.000 | 6.10 | 1.64 | 40.32 | 4.26 |
1491 | 1516 | 3.408755 | CACAACTGTGTCGCTGCA | 58.591 | 55.556 | 0.00 | 0.00 | 40.96 | 4.41 |
1503 | 1528 | 1.444119 | TTCTTGGCTGCCGACACAAC | 61.444 | 55.000 | 14.98 | 0.00 | 0.00 | 3.32 |
1588 | 1613 | 4.543736 | CGAAGTGCGCGTCGATGC | 62.544 | 66.667 | 27.80 | 19.84 | 46.68 | 3.91 |
1808 | 1833 | 2.685100 | CCTCTTACCGTCAACAACTCC | 58.315 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1866 | 1891 | 4.742201 | AACTGGAGATGCGCGCGT | 62.742 | 61.111 | 32.35 | 28.54 | 0.00 | 6.01 |
1901 | 1926 | 2.019951 | GCGACATATACGGCGGTGG | 61.020 | 63.158 | 13.24 | 0.95 | 0.00 | 4.61 |
2101 | 2126 | 1.290955 | CGAGTGCCGGAACTTGGTA | 59.709 | 57.895 | 21.27 | 0.00 | 33.91 | 3.25 |
2164 | 2189 | 1.839994 | GGTGATCCATCCTTCTCCACA | 59.160 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2199 | 2227 | 3.501950 | GAAGTGAAATTGATTCGTGGGC | 58.498 | 45.455 | 0.00 | 0.00 | 41.18 | 5.36 |
2201 | 2229 | 3.163594 | GCGAAGTGAAATTGATTCGTGG | 58.836 | 45.455 | 12.94 | 0.00 | 44.71 | 4.94 |
2205 | 2233 | 4.406943 | GTGAGGCGAAGTGAAATTGATTC | 58.593 | 43.478 | 0.00 | 0.00 | 38.60 | 2.52 |
2207 | 2235 | 2.749621 | GGTGAGGCGAAGTGAAATTGAT | 59.250 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2264 | 2294 | 5.187576 | TCAAAGATAAATGCCCTTTCCTTGG | 59.812 | 40.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2350 | 2836 | 6.449635 | AAGTGCTTTGTGTCACTGATTAAA | 57.550 | 33.333 | 4.27 | 0.00 | 42.19 | 1.52 |
2458 | 3373 | 9.255029 | ACCATTACCTAATAAAGCTTTGATGTT | 57.745 | 29.630 | 22.02 | 12.67 | 0.00 | 2.71 |
2462 | 3377 | 8.885722 | CGTTACCATTACCTAATAAAGCTTTGA | 58.114 | 33.333 | 22.02 | 6.40 | 0.00 | 2.69 |
2472 | 3387 | 8.026396 | ACCTATGAACGTTACCATTACCTAAT | 57.974 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
2482 | 3397 | 7.201582 | CCAATTCTTGTACCTATGAACGTTACC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 2.85 |
2487 | 3402 | 6.017934 | CCATCCAATTCTTGTACCTATGAACG | 60.018 | 42.308 | 0.00 | 0.00 | 0.00 | 3.95 |
2525 | 3440 | 3.181484 | CCATATCAAGCCAACATGTGTGG | 60.181 | 47.826 | 17.67 | 17.67 | 0.00 | 4.17 |
2534 | 3449 | 2.886523 | GCATGCTACCATATCAAGCCAA | 59.113 | 45.455 | 11.37 | 0.00 | 35.33 | 4.52 |
2535 | 3450 | 2.507484 | GCATGCTACCATATCAAGCCA | 58.493 | 47.619 | 11.37 | 0.00 | 35.33 | 4.75 |
2536 | 3451 | 1.815003 | GGCATGCTACCATATCAAGCC | 59.185 | 52.381 | 18.92 | 0.00 | 35.33 | 4.35 |
2575 | 3490 | 4.533919 | AGCTCATAATCTCGCTAAGCAT | 57.466 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
2601 | 3516 | 2.734606 | CACGAGCACGGAAACTTCAATA | 59.265 | 45.455 | 8.74 | 0.00 | 44.46 | 1.90 |
2603 | 3518 | 0.934496 | CACGAGCACGGAAACTTCAA | 59.066 | 50.000 | 8.74 | 0.00 | 44.46 | 2.69 |
2622 | 3537 | 0.313672 | TCCGTCCTGCAATTTTGTGC | 59.686 | 50.000 | 0.00 | 0.00 | 45.15 | 4.57 |
2623 | 3538 | 2.791383 | TTCCGTCCTGCAATTTTGTG | 57.209 | 45.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2631 | 3547 | 1.202879 | AGATTGGTTTTCCGTCCTGCA | 60.203 | 47.619 | 0.00 | 0.00 | 44.36 | 4.41 |
2639 | 3555 | 3.649073 | CAAACCGGAAGATTGGTTTTCC | 58.351 | 45.455 | 9.46 | 0.00 | 41.52 | 3.13 |
2640 | 3556 | 3.057019 | GCAAACCGGAAGATTGGTTTTC | 58.943 | 45.455 | 9.46 | 0.00 | 41.52 | 2.29 |
2644 | 3560 | 1.923356 | ATGCAAACCGGAAGATTGGT | 58.077 | 45.000 | 9.46 | 0.00 | 41.20 | 3.67 |
2655 | 3571 | 3.507233 | TGTCATCAGGAAGAATGCAAACC | 59.493 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
2658 | 3574 | 2.751259 | GCTGTCATCAGGAAGAATGCAA | 59.249 | 45.455 | 0.00 | 0.00 | 41.57 | 4.08 |
2659 | 3575 | 2.290450 | TGCTGTCATCAGGAAGAATGCA | 60.290 | 45.455 | 0.00 | 0.00 | 38.99 | 3.96 |
2663 | 3579 | 6.407412 | CCTTATAGTGCTGTCATCAGGAAGAA | 60.407 | 42.308 | 0.00 | 0.00 | 43.20 | 2.52 |
2667 | 3583 | 3.070159 | GCCTTATAGTGCTGTCATCAGGA | 59.930 | 47.826 | 0.00 | 0.00 | 41.57 | 3.86 |
2678 | 3594 | 5.182001 | CCCATTACAATCAGCCTTATAGTGC | 59.818 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2685 | 3601 | 2.582636 | ACTCCCCATTACAATCAGCCTT | 59.417 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
2689 | 3605 | 9.823647 | GTATATGATACTCCCCATTACAATCAG | 57.176 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2690 | 3606 | 9.560860 | AGTATATGATACTCCCCATTACAATCA | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2699 | 3615 | 9.868160 | CATGATACTAGTATATGATACTCCCCA | 57.132 | 37.037 | 15.42 | 5.35 | 0.00 | 4.96 |
2700 | 3616 | 8.798402 | GCATGATACTAGTATATGATACTCCCC | 58.202 | 40.741 | 22.89 | 8.64 | 0.00 | 4.81 |
2701 | 3617 | 9.355916 | TGCATGATACTAGTATATGATACTCCC | 57.644 | 37.037 | 22.89 | 9.00 | 0.00 | 4.30 |
2737 | 3653 | 8.924303 | TGCATTAAAGAGGTAGTATCATACACT | 58.076 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2738 | 3654 | 9.712305 | ATGCATTAAAGAGGTAGTATCATACAC | 57.288 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2782 | 3698 | 9.710900 | CATGGCAATAAATAGAGTACTACATGA | 57.289 | 33.333 | 0.00 | 0.00 | 33.32 | 3.07 |
2783 | 3699 | 8.446273 | GCATGGCAATAAATAGAGTACTACATG | 58.554 | 37.037 | 0.00 | 0.00 | 34.30 | 3.21 |
2784 | 3700 | 8.156820 | TGCATGGCAATAAATAGAGTACTACAT | 58.843 | 33.333 | 0.00 | 0.00 | 34.76 | 2.29 |
2785 | 3701 | 7.505258 | TGCATGGCAATAAATAGAGTACTACA | 58.495 | 34.615 | 0.00 | 0.00 | 34.76 | 2.74 |
2786 | 3702 | 7.962964 | TGCATGGCAATAAATAGAGTACTAC | 57.037 | 36.000 | 0.00 | 0.00 | 34.76 | 2.73 |
2787 | 3703 | 8.374743 | TCATGCATGGCAATAAATAGAGTACTA | 58.625 | 33.333 | 25.97 | 0.00 | 43.62 | 1.82 |
2788 | 3704 | 7.173907 | GTCATGCATGGCAATAAATAGAGTACT | 59.826 | 37.037 | 26.04 | 0.00 | 43.62 | 2.73 |
2789 | 3705 | 7.041167 | TGTCATGCATGGCAATAAATAGAGTAC | 60.041 | 37.037 | 30.82 | 13.36 | 43.62 | 2.73 |
2790 | 3706 | 6.997476 | TGTCATGCATGGCAATAAATAGAGTA | 59.003 | 34.615 | 30.82 | 3.13 | 43.62 | 2.59 |
2791 | 3707 | 5.829391 | TGTCATGCATGGCAATAAATAGAGT | 59.171 | 36.000 | 30.82 | 0.00 | 43.62 | 3.24 |
2792 | 3708 | 6.147581 | GTGTCATGCATGGCAATAAATAGAG | 58.852 | 40.000 | 34.01 | 0.00 | 44.94 | 2.43 |
2793 | 3709 | 5.593502 | TGTGTCATGCATGGCAATAAATAGA | 59.406 | 36.000 | 34.01 | 6.92 | 44.94 | 1.98 |
2794 | 3710 | 5.834169 | TGTGTCATGCATGGCAATAAATAG | 58.166 | 37.500 | 34.01 | 0.35 | 44.94 | 1.73 |
2795 | 3711 | 5.848833 | TGTGTCATGCATGGCAATAAATA | 57.151 | 34.783 | 34.01 | 14.13 | 44.94 | 1.40 |
2796 | 3712 | 4.739587 | TGTGTCATGCATGGCAATAAAT | 57.260 | 36.364 | 34.01 | 0.00 | 44.94 | 1.40 |
2797 | 3713 | 4.532314 | TTGTGTCATGCATGGCAATAAA | 57.468 | 36.364 | 34.01 | 24.20 | 44.94 | 1.40 |
2798 | 3714 | 4.021280 | ACTTTGTGTCATGCATGGCAATAA | 60.021 | 37.500 | 34.01 | 26.82 | 44.94 | 1.40 |
2799 | 3715 | 3.510753 | ACTTTGTGTCATGCATGGCAATA | 59.489 | 39.130 | 34.01 | 22.99 | 44.94 | 1.90 |
2800 | 3716 | 2.300723 | ACTTTGTGTCATGCATGGCAAT | 59.699 | 40.909 | 34.01 | 15.19 | 44.94 | 3.56 |
2801 | 3717 | 1.687660 | ACTTTGTGTCATGCATGGCAA | 59.312 | 42.857 | 34.01 | 25.74 | 44.94 | 4.52 |
2802 | 3718 | 1.330234 | ACTTTGTGTCATGCATGGCA | 58.670 | 45.000 | 29.45 | 29.45 | 44.86 | 4.92 |
2803 | 3719 | 2.733227 | GCTACTTTGTGTCATGCATGGC | 60.733 | 50.000 | 24.40 | 24.40 | 0.00 | 4.40 |
2804 | 3720 | 2.488937 | TGCTACTTTGTGTCATGCATGG | 59.511 | 45.455 | 25.97 | 10.76 | 0.00 | 3.66 |
2805 | 3721 | 3.835378 | TGCTACTTTGTGTCATGCATG | 57.165 | 42.857 | 21.07 | 21.07 | 0.00 | 4.06 |
2806 | 3722 | 4.036027 | GCTATGCTACTTTGTGTCATGCAT | 59.964 | 41.667 | 0.00 | 0.00 | 40.50 | 3.96 |
2807 | 3723 | 3.374988 | GCTATGCTACTTTGTGTCATGCA | 59.625 | 43.478 | 0.00 | 0.00 | 35.34 | 3.96 |
2808 | 3724 | 3.374988 | TGCTATGCTACTTTGTGTCATGC | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 4.06 |
2809 | 3725 | 5.746307 | ATGCTATGCTACTTTGTGTCATG | 57.254 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
2810 | 3726 | 6.764308 | AAATGCTATGCTACTTTGTGTCAT | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2811 | 3727 | 7.864108 | ATAAATGCTATGCTACTTTGTGTCA | 57.136 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2819 | 3735 | 9.534565 | CCGTATCATAATAAATGCTATGCTACT | 57.465 | 33.333 | 0.00 | 0.00 | 30.34 | 2.57 |
2820 | 3736 | 9.314321 | ACCGTATCATAATAAATGCTATGCTAC | 57.686 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
2848 | 3764 | 5.908590 | AGAGGGTGGAGTATCATATCATGA | 58.091 | 41.667 | 0.00 | 0.00 | 44.55 | 3.07 |
2849 | 3765 | 5.957168 | AGAGAGGGTGGAGTATCATATCATG | 59.043 | 44.000 | 0.00 | 0.00 | 36.25 | 3.07 |
2850 | 3766 | 6.164425 | AGAGAGGGTGGAGTATCATATCAT | 57.836 | 41.667 | 0.00 | 0.00 | 36.25 | 2.45 |
2851 | 3767 | 5.607168 | AGAGAGGGTGGAGTATCATATCA | 57.393 | 43.478 | 0.00 | 0.00 | 36.25 | 2.15 |
2852 | 3768 | 6.723977 | AGAAAGAGAGGGTGGAGTATCATATC | 59.276 | 42.308 | 0.00 | 0.00 | 36.25 | 1.63 |
2853 | 3769 | 6.629156 | AGAAAGAGAGGGTGGAGTATCATAT | 58.371 | 40.000 | 0.00 | 0.00 | 36.25 | 1.78 |
2854 | 3770 | 6.031964 | AGAAAGAGAGGGTGGAGTATCATA | 57.968 | 41.667 | 0.00 | 0.00 | 36.25 | 2.15 |
2855 | 3771 | 4.889780 | AGAAAGAGAGGGTGGAGTATCAT | 58.110 | 43.478 | 0.00 | 0.00 | 36.25 | 2.45 |
2856 | 3772 | 4.338795 | AGAAAGAGAGGGTGGAGTATCA | 57.661 | 45.455 | 0.00 | 0.00 | 36.25 | 2.15 |
2857 | 3773 | 4.712337 | TGAAGAAAGAGAGGGTGGAGTATC | 59.288 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
2858 | 3774 | 4.689062 | TGAAGAAAGAGAGGGTGGAGTAT | 58.311 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
2859 | 3775 | 4.127918 | TGAAGAAAGAGAGGGTGGAGTA | 57.872 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2860 | 3776 | 2.977808 | TGAAGAAAGAGAGGGTGGAGT | 58.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2861 | 3777 | 4.566426 | AATGAAGAAAGAGAGGGTGGAG | 57.434 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2862 | 3778 | 6.448369 | TTAAATGAAGAAAGAGAGGGTGGA | 57.552 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
2863 | 3779 | 6.405176 | GCATTAAATGAAGAAAGAGAGGGTGG | 60.405 | 42.308 | 0.00 | 0.00 | 0.00 | 4.61 |
2864 | 3780 | 6.376581 | AGCATTAAATGAAGAAAGAGAGGGTG | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
2865 | 3781 | 6.488715 | AGCATTAAATGAAGAAAGAGAGGGT | 58.511 | 36.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2866 | 3782 | 8.566260 | CATAGCATTAAATGAAGAAAGAGAGGG | 58.434 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
2867 | 3783 | 9.334947 | TCATAGCATTAAATGAAGAAAGAGAGG | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 3.69 |
2869 | 3785 | 9.671279 | TGTCATAGCATTAAATGAAGAAAGAGA | 57.329 | 29.630 | 0.00 | 0.00 | 34.06 | 3.10 |
2870 | 3786 | 9.713740 | GTGTCATAGCATTAAATGAAGAAAGAG | 57.286 | 33.333 | 0.00 | 0.00 | 34.06 | 2.85 |
2871 | 3787 | 8.677300 | GGTGTCATAGCATTAAATGAAGAAAGA | 58.323 | 33.333 | 0.00 | 0.00 | 34.06 | 2.52 |
2872 | 3788 | 8.680903 | AGGTGTCATAGCATTAAATGAAGAAAG | 58.319 | 33.333 | 0.00 | 0.00 | 34.06 | 2.62 |
2873 | 3789 | 8.579850 | AGGTGTCATAGCATTAAATGAAGAAA | 57.420 | 30.769 | 0.00 | 0.00 | 34.06 | 2.52 |
2874 | 3790 | 8.579850 | AAGGTGTCATAGCATTAAATGAAGAA | 57.420 | 30.769 | 0.00 | 0.00 | 34.06 | 2.52 |
2875 | 3791 | 9.851686 | ATAAGGTGTCATAGCATTAAATGAAGA | 57.148 | 29.630 | 0.00 | 0.00 | 34.06 | 2.87 |
2877 | 3793 | 9.625747 | TGATAAGGTGTCATAGCATTAAATGAA | 57.374 | 29.630 | 0.00 | 0.00 | 34.06 | 2.57 |
2878 | 3794 | 9.625747 | TTGATAAGGTGTCATAGCATTAAATGA | 57.374 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2884 | 3800 | 7.707893 | GCAATTTTGATAAGGTGTCATAGCATT | 59.292 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
2885 | 3801 | 7.205297 | GCAATTTTGATAAGGTGTCATAGCAT | 58.795 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
2886 | 3802 | 6.405731 | GGCAATTTTGATAAGGTGTCATAGCA | 60.406 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
2887 | 3803 | 5.979517 | GGCAATTTTGATAAGGTGTCATAGC | 59.020 | 40.000 | 0.00 | 0.00 | 0.00 | 2.97 |
2888 | 3804 | 7.338800 | AGGCAATTTTGATAAGGTGTCATAG | 57.661 | 36.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2889 | 3805 | 8.052748 | ACTAGGCAATTTTGATAAGGTGTCATA | 58.947 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
2890 | 3806 | 6.891908 | ACTAGGCAATTTTGATAAGGTGTCAT | 59.108 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
2891 | 3807 | 6.245408 | ACTAGGCAATTTTGATAAGGTGTCA | 58.755 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2892 | 3808 | 6.759497 | ACTAGGCAATTTTGATAAGGTGTC | 57.241 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2893 | 3809 | 6.071391 | CCAACTAGGCAATTTTGATAAGGTGT | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
2894 | 3810 | 6.332630 | CCAACTAGGCAATTTTGATAAGGTG | 58.667 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2895 | 3811 | 6.530019 | CCAACTAGGCAATTTTGATAAGGT | 57.470 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
2910 | 3826 | 3.748083 | AGTATCATGCATGCCAACTAGG | 58.252 | 45.455 | 22.25 | 0.00 | 41.84 | 3.02 |
2911 | 3827 | 4.391216 | GCTAGTATCATGCATGCCAACTAG | 59.609 | 45.833 | 32.38 | 32.38 | 37.27 | 2.57 |
2912 | 3828 | 4.040829 | AGCTAGTATCATGCATGCCAACTA | 59.959 | 41.667 | 22.25 | 22.70 | 0.00 | 2.24 |
2913 | 3829 | 3.144506 | GCTAGTATCATGCATGCCAACT | 58.855 | 45.455 | 22.25 | 22.78 | 0.00 | 3.16 |
2914 | 3830 | 3.144506 | AGCTAGTATCATGCATGCCAAC | 58.855 | 45.455 | 22.25 | 17.59 | 0.00 | 3.77 |
2915 | 3831 | 3.497103 | AGCTAGTATCATGCATGCCAA | 57.503 | 42.857 | 22.25 | 5.34 | 0.00 | 4.52 |
2916 | 3832 | 4.223477 | TCATAGCTAGTATCATGCATGCCA | 59.777 | 41.667 | 22.25 | 8.84 | 0.00 | 4.92 |
2917 | 3833 | 4.763073 | TCATAGCTAGTATCATGCATGCC | 58.237 | 43.478 | 22.25 | 11.72 | 0.00 | 4.40 |
2918 | 3834 | 7.208777 | AGTATCATAGCTAGTATCATGCATGC | 58.791 | 38.462 | 22.25 | 11.82 | 0.00 | 4.06 |
2919 | 3835 | 9.676195 | GTAGTATCATAGCTAGTATCATGCATG | 57.324 | 37.037 | 21.07 | 21.07 | 0.00 | 4.06 |
2920 | 3836 | 8.855110 | GGTAGTATCATAGCTAGTATCATGCAT | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 3.96 |
2921 | 3837 | 7.834181 | TGGTAGTATCATAGCTAGTATCATGCA | 59.166 | 37.037 | 0.00 | 0.00 | 0.00 | 3.96 |
2922 | 3838 | 8.226819 | TGGTAGTATCATAGCTAGTATCATGC | 57.773 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
2928 | 3844 | 9.376075 | GTCGTAATGGTAGTATCATAGCTAGTA | 57.624 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
2929 | 3845 | 7.336427 | GGTCGTAATGGTAGTATCATAGCTAGT | 59.664 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
2930 | 3846 | 7.336176 | TGGTCGTAATGGTAGTATCATAGCTAG | 59.664 | 40.741 | 0.00 | 0.00 | 0.00 | 3.42 |
2931 | 3847 | 7.170277 | TGGTCGTAATGGTAGTATCATAGCTA | 58.830 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
2932 | 3848 | 6.008331 | TGGTCGTAATGGTAGTATCATAGCT | 58.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2933 | 3849 | 6.263516 | TGGTCGTAATGGTAGTATCATAGC | 57.736 | 41.667 | 0.00 | 0.00 | 0.00 | 2.97 |
2934 | 3850 | 6.323266 | GCTGGTCGTAATGGTAGTATCATAG | 58.677 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2935 | 3851 | 5.184479 | GGCTGGTCGTAATGGTAGTATCATA | 59.816 | 44.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2936 | 3852 | 4.021368 | GGCTGGTCGTAATGGTAGTATCAT | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 2.45 |
2937 | 3853 | 3.319972 | GGCTGGTCGTAATGGTAGTATCA | 59.680 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
2938 | 3854 | 3.573110 | AGGCTGGTCGTAATGGTAGTATC | 59.427 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
2939 | 3855 | 3.573695 | AGGCTGGTCGTAATGGTAGTAT | 58.426 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
2940 | 3856 | 3.022557 | AGGCTGGTCGTAATGGTAGTA | 57.977 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
2941 | 3857 | 1.861982 | AGGCTGGTCGTAATGGTAGT | 58.138 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2942 | 3858 | 3.243771 | CCTTAGGCTGGTCGTAATGGTAG | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
2943 | 3859 | 2.696707 | CCTTAGGCTGGTCGTAATGGTA | 59.303 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2944 | 3860 | 1.485066 | CCTTAGGCTGGTCGTAATGGT | 59.515 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
2945 | 3861 | 1.202651 | CCCTTAGGCTGGTCGTAATGG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
2946 | 3862 | 2.240493 | CCCTTAGGCTGGTCGTAATG | 57.760 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2958 | 3874 | 0.613777 | AGGAACTCGTTGCCCTTAGG | 59.386 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2959 | 3875 | 2.028020 | AGAAGGAACTCGTTGCCCTTAG | 60.028 | 50.000 | 0.00 | 0.00 | 38.49 | 2.18 |
2960 | 3876 | 1.975680 | AGAAGGAACTCGTTGCCCTTA | 59.024 | 47.619 | 0.00 | 0.00 | 38.49 | 2.69 |
2961 | 3877 | 0.765510 | AGAAGGAACTCGTTGCCCTT | 59.234 | 50.000 | 0.00 | 0.00 | 38.49 | 3.95 |
2962 | 3878 | 0.765510 | AAGAAGGAACTCGTTGCCCT | 59.234 | 50.000 | 0.00 | 0.00 | 38.49 | 5.19 |
2963 | 3879 | 1.157585 | GAAGAAGGAACTCGTTGCCC | 58.842 | 55.000 | 0.00 | 0.00 | 38.49 | 5.36 |
2964 | 3880 | 1.878953 | TGAAGAAGGAACTCGTTGCC | 58.121 | 50.000 | 0.00 | 0.00 | 38.49 | 4.52 |
2965 | 3881 | 5.179555 | AGTTATTGAAGAAGGAACTCGTTGC | 59.820 | 40.000 | 0.00 | 0.00 | 38.49 | 4.17 |
2966 | 3882 | 6.787085 | AGTTATTGAAGAAGGAACTCGTTG | 57.213 | 37.500 | 0.00 | 0.00 | 38.49 | 4.10 |
2967 | 3883 | 7.217906 | AGAAGTTATTGAAGAAGGAACTCGTT | 58.782 | 34.615 | 0.00 | 0.00 | 38.49 | 3.85 |
2968 | 3884 | 6.760291 | AGAAGTTATTGAAGAAGGAACTCGT | 58.240 | 36.000 | 0.00 | 0.00 | 38.49 | 4.18 |
2969 | 3885 | 7.275999 | GGTAGAAGTTATTGAAGAAGGAACTCG | 59.724 | 40.741 | 0.00 | 0.00 | 38.49 | 4.18 |
2970 | 3886 | 8.095169 | TGGTAGAAGTTATTGAAGAAGGAACTC | 58.905 | 37.037 | 0.00 | 0.00 | 38.49 | 3.01 |
2987 | 3903 | 2.656947 | TGCAAAGGCTTGGTAGAAGT | 57.343 | 45.000 | 0.00 | 0.00 | 41.91 | 3.01 |
3015 | 3931 | 1.905894 | TCCCGAGGAACATTCACATCA | 59.094 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
3032 | 3948 | 4.153117 | GTCATTCGCATATGATCTTGTCCC | 59.847 | 45.833 | 6.97 | 0.00 | 36.94 | 4.46 |
3051 | 3967 | 4.078639 | GCTTGTAGGGAAGCTATGTCAT | 57.921 | 45.455 | 0.00 | 0.00 | 44.26 | 3.06 |
3093 | 4009 | 7.464977 | CGATTATTTTTGAAGGTACGACGGATT | 60.465 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
3096 | 4012 | 5.486706 | CGATTATTTTTGAAGGTACGACGG | 58.513 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3103 | 4019 | 3.447229 | CCCCAGCGATTATTTTTGAAGGT | 59.553 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
3114 | 4030 | 1.801242 | TCTTGGATCCCCAGCGATTA | 58.199 | 50.000 | 9.90 | 0.00 | 44.60 | 1.75 |
3121 | 4037 | 2.134354 | TGTGCATATCTTGGATCCCCA | 58.866 | 47.619 | 9.90 | 0.00 | 41.64 | 4.96 |
3164 | 4080 | 0.613292 | ATGGCGCCATAACCCAACAA | 60.613 | 50.000 | 39.91 | 8.92 | 34.49 | 2.83 |
3171 | 4087 | 1.032014 | AACATGGATGGCGCCATAAC | 58.968 | 50.000 | 40.56 | 33.24 | 46.70 | 1.89 |
3172 | 4088 | 1.031235 | CAACATGGATGGCGCCATAA | 58.969 | 50.000 | 40.56 | 30.77 | 46.70 | 1.90 |
3173 | 4089 | 1.454572 | GCAACATGGATGGCGCCATA | 61.455 | 55.000 | 40.56 | 27.38 | 46.70 | 2.74 |
3175 | 4091 | 3.451004 | GCAACATGGATGGCGCCA | 61.451 | 61.111 | 34.80 | 34.80 | 43.23 | 5.69 |
3176 | 4092 | 2.713967 | AAGCAACATGGATGGCGCC | 61.714 | 57.895 | 22.73 | 22.73 | 31.78 | 6.53 |
3177 | 4093 | 2.887360 | AAGCAACATGGATGGCGC | 59.113 | 55.556 | 0.00 | 0.00 | 0.00 | 6.53 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.