Multiple sequence alignment - TraesCS6A01G294200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G294200 chr6A 100.000 7734 0 0 1 7734 526113590 526121323 0.000000e+00 14283.0
1 TraesCS6A01G294200 chr6A 89.952 209 15 4 2075 2282 16326271 16326474 1.650000e-66 265.0
2 TraesCS6A01G294200 chr6A 78.125 160 29 4 1446 1604 583400876 583400722 6.390000e-16 97.1
3 TraesCS6A01G294200 chr6B 93.686 2138 109 10 4251 6386 574462616 574464729 0.000000e+00 3177.0
4 TraesCS6A01G294200 chr6B 93.188 1967 90 23 2298 4251 574460639 574462574 0.000000e+00 2850.0
5 TraesCS6A01G294200 chr6B 91.655 719 25 16 483 1193 574458667 574459358 0.000000e+00 963.0
6 TraesCS6A01G294200 chr6B 87.007 685 34 13 1606 2255 574459775 574460439 0.000000e+00 721.0
7 TraesCS6A01G294200 chr6B 92.585 472 28 4 6436 6904 574464829 574465296 0.000000e+00 671.0
8 TraesCS6A01G294200 chr6B 87.027 370 27 11 1987 2343 360920971 360920610 1.560000e-106 398.0
9 TraesCS6A01G294200 chr6B 89.494 257 15 4 200 450 574456996 574457246 1.620000e-81 315.0
10 TraesCS6A01G294200 chr6B 78.814 236 42 7 7349 7580 147958211 147957980 1.340000e-32 152.0
11 TraesCS6A01G294200 chr6D 91.114 1992 90 44 2298 4251 384218580 384220522 0.000000e+00 2617.0
12 TraesCS6A01G294200 chr6D 93.134 1806 87 17 4613 6389 384221043 384222840 0.000000e+00 2614.0
13 TraesCS6A01G294200 chr6D 89.968 1246 70 30 29 1261 384216286 384217489 0.000000e+00 1557.0
14 TraesCS6A01G294200 chr6D 88.026 760 72 9 6436 7182 384222851 384223604 0.000000e+00 881.0
15 TraesCS6A01G294200 chr6D 88.235 680 22 18 1605 2255 384217747 384218397 0.000000e+00 760.0
16 TraesCS6A01G294200 chr6D 94.795 365 17 2 4251 4614 384220565 384220928 1.130000e-157 568.0
17 TraesCS6A01G294200 chr6D 89.831 177 7 2 1267 1443 384217565 384217730 4.700000e-52 217.0
18 TraesCS6A01G294200 chr6D 94.488 127 7 0 7415 7541 384227052 384227178 6.120000e-46 196.0
19 TraesCS6A01G294200 chr6D 95.349 86 4 0 7649 7734 384227446 384227531 3.760000e-28 137.0
20 TraesCS6A01G294200 chr6D 79.375 160 26 5 1446 1604 111565601 111565448 1.060000e-18 106.0
21 TraesCS6A01G294200 chr6D 96.721 61 1 1 7528 7587 384227196 384227256 4.940000e-17 100.0
22 TraesCS6A01G294200 chr7B 87.736 530 35 13 1969 2486 738780056 738779545 6.680000e-165 592.0
23 TraesCS6A01G294200 chr4B 87.647 510 39 12 2075 2572 637473278 637472781 8.710000e-159 571.0
24 TraesCS6A01G294200 chr4B 86.486 333 26 10 2251 2572 356438845 356439169 1.600000e-91 348.0
25 TraesCS6A01G294200 chr4B 90.438 251 20 1 2322 2572 313257442 313257688 2.080000e-85 327.0
26 TraesCS6A01G294200 chr4B 81.169 154 22 5 1458 1606 366925171 366925020 4.900000e-22 117.0
27 TraesCS6A01G294200 chr2D 78.010 623 127 9 5541 6158 325361523 325360906 4.380000e-102 383.0
28 TraesCS6A01G294200 chr2D 81.308 214 40 0 2385 2598 325364698 325364485 2.870000e-39 174.0
29 TraesCS6A01G294200 chr2B 78.010 623 127 9 5541 6158 394361231 394360614 4.380000e-102 383.0
30 TraesCS6A01G294200 chr2B 82.243 214 38 0 2385 2598 394364262 394364049 1.330000e-42 185.0
31 TraesCS6A01G294200 chr1D 84.688 320 25 13 2072 2379 20517110 20516803 1.630000e-76 298.0
32 TraesCS6A01G294200 chr7A 90.431 209 14 4 2075 2282 592765125 592765328 3.560000e-68 270.0
33 TraesCS6A01G294200 chr7A 89.474 209 16 4 2075 2282 71600671 71600468 7.700000e-65 259.0
34 TraesCS6A01G294200 chr7A 86.986 146 19 0 1461 1606 36556487 36556632 1.730000e-36 165.0
35 TraesCS6A01G294200 chr7A 90.196 51 3 2 5424 5473 711669390 711669341 1.800000e-06 65.8
36 TraesCS6A01G294200 chr5A 89.474 209 16 4 2075 2282 102506398 102506195 7.700000e-65 259.0
37 TraesCS6A01G294200 chr5A 89.474 209 16 4 2075 2282 548363554 548363757 7.700000e-65 259.0
38 TraesCS6A01G294200 chr5A 82.877 146 21 2 1461 1606 686503923 686503782 2.270000e-25 128.0
39 TraesCS6A01G294200 chr5A 87.500 48 5 1 5428 5475 623015159 623015113 4.000000e-03 54.7
40 TraesCS6A01G294200 chr2A 83.412 211 35 0 2385 2595 392724560 392724770 6.120000e-46 196.0
41 TraesCS6A01G294200 chr2A 100.000 32 0 0 5443 5474 20044737 20044706 8.380000e-05 60.2
42 TraesCS6A01G294200 chr3B 87.578 161 20 0 1446 1606 19964841 19965001 3.690000e-43 187.0
43 TraesCS6A01G294200 chr3B 85.577 104 14 1 5390 5492 764359046 764358943 2.950000e-19 108.0
44 TraesCS6A01G294200 chr3B 77.857 140 26 4 5332 5468 798335287 798335424 1.790000e-11 82.4
45 TraesCS6A01G294200 chr4D 91.892 111 8 1 1987 2096 209896293 209896403 3.740000e-33 154.0
46 TraesCS6A01G294200 chr1B 85.124 121 12 3 4984 5102 604663872 604663756 1.360000e-22 119.0
47 TraesCS6A01G294200 chr1B 80.537 149 23 4 1457 1604 489208317 489208460 8.210000e-20 110.0
48 TraesCS6A01G294200 chr1B 84.694 98 9 3 4984 5079 604710739 604710646 8.260000e-15 93.5
49 TraesCS6A01G294200 chr7D 76.636 214 42 8 7363 7569 12451387 12451175 2.280000e-20 111.0
50 TraesCS6A01G294200 chr5B 81.395 129 24 0 5337 5465 531147163 531147035 1.060000e-18 106.0
51 TraesCS6A01G294200 chr4A 79.333 150 25 4 1457 1605 597803687 597803831 4.940000e-17 100.0
52 TraesCS6A01G294200 chr1A 78.846 156 27 4 1446 1600 512640705 512640855 4.940000e-17 100.0
53 TraesCS6A01G294200 chr1A 85.526 76 10 1 5390 5464 31161005 31161080 2.310000e-10 78.7
54 TraesCS6A01G294200 chr3A 83.178 107 15 2 7359 7464 126086433 126086537 2.300000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G294200 chr6A 526113590 526121323 7733 False 14283.0 14283 100.000000 1 7734 1 chr6A.!!$F2 7733
1 TraesCS6A01G294200 chr6B 574456996 574465296 8300 False 1449.5 3177 91.269167 200 6904 6 chr6B.!!$F1 6704
2 TraesCS6A01G294200 chr6D 384216286 384227531 11245 False 964.7 2617 92.166100 29 7734 10 chr6D.!!$F1 7705
3 TraesCS6A01G294200 chr7B 738779545 738780056 511 True 592.0 592 87.736000 1969 2486 1 chr7B.!!$R1 517
4 TraesCS6A01G294200 chr2D 325360906 325364698 3792 True 278.5 383 79.659000 2385 6158 2 chr2D.!!$R1 3773
5 TraesCS6A01G294200 chr2B 394360614 394364262 3648 True 284.0 383 80.126500 2385 6158 2 chr2B.!!$R1 3773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 401 0.036306 AAACGGAAGGCAGGACGAAT 59.964 50.0 0.00 0.0 0.00 3.34 F
1348 2828 0.033011 TTCTCTCCTCCTTCTCCCCG 60.033 60.0 0.00 0.0 0.00 5.73 F
2255 3907 0.036010 ATCAAGTTGGACTGCTCGGG 60.036 55.0 2.34 0.0 0.00 5.14 F
2619 4428 0.526211 CCAACGATCGTCTCTCACCA 59.474 55.0 22.98 0.0 0.00 4.17 F
3610 5976 0.618981 ATCTGGGGAAGGAAACGACC 59.381 55.0 0.00 0.0 0.00 4.79 F
4118 7569 0.771127 TTCTTTCTGTGGGGACTGGG 59.229 55.0 0.00 0.0 0.00 4.45 F
5367 9015 0.107456 CATGCCTCTTAGCGGTGGAT 59.893 55.0 0.00 0.0 34.65 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1496 3110 0.610174 AGCGAGAGATGTTGCCAAGA 59.390 50.0 0.00 0.00 0.00 3.02 R
2985 5252 0.466922 GGCCCCTGTCATTCTGATGG 60.467 60.0 0.00 0.00 33.93 3.51 R
3601 5966 0.033090 AGTCGGTCAAGGTCGTTTCC 59.967 55.0 0.00 0.00 0.00 3.13 R
3799 7248 1.112916 TGAGGAGAAGCCACACGACA 61.113 55.0 0.00 0.00 40.02 4.35 R
4808 8421 0.251077 AAGCTCAGCTGAAACAGGGG 60.251 55.0 18.85 5.15 39.62 4.79 R
5863 9512 0.321298 GCTCCGTGTAGAAAAGGCCA 60.321 55.0 5.01 0.00 0.00 5.36 R
6962 10673 0.105778 TGCACACAACGGACATCAGA 59.894 50.0 0.00 0.00 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.332430 TGTTATTAGTTGTAATCTTGGTCGGTG 59.668 37.037 0.00 0.00 31.04 4.94
42 43 2.635915 AGTTGTAATCTTGGTCGGTGGA 59.364 45.455 0.00 0.00 0.00 4.02
46 47 2.403252 AATCTTGGTCGGTGGATGAC 57.597 50.000 0.00 0.00 35.60 3.06
57 58 5.644636 GGTCGGTGGATGACTTTGTTAATTA 59.355 40.000 0.00 0.00 36.58 1.40
58 59 6.149807 GGTCGGTGGATGACTTTGTTAATTAA 59.850 38.462 0.00 0.00 36.58 1.40
61 62 8.630917 TCGGTGGATGACTTTGTTAATTAAAAA 58.369 29.630 0.00 0.00 0.00 1.94
83 85 8.506168 AAAATTGATTTCATTCGGCTCTACTA 57.494 30.769 0.00 0.00 0.00 1.82
85 87 8.506168 AATTGATTTCATTCGGCTCTACTAAA 57.494 30.769 0.00 0.00 0.00 1.85
86 88 7.915293 TTGATTTCATTCGGCTCTACTAAAA 57.085 32.000 0.00 0.00 0.00 1.52
87 89 7.539712 TGATTTCATTCGGCTCTACTAAAAG 57.460 36.000 0.00 0.00 0.00 2.27
88 90 7.327975 TGATTTCATTCGGCTCTACTAAAAGA 58.672 34.615 0.00 0.00 0.00 2.52
91 93 8.561738 TTTCATTCGGCTCTACTAAAAGAAAT 57.438 30.769 0.00 0.00 0.00 2.17
110 112 5.648092 AGAAATAAACTTATGCCACGCTTCT 59.352 36.000 0.00 0.00 0.00 2.85
114 116 3.059352 ACTTATGCCACGCTTCTTTCT 57.941 42.857 0.00 0.00 0.00 2.52
116 118 2.760634 TATGCCACGCTTCTTTCTGA 57.239 45.000 0.00 0.00 0.00 3.27
123 125 4.499183 CCACGCTTCTTTCTGATTAGACT 58.501 43.478 0.00 0.00 31.21 3.24
129 131 6.292061 CGCTTCTTTCTGATTAGACTATGCAC 60.292 42.308 0.00 0.00 31.21 4.57
149 151 7.574021 TGCACTCCCTCCTTATCATATTATT 57.426 36.000 0.00 0.00 0.00 1.40
150 152 8.679344 TGCACTCCCTCCTTATCATATTATTA 57.321 34.615 0.00 0.00 0.00 0.98
236 242 9.023967 CAAACCTTTAACAGAATCACAGAAAAG 57.976 33.333 0.00 0.00 0.00 2.27
307 313 5.140177 GTCGCAACAGTTTATCTTGACTTG 58.860 41.667 0.00 0.00 0.00 3.16
313 319 4.275936 ACAGTTTATCTTGACTTGCCACAC 59.724 41.667 0.00 0.00 0.00 3.82
325 331 2.813179 GCCACACAGATAAGCGGCG 61.813 63.158 0.51 0.51 0.00 6.46
326 332 2.173669 CCACACAGATAAGCGGCGG 61.174 63.158 9.78 0.00 0.00 6.13
327 333 2.511600 ACACAGATAAGCGGCGGC 60.512 61.111 9.78 8.43 40.37 6.53
395 401 0.036306 AAACGGAAGGCAGGACGAAT 59.964 50.000 0.00 0.00 0.00 3.34
432 441 4.039245 CCTTATCCACGCTTCCTTCTGATA 59.961 45.833 0.00 0.00 0.00 2.15
433 442 5.279708 CCTTATCCACGCTTCCTTCTGATAT 60.280 44.000 0.00 0.00 0.00 1.63
465 480 9.906660 GTAAAAATTTAACACATGTGATCCTCA 57.093 29.630 31.94 10.73 0.00 3.86
468 483 9.829507 AAAATTTAACACATGTGATCCTCAAAA 57.170 25.926 31.94 16.47 0.00 2.44
504 1906 1.896220 AACACATGTGAACCGCAGAT 58.104 45.000 31.94 3.24 0.00 2.90
563 1965 1.953686 CAGTCTCTAGAGCTGGCTACC 59.046 57.143 24.83 5.74 32.65 3.18
569 1971 2.961741 TCTAGAGCTGGCTACCATTCTG 59.038 50.000 0.00 3.13 32.32 3.02
748 2150 3.093566 CGATCGATCGGCTGGTAAG 57.906 57.895 34.54 8.20 45.93 2.34
749 2151 0.387367 CGATCGATCGGCTGGTAAGG 60.387 60.000 34.54 7.49 45.93 2.69
750 2152 0.674534 GATCGATCGGCTGGTAAGGT 59.325 55.000 16.41 0.00 0.00 3.50
877 2279 0.664767 GGCGGTATAAGCAGCTCGAG 60.665 60.000 8.45 8.45 36.08 4.04
1172 2574 2.330041 CAACGCCGTTGGTGAACC 59.670 61.111 21.73 0.00 39.56 3.62
1183 2589 2.432628 GTGAACCTGCTAGCGCGT 60.433 61.111 10.77 5.39 39.65 6.01
1200 2610 2.852413 CGCGTTGTTATCCTAGTGTCTG 59.148 50.000 0.00 0.00 0.00 3.51
1267 2677 1.228033 TGCATGCCCATCAGATCGG 60.228 57.895 16.68 0.00 0.00 4.18
1268 2678 2.623915 GCATGCCCATCAGATCGGC 61.624 63.158 11.99 11.99 43.32 5.54
1291 2771 1.153469 GCTTCTTCCTCCTCTGCCG 60.153 63.158 0.00 0.00 0.00 5.69
1292 2772 1.153469 CTTCTTCCTCCTCTGCCGC 60.153 63.158 0.00 0.00 0.00 6.53
1293 2773 1.892819 CTTCTTCCTCCTCTGCCGCA 61.893 60.000 0.00 0.00 0.00 5.69
1294 2774 1.267574 TTCTTCCTCCTCTGCCGCAT 61.268 55.000 0.00 0.00 0.00 4.73
1295 2775 1.523258 CTTCCTCCTCTGCCGCATG 60.523 63.158 0.00 0.00 0.00 4.06
1296 2776 3.687321 TTCCTCCTCTGCCGCATGC 62.687 63.158 7.91 7.91 41.77 4.06
1341 2821 3.044873 AGCTAGCATTCTCTCCTCCTT 57.955 47.619 18.83 0.00 0.00 3.36
1346 2826 1.416030 GCATTCTCTCCTCCTTCTCCC 59.584 57.143 0.00 0.00 0.00 4.30
1347 2827 2.046292 CATTCTCTCCTCCTTCTCCCC 58.954 57.143 0.00 0.00 0.00 4.81
1348 2828 0.033011 TTCTCTCCTCCTTCTCCCCG 60.033 60.000 0.00 0.00 0.00 5.73
1398 2878 2.429571 GTCGCGCGGTTGTGTAGA 60.430 61.111 31.69 3.44 0.00 2.59
1415 3029 2.538512 AGAACGTAACTGAACCCACC 57.461 50.000 0.00 0.00 0.00 4.61
1452 3066 2.380084 TGAACGGCACTCTTATCCAC 57.620 50.000 0.00 0.00 0.00 4.02
1454 3068 0.892755 AACGGCACTCTTATCCACGA 59.107 50.000 0.00 0.00 0.00 4.35
1455 3069 0.892755 ACGGCACTCTTATCCACGAA 59.107 50.000 0.00 0.00 0.00 3.85
1456 3070 1.135083 ACGGCACTCTTATCCACGAAG 60.135 52.381 0.00 0.00 0.00 3.79
1457 3071 1.134367 CGGCACTCTTATCCACGAAGA 59.866 52.381 0.00 0.00 0.00 2.87
1459 3073 2.541556 GCACTCTTATCCACGAAGACC 58.458 52.381 0.00 0.00 0.00 3.85
1460 3074 2.166664 GCACTCTTATCCACGAAGACCT 59.833 50.000 0.00 0.00 0.00 3.85
1461 3075 3.368531 GCACTCTTATCCACGAAGACCTT 60.369 47.826 0.00 0.00 0.00 3.50
1462 3076 4.142227 GCACTCTTATCCACGAAGACCTTA 60.142 45.833 0.00 0.00 0.00 2.69
1463 3077 5.452077 GCACTCTTATCCACGAAGACCTTAT 60.452 44.000 0.00 0.00 0.00 1.73
1464 3078 6.238953 GCACTCTTATCCACGAAGACCTTATA 60.239 42.308 0.00 0.00 0.00 0.98
1465 3079 7.683704 GCACTCTTATCCACGAAGACCTTATAA 60.684 40.741 0.00 0.00 0.00 0.98
1466 3080 8.195436 CACTCTTATCCACGAAGACCTTATAAA 58.805 37.037 0.00 0.00 0.00 1.40
1467 3081 8.414778 ACTCTTATCCACGAAGACCTTATAAAG 58.585 37.037 0.00 0.00 0.00 1.85
1468 3082 8.302515 TCTTATCCACGAAGACCTTATAAAGT 57.697 34.615 0.00 0.00 0.00 2.66
1469 3083 9.412460 TCTTATCCACGAAGACCTTATAAAGTA 57.588 33.333 0.00 0.00 0.00 2.24
1470 3084 9.680315 CTTATCCACGAAGACCTTATAAAGTAG 57.320 37.037 0.00 0.00 0.00 2.57
1471 3085 7.657023 ATCCACGAAGACCTTATAAAGTAGT 57.343 36.000 0.00 0.00 0.00 2.73
1472 3086 8.757982 ATCCACGAAGACCTTATAAAGTAGTA 57.242 34.615 0.00 0.00 0.00 1.82
1473 3087 7.989826 TCCACGAAGACCTTATAAAGTAGTAC 58.010 38.462 0.00 0.00 0.00 2.73
1474 3088 7.611467 TCCACGAAGACCTTATAAAGTAGTACA 59.389 37.037 2.52 0.00 0.00 2.90
1475 3089 8.411683 CCACGAAGACCTTATAAAGTAGTACAT 58.588 37.037 2.52 0.00 0.00 2.29
1476 3090 9.798994 CACGAAGACCTTATAAAGTAGTACATT 57.201 33.333 2.52 0.00 0.00 2.71
1502 3116 4.965119 AGTTTAAATCCGTCATCTTGGC 57.035 40.909 0.00 0.00 0.00 4.52
1503 3117 4.331968 AGTTTAAATCCGTCATCTTGGCA 58.668 39.130 0.00 0.00 0.00 4.92
1504 3118 4.764823 AGTTTAAATCCGTCATCTTGGCAA 59.235 37.500 0.00 0.00 0.00 4.52
1505 3119 4.695217 TTAAATCCGTCATCTTGGCAAC 57.305 40.909 0.00 0.00 0.00 4.17
1517 3131 3.741029 TGGCAACATCTCTCGCTAC 57.259 52.632 0.00 0.00 46.17 3.58
1518 3132 1.186200 TGGCAACATCTCTCGCTACT 58.814 50.000 0.00 0.00 46.17 2.57
1519 3133 1.135139 TGGCAACATCTCTCGCTACTC 59.865 52.381 0.00 0.00 46.17 2.59
1520 3134 1.407258 GGCAACATCTCTCGCTACTCT 59.593 52.381 0.00 0.00 0.00 3.24
1521 3135 2.159170 GGCAACATCTCTCGCTACTCTT 60.159 50.000 0.00 0.00 0.00 2.85
1522 3136 3.066900 GGCAACATCTCTCGCTACTCTTA 59.933 47.826 0.00 0.00 0.00 2.10
1523 3137 4.261825 GGCAACATCTCTCGCTACTCTTAT 60.262 45.833 0.00 0.00 0.00 1.73
1524 3138 4.915085 GCAACATCTCTCGCTACTCTTATC 59.085 45.833 0.00 0.00 0.00 1.75
1525 3139 5.457140 CAACATCTCTCGCTACTCTTATCC 58.543 45.833 0.00 0.00 0.00 2.59
1526 3140 4.720046 ACATCTCTCGCTACTCTTATCCA 58.280 43.478 0.00 0.00 0.00 3.41
1527 3141 4.517453 ACATCTCTCGCTACTCTTATCCAC 59.483 45.833 0.00 0.00 0.00 4.02
1528 3142 4.425180 TCTCTCGCTACTCTTATCCACT 57.575 45.455 0.00 0.00 0.00 4.00
1529 3143 4.783055 TCTCTCGCTACTCTTATCCACTT 58.217 43.478 0.00 0.00 0.00 3.16
1530 3144 4.576873 TCTCTCGCTACTCTTATCCACTTG 59.423 45.833 0.00 0.00 0.00 3.16
1531 3145 4.524053 TCTCGCTACTCTTATCCACTTGA 58.476 43.478 0.00 0.00 0.00 3.02
1532 3146 5.133941 TCTCGCTACTCTTATCCACTTGAT 58.866 41.667 0.00 0.00 37.49 2.57
1533 3147 6.296803 TCTCGCTACTCTTATCCACTTGATA 58.703 40.000 0.00 0.00 34.76 2.15
1534 3148 6.771267 TCTCGCTACTCTTATCCACTTGATAA 59.229 38.462 0.00 0.00 42.36 1.75
1535 3149 7.284716 TCTCGCTACTCTTATCCACTTGATAAA 59.715 37.037 0.00 0.00 43.59 1.40
1536 3150 7.426410 TCGCTACTCTTATCCACTTGATAAAG 58.574 38.462 0.00 0.00 43.59 1.85
1537 3151 6.642950 CGCTACTCTTATCCACTTGATAAAGG 59.357 42.308 0.00 0.00 43.59 3.11
1538 3152 6.931840 GCTACTCTTATCCACTTGATAAAGGG 59.068 42.308 0.00 0.00 43.59 3.95
1539 3153 6.253946 ACTCTTATCCACTTGATAAAGGGG 57.746 41.667 4.43 4.43 43.59 4.79
1540 3154 5.731678 ACTCTTATCCACTTGATAAAGGGGT 59.268 40.000 11.19 1.53 43.59 4.95
1541 3155 6.001449 TCTTATCCACTTGATAAAGGGGTG 57.999 41.667 11.19 1.13 43.59 4.61
1542 3156 2.507407 TCCACTTGATAAAGGGGTGC 57.493 50.000 11.19 0.00 43.86 5.01
1543 3157 1.707989 TCCACTTGATAAAGGGGTGCA 59.292 47.619 11.19 0.00 43.86 4.57
1544 3158 2.094675 CCACTTGATAAAGGGGTGCAG 58.905 52.381 2.36 0.00 38.56 4.41
1545 3159 2.290896 CCACTTGATAAAGGGGTGCAGA 60.291 50.000 2.36 0.00 38.56 4.26
1546 3160 3.420893 CACTTGATAAAGGGGTGCAGAA 58.579 45.455 0.00 0.00 0.00 3.02
1547 3161 3.826157 CACTTGATAAAGGGGTGCAGAAA 59.174 43.478 0.00 0.00 0.00 2.52
1548 3162 4.463891 CACTTGATAAAGGGGTGCAGAAAT 59.536 41.667 0.00 0.00 0.00 2.17
1549 3163 4.463891 ACTTGATAAAGGGGTGCAGAAATG 59.536 41.667 0.00 0.00 0.00 2.32
1550 3164 2.760092 TGATAAAGGGGTGCAGAAATGC 59.240 45.455 0.00 0.00 0.00 3.56
1551 3165 2.603075 TAAAGGGGTGCAGAAATGCT 57.397 45.000 1.53 0.00 35.49 3.79
1564 3178 3.406764 AGAAATGCTGAGCCGAATATCC 58.593 45.455 0.23 0.00 0.00 2.59
1565 3179 2.936919 AATGCTGAGCCGAATATCCA 57.063 45.000 0.23 0.00 0.00 3.41
1566 3180 2.936919 ATGCTGAGCCGAATATCCAA 57.063 45.000 0.23 0.00 0.00 3.53
1567 3181 2.708216 TGCTGAGCCGAATATCCAAA 57.292 45.000 0.23 0.00 0.00 3.28
1568 3182 2.288666 TGCTGAGCCGAATATCCAAAC 58.711 47.619 0.23 0.00 0.00 2.93
1569 3183 1.604278 GCTGAGCCGAATATCCAAACC 59.396 52.381 0.00 0.00 0.00 3.27
1570 3184 2.746472 GCTGAGCCGAATATCCAAACCT 60.746 50.000 0.00 0.00 0.00 3.50
1571 3185 3.545703 CTGAGCCGAATATCCAAACCTT 58.454 45.455 0.00 0.00 0.00 3.50
1572 3186 3.947834 CTGAGCCGAATATCCAAACCTTT 59.052 43.478 0.00 0.00 0.00 3.11
1573 3187 3.945285 TGAGCCGAATATCCAAACCTTTC 59.055 43.478 0.00 0.00 0.00 2.62
1574 3188 3.945285 GAGCCGAATATCCAAACCTTTCA 59.055 43.478 0.00 0.00 0.00 2.69
1575 3189 3.694566 AGCCGAATATCCAAACCTTTCAC 59.305 43.478 0.00 0.00 0.00 3.18
1576 3190 3.181490 GCCGAATATCCAAACCTTTCACC 60.181 47.826 0.00 0.00 0.00 4.02
1577 3191 4.270008 CCGAATATCCAAACCTTTCACCT 58.730 43.478 0.00 0.00 0.00 4.00
1578 3192 5.433526 CCGAATATCCAAACCTTTCACCTA 58.566 41.667 0.00 0.00 0.00 3.08
1579 3193 5.883673 CCGAATATCCAAACCTTTCACCTAA 59.116 40.000 0.00 0.00 0.00 2.69
1580 3194 6.038271 CCGAATATCCAAACCTTTCACCTAAG 59.962 42.308 0.00 0.00 0.00 2.18
1581 3195 6.458342 CGAATATCCAAACCTTTCACCTAAGC 60.458 42.308 0.00 0.00 0.00 3.09
1582 3196 2.871453 TCCAAACCTTTCACCTAAGCC 58.129 47.619 0.00 0.00 0.00 4.35
1583 3197 2.445525 TCCAAACCTTTCACCTAAGCCT 59.554 45.455 0.00 0.00 0.00 4.58
1584 3198 3.653836 TCCAAACCTTTCACCTAAGCCTA 59.346 43.478 0.00 0.00 0.00 3.93
1585 3199 4.105057 TCCAAACCTTTCACCTAAGCCTAA 59.895 41.667 0.00 0.00 0.00 2.69
1586 3200 4.217767 CCAAACCTTTCACCTAAGCCTAAC 59.782 45.833 0.00 0.00 0.00 2.34
1587 3201 4.717279 AACCTTTCACCTAAGCCTAACA 57.283 40.909 0.00 0.00 0.00 2.41
1588 3202 4.929146 ACCTTTCACCTAAGCCTAACAT 57.071 40.909 0.00 0.00 0.00 2.71
1589 3203 4.844884 ACCTTTCACCTAAGCCTAACATC 58.155 43.478 0.00 0.00 0.00 3.06
1590 3204 4.288626 ACCTTTCACCTAAGCCTAACATCA 59.711 41.667 0.00 0.00 0.00 3.07
1591 3205 5.222048 ACCTTTCACCTAAGCCTAACATCAA 60.222 40.000 0.00 0.00 0.00 2.57
1592 3206 5.710099 CCTTTCACCTAAGCCTAACATCAAA 59.290 40.000 0.00 0.00 0.00 2.69
1593 3207 6.208599 CCTTTCACCTAAGCCTAACATCAAAA 59.791 38.462 0.00 0.00 0.00 2.44
1594 3208 6.817765 TTCACCTAAGCCTAACATCAAAAG 57.182 37.500 0.00 0.00 0.00 2.27
1595 3209 4.700213 TCACCTAAGCCTAACATCAAAAGC 59.300 41.667 0.00 0.00 0.00 3.51
1596 3210 4.017126 ACCTAAGCCTAACATCAAAAGCC 58.983 43.478 0.00 0.00 0.00 4.35
1597 3211 3.065371 CCTAAGCCTAACATCAAAAGCCG 59.935 47.826 0.00 0.00 0.00 5.52
1598 3212 2.489938 AGCCTAACATCAAAAGCCGA 57.510 45.000 0.00 0.00 0.00 5.54
1599 3213 2.790433 AGCCTAACATCAAAAGCCGAA 58.210 42.857 0.00 0.00 0.00 4.30
1600 3214 2.749621 AGCCTAACATCAAAAGCCGAAG 59.250 45.455 0.00 0.00 0.00 3.79
1650 3264 2.225267 GGGAGGAGGAGGAAGGAGATAG 60.225 59.091 0.00 0.00 0.00 2.08
1660 3274 0.824759 AAGGAGATAGCGTGTGACCC 59.175 55.000 0.00 0.00 0.00 4.46
1677 3291 3.489731 CAGCATGGTGGCACGTAG 58.510 61.111 17.24 4.52 35.83 3.51
1751 3365 0.674895 AGATTTGTCAGACCTGCCGC 60.675 55.000 0.00 0.00 0.00 6.53
1843 3478 3.661944 CATGCATGCTCTACCTTCTAGG 58.338 50.000 20.33 0.00 42.49 3.02
1845 3480 2.695666 TGCATGCTCTACCTTCTAGGAC 59.304 50.000 20.33 0.00 37.67 3.85
1847 3482 2.803030 TGCTCTACCTTCTAGGACGT 57.197 50.000 0.00 0.00 37.67 4.34
1851 3486 3.809279 GCTCTACCTTCTAGGACGTACTC 59.191 52.174 1.79 0.00 37.67 2.59
1852 3487 4.379652 CTCTACCTTCTAGGACGTACTCC 58.620 52.174 1.79 0.00 37.67 3.85
1854 3489 0.662085 CCTTCTAGGACGTACTCCGC 59.338 60.000 1.79 0.00 45.10 5.54
1858 3505 1.069823 TCTAGGACGTACTCCGCTAGG 59.930 57.143 1.79 0.00 45.10 3.02
1894 3541 4.101585 TCGATCCAAGTCCAAGCTTGATAT 59.898 41.667 28.05 9.59 46.34 1.63
1895 3542 5.304357 TCGATCCAAGTCCAAGCTTGATATA 59.696 40.000 28.05 7.31 46.34 0.86
1943 3590 2.190488 CTGCTGGGTGGAGGAGGAAC 62.190 65.000 0.00 0.00 0.00 3.62
1944 3591 2.982130 CTGGGTGGAGGAGGAACG 59.018 66.667 0.00 0.00 0.00 3.95
1945 3592 1.609501 CTGGGTGGAGGAGGAACGA 60.610 63.158 0.00 0.00 0.00 3.85
1946 3593 1.889530 CTGGGTGGAGGAGGAACGAC 61.890 65.000 0.00 0.00 0.00 4.34
1947 3594 2.572284 GGTGGAGGAGGAACGACG 59.428 66.667 0.00 0.00 0.00 5.12
1948 3595 1.975407 GGTGGAGGAGGAACGACGA 60.975 63.158 0.00 0.00 0.00 4.20
1949 3596 1.321074 GGTGGAGGAGGAACGACGAT 61.321 60.000 0.00 0.00 0.00 3.73
1976 3623 1.076533 GTGACCGAGCATGGTACGTG 61.077 60.000 0.00 1.37 44.01 4.49
1991 3638 2.255252 GTGCGGTGGTACGTACGT 59.745 61.111 25.98 25.98 39.46 3.57
2110 3758 1.609555 ACTATTCGATCGGGCAGACTC 59.390 52.381 16.41 0.00 0.00 3.36
2177 3829 5.335348 GCATGCTCTAGCTTCTAGGTAGTAC 60.335 48.000 11.37 0.00 44.37 2.73
2204 3856 2.269023 TGACATGTGGGATCCAAGTCT 58.731 47.619 15.23 0.00 34.18 3.24
2210 3862 3.719871 TGTGGGATCCAAGTCTAAGCTA 58.280 45.455 15.23 0.00 34.18 3.32
2249 3901 4.712337 ACTCCTACCTATCAAGTTGGACTG 59.288 45.833 2.34 0.00 34.77 3.51
2255 3907 0.036010 ATCAAGTTGGACTGCTCGGG 60.036 55.000 2.34 0.00 0.00 5.14
2256 3908 1.672356 CAAGTTGGACTGCTCGGGG 60.672 63.158 0.00 0.00 0.00 5.73
2284 3947 9.480053 GTCAAGTTGGTGTTTTACTGTAGTATA 57.520 33.333 2.34 0.00 0.00 1.47
2289 4075 7.837202 TGGTGTTTTACTGTAGTATATGCAC 57.163 36.000 0.00 2.28 0.00 4.57
2312 4121 7.168637 GCACATGCATGGAAGAATTGTTAATAG 59.831 37.037 29.41 0.00 41.59 1.73
2348 4157 6.803154 AGTCCAAGCTTTCATACTGTAAAC 57.197 37.500 0.00 0.00 0.00 2.01
2350 4159 4.693566 TCCAAGCTTTCATACTGTAAACGG 59.306 41.667 0.00 0.00 0.00 4.44
2471 4280 3.202906 CGTCTTCTCCAACACCTTCAAA 58.797 45.455 0.00 0.00 0.00 2.69
2619 4428 0.526211 CCAACGATCGTCTCTCACCA 59.474 55.000 22.98 0.00 0.00 4.17
2620 4429 1.135139 CCAACGATCGTCTCTCACCAT 59.865 52.381 22.98 0.00 0.00 3.55
2621 4430 2.357952 CCAACGATCGTCTCTCACCATA 59.642 50.000 22.98 0.00 0.00 2.74
2622 4431 3.364062 CAACGATCGTCTCTCACCATAC 58.636 50.000 22.98 0.00 0.00 2.39
2623 4432 2.640184 ACGATCGTCTCTCACCATACA 58.360 47.619 16.60 0.00 0.00 2.29
2624 4433 2.614520 ACGATCGTCTCTCACCATACAG 59.385 50.000 16.60 0.00 0.00 2.74
2625 4434 2.872858 CGATCGTCTCTCACCATACAGA 59.127 50.000 7.03 0.00 0.00 3.41
2628 4437 3.215151 TCGTCTCTCACCATACAGATCC 58.785 50.000 0.00 0.00 0.00 3.36
2629 4438 2.952310 CGTCTCTCACCATACAGATCCA 59.048 50.000 0.00 0.00 0.00 3.41
2630 4439 3.571828 CGTCTCTCACCATACAGATCCAT 59.428 47.826 0.00 0.00 0.00 3.41
2631 4440 4.558296 CGTCTCTCACCATACAGATCCATG 60.558 50.000 0.00 0.00 0.00 3.66
2633 4442 4.343239 TCTCTCACCATACAGATCCATGTG 59.657 45.833 0.00 0.00 34.56 3.21
2649 4477 3.118519 CCATGTGTCATCTGAGACCATCA 60.119 47.826 5.17 0.00 37.51 3.07
2650 4478 4.444449 CCATGTGTCATCTGAGACCATCAT 60.444 45.833 5.17 0.00 37.51 2.45
2664 4492 8.120140 TGAGACCATCATATATCAGTCTGAAG 57.880 38.462 6.64 0.00 34.84 3.02
2687 4543 1.003355 AACACCTACGCATGCTGCT 60.003 52.632 17.13 0.07 42.25 4.24
2985 5252 4.336153 CGGTACTCCTCCTCTCTTTCTTAC 59.664 50.000 0.00 0.00 0.00 2.34
3015 5287 3.738434 TGACAGGGGCCTAATAACCTTA 58.262 45.455 0.84 0.00 0.00 2.69
3146 5418 7.870509 AATACAGTACCGAGATGTGTACTAA 57.129 36.000 2.33 0.00 44.33 2.24
3161 5433 3.508402 TGTACTAACACGCATTCTCTCCA 59.492 43.478 0.00 0.00 0.00 3.86
3197 5471 8.847567 CGATTTATATGTGAGTGTACGTAATCC 58.152 37.037 0.00 0.00 0.00 3.01
3200 5474 9.687210 TTTATATGTGAGTGTACGTAATCCATC 57.313 33.333 0.00 0.00 0.00 3.51
3339 5697 2.869233 TGAGAGCAAAACTGCAAACC 57.131 45.000 0.00 0.00 37.25 3.27
3371 5729 6.761099 TCAGTTTAAACCAACTAGTTGCAA 57.239 33.333 27.05 15.42 39.16 4.08
3517 5882 6.093219 CAGGATCAAGTTTGACATAGGACTTG 59.907 42.308 8.38 8.38 46.34 3.16
3518 5883 5.355350 GGATCAAGTTTGACATAGGACTTGG 59.645 44.000 13.24 0.00 45.50 3.61
3519 5884 4.651778 TCAAGTTTGACATAGGACTTGGG 58.348 43.478 13.24 0.00 45.50 4.12
3520 5885 4.349636 TCAAGTTTGACATAGGACTTGGGA 59.650 41.667 13.24 0.00 45.50 4.37
3521 5886 4.287766 AGTTTGACATAGGACTTGGGAC 57.712 45.455 0.00 0.00 0.00 4.46
3522 5887 3.910627 AGTTTGACATAGGACTTGGGACT 59.089 43.478 0.00 0.00 0.00 3.85
3523 5888 4.351111 AGTTTGACATAGGACTTGGGACTT 59.649 41.667 0.00 0.00 0.00 3.01
3610 5976 0.618981 ATCTGGGGAAGGAAACGACC 59.381 55.000 0.00 0.00 0.00 4.79
3644 6010 8.305317 ACTTTCACCTACATTTCTACAGACTAC 58.695 37.037 0.00 0.00 0.00 2.73
3647 6013 6.037098 CACCTACATTTCTACAGACTACAGC 58.963 44.000 0.00 0.00 0.00 4.40
3652 6047 9.209175 CTACATTTCTACAGACTACAGCTTTTT 57.791 33.333 0.00 0.00 0.00 1.94
3691 6086 8.173542 TGATTCCTGATGATATGATTTGGTTG 57.826 34.615 0.00 0.00 0.00 3.77
3746 7195 7.770433 CAGTGGGTATTCTGATATTGTTCTTCA 59.230 37.037 0.00 0.00 34.02 3.02
3870 7319 1.338973 GTACGATATCGGCACCCTGAA 59.661 52.381 27.58 0.57 44.95 3.02
4042 7491 1.597742 CACACTGGTCAGTTTCAGGG 58.402 55.000 0.20 0.00 40.20 4.45
4047 7496 1.603739 GGTCAGTTTCAGGGGGTGC 60.604 63.158 0.00 0.00 0.00 5.01
4057 7506 1.837439 TCAGGGGGTGCTGTACTATTG 59.163 52.381 0.00 0.00 0.00 1.90
4113 7564 3.202151 ACTGAACTTTCTTTCTGTGGGGA 59.798 43.478 0.00 0.00 36.59 4.81
4114 7565 3.551846 TGAACTTTCTTTCTGTGGGGAC 58.448 45.455 0.00 0.00 0.00 4.46
4115 7566 3.202151 TGAACTTTCTTTCTGTGGGGACT 59.798 43.478 0.00 0.00 0.00 3.85
4116 7567 3.214696 ACTTTCTTTCTGTGGGGACTG 57.785 47.619 0.00 0.00 0.00 3.51
4117 7568 2.158608 ACTTTCTTTCTGTGGGGACTGG 60.159 50.000 0.00 0.00 0.00 4.00
4118 7569 0.771127 TTCTTTCTGTGGGGACTGGG 59.229 55.000 0.00 0.00 0.00 4.45
4119 7570 1.133809 TCTTTCTGTGGGGACTGGGG 61.134 60.000 0.00 0.00 0.00 4.96
4271 7766 9.606631 TTACACTACATGATGCATTACACAATA 57.393 29.630 0.00 0.00 0.00 1.90
4386 7881 4.321527 GGAAGATTTCCTTTGACTGCCAAG 60.322 45.833 0.61 0.00 46.57 3.61
4413 7908 3.849574 TGAAGATACTCCCACCATTCCAA 59.150 43.478 0.00 0.00 0.00 3.53
4437 7932 5.061721 AGGTTTTTGGTATGGACAGAGTT 57.938 39.130 0.00 0.00 0.00 3.01
4495 7990 7.754924 CCCAAACATGTAAACTTGCATAACTAG 59.245 37.037 0.00 0.00 32.12 2.57
4584 8080 5.452777 AGCGACAGTGAAAATTAAAGAAGC 58.547 37.500 0.00 0.00 0.00 3.86
4678 8290 7.286775 ACCATACACTGTGTTGTTTATTTCCTT 59.713 33.333 19.73 0.00 0.00 3.36
4712 8324 8.906867 CCATCACCTTTTCAATATGATTAGTGT 58.093 33.333 0.00 0.00 0.00 3.55
4900 8513 1.448540 CCTCAGGACGCACATGGAC 60.449 63.158 0.00 0.00 0.00 4.02
4928 8541 6.525121 TGATAATATCCAACGCTTTCTTCG 57.475 37.500 0.00 0.00 0.00 3.79
4930 8543 6.759356 TGATAATATCCAACGCTTTCTTCGAA 59.241 34.615 0.00 0.00 0.00 3.71
4949 8562 7.494625 TCTTCGAATCCATTCCAAGTATGTAAC 59.505 37.037 0.00 0.00 36.69 2.50
4963 8576 6.786967 AGTATGTAACCGACAAGATACCTT 57.213 37.500 0.00 0.00 42.78 3.50
4968 8581 7.325660 TGTAACCGACAAGATACCTTACTAG 57.674 40.000 0.00 0.00 34.15 2.57
4970 8583 5.831702 ACCGACAAGATACCTTACTAGTG 57.168 43.478 5.39 0.00 0.00 2.74
4973 8586 7.059156 ACCGACAAGATACCTTACTAGTGTAT 58.941 38.462 5.39 4.84 0.00 2.29
4974 8587 8.213679 ACCGACAAGATACCTTACTAGTGTATA 58.786 37.037 5.39 0.00 0.00 1.47
4975 8588 8.502387 CCGACAAGATACCTTACTAGTGTATAC 58.498 40.741 5.39 0.00 0.00 1.47
4976 8589 9.049523 CGACAAGATACCTTACTAGTGTATACA 57.950 37.037 5.39 0.08 0.00 2.29
4997 8645 6.374565 ACAGTACTACTATTCTGTAAGCCG 57.625 41.667 0.00 0.00 39.01 5.52
5013 8661 2.991250 AGCCGTGCATCAGAAACTAAT 58.009 42.857 0.00 0.00 0.00 1.73
5074 8722 0.791983 CGTTCGTTCTCGCGCTTCTA 60.792 55.000 5.56 0.00 36.96 2.10
5080 8728 0.526211 TTCTCGCGCTTCTAGCTTCA 59.474 50.000 5.56 0.00 39.60 3.02
5172 8820 0.249073 CCGAGGGTGAAGATACTGCG 60.249 60.000 0.00 0.00 0.00 5.18
5315 8963 5.105797 GGTAAGAAATGCATCCAACACATGA 60.106 40.000 0.00 0.00 0.00 3.07
5330 8978 8.081633 TCCAACACATGATTGAACAGAAAATAC 58.918 33.333 13.75 0.00 0.00 1.89
5336 8984 9.683069 ACATGATTGAACAGAAAATACAGTTTC 57.317 29.630 0.00 0.00 37.70 2.78
5367 9015 0.107456 CATGCCTCTTAGCGGTGGAT 59.893 55.000 0.00 0.00 34.65 3.41
5369 9017 1.069935 GCCTCTTAGCGGTGGATCC 59.930 63.158 4.20 4.20 0.00 3.36
5381 9029 2.428171 CGGTGGATCCCTTCTAAACGTA 59.572 50.000 9.90 0.00 0.00 3.57
5403 9052 7.801315 ACGTAACAGTGTGCTATTTAAAATGTG 59.199 33.333 0.00 0.00 0.00 3.21
5428 9077 3.897239 TCATGTGTTTGGACCAAAGTCT 58.103 40.909 20.14 2.95 43.05 3.24
5438 9087 2.239907 GGACCAAAGTCTCTTAGCCCAT 59.760 50.000 0.00 0.00 43.05 4.00
5504 9153 7.451732 ACAGAAATCTATGCATGCTTATCTCT 58.548 34.615 20.33 12.11 0.00 3.10
5614 9263 1.352352 CTCCTGGTGTGGAAGGTGAAT 59.648 52.381 0.00 0.00 35.43 2.57
5632 9281 1.188219 ATATCTGGTGGATCGCCGCT 61.188 55.000 0.00 0.00 44.31 5.52
5695 9344 1.577468 CGGTGCTGTACAAGTTCACA 58.423 50.000 14.81 0.00 0.00 3.58
5884 9533 1.206371 GGCCTTTTCTACACGGAGCTA 59.794 52.381 0.00 0.00 0.00 3.32
6208 9857 2.953020 AGCATTCGGATCGATAGCTTC 58.047 47.619 0.00 0.00 41.14 3.86
6313 9962 1.135431 CAGTCCTTCTCTGAGCTCACG 60.135 57.143 13.74 9.51 35.20 4.35
6366 10015 3.057315 CCGCAATTTCAGGTGAACAATCT 60.057 43.478 0.00 0.00 33.13 2.40
6368 10017 5.088739 CGCAATTTCAGGTGAACAATCTAC 58.911 41.667 0.00 0.00 33.13 2.59
6371 10020 5.862924 ATTTCAGGTGAACAATCTACACG 57.137 39.130 0.00 0.00 35.68 4.49
6382 10031 3.994392 ACAATCTACACGCCAACTACAAG 59.006 43.478 0.00 0.00 0.00 3.16
6386 10035 2.762535 ACACGCCAACTACAAGCTAT 57.237 45.000 0.00 0.00 0.00 2.97
6387 10036 3.880047 ACACGCCAACTACAAGCTATA 57.120 42.857 0.00 0.00 0.00 1.31
6388 10037 4.402056 ACACGCCAACTACAAGCTATAT 57.598 40.909 0.00 0.00 0.00 0.86
6389 10038 4.766375 ACACGCCAACTACAAGCTATATT 58.234 39.130 0.00 0.00 0.00 1.28
6390 10039 4.809426 ACACGCCAACTACAAGCTATATTC 59.191 41.667 0.00 0.00 0.00 1.75
6391 10040 5.050490 CACGCCAACTACAAGCTATATTCT 58.950 41.667 0.00 0.00 0.00 2.40
6393 10042 5.069251 ACGCCAACTACAAGCTATATTCTCT 59.931 40.000 0.00 0.00 0.00 3.10
6395 10044 7.145985 CGCCAACTACAAGCTATATTCTCTTA 58.854 38.462 0.00 0.00 0.00 2.10
6397 10046 9.145865 GCCAACTACAAGCTATATTCTCTTATC 57.854 37.037 0.00 0.00 0.00 1.75
6421 10070 8.571461 TCAAGAATTAGTTGCATTTCTCATCT 57.429 30.769 0.00 0.00 0.00 2.90
6422 10071 9.671279 TCAAGAATTAGTTGCATTTCTCATCTA 57.329 29.630 0.00 0.00 0.00 1.98
6431 10080 8.918116 AGTTGCATTTCTCATCTATACTCTACA 58.082 33.333 0.00 0.00 0.00 2.74
6432 10081 9.703892 GTTGCATTTCTCATCTATACTCTACAT 57.296 33.333 0.00 0.00 0.00 2.29
6451 10150 7.520798 TCTACATTATTGGCTGGATCTGATTT 58.479 34.615 0.00 0.00 0.00 2.17
6454 10153 7.270047 ACATTATTGGCTGGATCTGATTTTTG 58.730 34.615 0.00 0.00 0.00 2.44
6455 10154 4.748277 ATTGGCTGGATCTGATTTTTGG 57.252 40.909 0.00 0.00 0.00 3.28
6460 10159 4.706962 GGCTGGATCTGATTTTTGGTACTT 59.293 41.667 0.00 0.00 0.00 2.24
6461 10160 5.393461 GGCTGGATCTGATTTTTGGTACTTG 60.393 44.000 0.00 0.00 0.00 3.16
6464 10163 7.214467 TGGATCTGATTTTTGGTACTTGTTC 57.786 36.000 0.00 0.00 0.00 3.18
6466 10165 7.174946 TGGATCTGATTTTTGGTACTTGTTCTC 59.825 37.037 0.00 0.00 0.00 2.87
6467 10166 7.174946 GGATCTGATTTTTGGTACTTGTTCTCA 59.825 37.037 0.00 0.00 0.00 3.27
6468 10167 7.259290 TCTGATTTTTGGTACTTGTTCTCAC 57.741 36.000 0.00 0.00 0.00 3.51
6469 10168 6.826231 TCTGATTTTTGGTACTTGTTCTCACA 59.174 34.615 0.00 0.00 0.00 3.58
6470 10169 7.502226 TCTGATTTTTGGTACTTGTTCTCACAT 59.498 33.333 0.00 0.00 31.06 3.21
6664 10365 2.775911 TCCTACGGAAGAACTCTCGA 57.224 50.000 0.00 0.00 0.00 4.04
6703 10404 2.282180 ATTCCACGCGGGCAACTT 60.282 55.556 12.47 0.00 36.21 2.66
6853 10554 1.340465 GCGTGCGAACATACGTCTG 59.660 57.895 0.00 0.00 41.98 3.51
6858 10559 1.082117 GCGAACATACGTCTGTGGGG 61.082 60.000 7.40 1.70 35.59 4.96
6859 10560 1.082117 CGAACATACGTCTGTGGGGC 61.082 60.000 7.40 0.00 0.00 5.80
6860 10561 0.036765 GAACATACGTCTGTGGGGCA 60.037 55.000 7.40 0.00 0.00 5.36
6877 10578 3.385755 GGGGCAGCAGAATGAATGTATTT 59.614 43.478 0.00 0.00 39.69 1.40
6904 10605 1.710013 ACAAGAACGTATGTCTGCGG 58.290 50.000 0.00 0.00 34.49 5.69
6905 10606 1.271379 ACAAGAACGTATGTCTGCGGA 59.729 47.619 0.00 0.00 34.49 5.54
6910 10621 1.022735 ACGTATGTCTGCGGAGTAGG 58.977 55.000 3.10 0.77 41.75 3.18
6937 10648 9.710900 CATCTTATTAGTCATGTTGGCTATGTA 57.289 33.333 0.00 0.00 34.15 2.29
6953 10664 4.884164 GCTATGTATTTTGCCTCCTCTTGT 59.116 41.667 0.00 0.00 0.00 3.16
6955 10666 4.365514 TGTATTTTGCCTCCTCTTGTCA 57.634 40.909 0.00 0.00 0.00 3.58
6962 10673 2.840038 TGCCTCCTCTTGTCATGTATGT 59.160 45.455 0.00 0.00 0.00 2.29
6963 10674 3.118629 TGCCTCCTCTTGTCATGTATGTC 60.119 47.826 0.00 0.00 0.00 3.06
6964 10675 3.133721 GCCTCCTCTTGTCATGTATGTCT 59.866 47.826 0.00 0.00 0.00 3.41
6971 10682 5.664457 TCTTGTCATGTATGTCTGATGTCC 58.336 41.667 0.00 0.00 0.00 4.02
6983 10694 1.536766 CTGATGTCCGTTGTGTGCATT 59.463 47.619 0.00 0.00 0.00 3.56
6986 10697 0.943673 TGTCCGTTGTGTGCATTCTG 59.056 50.000 0.00 0.00 0.00 3.02
6988 10699 1.195448 GTCCGTTGTGTGCATTCTGAG 59.805 52.381 0.00 0.00 0.00 3.35
6992 10703 3.181517 CCGTTGTGTGCATTCTGAGTATG 60.182 47.826 0.00 0.00 0.00 2.39
6993 10704 3.725895 CGTTGTGTGCATTCTGAGTATGC 60.726 47.826 15.91 15.91 46.63 3.14
7000 10711 2.686915 GCATTCTGAGTATGCAAAGGCT 59.313 45.455 17.52 0.00 45.93 4.58
7003 10714 1.908619 TCTGAGTATGCAAAGGCTGGA 59.091 47.619 0.00 0.00 41.91 3.86
7013 10724 2.507484 CAAAGGCTGGATGTGAACTCA 58.493 47.619 0.00 0.00 0.00 3.41
7016 10727 2.719739 AGGCTGGATGTGAACTCATTG 58.280 47.619 0.00 0.00 0.00 2.82
7022 10733 3.253921 TGGATGTGAACTCATTGTGCTTG 59.746 43.478 0.00 0.00 0.00 4.01
7036 10747 2.308570 TGTGCTTGTATCCCCTTGATGT 59.691 45.455 0.00 0.00 34.76 3.06
7049 10760 5.964477 TCCCCTTGATGTGACTCTATAAGTT 59.036 40.000 0.00 0.00 38.74 2.66
7072 10783 9.778479 AGTTAATAAAAGGGCCCTTTACTAAAT 57.222 29.630 42.99 32.48 44.50 1.40
7077 10788 6.605471 AAAGGGCCCTTTACTAAATGAAAG 57.395 37.500 42.54 0.00 43.58 2.62
7079 10790 5.262009 AGGGCCCTTTACTAAATGAAAGAC 58.738 41.667 22.28 0.00 35.12 3.01
7097 10808 6.377429 TGAAAGACGTATATCTATGGGGCTAG 59.623 42.308 0.00 0.00 0.00 3.42
7101 10812 5.194432 ACGTATATCTATGGGGCTAGACAG 58.806 45.833 0.00 0.00 30.77 3.51
7106 10817 2.786445 TCTATGGGGCTAGACAGAGAGT 59.214 50.000 0.00 0.00 30.73 3.24
7128 10839 5.128827 AGTCCTCTAATAAGGAATTGCGTCA 59.871 40.000 0.00 0.00 46.90 4.35
7130 10841 5.128827 TCCTCTAATAAGGAATTGCGTCAGT 59.871 40.000 0.00 0.00 42.56 3.41
7149 10860 8.388103 GCGTCAGTTTTCATTATTACACACTAT 58.612 33.333 0.00 0.00 0.00 2.12
7172 10883 9.705290 CTATGTACCACATATTGTTGCTATGTA 57.295 33.333 0.00 0.00 40.01 2.29
7204 10941 7.446625 ACCTAAATGAGATGTTCAATAGGATGC 59.553 37.037 18.47 0.00 44.45 3.91
7217 10954 4.647564 ATAGGATGCCCTTGGATGTTAG 57.352 45.455 0.00 0.00 40.78 2.34
7244 10981 5.869579 GGAGACCAATCAAGATAATGGCTA 58.130 41.667 1.59 0.00 36.37 3.93
7245 10982 6.299141 GGAGACCAATCAAGATAATGGCTAA 58.701 40.000 1.59 0.00 36.37 3.09
7246 10983 6.429385 GGAGACCAATCAAGATAATGGCTAAG 59.571 42.308 1.59 0.00 36.37 2.18
7248 10985 8.034313 AGACCAATCAAGATAATGGCTAAGTA 57.966 34.615 1.59 0.00 36.37 2.24
7249 10986 8.153550 AGACCAATCAAGATAATGGCTAAGTAG 58.846 37.037 1.59 0.00 36.37 2.57
7266 11030 7.416777 GGCTAAGTAGAATGGGAAGAAAATTGG 60.417 40.741 0.00 0.00 0.00 3.16
7289 11053 4.040047 TGGAGAAAATGCTAGATGGGAGA 58.960 43.478 0.00 0.00 0.00 3.71
7290 11054 4.662179 TGGAGAAAATGCTAGATGGGAGAT 59.338 41.667 0.00 0.00 0.00 2.75
7291 11055 5.846164 TGGAGAAAATGCTAGATGGGAGATA 59.154 40.000 0.00 0.00 0.00 1.98
7292 11056 6.013898 TGGAGAAAATGCTAGATGGGAGATAG 60.014 42.308 0.00 0.00 0.00 2.08
7293 11057 5.803552 AGAAAATGCTAGATGGGAGATAGC 58.196 41.667 0.00 0.00 41.82 2.97
7294 11058 4.566426 AAATGCTAGATGGGAGATAGCC 57.434 45.455 0.00 0.00 40.97 3.93
7295 11059 3.488355 ATGCTAGATGGGAGATAGCCT 57.512 47.619 0.00 0.00 40.97 4.58
7296 11060 2.813907 TGCTAGATGGGAGATAGCCTC 58.186 52.381 0.00 0.00 40.97 4.70
7297 11061 2.381618 TGCTAGATGGGAGATAGCCTCT 59.618 50.000 0.00 0.00 40.97 3.69
7298 11062 2.760092 GCTAGATGGGAGATAGCCTCTG 59.240 54.545 0.00 0.00 41.66 3.35
7319 11091 9.202273 CCTCTGCTTACATAGAGAAATCATAAC 57.798 37.037 0.00 0.00 42.34 1.89
7330 11102 3.011708 AGAAATCATAACAGGCCAAGGGT 59.988 43.478 5.01 0.00 0.00 4.34
7334 11106 2.916934 TCATAACAGGCCAAGGGTACTT 59.083 45.455 5.01 0.00 37.43 2.24
7356 11128 5.298989 TGGAACTACAAGTGTGTATTGGT 57.701 39.130 0.00 0.00 39.51 3.67
7357 11129 5.302360 TGGAACTACAAGTGTGTATTGGTC 58.698 41.667 0.00 0.00 39.51 4.02
7360 14121 7.038587 TGGAACTACAAGTGTGTATTGGTCTAT 60.039 37.037 0.00 0.00 39.51 1.98
7587 14547 6.182627 TGCACTGAATTATGAAACAGAGGAT 58.817 36.000 0.00 0.00 34.88 3.24
7588 14548 6.660521 TGCACTGAATTATGAAACAGAGGATT 59.339 34.615 0.00 0.00 34.88 3.01
7590 14550 7.699812 GCACTGAATTATGAAACAGAGGATTTC 59.300 37.037 0.00 0.00 36.73 2.17
7591 14551 8.733458 CACTGAATTATGAAACAGAGGATTTCA 58.267 33.333 0.00 2.89 46.96 2.69
7592 14552 8.734386 ACTGAATTATGAAACAGAGGATTTCAC 58.266 33.333 2.47 0.00 46.05 3.18
7596 14556 2.084546 GAAACAGAGGATTTCACCCCG 58.915 52.381 0.00 0.00 36.31 5.73
7597 14557 1.358152 AACAGAGGATTTCACCCCGA 58.642 50.000 0.00 0.00 0.00 5.14
7598 14558 1.358152 ACAGAGGATTTCACCCCGAA 58.642 50.000 0.00 0.00 0.00 4.30
7599 14559 8.889263 ATGAAACAGAGGATTTCACCCCGAAA 62.889 42.308 2.47 0.00 46.05 3.46
7600 14560 2.084546 CAGAGGATTTCACCCCGAAAC 58.915 52.381 0.00 0.00 46.22 2.78
7601 14561 1.702957 AGAGGATTTCACCCCGAAACA 59.297 47.619 0.00 0.00 46.22 2.83
7602 14562 2.107552 AGAGGATTTCACCCCGAAACAA 59.892 45.455 0.00 0.00 46.22 2.83
7604 14564 2.158519 AGGATTTCACCCCGAAACAACT 60.159 45.455 0.00 0.00 46.22 3.16
7605 14565 2.228103 GGATTTCACCCCGAAACAACTC 59.772 50.000 0.00 0.00 46.22 3.01
7606 14566 1.301423 TTTCACCCCGAAACAACTCG 58.699 50.000 0.00 0.00 38.72 4.18
7607 14567 1.161563 TTCACCCCGAAACAACTCGC 61.162 55.000 0.00 0.00 37.51 5.03
7611 14571 1.006832 CCCCGAAACAACTCGCTATG 58.993 55.000 0.00 0.00 37.51 2.23
7615 14575 3.424433 CCCGAAACAACTCGCTATGAAAC 60.424 47.826 0.00 0.00 37.51 2.78
7616 14576 3.185594 CCGAAACAACTCGCTATGAAACA 59.814 43.478 0.00 0.00 37.51 2.83
7618 14578 4.149922 CGAAACAACTCGCTATGAAACAGA 59.850 41.667 0.00 0.00 31.04 3.41
7619 14579 5.597813 AAACAACTCGCTATGAAACAGAG 57.402 39.130 0.00 0.00 35.28 3.35
7620 14580 4.521130 ACAACTCGCTATGAAACAGAGA 57.479 40.909 0.00 0.00 33.53 3.10
7623 14583 6.631016 ACAACTCGCTATGAAACAGAGATTA 58.369 36.000 0.00 0.00 33.53 1.75
7625 14585 7.766278 ACAACTCGCTATGAAACAGAGATTAAT 59.234 33.333 0.00 0.00 33.53 1.40
7626 14586 7.938563 ACTCGCTATGAAACAGAGATTAATC 57.061 36.000 7.41 7.41 33.53 1.75
7627 14587 7.492524 ACTCGCTATGAAACAGAGATTAATCA 58.507 34.615 17.56 0.00 33.53 2.57
7630 14590 9.981114 TCGCTATGAAACAGAGATTAATCATAA 57.019 29.630 17.56 0.00 31.52 1.90
7693 14781 4.929819 ATAAATTGCGGTATTTCACCCC 57.070 40.909 0.00 0.00 45.52 4.95
7725 14813 5.180271 AGTTTAAACTGAAACACTGTCCGA 58.820 37.500 19.94 0.00 41.00 4.55
7729 14817 2.822764 ACTGAAACACTGTCCGAAGTC 58.177 47.619 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 8.723311 CCGACCAAGATTACAACTAATAACAAA 58.277 33.333 0.00 0.00 0.00 2.83
13 14 7.879160 ACCGACCAAGATTACAACTAATAACAA 59.121 33.333 0.00 0.00 0.00 2.83
14 15 7.332430 CACCGACCAAGATTACAACTAATAACA 59.668 37.037 0.00 0.00 0.00 2.41
15 16 7.201582 CCACCGACCAAGATTACAACTAATAAC 60.202 40.741 0.00 0.00 0.00 1.89
16 17 6.819649 CCACCGACCAAGATTACAACTAATAA 59.180 38.462 0.00 0.00 0.00 1.40
17 18 6.154877 TCCACCGACCAAGATTACAACTAATA 59.845 38.462 0.00 0.00 0.00 0.98
18 19 5.046159 TCCACCGACCAAGATTACAACTAAT 60.046 40.000 0.00 0.00 0.00 1.73
19 20 4.283978 TCCACCGACCAAGATTACAACTAA 59.716 41.667 0.00 0.00 0.00 2.24
20 21 3.833650 TCCACCGACCAAGATTACAACTA 59.166 43.478 0.00 0.00 0.00 2.24
21 22 2.635915 TCCACCGACCAAGATTACAACT 59.364 45.455 0.00 0.00 0.00 3.16
22 23 3.048337 TCCACCGACCAAGATTACAAC 57.952 47.619 0.00 0.00 0.00 3.32
23 24 3.262151 TCATCCACCGACCAAGATTACAA 59.738 43.478 0.00 0.00 0.00 2.41
24 25 2.835156 TCATCCACCGACCAAGATTACA 59.165 45.455 0.00 0.00 0.00 2.41
25 26 3.118738 AGTCATCCACCGACCAAGATTAC 60.119 47.826 0.00 0.00 33.70 1.89
26 27 3.104512 AGTCATCCACCGACCAAGATTA 58.895 45.455 0.00 0.00 33.70 1.75
27 28 1.909302 AGTCATCCACCGACCAAGATT 59.091 47.619 0.00 0.00 33.70 2.40
36 37 8.804688 TTTTTAATTAACAAAGTCATCCACCG 57.195 30.769 0.00 0.00 0.00 4.94
57 58 7.830739 AGTAGAGCCGAATGAAATCAATTTTT 58.169 30.769 0.00 0.00 0.00 1.94
58 59 7.396540 AGTAGAGCCGAATGAAATCAATTTT 57.603 32.000 0.00 0.00 0.00 1.82
61 62 8.506168 TTTTAGTAGAGCCGAATGAAATCAAT 57.494 30.769 0.00 0.00 0.00 2.57
63 64 7.327975 TCTTTTAGTAGAGCCGAATGAAATCA 58.672 34.615 0.00 0.00 0.00 2.57
65 66 8.561738 TTTCTTTTAGTAGAGCCGAATGAAAT 57.438 30.769 0.00 0.00 0.00 2.17
83 85 6.687604 AGCGTGGCATAAGTTTATTTCTTTT 58.312 32.000 0.00 0.00 0.00 2.27
85 87 5.897377 AGCGTGGCATAAGTTTATTTCTT 57.103 34.783 0.00 0.00 0.00 2.52
86 88 5.648092 AGAAGCGTGGCATAAGTTTATTTCT 59.352 36.000 0.00 0.00 0.00 2.52
87 89 5.880341 AGAAGCGTGGCATAAGTTTATTTC 58.120 37.500 0.00 0.00 0.00 2.17
88 90 5.897377 AGAAGCGTGGCATAAGTTTATTT 57.103 34.783 0.00 0.00 0.00 1.40
91 93 5.001232 AGAAAGAAGCGTGGCATAAGTTTA 58.999 37.500 0.00 0.00 0.00 2.01
105 107 6.760770 AGTGCATAGTCTAATCAGAAAGAAGC 59.239 38.462 0.00 0.00 30.85 3.86
110 112 5.663106 AGGGAGTGCATAGTCTAATCAGAAA 59.337 40.000 0.00 0.00 30.85 2.52
114 116 3.898123 GGAGGGAGTGCATAGTCTAATCA 59.102 47.826 0.00 0.00 0.00 2.57
116 118 4.206244 AGGAGGGAGTGCATAGTCTAAT 57.794 45.455 0.00 0.00 0.00 1.73
123 125 8.860517 ATAATATGATAAGGAGGGAGTGCATA 57.139 34.615 0.00 0.00 0.00 3.14
480 495 4.096532 TCTGCGGTTCACATGTGTTAAAAA 59.903 37.500 24.63 9.16 0.00 1.94
481 496 3.628032 TCTGCGGTTCACATGTGTTAAAA 59.372 39.130 24.63 9.54 0.00 1.52
490 1892 3.411446 TCAGAAAATCTGCGGTTCACAT 58.589 40.909 2.48 0.00 43.95 3.21
504 1906 1.821216 GCTCCCGTTGGATCAGAAAA 58.179 50.000 0.00 0.00 40.80 2.29
541 1943 2.057137 AGCCAGCTCTAGAGACTGAG 57.943 55.000 29.99 23.46 35.83 3.35
586 1988 4.180946 CTCGACTGACTCGCCCGG 62.181 72.222 0.00 0.00 42.62 5.73
746 2148 1.336755 CTTGCCGCAACAGTTTACCTT 59.663 47.619 0.38 0.00 0.00 3.50
747 2149 0.951558 CTTGCCGCAACAGTTTACCT 59.048 50.000 0.38 0.00 0.00 3.08
748 2150 0.663269 GCTTGCCGCAACAGTTTACC 60.663 55.000 0.38 0.00 38.92 2.85
749 2151 2.796227 GCTTGCCGCAACAGTTTAC 58.204 52.632 0.38 0.00 38.92 2.01
917 2319 3.531934 AATGGCCTTTTATCTGCTTGC 57.468 42.857 3.32 0.00 0.00 4.01
918 2320 7.864379 CACTTATAATGGCCTTTTATCTGCTTG 59.136 37.037 9.46 1.91 0.00 4.01
919 2321 7.014615 CCACTTATAATGGCCTTTTATCTGCTT 59.985 37.037 9.46 0.00 0.00 3.91
920 2322 6.491403 CCACTTATAATGGCCTTTTATCTGCT 59.509 38.462 9.46 0.00 0.00 4.24
921 2323 6.265422 ACCACTTATAATGGCCTTTTATCTGC 59.735 38.462 9.46 0.00 41.31 4.26
922 2324 7.255590 CCACCACTTATAATGGCCTTTTATCTG 60.256 40.741 9.46 8.71 41.31 2.90
923 2325 6.777580 CCACCACTTATAATGGCCTTTTATCT 59.222 38.462 9.46 0.00 41.31 1.98
924 2326 6.981722 CCACCACTTATAATGGCCTTTTATC 58.018 40.000 9.46 0.00 41.31 1.75
925 2327 6.976934 CCACCACTTATAATGGCCTTTTAT 57.023 37.500 9.46 12.07 41.31 1.40
959 2361 1.381928 TACTACCTTCCCTGCTCGCG 61.382 60.000 0.00 0.00 0.00 5.87
960 2362 0.102663 GTACTACCTTCCCTGCTCGC 59.897 60.000 0.00 0.00 0.00 5.03
961 2363 0.381089 CGTACTACCTTCCCTGCTCG 59.619 60.000 0.00 0.00 0.00 5.03
962 2364 0.102663 GCGTACTACCTTCCCTGCTC 59.897 60.000 0.00 0.00 0.00 4.26
1025 2427 4.554036 GGGGCACGATCTCCAGGC 62.554 72.222 0.00 0.00 0.00 4.85
1137 2539 1.110518 TGCCATGCATGCATACCTGG 61.111 55.000 31.73 28.95 34.91 4.45
1172 2574 0.577269 GGATAACAACGCGCTAGCAG 59.423 55.000 16.45 10.59 45.49 4.24
1183 2589 6.413783 TGAACACAGACACTAGGATAACAA 57.586 37.500 0.00 0.00 0.00 2.83
1200 2610 3.195698 GGCCGAGGCGATGAACAC 61.196 66.667 8.14 0.00 43.06 3.32
1267 2677 2.436824 GGAGGAAGAAGCCACGGC 60.437 66.667 0.00 0.00 42.33 5.68
1268 2678 1.219393 GAGGAGGAAGAAGCCACGG 59.781 63.158 0.00 0.00 0.00 4.94
1392 2872 3.737774 GTGGGTTCAGTTACGTTCTACAC 59.262 47.826 0.00 0.00 0.00 2.90
1398 2878 1.807377 CGTGGTGGGTTCAGTTACGTT 60.807 52.381 0.00 0.00 0.00 3.99
1415 3029 1.080093 ATCGGTGGCACTGTACGTG 60.080 57.895 24.83 11.80 46.58 4.49
1443 3057 8.302515 ACTTTATAAGGTCTTCGTGGATAAGA 57.697 34.615 0.00 0.00 0.00 2.10
1444 3058 9.680315 CTACTTTATAAGGTCTTCGTGGATAAG 57.320 37.037 3.13 0.00 0.00 1.73
1445 3059 9.193806 ACTACTTTATAAGGTCTTCGTGGATAA 57.806 33.333 3.13 0.00 0.00 1.75
1448 3062 7.611467 TGTACTACTTTATAAGGTCTTCGTGGA 59.389 37.037 3.13 0.00 0.00 4.02
1476 3090 8.617809 GCCAAGATGACGGATTTAAACTTATTA 58.382 33.333 0.00 0.00 0.00 0.98
1477 3091 7.122055 TGCCAAGATGACGGATTTAAACTTATT 59.878 33.333 0.00 0.00 0.00 1.40
1478 3092 6.601613 TGCCAAGATGACGGATTTAAACTTAT 59.398 34.615 0.00 0.00 0.00 1.73
1479 3093 5.941058 TGCCAAGATGACGGATTTAAACTTA 59.059 36.000 0.00 0.00 0.00 2.24
1480 3094 4.764823 TGCCAAGATGACGGATTTAAACTT 59.235 37.500 0.00 0.00 0.00 2.66
1481 3095 4.331968 TGCCAAGATGACGGATTTAAACT 58.668 39.130 0.00 0.00 0.00 2.66
1482 3096 4.695217 TGCCAAGATGACGGATTTAAAC 57.305 40.909 0.00 0.00 0.00 2.01
1483 3097 4.520874 TGTTGCCAAGATGACGGATTTAAA 59.479 37.500 0.00 0.00 0.00 1.52
1484 3098 4.075682 TGTTGCCAAGATGACGGATTTAA 58.924 39.130 0.00 0.00 0.00 1.52
1485 3099 3.680490 TGTTGCCAAGATGACGGATTTA 58.320 40.909 0.00 0.00 0.00 1.40
1486 3100 2.513753 TGTTGCCAAGATGACGGATTT 58.486 42.857 0.00 0.00 0.00 2.17
1487 3101 2.198827 TGTTGCCAAGATGACGGATT 57.801 45.000 0.00 0.00 0.00 3.01
1488 3102 2.092753 AGATGTTGCCAAGATGACGGAT 60.093 45.455 0.00 0.00 0.00 4.18
1489 3103 1.278985 AGATGTTGCCAAGATGACGGA 59.721 47.619 0.00 0.00 0.00 4.69
1490 3104 1.667724 GAGATGTTGCCAAGATGACGG 59.332 52.381 0.00 0.00 0.00 4.79
1491 3105 2.606725 GAGAGATGTTGCCAAGATGACG 59.393 50.000 0.00 0.00 0.00 4.35
1492 3106 2.606725 CGAGAGATGTTGCCAAGATGAC 59.393 50.000 0.00 0.00 0.00 3.06
1493 3107 2.897436 CGAGAGATGTTGCCAAGATGA 58.103 47.619 0.00 0.00 0.00 2.92
1494 3108 1.329906 GCGAGAGATGTTGCCAAGATG 59.670 52.381 0.00 0.00 0.00 2.90
1495 3109 1.209019 AGCGAGAGATGTTGCCAAGAT 59.791 47.619 0.00 0.00 0.00 2.40
1496 3110 0.610174 AGCGAGAGATGTTGCCAAGA 59.390 50.000 0.00 0.00 0.00 3.02
1497 3111 1.929836 GTAGCGAGAGATGTTGCCAAG 59.070 52.381 0.00 0.00 0.00 3.61
1498 3112 1.550524 AGTAGCGAGAGATGTTGCCAA 59.449 47.619 0.00 0.00 0.00 4.52
1499 3113 1.135139 GAGTAGCGAGAGATGTTGCCA 59.865 52.381 0.00 0.00 0.00 4.92
1500 3114 1.407258 AGAGTAGCGAGAGATGTTGCC 59.593 52.381 0.00 0.00 0.00 4.52
1501 3115 2.861462 AGAGTAGCGAGAGATGTTGC 57.139 50.000 0.00 0.00 0.00 4.17
1502 3116 5.009110 TGGATAAGAGTAGCGAGAGATGTTG 59.991 44.000 0.00 0.00 0.00 3.33
1503 3117 5.009210 GTGGATAAGAGTAGCGAGAGATGTT 59.991 44.000 0.00 0.00 0.00 2.71
1504 3118 4.517453 GTGGATAAGAGTAGCGAGAGATGT 59.483 45.833 0.00 0.00 0.00 3.06
1505 3119 4.759693 AGTGGATAAGAGTAGCGAGAGATG 59.240 45.833 0.00 0.00 0.00 2.90
1506 3120 4.980573 AGTGGATAAGAGTAGCGAGAGAT 58.019 43.478 0.00 0.00 0.00 2.75
1507 3121 4.425180 AGTGGATAAGAGTAGCGAGAGA 57.575 45.455 0.00 0.00 0.00 3.10
1508 3122 4.576873 TCAAGTGGATAAGAGTAGCGAGAG 59.423 45.833 0.00 0.00 0.00 3.20
1509 3123 4.524053 TCAAGTGGATAAGAGTAGCGAGA 58.476 43.478 0.00 0.00 0.00 4.04
1510 3124 4.902443 TCAAGTGGATAAGAGTAGCGAG 57.098 45.455 0.00 0.00 0.00 5.03
1511 3125 6.954487 TTATCAAGTGGATAAGAGTAGCGA 57.046 37.500 0.00 0.00 42.22 4.93
1512 3126 6.642950 CCTTTATCAAGTGGATAAGAGTAGCG 59.357 42.308 0.27 0.00 46.34 4.26
1513 3127 6.931840 CCCTTTATCAAGTGGATAAGAGTAGC 59.068 42.308 0.27 0.00 46.34 3.58
1514 3128 7.071321 ACCCCTTTATCAAGTGGATAAGAGTAG 59.929 40.741 0.27 0.00 46.34 2.57
1515 3129 6.906901 ACCCCTTTATCAAGTGGATAAGAGTA 59.093 38.462 0.27 0.00 46.34 2.59
1516 3130 5.731678 ACCCCTTTATCAAGTGGATAAGAGT 59.268 40.000 0.27 0.00 46.34 3.24
1517 3131 6.058183 CACCCCTTTATCAAGTGGATAAGAG 58.942 44.000 0.27 2.50 46.34 2.85
1518 3132 5.631481 GCACCCCTTTATCAAGTGGATAAGA 60.631 44.000 0.27 0.00 46.34 2.10
1519 3133 4.580580 GCACCCCTTTATCAAGTGGATAAG 59.419 45.833 0.27 0.00 46.34 1.73
1520 3134 4.017958 TGCACCCCTTTATCAAGTGGATAA 60.018 41.667 0.00 0.00 44.69 1.75
1521 3135 3.525609 TGCACCCCTTTATCAAGTGGATA 59.474 43.478 0.00 0.00 37.44 2.59
1522 3136 2.311542 TGCACCCCTTTATCAAGTGGAT 59.688 45.455 0.00 0.00 40.14 3.41
1523 3137 1.707989 TGCACCCCTTTATCAAGTGGA 59.292 47.619 0.00 0.00 32.05 4.02
1524 3138 2.094675 CTGCACCCCTTTATCAAGTGG 58.905 52.381 0.00 0.00 33.82 4.00
1525 3139 3.071874 TCTGCACCCCTTTATCAAGTG 57.928 47.619 0.00 0.00 0.00 3.16
1526 3140 3.806949 TTCTGCACCCCTTTATCAAGT 57.193 42.857 0.00 0.00 0.00 3.16
1527 3141 5.002464 CATTTCTGCACCCCTTTATCAAG 57.998 43.478 0.00 0.00 0.00 3.02
1542 3156 3.188048 GGATATTCGGCTCAGCATTTCTG 59.812 47.826 0.00 0.00 44.21 3.02
1543 3157 3.181451 TGGATATTCGGCTCAGCATTTCT 60.181 43.478 0.00 0.00 0.00 2.52
1544 3158 3.141398 TGGATATTCGGCTCAGCATTTC 58.859 45.455 0.00 0.00 0.00 2.17
1545 3159 3.213206 TGGATATTCGGCTCAGCATTT 57.787 42.857 0.00 0.00 0.00 2.32
1546 3160 2.936919 TGGATATTCGGCTCAGCATT 57.063 45.000 0.00 0.00 0.00 3.56
1547 3161 2.880890 GTTTGGATATTCGGCTCAGCAT 59.119 45.455 0.00 0.00 0.00 3.79
1548 3162 2.288666 GTTTGGATATTCGGCTCAGCA 58.711 47.619 0.00 0.00 0.00 4.41
1549 3163 1.604278 GGTTTGGATATTCGGCTCAGC 59.396 52.381 0.00 0.00 0.00 4.26
1550 3164 3.199880 AGGTTTGGATATTCGGCTCAG 57.800 47.619 0.00 0.00 0.00 3.35
1551 3165 3.644966 AAGGTTTGGATATTCGGCTCA 57.355 42.857 0.00 0.00 0.00 4.26
1552 3166 3.945285 TGAAAGGTTTGGATATTCGGCTC 59.055 43.478 0.00 0.00 0.00 4.70
1553 3167 3.694566 GTGAAAGGTTTGGATATTCGGCT 59.305 43.478 0.00 0.00 0.00 5.52
1554 3168 3.181490 GGTGAAAGGTTTGGATATTCGGC 60.181 47.826 0.00 0.00 0.00 5.54
1555 3169 4.270008 AGGTGAAAGGTTTGGATATTCGG 58.730 43.478 0.00 0.00 0.00 4.30
1556 3170 6.458342 GCTTAGGTGAAAGGTTTGGATATTCG 60.458 42.308 0.00 0.00 0.00 3.34
1557 3171 6.183360 GGCTTAGGTGAAAGGTTTGGATATTC 60.183 42.308 0.00 0.00 0.00 1.75
1558 3172 5.656859 GGCTTAGGTGAAAGGTTTGGATATT 59.343 40.000 0.00 0.00 0.00 1.28
1559 3173 5.044105 AGGCTTAGGTGAAAGGTTTGGATAT 60.044 40.000 0.00 0.00 0.00 1.63
1560 3174 4.291249 AGGCTTAGGTGAAAGGTTTGGATA 59.709 41.667 0.00 0.00 0.00 2.59
1561 3175 3.076032 AGGCTTAGGTGAAAGGTTTGGAT 59.924 43.478 0.00 0.00 0.00 3.41
1562 3176 2.445525 AGGCTTAGGTGAAAGGTTTGGA 59.554 45.455 0.00 0.00 0.00 3.53
1563 3177 2.876581 AGGCTTAGGTGAAAGGTTTGG 58.123 47.619 0.00 0.00 0.00 3.28
1564 3178 4.825085 TGTTAGGCTTAGGTGAAAGGTTTG 59.175 41.667 0.00 0.00 0.00 2.93
1565 3179 5.056553 TGTTAGGCTTAGGTGAAAGGTTT 57.943 39.130 0.00 0.00 0.00 3.27
1566 3180 4.717279 TGTTAGGCTTAGGTGAAAGGTT 57.283 40.909 0.00 0.00 0.00 3.50
1567 3181 4.288626 TGATGTTAGGCTTAGGTGAAAGGT 59.711 41.667 0.00 0.00 0.00 3.50
1568 3182 4.843728 TGATGTTAGGCTTAGGTGAAAGG 58.156 43.478 0.00 0.00 0.00 3.11
1569 3183 6.817765 TTTGATGTTAGGCTTAGGTGAAAG 57.182 37.500 0.00 0.00 0.00 2.62
1570 3184 6.294508 GCTTTTGATGTTAGGCTTAGGTGAAA 60.295 38.462 0.00 0.00 0.00 2.69
1571 3185 5.183140 GCTTTTGATGTTAGGCTTAGGTGAA 59.817 40.000 0.00 0.00 0.00 3.18
1572 3186 4.700213 GCTTTTGATGTTAGGCTTAGGTGA 59.300 41.667 0.00 0.00 0.00 4.02
1573 3187 4.142381 GGCTTTTGATGTTAGGCTTAGGTG 60.142 45.833 0.00 0.00 0.00 4.00
1574 3188 4.017126 GGCTTTTGATGTTAGGCTTAGGT 58.983 43.478 0.00 0.00 0.00 3.08
1575 3189 3.065371 CGGCTTTTGATGTTAGGCTTAGG 59.935 47.826 0.00 0.00 32.77 2.69
1576 3190 3.938963 TCGGCTTTTGATGTTAGGCTTAG 59.061 43.478 0.00 0.00 32.77 2.18
1577 3191 3.945346 TCGGCTTTTGATGTTAGGCTTA 58.055 40.909 0.00 0.00 32.77 3.09
1578 3192 2.790433 TCGGCTTTTGATGTTAGGCTT 58.210 42.857 0.00 0.00 32.77 4.35
1579 3193 2.489938 TCGGCTTTTGATGTTAGGCT 57.510 45.000 0.00 0.00 32.77 4.58
1580 3194 2.159379 CCTTCGGCTTTTGATGTTAGGC 60.159 50.000 0.00 0.00 0.00 3.93
1581 3195 2.159379 GCCTTCGGCTTTTGATGTTAGG 60.159 50.000 0.00 0.00 46.69 2.69
1582 3196 3.136808 GCCTTCGGCTTTTGATGTTAG 57.863 47.619 0.00 0.00 46.69 2.34
1650 3264 3.434319 CCATGCTGGGTCACACGC 61.434 66.667 0.00 0.00 32.67 5.34
1660 3274 1.079197 TCTACGTGCCACCATGCTG 60.079 57.895 0.00 0.00 0.00 4.41
1677 3291 3.547613 CGTAGGAACGTGCTACCTATGTC 60.548 52.174 15.91 5.56 44.21 3.06
1751 3365 2.525055 CAAGTGGTGGAAAACAACGTG 58.475 47.619 0.00 0.00 40.67 4.49
1851 3486 5.950883 TCGACATATTAATTCTCCTAGCGG 58.049 41.667 0.00 0.00 0.00 5.52
1852 3487 6.693545 GGATCGACATATTAATTCTCCTAGCG 59.306 42.308 0.00 0.00 0.00 4.26
1854 3489 9.579768 CTTGGATCGACATATTAATTCTCCTAG 57.420 37.037 0.00 0.00 0.00 3.02
1858 3505 7.872993 TGGACTTGGATCGACATATTAATTCTC 59.127 37.037 0.00 0.00 0.00 2.87
1894 3541 9.209048 ACACAGGATAGGAACATTTACAGTATA 57.791 33.333 0.00 0.00 0.00 1.47
1895 3542 8.090788 ACACAGGATAGGAACATTTACAGTAT 57.909 34.615 0.00 0.00 0.00 2.12
1919 3566 2.046507 CTCCACCCAGCAGCAGAC 60.047 66.667 0.00 0.00 0.00 3.51
1943 3590 2.097728 TCACACGCTCGATCGTCG 59.902 61.111 23.16 23.16 41.21 5.12
1944 3591 1.868251 GGTCACACGCTCGATCGTC 60.868 63.158 11.95 7.49 41.21 4.20
1945 3592 2.178521 GGTCACACGCTCGATCGT 59.821 61.111 15.94 8.75 44.35 3.73
1946 3593 2.944557 CGGTCACACGCTCGATCG 60.945 66.667 9.36 9.36 0.00 3.69
1947 3594 1.583967 CTCGGTCACACGCTCGATC 60.584 63.158 0.00 0.00 0.00 3.69
1948 3595 2.485582 CTCGGTCACACGCTCGAT 59.514 61.111 0.00 0.00 0.00 3.59
1949 3596 4.400109 GCTCGGTCACACGCTCGA 62.400 66.667 0.00 0.00 0.00 4.04
1976 3623 2.504681 CCACGTACGTACCACCGC 60.505 66.667 22.34 0.00 0.00 5.68
1988 3635 2.297597 GCTATATGCTTCCTCTCCACGT 59.702 50.000 0.00 0.00 38.95 4.49
1989 3636 2.669670 CGCTATATGCTTCCTCTCCACG 60.670 54.545 0.00 0.00 40.11 4.94
1990 3637 2.928731 GCGCTATATGCTTCCTCTCCAC 60.929 54.545 0.00 0.00 40.11 4.02
1991 3638 1.273606 GCGCTATATGCTTCCTCTCCA 59.726 52.381 0.00 0.00 40.11 3.86
2110 3758 9.086336 ACATAAAGAACAAACAACAACTTGATG 57.914 29.630 0.00 0.00 34.36 3.07
2177 3829 4.018490 TGGATCCCACATGTCAATTCTTG 58.982 43.478 9.90 0.00 0.00 3.02
2249 3901 1.966451 CCAACTTGACACCCCGAGC 60.966 63.158 0.00 0.00 0.00 5.03
2255 3907 4.157105 ACAGTAAAACACCAACTTGACACC 59.843 41.667 0.00 0.00 0.00 4.16
2256 3908 5.305139 ACAGTAAAACACCAACTTGACAC 57.695 39.130 0.00 0.00 0.00 3.67
2312 4121 4.775236 AGCTTGGACTTGGATCAAGATAC 58.225 43.478 13.74 4.88 43.42 2.24
2316 4125 3.822735 TGAAAGCTTGGACTTGGATCAAG 59.177 43.478 0.00 6.15 45.85 3.02
2350 4159 1.291877 CTGTTGGTGCGCAGGAGTAC 61.292 60.000 12.22 5.69 0.00 2.73
2471 4280 4.071875 TTGTGCCCGACGCCGTAT 62.072 61.111 0.00 0.00 36.24 3.06
2619 4428 5.837438 TCTCAGATGACACATGGATCTGTAT 59.163 40.000 18.25 2.88 42.48 2.29
2620 4429 5.068329 GTCTCAGATGACACATGGATCTGTA 59.932 44.000 18.25 10.38 42.48 2.74
2621 4430 4.028825 TCTCAGATGACACATGGATCTGT 58.971 43.478 18.25 6.35 42.48 3.41
2622 4431 4.370049 GTCTCAGATGACACATGGATCTG 58.630 47.826 15.11 15.11 43.01 2.90
2623 4432 3.387374 GGTCTCAGATGACACATGGATCT 59.613 47.826 0.00 0.00 38.61 2.75
2624 4433 3.133542 TGGTCTCAGATGACACATGGATC 59.866 47.826 0.00 0.00 38.61 3.36
2625 4434 3.109928 TGGTCTCAGATGACACATGGAT 58.890 45.455 0.00 0.00 38.61 3.41
2628 4437 4.133013 TGATGGTCTCAGATGACACATG 57.867 45.455 0.00 0.00 38.61 3.21
2629 4438 6.683312 ATATGATGGTCTCAGATGACACAT 57.317 37.500 0.00 0.00 34.53 3.21
2630 4439 7.452501 TGATATATGATGGTCTCAGATGACACA 59.547 37.037 0.00 0.00 36.50 3.72
2631 4440 7.834803 TGATATATGATGGTCTCAGATGACAC 58.165 38.462 0.00 0.00 36.50 3.67
2633 4442 8.065473 ACTGATATATGATGGTCTCAGATGAC 57.935 38.462 4.52 0.00 36.50 3.06
2649 4477 7.563188 AGGTGTTCAGACTTCAGACTGATATAT 59.437 37.037 5.87 0.00 43.85 0.86
2650 4478 6.892456 AGGTGTTCAGACTTCAGACTGATATA 59.108 38.462 5.87 0.00 43.85 0.86
2664 4492 0.721718 GCATGCGTAGGTGTTCAGAC 59.278 55.000 0.00 0.00 0.00 3.51
2985 5252 0.466922 GGCCCCTGTCATTCTGATGG 60.467 60.000 0.00 0.00 33.93 3.51
2997 5264 9.408648 CATATAATTAAGGTTATTAGGCCCCTG 57.591 37.037 0.00 0.00 0.00 4.45
3125 5397 5.005740 TGTTAGTACACATCTCGGTACTGT 58.994 41.667 13.15 0.00 46.99 3.55
3146 5418 2.550830 AAAGTGGAGAGAATGCGTGT 57.449 45.000 0.00 0.00 0.00 4.49
3197 5471 4.651778 TGACTTCCCAGGTTTAACTGATG 58.348 43.478 0.00 0.00 40.97 3.07
3199 5473 4.781775 TTGACTTCCCAGGTTTAACTGA 57.218 40.909 0.00 0.00 40.97 3.41
3200 5474 5.278957 CCATTTGACTTCCCAGGTTTAACTG 60.279 44.000 0.00 0.00 38.21 3.16
3339 5697 4.868450 TGGTTTAAACTGAACTGTCGTG 57.132 40.909 17.50 0.00 0.00 4.35
3371 5729 2.293399 GCCAGTTGAAACGGTCAGAAAT 59.707 45.455 0.00 0.00 37.61 2.17
3483 5841 6.173339 GTCAAACTTGATCCTGATCTGGTAA 58.827 40.000 17.33 10.71 39.73 2.85
3517 5882 3.435186 GCTGGCGCTCAAAGTCCC 61.435 66.667 7.64 0.00 0.00 4.46
3518 5883 3.435186 GGCTGGCGCTCAAAGTCC 61.435 66.667 7.64 2.98 36.09 3.85
3519 5884 2.359230 AGGCTGGCGCTCAAAGTC 60.359 61.111 7.64 1.58 36.09 3.01
3520 5885 2.670934 CAGGCTGGCGCTCAAAGT 60.671 61.111 7.64 0.00 36.09 2.66
3521 5886 2.263741 AACAGGCTGGCGCTCAAAG 61.264 57.895 20.34 1.15 36.09 2.77
3522 5887 2.203337 AACAGGCTGGCGCTCAAA 60.203 55.556 20.34 0.00 36.09 2.69
3523 5888 2.979676 CAACAGGCTGGCGCTCAA 60.980 61.111 20.34 0.00 36.09 3.02
3598 5963 1.145803 CGGTCAAGGTCGTTTCCTTC 58.854 55.000 6.39 0.00 44.87 3.46
3601 5966 0.033090 AGTCGGTCAAGGTCGTTTCC 59.967 55.000 0.00 0.00 0.00 3.13
3610 5976 3.380479 TGTAGGTGAAAGTCGGTCAAG 57.620 47.619 0.00 0.00 0.00 3.02
3799 7248 1.112916 TGAGGAGAAGCCACACGACA 61.113 55.000 0.00 0.00 40.02 4.35
3874 7323 3.435671 CGAAGATGTACTTGGGGTTGAAC 59.564 47.826 0.00 0.00 39.13 3.18
4042 7491 2.122783 TTGCCAATAGTACAGCACCC 57.877 50.000 0.00 0.00 34.37 4.61
4113 7564 2.644798 AGTTCAGTAAATGCTCCCCAGT 59.355 45.455 0.00 0.00 0.00 4.00
4114 7565 3.356529 AGTTCAGTAAATGCTCCCCAG 57.643 47.619 0.00 0.00 0.00 4.45
4115 7566 3.073798 TCAAGTTCAGTAAATGCTCCCCA 59.926 43.478 0.00 0.00 0.00 4.96
4116 7567 3.440522 GTCAAGTTCAGTAAATGCTCCCC 59.559 47.826 0.00 0.00 0.00 4.81
4117 7568 4.072131 TGTCAAGTTCAGTAAATGCTCCC 58.928 43.478 0.00 0.00 0.00 4.30
4118 7569 4.997395 TCTGTCAAGTTCAGTAAATGCTCC 59.003 41.667 0.00 0.00 34.86 4.70
4119 7570 5.698545 ACTCTGTCAAGTTCAGTAAATGCTC 59.301 40.000 0.00 0.00 34.86 4.26
4221 7672 2.485814 GTGGCAGTCAAAGAGGATGTTC 59.514 50.000 0.00 0.00 0.00 3.18
4386 7881 2.838202 TGGTGGGAGTATCTTCAGAACC 59.162 50.000 0.00 0.00 33.73 3.62
4413 7908 4.351111 ACTCTGTCCATACCAAAAACCTCT 59.649 41.667 0.00 0.00 0.00 3.69
4437 7932 7.118723 ACAATAGCCAAAGTTCCATCTGATAA 58.881 34.615 0.00 0.00 0.00 1.75
4551 8046 4.404507 TTCACTGTCGCTATTGAAAAGC 57.595 40.909 0.00 0.00 36.60 3.51
4584 8080 6.650807 TGGCATTCTAGAAAGTTGTAGTCAAG 59.349 38.462 9.71 0.00 33.97 3.02
4712 8324 7.876068 CCATGTACAGGTCAGTAAAAGAAACTA 59.124 37.037 6.79 0.00 0.00 2.24
4721 8333 4.591498 AGTTCACCATGTACAGGTCAGTAA 59.409 41.667 12.41 4.85 37.23 2.24
4803 8416 2.958355 CTCAGCTGAAACAGGGGAAAAA 59.042 45.455 18.85 0.00 31.21 1.94
4808 8421 0.251077 AAGCTCAGCTGAAACAGGGG 60.251 55.000 18.85 5.15 39.62 4.79
4900 8513 5.845985 AAGCGTTGGATATTATCATGTCG 57.154 39.130 6.04 5.93 0.00 4.35
4908 8521 6.202188 GGATTCGAAGAAAGCGTTGGATATTA 59.798 38.462 3.35 0.00 45.90 0.98
4928 8541 6.018180 GTCGGTTACATACTTGGAATGGATTC 60.018 42.308 0.00 0.00 36.08 2.52
4930 8543 5.104693 TGTCGGTTACATACTTGGAATGGAT 60.105 40.000 0.00 0.00 31.43 3.41
4949 8562 5.831702 ACACTAGTAAGGTATCTTGTCGG 57.168 43.478 0.00 0.00 34.59 4.79
4973 8586 7.011763 CACGGCTTACAGAATAGTAGTACTGTA 59.988 40.741 13.29 4.35 42.39 2.74
4974 8587 5.884792 ACGGCTTACAGAATAGTAGTACTGT 59.115 40.000 13.29 3.10 44.17 3.55
4975 8588 6.200100 CACGGCTTACAGAATAGTAGTACTG 58.800 44.000 13.29 0.00 36.58 2.74
4976 8589 5.221009 GCACGGCTTACAGAATAGTAGTACT 60.221 44.000 8.14 8.14 0.00 2.73
4977 8590 4.974888 GCACGGCTTACAGAATAGTAGTAC 59.025 45.833 0.00 0.00 0.00 2.73
4995 8643 8.687824 AATTTTAATTAGTTTCTGATGCACGG 57.312 30.769 0.00 0.00 0.00 4.94
5013 8661 6.149142 GCCTGGAATTGCACATGAAATTTTAA 59.851 34.615 0.00 0.00 33.55 1.52
5026 8674 1.412079 ACAAAGTGCCTGGAATTGCA 58.588 45.000 0.00 0.00 34.54 4.08
5033 8681 1.662044 GCCAGAACAAAGTGCCTGG 59.338 57.895 11.97 11.97 46.67 4.45
5080 8728 1.078143 GGCTTGGCTTCCGATGACT 60.078 57.895 0.00 0.00 0.00 3.41
5119 8767 2.957680 TGTTTGCAGATGTGACATGGTT 59.042 40.909 1.23 0.00 0.00 3.67
5296 8944 5.412640 TCAATCATGTGTTGGATGCATTTC 58.587 37.500 0.00 0.00 0.00 2.17
5299 8947 4.221041 TGTTCAATCATGTGTTGGATGCAT 59.779 37.500 0.00 0.00 0.00 3.96
5330 8978 3.731867 GCATGACCCGCTATTTGAAACTG 60.732 47.826 0.00 0.00 0.00 3.16
5336 8984 0.947244 GAGGCATGACCCGCTATTTG 59.053 55.000 0.00 0.00 40.58 2.32
5367 9015 4.624015 CACACTGTTACGTTTAGAAGGGA 58.376 43.478 0.00 0.00 0.00 4.20
5369 9017 4.056050 AGCACACTGTTACGTTTAGAAGG 58.944 43.478 0.00 0.00 0.00 3.46
5381 9029 7.488322 ACACACATTTTAAATAGCACACTGTT 58.512 30.769 0.00 0.00 0.00 3.16
5403 9052 3.791973 TTGGTCCAAACACATGAACAC 57.208 42.857 0.40 0.00 0.00 3.32
5428 9077 6.461648 CGTTTAGAAGAGATCATGGGCTAAGA 60.462 42.308 0.00 0.00 0.00 2.10
5462 9111 9.023962 AGATTTCTGTCATGGTTTTAAATAGCA 57.976 29.630 0.00 0.00 0.00 3.49
5504 9153 1.406751 CGTCATGTCCATTAGGCCACA 60.407 52.381 5.01 0.00 33.74 4.17
5614 9263 1.399744 AAGCGGCGATCCACCAGATA 61.400 55.000 12.98 0.00 34.42 1.98
5632 9281 3.243602 TGGACATGAAGACGACGAAGAAA 60.244 43.478 0.00 0.00 0.00 2.52
5695 9344 2.286197 GGGAAGTAGGGGCCCTGT 60.286 66.667 35.70 19.50 38.85 4.00
5863 9512 0.321298 GCTCCGTGTAGAAAAGGCCA 60.321 55.000 5.01 0.00 0.00 5.36
5869 9518 1.890489 TGCACTAGCTCCGTGTAGAAA 59.110 47.619 15.10 0.00 42.74 2.52
5989 9638 1.372997 GAAGCGCTCCTGAACGTCA 60.373 57.895 12.06 0.00 0.00 4.35
6208 9857 1.140652 GAGGGCTTCTTCTCCCATCTG 59.859 57.143 0.00 0.00 45.07 2.90
6313 9962 3.628942 TGCTCATACCAACTTGATGCATC 59.371 43.478 20.14 20.14 0.00 3.91
6366 10015 3.880047 ATAGCTTGTAGTTGGCGTGTA 57.120 42.857 0.00 0.00 0.00 2.90
6368 10017 5.050490 AGAATATAGCTTGTAGTTGGCGTG 58.950 41.667 0.00 0.00 0.00 5.34
6371 10020 9.145865 GATAAGAGAATATAGCTTGTAGTTGGC 57.854 37.037 0.00 0.00 0.00 4.52
6395 10044 9.186837 AGATGAGAAATGCAACTAATTCTTGAT 57.813 29.630 0.00 0.00 0.00 2.57
6406 10055 9.703892 ATGTAGAGTATAGATGAGAAATGCAAC 57.296 33.333 0.00 0.00 0.00 4.17
6414 10063 9.760926 AGCCAATAATGTAGAGTATAGATGAGA 57.239 33.333 0.00 0.00 0.00 3.27
6415 10064 9.800433 CAGCCAATAATGTAGAGTATAGATGAG 57.200 37.037 0.00 0.00 0.00 2.90
6417 10066 8.753133 TCCAGCCAATAATGTAGAGTATAGATG 58.247 37.037 0.00 0.00 0.00 2.90
6418 10067 8.901472 TCCAGCCAATAATGTAGAGTATAGAT 57.099 34.615 0.00 0.00 0.00 1.98
6419 10068 8.901472 ATCCAGCCAATAATGTAGAGTATAGA 57.099 34.615 0.00 0.00 0.00 1.98
6420 10069 8.976353 AGATCCAGCCAATAATGTAGAGTATAG 58.024 37.037 0.00 0.00 0.00 1.31
6421 10070 8.753133 CAGATCCAGCCAATAATGTAGAGTATA 58.247 37.037 0.00 0.00 0.00 1.47
6422 10071 7.455953 TCAGATCCAGCCAATAATGTAGAGTAT 59.544 37.037 0.00 0.00 0.00 2.12
6423 10072 6.782494 TCAGATCCAGCCAATAATGTAGAGTA 59.218 38.462 0.00 0.00 0.00 2.59
6427 10076 7.756395 AAATCAGATCCAGCCAATAATGTAG 57.244 36.000 0.00 0.00 0.00 2.74
6429 10078 7.270047 CAAAAATCAGATCCAGCCAATAATGT 58.730 34.615 0.00 0.00 0.00 2.71
6430 10079 6.704493 CCAAAAATCAGATCCAGCCAATAATG 59.296 38.462 0.00 0.00 0.00 1.90
6431 10080 6.384886 ACCAAAAATCAGATCCAGCCAATAAT 59.615 34.615 0.00 0.00 0.00 1.28
6432 10081 5.721000 ACCAAAAATCAGATCCAGCCAATAA 59.279 36.000 0.00 0.00 0.00 1.40
6433 10082 5.271598 ACCAAAAATCAGATCCAGCCAATA 58.728 37.500 0.00 0.00 0.00 1.90
6434 10083 4.098894 ACCAAAAATCAGATCCAGCCAAT 58.901 39.130 0.00 0.00 0.00 3.16
6451 10150 6.601613 AGTTCAATGTGAGAACAAGTACCAAA 59.398 34.615 8.54 0.00 45.93 3.28
6454 10153 7.116519 GTCTAGTTCAATGTGAGAACAAGTACC 59.883 40.741 8.54 0.00 45.93 3.34
6455 10154 7.148950 CGTCTAGTTCAATGTGAGAACAAGTAC 60.149 40.741 8.54 0.00 45.93 2.73
6460 10159 4.556233 CCGTCTAGTTCAATGTGAGAACA 58.444 43.478 8.54 0.00 45.93 3.18
6461 10160 3.368236 GCCGTCTAGTTCAATGTGAGAAC 59.632 47.826 0.00 0.00 44.32 3.01
6464 10163 2.271800 GGCCGTCTAGTTCAATGTGAG 58.728 52.381 0.00 0.00 0.00 3.51
6466 10165 2.093306 TGGCCGTCTAGTTCAATGTG 57.907 50.000 0.00 0.00 0.00 3.21
6467 10166 2.301870 TCTTGGCCGTCTAGTTCAATGT 59.698 45.455 0.00 0.00 0.00 2.71
6468 10167 2.972625 TCTTGGCCGTCTAGTTCAATG 58.027 47.619 0.00 0.00 0.00 2.82
6469 10168 3.197766 TCATCTTGGCCGTCTAGTTCAAT 59.802 43.478 0.00 0.00 0.00 2.57
6470 10169 2.565391 TCATCTTGGCCGTCTAGTTCAA 59.435 45.455 0.00 0.00 0.00 2.69
6598 10299 3.583086 TCTTCTTAAGGAGGTTGGAGTGG 59.417 47.826 11.02 0.00 0.00 4.00
6664 10365 3.140144 TGGACAACATCTTCTCCCCTTTT 59.860 43.478 0.00 0.00 0.00 2.27
6703 10404 6.806668 TCATATGTGATACCAACCTTGAGA 57.193 37.500 1.90 0.00 0.00 3.27
6853 10554 0.458669 CATTCATTCTGCTGCCCCAC 59.541 55.000 0.00 0.00 0.00 4.61
6877 10578 6.695713 GCAGACATACGTTCTTGTACATATGA 59.304 38.462 10.38 4.74 30.85 2.15
6886 10587 1.920574 CTCCGCAGACATACGTTCTTG 59.079 52.381 0.00 0.00 0.00 3.02
6892 10593 0.317938 GCCTACTCCGCAGACATACG 60.318 60.000 0.00 0.00 0.00 3.06
6893 10594 0.744874 TGCCTACTCCGCAGACATAC 59.255 55.000 0.00 0.00 0.00 2.39
6904 10605 7.386299 CCAACATGACTAATAAGATGCCTACTC 59.614 40.741 0.00 0.00 0.00 2.59
6905 10606 7.220030 CCAACATGACTAATAAGATGCCTACT 58.780 38.462 0.00 0.00 0.00 2.57
6910 10621 7.173907 ACATAGCCAACATGACTAATAAGATGC 59.826 37.037 0.00 0.00 0.00 3.91
6937 10648 3.771216 ACATGACAAGAGGAGGCAAAAT 58.229 40.909 0.00 0.00 0.00 1.82
6953 10664 4.081697 ACAACGGACATCAGACATACATGA 60.082 41.667 0.00 0.00 0.00 3.07
6955 10666 4.183865 CACAACGGACATCAGACATACAT 58.816 43.478 0.00 0.00 0.00 2.29
6962 10673 0.105778 TGCACACAACGGACATCAGA 59.894 50.000 0.00 0.00 0.00 3.27
6963 10674 1.159285 ATGCACACAACGGACATCAG 58.841 50.000 0.00 0.00 0.00 2.90
6964 10675 1.535028 GAATGCACACAACGGACATCA 59.465 47.619 0.00 0.00 0.00 3.07
6971 10682 3.994789 CATACTCAGAATGCACACAACG 58.005 45.455 0.00 0.00 34.76 4.10
6983 10694 1.908619 TCCAGCCTTTGCATACTCAGA 59.091 47.619 0.00 0.00 41.13 3.27
6986 10697 2.357009 CACATCCAGCCTTTGCATACTC 59.643 50.000 0.00 0.00 41.13 2.59
6988 10699 2.368439 TCACATCCAGCCTTTGCATAC 58.632 47.619 0.00 0.00 41.13 2.39
6992 10703 1.200948 GAGTTCACATCCAGCCTTTGC 59.799 52.381 0.00 0.00 37.95 3.68
6993 10704 2.507484 TGAGTTCACATCCAGCCTTTG 58.493 47.619 0.00 0.00 0.00 2.77
6994 10705 2.957402 TGAGTTCACATCCAGCCTTT 57.043 45.000 0.00 0.00 0.00 3.11
6995 10706 3.087031 CAATGAGTTCACATCCAGCCTT 58.913 45.455 0.00 0.00 0.00 4.35
6998 10709 2.415090 GCACAATGAGTTCACATCCAGC 60.415 50.000 0.00 0.00 0.00 4.85
7000 10711 3.144657 AGCACAATGAGTTCACATCCA 57.855 42.857 0.00 0.00 0.00 3.41
7003 10714 5.124457 GGATACAAGCACAATGAGTTCACAT 59.876 40.000 0.00 0.00 0.00 3.21
7013 10724 3.737559 TCAAGGGGATACAAGCACAAT 57.262 42.857 0.00 0.00 39.74 2.71
7016 10727 2.684881 CACATCAAGGGGATACAAGCAC 59.315 50.000 0.00 0.00 33.95 4.40
7022 10733 7.233757 ACTTATAGAGTCACATCAAGGGGATAC 59.766 40.741 0.00 0.00 31.20 2.24
7036 10747 8.215736 GGGCCCTTTTATTAACTTATAGAGTCA 58.784 37.037 17.04 0.00 37.72 3.41
7049 10760 9.771140 TTCATTTAGTAAAGGGCCCTTTTATTA 57.229 29.630 46.15 32.36 42.93 0.98
7057 10768 4.095932 CGTCTTTCATTTAGTAAAGGGCCC 59.904 45.833 16.46 16.46 34.22 5.80
7058 10769 4.698780 ACGTCTTTCATTTAGTAAAGGGCC 59.301 41.667 7.39 0.00 34.22 5.80
7059 10770 5.874895 ACGTCTTTCATTTAGTAAAGGGC 57.125 39.130 7.39 0.00 34.22 5.19
7068 10779 8.038944 GCCCCATAGATATACGTCTTTCATTTA 58.961 37.037 0.00 0.00 0.00 1.40
7072 10783 5.084519 AGCCCCATAGATATACGTCTTTCA 58.915 41.667 0.00 0.00 0.00 2.69
7077 10788 5.191426 TGTCTAGCCCCATAGATATACGTC 58.809 45.833 0.00 0.00 34.41 4.34
7079 10790 5.437946 TCTGTCTAGCCCCATAGATATACG 58.562 45.833 0.00 0.00 34.41 3.06
7091 10802 1.687563 GAGGACTCTCTGTCTAGCCC 58.312 60.000 0.00 0.00 44.74 5.19
7101 10812 5.923684 CGCAATTCCTTATTAGAGGACTCTC 59.076 44.000 4.90 0.00 45.30 3.20
7106 10817 5.128827 ACTGACGCAATTCCTTATTAGAGGA 59.871 40.000 0.00 0.00 43.99 3.71
7108 10819 6.910536 AACTGACGCAATTCCTTATTAGAG 57.089 37.500 0.00 0.00 0.00 2.43
7113 10824 5.957842 TGAAAACTGACGCAATTCCTTAT 57.042 34.783 0.00 0.00 0.00 1.73
7118 10829 8.575454 GTGTAATAATGAAAACTGACGCAATTC 58.425 33.333 0.00 0.00 0.00 2.17
7121 10832 6.853872 GTGTGTAATAATGAAAACTGACGCAA 59.146 34.615 0.00 0.00 0.00 4.85
7124 10835 9.689075 CATAGTGTGTAATAATGAAAACTGACG 57.311 33.333 0.00 0.00 0.00 4.35
7175 10886 8.548025 TCCTATTGAACATCTCATTTAGGTTGA 58.452 33.333 9.40 0.00 39.33 3.18
7189 10926 3.205056 TCCAAGGGCATCCTATTGAACAT 59.795 43.478 0.00 0.00 44.07 2.71
7197 10934 2.711009 CCTAACATCCAAGGGCATCCTA 59.289 50.000 0.00 0.00 44.07 2.94
7231 10968 7.453393 TCCCATTCTACTTAGCCATTATCTTG 58.547 38.462 0.00 0.00 0.00 3.02
7242 10979 8.462016 CACCAATTTTCTTCCCATTCTACTTAG 58.538 37.037 0.00 0.00 0.00 2.18
7244 10981 6.211384 CCACCAATTTTCTTCCCATTCTACTT 59.789 38.462 0.00 0.00 0.00 2.24
7245 10982 5.716703 CCACCAATTTTCTTCCCATTCTACT 59.283 40.000 0.00 0.00 0.00 2.57
7246 10983 5.714806 TCCACCAATTTTCTTCCCATTCTAC 59.285 40.000 0.00 0.00 0.00 2.59
7248 10985 4.750941 TCCACCAATTTTCTTCCCATTCT 58.249 39.130 0.00 0.00 0.00 2.40
7249 10986 4.772100 TCTCCACCAATTTTCTTCCCATTC 59.228 41.667 0.00 0.00 0.00 2.67
7266 11030 4.133078 CTCCCATCTAGCATTTTCTCCAC 58.867 47.826 0.00 0.00 0.00 4.02
7292 11056 5.605534 TGATTTCTCTATGTAAGCAGAGGC 58.394 41.667 0.00 0.00 39.05 4.70
7293 11057 9.202273 GTTATGATTTCTCTATGTAAGCAGAGG 57.798 37.037 0.00 0.00 39.05 3.69
7294 11058 9.755804 TGTTATGATTTCTCTATGTAAGCAGAG 57.244 33.333 0.00 0.00 39.77 3.35
7295 11059 9.755804 CTGTTATGATTTCTCTATGTAAGCAGA 57.244 33.333 0.00 0.00 0.00 4.26
7296 11060 8.986847 CCTGTTATGATTTCTCTATGTAAGCAG 58.013 37.037 0.00 0.00 0.00 4.24
7297 11061 7.442364 GCCTGTTATGATTTCTCTATGTAAGCA 59.558 37.037 0.00 0.00 0.00 3.91
7298 11062 7.095017 GGCCTGTTATGATTTCTCTATGTAAGC 60.095 40.741 0.00 0.00 0.00 3.09
7300 11064 7.801104 TGGCCTGTTATGATTTCTCTATGTAA 58.199 34.615 3.32 0.00 0.00 2.41
7302 11066 6.252599 TGGCCTGTTATGATTTCTCTATGT 57.747 37.500 3.32 0.00 0.00 2.29
7303 11067 6.206243 CCTTGGCCTGTTATGATTTCTCTATG 59.794 42.308 3.32 0.00 0.00 2.23
7305 11069 5.397899 CCCTTGGCCTGTTATGATTTCTCTA 60.398 44.000 3.32 0.00 0.00 2.43
7306 11070 4.530875 CCTTGGCCTGTTATGATTTCTCT 58.469 43.478 3.32 0.00 0.00 3.10
7307 11071 3.633986 CCCTTGGCCTGTTATGATTTCTC 59.366 47.826 3.32 0.00 0.00 2.87
7309 11073 3.365472 ACCCTTGGCCTGTTATGATTTC 58.635 45.455 3.32 0.00 0.00 2.17
7334 11106 5.071250 AGACCAATACACACTTGTAGTTCCA 59.929 40.000 0.00 0.00 41.62 3.53
7501 14429 9.807921 TGACAAAGTTTAAGGAGGAAATTATCT 57.192 29.630 0.00 0.00 0.00 1.98
7570 14530 6.381133 GGGGTGAAATCCTCTGTTTCATAATT 59.619 38.462 4.81 0.00 44.56 1.40
7587 14547 1.301423 CGAGTTGTTTCGGGGTGAAA 58.699 50.000 0.00 0.00 44.19 2.69
7588 14548 1.161563 GCGAGTTGTTTCGGGGTGAA 61.162 55.000 0.00 0.00 40.79 3.18
7590 14550 0.320073 TAGCGAGTTGTTTCGGGGTG 60.320 55.000 0.00 0.00 40.79 4.61
7591 14551 0.611714 ATAGCGAGTTGTTTCGGGGT 59.388 50.000 0.00 0.00 40.79 4.95
7592 14552 1.006832 CATAGCGAGTTGTTTCGGGG 58.993 55.000 0.00 0.00 40.79 5.73
7596 14556 5.405571 TCTCTGTTTCATAGCGAGTTGTTTC 59.594 40.000 0.00 0.00 0.00 2.78
7597 14557 5.297547 TCTCTGTTTCATAGCGAGTTGTTT 58.702 37.500 0.00 0.00 0.00 2.83
7598 14558 4.883083 TCTCTGTTTCATAGCGAGTTGTT 58.117 39.130 0.00 0.00 0.00 2.83
7599 14559 4.521130 TCTCTGTTTCATAGCGAGTTGT 57.479 40.909 0.00 0.00 0.00 3.32
7600 14560 7.525688 TTAATCTCTGTTTCATAGCGAGTTG 57.474 36.000 0.00 0.00 0.00 3.16
7601 14561 7.981789 TGATTAATCTCTGTTTCATAGCGAGTT 59.018 33.333 16.24 0.00 0.00 3.01
7602 14562 7.492524 TGATTAATCTCTGTTTCATAGCGAGT 58.507 34.615 16.24 0.00 0.00 4.18
7604 14564 9.981114 TTATGATTAATCTCTGTTTCATAGCGA 57.019 29.630 16.24 0.00 30.33 4.93
7623 14583 7.661847 GGGAGACGACCAGATTAATTTATGATT 59.338 37.037 0.00 0.00 0.00 2.57
7625 14585 6.463897 GGGGAGACGACCAGATTAATTTATGA 60.464 42.308 0.00 0.00 0.00 2.15
7626 14586 5.701290 GGGGAGACGACCAGATTAATTTATG 59.299 44.000 0.00 0.00 0.00 1.90
7627 14587 5.221864 GGGGGAGACGACCAGATTAATTTAT 60.222 44.000 0.00 0.00 0.00 1.40
7630 14590 2.438392 GGGGGAGACGACCAGATTAATT 59.562 50.000 0.00 0.00 0.00 1.40
7631 14591 2.047830 GGGGGAGACGACCAGATTAAT 58.952 52.381 0.00 0.00 0.00 1.40
7632 14592 1.007963 AGGGGGAGACGACCAGATTAA 59.992 52.381 0.00 0.00 0.00 1.40
7635 14595 0.688087 GAAGGGGGAGACGACCAGAT 60.688 60.000 0.00 0.00 0.00 2.90
7637 14597 2.711922 CGAAGGGGGAGACGACCAG 61.712 68.421 0.00 0.00 0.00 4.00
7639 14599 4.144703 GCGAAGGGGGAGACGACC 62.145 72.222 0.00 0.00 0.00 4.79
7640 14600 1.108132 ATAGCGAAGGGGGAGACGAC 61.108 60.000 0.00 0.00 0.00 4.34
7641 14601 1.107538 CATAGCGAAGGGGGAGACGA 61.108 60.000 0.00 0.00 0.00 4.20
7642 14602 1.107538 TCATAGCGAAGGGGGAGACG 61.108 60.000 0.00 0.00 0.00 4.18
7643 14603 1.120530 TTCATAGCGAAGGGGGAGAC 58.879 55.000 0.00 0.00 0.00 3.36
7644 14604 1.485066 GTTTCATAGCGAAGGGGGAGA 59.515 52.381 0.00 0.00 34.32 3.71
7646 14606 1.281419 TGTTTCATAGCGAAGGGGGA 58.719 50.000 0.00 0.00 34.32 4.81
7647 14607 1.743394 GTTGTTTCATAGCGAAGGGGG 59.257 52.381 0.00 0.00 34.32 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.