Multiple sequence alignment - TraesCS6A01G289200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G289200 chr6A 100.000 8730 0 0 1 8730 520926880 520918151 0.000000e+00 16122
1 TraesCS6A01G289200 chr6A 100.000 169 0 0 8871 9039 520918010 520917842 6.810000e-81 313
2 TraesCS6A01G289200 chr6B 94.945 4748 159 32 767 5473 566555253 566550546 0.000000e+00 7363
3 TraesCS6A01G289200 chr6B 93.133 3131 126 36 5471 8530 566550484 566547372 0.000000e+00 4508
4 TraesCS6A01G289200 chr6B 85.992 771 94 13 3 768 644464054 644463293 0.000000e+00 813
5 TraesCS6A01G289200 chr6B 95.152 165 8 0 8564 8728 195836722 195836558 2.500000e-65 261
6 TraesCS6A01G289200 chr6D 95.251 3769 113 23 767 4501 379703476 379707212 0.000000e+00 5908
7 TraesCS6A01G289200 chr6D 94.456 2976 91 33 4504 7445 379710198 379713133 0.000000e+00 4514
8 TraesCS6A01G289200 chr6D 92.439 1111 38 18 7444 8535 379713237 379714320 0.000000e+00 1544
9 TraesCS6A01G289200 chr1A 95.437 767 32 3 1 767 517637579 517638342 0.000000e+00 1219
10 TraesCS6A01G289200 chr3B 88.889 774 76 7 1 768 572847270 572848039 0.000000e+00 944
11 TraesCS6A01G289200 chr3B 97.590 166 4 0 8874 9039 610559953 610560118 1.490000e-72 285
12 TraesCS6A01G289200 chr3B 94.767 172 6 2 8560 8730 308234534 308234703 1.940000e-66 265
13 TraesCS6A01G289200 chr4A 88.442 770 78 9 1 767 725322872 725323633 0.000000e+00 918
14 TraesCS6A01G289200 chr4A 95.706 163 7 0 8564 8726 704636617 704636455 6.960000e-66 263
15 TraesCS6A01G289200 chr5A 87.891 768 82 10 1 767 659423833 659424590 0.000000e+00 893
16 TraesCS6A01G289200 chr5A 96.407 167 6 0 8873 9039 325954499 325954665 8.940000e-70 276
17 TraesCS6A01G289200 chr5A 95.210 167 8 0 8564 8730 570708458 570708292 1.940000e-66 265
18 TraesCS6A01G289200 chr7A 88.666 697 73 5 75 770 475769552 475770243 0.000000e+00 845
19 TraesCS6A01G289200 chr7A 96.319 163 6 0 8568 8730 19699364 19699526 1.500000e-67 268
20 TraesCS6A01G289200 chr7B 86.494 770 91 12 3 767 656515499 656516260 0.000000e+00 833
21 TraesCS6A01G289200 chr7B 85.584 770 96 12 3 767 99918999 99918240 0.000000e+00 793
22 TraesCS6A01G289200 chr7B 94.643 168 8 1 8561 8728 578155007 578155173 9.000000e-65 259
23 TraesCS6A01G289200 chr2D 88.006 717 71 13 57 766 601175187 601175895 0.000000e+00 833
24 TraesCS6A01G289200 chr3D 97.006 167 5 0 8873 9039 19318715 19318549 1.920000e-71 281
25 TraesCS6A01G289200 chr3D 96.407 167 6 0 8873 9039 143231174 143231340 8.940000e-70 276
26 TraesCS6A01G289200 chr3D 96.914 162 5 0 8564 8725 143231013 143231174 1.160000e-68 272
27 TraesCS6A01G289200 chr5B 96.407 167 6 0 8873 9039 469131306 469131140 8.940000e-70 276
28 TraesCS6A01G289200 chr2B 96.407 167 6 0 8873 9039 11030938 11030772 8.940000e-70 276
29 TraesCS6A01G289200 chr2B 95.238 168 8 0 8563 8730 11031109 11030942 5.380000e-67 267
30 TraesCS6A01G289200 chrUn 96.341 164 6 0 8876 9039 307839176 307839339 4.160000e-68 270
31 TraesCS6A01G289200 chrUn 96.341 164 6 0 8876 9039 328018671 328018834 4.160000e-68 270
32 TraesCS6A01G289200 chrUn 96.341 164 6 0 8876 9039 369208262 369208425 4.160000e-68 270
33 TraesCS6A01G289200 chr7D 95.349 172 4 3 8561 8730 490208524 490208693 4.160000e-68 270


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G289200 chr6A 520917842 520926880 9038 True 8217.500000 16122 100.000000 1 9039 2 chr6A.!!$R1 9038
1 TraesCS6A01G289200 chr6B 566547372 566555253 7881 True 5935.500000 7363 94.039000 767 8530 2 chr6B.!!$R3 7763
2 TraesCS6A01G289200 chr6B 644463293 644464054 761 True 813.000000 813 85.992000 3 768 1 chr6B.!!$R2 765
3 TraesCS6A01G289200 chr6D 379703476 379714320 10844 False 3988.666667 5908 94.048667 767 8535 3 chr6D.!!$F1 7768
4 TraesCS6A01G289200 chr1A 517637579 517638342 763 False 1219.000000 1219 95.437000 1 767 1 chr1A.!!$F1 766
5 TraesCS6A01G289200 chr3B 572847270 572848039 769 False 944.000000 944 88.889000 1 768 1 chr3B.!!$F2 767
6 TraesCS6A01G289200 chr4A 725322872 725323633 761 False 918.000000 918 88.442000 1 767 1 chr4A.!!$F1 766
7 TraesCS6A01G289200 chr5A 659423833 659424590 757 False 893.000000 893 87.891000 1 767 1 chr5A.!!$F2 766
8 TraesCS6A01G289200 chr7A 475769552 475770243 691 False 845.000000 845 88.666000 75 770 1 chr7A.!!$F2 695
9 TraesCS6A01G289200 chr7B 656515499 656516260 761 False 833.000000 833 86.494000 3 767 1 chr7B.!!$F2 764
10 TraesCS6A01G289200 chr7B 99918240 99918999 759 True 793.000000 793 85.584000 3 767 1 chr7B.!!$R1 764
11 TraesCS6A01G289200 chr2D 601175187 601175895 708 False 833.000000 833 88.006000 57 766 1 chr2D.!!$F1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
650 670 0.104671 CCCAGTTTGCCAAACAGGTG 59.895 55.000 24.61 15.12 44.05 4.00 F
1416 1457 1.079819 CGTCCTCACCATGACGCTT 60.080 57.895 0.00 0.00 46.41 4.68 F
1655 1715 1.005347 GTGTGTTTCCGTTCACTCACG 60.005 52.381 0.00 0.00 40.02 4.35 F
2591 2655 0.948678 TTGGTCGCTACAAAAGTGCC 59.051 50.000 0.00 0.00 35.56 5.01 F
3980 4046 1.304962 TGGCCTCGCTCCACTTAGA 60.305 57.895 3.32 0.00 0.00 2.10 F
4295 4364 0.607489 CTGTGGCCCAGTGAAAGAGG 60.607 60.000 0.00 0.00 36.37 3.69 F
4323 4392 0.828022 CGCTACCACATTACAGGGGA 59.172 55.000 0.00 0.00 0.00 4.81 F
4784 7838 1.185618 AACTCGCAGTGGCCTGAGTA 61.186 55.000 3.32 0.00 39.03 2.59 F
5347 8405 1.372683 GCTGAGTCCAAGCCTGTGA 59.627 57.895 0.00 0.00 0.00 3.58 F
5853 8979 1.820519 AGCGACCGTTACCAGATTGTA 59.179 47.619 0.00 0.00 0.00 2.41 F
7670 10959 0.534203 TTCACCACCCGCTTTCTGAC 60.534 55.000 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1628 1688 0.741915 AACGGAAACACACGCCAATT 59.258 45.000 0.00 0.00 0.00 2.32 R
2591 2655 2.742372 CGCCCAAGTTGGTCTCCG 60.742 66.667 20.54 12.87 35.17 4.63 R
3450 3516 0.401738 TAAGCTTGGCTGCCTGAGTT 59.598 50.000 21.03 12.60 39.62 3.01 R
4287 4356 0.606604 GCGGTACCACTCCTCTTTCA 59.393 55.000 13.54 0.00 0.00 2.69 R
5734 8859 2.359900 CTTAAAGGGCGTTGATCAGCT 58.640 47.619 8.01 0.00 0.00 4.24 R
6255 9381 3.399305 AGAGTTGAGGGAAGGAAATTGGT 59.601 43.478 0.00 0.00 0.00 3.67 R
6317 9443 0.180406 GGCATGGTTGTCCGGTATCT 59.820 55.000 0.00 0.00 36.30 1.98 R
6318 9444 0.818040 GGGCATGGTTGTCCGGTATC 60.818 60.000 0.00 0.00 38.00 2.24 R
6375 9501 1.180029 GCCATGTGTGAGAAAGCCAT 58.820 50.000 0.00 0.00 0.00 4.40 R
7780 11069 0.474854 TCCTGTAGCACCCCCTTCAA 60.475 55.000 0.00 0.00 0.00 2.69 R
8967 12279 0.036388 TCTTCATGTTCCCACCGCTC 60.036 55.000 0.00 0.00 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
242 252 5.404968 CAGCCAACAAGCGAAATCATTTTTA 59.595 36.000 0.00 0.00 38.01 1.52
400 418 6.734171 TGTTTTTCTTTTTGAAATCGCAAACG 59.266 30.769 0.00 0.00 43.34 3.60
497 517 6.751425 CGCCAAAAATAGAAAGCATGAACATA 59.249 34.615 0.00 0.00 0.00 2.29
569 589 5.120208 CCACGAAGTCTTGTTGTGTTATAGG 59.880 44.000 0.00 0.00 41.61 2.57
572 592 3.951663 AGTCTTGTTGTGTTATAGGGGC 58.048 45.455 0.00 0.00 0.00 5.80
650 670 0.104671 CCCAGTTTGCCAAACAGGTG 59.895 55.000 24.61 15.12 44.05 4.00
712 732 5.929415 GCCAATTTTCGGGATTCAAAGTTTA 59.071 36.000 0.00 0.00 0.00 2.01
904 927 1.993391 GACCCCACGATCCCTGGAA 60.993 63.158 5.75 0.00 0.00 3.53
1064 1093 1.990060 CTCCCTCCCCGAAGCTTCA 60.990 63.158 25.47 5.67 0.00 3.02
1416 1457 1.079819 CGTCCTCACCATGACGCTT 60.080 57.895 0.00 0.00 46.41 4.68
1460 1501 3.425713 ACCGCGCACTTGCTGATG 61.426 61.111 8.75 0.00 39.32 3.07
1469 1520 1.470098 CACTTGCTGATGTTGCTACCC 59.530 52.381 0.00 0.00 0.00 3.69
1505 1556 4.971830 CGATTTGCTCATTTCGTGCATTAT 59.028 37.500 0.00 0.00 43.27 1.28
1506 1557 5.456497 CGATTTGCTCATTTCGTGCATTATT 59.544 36.000 0.00 0.00 43.27 1.40
1507 1558 6.632434 CGATTTGCTCATTTCGTGCATTATTA 59.368 34.615 0.00 0.00 43.27 0.98
1552 1603 3.390135 ACGCCCTGATATTTGTATCGTG 58.610 45.455 0.00 0.00 0.00 4.35
1628 1688 4.947147 GCTTGCGTGGGTGGGTGA 62.947 66.667 0.00 0.00 0.00 4.02
1640 1700 1.152860 TGGGTGAATTGGCGTGTGT 60.153 52.632 0.00 0.00 0.00 3.72
1655 1715 1.005347 GTGTGTTTCCGTTCACTCACG 60.005 52.381 0.00 0.00 40.02 4.35
1685 1745 4.343526 TGCCACTGTATTTGGTCATTTTGT 59.656 37.500 0.00 0.00 36.40 2.83
1694 1754 8.447833 TGTATTTGGTCATTTTGTAATCGAGAC 58.552 33.333 0.00 0.00 0.00 3.36
1711 1771 5.361427 TCGAGACATGTTTGGACTTTGTTA 58.639 37.500 0.00 0.00 0.00 2.41
1712 1772 5.995282 TCGAGACATGTTTGGACTTTGTTAT 59.005 36.000 0.00 0.00 0.00 1.89
1721 1781 8.359060 TGTTTGGACTTTGTTATAACATTTGC 57.641 30.769 18.69 11.46 38.95 3.68
1744 1805 7.489160 TGCTAGTCTTATACTGTATTGTGTGG 58.511 38.462 5.52 0.00 39.39 4.17
1759 1820 4.599047 TGTGTGGGTTTGGATTTTGATC 57.401 40.909 0.00 0.00 0.00 2.92
1767 1828 4.679654 GGTTTGGATTTTGATCGTGTGTTC 59.320 41.667 0.00 0.00 0.00 3.18
1770 1831 2.817258 GGATTTTGATCGTGTGTTCCCA 59.183 45.455 0.00 0.00 0.00 4.37
1785 1846 3.202818 TGTTCCCATGGTTGCAGATATCT 59.797 43.478 11.73 0.00 0.00 1.98
1821 1882 1.431440 CTTCTCGTCAGGGCTCTCG 59.569 63.158 0.00 0.00 0.00 4.04
1863 1924 3.758755 TTCGAGAAGGCAGCATATGAT 57.241 42.857 6.97 0.00 0.00 2.45
1993 2054 4.096984 ACAAGCTATGCTGAATTTGGTAGC 59.903 41.667 0.00 0.00 39.62 3.58
2264 2326 7.011950 CACCATGATCAAGTAGGCGTTATTTTA 59.988 37.037 0.00 0.00 0.00 1.52
2267 2329 8.559536 CATGATCAAGTAGGCGTTATTTTATGT 58.440 33.333 0.00 0.00 0.00 2.29
2345 2408 7.277098 CAGAAGTATTTGCTATTTTTGCAGCAT 59.723 33.333 0.00 0.00 41.71 3.79
2401 2464 8.619546 GCATTTCTGATTAGTTTAGCTTCTCAT 58.380 33.333 0.00 0.00 0.00 2.90
2478 2542 7.406031 AAATGAGACAATCTGAATGCATCTT 57.594 32.000 0.00 0.00 0.00 2.40
2591 2655 0.948678 TTGGTCGCTACAAAAGTGCC 59.051 50.000 0.00 0.00 35.56 5.01
3456 3522 9.113838 ACTTGGATATGTTAATTGCTAACTCAG 57.886 33.333 0.00 0.00 40.62 3.35
3461 3527 3.440173 TGTTAATTGCTAACTCAGGCAGC 59.560 43.478 0.00 0.00 40.62 5.25
3541 3607 5.163513 GTCAAACTGGCAAATTAGACATGG 58.836 41.667 0.00 0.00 0.00 3.66
3644 3710 2.967362 TGTCGGCGTTGTCTTATTCAT 58.033 42.857 6.85 0.00 0.00 2.57
3754 3820 2.426738 TGTTCTTGAAAACTGGGTGCAG 59.573 45.455 0.00 0.00 0.00 4.41
3897 3963 6.825721 TCAATTTTTATGTTTTTGCCACCACT 59.174 30.769 0.00 0.00 0.00 4.00
3980 4046 1.304962 TGGCCTCGCTCCACTTAGA 60.305 57.895 3.32 0.00 0.00 2.10
4109 4175 1.340017 GGCCAAACTGGATCAGCAGTA 60.340 52.381 0.00 0.00 40.96 2.74
4287 4356 1.770110 TGAACTCCTGTGGCCCAGT 60.770 57.895 16.96 2.30 39.74 4.00
4295 4364 0.607489 CTGTGGCCCAGTGAAAGAGG 60.607 60.000 0.00 0.00 36.37 3.69
4323 4392 0.828022 CGCTACCACATTACAGGGGA 59.172 55.000 0.00 0.00 0.00 4.81
4324 4393 1.208535 CGCTACCACATTACAGGGGAA 59.791 52.381 0.00 0.00 0.00 3.97
4341 4410 3.181426 GGGGAAAAGGAGTAAAGGGTTCA 60.181 47.826 0.00 0.00 0.00 3.18
4353 4422 4.576330 AAAGGGTTCATCCTTACCTCTG 57.424 45.455 0.00 0.00 45.67 3.35
4384 4453 9.269453 ACTTAAGGGCTAAGCTAAATAATAACG 57.731 33.333 7.53 0.00 40.78 3.18
4387 4456 6.296803 AGGGCTAAGCTAAATAATAACGCTT 58.703 36.000 0.00 0.00 42.82 4.68
4388 4457 6.427242 AGGGCTAAGCTAAATAATAACGCTTC 59.573 38.462 0.00 0.00 40.88 3.86
4435 4504 6.070767 TCCTAACTGAAAAGATGACTCGGATT 60.071 38.462 0.00 0.00 0.00 3.01
4472 4541 1.555533 GTCAGCTAGGGCCAGTTAAGT 59.444 52.381 6.18 0.00 39.73 2.24
4501 4570 2.598632 GGACTGTCAGCGTGTGTGC 61.599 63.158 10.38 0.00 0.00 4.57
4502 4571 1.882625 GACTGTCAGCGTGTGTGCA 60.883 57.895 2.24 0.00 37.31 4.57
4550 7602 7.627298 TTTCTATCCTATACTATGAGGCGTC 57.373 40.000 0.00 0.00 32.40 5.19
4615 7669 8.975410 TTGATGTTGCTTGATTAATCTGAAAG 57.025 30.769 16.24 12.11 0.00 2.62
4732 7786 6.011451 GGATAGGAGGAGGAGGAGACTTAATA 60.011 46.154 0.00 0.00 44.43 0.98
4784 7838 1.185618 AACTCGCAGTGGCCTGAGTA 61.186 55.000 3.32 0.00 39.03 2.59
4912 7966 7.751348 TGCAAATTTGATGTATACGTTTGTACC 59.249 33.333 22.31 0.00 32.26 3.34
5222 8280 2.696506 TGCTCTTGCTTCTGATCTGTG 58.303 47.619 0.00 0.00 40.48 3.66
5232 8290 2.533916 TCTGATCTGTGAGTTCTGCCT 58.466 47.619 0.00 0.00 0.00 4.75
5347 8405 1.372683 GCTGAGTCCAAGCCTGTGA 59.627 57.895 0.00 0.00 0.00 3.58
5495 8617 6.183347 ACCTTCTATTTGTGCTTGCTAAGAT 58.817 36.000 0.00 0.00 0.00 2.40
5511 8633 6.875076 TGCTAAGATTAGTAACAGGTCTTCC 58.125 40.000 0.76 0.00 33.32 3.46
5512 8634 6.439375 TGCTAAGATTAGTAACAGGTCTTCCA 59.561 38.462 0.76 0.00 33.05 3.53
5559 8681 3.857157 ACAGTCTCAACTTTGGGCTTA 57.143 42.857 0.00 0.00 31.71 3.09
5621 8746 6.671614 TGTCGTTGAGTGTTTGTTTCTTAT 57.328 33.333 0.00 0.00 0.00 1.73
5773 8898 8.137437 CCTTTAAGGTAATATTGGCACTTCATG 58.863 37.037 2.20 0.00 0.00 3.07
5840 8966 2.202797 CACAGGATCCAGCGACCG 60.203 66.667 15.82 0.00 0.00 4.79
5853 8979 1.820519 AGCGACCGTTACCAGATTGTA 59.179 47.619 0.00 0.00 0.00 2.41
5876 9002 6.642683 AACAAAAATAGTCTGATACCGTCG 57.357 37.500 0.00 0.00 0.00 5.12
5878 9004 5.105635 ACAAAAATAGTCTGATACCGTCGGA 60.106 40.000 20.51 1.60 39.94 4.55
5964 9090 1.857837 CAATGGTTCAACGTGTTTGCC 59.142 47.619 0.00 0.00 34.88 4.52
5981 9107 6.016610 GTGTTTGCCTTTAATAGACAAGTGGA 60.017 38.462 0.00 0.00 0.00 4.02
6031 9157 6.767902 TCATAAATCAAGCAGATTGTACCCTC 59.232 38.462 5.33 0.00 46.09 4.30
6106 9232 2.679837 ACAGCAAATGCCGACTCTTATG 59.320 45.455 0.94 0.00 43.38 1.90
6189 9315 8.316946 TGACATATTTGATTTTGCCAATAACCA 58.683 29.630 0.00 0.00 0.00 3.67
6234 9360 9.736023 TTCTCTGTTTCTTTTAAAAGCATTCTC 57.264 29.630 20.93 9.62 35.99 2.87
6236 9362 9.178427 CTCTGTTTCTTTTAAAAGCATTCTCTG 57.822 33.333 20.93 11.86 35.99 3.35
6255 9381 6.533730 TCTCTGTTAGAAAGGAAGCATGAAA 58.466 36.000 0.00 0.00 0.00 2.69
6266 9392 4.594491 AGGAAGCATGAAACCAATTTCCTT 59.406 37.500 0.00 0.00 43.18 3.36
6297 9423 7.654022 ACTCTAGGCCTAATTCAGATATAGC 57.346 40.000 14.85 0.00 0.00 2.97
6318 9444 2.883026 CCCCCTAGATGGTAGACTCAG 58.117 57.143 0.00 0.00 0.00 3.35
6358 9484 3.054139 CCCTCAACTCTTGAATCCATGGA 60.054 47.826 18.88 18.88 39.58 3.41
6375 9501 1.064832 TGGATTTGGATGACATGGCGA 60.065 47.619 0.00 0.00 0.00 5.54
6496 9631 9.462606 AAAATAGGAACAACCATAAAGTCTAGG 57.537 33.333 0.00 0.00 42.04 3.02
6549 9685 8.561932 AAACTAGAAAATTTGAGAAAACTCGC 57.438 30.769 0.00 0.00 0.00 5.03
6563 9699 6.573434 AGAAAACTCGCAAAGAAGGAAAATT 58.427 32.000 0.00 0.00 0.00 1.82
6564 9700 7.041721 AGAAAACTCGCAAAGAAGGAAAATTT 58.958 30.769 0.00 0.00 0.00 1.82
6580 9716 5.696270 GGAAAATTTGAAAAGAAGTGCGGAT 59.304 36.000 0.00 0.00 0.00 4.18
6624 9760 2.756760 AGGCTAACTATGACGGTTTCGA 59.243 45.455 0.00 0.00 40.11 3.71
6692 9828 9.671279 AATTATTTGTGAATTTCCCCAGATTTC 57.329 29.630 0.00 0.00 0.00 2.17
6693 9829 5.482163 TTTGTGAATTTCCCCAGATTTCC 57.518 39.130 0.00 0.00 0.00 3.13
6834 9975 0.964358 ACCTGGCTGCTTCATGCTTC 60.964 55.000 0.00 0.00 43.37 3.86
6839 9980 0.879765 GCTGCTTCATGCTTCACTGT 59.120 50.000 0.00 0.00 43.37 3.55
6841 9982 2.921069 GCTGCTTCATGCTTCACTGTTG 60.921 50.000 0.00 0.00 43.37 3.33
6875 10016 5.307976 TCTGGTATTGCTCTATTGGCATAGT 59.692 40.000 0.00 0.00 39.54 2.12
6887 10030 1.691434 TGGCATAGTGTCTGTGTGTGA 59.309 47.619 0.00 0.00 0.00 3.58
6917 10068 7.233962 TGACTCCTTGTACTGTCTATTTTGGTA 59.766 37.037 0.00 0.00 0.00 3.25
6934 10085 6.751514 TTTGGTATGTGCAATACTACAAGG 57.248 37.500 14.53 0.00 0.00 3.61
7108 10259 7.095060 GCTCAATGAGTGTAAGAATTGTTCTCA 60.095 37.037 12.29 7.42 33.56 3.27
7133 10284 9.624697 CAGATACTGAGTAGCTCATATTTCTTC 57.375 37.037 7.52 0.00 39.92 2.87
7318 10469 5.770162 CACAGGATAAGAAGGTTGGTTCTTT 59.230 40.000 4.30 0.00 42.93 2.52
7366 10519 1.065851 CGTCTGCCATGCATGCATAAA 59.934 47.619 31.73 18.66 38.13 1.40
7373 10526 7.859377 GTCTGCCATGCATGCATAAATATATAC 59.141 37.037 31.73 17.66 38.13 1.47
7374 10527 7.776500 TCTGCCATGCATGCATAAATATATACT 59.224 33.333 31.73 4.38 38.13 2.12
7375 10528 8.977267 TGCCATGCATGCATAAATATATACTA 57.023 30.769 31.73 0.00 34.91 1.82
7588 10847 8.754991 TTCCTAGTTTTGGAAATTCACTTGTA 57.245 30.769 0.00 0.00 40.25 2.41
7624 10883 3.198635 AGCTGCAGTATTCATAGTGTGGT 59.801 43.478 16.64 1.43 36.35 4.16
7636 10895 4.819630 TCATAGTGTGGTTTTGAGTGGAAC 59.180 41.667 0.00 0.00 0.00 3.62
7663 10952 1.407656 TTGAGAGTTCACCACCCGCT 61.408 55.000 0.00 0.00 31.71 5.52
7670 10959 0.534203 TTCACCACCCGCTTTCTGAC 60.534 55.000 0.00 0.00 0.00 3.51
7780 11069 3.662759 TTCTTGGAGTTGACAGGGTTT 57.337 42.857 0.00 0.00 0.00 3.27
7925 11214 8.594687 GGAAATCACAAATTATTTCGGTTGATG 58.405 33.333 5.67 0.00 41.12 3.07
7991 11280 6.876257 AGAAGACAGAAGTGACATGGAAATAC 59.124 38.462 0.00 0.00 0.00 1.89
8082 11371 2.242047 TGCAAGCGTTGTAACCTGTA 57.758 45.000 0.00 0.00 0.00 2.74
8144 11433 0.109132 GTTTGCTTGATCTTGCCCCG 60.109 55.000 7.77 0.00 0.00 5.73
8293 11589 2.620585 GGAGATCCAGTAAAGCATTGCC 59.379 50.000 4.70 0.00 35.64 4.52
8385 11689 2.224402 GGCCCTAGCTTCTGGATTGTAG 60.224 54.545 0.00 0.00 39.73 2.74
8392 11696 5.091261 AGCTTCTGGATTGTAGTTGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
8401 11705 5.294552 GGATTGTAGTTGTAGGATGTTGAGC 59.705 44.000 0.00 0.00 0.00 4.26
8403 11707 5.222079 TGTAGTTGTAGGATGTTGAGCAA 57.778 39.130 0.00 0.00 0.00 3.91
8422 11726 7.271511 TGAGCAAAACTTCCACATTTTTACAT 58.728 30.769 0.00 0.00 0.00 2.29
8472 11784 4.130118 ACTCAACTTTGTCTTGTAGCCAG 58.870 43.478 0.00 0.00 0.00 4.85
8535 11847 7.007723 TGAGAAAATAAAGGTCCTTGGCTAAA 58.992 34.615 4.45 0.00 0.00 1.85
8536 11848 7.673926 TGAGAAAATAAAGGTCCTTGGCTAAAT 59.326 33.333 4.45 0.00 0.00 1.40
8537 11849 7.840931 AGAAAATAAAGGTCCTTGGCTAAATG 58.159 34.615 4.45 0.00 0.00 2.32
8538 11850 7.454694 AGAAAATAAAGGTCCTTGGCTAAATGT 59.545 33.333 4.45 0.00 0.00 2.71
8539 11851 6.775594 AATAAAGGTCCTTGGCTAAATGTC 57.224 37.500 4.45 0.00 0.00 3.06
8540 11852 4.388577 AAAGGTCCTTGGCTAAATGTCT 57.611 40.909 4.45 0.00 0.00 3.41
8541 11853 3.636153 AGGTCCTTGGCTAAATGTCTC 57.364 47.619 0.00 0.00 0.00 3.36
8542 11854 2.912956 AGGTCCTTGGCTAAATGTCTCA 59.087 45.455 0.00 0.00 0.00 3.27
8543 11855 3.525199 AGGTCCTTGGCTAAATGTCTCAT 59.475 43.478 0.00 0.00 0.00 2.90
8544 11856 3.629398 GGTCCTTGGCTAAATGTCTCATG 59.371 47.826 0.00 0.00 0.00 3.07
8545 11857 3.065925 GTCCTTGGCTAAATGTCTCATGC 59.934 47.826 0.00 0.00 0.00 4.06
8546 11858 2.032550 CCTTGGCTAAATGTCTCATGCG 59.967 50.000 0.00 0.00 0.00 4.73
8547 11859 2.401583 TGGCTAAATGTCTCATGCGT 57.598 45.000 0.00 0.00 0.00 5.24
8548 11860 2.009051 TGGCTAAATGTCTCATGCGTG 58.991 47.619 0.00 0.00 0.00 5.34
8549 11861 2.009774 GGCTAAATGTCTCATGCGTGT 58.990 47.619 5.68 0.00 0.00 4.49
8550 11862 3.194861 GGCTAAATGTCTCATGCGTGTA 58.805 45.455 5.68 0.00 0.00 2.90
8551 11863 3.246226 GGCTAAATGTCTCATGCGTGTAG 59.754 47.826 5.68 2.62 0.00 2.74
8552 11864 4.112634 GCTAAATGTCTCATGCGTGTAGA 58.887 43.478 5.68 5.00 0.00 2.59
8553 11865 4.566759 GCTAAATGTCTCATGCGTGTAGAA 59.433 41.667 5.68 0.75 0.00 2.10
8554 11866 4.928661 AAATGTCTCATGCGTGTAGAAC 57.071 40.909 5.68 1.35 0.00 3.01
8555 11867 3.592898 ATGTCTCATGCGTGTAGAACA 57.407 42.857 5.68 6.82 0.00 3.18
8556 11868 3.378911 TGTCTCATGCGTGTAGAACAA 57.621 42.857 5.68 0.00 0.00 2.83
8557 11869 3.057019 TGTCTCATGCGTGTAGAACAAC 58.943 45.455 5.68 0.00 0.00 3.32
8558 11870 2.412089 GTCTCATGCGTGTAGAACAACC 59.588 50.000 5.68 0.00 0.00 3.77
8559 11871 2.036604 TCTCATGCGTGTAGAACAACCA 59.963 45.455 5.68 0.00 0.00 3.67
8560 11872 3.002791 CTCATGCGTGTAGAACAACCAT 58.997 45.455 5.68 0.00 0.00 3.55
8561 11873 3.407698 TCATGCGTGTAGAACAACCATT 58.592 40.909 5.68 0.00 0.00 3.16
8562 11874 3.188254 TCATGCGTGTAGAACAACCATTG 59.812 43.478 5.68 0.00 0.00 2.82
8564 11876 2.289274 TGCGTGTAGAACAACCATTGTG 59.711 45.455 0.00 0.00 44.59 3.33
8565 11877 2.289547 GCGTGTAGAACAACCATTGTGT 59.710 45.455 0.00 0.00 44.59 3.72
8566 11878 3.242936 GCGTGTAGAACAACCATTGTGTT 60.243 43.478 0.00 0.00 44.59 3.32
8568 11880 4.034626 CGTGTAGAACAACCATTGTGTTGA 59.965 41.667 18.73 1.26 46.77 3.18
8569 11881 5.447954 CGTGTAGAACAACCATTGTGTTGAA 60.448 40.000 18.73 4.98 46.77 2.69
8570 11882 5.971202 GTGTAGAACAACCATTGTGTTGAAG 59.029 40.000 18.73 1.00 46.77 3.02
8571 11883 4.654091 AGAACAACCATTGTGTTGAAGG 57.346 40.909 18.73 0.00 46.77 3.46
8572 11884 2.888834 ACAACCATTGTGTTGAAGGC 57.111 45.000 18.73 0.00 46.77 4.35
8573 11885 2.106566 ACAACCATTGTGTTGAAGGCA 58.893 42.857 18.73 0.00 46.77 4.75
8574 11886 2.499289 ACAACCATTGTGTTGAAGGCAA 59.501 40.909 18.73 0.00 46.77 4.52
8575 11887 3.134442 ACAACCATTGTGTTGAAGGCAAT 59.866 39.130 18.73 0.00 46.77 3.56
8576 11888 3.389925 ACCATTGTGTTGAAGGCAATG 57.610 42.857 12.06 12.06 45.18 2.82
8577 11889 2.070783 CCATTGTGTTGAAGGCAATGC 58.929 47.619 13.04 0.00 44.60 3.56
8578 11890 2.548280 CCATTGTGTTGAAGGCAATGCA 60.548 45.455 7.79 0.00 44.60 3.96
8579 11891 2.975732 TTGTGTTGAAGGCAATGCAA 57.024 40.000 7.79 0.00 36.22 4.08
8580 11892 2.222007 TGTGTTGAAGGCAATGCAAC 57.778 45.000 7.79 3.26 41.57 4.17
8581 11893 1.755959 TGTGTTGAAGGCAATGCAACT 59.244 42.857 7.79 0.00 41.71 3.16
8582 11894 2.223782 TGTGTTGAAGGCAATGCAACTC 60.224 45.455 7.79 9.40 41.71 3.01
8583 11895 2.035066 GTGTTGAAGGCAATGCAACTCT 59.965 45.455 7.79 0.00 41.71 3.24
8584 11896 2.694628 TGTTGAAGGCAATGCAACTCTT 59.305 40.909 7.79 0.26 41.71 2.85
8585 11897 3.054878 GTTGAAGGCAATGCAACTCTTG 58.945 45.455 7.79 0.00 38.96 3.02
8586 11898 2.585330 TGAAGGCAATGCAACTCTTGA 58.415 42.857 7.79 0.00 0.00 3.02
8587 11899 3.159472 TGAAGGCAATGCAACTCTTGAT 58.841 40.909 7.79 0.00 0.00 2.57
8588 11900 3.057104 TGAAGGCAATGCAACTCTTGATG 60.057 43.478 7.79 0.00 0.00 3.07
8589 11901 2.522185 AGGCAATGCAACTCTTGATGT 58.478 42.857 7.79 0.00 0.00 3.06
8590 11902 3.689347 AGGCAATGCAACTCTTGATGTA 58.311 40.909 7.79 0.00 0.00 2.29
8591 11903 4.275810 AGGCAATGCAACTCTTGATGTAT 58.724 39.130 7.79 0.00 0.00 2.29
8592 11904 4.708421 AGGCAATGCAACTCTTGATGTATT 59.292 37.500 7.79 0.00 33.21 1.89
8593 11905 4.802039 GGCAATGCAACTCTTGATGTATTG 59.198 41.667 7.79 10.81 36.74 1.90
8594 11906 5.393352 GGCAATGCAACTCTTGATGTATTGA 60.393 40.000 16.96 0.00 36.74 2.57
8595 11907 6.270815 GCAATGCAACTCTTGATGTATTGAT 58.729 36.000 16.96 0.00 36.74 2.57
8596 11908 6.417044 GCAATGCAACTCTTGATGTATTGATC 59.583 38.462 16.96 0.00 36.74 2.92
8597 11909 5.723492 TGCAACTCTTGATGTATTGATCG 57.277 39.130 0.00 0.00 0.00 3.69
8598 11910 4.571984 TGCAACTCTTGATGTATTGATCGG 59.428 41.667 0.00 0.00 0.00 4.18
8599 11911 4.024556 GCAACTCTTGATGTATTGATCGGG 60.025 45.833 0.00 0.00 0.00 5.14
8600 11912 5.118990 CAACTCTTGATGTATTGATCGGGT 58.881 41.667 0.00 0.00 0.00 5.28
8601 11913 4.697514 ACTCTTGATGTATTGATCGGGTG 58.302 43.478 0.00 0.00 0.00 4.61
8602 11914 3.466836 TCTTGATGTATTGATCGGGTGC 58.533 45.455 0.00 0.00 0.00 5.01
8603 11915 2.998316 TGATGTATTGATCGGGTGCA 57.002 45.000 0.00 0.00 0.00 4.57
8604 11916 2.560504 TGATGTATTGATCGGGTGCAC 58.439 47.619 8.80 8.80 0.00 4.57
8605 11917 1.526887 GATGTATTGATCGGGTGCACG 59.473 52.381 11.45 0.00 0.00 5.34
8626 11938 5.541098 CGATGCACGTATATCTAGGTACA 57.459 43.478 0.00 0.00 37.22 2.90
8627 11939 5.934921 CGATGCACGTATATCTAGGTACAA 58.065 41.667 0.00 0.00 37.22 2.41
8628 11940 6.022208 CGATGCACGTATATCTAGGTACAAG 58.978 44.000 0.00 0.00 37.22 3.16
8629 11941 5.700722 TGCACGTATATCTAGGTACAAGG 57.299 43.478 0.00 0.00 0.00 3.61
8630 11942 4.521639 TGCACGTATATCTAGGTACAAGGG 59.478 45.833 0.00 0.00 0.00 3.95
8631 11943 4.617762 GCACGTATATCTAGGTACAAGGGC 60.618 50.000 0.00 0.00 0.00 5.19
8632 11944 4.521639 CACGTATATCTAGGTACAAGGGCA 59.478 45.833 0.00 0.00 0.00 5.36
8633 11945 4.765856 ACGTATATCTAGGTACAAGGGCAG 59.234 45.833 0.00 0.00 0.00 4.85
8634 11946 4.380655 CGTATATCTAGGTACAAGGGCAGC 60.381 50.000 0.00 0.00 0.00 5.25
8635 11947 1.132500 ATCTAGGTACAAGGGCAGCC 58.868 55.000 1.26 1.26 0.00 4.85
8636 11948 0.981277 TCTAGGTACAAGGGCAGCCC 60.981 60.000 24.90 24.90 45.90 5.19
8647 11959 2.203181 GCAGCCCTCAGCCTCATC 60.203 66.667 0.00 0.00 45.47 2.92
8648 11960 2.744243 GCAGCCCTCAGCCTCATCT 61.744 63.158 0.00 0.00 45.47 2.90
8649 11961 1.406065 GCAGCCCTCAGCCTCATCTA 61.406 60.000 0.00 0.00 45.47 1.98
8650 11962 1.350071 CAGCCCTCAGCCTCATCTAT 58.650 55.000 0.00 0.00 45.47 1.98
8651 11963 2.533916 CAGCCCTCAGCCTCATCTATA 58.466 52.381 0.00 0.00 45.47 1.31
8652 11964 2.233431 CAGCCCTCAGCCTCATCTATAC 59.767 54.545 0.00 0.00 45.47 1.47
8653 11965 2.158249 AGCCCTCAGCCTCATCTATACA 60.158 50.000 0.00 0.00 45.47 2.29
8654 11966 2.634940 GCCCTCAGCCTCATCTATACAA 59.365 50.000 0.00 0.00 34.35 2.41
8655 11967 3.306641 GCCCTCAGCCTCATCTATACAAG 60.307 52.174 0.00 0.00 34.35 3.16
8656 11968 3.260380 CCCTCAGCCTCATCTATACAAGG 59.740 52.174 0.00 0.00 0.00 3.61
8657 11969 4.155709 CCTCAGCCTCATCTATACAAGGA 58.844 47.826 0.00 0.00 0.00 3.36
8658 11970 4.590647 CCTCAGCCTCATCTATACAAGGAA 59.409 45.833 0.00 0.00 0.00 3.36
8659 11971 5.070981 CCTCAGCCTCATCTATACAAGGAAA 59.929 44.000 0.00 0.00 0.00 3.13
8660 11972 5.918608 TCAGCCTCATCTATACAAGGAAAC 58.081 41.667 0.00 0.00 0.00 2.78
8662 11974 6.839134 TCAGCCTCATCTATACAAGGAAACTA 59.161 38.462 0.00 0.00 42.68 2.24
8663 11975 7.014711 TCAGCCTCATCTATACAAGGAAACTAG 59.985 40.741 0.00 0.00 42.68 2.57
8664 11976 7.014711 CAGCCTCATCTATACAAGGAAACTAGA 59.985 40.741 0.00 0.00 42.68 2.43
8665 11977 7.232534 AGCCTCATCTATACAAGGAAACTAGAG 59.767 40.741 0.00 0.00 42.68 2.43
8666 11978 7.524698 GCCTCATCTATACAAGGAAACTAGAGG 60.525 44.444 0.00 0.00 42.68 3.69
8667 11979 7.291411 TCATCTATACAAGGAAACTAGAGGC 57.709 40.000 0.00 0.00 42.68 4.70
8668 11980 5.769484 TCTATACAAGGAAACTAGAGGCG 57.231 43.478 0.00 0.00 42.68 5.52
8669 11981 3.821421 ATACAAGGAAACTAGAGGCGG 57.179 47.619 0.00 0.00 42.68 6.13
8670 11982 0.613777 ACAAGGAAACTAGAGGCGGG 59.386 55.000 0.00 0.00 42.68 6.13
8671 11983 0.107654 CAAGGAAACTAGAGGCGGGG 60.108 60.000 0.00 0.00 42.68 5.73
8672 11984 1.911702 AAGGAAACTAGAGGCGGGGC 61.912 60.000 0.00 0.00 42.68 5.80
8684 11996 2.842936 CGGGGCCGGTAGGAGATT 60.843 66.667 1.90 0.00 41.02 2.40
8685 11997 1.532316 CGGGGCCGGTAGGAGATTA 60.532 63.158 1.90 0.00 41.02 1.75
8686 11998 0.903454 CGGGGCCGGTAGGAGATTAT 60.903 60.000 1.90 0.00 41.02 1.28
8687 11999 0.903236 GGGGCCGGTAGGAGATTATC 59.097 60.000 1.90 0.00 41.02 1.75
8703 12015 7.615403 GGAGATTATCCTAACAGATACATGCA 58.385 38.462 0.00 0.00 45.64 3.96
8704 12016 7.547370 GGAGATTATCCTAACAGATACATGCAC 59.453 40.741 0.00 0.00 45.64 4.57
8705 12017 7.966812 AGATTATCCTAACAGATACATGCACA 58.033 34.615 0.00 0.00 0.00 4.57
8706 12018 8.432013 AGATTATCCTAACAGATACATGCACAA 58.568 33.333 0.00 0.00 0.00 3.33
8707 12019 8.978874 ATTATCCTAACAGATACATGCACAAA 57.021 30.769 0.00 0.00 0.00 2.83
8708 12020 8.978874 TTATCCTAACAGATACATGCACAAAT 57.021 30.769 0.00 0.00 0.00 2.32
8711 12023 8.382030 TCCTAACAGATACATGCACAAATATG 57.618 34.615 0.00 0.00 0.00 1.78
8712 12024 7.992608 TCCTAACAGATACATGCACAAATATGT 59.007 33.333 0.00 0.00 41.61 2.29
8713 12025 8.623903 CCTAACAGATACATGCACAAATATGTT 58.376 33.333 16.44 16.44 37.82 2.71
8714 12026 9.655769 CTAACAGATACATGCACAAATATGTTC 57.344 33.333 15.95 5.58 37.82 3.18
8715 12027 7.628769 ACAGATACATGCACAAATATGTTCA 57.371 32.000 0.00 0.00 37.82 3.18
8716 12028 8.054152 ACAGATACATGCACAAATATGTTCAA 57.946 30.769 0.00 0.00 36.30 2.69
8717 12029 7.970061 ACAGATACATGCACAAATATGTTCAAC 59.030 33.333 0.00 0.00 36.30 3.18
8718 12030 7.969508 CAGATACATGCACAAATATGTTCAACA 59.030 33.333 0.00 0.00 36.30 3.33
8719 12031 7.970061 AGATACATGCACAAATATGTTCAACAC 59.030 33.333 0.00 0.00 36.30 3.32
8720 12032 5.229423 ACATGCACAAATATGTTCAACACC 58.771 37.500 0.00 0.00 36.30 4.16
8721 12033 4.250116 TGCACAAATATGTTCAACACCC 57.750 40.909 0.00 0.00 37.82 4.61
8722 12034 3.006323 TGCACAAATATGTTCAACACCCC 59.994 43.478 0.00 0.00 37.82 4.95
8723 12035 3.616317 GCACAAATATGTTCAACACCCCC 60.616 47.826 0.00 0.00 37.82 5.40
8887 12199 2.101575 GGCGCAGTCGATACGTCA 59.898 61.111 10.83 0.00 38.10 4.35
8888 12200 2.222217 GGCGCAGTCGATACGTCAC 61.222 63.158 10.83 0.00 38.10 3.67
8889 12201 2.222217 GCGCAGTCGATACGTCACC 61.222 63.158 0.30 0.00 38.10 4.02
8890 12202 1.135939 CGCAGTCGATACGTCACCA 59.864 57.895 0.00 0.00 38.10 4.17
8891 12203 0.861866 CGCAGTCGATACGTCACCAG 60.862 60.000 0.00 0.00 38.10 4.00
8892 12204 0.170561 GCAGTCGATACGTCACCAGT 59.829 55.000 0.00 0.00 0.00 4.00
8893 12205 1.896345 CAGTCGATACGTCACCAGTG 58.104 55.000 0.00 0.00 0.00 3.66
8894 12206 1.467342 CAGTCGATACGTCACCAGTGA 59.533 52.381 0.00 0.00 37.24 3.41
8904 12216 1.545841 TCACCAGTGACGCATAGACT 58.454 50.000 0.00 0.00 34.14 3.24
8905 12217 1.202348 TCACCAGTGACGCATAGACTG 59.798 52.381 0.00 0.00 37.45 3.51
8908 12220 1.914634 CAGTGACGCATAGACTGGAC 58.085 55.000 0.00 0.00 34.63 4.02
8909 12221 0.818296 AGTGACGCATAGACTGGACC 59.182 55.000 0.00 0.00 0.00 4.46
8910 12222 0.525668 GTGACGCATAGACTGGACCG 60.526 60.000 0.00 0.00 0.00 4.79
8911 12223 1.065928 GACGCATAGACTGGACCGG 59.934 63.158 0.00 0.00 0.00 5.28
8912 12224 1.379443 ACGCATAGACTGGACCGGA 60.379 57.895 9.46 0.00 0.00 5.14
8913 12225 0.968901 ACGCATAGACTGGACCGGAA 60.969 55.000 9.46 0.00 0.00 4.30
8914 12226 0.527817 CGCATAGACTGGACCGGAAC 60.528 60.000 9.46 0.00 0.00 3.62
8915 12227 0.824759 GCATAGACTGGACCGGAACT 59.175 55.000 9.46 8.50 0.00 3.01
8916 12228 1.202428 GCATAGACTGGACCGGAACTC 60.202 57.143 9.46 0.00 0.00 3.01
8917 12229 1.409427 CATAGACTGGACCGGAACTCC 59.591 57.143 9.46 5.31 0.00 3.85
8918 12230 0.702902 TAGACTGGACCGGAACTCCT 59.297 55.000 9.46 0.00 0.00 3.69
8919 12231 0.612453 AGACTGGACCGGAACTCCTC 60.612 60.000 9.46 0.00 0.00 3.71
8920 12232 0.898789 GACTGGACCGGAACTCCTCA 60.899 60.000 9.46 0.00 0.00 3.86
8921 12233 0.471211 ACTGGACCGGAACTCCTCAA 60.471 55.000 9.46 0.00 0.00 3.02
8922 12234 0.685097 CTGGACCGGAACTCCTCAAA 59.315 55.000 9.46 0.00 0.00 2.69
8923 12235 1.279271 CTGGACCGGAACTCCTCAAAT 59.721 52.381 9.46 0.00 0.00 2.32
8924 12236 1.003118 TGGACCGGAACTCCTCAAATG 59.997 52.381 9.46 0.00 0.00 2.32
8925 12237 1.003233 GGACCGGAACTCCTCAAATGT 59.997 52.381 9.46 0.00 0.00 2.71
8926 12238 2.235402 GGACCGGAACTCCTCAAATGTA 59.765 50.000 9.46 0.00 0.00 2.29
8927 12239 3.522553 GACCGGAACTCCTCAAATGTAG 58.477 50.000 9.46 0.00 0.00 2.74
8928 12240 2.236395 ACCGGAACTCCTCAAATGTAGG 59.764 50.000 9.46 0.00 35.26 3.18
8929 12241 2.280628 CGGAACTCCTCAAATGTAGGC 58.719 52.381 0.00 0.00 33.84 3.93
8930 12242 2.280628 GGAACTCCTCAAATGTAGGCG 58.719 52.381 0.00 0.00 33.84 5.52
8931 12243 2.354805 GGAACTCCTCAAATGTAGGCGT 60.355 50.000 0.00 0.00 33.49 5.68
8932 12244 2.674796 ACTCCTCAAATGTAGGCGTC 57.325 50.000 0.00 0.00 33.84 5.19
8933 12245 1.135083 ACTCCTCAAATGTAGGCGTCG 60.135 52.381 0.00 0.00 33.84 5.12
8934 12246 0.174845 TCCTCAAATGTAGGCGTCGG 59.825 55.000 0.00 0.00 33.84 4.79
8935 12247 0.108329 CCTCAAATGTAGGCGTCGGT 60.108 55.000 0.00 0.00 0.00 4.69
8936 12248 1.135527 CCTCAAATGTAGGCGTCGGTA 59.864 52.381 0.00 0.00 0.00 4.02
8937 12249 2.417651 CCTCAAATGTAGGCGTCGGTAA 60.418 50.000 0.00 0.00 0.00 2.85
8938 12250 2.601763 CTCAAATGTAGGCGTCGGTAAC 59.398 50.000 0.00 0.00 0.00 2.50
8939 12251 1.662122 CAAATGTAGGCGTCGGTAACC 59.338 52.381 0.00 0.00 0.00 2.85
8940 12252 0.176449 AATGTAGGCGTCGGTAACCC 59.824 55.000 0.00 0.00 0.00 4.11
8941 12253 1.679559 ATGTAGGCGTCGGTAACCCC 61.680 60.000 0.00 0.00 0.00 4.95
8942 12254 2.054453 GTAGGCGTCGGTAACCCCT 61.054 63.158 0.00 0.00 39.56 4.79
8943 12255 1.305213 TAGGCGTCGGTAACCCCTT 60.305 57.895 0.00 0.00 37.37 3.95
8944 12256 1.322538 TAGGCGTCGGTAACCCCTTC 61.323 60.000 0.00 0.00 37.37 3.46
8945 12257 2.507769 GCGTCGGTAACCCCTTCG 60.508 66.667 0.00 0.00 0.00 3.79
8946 12258 2.964978 CGTCGGTAACCCCTTCGT 59.035 61.111 0.00 0.00 0.00 3.85
8947 12259 1.153958 CGTCGGTAACCCCTTCGTC 60.154 63.158 0.00 0.00 0.00 4.20
8948 12260 1.865788 CGTCGGTAACCCCTTCGTCA 61.866 60.000 0.00 0.00 0.00 4.35
8949 12261 0.533951 GTCGGTAACCCCTTCGTCAT 59.466 55.000 0.00 0.00 0.00 3.06
8950 12262 0.533491 TCGGTAACCCCTTCGTCATG 59.467 55.000 0.00 0.00 0.00 3.07
8951 12263 0.533491 CGGTAACCCCTTCGTCATGA 59.467 55.000 0.00 0.00 0.00 3.07
8952 12264 1.738030 CGGTAACCCCTTCGTCATGAC 60.738 57.143 16.21 16.21 0.00 3.06
8953 12265 1.276989 GGTAACCCCTTCGTCATGACA 59.723 52.381 24.93 9.94 0.00 3.58
8954 12266 2.093128 GGTAACCCCTTCGTCATGACAT 60.093 50.000 24.93 3.69 0.00 3.06
8955 12267 2.403252 AACCCCTTCGTCATGACATC 57.597 50.000 24.93 0.00 0.00 3.06
8956 12268 0.175760 ACCCCTTCGTCATGACATCG 59.824 55.000 24.93 11.96 0.00 3.84
8957 12269 0.530650 CCCCTTCGTCATGACATCGG 60.531 60.000 24.93 18.94 0.00 4.18
8958 12270 1.154205 CCCTTCGTCATGACATCGGC 61.154 60.000 24.93 0.00 0.00 5.54
8959 12271 0.460109 CCTTCGTCATGACATCGGCA 60.460 55.000 24.93 0.00 0.00 5.69
8960 12272 1.358877 CTTCGTCATGACATCGGCAA 58.641 50.000 24.93 6.86 0.00 4.52
8961 12273 1.731709 CTTCGTCATGACATCGGCAAA 59.268 47.619 24.93 6.70 0.00 3.68
8962 12274 1.075542 TCGTCATGACATCGGCAAAC 58.924 50.000 24.93 0.00 0.00 2.93
8963 12275 1.078709 CGTCATGACATCGGCAAACT 58.921 50.000 24.93 0.00 0.00 2.66
8964 12276 1.201954 CGTCATGACATCGGCAAACTG 60.202 52.381 24.93 0.83 0.00 3.16
8965 12277 0.804364 TCATGACATCGGCAAACTGC 59.196 50.000 0.00 0.00 44.08 4.40
8966 12278 0.806868 CATGACATCGGCAAACTGCT 59.193 50.000 0.00 0.00 44.28 4.24
8979 12291 2.743928 CTGCTGAGCGGTGGGAAC 60.744 66.667 4.80 0.00 0.00 3.62
8980 12292 3.535629 CTGCTGAGCGGTGGGAACA 62.536 63.158 4.80 0.00 38.70 3.18
8981 12293 2.045926 GCTGAGCGGTGGGAACAT 60.046 61.111 0.00 0.00 46.14 2.71
8982 12294 2.401766 GCTGAGCGGTGGGAACATG 61.402 63.158 0.00 0.00 46.14 3.21
8983 12295 1.296392 CTGAGCGGTGGGAACATGA 59.704 57.895 0.00 0.00 46.14 3.07
8984 12296 0.321564 CTGAGCGGTGGGAACATGAA 60.322 55.000 0.00 0.00 46.14 2.57
8985 12297 0.321564 TGAGCGGTGGGAACATGAAG 60.322 55.000 0.00 0.00 46.14 3.02
8986 12298 0.036388 GAGCGGTGGGAACATGAAGA 60.036 55.000 0.00 0.00 46.14 2.87
8987 12299 0.400213 AGCGGTGGGAACATGAAGAA 59.600 50.000 0.00 0.00 46.14 2.52
8988 12300 0.521735 GCGGTGGGAACATGAAGAAC 59.478 55.000 0.00 0.00 46.14 3.01
8989 12301 0.796312 CGGTGGGAACATGAAGAACG 59.204 55.000 0.00 0.00 46.14 3.95
8990 12302 0.521735 GGTGGGAACATGAAGAACGC 59.478 55.000 0.00 0.00 46.14 4.84
8991 12303 0.165944 GTGGGAACATGAAGAACGCG 59.834 55.000 3.53 3.53 46.14 6.01
8992 12304 0.953471 TGGGAACATGAAGAACGCGG 60.953 55.000 12.47 0.00 33.40 6.46
8993 12305 0.672401 GGGAACATGAAGAACGCGGA 60.672 55.000 12.47 0.00 0.00 5.54
8994 12306 0.442699 GGAACATGAAGAACGCGGAC 59.557 55.000 12.47 3.49 0.00 4.79
8996 12308 1.897398 AACATGAAGAACGCGGACGC 61.897 55.000 12.47 6.63 45.53 5.19
9022 12334 3.730761 GCCACCTGCTCTTGCACG 61.731 66.667 0.00 0.00 45.31 5.34
9023 12335 2.031012 CCACCTGCTCTTGCACGA 59.969 61.111 0.00 0.00 45.31 4.35
9024 12336 1.597854 CCACCTGCTCTTGCACGAA 60.598 57.895 0.00 0.00 45.31 3.85
9025 12337 1.572085 CCACCTGCTCTTGCACGAAG 61.572 60.000 0.00 0.00 45.31 3.79
9026 12338 0.882042 CACCTGCTCTTGCACGAAGT 60.882 55.000 0.00 0.00 45.31 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
572 592 1.389555 GGACAAGAATTTAGGCCGGG 58.610 55.000 2.18 0.00 0.00 5.73
579 599 5.185249 AGCTACTCTCACGGACAAGAATTTA 59.815 40.000 0.00 0.00 0.00 1.40
619 639 5.329399 TGGCAAACTGGGAATAGTACAATT 58.671 37.500 0.00 0.00 0.00 2.32
904 927 2.067605 TCAAGTGTGGTGGACCGGT 61.068 57.895 6.92 6.92 39.43 5.28
1075 1104 2.437180 CAGCCTCGCCATTGCTCA 60.437 61.111 0.00 0.00 31.77 4.26
1149 1178 2.801631 GGAGCGGGAGGAGGTGATG 61.802 68.421 0.00 0.00 0.00 3.07
1150 1179 2.444895 GGAGCGGGAGGAGGTGAT 60.445 66.667 0.00 0.00 0.00 3.06
1450 1491 1.352352 AGGGTAGCAACATCAGCAAGT 59.648 47.619 0.00 0.00 0.00 3.16
1460 1501 5.355350 TCGTACTACTAAGAAGGGTAGCAAC 59.645 44.000 0.00 0.00 39.01 4.17
1469 1520 8.635877 AATGAGCAAATCGTACTACTAAGAAG 57.364 34.615 0.00 0.00 0.00 2.85
1505 1556 5.337571 CGCTAAGATGATAAGGCTCCCATAA 60.338 44.000 0.00 0.00 0.00 1.90
1506 1557 4.160439 CGCTAAGATGATAAGGCTCCCATA 59.840 45.833 0.00 0.00 0.00 2.74
1507 1558 3.055530 CGCTAAGATGATAAGGCTCCCAT 60.056 47.826 0.00 0.00 0.00 4.00
1628 1688 0.741915 AACGGAAACACACGCCAATT 59.258 45.000 0.00 0.00 0.00 2.32
1640 1700 2.591311 GCGCGTGAGTGAACGGAAA 61.591 57.895 8.43 0.00 46.66 3.13
1655 1715 1.586154 AAATACAGTGGCAGGTGCGC 61.586 55.000 0.00 0.00 43.26 6.09
1685 1745 5.995282 ACAAAGTCCAAACATGTCTCGATTA 59.005 36.000 0.00 0.00 0.00 1.75
1721 1781 8.008513 ACCCACACAATACAGTATAAGACTAG 57.991 38.462 0.00 0.00 35.64 2.57
1739 1800 3.005367 ACGATCAAAATCCAAACCCACAC 59.995 43.478 0.00 0.00 0.00 3.82
1744 1805 4.237349 ACACACGATCAAAATCCAAACC 57.763 40.909 0.00 0.00 0.00 3.27
1767 1828 3.497103 TCAGATATCTGCAACCATGGG 57.503 47.619 25.27 0.00 43.46 4.00
1770 1831 5.563876 ACTGATCAGATATCTGCAACCAT 57.436 39.130 29.27 14.41 43.46 3.55
1785 1846 0.976641 AGCGGGTCTTCAACTGATCA 59.023 50.000 0.00 0.00 0.00 2.92
1863 1924 3.581332 GGTAAATCCCTGATATCCGTGGA 59.419 47.826 0.00 3.97 0.00 4.02
1993 2054 7.765819 TGACAGACATGAACATAAGGTAAGATG 59.234 37.037 0.00 0.00 0.00 2.90
2401 2464 3.509575 AGCTCACAAAACTTGGTTCACAA 59.490 39.130 0.00 0.00 37.55 3.33
2402 2465 3.088532 AGCTCACAAAACTTGGTTCACA 58.911 40.909 0.00 0.00 34.12 3.58
2403 2466 3.782889 AGCTCACAAAACTTGGTTCAC 57.217 42.857 0.00 0.00 34.12 3.18
2478 2542 4.986659 GTGTTAGCTACCAGAAAAGAACGA 59.013 41.667 0.00 0.00 0.00 3.85
2591 2655 2.742372 CGCCCAAGTTGGTCTCCG 60.742 66.667 20.54 12.87 35.17 4.63
2788 2852 5.707298 TCCTGAGTTGACAAATTCCTCAATC 59.293 40.000 7.42 2.78 32.23 2.67
3268 3334 5.661458 AGGATCTCACTATTTTACACACCG 58.339 41.667 0.00 0.00 0.00 4.94
3329 3395 8.035984 CCCTTTCTAACTAAATCGAAGAGTCTT 58.964 37.037 4.68 4.68 43.63 3.01
3434 3500 6.486657 TGCCTGAGTTAGCAATTAACATATCC 59.513 38.462 0.00 0.00 43.38 2.59
3450 3516 0.401738 TAAGCTTGGCTGCCTGAGTT 59.598 50.000 21.03 12.60 39.62 3.01
3456 3522 0.609131 TCCAACTAAGCTTGGCTGCC 60.609 55.000 12.87 12.87 40.66 4.85
3461 3527 5.774498 AAAGAAACTCCAACTAAGCTTGG 57.226 39.130 9.86 9.13 42.04 3.61
3644 3710 7.394016 TCTCTTTCAGCATTGTCATTACCTAA 58.606 34.615 0.00 0.00 0.00 2.69
3739 3805 1.679139 CAGTCTGCACCCAGTTTTCA 58.321 50.000 0.00 0.00 40.09 2.69
3796 3862 1.134965 AGAGTCGACTAGTGCCATTGC 60.135 52.381 20.09 1.42 38.26 3.56
3854 3920 4.524316 TTGATGGAAGAGTGCCATTTTG 57.476 40.909 0.00 0.00 45.81 2.44
3897 3963 5.716228 AGATGGTAATGGCTGAAAATTGACA 59.284 36.000 0.00 0.00 0.00 3.58
3999 4065 8.482943 AGTGTATATGTGTAGGTTTGAAGCATA 58.517 33.333 0.00 0.00 0.00 3.14
4067 4133 3.896888 CTGTTCAGCCTAGAGATGGAGAT 59.103 47.826 0.00 0.00 0.00 2.75
4109 4175 7.959175 TGGCTATTGTATAGTTTCCGATAACT 58.041 34.615 7.20 7.20 41.13 2.24
4287 4356 0.606604 GCGGTACCACTCCTCTTTCA 59.393 55.000 13.54 0.00 0.00 2.69
4323 4392 5.600669 AGGATGAACCCTTTACTCCTTTT 57.399 39.130 0.00 0.00 40.05 2.27
4324 4393 5.600669 AAGGATGAACCCTTTACTCCTTT 57.399 39.130 0.00 0.00 43.68 3.11
4341 4410 7.420330 GCCCTTAAGTAAATCAGAGGTAAGGAT 60.420 40.741 7.90 0.00 38.84 3.24
4435 4504 6.808321 AGCTGACACAAACTAAGGGATATA 57.192 37.500 0.00 0.00 0.00 0.86
4449 4518 1.127567 AACTGGCCCTAGCTGACACA 61.128 55.000 0.00 0.00 39.73 3.72
4472 4541 3.671971 CGCTGACAGTCCACAAAACAAAA 60.672 43.478 3.99 0.00 0.00 2.44
4501 4570 5.389859 TTGCAACATTTTAGGATCAGGTG 57.610 39.130 0.00 0.00 0.00 4.00
4502 4571 6.610075 AATTGCAACATTTTAGGATCAGGT 57.390 33.333 0.00 0.00 0.00 4.00
4615 7669 7.448748 AACAAGGAGTTTATATGTGTTGACC 57.551 36.000 0.00 0.00 37.03 4.02
4853 7907 5.824624 ACCGATTGATTGCTGAGATAACATT 59.175 36.000 0.00 0.00 0.00 2.71
4874 7928 3.189080 TCAAATTTGCATCTGAGACACCG 59.811 43.478 13.54 0.00 0.00 4.94
4996 8050 6.263842 TCACTGCATTGAAACAGAGAAATCTT 59.736 34.615 3.97 0.00 37.35 2.40
5029 8083 3.071023 AGCTACACCAACTGCTTCTACAA 59.929 43.478 0.00 0.00 30.96 2.41
5222 8280 2.550830 TGAAACCTGAGGCAGAACTC 57.449 50.000 0.00 0.00 37.99 3.01
5232 8290 3.084039 CTGCTGCCTAAATGAAACCTGA 58.916 45.455 0.00 0.00 0.00 3.86
5347 8405 3.881688 GCAACATCAGACATGGAAGCTAT 59.118 43.478 0.00 0.00 0.00 2.97
5495 8617 4.502604 GCACTGTGGAAGACCTGTTACTAA 60.503 45.833 10.21 0.00 37.04 2.24
5511 8633 4.867047 AGAGAACATAGAATTCGCACTGTG 59.133 41.667 2.76 2.76 0.00 3.66
5512 8634 5.078411 AGAGAACATAGAATTCGCACTGT 57.922 39.130 0.00 0.08 0.00 3.55
5559 8681 6.829298 TCCAAACTGAGATCGAGTAGAATAGT 59.171 38.462 1.34 0.00 0.00 2.12
5734 8859 2.359900 CTTAAAGGGCGTTGATCAGCT 58.640 47.619 8.01 0.00 0.00 4.24
5853 8979 5.579511 CCGACGGTATCAGACTATTTTTGTT 59.420 40.000 5.48 0.00 0.00 2.83
6106 9232 6.428159 CCATAGCAGACCTAATAAACCACATC 59.572 42.308 0.00 0.00 0.00 3.06
6189 9315 6.496565 CAGAGAATAGATGGTCCTGGACTTAT 59.503 42.308 25.01 18.99 32.47 1.73
6234 9360 5.241506 TGGTTTCATGCTTCCTTTCTAACAG 59.758 40.000 0.00 0.00 0.00 3.16
6236 9362 5.705609 TGGTTTCATGCTTCCTTTCTAAC 57.294 39.130 0.00 0.00 0.00 2.34
6245 9371 4.931601 GGAAGGAAATTGGTTTCATGCTTC 59.068 41.667 3.64 6.56 44.42 3.86
6255 9381 3.399305 AGAGTTGAGGGAAGGAAATTGGT 59.601 43.478 0.00 0.00 0.00 3.67
6266 9392 3.708236 ATTAGGCCTAGAGTTGAGGGA 57.292 47.619 13.36 0.00 34.35 4.20
6317 9443 0.180406 GGCATGGTTGTCCGGTATCT 59.820 55.000 0.00 0.00 36.30 1.98
6318 9444 0.818040 GGGCATGGTTGTCCGGTATC 60.818 60.000 0.00 0.00 38.00 2.24
6358 9484 1.958579 CCATCGCCATGTCATCCAAAT 59.041 47.619 0.00 0.00 0.00 2.32
6375 9501 1.180029 GCCATGTGTGAGAAAGCCAT 58.820 50.000 0.00 0.00 0.00 4.40
6470 9605 9.462606 CCTAGACTTTATGGTTGTTCCTATTTT 57.537 33.333 0.00 0.00 37.07 1.82
6482 9617 2.488836 CCACCCCCTAGACTTTATGGT 58.511 52.381 0.00 0.00 0.00 3.55
6549 9685 9.977762 CACTTCTTTTCAAATTTTCCTTCTTTG 57.022 29.630 0.00 0.00 0.00 2.77
6563 9699 1.952990 TGCATCCGCACTTCTTTTCAA 59.047 42.857 0.00 0.00 45.36 2.69
6564 9700 1.603456 TGCATCCGCACTTCTTTTCA 58.397 45.000 0.00 0.00 45.36 2.69
6580 9716 5.450592 TGATGTTGCTTTCTTTGTATGCA 57.549 34.783 0.00 0.00 0.00 3.96
6624 9760 7.859325 ACAATAAATACAGCGGATAACAGTT 57.141 32.000 0.00 0.00 0.00 3.16
6834 9975 8.450964 CAATACCAGAATACCTTAACAACAGTG 58.549 37.037 0.00 0.00 0.00 3.66
6839 9980 7.630082 AGAGCAATACCAGAATACCTTAACAA 58.370 34.615 0.00 0.00 0.00 2.83
6841 9982 9.780186 AATAGAGCAATACCAGAATACCTTAAC 57.220 33.333 0.00 0.00 0.00 2.01
6875 10016 3.521560 GAGTCAAAGTCACACACAGACA 58.478 45.455 0.00 0.00 38.46 3.41
6887 10030 6.919775 ATAGACAGTACAAGGAGTCAAAGT 57.080 37.500 0.00 0.00 33.56 2.66
6917 10068 3.282021 CAGGCCTTGTAGTATTGCACAT 58.718 45.455 0.00 0.00 0.00 3.21
6934 10085 3.249559 GCTGTTATGACTTATGAGCAGGC 59.750 47.826 0.00 0.00 0.00 4.85
7056 10207 4.202441 ACATGGCTGCTTTATCTCGAAAT 58.798 39.130 0.00 0.00 0.00 2.17
7108 10259 8.511321 CGAAGAAATATGAGCTACTCAGTATCT 58.489 37.037 3.42 0.00 44.08 1.98
7328 10479 6.741358 GGCAGACGTTTGTTCATTAAATACTC 59.259 38.462 8.00 0.00 0.00 2.59
7333 10485 4.902443 TGGCAGACGTTTGTTCATTAAA 57.098 36.364 8.00 0.00 0.00 1.52
7373 10526 9.457110 CTAGACTTTAAGTACATGCACAGATAG 57.543 37.037 0.00 0.00 0.00 2.08
7374 10527 9.185680 TCTAGACTTTAAGTACATGCACAGATA 57.814 33.333 0.00 0.00 0.00 1.98
7375 10528 8.067751 TCTAGACTTTAAGTACATGCACAGAT 57.932 34.615 0.00 0.00 0.00 2.90
7392 10545 9.890629 TGTTGCTATTCAATACATTCTAGACTT 57.109 29.630 0.00 0.00 36.99 3.01
7464 10723 6.208007 ACTTCATCAGAATGTCAAGCATTGAA 59.792 34.615 0.00 0.00 46.90 2.69
7588 10847 2.144482 GCAGCTTGCAACAAATGTCT 57.856 45.000 0.00 0.00 44.26 3.41
7624 10883 7.223584 TCTCAATCATGTAGTTCCACTCAAAA 58.776 34.615 0.00 0.00 0.00 2.44
7636 10895 4.872691 GGTGGTGAACTCTCAATCATGTAG 59.127 45.833 0.00 0.00 31.88 2.74
7663 10952 5.335113 GCATTATTCAGCACACAGTCAGAAA 60.335 40.000 0.00 0.00 0.00 2.52
7670 10959 2.751259 ACCTGCATTATTCAGCACACAG 59.249 45.455 0.00 0.00 36.62 3.66
7719 11008 2.124403 ATCTCCGGTAGCGTCGGT 60.124 61.111 13.99 1.19 46.82 4.69
7780 11069 0.474854 TCCTGTAGCACCCCCTTCAA 60.475 55.000 0.00 0.00 0.00 2.69
7925 11214 5.220605 CGTAAACTTTAGCTATTCACTGGCC 60.221 44.000 0.00 0.00 30.08 5.36
7991 11280 3.009695 TGAATTTAGGTAGGGTGGGTGTG 59.990 47.826 0.00 0.00 0.00 3.82
8082 11371 3.749088 TCGCATTTTCAGTATGTCGGTTT 59.251 39.130 0.00 0.00 37.40 3.27
8293 11589 2.159599 GCGAAAATCACTGAAGCTCCTG 60.160 50.000 0.00 0.00 0.00 3.86
8385 11689 5.438761 AGTTTTGCTCAACATCCTACAAC 57.561 39.130 2.06 0.00 0.00 3.32
8392 11696 4.305989 TGTGGAAGTTTTGCTCAACATC 57.694 40.909 2.06 0.00 0.00 3.06
8448 11757 5.676552 TGGCTACAAGACAAAGTTGAGTTA 58.323 37.500 0.00 0.00 23.92 2.24
8510 11822 4.998051 AGCCAAGGACCTTTATTTTCTCA 58.002 39.130 3.21 0.00 0.00 3.27
8513 11825 7.611770 ACATTTAGCCAAGGACCTTTATTTTC 58.388 34.615 3.21 0.00 0.00 2.29
8535 11847 3.592898 TGTTCTACACGCATGAGACAT 57.407 42.857 2.50 0.00 0.00 3.06
8536 11848 3.057019 GTTGTTCTACACGCATGAGACA 58.943 45.455 2.50 0.00 0.00 3.41
8537 11849 2.412089 GGTTGTTCTACACGCATGAGAC 59.588 50.000 2.50 0.00 0.00 3.36
8538 11850 2.036604 TGGTTGTTCTACACGCATGAGA 59.963 45.455 2.50 0.00 0.00 3.27
8539 11851 2.412870 TGGTTGTTCTACACGCATGAG 58.587 47.619 0.00 0.00 0.00 2.90
8540 11852 2.535012 TGGTTGTTCTACACGCATGA 57.465 45.000 0.00 0.00 0.00 3.07
8541 11853 3.058293 ACAATGGTTGTTCTACACGCATG 60.058 43.478 0.00 0.00 42.22 4.06
8542 11854 3.058293 CACAATGGTTGTTCTACACGCAT 60.058 43.478 0.00 0.00 43.23 4.73
8543 11855 2.289274 CACAATGGTTGTTCTACACGCA 59.711 45.455 0.00 0.00 43.23 5.24
8544 11856 2.289547 ACACAATGGTTGTTCTACACGC 59.710 45.455 0.00 0.00 43.23 5.34
8545 11857 4.034626 TCAACACAATGGTTGTTCTACACG 59.965 41.667 12.09 0.00 46.36 4.49
8546 11858 5.493133 TCAACACAATGGTTGTTCTACAC 57.507 39.130 12.09 0.00 46.36 2.90
8547 11859 5.067153 CCTTCAACACAATGGTTGTTCTACA 59.933 40.000 12.09 0.00 46.36 2.74
8548 11860 5.519722 CCTTCAACACAATGGTTGTTCTAC 58.480 41.667 12.09 0.00 46.36 2.59
8549 11861 4.037446 GCCTTCAACACAATGGTTGTTCTA 59.963 41.667 12.09 0.00 46.36 2.10
8550 11862 3.181476 GCCTTCAACACAATGGTTGTTCT 60.181 43.478 12.09 0.00 46.36 3.01
8551 11863 3.123050 GCCTTCAACACAATGGTTGTTC 58.877 45.455 12.09 1.35 46.36 3.18
8552 11864 2.499289 TGCCTTCAACACAATGGTTGTT 59.501 40.909 12.09 0.11 46.36 2.83
8553 11865 2.106566 TGCCTTCAACACAATGGTTGT 58.893 42.857 12.09 0.00 46.36 3.32
8554 11866 6.083794 GCATTGCCTTCAACACAATGGTTG 62.084 45.833 14.65 7.85 46.82 3.77
8555 11867 3.731089 CATTGCCTTCAACACAATGGTT 58.269 40.909 6.98 0.00 44.35 3.67
8556 11868 2.548493 GCATTGCCTTCAACACAATGGT 60.548 45.455 14.65 0.00 46.82 3.55
8557 11869 2.070783 GCATTGCCTTCAACACAATGG 58.929 47.619 14.65 0.45 46.82 3.16
8559 11871 3.132925 GTTGCATTGCCTTCAACACAAT 58.867 40.909 6.12 0.00 39.69 2.71
8560 11872 2.168106 AGTTGCATTGCCTTCAACACAA 59.832 40.909 6.12 0.00 41.67 3.33
8561 11873 1.755959 AGTTGCATTGCCTTCAACACA 59.244 42.857 6.12 0.00 41.67 3.72
8562 11874 2.035066 AGAGTTGCATTGCCTTCAACAC 59.965 45.455 6.12 2.87 41.67 3.32
8563 11875 2.309613 AGAGTTGCATTGCCTTCAACA 58.690 42.857 6.12 0.00 41.67 3.33
8564 11876 3.054878 CAAGAGTTGCATTGCCTTCAAC 58.945 45.455 6.12 3.90 40.08 3.18
8565 11877 2.957680 TCAAGAGTTGCATTGCCTTCAA 59.042 40.909 6.12 0.00 36.51 2.69
8566 11878 2.585330 TCAAGAGTTGCATTGCCTTCA 58.415 42.857 6.12 0.00 0.00 3.02
8567 11879 3.057033 ACATCAAGAGTTGCATTGCCTTC 60.057 43.478 6.12 1.34 0.00 3.46
8568 11880 2.895404 ACATCAAGAGTTGCATTGCCTT 59.105 40.909 6.12 0.00 0.00 4.35
8569 11881 2.522185 ACATCAAGAGTTGCATTGCCT 58.478 42.857 6.12 0.00 0.00 4.75
8570 11882 4.644103 ATACATCAAGAGTTGCATTGCC 57.356 40.909 6.12 0.00 0.00 4.52
8571 11883 5.643664 TCAATACATCAAGAGTTGCATTGC 58.356 37.500 0.46 0.46 0.00 3.56
8572 11884 6.631636 CGATCAATACATCAAGAGTTGCATTG 59.368 38.462 0.00 0.00 0.00 2.82
8573 11885 6.238566 CCGATCAATACATCAAGAGTTGCATT 60.239 38.462 0.00 0.00 0.00 3.56
8574 11886 5.237996 CCGATCAATACATCAAGAGTTGCAT 59.762 40.000 0.00 0.00 0.00 3.96
8575 11887 4.571984 CCGATCAATACATCAAGAGTTGCA 59.428 41.667 0.00 0.00 0.00 4.08
8576 11888 4.024556 CCCGATCAATACATCAAGAGTTGC 60.025 45.833 0.00 0.00 0.00 4.17
8577 11889 5.007039 CACCCGATCAATACATCAAGAGTTG 59.993 44.000 0.00 0.00 0.00 3.16
8578 11890 5.118990 CACCCGATCAATACATCAAGAGTT 58.881 41.667 0.00 0.00 0.00 3.01
8579 11891 4.697514 CACCCGATCAATACATCAAGAGT 58.302 43.478 0.00 0.00 0.00 3.24
8580 11892 3.496130 GCACCCGATCAATACATCAAGAG 59.504 47.826 0.00 0.00 0.00 2.85
8581 11893 3.118445 TGCACCCGATCAATACATCAAGA 60.118 43.478 0.00 0.00 0.00 3.02
8582 11894 3.002656 GTGCACCCGATCAATACATCAAG 59.997 47.826 5.22 0.00 0.00 3.02
8583 11895 2.942376 GTGCACCCGATCAATACATCAA 59.058 45.455 5.22 0.00 0.00 2.57
8584 11896 2.560504 GTGCACCCGATCAATACATCA 58.439 47.619 5.22 0.00 0.00 3.07
8585 11897 1.526887 CGTGCACCCGATCAATACATC 59.473 52.381 12.15 0.00 0.00 3.06
8586 11898 1.138069 TCGTGCACCCGATCAATACAT 59.862 47.619 12.15 0.00 30.63 2.29
8587 11899 0.533032 TCGTGCACCCGATCAATACA 59.467 50.000 12.15 0.00 30.63 2.29
8588 11900 1.526887 CATCGTGCACCCGATCAATAC 59.473 52.381 12.15 0.00 45.25 1.89
8589 11901 1.864565 CATCGTGCACCCGATCAATA 58.135 50.000 12.15 0.00 45.25 1.90
8590 11902 1.439353 GCATCGTGCACCCGATCAAT 61.439 55.000 12.15 0.00 45.25 2.57
8591 11903 2.106074 GCATCGTGCACCCGATCAA 61.106 57.895 12.15 0.00 45.25 2.57
8592 11904 2.511373 GCATCGTGCACCCGATCA 60.511 61.111 12.15 0.00 45.25 2.92
8604 11916 5.541098 TGTACCTAGATATACGTGCATCG 57.459 43.478 0.00 7.07 46.00 3.84
8605 11917 6.323266 CCTTGTACCTAGATATACGTGCATC 58.677 44.000 0.00 0.14 0.00 3.91
8606 11918 5.185249 CCCTTGTACCTAGATATACGTGCAT 59.815 44.000 0.00 0.00 0.00 3.96
8607 11919 4.521639 CCCTTGTACCTAGATATACGTGCA 59.478 45.833 0.00 0.00 0.00 4.57
8608 11920 4.617762 GCCCTTGTACCTAGATATACGTGC 60.618 50.000 0.00 0.00 0.00 5.34
8609 11921 4.521639 TGCCCTTGTACCTAGATATACGTG 59.478 45.833 0.00 0.00 0.00 4.49
8610 11922 4.733165 TGCCCTTGTACCTAGATATACGT 58.267 43.478 0.00 0.00 0.00 3.57
8611 11923 4.380655 GCTGCCCTTGTACCTAGATATACG 60.381 50.000 0.00 0.00 0.00 3.06
8612 11924 4.081586 GGCTGCCCTTGTACCTAGATATAC 60.082 50.000 7.66 0.00 0.00 1.47
8613 11925 4.094476 GGCTGCCCTTGTACCTAGATATA 58.906 47.826 7.66 0.00 0.00 0.86
8614 11926 2.907042 GGCTGCCCTTGTACCTAGATAT 59.093 50.000 7.66 0.00 0.00 1.63
8615 11927 2.326428 GGCTGCCCTTGTACCTAGATA 58.674 52.381 7.66 0.00 0.00 1.98
8616 11928 1.132500 GGCTGCCCTTGTACCTAGAT 58.868 55.000 7.66 0.00 0.00 1.98
8617 11929 0.981277 GGGCTGCCCTTGTACCTAGA 60.981 60.000 30.42 0.00 41.34 2.43
8618 11930 1.527370 GGGCTGCCCTTGTACCTAG 59.473 63.158 30.42 0.00 41.34 3.02
8619 11931 3.735725 GGGCTGCCCTTGTACCTA 58.264 61.111 30.42 0.00 41.34 3.08
8633 11945 2.251818 TGTATAGATGAGGCTGAGGGC 58.748 52.381 0.00 0.00 40.90 5.19
8634 11946 3.260380 CCTTGTATAGATGAGGCTGAGGG 59.740 52.174 0.00 0.00 0.00 4.30
8635 11947 4.155709 TCCTTGTATAGATGAGGCTGAGG 58.844 47.826 0.00 0.00 0.00 3.86
8636 11948 5.798125 TTCCTTGTATAGATGAGGCTGAG 57.202 43.478 0.00 0.00 0.00 3.35
8637 11949 5.663106 AGTTTCCTTGTATAGATGAGGCTGA 59.337 40.000 0.00 0.00 0.00 4.26
8638 11950 5.923204 AGTTTCCTTGTATAGATGAGGCTG 58.077 41.667 0.00 0.00 0.00 4.85
8639 11951 7.069986 TCTAGTTTCCTTGTATAGATGAGGCT 58.930 38.462 0.00 0.00 0.00 4.58
8640 11952 7.291411 TCTAGTTTCCTTGTATAGATGAGGC 57.709 40.000 0.00 0.00 0.00 4.70
8641 11953 7.524698 GCCTCTAGTTTCCTTGTATAGATGAGG 60.525 44.444 0.00 0.00 38.19 3.86
8642 11954 7.375053 GCCTCTAGTTTCCTTGTATAGATGAG 58.625 42.308 0.00 0.00 0.00 2.90
8643 11955 6.016192 CGCCTCTAGTTTCCTTGTATAGATGA 60.016 42.308 0.00 0.00 0.00 2.92
8644 11956 6.153067 CGCCTCTAGTTTCCTTGTATAGATG 58.847 44.000 0.00 0.00 0.00 2.90
8645 11957 5.244178 CCGCCTCTAGTTTCCTTGTATAGAT 59.756 44.000 0.00 0.00 0.00 1.98
8646 11958 4.583489 CCGCCTCTAGTTTCCTTGTATAGA 59.417 45.833 0.00 0.00 0.00 1.98
8647 11959 4.262079 CCCGCCTCTAGTTTCCTTGTATAG 60.262 50.000 0.00 0.00 0.00 1.31
8648 11960 3.640029 CCCGCCTCTAGTTTCCTTGTATA 59.360 47.826 0.00 0.00 0.00 1.47
8649 11961 2.434702 CCCGCCTCTAGTTTCCTTGTAT 59.565 50.000 0.00 0.00 0.00 2.29
8650 11962 1.829222 CCCGCCTCTAGTTTCCTTGTA 59.171 52.381 0.00 0.00 0.00 2.41
8651 11963 0.613777 CCCGCCTCTAGTTTCCTTGT 59.386 55.000 0.00 0.00 0.00 3.16
8652 11964 0.107654 CCCCGCCTCTAGTTTCCTTG 60.108 60.000 0.00 0.00 0.00 3.61
8653 11965 1.911702 GCCCCGCCTCTAGTTTCCTT 61.912 60.000 0.00 0.00 0.00 3.36
8654 11966 2.368011 GCCCCGCCTCTAGTTTCCT 61.368 63.158 0.00 0.00 0.00 3.36
8655 11967 2.189784 GCCCCGCCTCTAGTTTCC 59.810 66.667 0.00 0.00 0.00 3.13
8656 11968 2.189784 GGCCCCGCCTCTAGTTTC 59.810 66.667 0.00 0.00 46.69 2.78
8667 11979 0.903454 ATAATCTCCTACCGGCCCCG 60.903 60.000 0.00 0.00 39.44 5.73
8668 11980 0.903236 GATAATCTCCTACCGGCCCC 59.097 60.000 0.00 0.00 0.00 5.80
8669 11981 0.903236 GGATAATCTCCTACCGGCCC 59.097 60.000 0.00 0.00 41.29 5.80
8678 11990 7.547370 GTGCATGTATCTGTTAGGATAATCTCC 59.453 40.741 0.00 0.00 45.33 3.71
8679 11991 8.090831 TGTGCATGTATCTGTTAGGATAATCTC 58.909 37.037 0.00 0.00 31.10 2.75
8680 11992 7.966812 TGTGCATGTATCTGTTAGGATAATCT 58.033 34.615 0.00 0.00 31.10 2.40
8681 11993 8.607441 TTGTGCATGTATCTGTTAGGATAATC 57.393 34.615 0.00 0.00 31.10 1.75
8682 11994 8.978874 TTTGTGCATGTATCTGTTAGGATAAT 57.021 30.769 0.00 0.00 31.10 1.28
8683 11995 8.978874 ATTTGTGCATGTATCTGTTAGGATAA 57.021 30.769 0.00 0.00 31.10 1.75
8685 11997 9.006839 CATATTTGTGCATGTATCTGTTAGGAT 57.993 33.333 0.00 0.00 0.00 3.24
8686 11998 7.992608 ACATATTTGTGCATGTATCTGTTAGGA 59.007 33.333 0.00 0.00 33.85 2.94
8687 11999 8.158169 ACATATTTGTGCATGTATCTGTTAGG 57.842 34.615 0.00 0.00 33.85 2.69
8688 12000 9.655769 GAACATATTTGTGCATGTATCTGTTAG 57.344 33.333 0.00 0.00 35.83 2.34
8689 12001 9.171877 TGAACATATTTGTGCATGTATCTGTTA 57.828 29.630 0.00 0.00 36.42 2.41
8690 12002 8.054152 TGAACATATTTGTGCATGTATCTGTT 57.946 30.769 0.00 0.00 36.42 3.16
8691 12003 7.628769 TGAACATATTTGTGCATGTATCTGT 57.371 32.000 0.00 0.00 36.42 3.41
8692 12004 7.969508 TGTTGAACATATTTGTGCATGTATCTG 59.030 33.333 0.00 0.00 41.18 2.90
8693 12005 7.970061 GTGTTGAACATATTTGTGCATGTATCT 59.030 33.333 0.00 0.00 41.18 1.98
8694 12006 7.220683 GGTGTTGAACATATTTGTGCATGTATC 59.779 37.037 0.00 0.00 41.18 2.24
8695 12007 7.035004 GGTGTTGAACATATTTGTGCATGTAT 58.965 34.615 0.00 0.00 41.18 2.29
8696 12008 6.385843 GGTGTTGAACATATTTGTGCATGTA 58.614 36.000 0.00 0.00 41.18 2.29
8697 12009 5.229423 GGTGTTGAACATATTTGTGCATGT 58.771 37.500 0.00 0.00 41.18 3.21
8698 12010 4.626604 GGGTGTTGAACATATTTGTGCATG 59.373 41.667 0.00 0.00 41.18 4.06
8699 12011 4.322650 GGGGTGTTGAACATATTTGTGCAT 60.323 41.667 0.00 0.00 41.18 3.96
8700 12012 3.006323 GGGGTGTTGAACATATTTGTGCA 59.994 43.478 0.00 0.00 39.78 4.57
8701 12013 3.584834 GGGGTGTTGAACATATTTGTGC 58.415 45.455 0.00 0.00 35.83 4.57
8702 12014 4.186856 GGGGGTGTTGAACATATTTGTG 57.813 45.455 0.00 0.00 35.83 3.33
8870 12182 2.101575 TGACGTATCGACTGCGCC 59.898 61.111 4.18 0.00 36.29 6.53
8871 12183 2.222217 GGTGACGTATCGACTGCGC 61.222 63.158 0.00 0.00 36.29 6.09
8872 12184 0.861866 CTGGTGACGTATCGACTGCG 60.862 60.000 0.00 0.00 39.08 5.18
8873 12185 0.170561 ACTGGTGACGTATCGACTGC 59.829 55.000 0.00 0.00 0.00 4.40
8874 12186 1.467342 TCACTGGTGACGTATCGACTG 59.533 52.381 0.00 0.00 34.14 3.51
8875 12187 1.817357 TCACTGGTGACGTATCGACT 58.183 50.000 0.00 0.00 34.14 4.18
8885 12197 1.202348 CAGTCTATGCGTCACTGGTGA 59.798 52.381 9.26 0.00 34.96 4.02
8886 12198 1.633561 CAGTCTATGCGTCACTGGTG 58.366 55.000 9.26 0.00 34.96 4.17
8889 12201 1.469940 GGTCCAGTCTATGCGTCACTG 60.470 57.143 9.94 9.94 37.81 3.66
8890 12202 0.818296 GGTCCAGTCTATGCGTCACT 59.182 55.000 0.00 0.00 0.00 3.41
8891 12203 0.525668 CGGTCCAGTCTATGCGTCAC 60.526 60.000 0.00 0.00 0.00 3.67
8892 12204 1.663379 CCGGTCCAGTCTATGCGTCA 61.663 60.000 0.00 0.00 0.00 4.35
8893 12205 1.065928 CCGGTCCAGTCTATGCGTC 59.934 63.158 0.00 0.00 0.00 5.19
8894 12206 0.968901 TTCCGGTCCAGTCTATGCGT 60.969 55.000 0.00 0.00 0.00 5.24
8895 12207 0.527817 GTTCCGGTCCAGTCTATGCG 60.528 60.000 0.00 0.00 0.00 4.73
8896 12208 0.824759 AGTTCCGGTCCAGTCTATGC 59.175 55.000 0.00 0.00 0.00 3.14
8897 12209 1.409427 GGAGTTCCGGTCCAGTCTATG 59.591 57.143 0.00 0.00 33.84 2.23
8898 12210 1.288335 AGGAGTTCCGGTCCAGTCTAT 59.712 52.381 11.86 0.00 42.08 1.98
8899 12211 0.702902 AGGAGTTCCGGTCCAGTCTA 59.297 55.000 11.86 0.00 42.08 2.59
8900 12212 0.612453 GAGGAGTTCCGGTCCAGTCT 60.612 60.000 11.86 0.00 42.08 3.24
8901 12213 0.898789 TGAGGAGTTCCGGTCCAGTC 60.899 60.000 11.86 5.10 42.08 3.51
8902 12214 0.471211 TTGAGGAGTTCCGGTCCAGT 60.471 55.000 11.86 0.00 42.08 4.00
8903 12215 0.685097 TTTGAGGAGTTCCGGTCCAG 59.315 55.000 11.86 0.00 42.08 3.86
8904 12216 1.003118 CATTTGAGGAGTTCCGGTCCA 59.997 52.381 11.86 0.00 42.08 4.02
8905 12217 1.003233 ACATTTGAGGAGTTCCGGTCC 59.997 52.381 0.00 0.22 42.08 4.46
8906 12218 2.474410 ACATTTGAGGAGTTCCGGTC 57.526 50.000 0.00 0.00 42.08 4.79
8907 12219 2.236395 CCTACATTTGAGGAGTTCCGGT 59.764 50.000 0.00 0.00 42.08 5.28
8908 12220 2.906354 CCTACATTTGAGGAGTTCCGG 58.094 52.381 0.00 0.00 42.08 5.14
8909 12221 2.280628 GCCTACATTTGAGGAGTTCCG 58.719 52.381 0.00 0.00 42.08 4.30
8910 12222 2.280628 CGCCTACATTTGAGGAGTTCC 58.719 52.381 0.00 0.00 35.99 3.62
8911 12223 2.930682 GACGCCTACATTTGAGGAGTTC 59.069 50.000 0.00 0.00 45.85 3.01
8912 12224 2.674177 CGACGCCTACATTTGAGGAGTT 60.674 50.000 0.00 0.00 45.85 3.01
8914 12226 1.560923 CGACGCCTACATTTGAGGAG 58.439 55.000 0.00 0.00 39.58 3.69
8915 12227 0.174845 CCGACGCCTACATTTGAGGA 59.825 55.000 0.00 0.00 35.99 3.71
8916 12228 0.108329 ACCGACGCCTACATTTGAGG 60.108 55.000 0.00 0.00 37.12 3.86
8917 12229 2.572191 TACCGACGCCTACATTTGAG 57.428 50.000 0.00 0.00 0.00 3.02
8918 12230 2.609350 GTTACCGACGCCTACATTTGA 58.391 47.619 0.00 0.00 0.00 2.69
8919 12231 1.662122 GGTTACCGACGCCTACATTTG 59.338 52.381 0.00 0.00 0.00 2.32
8920 12232 1.405933 GGGTTACCGACGCCTACATTT 60.406 52.381 0.00 0.00 35.30 2.32
8921 12233 0.176449 GGGTTACCGACGCCTACATT 59.824 55.000 0.00 0.00 35.30 2.71
8922 12234 1.818555 GGGTTACCGACGCCTACAT 59.181 57.895 0.00 0.00 35.30 2.29
8923 12235 3.287445 GGGTTACCGACGCCTACA 58.713 61.111 0.00 0.00 35.30 2.74
8928 12240 2.507769 CGAAGGGGTTACCGACGC 60.508 66.667 0.00 0.00 46.96 5.19
8929 12241 1.153958 GACGAAGGGGTTACCGACG 60.154 63.158 0.00 1.22 46.96 5.12
8930 12242 0.533951 ATGACGAAGGGGTTACCGAC 59.466 55.000 0.00 0.00 46.96 4.79
8931 12243 0.533491 CATGACGAAGGGGTTACCGA 59.467 55.000 0.00 0.00 46.96 4.69
8932 12244 0.533491 TCATGACGAAGGGGTTACCG 59.467 55.000 0.00 0.00 46.96 4.02
8933 12245 1.276989 TGTCATGACGAAGGGGTTACC 59.723 52.381 20.54 0.00 40.67 2.85
8934 12246 2.754946 TGTCATGACGAAGGGGTTAC 57.245 50.000 20.54 0.00 0.00 2.50
8935 12247 2.159156 CGATGTCATGACGAAGGGGTTA 60.159 50.000 20.54 0.20 0.00 2.85
8936 12248 1.405526 CGATGTCATGACGAAGGGGTT 60.406 52.381 20.54 0.00 0.00 4.11
8937 12249 0.175760 CGATGTCATGACGAAGGGGT 59.824 55.000 20.54 1.05 0.00 4.95
8938 12250 0.530650 CCGATGTCATGACGAAGGGG 60.531 60.000 20.54 12.86 0.00 4.79
8939 12251 1.154205 GCCGATGTCATGACGAAGGG 61.154 60.000 24.90 20.82 0.00 3.95
8940 12252 0.460109 TGCCGATGTCATGACGAAGG 60.460 55.000 20.54 21.21 0.00 3.46
8941 12253 1.358877 TTGCCGATGTCATGACGAAG 58.641 50.000 20.54 13.16 0.00 3.79
8942 12254 1.463056 GTTTGCCGATGTCATGACGAA 59.537 47.619 20.54 4.80 0.00 3.85
8943 12255 1.075542 GTTTGCCGATGTCATGACGA 58.924 50.000 20.54 10.47 0.00 4.20
8944 12256 1.078709 AGTTTGCCGATGTCATGACG 58.921 50.000 20.54 9.18 0.00 4.35
8945 12257 1.466360 GCAGTTTGCCGATGTCATGAC 60.466 52.381 19.27 19.27 37.42 3.06
8946 12258 0.804364 GCAGTTTGCCGATGTCATGA 59.196 50.000 0.00 0.00 37.42 3.07
8947 12259 0.806868 AGCAGTTTGCCGATGTCATG 59.193 50.000 0.00 0.00 46.52 3.07
8948 12260 0.806868 CAGCAGTTTGCCGATGTCAT 59.193 50.000 0.00 0.00 46.52 3.06
8949 12261 0.250252 TCAGCAGTTTGCCGATGTCA 60.250 50.000 0.00 0.00 46.52 3.58
8950 12262 0.445436 CTCAGCAGTTTGCCGATGTC 59.555 55.000 0.00 0.00 46.52 3.06
8951 12263 1.580845 GCTCAGCAGTTTGCCGATGT 61.581 55.000 0.00 0.00 46.52 3.06
8952 12264 1.136147 GCTCAGCAGTTTGCCGATG 59.864 57.895 0.00 0.00 46.52 3.84
8953 12265 2.393768 CGCTCAGCAGTTTGCCGAT 61.394 57.895 0.00 0.00 46.52 4.18
8954 12266 3.043713 CGCTCAGCAGTTTGCCGA 61.044 61.111 0.00 0.00 46.52 5.54
8955 12267 4.093952 CCGCTCAGCAGTTTGCCG 62.094 66.667 0.00 0.00 46.52 5.69
8956 12268 2.980233 ACCGCTCAGCAGTTTGCC 60.980 61.111 0.00 0.00 46.52 4.52
8957 12269 2.253452 CACCGCTCAGCAGTTTGC 59.747 61.111 0.00 0.00 45.46 3.68
8958 12270 2.620112 CCCACCGCTCAGCAGTTTG 61.620 63.158 0.00 0.00 0.00 2.93
8959 12271 2.281761 CCCACCGCTCAGCAGTTT 60.282 61.111 0.00 0.00 0.00 2.66
8960 12272 2.818169 TTCCCACCGCTCAGCAGTT 61.818 57.895 0.00 0.00 0.00 3.16
8961 12273 3.241530 TTCCCACCGCTCAGCAGT 61.242 61.111 0.00 0.00 0.00 4.40
8962 12274 2.743928 GTTCCCACCGCTCAGCAG 60.744 66.667 0.00 0.00 0.00 4.24
8963 12275 2.894257 ATGTTCCCACCGCTCAGCA 61.894 57.895 0.00 0.00 0.00 4.41
8964 12276 2.045926 ATGTTCCCACCGCTCAGC 60.046 61.111 0.00 0.00 0.00 4.26
8965 12277 0.321564 TTCATGTTCCCACCGCTCAG 60.322 55.000 0.00 0.00 0.00 3.35
8966 12278 0.321564 CTTCATGTTCCCACCGCTCA 60.322 55.000 0.00 0.00 0.00 4.26
8967 12279 0.036388 TCTTCATGTTCCCACCGCTC 60.036 55.000 0.00 0.00 0.00 5.03
8968 12280 0.400213 TTCTTCATGTTCCCACCGCT 59.600 50.000 0.00 0.00 0.00 5.52
8969 12281 0.521735 GTTCTTCATGTTCCCACCGC 59.478 55.000 0.00 0.00 0.00 5.68
8970 12282 0.796312 CGTTCTTCATGTTCCCACCG 59.204 55.000 0.00 0.00 0.00 4.94
8971 12283 0.521735 GCGTTCTTCATGTTCCCACC 59.478 55.000 0.00 0.00 0.00 4.61
8972 12284 0.165944 CGCGTTCTTCATGTTCCCAC 59.834 55.000 0.00 0.00 0.00 4.61
8973 12285 0.953471 CCGCGTTCTTCATGTTCCCA 60.953 55.000 4.92 0.00 0.00 4.37
8974 12286 0.672401 TCCGCGTTCTTCATGTTCCC 60.672 55.000 4.92 0.00 0.00 3.97
8975 12287 0.442699 GTCCGCGTTCTTCATGTTCC 59.557 55.000 4.92 0.00 0.00 3.62
8976 12288 0.093026 CGTCCGCGTTCTTCATGTTC 59.907 55.000 4.92 0.00 0.00 3.18
8977 12289 1.897398 GCGTCCGCGTTCTTCATGTT 61.897 55.000 4.92 0.00 40.81 2.71
8978 12290 2.380410 GCGTCCGCGTTCTTCATGT 61.380 57.895 4.92 0.00 40.81 3.21
8979 12291 2.395690 GCGTCCGCGTTCTTCATG 59.604 61.111 4.92 0.00 40.81 3.07
9012 12324 1.532868 ACATTCACTTCGTGCAAGAGC 59.467 47.619 1.81 0.00 42.57 4.09
9013 12325 2.802247 TGACATTCACTTCGTGCAAGAG 59.198 45.455 1.81 0.37 35.82 2.85
9014 12326 2.832563 TGACATTCACTTCGTGCAAGA 58.167 42.857 0.00 0.00 35.82 3.02
9015 12327 3.548587 CTTGACATTCACTTCGTGCAAG 58.451 45.455 0.00 0.00 38.21 4.01
9016 12328 2.286950 GCTTGACATTCACTTCGTGCAA 60.287 45.455 0.00 0.00 32.98 4.08
9017 12329 1.264020 GCTTGACATTCACTTCGTGCA 59.736 47.619 0.00 0.00 32.98 4.57
9018 12330 1.532868 AGCTTGACATTCACTTCGTGC 59.467 47.619 0.00 0.00 32.98 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.