Multiple sequence alignment - TraesCS6A01G288000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G288000 chr6A 100.000 3944 0 0 1 3944 520439878 520443821 0.000000e+00 7284
1 TraesCS6A01G288000 chr6A 97.788 452 10 0 3493 3944 520494902 520495353 0.000000e+00 780
2 TraesCS6A01G288000 chr6A 97.788 452 10 0 3493 3944 520504005 520504456 0.000000e+00 780
3 TraesCS6A01G288000 chr6B 92.602 3528 172 43 4 3489 565392385 565395865 0.000000e+00 4987
4 TraesCS6A01G288000 chr6B 80.713 1711 317 12 1226 2928 63150988 63149283 0.000000e+00 1319
5 TraesCS6A01G288000 chr6B 80.320 1438 270 12 1499 2928 63169006 63167574 0.000000e+00 1075
6 TraesCS6A01G288000 chr6D 92.475 3442 175 37 60 3489 379047703 379051072 0.000000e+00 4844
7 TraesCS6A01G288000 chr1A 97.130 453 13 0 3492 3944 269440260 269440712 0.000000e+00 765
8 TraesCS6A01G288000 chr7A 96.903 452 14 0 3493 3944 401116520 401116971 0.000000e+00 758
9 TraesCS6A01G288000 chr7A 96.689 453 14 1 3493 3944 270987330 270987782 0.000000e+00 752
10 TraesCS6A01G288000 chr7A 96.460 452 16 0 3493 3944 627427376 627427827 0.000000e+00 747
11 TraesCS6A01G288000 chr7A 96.460 452 16 0 3493 3944 627436407 627436858 0.000000e+00 747
12 TraesCS6A01G288000 chr7A 79.310 290 55 4 456 744 503650154 503650439 8.640000e-47 198
13 TraesCS6A01G288000 chr5A 96.460 452 15 1 3493 3944 233967093 233967543 0.000000e+00 745
14 TraesCS6A01G288000 chr4A 96.239 452 17 0 3493 3944 579109047 579109498 0.000000e+00 741
15 TraesCS6A01G288000 chr4A 82.031 256 42 3 491 745 360654539 360654287 8.580000e-52 215
16 TraesCS6A01G288000 chr4B 83.721 215 34 1 459 672 11835210 11835424 6.680000e-48 202
17 TraesCS6A01G288000 chr4B 83.256 215 33 3 459 672 11841904 11842116 1.120000e-45 195
18 TraesCS6A01G288000 chr2A 80.952 231 40 4 452 679 497967614 497967843 3.130000e-41 180
19 TraesCS6A01G288000 chr4D 81.905 210 35 3 468 675 310557901 310557693 1.460000e-39 174
20 TraesCS6A01G288000 chr3A 80.357 224 43 1 460 682 170991975 170992198 6.780000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G288000 chr6A 520439878 520443821 3943 False 7284 7284 100.000 1 3944 1 chr6A.!!$F1 3943
1 TraesCS6A01G288000 chr6B 565392385 565395865 3480 False 4987 4987 92.602 4 3489 1 chr6B.!!$F1 3485
2 TraesCS6A01G288000 chr6B 63149283 63150988 1705 True 1319 1319 80.713 1226 2928 1 chr6B.!!$R1 1702
3 TraesCS6A01G288000 chr6B 63167574 63169006 1432 True 1075 1075 80.320 1499 2928 1 chr6B.!!$R2 1429
4 TraesCS6A01G288000 chr6D 379047703 379051072 3369 False 4844 4844 92.475 60 3489 1 chr6D.!!$F1 3429


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
766 805 0.036483 TGATAGCTTGGCGAGTGCAA 60.036 50.0 3.19 0.0 45.35 4.08 F
840 880 0.450983 GAGCATCAGCCTTTCTGCAC 59.549 55.0 0.00 0.0 42.56 4.57 F
2082 2125 0.035439 TGACTGGGAAAATCGAGGCC 60.035 55.0 0.00 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 2056 1.009829 GCAACAGGTCAGCCTTATCG 58.990 55.000 0.0 0.0 44.18 2.92 R
2376 2419 1.228124 GTGCTGCCCAACACCAGTA 60.228 57.895 0.0 0.0 0.00 2.74 R
3694 3745 0.103208 GTCTCCATAGGTCTGTGCCG 59.897 60.000 0.0 0.0 0.00 5.69 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
294 314 5.977171 AACCGAAAAATACTGGCAAAAAC 57.023 34.783 0.00 0.00 0.00 2.43
295 315 5.012328 ACCGAAAAATACTGGCAAAAACA 57.988 34.783 0.00 0.00 0.00 2.83
296 316 4.806775 ACCGAAAAATACTGGCAAAAACAC 59.193 37.500 0.00 0.00 0.00 3.32
297 317 4.806247 CCGAAAAATACTGGCAAAAACACA 59.194 37.500 0.00 0.00 0.00 3.72
298 318 5.276631 CCGAAAAATACTGGCAAAAACACAC 60.277 40.000 0.00 0.00 0.00 3.82
299 319 5.289675 CGAAAAATACTGGCAAAAACACACA 59.710 36.000 0.00 0.00 0.00 3.72
339 369 7.585579 AAATAAAGAAAACCGGACTTTACCA 57.414 32.000 9.46 0.60 38.38 3.25
343 373 3.749609 AGAAAACCGGACTTTACCAATCG 59.250 43.478 9.46 0.00 0.00 3.34
348 378 1.657094 CGGACTTTACCAATCGAACGG 59.343 52.381 2.06 2.06 0.00 4.44
401 431 1.075542 CGAGCAACACCGCTAATTGA 58.924 50.000 0.00 0.00 44.01 2.57
437 467 2.033372 TCGCCCGTAGACCATTCATAA 58.967 47.619 0.00 0.00 0.00 1.90
447 477 7.313646 CGTAGACCATTCATAAGAATCGGTAT 58.686 38.462 11.99 11.70 42.46 2.73
466 496 2.068834 TCGGAGAGACATAGGGGTTC 57.931 55.000 0.00 0.00 0.00 3.62
499 529 8.997621 TCTAACCATATCTTGTCACACTTTAC 57.002 34.615 0.00 0.00 0.00 2.01
502 532 6.721318 ACCATATCTTGTCACACTTTACCAT 58.279 36.000 0.00 0.00 0.00 3.55
505 535 7.768582 CCATATCTTGTCACACTTTACCATACA 59.231 37.037 0.00 0.00 0.00 2.29
509 539 6.649141 TCTTGTCACACTTTACCATACATCAC 59.351 38.462 0.00 0.00 0.00 3.06
515 545 7.038587 TCACACTTTACCATACATCACCTTAGT 60.039 37.037 0.00 0.00 0.00 2.24
521 551 8.958119 TTACCATACATCACCTTAGTCAAATC 57.042 34.615 0.00 0.00 0.00 2.17
537 567 9.958180 TTAGTCAAATCTGATCAAATTAGGTGA 57.042 29.630 0.00 0.00 33.05 4.02
540 570 9.383519 GTCAAATCTGATCAAATTAGGTGAGTA 57.616 33.333 0.00 0.00 33.05 2.59
600 632 2.092968 TGAGCAGTGAACCCCATATGTC 60.093 50.000 1.24 0.00 0.00 3.06
608 640 5.070981 AGTGAACCCCATATGTCATAGACAG 59.929 44.000 6.01 0.00 46.04 3.51
614 646 7.586349 ACCCCATATGTCATAGACAGAAAAAT 58.414 34.615 6.01 0.00 46.04 1.82
636 668 9.463443 AAAATTGTGAAAAGATTCCTTTAGACG 57.537 29.630 0.00 0.00 41.46 4.18
644 677 4.254492 AGATTCCTTTAGACGGTCAAAGC 58.746 43.478 19.03 10.86 31.69 3.51
664 697 7.921214 TCAAAGCGTGGTTAACAATTTAATCAA 59.079 29.630 8.10 0.00 39.51 2.57
685 724 8.668510 ATCAACTCAAGTAAGATAAATGCGAT 57.331 30.769 0.00 0.00 0.00 4.58
707 746 8.859156 GCGATAAATGTGACAAAAATAATGTGT 58.141 29.630 0.00 0.00 0.00 3.72
745 784 9.260002 GACAAAAATAATCACAATCCAAACAGT 57.740 29.630 0.00 0.00 0.00 3.55
747 786 9.480053 CAAAAATAATCACAATCCAAACAGTCT 57.520 29.630 0.00 0.00 0.00 3.24
748 787 9.480053 AAAAATAATCACAATCCAAACAGTCTG 57.520 29.630 0.00 0.00 0.00 3.51
754 793 4.940046 CACAATCCAAACAGTCTGATAGCT 59.060 41.667 6.91 0.00 0.00 3.32
766 805 0.036483 TGATAGCTTGGCGAGTGCAA 60.036 50.000 3.19 0.00 45.35 4.08
778 817 3.554324 GGCGAGTGCAAAATAGATACGAA 59.446 43.478 0.00 0.00 45.35 3.85
807 846 3.340034 GTGATATCACACGGGTCCAAAA 58.660 45.455 27.33 0.00 45.75 2.44
840 880 0.450983 GAGCATCAGCCTTTCTGCAC 59.549 55.000 0.00 0.00 42.56 4.57
889 929 1.014044 CGTCCCATCTGAACCACACG 61.014 60.000 0.00 0.00 0.00 4.49
955 995 1.064389 CCCAATTCCAACCCTCTCTCC 60.064 57.143 0.00 0.00 0.00 3.71
1275 1315 3.728267 CTGCGGCATCGTCGACGTA 62.728 63.158 34.40 22.41 40.80 3.57
1821 1864 2.426023 GTCCTGCGTCTGGTTGGT 59.574 61.111 3.49 0.00 0.00 3.67
2082 2125 0.035439 TGACTGGGAAAATCGAGGCC 60.035 55.000 0.00 0.00 0.00 5.19
2376 2419 1.639635 AAGGGGAGGCGATCATTGCT 61.640 55.000 0.00 0.00 0.00 3.91
2601 2644 2.544844 TCCGTATTGAGAACCTCCCT 57.455 50.000 0.00 0.00 0.00 4.20
2649 2692 0.409092 ATCTGGGAATGGTGGTGCAA 59.591 50.000 0.00 0.00 0.00 4.08
3100 3143 2.233186 ACTTAGTTCCGAACCCTGTAGC 59.767 50.000 7.68 0.00 0.00 3.58
3114 3157 4.141914 ACCCTGTAGCTTTGTAGTCTATGC 60.142 45.833 0.00 0.00 0.00 3.14
3281 3324 1.732259 CTTTACATGTCTGCCGTGTCC 59.268 52.381 0.00 0.00 42.38 4.02
3314 3365 2.121832 ACCGATGGAGGGTGGTCA 59.878 61.111 0.00 0.00 36.14 4.02
3333 3384 0.613777 AGCAGGTTTTAGACGGGGAG 59.386 55.000 0.00 0.00 0.00 4.30
3385 3436 5.165961 TCTGAATACAGTTGGGAGGAAAG 57.834 43.478 0.00 0.00 43.81 2.62
3389 3440 7.182026 TCTGAATACAGTTGGGAGGAAAGATAA 59.818 37.037 0.00 0.00 43.81 1.75
3400 3451 7.231467 TGGGAGGAAAGATAAAAGCATATACC 58.769 38.462 0.00 0.00 0.00 2.73
3402 3453 7.945109 GGGAGGAAAGATAAAAGCATATACCTT 59.055 37.037 0.00 0.00 0.00 3.50
3422 3473 7.732222 ACCTTGATTAATTTATTGAGCCCAA 57.268 32.000 0.00 0.00 36.61 4.12
3430 3481 5.990120 ATTTATTGAGCCCAATATCCAGC 57.010 39.130 1.09 0.00 42.80 4.85
3446 3497 8.579006 CAATATCCAGCCTAATTTATCAAGCAA 58.421 33.333 0.00 0.00 0.00 3.91
3450 3501 6.716628 TCCAGCCTAATTTATCAAGCAATAGG 59.283 38.462 0.00 0.00 0.00 2.57
3489 3540 5.396660 GGCATTCTTCTCTTCCTTGAGATCT 60.397 44.000 0.00 0.00 41.98 2.75
3490 3541 5.524646 GCATTCTTCTCTTCCTTGAGATCTG 59.475 44.000 0.00 0.00 41.98 2.90
3491 3542 5.674052 TTCTTCTCTTCCTTGAGATCTGG 57.326 43.478 0.00 0.00 41.98 3.86
3492 3543 4.682563 TCTTCTCTTCCTTGAGATCTGGT 58.317 43.478 0.00 0.00 41.98 4.00
3493 3544 4.465660 TCTTCTCTTCCTTGAGATCTGGTG 59.534 45.833 0.00 0.00 41.98 4.17
3494 3545 3.784178 TCTCTTCCTTGAGATCTGGTGT 58.216 45.455 0.00 0.00 38.08 4.16
3495 3546 3.766591 TCTCTTCCTTGAGATCTGGTGTC 59.233 47.826 0.00 0.00 38.08 3.67
3496 3547 2.493675 TCTTCCTTGAGATCTGGTGTCG 59.506 50.000 0.00 0.00 0.00 4.35
3497 3548 1.186200 TCCTTGAGATCTGGTGTCGG 58.814 55.000 0.00 0.00 0.00 4.79
3498 3549 0.176680 CCTTGAGATCTGGTGTCGGG 59.823 60.000 0.00 0.00 0.00 5.14
3499 3550 1.186200 CTTGAGATCTGGTGTCGGGA 58.814 55.000 0.00 0.00 0.00 5.14
3500 3551 0.895530 TTGAGATCTGGTGTCGGGAC 59.104 55.000 0.00 0.00 0.00 4.46
3501 3552 0.970937 TGAGATCTGGTGTCGGGACC 60.971 60.000 0.00 0.00 36.43 4.46
3502 3553 1.677637 GAGATCTGGTGTCGGGACCC 61.678 65.000 0.00 0.00 34.79 4.46
3503 3554 2.687566 ATCTGGTGTCGGGACCCC 60.688 66.667 4.46 0.00 34.79 4.95
3515 3566 1.492764 GGGACCCCGATTCTAAGTCA 58.507 55.000 0.00 0.00 0.00 3.41
3516 3567 1.138464 GGGACCCCGATTCTAAGTCAC 59.862 57.143 0.00 0.00 0.00 3.67
3517 3568 1.829222 GGACCCCGATTCTAAGTCACA 59.171 52.381 0.00 0.00 0.00 3.58
3518 3569 2.418334 GGACCCCGATTCTAAGTCACAC 60.418 54.545 0.00 0.00 0.00 3.82
3519 3570 1.553704 ACCCCGATTCTAAGTCACACC 59.446 52.381 0.00 0.00 0.00 4.16
3520 3571 1.470979 CCCCGATTCTAAGTCACACCG 60.471 57.143 0.00 0.00 0.00 4.94
3521 3572 1.475280 CCCGATTCTAAGTCACACCGA 59.525 52.381 0.00 0.00 0.00 4.69
3522 3573 2.100916 CCCGATTCTAAGTCACACCGAT 59.899 50.000 0.00 0.00 0.00 4.18
3523 3574 3.372954 CCGATTCTAAGTCACACCGATC 58.627 50.000 0.00 0.00 0.00 3.69
3524 3575 3.066900 CCGATTCTAAGTCACACCGATCT 59.933 47.826 0.00 0.00 0.00 2.75
3525 3576 4.275196 CCGATTCTAAGTCACACCGATCTA 59.725 45.833 0.00 0.00 0.00 1.98
3526 3577 5.444983 CGATTCTAAGTCACACCGATCTAG 58.555 45.833 0.00 0.00 0.00 2.43
3527 3578 4.634184 TTCTAAGTCACACCGATCTAGC 57.366 45.455 0.00 0.00 0.00 3.42
3528 3579 3.617284 TCTAAGTCACACCGATCTAGCA 58.383 45.455 0.00 0.00 0.00 3.49
3529 3580 4.207955 TCTAAGTCACACCGATCTAGCAT 58.792 43.478 0.00 0.00 0.00 3.79
3530 3581 2.879002 AGTCACACCGATCTAGCATG 57.121 50.000 0.00 0.00 0.00 4.06
3531 3582 2.103373 AGTCACACCGATCTAGCATGT 58.897 47.619 0.00 0.00 0.00 3.21
3532 3583 3.288092 AGTCACACCGATCTAGCATGTA 58.712 45.455 0.00 0.00 0.00 2.29
3533 3584 3.699538 AGTCACACCGATCTAGCATGTAA 59.300 43.478 0.00 0.00 0.00 2.41
3534 3585 3.797256 GTCACACCGATCTAGCATGTAAC 59.203 47.826 0.00 0.00 0.00 2.50
3535 3586 3.445805 TCACACCGATCTAGCATGTAACA 59.554 43.478 0.00 0.00 0.00 2.41
3536 3587 3.551890 CACACCGATCTAGCATGTAACAC 59.448 47.826 0.00 0.00 0.00 3.32
3537 3588 3.123804 CACCGATCTAGCATGTAACACC 58.876 50.000 0.00 0.00 0.00 4.16
3538 3589 3.031736 ACCGATCTAGCATGTAACACCT 58.968 45.455 0.00 0.00 0.00 4.00
3539 3590 3.068307 ACCGATCTAGCATGTAACACCTC 59.932 47.826 0.00 0.00 0.00 3.85
3540 3591 3.068165 CCGATCTAGCATGTAACACCTCA 59.932 47.826 0.00 0.00 0.00 3.86
3541 3592 4.262207 CCGATCTAGCATGTAACACCTCAT 60.262 45.833 0.00 0.00 0.00 2.90
3542 3593 5.048013 CCGATCTAGCATGTAACACCTCATA 60.048 44.000 0.00 0.00 0.00 2.15
3543 3594 6.350528 CCGATCTAGCATGTAACACCTCATAT 60.351 42.308 0.00 0.00 0.00 1.78
3544 3595 6.749578 CGATCTAGCATGTAACACCTCATATC 59.250 42.308 0.00 0.00 0.00 1.63
3545 3596 6.976934 TCTAGCATGTAACACCTCATATCA 57.023 37.500 0.00 0.00 0.00 2.15
3546 3597 6.749139 TCTAGCATGTAACACCTCATATCAC 58.251 40.000 0.00 0.00 0.00 3.06
3547 3598 5.620738 AGCATGTAACACCTCATATCACT 57.379 39.130 0.00 0.00 0.00 3.41
3548 3599 5.994250 AGCATGTAACACCTCATATCACTT 58.006 37.500 0.00 0.00 0.00 3.16
3549 3600 6.418101 AGCATGTAACACCTCATATCACTTT 58.582 36.000 0.00 0.00 0.00 2.66
3550 3601 6.317140 AGCATGTAACACCTCATATCACTTTG 59.683 38.462 0.00 0.00 0.00 2.77
3551 3602 6.489675 CATGTAACACCTCATATCACTTTGC 58.510 40.000 0.00 0.00 0.00 3.68
3552 3603 4.629634 TGTAACACCTCATATCACTTTGCG 59.370 41.667 0.00 0.00 0.00 4.85
3553 3604 2.632377 ACACCTCATATCACTTTGCGG 58.368 47.619 0.00 0.00 0.00 5.69
3554 3605 1.331756 CACCTCATATCACTTTGCGGC 59.668 52.381 0.00 0.00 0.00 6.53
3555 3606 0.947244 CCTCATATCACTTTGCGGCC 59.053 55.000 0.00 0.00 0.00 6.13
3556 3607 1.475751 CCTCATATCACTTTGCGGCCT 60.476 52.381 0.00 0.00 0.00 5.19
3557 3608 1.869767 CTCATATCACTTTGCGGCCTC 59.130 52.381 0.00 0.00 0.00 4.70
3558 3609 1.209261 TCATATCACTTTGCGGCCTCA 59.791 47.619 0.00 0.00 0.00 3.86
3559 3610 1.331756 CATATCACTTTGCGGCCTCAC 59.668 52.381 0.00 0.00 0.00 3.51
3560 3611 0.739462 TATCACTTTGCGGCCTCACG 60.739 55.000 0.00 0.00 0.00 4.35
3568 3619 4.508128 CGGCCTCACGCACGGTAT 62.508 66.667 0.00 0.00 40.31 2.73
3569 3620 2.585247 GGCCTCACGCACGGTATC 60.585 66.667 0.00 0.00 40.31 2.24
3570 3621 2.585247 GCCTCACGCACGGTATCC 60.585 66.667 0.00 0.00 37.47 2.59
3571 3622 3.077519 GCCTCACGCACGGTATCCT 62.078 63.158 0.00 0.00 37.47 3.24
3572 3623 1.065928 CCTCACGCACGGTATCCTC 59.934 63.158 0.00 0.00 0.00 3.71
3573 3624 1.663379 CCTCACGCACGGTATCCTCA 61.663 60.000 0.00 0.00 0.00 3.86
3574 3625 0.525668 CTCACGCACGGTATCCTCAC 60.526 60.000 0.00 0.00 0.00 3.51
3575 3626 1.872234 CACGCACGGTATCCTCACG 60.872 63.158 0.00 0.00 0.00 4.35
3576 3627 2.278596 CGCACGGTATCCTCACGG 60.279 66.667 0.00 0.00 0.00 4.94
3577 3628 2.106332 GCACGGTATCCTCACGGG 59.894 66.667 0.00 0.00 0.00 5.28
3578 3629 2.718073 GCACGGTATCCTCACGGGT 61.718 63.158 0.00 0.00 36.25 5.28
3579 3630 1.141019 CACGGTATCCTCACGGGTG 59.859 63.158 0.00 0.00 36.25 4.61
3580 3631 1.304713 ACGGTATCCTCACGGGTGT 60.305 57.895 0.00 0.00 36.25 4.16
3581 3632 1.318158 ACGGTATCCTCACGGGTGTC 61.318 60.000 0.00 0.00 36.25 3.67
3582 3633 1.436336 GGTATCCTCACGGGTGTCG 59.564 63.158 0.00 0.00 45.88 4.35
3583 3634 1.226888 GTATCCTCACGGGTGTCGC 60.227 63.158 0.00 0.00 43.89 5.19
3584 3635 2.420568 TATCCTCACGGGTGTCGCC 61.421 63.158 0.00 0.00 43.89 5.54
3585 3636 2.849096 TATCCTCACGGGTGTCGCCT 62.849 60.000 1.66 0.00 43.89 5.52
3586 3637 4.003788 CCTCACGGGTGTCGCCTT 62.004 66.667 1.66 0.00 43.89 4.35
3587 3638 2.642254 CCTCACGGGTGTCGCCTTA 61.642 63.158 1.66 0.00 43.89 2.69
3588 3639 1.445582 CTCACGGGTGTCGCCTTAC 60.446 63.158 1.66 0.00 43.89 2.34
3589 3640 2.433664 CACGGGTGTCGCCTTACC 60.434 66.667 1.66 0.00 43.89 2.85
3590 3641 2.918802 ACGGGTGTCGCCTTACCA 60.919 61.111 1.66 0.00 43.89 3.25
3591 3642 2.288025 ACGGGTGTCGCCTTACCAT 61.288 57.895 1.66 0.00 43.89 3.55
3592 3643 1.813753 CGGGTGTCGCCTTACCATG 60.814 63.158 1.66 0.00 38.74 3.66
3593 3644 1.451387 GGGTGTCGCCTTACCATGG 60.451 63.158 11.19 11.19 38.74 3.66
3594 3645 2.112815 GGTGTCGCCTTACCATGGC 61.113 63.158 13.04 0.00 46.42 4.40
3599 3650 4.894896 GCCTTACCATGGCCCGGG 62.895 72.222 19.09 19.09 44.32 5.73
3600 3651 3.093835 CCTTACCATGGCCCGGGA 61.094 66.667 29.31 3.75 0.00 5.14
3601 3652 2.192175 CTTACCATGGCCCGGGAC 59.808 66.667 29.31 26.59 0.00 4.46
3602 3653 3.413300 TTACCATGGCCCGGGACC 61.413 66.667 27.91 24.83 0.00 4.46
3606 3657 4.733542 CATGGCCCGGGACCGTTT 62.734 66.667 27.91 10.67 37.81 3.60
3607 3658 4.733542 ATGGCCCGGGACCGTTTG 62.734 66.667 27.91 0.00 37.81 2.93
3614 3665 3.292159 GGGACCGTTTGCGCCTTT 61.292 61.111 4.18 0.00 36.67 3.11
3615 3666 2.725641 GGACCGTTTGCGCCTTTT 59.274 55.556 4.18 0.00 36.67 2.27
3616 3667 1.660264 GGACCGTTTGCGCCTTTTG 60.660 57.895 4.18 0.00 36.67 2.44
3617 3668 1.660264 GACCGTTTGCGCCTTTTGG 60.660 57.895 4.18 2.72 44.18 3.28
3632 3683 5.348418 CCTTTTGGCTCACGTATATGATG 57.652 43.478 0.00 0.00 0.00 3.07
3633 3684 4.214119 CCTTTTGGCTCACGTATATGATGG 59.786 45.833 0.00 0.00 0.00 3.51
3634 3685 4.415881 TTTGGCTCACGTATATGATGGT 57.584 40.909 0.00 0.00 0.00 3.55
3635 3686 3.385193 TGGCTCACGTATATGATGGTG 57.615 47.619 0.00 0.00 0.00 4.17
3636 3687 2.698274 TGGCTCACGTATATGATGGTGT 59.302 45.455 0.00 0.00 0.00 4.16
3637 3688 3.243737 TGGCTCACGTATATGATGGTGTC 60.244 47.826 0.00 0.00 0.00 3.67
3638 3689 2.980476 GCTCACGTATATGATGGTGTCG 59.020 50.000 0.00 0.00 0.00 4.35
3639 3690 2.980476 CTCACGTATATGATGGTGTCGC 59.020 50.000 0.00 0.00 0.00 5.19
3640 3691 2.621526 TCACGTATATGATGGTGTCGCT 59.378 45.455 0.00 0.00 0.00 4.93
3641 3692 3.816523 TCACGTATATGATGGTGTCGCTA 59.183 43.478 0.00 0.00 0.00 4.26
3642 3693 4.083484 TCACGTATATGATGGTGTCGCTAG 60.083 45.833 0.00 0.00 0.00 3.42
3643 3694 3.819337 ACGTATATGATGGTGTCGCTAGT 59.181 43.478 0.00 0.00 0.00 2.57
3644 3695 4.999311 ACGTATATGATGGTGTCGCTAGTA 59.001 41.667 0.00 0.00 0.00 1.82
3645 3696 5.646793 ACGTATATGATGGTGTCGCTAGTAT 59.353 40.000 0.00 0.00 0.00 2.12
3646 3697 6.183360 ACGTATATGATGGTGTCGCTAGTATC 60.183 42.308 0.00 0.00 0.00 2.24
3647 3698 3.944055 ATGATGGTGTCGCTAGTATCC 57.056 47.619 0.00 0.00 0.00 2.59
3648 3699 2.661718 TGATGGTGTCGCTAGTATCCA 58.338 47.619 0.00 0.00 0.00 3.41
3649 3700 3.230976 TGATGGTGTCGCTAGTATCCAT 58.769 45.455 0.00 0.00 38.21 3.41
3650 3701 4.403734 TGATGGTGTCGCTAGTATCCATA 58.596 43.478 0.00 0.00 36.07 2.74
3651 3702 5.016831 TGATGGTGTCGCTAGTATCCATAT 58.983 41.667 0.00 0.00 36.07 1.78
3652 3703 4.783764 TGGTGTCGCTAGTATCCATATG 57.216 45.455 0.00 0.00 0.00 1.78
3653 3704 4.403734 TGGTGTCGCTAGTATCCATATGA 58.596 43.478 3.65 0.00 0.00 2.15
3654 3705 4.217767 TGGTGTCGCTAGTATCCATATGAC 59.782 45.833 3.65 0.00 0.00 3.06
3655 3706 4.217767 GGTGTCGCTAGTATCCATATGACA 59.782 45.833 3.65 0.00 33.14 3.58
3656 3707 5.394802 GTGTCGCTAGTATCCATATGACAG 58.605 45.833 3.65 0.00 35.96 3.51
3657 3708 5.181433 GTGTCGCTAGTATCCATATGACAGA 59.819 44.000 3.65 0.00 35.96 3.41
3658 3709 5.412904 TGTCGCTAGTATCCATATGACAGAG 59.587 44.000 3.65 0.00 31.99 3.35
3659 3710 5.644206 GTCGCTAGTATCCATATGACAGAGA 59.356 44.000 3.65 0.00 0.00 3.10
3660 3711 6.149640 GTCGCTAGTATCCATATGACAGAGAA 59.850 42.308 3.65 0.00 0.00 2.87
3661 3712 6.149640 TCGCTAGTATCCATATGACAGAGAAC 59.850 42.308 3.65 0.00 0.00 3.01
3662 3713 6.623986 CGCTAGTATCCATATGACAGAGAACC 60.624 46.154 3.65 0.00 0.00 3.62
3663 3714 6.350612 GCTAGTATCCATATGACAGAGAACCC 60.351 46.154 3.65 0.00 0.00 4.11
3664 3715 4.524714 AGTATCCATATGACAGAGAACCCG 59.475 45.833 3.65 0.00 0.00 5.28
3665 3716 2.039418 TCCATATGACAGAGAACCCGG 58.961 52.381 3.65 0.00 0.00 5.73
3666 3717 1.070758 CCATATGACAGAGAACCCGGG 59.929 57.143 22.25 22.25 0.00 5.73
3667 3718 0.759346 ATATGACAGAGAACCCGGGC 59.241 55.000 24.08 4.85 0.00 6.13
3668 3719 1.335132 TATGACAGAGAACCCGGGCC 61.335 60.000 24.08 13.60 0.00 5.80
3669 3720 4.452733 GACAGAGAACCCGGGCCG 62.453 72.222 24.08 21.46 0.00 6.13
3671 3722 4.452733 CAGAGAACCCGGGCCGAC 62.453 72.222 30.79 15.36 0.00 4.79
3673 3724 3.782443 GAGAACCCGGGCCGACAT 61.782 66.667 30.79 12.71 0.00 3.06
3674 3725 2.364579 AGAACCCGGGCCGACATA 60.365 61.111 30.79 0.00 0.00 2.29
3675 3726 2.108362 GAACCCGGGCCGACATAG 59.892 66.667 30.79 10.20 0.00 2.23
3676 3727 4.171103 AACCCGGGCCGACATAGC 62.171 66.667 30.79 0.00 0.00 2.97
3678 3729 2.915659 CCCGGGCCGACATAGCTA 60.916 66.667 30.79 0.00 0.00 3.32
3679 3730 2.651361 CCGGGCCGACATAGCTAG 59.349 66.667 30.79 2.47 0.00 3.42
3680 3731 2.201022 CCGGGCCGACATAGCTAGT 61.201 63.158 30.79 0.00 0.00 2.57
3681 3732 1.286260 CGGGCCGACATAGCTAGTC 59.714 63.158 24.41 6.44 0.00 2.59
3689 3740 3.081329 GACATAGCTAGTCGTGAACCC 57.919 52.381 0.00 0.00 0.00 4.11
3690 3741 2.426024 GACATAGCTAGTCGTGAACCCA 59.574 50.000 0.00 0.00 0.00 4.51
3691 3742 2.829720 ACATAGCTAGTCGTGAACCCAA 59.170 45.455 0.00 0.00 0.00 4.12
3692 3743 3.259876 ACATAGCTAGTCGTGAACCCAAA 59.740 43.478 0.00 0.00 0.00 3.28
3693 3744 2.457366 AGCTAGTCGTGAACCCAAAG 57.543 50.000 0.00 0.00 0.00 2.77
3694 3745 0.796927 GCTAGTCGTGAACCCAAAGC 59.203 55.000 0.00 0.00 0.00 3.51
3695 3746 1.068474 CTAGTCGTGAACCCAAAGCG 58.932 55.000 0.00 0.00 0.00 4.68
3696 3747 0.320073 TAGTCGTGAACCCAAAGCGG 60.320 55.000 0.00 0.00 0.00 5.52
3697 3748 2.975799 TCGTGAACCCAAAGCGGC 60.976 61.111 0.00 0.00 0.00 6.53
3698 3749 3.283684 CGTGAACCCAAAGCGGCA 61.284 61.111 1.45 0.00 0.00 5.69
3699 3750 2.335011 GTGAACCCAAAGCGGCAC 59.665 61.111 1.45 0.00 0.00 5.01
3700 3751 2.124109 TGAACCCAAAGCGGCACA 60.124 55.556 1.45 0.00 0.00 4.57
3701 3752 2.192861 TGAACCCAAAGCGGCACAG 61.193 57.895 1.45 0.00 0.00 3.66
3702 3753 1.896660 GAACCCAAAGCGGCACAGA 60.897 57.895 1.45 0.00 0.00 3.41
3703 3754 2.130073 GAACCCAAAGCGGCACAGAC 62.130 60.000 1.45 0.00 0.00 3.51
3704 3755 3.365265 CCCAAAGCGGCACAGACC 61.365 66.667 1.45 0.00 0.00 3.85
3705 3756 2.281761 CCAAAGCGGCACAGACCT 60.282 61.111 1.45 0.00 0.00 3.85
3706 3757 1.003839 CCAAAGCGGCACAGACCTA 60.004 57.895 1.45 0.00 0.00 3.08
3707 3758 0.392998 CCAAAGCGGCACAGACCTAT 60.393 55.000 1.45 0.00 0.00 2.57
3708 3759 0.729116 CAAAGCGGCACAGACCTATG 59.271 55.000 1.45 0.00 0.00 2.23
3709 3760 0.392998 AAAGCGGCACAGACCTATGG 60.393 55.000 1.45 0.00 0.00 2.74
3710 3761 1.264749 AAGCGGCACAGACCTATGGA 61.265 55.000 1.45 0.00 0.00 3.41
3711 3762 1.227380 GCGGCACAGACCTATGGAG 60.227 63.158 0.00 0.00 0.00 3.86
3712 3763 1.676678 GCGGCACAGACCTATGGAGA 61.677 60.000 0.00 0.00 0.00 3.71
3713 3764 0.103208 CGGCACAGACCTATGGAGAC 59.897 60.000 0.00 0.00 0.00 3.36
3728 3779 4.077300 TGGAGACAGGCATACATGAATC 57.923 45.455 0.00 0.00 35.01 2.52
3729 3780 3.455543 TGGAGACAGGCATACATGAATCA 59.544 43.478 0.00 0.00 35.01 2.57
3730 3781 3.812053 GGAGACAGGCATACATGAATCAC 59.188 47.826 0.00 0.00 0.00 3.06
3731 3782 4.445453 GAGACAGGCATACATGAATCACA 58.555 43.478 0.00 0.00 0.00 3.58
3732 3783 5.045012 AGACAGGCATACATGAATCACAT 57.955 39.130 0.00 0.00 40.17 3.21
3733 3784 5.061853 AGACAGGCATACATGAATCACATC 58.938 41.667 0.00 0.00 37.07 3.06
3734 3785 4.139786 ACAGGCATACATGAATCACATCC 58.860 43.478 0.00 0.00 37.07 3.51
3735 3786 4.139038 CAGGCATACATGAATCACATCCA 58.861 43.478 0.00 0.00 37.07 3.41
3736 3787 4.215613 CAGGCATACATGAATCACATCCAG 59.784 45.833 0.00 0.00 37.07 3.86
3737 3788 3.057736 GGCATACATGAATCACATCCAGC 60.058 47.826 0.00 0.00 37.07 4.85
3738 3789 3.566742 GCATACATGAATCACATCCAGCA 59.433 43.478 0.00 0.00 37.07 4.41
3739 3790 4.217767 GCATACATGAATCACATCCAGCAT 59.782 41.667 0.00 0.00 37.07 3.79
3740 3791 5.699839 CATACATGAATCACATCCAGCATG 58.300 41.667 0.00 0.00 37.07 4.06
3742 3793 3.630769 ACATGAATCACATCCAGCATGTC 59.369 43.478 0.00 0.00 44.60 3.06
3743 3794 2.282407 TGAATCACATCCAGCATGTCG 58.718 47.619 0.00 0.00 44.60 4.35
3744 3795 1.600957 GAATCACATCCAGCATGTCGG 59.399 52.381 0.00 0.00 44.60 4.79
3745 3796 0.543277 ATCACATCCAGCATGTCGGT 59.457 50.000 0.00 0.00 44.60 4.69
3746 3797 0.108186 TCACATCCAGCATGTCGGTC 60.108 55.000 0.00 0.00 44.60 4.79
3747 3798 0.391528 CACATCCAGCATGTCGGTCA 60.392 55.000 0.00 0.00 44.60 4.02
3748 3799 0.324614 ACATCCAGCATGTCGGTCAA 59.675 50.000 0.00 0.00 42.62 3.18
3749 3800 0.729116 CATCCAGCATGTCGGTCAAC 59.271 55.000 0.00 0.00 0.00 3.18
3750 3801 0.324614 ATCCAGCATGTCGGTCAACA 59.675 50.000 0.00 0.00 0.00 3.33
3751 3802 0.320683 TCCAGCATGTCGGTCAACAG 60.321 55.000 0.00 0.00 31.50 3.16
3752 3803 1.499056 CAGCATGTCGGTCAACAGC 59.501 57.895 0.00 0.00 31.50 4.40
3753 3804 2.029288 AGCATGTCGGTCAACAGCG 61.029 57.895 0.00 0.00 45.20 5.18
3754 3805 2.317609 GCATGTCGGTCAACAGCGT 61.318 57.895 0.00 0.00 44.16 5.07
3755 3806 1.011968 GCATGTCGGTCAACAGCGTA 61.012 55.000 0.00 0.00 44.16 4.42
3756 3807 1.640428 CATGTCGGTCAACAGCGTAT 58.360 50.000 0.00 0.00 44.16 3.06
3757 3808 1.324435 CATGTCGGTCAACAGCGTATG 59.676 52.381 0.00 0.00 44.16 2.39
3758 3809 0.599060 TGTCGGTCAACAGCGTATGA 59.401 50.000 0.00 0.00 44.16 2.15
3759 3810 1.000052 TGTCGGTCAACAGCGTATGAA 60.000 47.619 0.00 0.00 44.16 2.57
3760 3811 2.268298 GTCGGTCAACAGCGTATGAAT 58.732 47.619 0.00 0.00 44.16 2.57
3761 3812 2.281762 GTCGGTCAACAGCGTATGAATC 59.718 50.000 0.00 0.00 44.16 2.52
3762 3813 1.593006 CGGTCAACAGCGTATGAATCC 59.407 52.381 0.00 0.00 38.76 3.01
3763 3814 2.627945 GGTCAACAGCGTATGAATCCA 58.372 47.619 0.00 0.00 0.00 3.41
3764 3815 2.609459 GGTCAACAGCGTATGAATCCAG 59.391 50.000 0.00 0.00 0.00 3.86
3765 3816 2.609459 GTCAACAGCGTATGAATCCAGG 59.391 50.000 0.00 0.00 0.00 4.45
3766 3817 1.331756 CAACAGCGTATGAATCCAGGC 59.668 52.381 0.00 0.00 0.00 4.85
3767 3818 0.833287 ACAGCGTATGAATCCAGGCT 59.167 50.000 0.00 0.00 0.00 4.58
3768 3819 1.224075 CAGCGTATGAATCCAGGCTG 58.776 55.000 7.75 7.75 38.08 4.85
3769 3820 0.833287 AGCGTATGAATCCAGGCTGT 59.167 50.000 14.43 0.00 0.00 4.40
3770 3821 2.039418 AGCGTATGAATCCAGGCTGTA 58.961 47.619 14.43 0.00 0.00 2.74
3771 3822 2.036475 AGCGTATGAATCCAGGCTGTAG 59.964 50.000 14.43 0.00 0.00 2.74
3772 3823 2.408050 CGTATGAATCCAGGCTGTAGC 58.592 52.381 14.43 0.00 41.14 3.58
3773 3824 2.224042 CGTATGAATCCAGGCTGTAGCA 60.224 50.000 14.43 6.41 44.36 3.49
3774 3825 2.338577 ATGAATCCAGGCTGTAGCAC 57.661 50.000 14.43 1.70 44.36 4.40
3775 3826 1.279496 TGAATCCAGGCTGTAGCACT 58.721 50.000 14.43 0.00 44.36 4.40
3776 3827 1.065926 TGAATCCAGGCTGTAGCACTG 60.066 52.381 14.43 10.05 44.36 3.66
3778 3829 2.270205 CCAGGCTGTAGCACTGGG 59.730 66.667 22.92 9.51 46.46 4.45
3779 3830 2.437359 CAGGCTGTAGCACTGGGC 60.437 66.667 6.28 0.00 44.36 5.36
3788 3839 4.303257 GCACTGGGCTAACAGGAC 57.697 61.111 0.00 0.00 42.75 3.85
3789 3840 1.679898 GCACTGGGCTAACAGGACT 59.320 57.895 0.00 0.00 42.75 3.85
3790 3841 0.391793 GCACTGGGCTAACAGGACTC 60.392 60.000 0.00 0.00 42.75 3.36
3791 3842 0.250513 CACTGGGCTAACAGGACTCC 59.749 60.000 8.13 0.00 42.75 3.85
3792 3843 1.258445 ACTGGGCTAACAGGACTCCG 61.258 60.000 8.13 0.00 42.75 4.63
3793 3844 1.961180 CTGGGCTAACAGGACTCCGG 61.961 65.000 0.00 0.00 34.84 5.14
3794 3845 2.732619 GGGCTAACAGGACTCCGGG 61.733 68.421 0.00 0.00 0.00 5.73
3795 3846 2.732619 GGCTAACAGGACTCCGGGG 61.733 68.421 0.00 0.00 0.00 5.73
3796 3847 1.684734 GCTAACAGGACTCCGGGGA 60.685 63.158 9.33 0.00 0.00 4.81
3797 3848 1.262640 GCTAACAGGACTCCGGGGAA 61.263 60.000 9.33 0.00 0.00 3.97
3798 3849 0.535797 CTAACAGGACTCCGGGGAAC 59.464 60.000 9.33 0.00 0.00 3.62
3811 3862 3.712907 GGAACCCGGGCTGTAGCA 61.713 66.667 24.08 0.00 44.36 3.49
3812 3863 2.125106 GAACCCGGGCTGTAGCAG 60.125 66.667 24.08 0.00 44.36 4.24
3813 3864 3.682292 GAACCCGGGCTGTAGCAGG 62.682 68.421 24.08 8.22 44.36 4.85
3820 3871 2.903357 GCTGTAGCAGGCTAGGCA 59.097 61.111 19.70 6.44 41.59 4.75
3821 3872 1.227497 GCTGTAGCAGGCTAGGCAG 60.227 63.158 19.70 12.04 41.59 4.85
3822 3873 1.445095 CTGTAGCAGGCTAGGCAGG 59.555 63.158 19.70 11.18 0.00 4.85
3823 3874 1.001631 TGTAGCAGGCTAGGCAGGA 59.998 57.895 19.70 0.00 0.00 3.86
3824 3875 1.330655 TGTAGCAGGCTAGGCAGGAC 61.331 60.000 19.70 10.83 0.00 3.85
3825 3876 1.045911 GTAGCAGGCTAGGCAGGACT 61.046 60.000 19.70 11.67 0.00 3.85
3826 3877 0.757188 TAGCAGGCTAGGCAGGACTC 60.757 60.000 19.70 0.00 0.00 3.36
3827 3878 3.100503 GCAGGCTAGGCAGGACTCC 62.101 68.421 19.70 0.00 0.00 3.85
3828 3879 2.443016 AGGCTAGGCAGGACTCCG 60.443 66.667 19.70 0.00 0.00 4.63
3829 3880 3.541713 GGCTAGGCAGGACTCCGG 61.542 72.222 12.16 0.00 0.00 5.14
3830 3881 2.442272 GCTAGGCAGGACTCCGGA 60.442 66.667 2.93 2.93 0.00 5.14
3831 3882 2.058595 GCTAGGCAGGACTCCGGAA 61.059 63.158 5.23 0.00 0.00 4.30
3832 3883 2.022240 GCTAGGCAGGACTCCGGAAG 62.022 65.000 5.23 2.09 0.00 3.46
3833 3884 0.684805 CTAGGCAGGACTCCGGAAGT 60.685 60.000 5.23 5.87 42.42 3.01
3850 3901 3.960237 TCACCGCGTGACATTTCC 58.040 55.556 4.92 0.00 37.67 3.13
3851 3902 1.669760 TCACCGCGTGACATTTCCC 60.670 57.895 4.92 0.00 37.67 3.97
3852 3903 2.359478 ACCGCGTGACATTTCCCC 60.359 61.111 4.92 0.00 0.00 4.81
3853 3904 3.496131 CCGCGTGACATTTCCCCG 61.496 66.667 4.92 0.00 0.00 5.73
3854 3905 2.433491 CGCGTGACATTTCCCCGA 60.433 61.111 0.00 0.00 0.00 5.14
3855 3906 2.030401 CGCGTGACATTTCCCCGAA 61.030 57.895 0.00 0.00 0.00 4.30
3856 3907 1.794222 GCGTGACATTTCCCCGAAG 59.206 57.895 0.00 0.00 0.00 3.79
3873 3924 3.639538 CGAAGGGACATACATAGGAACG 58.360 50.000 0.00 0.00 0.00 3.95
3874 3925 3.317149 CGAAGGGACATACATAGGAACGA 59.683 47.826 0.00 0.00 0.00 3.85
3875 3926 4.202080 CGAAGGGACATACATAGGAACGAA 60.202 45.833 0.00 0.00 0.00 3.85
3876 3927 4.939052 AGGGACATACATAGGAACGAAG 57.061 45.455 0.00 0.00 0.00 3.79
3878 3929 4.099573 AGGGACATACATAGGAACGAAGTG 59.900 45.833 0.00 0.00 45.00 3.16
3879 3930 4.369182 GGACATACATAGGAACGAAGTGG 58.631 47.826 0.00 0.00 45.00 4.00
3880 3931 4.098960 GGACATACATAGGAACGAAGTGGA 59.901 45.833 0.00 0.00 45.00 4.02
3881 3932 5.394883 GGACATACATAGGAACGAAGTGGAA 60.395 44.000 0.00 0.00 45.00 3.53
3882 3933 5.416947 ACATACATAGGAACGAAGTGGAAC 58.583 41.667 0.00 0.00 45.00 3.62
3883 3934 5.046878 ACATACATAGGAACGAAGTGGAACA 60.047 40.000 0.00 0.00 45.00 3.18
3894 3945 4.277009 TGGAACACATGCCGGCCA 62.277 61.111 26.77 12.96 0.00 5.36
3895 3946 3.443045 GGAACACATGCCGGCCAG 61.443 66.667 26.77 19.13 0.00 4.85
3896 3947 2.672996 GAACACATGCCGGCCAGT 60.673 61.111 26.77 19.89 0.00 4.00
3897 3948 2.672996 AACACATGCCGGCCAGTC 60.673 61.111 26.77 0.00 0.00 3.51
3898 3949 3.490031 AACACATGCCGGCCAGTCA 62.490 57.895 26.77 4.49 0.00 3.41
3899 3950 2.672651 CACATGCCGGCCAGTCAA 60.673 61.111 26.77 3.54 0.00 3.18
3900 3951 2.360350 ACATGCCGGCCAGTCAAG 60.360 61.111 26.77 3.85 0.00 3.02
3901 3952 2.360350 CATGCCGGCCAGTCAAGT 60.360 61.111 26.77 0.00 0.00 3.16
3902 3953 2.360350 ATGCCGGCCAGTCAAGTG 60.360 61.111 26.77 0.00 0.00 3.16
3903 3954 3.196207 ATGCCGGCCAGTCAAGTGT 62.196 57.895 26.77 0.00 0.00 3.55
3904 3955 2.594592 GCCGGCCAGTCAAGTGTT 60.595 61.111 18.11 0.00 0.00 3.32
3905 3956 2.617274 GCCGGCCAGTCAAGTGTTC 61.617 63.158 18.11 0.00 0.00 3.18
3906 3957 1.071471 CCGGCCAGTCAAGTGTTCT 59.929 57.895 2.24 0.00 0.00 3.01
3907 3958 1.230635 CCGGCCAGTCAAGTGTTCTG 61.231 60.000 2.24 0.00 0.00 3.02
3908 3959 0.249868 CGGCCAGTCAAGTGTTCTGA 60.250 55.000 2.24 0.00 0.00 3.27
3909 3960 1.517242 GGCCAGTCAAGTGTTCTGAG 58.483 55.000 0.00 0.00 0.00 3.35
3910 3961 0.871057 GCCAGTCAAGTGTTCTGAGC 59.129 55.000 0.00 0.00 0.00 4.26
3911 3962 1.811558 GCCAGTCAAGTGTTCTGAGCA 60.812 52.381 0.00 0.00 0.00 4.26
3912 3963 2.141517 CCAGTCAAGTGTTCTGAGCAG 58.858 52.381 0.00 0.00 0.00 4.24
3913 3964 2.484417 CCAGTCAAGTGTTCTGAGCAGT 60.484 50.000 0.00 0.00 0.00 4.40
3914 3965 3.243873 CCAGTCAAGTGTTCTGAGCAGTA 60.244 47.826 2.14 0.00 0.00 2.74
3915 3966 3.986572 CAGTCAAGTGTTCTGAGCAGTAG 59.013 47.826 2.14 0.00 0.00 2.57
3916 3967 3.639094 AGTCAAGTGTTCTGAGCAGTAGT 59.361 43.478 2.14 0.00 0.00 2.73
3917 3968 3.738282 GTCAAGTGTTCTGAGCAGTAGTG 59.262 47.826 2.14 0.00 0.00 2.74
3935 3986 3.225235 CTGGGCTAGCAGGACTCC 58.775 66.667 18.24 7.80 0.00 3.85
3936 3987 2.759973 TGGGCTAGCAGGACTCCG 60.760 66.667 18.24 0.00 0.00 4.63
3937 3988 3.541713 GGGCTAGCAGGACTCCGG 61.542 72.222 18.24 0.00 0.00 5.14
3938 3989 2.760385 GGCTAGCAGGACTCCGGT 60.760 66.667 18.24 0.00 0.00 5.28
3939 3990 2.496817 GCTAGCAGGACTCCGGTG 59.503 66.667 10.63 0.00 0.00 4.94
3940 3991 2.052690 GCTAGCAGGACTCCGGTGA 61.053 63.158 10.63 0.00 0.00 4.02
3941 3992 1.605058 GCTAGCAGGACTCCGGTGAA 61.605 60.000 10.63 0.00 0.00 3.18
3942 3993 0.173708 CTAGCAGGACTCCGGTGAAC 59.826 60.000 11.17 2.34 0.00 3.18
3943 3994 1.255667 TAGCAGGACTCCGGTGAACC 61.256 60.000 11.17 12.62 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 9.045223 TCTACTTTTGCACATATGATGTACATC 57.955 33.333 25.95 25.95 42.70 3.06
110 111 6.654582 ACACATGTCTACTTTTGCACATATGA 59.345 34.615 10.38 0.00 29.94 2.15
269 288 6.591313 TTTTGCCAGTATTTTTCGGTTTTC 57.409 33.333 0.00 0.00 0.00 2.29
279 299 7.440523 TTTTTGTGTGTTTTTGCCAGTATTT 57.559 28.000 0.00 0.00 0.00 1.40
334 364 0.527113 TCGCTCCGTTCGATTGGTAA 59.473 50.000 3.64 0.00 0.00 2.85
335 365 0.742505 ATCGCTCCGTTCGATTGGTA 59.257 50.000 3.64 0.00 43.27 3.25
343 373 1.872679 GTGTCCGATCGCTCCGTTC 60.873 63.158 10.32 0.00 0.00 3.95
348 378 0.248498 TCATTCGTGTCCGATCGCTC 60.248 55.000 10.32 5.20 43.80 5.03
363 393 0.666913 GATGCATGCCTTCGCTCATT 59.333 50.000 16.68 0.00 35.36 2.57
401 431 3.752339 GAACGACTACGGGCCGGT 61.752 66.667 31.78 19.71 44.46 5.28
437 467 3.210232 TGTCTCTCCGATACCGATTCT 57.790 47.619 0.00 0.00 38.22 2.40
447 477 1.569548 AGAACCCCTATGTCTCTCCGA 59.430 52.381 0.00 0.00 0.00 4.55
498 528 7.050377 CAGATTTGACTAAGGTGATGTATGGT 58.950 38.462 0.00 0.00 0.00 3.55
499 529 7.275183 TCAGATTTGACTAAGGTGATGTATGG 58.725 38.462 0.00 0.00 0.00 2.74
502 532 8.078060 TGATCAGATTTGACTAAGGTGATGTA 57.922 34.615 0.00 0.00 35.83 2.29
505 535 9.471702 AATTTGATCAGATTTGACTAAGGTGAT 57.528 29.630 5.67 0.00 35.83 3.06
509 539 9.401058 ACCTAATTTGATCAGATTTGACTAAGG 57.599 33.333 15.89 16.11 35.83 2.69
521 551 8.511604 ACCAAATACTCACCTAATTTGATCAG 57.488 34.615 8.23 0.00 41.14 2.90
537 567 5.700402 AGATGTGGCTAGAACCAAATACT 57.300 39.130 0.00 0.00 42.70 2.12
540 570 5.440610 CCTTAGATGTGGCTAGAACCAAAT 58.559 41.667 0.00 0.00 42.70 2.32
572 602 2.034685 GGGGTTCACTGCTCAGAAAAAC 59.965 50.000 3.60 4.96 0.00 2.43
614 646 6.059484 ACCGTCTAAAGGAATCTTTTCACAA 58.941 36.000 0.00 0.00 42.61 3.33
619 651 6.294010 GCTTTGACCGTCTAAAGGAATCTTTT 60.294 38.462 17.63 0.00 42.61 2.27
620 652 5.181433 GCTTTGACCGTCTAAAGGAATCTTT 59.819 40.000 17.63 0.00 44.57 2.52
633 665 1.070376 GTTAACCACGCTTTGACCGTC 60.070 52.381 0.00 0.00 36.69 4.79
636 668 3.636282 ATTGTTAACCACGCTTTGACC 57.364 42.857 2.48 0.00 0.00 4.02
644 677 8.789881 TTGAGTTGATTAAATTGTTAACCACG 57.210 30.769 2.48 0.00 32.04 4.94
679 718 9.585099 ACATTATTTTTGTCACATTTATCGCAT 57.415 25.926 0.00 0.00 0.00 4.73
725 764 8.585471 ATCAGACTGTTTGGATTGTGATTATT 57.415 30.769 1.59 0.00 0.00 1.40
729 768 5.587844 GCTATCAGACTGTTTGGATTGTGAT 59.412 40.000 1.59 0.00 0.00 3.06
745 784 0.179100 GCACTCGCCAAGCTATCAGA 60.179 55.000 0.00 0.00 0.00 3.27
747 786 0.036483 TTGCACTCGCCAAGCTATCA 60.036 50.000 0.00 0.00 37.32 2.15
748 787 1.086696 TTTGCACTCGCCAAGCTATC 58.913 50.000 0.00 0.00 37.32 2.08
754 793 3.308595 CGTATCTATTTTGCACTCGCCAA 59.691 43.478 0.00 0.00 37.32 4.52
778 817 3.070159 CCCGTGTGATATCACCAGAGATT 59.930 47.826 28.64 0.00 45.88 2.40
799 838 6.347644 GCTCAAACAAGCAATTATTTTGGACC 60.348 38.462 0.00 0.00 42.05 4.46
847 887 1.202770 ACTCGTTTGTTTGGGCTAGCT 60.203 47.619 15.72 0.00 0.00 3.32
955 995 1.472376 GGGAGAGATTTCTGTGAGGCG 60.472 57.143 0.00 0.00 32.53 5.52
1470 1510 2.750637 GAGTCGAGGAGGGCGTCA 60.751 66.667 9.66 0.00 0.00 4.35
1701 1741 1.453235 GGCCATCTGCTGCTGGATA 59.547 57.895 16.71 0.00 40.92 2.59
1719 1759 1.226974 CGTGTCCCAGATAGGCACG 60.227 63.158 3.37 3.37 44.64 5.34
1726 1766 2.021068 CTCATCGGCGTGTCCCAGAT 62.021 60.000 6.85 0.00 0.00 2.90
1821 1864 3.545124 AATTGGGCGCCGTGACTCA 62.545 57.895 22.54 8.77 0.00 3.41
2013 2056 1.009829 GCAACAGGTCAGCCTTATCG 58.990 55.000 0.00 0.00 44.18 2.92
2376 2419 1.228124 GTGCTGCCCAACACCAGTA 60.228 57.895 0.00 0.00 0.00 2.74
2601 2644 6.150976 GGTTGTTCAATATCATCACCTTCACA 59.849 38.462 0.00 0.00 0.00 3.58
2649 2692 4.386424 GCCTTGTAAAACCTATCCTCCCAT 60.386 45.833 0.00 0.00 0.00 4.00
2991 3034 1.570347 TTGATACAACACGCGGGCAC 61.570 55.000 9.12 0.00 0.00 5.01
3100 3143 7.897575 ACAAAAGAGAGCATAGACTACAAAG 57.102 36.000 0.00 0.00 0.00 2.77
3114 3157 3.937706 CAGCACATCCCTACAAAAGAGAG 59.062 47.826 0.00 0.00 0.00 3.20
3281 3324 4.388773 CCATCGGTCATTATGTCATAACCG 59.611 45.833 21.18 21.18 34.85 4.44
3295 3338 1.987855 GACCACCCTCCATCGGTCA 60.988 63.158 0.00 0.00 45.96 4.02
3314 3365 0.613777 CTCCCCGTCTAAAACCTGCT 59.386 55.000 0.00 0.00 0.00 4.24
3352 3403 5.117406 ACTGTATTCAGATTTCTTCCCCC 57.883 43.478 6.32 0.00 43.76 5.40
3353 3404 5.358160 CCAACTGTATTCAGATTTCTTCCCC 59.642 44.000 6.32 0.00 43.76 4.81
3402 3453 9.599056 TGGATATTGGGCTCAATAAATTAATCA 57.401 29.630 22.47 10.23 45.57 2.57
3414 3465 2.116869 TAGGCTGGATATTGGGCTCA 57.883 50.000 0.00 0.00 37.13 4.26
3421 3472 8.710749 TTGCTTGATAAATTAGGCTGGATATT 57.289 30.769 0.00 0.00 0.00 1.28
3422 3473 8.890410 ATTGCTTGATAAATTAGGCTGGATAT 57.110 30.769 0.00 0.00 0.00 1.63
3430 3481 7.013655 ACACTGCCTATTGCTTGATAAATTAGG 59.986 37.037 0.00 0.00 42.00 2.69
3446 3497 1.559682 CCAACACCCTACACTGCCTAT 59.440 52.381 0.00 0.00 0.00 2.57
3450 3501 0.609131 ATGCCAACACCCTACACTGC 60.609 55.000 0.00 0.00 0.00 4.40
3496 3547 1.138464 GTGACTTAGAATCGGGGTCCC 59.862 57.143 0.00 0.00 0.00 4.46
3497 3548 1.829222 TGTGACTTAGAATCGGGGTCC 59.171 52.381 0.00 0.00 0.00 4.46
3498 3549 2.418334 GGTGTGACTTAGAATCGGGGTC 60.418 54.545 0.00 0.00 0.00 4.46
3499 3550 1.553704 GGTGTGACTTAGAATCGGGGT 59.446 52.381 0.00 0.00 0.00 4.95
3500 3551 1.470979 CGGTGTGACTTAGAATCGGGG 60.471 57.143 0.00 0.00 0.00 5.73
3501 3552 1.475280 TCGGTGTGACTTAGAATCGGG 59.525 52.381 0.00 0.00 0.00 5.14
3502 3553 2.933495 TCGGTGTGACTTAGAATCGG 57.067 50.000 0.00 0.00 0.00 4.18
3503 3554 4.294416 AGATCGGTGTGACTTAGAATCG 57.706 45.455 0.00 0.00 0.00 3.34
3504 3555 5.216648 GCTAGATCGGTGTGACTTAGAATC 58.783 45.833 0.00 0.00 0.00 2.52
3505 3556 4.645136 TGCTAGATCGGTGTGACTTAGAAT 59.355 41.667 0.00 0.00 0.00 2.40
3506 3557 4.014406 TGCTAGATCGGTGTGACTTAGAA 58.986 43.478 0.00 0.00 0.00 2.10
3507 3558 3.617284 TGCTAGATCGGTGTGACTTAGA 58.383 45.455 0.00 0.00 0.00 2.10
3508 3559 4.202060 ACATGCTAGATCGGTGTGACTTAG 60.202 45.833 0.00 0.00 0.00 2.18
3509 3560 3.699538 ACATGCTAGATCGGTGTGACTTA 59.300 43.478 0.00 0.00 0.00 2.24
3510 3561 2.497675 ACATGCTAGATCGGTGTGACTT 59.502 45.455 0.00 0.00 0.00 3.01
3511 3562 2.103373 ACATGCTAGATCGGTGTGACT 58.897 47.619 0.00 0.00 0.00 3.41
3512 3563 2.586258 ACATGCTAGATCGGTGTGAC 57.414 50.000 0.00 0.00 0.00 3.67
3513 3564 3.445805 TGTTACATGCTAGATCGGTGTGA 59.554 43.478 0.00 0.00 0.00 3.58
3514 3565 3.551890 GTGTTACATGCTAGATCGGTGTG 59.448 47.826 0.00 0.00 0.00 3.82
3515 3566 3.430374 GGTGTTACATGCTAGATCGGTGT 60.430 47.826 0.00 0.00 0.00 4.16
3516 3567 3.123804 GGTGTTACATGCTAGATCGGTG 58.876 50.000 0.00 0.00 0.00 4.94
3517 3568 3.031736 AGGTGTTACATGCTAGATCGGT 58.968 45.455 0.00 0.00 0.00 4.69
3518 3569 3.068165 TGAGGTGTTACATGCTAGATCGG 59.932 47.826 0.00 0.00 0.00 4.18
3519 3570 4.307443 TGAGGTGTTACATGCTAGATCG 57.693 45.455 0.00 0.00 0.00 3.69
3520 3571 7.543868 GTGATATGAGGTGTTACATGCTAGATC 59.456 40.741 0.00 0.00 0.00 2.75
3521 3572 7.234371 AGTGATATGAGGTGTTACATGCTAGAT 59.766 37.037 0.00 0.00 0.00 1.98
3522 3573 6.551227 AGTGATATGAGGTGTTACATGCTAGA 59.449 38.462 0.00 0.00 0.00 2.43
3523 3574 6.753180 AGTGATATGAGGTGTTACATGCTAG 58.247 40.000 0.00 0.00 0.00 3.42
3524 3575 6.731292 AGTGATATGAGGTGTTACATGCTA 57.269 37.500 0.00 0.00 0.00 3.49
3525 3576 5.620738 AGTGATATGAGGTGTTACATGCT 57.379 39.130 0.00 0.00 0.00 3.79
3526 3577 6.489675 CAAAGTGATATGAGGTGTTACATGC 58.510 40.000 0.00 0.00 0.00 4.06
3527 3578 6.489675 GCAAAGTGATATGAGGTGTTACATG 58.510 40.000 0.00 0.00 0.00 3.21
3528 3579 5.294306 CGCAAAGTGATATGAGGTGTTACAT 59.706 40.000 0.00 0.00 0.00 2.29
3529 3580 4.629634 CGCAAAGTGATATGAGGTGTTACA 59.370 41.667 0.00 0.00 0.00 2.41
3530 3581 4.034048 CCGCAAAGTGATATGAGGTGTTAC 59.966 45.833 0.00 0.00 32.55 2.50
3531 3582 4.188462 CCGCAAAGTGATATGAGGTGTTA 58.812 43.478 0.00 0.00 32.55 2.41
3532 3583 3.009723 CCGCAAAGTGATATGAGGTGTT 58.990 45.455 0.00 0.00 32.55 3.32
3533 3584 2.632377 CCGCAAAGTGATATGAGGTGT 58.368 47.619 0.00 0.00 32.55 4.16
3534 3585 1.331756 GCCGCAAAGTGATATGAGGTG 59.668 52.381 0.00 0.00 38.58 4.00
3535 3586 1.668419 GCCGCAAAGTGATATGAGGT 58.332 50.000 0.00 0.00 38.58 3.85
3536 3587 0.947244 GGCCGCAAAGTGATATGAGG 59.053 55.000 0.00 0.00 39.25 3.86
3537 3588 1.869767 GAGGCCGCAAAGTGATATGAG 59.130 52.381 0.00 0.00 0.00 2.90
3538 3589 1.209261 TGAGGCCGCAAAGTGATATGA 59.791 47.619 6.75 0.00 0.00 2.15
3539 3590 1.331756 GTGAGGCCGCAAAGTGATATG 59.668 52.381 12.05 0.00 0.00 1.78
3540 3591 1.668419 GTGAGGCCGCAAAGTGATAT 58.332 50.000 12.05 0.00 0.00 1.63
3541 3592 0.739462 CGTGAGGCCGCAAAGTGATA 60.739 55.000 12.05 0.00 0.00 2.15
3542 3593 2.034879 CGTGAGGCCGCAAAGTGAT 61.035 57.895 12.05 0.00 0.00 3.06
3543 3594 2.664851 CGTGAGGCCGCAAAGTGA 60.665 61.111 12.05 0.00 0.00 3.41
3551 3602 4.508128 ATACCGTGCGTGAGGCCG 62.508 66.667 0.00 0.00 42.61 6.13
3552 3603 2.585247 GATACCGTGCGTGAGGCC 60.585 66.667 0.00 0.00 42.61 5.19
3553 3604 2.585247 GGATACCGTGCGTGAGGC 60.585 66.667 0.00 0.00 43.96 4.70
3554 3605 1.065928 GAGGATACCGTGCGTGAGG 59.934 63.158 0.00 0.00 37.17 3.86
3555 3606 0.525668 GTGAGGATACCGTGCGTGAG 60.526 60.000 0.00 0.00 37.17 3.51
3556 3607 1.509463 GTGAGGATACCGTGCGTGA 59.491 57.895 0.00 0.00 37.17 4.35
3557 3608 1.872234 CGTGAGGATACCGTGCGTG 60.872 63.158 0.00 0.00 37.17 5.34
3558 3609 2.488355 CGTGAGGATACCGTGCGT 59.512 61.111 0.00 0.00 37.17 5.24
3570 3621 1.445582 GTAAGGCGACACCCGTGAG 60.446 63.158 0.96 0.00 40.58 3.51
3571 3622 2.652530 GTAAGGCGACACCCGTGA 59.347 61.111 0.96 0.00 40.58 4.35
3572 3623 2.433664 GGTAAGGCGACACCCGTG 60.434 66.667 0.00 0.00 40.58 4.94
3573 3624 2.288025 ATGGTAAGGCGACACCCGT 61.288 57.895 0.00 0.00 40.58 5.28
3574 3625 1.813753 CATGGTAAGGCGACACCCG 60.814 63.158 0.00 0.00 40.58 5.28
3575 3626 1.451387 CCATGGTAAGGCGACACCC 60.451 63.158 2.57 0.00 40.58 4.61
3576 3627 2.112815 GCCATGGTAAGGCGACACC 61.113 63.158 14.67 0.00 43.15 4.16
3577 3628 3.497879 GCCATGGTAAGGCGACAC 58.502 61.111 14.67 0.00 43.15 3.67
3583 3634 3.093835 TCCCGGGCCATGGTAAGG 61.094 66.667 18.49 13.45 0.00 2.69
3584 3635 2.192175 GTCCCGGGCCATGGTAAG 59.808 66.667 18.49 4.56 0.00 2.34
3585 3636 3.413300 GGTCCCGGGCCATGGTAA 61.413 66.667 24.17 0.00 0.00 2.85
3589 3640 4.733542 AAACGGTCCCGGGCCATG 62.734 66.667 27.00 17.10 44.69 3.66
3590 3641 4.733542 CAAACGGTCCCGGGCCAT 62.734 66.667 27.00 14.50 44.69 4.40
3597 3648 2.852180 AAAAGGCGCAAACGGTCCC 61.852 57.895 10.83 0.00 40.57 4.46
3598 3649 1.660264 CAAAAGGCGCAAACGGTCC 60.660 57.895 10.83 0.00 40.57 4.46
3599 3650 1.660264 CCAAAAGGCGCAAACGGTC 60.660 57.895 10.83 0.00 40.57 4.79
3600 3651 2.415426 CCAAAAGGCGCAAACGGT 59.585 55.556 10.83 0.00 40.57 4.83
3601 3652 3.035503 GCCAAAAGGCGCAAACGG 61.036 61.111 10.83 3.45 40.57 4.44
3602 3653 2.016165 GAGCCAAAAGGCGCAAACG 61.016 57.895 10.83 0.00 44.07 3.60
3603 3654 1.067250 TGAGCCAAAAGGCGCAAAC 59.933 52.632 10.83 0.00 41.28 2.93
3604 3655 1.067250 GTGAGCCAAAAGGCGCAAA 59.933 52.632 14.31 0.00 45.17 3.68
3605 3656 2.727544 GTGAGCCAAAAGGCGCAA 59.272 55.556 14.31 0.00 45.17 4.85
3606 3657 2.997952 TACGTGAGCCAAAAGGCGCA 62.998 55.000 10.83 8.86 41.90 6.09
3607 3658 1.644786 ATACGTGAGCCAAAAGGCGC 61.645 55.000 0.00 0.00 40.23 6.53
3608 3659 1.647346 TATACGTGAGCCAAAAGGCG 58.353 50.000 0.00 0.00 40.23 5.52
3609 3660 3.202906 TCATATACGTGAGCCAAAAGGC 58.797 45.455 0.00 0.00 0.00 4.35
3610 3661 4.214119 CCATCATATACGTGAGCCAAAAGG 59.786 45.833 0.00 0.00 0.00 3.11
3611 3662 4.816385 ACCATCATATACGTGAGCCAAAAG 59.184 41.667 0.00 0.00 0.00 2.27
3612 3663 4.574421 CACCATCATATACGTGAGCCAAAA 59.426 41.667 0.00 0.00 0.00 2.44
3613 3664 4.126437 CACCATCATATACGTGAGCCAAA 58.874 43.478 0.00 0.00 0.00 3.28
3614 3665 3.133901 ACACCATCATATACGTGAGCCAA 59.866 43.478 0.00 0.00 0.00 4.52
3615 3666 2.698274 ACACCATCATATACGTGAGCCA 59.302 45.455 0.00 0.00 0.00 4.75
3616 3667 3.318017 GACACCATCATATACGTGAGCC 58.682 50.000 0.00 0.00 0.00 4.70
3617 3668 2.980476 CGACACCATCATATACGTGAGC 59.020 50.000 0.00 0.00 0.00 4.26
3618 3669 2.980476 GCGACACCATCATATACGTGAG 59.020 50.000 0.00 0.00 0.00 3.51
3619 3670 2.621526 AGCGACACCATCATATACGTGA 59.378 45.455 0.00 0.00 0.00 4.35
3620 3671 3.013276 AGCGACACCATCATATACGTG 57.987 47.619 0.00 0.00 0.00 4.49
3621 3672 3.819337 ACTAGCGACACCATCATATACGT 59.181 43.478 0.00 0.00 0.00 3.57
3622 3673 4.421033 ACTAGCGACACCATCATATACG 57.579 45.455 0.00 0.00 0.00 3.06
3623 3674 6.095021 TGGATACTAGCGACACCATCATATAC 59.905 42.308 0.00 0.00 37.61 1.47
3624 3675 6.184789 TGGATACTAGCGACACCATCATATA 58.815 40.000 0.00 0.00 37.61 0.86
3625 3676 5.016831 TGGATACTAGCGACACCATCATAT 58.983 41.667 0.00 0.00 37.61 1.78
3626 3677 4.403734 TGGATACTAGCGACACCATCATA 58.596 43.478 0.00 0.00 37.61 2.15
3627 3678 3.230976 TGGATACTAGCGACACCATCAT 58.769 45.455 0.00 0.00 37.61 2.45
3628 3679 2.661718 TGGATACTAGCGACACCATCA 58.338 47.619 0.00 0.00 37.61 3.07
3629 3680 3.944055 ATGGATACTAGCGACACCATC 57.056 47.619 0.00 0.00 33.63 3.51
3630 3681 5.016831 TCATATGGATACTAGCGACACCAT 58.983 41.667 2.13 0.00 40.50 3.55
3631 3682 4.217767 GTCATATGGATACTAGCGACACCA 59.782 45.833 2.13 0.00 37.61 4.17
3632 3683 4.217767 TGTCATATGGATACTAGCGACACC 59.782 45.833 2.13 0.00 37.61 4.16
3633 3684 5.181433 TCTGTCATATGGATACTAGCGACAC 59.819 44.000 2.13 0.00 37.61 3.67
3634 3685 5.313712 TCTGTCATATGGATACTAGCGACA 58.686 41.667 2.13 0.00 37.61 4.35
3635 3686 5.644206 TCTCTGTCATATGGATACTAGCGAC 59.356 44.000 2.13 0.00 37.61 5.19
3636 3687 5.805728 TCTCTGTCATATGGATACTAGCGA 58.194 41.667 2.13 0.00 37.61 4.93
3637 3688 6.318628 GTTCTCTGTCATATGGATACTAGCG 58.681 44.000 2.13 0.00 37.61 4.26
3638 3689 6.350612 GGGTTCTCTGTCATATGGATACTAGC 60.351 46.154 2.13 0.00 37.61 3.42
3639 3690 6.127869 CGGGTTCTCTGTCATATGGATACTAG 60.128 46.154 2.13 0.00 37.61 2.57
3640 3691 5.710567 CGGGTTCTCTGTCATATGGATACTA 59.289 44.000 2.13 0.00 37.61 1.82
3641 3692 4.524714 CGGGTTCTCTGTCATATGGATACT 59.475 45.833 2.13 0.00 37.61 2.12
3642 3693 4.322049 CCGGGTTCTCTGTCATATGGATAC 60.322 50.000 2.13 0.00 0.00 2.24
3643 3694 3.832490 CCGGGTTCTCTGTCATATGGATA 59.168 47.826 2.13 0.00 0.00 2.59
3644 3695 2.634940 CCGGGTTCTCTGTCATATGGAT 59.365 50.000 2.13 0.00 0.00 3.41
3645 3696 2.039418 CCGGGTTCTCTGTCATATGGA 58.961 52.381 2.13 0.00 0.00 3.41
3646 3697 1.070758 CCCGGGTTCTCTGTCATATGG 59.929 57.143 14.18 0.00 0.00 2.74
3647 3698 1.541233 GCCCGGGTTCTCTGTCATATG 60.541 57.143 24.63 0.00 0.00 1.78
3648 3699 0.759346 GCCCGGGTTCTCTGTCATAT 59.241 55.000 24.63 0.00 0.00 1.78
3649 3700 1.335132 GGCCCGGGTTCTCTGTCATA 61.335 60.000 24.63 0.00 0.00 2.15
3650 3701 2.670148 GGCCCGGGTTCTCTGTCAT 61.670 63.158 24.63 0.00 0.00 3.06
3651 3702 3.319198 GGCCCGGGTTCTCTGTCA 61.319 66.667 24.63 0.00 0.00 3.58
3652 3703 4.452733 CGGCCCGGGTTCTCTGTC 62.453 72.222 24.63 1.42 0.00 3.51
3654 3705 4.452733 GTCGGCCCGGGTTCTCTG 62.453 72.222 24.63 10.59 0.00 3.35
3655 3706 2.866523 TATGTCGGCCCGGGTTCTCT 62.867 60.000 24.63 5.58 0.00 3.10
3656 3707 2.365095 CTATGTCGGCCCGGGTTCTC 62.365 65.000 24.63 11.43 0.00 2.87
3657 3708 2.364579 TATGTCGGCCCGGGTTCT 60.365 61.111 24.63 3.83 0.00 3.01
3658 3709 2.108362 CTATGTCGGCCCGGGTTC 59.892 66.667 24.63 14.17 0.00 3.62
3659 3710 4.171103 GCTATGTCGGCCCGGGTT 62.171 66.667 24.63 2.88 0.00 4.11
3660 3711 3.744003 TAGCTATGTCGGCCCGGGT 62.744 63.158 24.63 2.66 0.00 5.28
3661 3712 2.915659 TAGCTATGTCGGCCCGGG 60.916 66.667 19.09 19.09 0.00 5.73
3662 3713 2.143594 GACTAGCTATGTCGGCCCGG 62.144 65.000 1.90 0.00 0.00 5.73
3663 3714 1.286260 GACTAGCTATGTCGGCCCG 59.714 63.158 0.00 0.00 0.00 6.13
3669 3720 2.426024 TGGGTTCACGACTAGCTATGTC 59.574 50.000 11.25 11.25 0.00 3.06
3670 3721 2.453521 TGGGTTCACGACTAGCTATGT 58.546 47.619 0.00 0.00 0.00 2.29
3671 3722 3.520290 TTGGGTTCACGACTAGCTATG 57.480 47.619 0.00 0.00 0.00 2.23
3672 3723 3.679083 GCTTTGGGTTCACGACTAGCTAT 60.679 47.826 0.00 0.00 0.00 2.97
3673 3724 2.353406 GCTTTGGGTTCACGACTAGCTA 60.353 50.000 0.00 0.00 0.00 3.32
3674 3725 1.608283 GCTTTGGGTTCACGACTAGCT 60.608 52.381 0.00 0.00 0.00 3.32
3675 3726 0.796927 GCTTTGGGTTCACGACTAGC 59.203 55.000 0.00 0.00 0.00 3.42
3676 3727 1.068474 CGCTTTGGGTTCACGACTAG 58.932 55.000 0.00 0.00 0.00 2.57
3677 3728 0.320073 CCGCTTTGGGTTCACGACTA 60.320 55.000 0.00 0.00 0.00 2.59
3678 3729 1.597027 CCGCTTTGGGTTCACGACT 60.597 57.895 0.00 0.00 0.00 4.18
3679 3730 2.943653 CCGCTTTGGGTTCACGAC 59.056 61.111 0.00 0.00 0.00 4.34
3680 3731 2.975799 GCCGCTTTGGGTTCACGA 60.976 61.111 0.00 0.00 38.63 4.35
3681 3732 3.283684 TGCCGCTTTGGGTTCACG 61.284 61.111 0.00 0.00 38.63 4.35
3682 3733 2.335011 GTGCCGCTTTGGGTTCAC 59.665 61.111 0.00 0.00 38.63 3.18
3683 3734 2.124109 TGTGCCGCTTTGGGTTCA 60.124 55.556 0.00 0.00 38.63 3.18
3684 3735 1.896660 TCTGTGCCGCTTTGGGTTC 60.897 57.895 0.00 0.00 38.63 3.62
3685 3736 2.193536 GTCTGTGCCGCTTTGGGTT 61.194 57.895 0.00 0.00 38.63 4.11
3686 3737 2.594592 GTCTGTGCCGCTTTGGGT 60.595 61.111 0.00 0.00 38.63 4.51
3687 3738 2.463589 TAGGTCTGTGCCGCTTTGGG 62.464 60.000 0.00 0.00 38.63 4.12
3688 3739 0.392998 ATAGGTCTGTGCCGCTTTGG 60.393 55.000 0.00 0.00 42.50 3.28
3689 3740 0.729116 CATAGGTCTGTGCCGCTTTG 59.271 55.000 0.00 0.00 0.00 2.77
3690 3741 0.392998 CCATAGGTCTGTGCCGCTTT 60.393 55.000 0.00 0.00 0.00 3.51
3691 3742 1.221840 CCATAGGTCTGTGCCGCTT 59.778 57.895 0.00 0.00 0.00 4.68
3692 3743 1.680522 CTCCATAGGTCTGTGCCGCT 61.681 60.000 0.00 0.00 0.00 5.52
3693 3744 1.227380 CTCCATAGGTCTGTGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
3694 3745 0.103208 GTCTCCATAGGTCTGTGCCG 59.897 60.000 0.00 0.00 0.00 5.69
3695 3746 1.137872 CTGTCTCCATAGGTCTGTGCC 59.862 57.143 0.00 0.00 0.00 5.01
3696 3747 1.137872 CCTGTCTCCATAGGTCTGTGC 59.862 57.143 0.00 0.00 0.00 4.57
3697 3748 1.137872 GCCTGTCTCCATAGGTCTGTG 59.862 57.143 0.00 0.00 36.44 3.66
3698 3749 1.273267 TGCCTGTCTCCATAGGTCTGT 60.273 52.381 0.00 0.00 36.44 3.41
3699 3750 1.489481 TGCCTGTCTCCATAGGTCTG 58.511 55.000 0.00 0.00 36.44 3.51
3700 3751 2.485966 ATGCCTGTCTCCATAGGTCT 57.514 50.000 0.00 0.00 36.44 3.85
3701 3752 2.965831 TGTATGCCTGTCTCCATAGGTC 59.034 50.000 0.00 0.00 36.44 3.85
3702 3753 3.046283 TGTATGCCTGTCTCCATAGGT 57.954 47.619 0.00 0.00 36.44 3.08
3703 3754 3.580022 TCATGTATGCCTGTCTCCATAGG 59.420 47.826 0.00 0.00 37.14 2.57
3704 3755 4.879197 TCATGTATGCCTGTCTCCATAG 57.121 45.455 0.00 0.00 0.00 2.23
3705 3756 5.307716 TGATTCATGTATGCCTGTCTCCATA 59.692 40.000 0.00 0.00 0.00 2.74
3706 3757 4.103627 TGATTCATGTATGCCTGTCTCCAT 59.896 41.667 0.00 0.00 0.00 3.41
3707 3758 3.455543 TGATTCATGTATGCCTGTCTCCA 59.544 43.478 0.00 0.00 0.00 3.86
3708 3759 3.812053 GTGATTCATGTATGCCTGTCTCC 59.188 47.826 0.00 0.00 0.00 3.71
3709 3760 4.445453 TGTGATTCATGTATGCCTGTCTC 58.555 43.478 0.00 0.00 0.00 3.36
3710 3761 4.492494 TGTGATTCATGTATGCCTGTCT 57.508 40.909 0.00 0.00 0.00 3.41
3711 3762 4.214971 GGATGTGATTCATGTATGCCTGTC 59.785 45.833 0.00 0.00 36.83 3.51
3712 3763 4.139786 GGATGTGATTCATGTATGCCTGT 58.860 43.478 0.00 0.00 36.83 4.00
3713 3764 4.139038 TGGATGTGATTCATGTATGCCTG 58.861 43.478 0.00 0.00 36.83 4.85
3714 3765 4.395625 CTGGATGTGATTCATGTATGCCT 58.604 43.478 0.00 0.00 36.83 4.75
3715 3766 3.057736 GCTGGATGTGATTCATGTATGCC 60.058 47.826 0.00 0.00 36.83 4.40
3716 3767 3.566742 TGCTGGATGTGATTCATGTATGC 59.433 43.478 0.00 0.00 36.83 3.14
3717 3768 5.240844 ACATGCTGGATGTGATTCATGTATG 59.759 40.000 14.25 0.00 44.12 2.39
3718 3769 5.382616 ACATGCTGGATGTGATTCATGTAT 58.617 37.500 14.25 0.00 44.12 2.29
3719 3770 4.784177 ACATGCTGGATGTGATTCATGTA 58.216 39.130 14.25 0.00 44.12 2.29
3720 3771 3.628008 ACATGCTGGATGTGATTCATGT 58.372 40.909 14.25 0.31 44.12 3.21
3721 3772 3.303791 CGACATGCTGGATGTGATTCATG 60.304 47.826 19.78 2.33 45.90 3.07
3722 3773 2.876550 CGACATGCTGGATGTGATTCAT 59.123 45.455 19.78 0.00 45.90 2.57
3723 3774 2.282407 CGACATGCTGGATGTGATTCA 58.718 47.619 19.78 0.00 45.90 2.57
3724 3775 1.600957 CCGACATGCTGGATGTGATTC 59.399 52.381 19.78 4.22 45.90 2.52
3725 3776 1.065199 ACCGACATGCTGGATGTGATT 60.065 47.619 19.78 0.17 45.90 2.57
3726 3777 0.543277 ACCGACATGCTGGATGTGAT 59.457 50.000 19.78 1.85 45.90 3.06
3727 3778 0.108186 GACCGACATGCTGGATGTGA 60.108 55.000 19.78 0.00 45.90 3.58
3728 3779 0.391528 TGACCGACATGCTGGATGTG 60.392 55.000 19.78 8.65 45.90 3.21
3730 3781 0.729116 GTTGACCGACATGCTGGATG 59.271 55.000 7.67 7.67 38.15 3.51
3731 3782 0.324614 TGTTGACCGACATGCTGGAT 59.675 50.000 10.59 0.00 0.00 3.41
3732 3783 0.320683 CTGTTGACCGACATGCTGGA 60.321 55.000 10.59 0.00 0.00 3.86
3733 3784 1.915614 GCTGTTGACCGACATGCTGG 61.916 60.000 2.37 2.37 0.00 4.85
3734 3785 1.499056 GCTGTTGACCGACATGCTG 59.501 57.895 0.00 0.00 0.00 4.41
3735 3786 2.029288 CGCTGTTGACCGACATGCT 61.029 57.895 0.00 0.00 0.00 3.79
3736 3787 1.011968 TACGCTGTTGACCGACATGC 61.012 55.000 0.00 0.00 0.00 4.06
3737 3788 1.324435 CATACGCTGTTGACCGACATG 59.676 52.381 0.00 0.00 0.00 3.21
3738 3789 1.203758 TCATACGCTGTTGACCGACAT 59.796 47.619 0.00 0.00 0.00 3.06
3739 3790 0.599060 TCATACGCTGTTGACCGACA 59.401 50.000 0.00 0.00 0.00 4.35
3740 3791 1.705256 TTCATACGCTGTTGACCGAC 58.295 50.000 0.00 0.00 0.00 4.79
3741 3792 2.536365 GATTCATACGCTGTTGACCGA 58.464 47.619 0.00 0.00 0.00 4.69
3742 3793 1.593006 GGATTCATACGCTGTTGACCG 59.407 52.381 0.00 0.00 0.00 4.79
3743 3794 2.609459 CTGGATTCATACGCTGTTGACC 59.391 50.000 0.00 0.00 0.00 4.02
3744 3795 2.609459 CCTGGATTCATACGCTGTTGAC 59.391 50.000 0.00 0.00 0.00 3.18
3745 3796 2.905075 CCTGGATTCATACGCTGTTGA 58.095 47.619 0.00 0.00 0.00 3.18
3746 3797 1.331756 GCCTGGATTCATACGCTGTTG 59.668 52.381 0.00 0.00 0.00 3.33
3747 3798 1.210478 AGCCTGGATTCATACGCTGTT 59.790 47.619 0.00 0.00 0.00 3.16
3748 3799 0.833287 AGCCTGGATTCATACGCTGT 59.167 50.000 0.00 0.00 0.00 4.40
3749 3800 1.224075 CAGCCTGGATTCATACGCTG 58.776 55.000 0.00 4.07 37.93 5.18
3750 3801 0.833287 ACAGCCTGGATTCATACGCT 59.167 50.000 0.00 0.00 0.00 5.07
3751 3802 2.408050 CTACAGCCTGGATTCATACGC 58.592 52.381 0.00 0.00 0.00 4.42
3752 3803 2.224042 TGCTACAGCCTGGATTCATACG 60.224 50.000 0.00 0.00 41.18 3.06
3753 3804 3.134458 GTGCTACAGCCTGGATTCATAC 58.866 50.000 0.00 0.00 41.18 2.39
3754 3805 3.041211 AGTGCTACAGCCTGGATTCATA 58.959 45.455 0.00 0.00 41.18 2.15
3755 3806 1.842562 AGTGCTACAGCCTGGATTCAT 59.157 47.619 0.00 0.00 41.18 2.57
3756 3807 1.065926 CAGTGCTACAGCCTGGATTCA 60.066 52.381 0.00 0.00 41.18 2.57
3757 3808 1.661341 CAGTGCTACAGCCTGGATTC 58.339 55.000 0.00 0.00 41.18 2.52
3758 3809 3.869623 CAGTGCTACAGCCTGGATT 57.130 52.632 0.00 0.00 41.18 3.01
3762 3813 2.437359 GCCCAGTGCTACAGCCTG 60.437 66.667 10.84 10.84 41.18 4.85
3771 3822 0.391793 GAGTCCTGTTAGCCCAGTGC 60.392 60.000 0.00 0.00 41.71 4.40
3772 3823 0.250513 GGAGTCCTGTTAGCCCAGTG 59.749 60.000 0.41 0.00 0.00 3.66
3773 3824 1.258445 CGGAGTCCTGTTAGCCCAGT 61.258 60.000 7.77 0.00 0.00 4.00
3774 3825 1.517832 CGGAGTCCTGTTAGCCCAG 59.482 63.158 7.77 0.00 0.00 4.45
3775 3826 1.987855 CCGGAGTCCTGTTAGCCCA 60.988 63.158 7.77 0.00 0.00 5.36
3776 3827 2.732619 CCCGGAGTCCTGTTAGCCC 61.733 68.421 0.73 0.00 0.00 5.19
3777 3828 2.732619 CCCCGGAGTCCTGTTAGCC 61.733 68.421 0.73 0.00 0.00 3.93
3778 3829 1.262640 TTCCCCGGAGTCCTGTTAGC 61.263 60.000 0.73 0.00 0.00 3.09
3779 3830 0.535797 GTTCCCCGGAGTCCTGTTAG 59.464 60.000 0.73 0.00 0.00 2.34
3780 3831 0.906282 GGTTCCCCGGAGTCCTGTTA 60.906 60.000 0.73 0.00 0.00 2.41
3781 3832 2.222013 GGTTCCCCGGAGTCCTGTT 61.222 63.158 0.73 0.00 0.00 3.16
3782 3833 2.606826 GGTTCCCCGGAGTCCTGT 60.607 66.667 0.73 0.00 0.00 4.00
3783 3834 3.400054 GGGTTCCCCGGAGTCCTG 61.400 72.222 0.73 0.00 32.13 3.86
3792 3843 3.793888 CTACAGCCCGGGTTCCCC 61.794 72.222 24.63 4.30 41.09 4.81
3793 3844 4.484872 GCTACAGCCCGGGTTCCC 62.485 72.222 24.63 4.76 34.31 3.97
3794 3845 3.682292 CTGCTACAGCCCGGGTTCC 62.682 68.421 24.63 5.20 41.18 3.62
3795 3846 2.125106 CTGCTACAGCCCGGGTTC 60.125 66.667 24.63 6.10 41.18 3.62
3796 3847 3.717294 CCTGCTACAGCCCGGGTT 61.717 66.667 24.63 15.04 41.18 4.11
3799 3850 3.154473 TAGCCTGCTACAGCCCGG 61.154 66.667 0.00 0.00 41.18 5.73
3800 3851 2.419198 CTAGCCTGCTACAGCCCG 59.581 66.667 0.00 0.00 41.18 6.13
3801 3852 2.825264 CCTAGCCTGCTACAGCCC 59.175 66.667 0.00 0.00 41.18 5.19
3802 3853 2.110006 GCCTAGCCTGCTACAGCC 59.890 66.667 0.00 0.00 41.18 4.85
3803 3854 1.227497 CTGCCTAGCCTGCTACAGC 60.227 63.158 8.72 8.72 42.50 4.40
3804 3855 1.045350 TCCTGCCTAGCCTGCTACAG 61.045 60.000 8.90 8.90 0.00 2.74
3805 3856 1.001631 TCCTGCCTAGCCTGCTACA 59.998 57.895 0.00 0.00 0.00 2.74
3806 3857 1.045911 AGTCCTGCCTAGCCTGCTAC 61.046 60.000 0.00 0.00 0.00 3.58
3807 3858 0.757188 GAGTCCTGCCTAGCCTGCTA 60.757 60.000 0.00 0.00 0.00 3.49
3808 3859 2.040278 AGTCCTGCCTAGCCTGCT 59.960 61.111 0.00 0.00 0.00 4.24
3809 3860 2.503546 GAGTCCTGCCTAGCCTGC 59.496 66.667 0.00 0.00 0.00 4.85
3810 3861 2.790791 CGGAGTCCTGCCTAGCCTG 61.791 68.421 7.77 0.00 0.00 4.85
3811 3862 2.443016 CGGAGTCCTGCCTAGCCT 60.443 66.667 7.77 0.00 0.00 4.58
3812 3863 3.541713 CCGGAGTCCTGCCTAGCC 61.542 72.222 7.77 0.00 0.00 3.93
3813 3864 2.022240 CTTCCGGAGTCCTGCCTAGC 62.022 65.000 3.34 0.00 0.00 3.42
3814 3865 0.684805 ACTTCCGGAGTCCTGCCTAG 60.685 60.000 3.34 0.00 31.20 3.02
3815 3866 1.386945 ACTTCCGGAGTCCTGCCTA 59.613 57.895 3.34 0.00 31.20 3.93
3816 3867 2.120718 ACTTCCGGAGTCCTGCCT 59.879 61.111 3.34 0.00 31.20 4.75
3833 3884 1.669760 GGGAAATGTCACGCGGTGA 60.670 57.895 12.47 9.29 40.50 4.02
3834 3885 2.686816 GGGGAAATGTCACGCGGTG 61.687 63.158 12.47 6.71 34.45 4.94
3835 3886 2.359478 GGGGAAATGTCACGCGGT 60.359 61.111 12.47 0.00 0.00 5.68
3836 3887 3.496131 CGGGGAAATGTCACGCGG 61.496 66.667 12.47 0.00 36.99 6.46
3837 3888 1.966493 CTTCGGGGAAATGTCACGCG 61.966 60.000 3.53 3.53 41.16 6.01
3838 3889 1.644786 CCTTCGGGGAAATGTCACGC 61.645 60.000 0.00 0.00 37.23 5.34
3839 3890 2.466867 CCTTCGGGGAAATGTCACG 58.533 57.895 0.00 0.00 37.23 4.35
3850 3901 2.605257 TCCTATGTATGTCCCTTCGGG 58.395 52.381 0.00 0.00 46.11 5.14
3851 3902 3.552273 CGTTCCTATGTATGTCCCTTCGG 60.552 52.174 0.00 0.00 0.00 4.30
3852 3903 3.317149 TCGTTCCTATGTATGTCCCTTCG 59.683 47.826 0.00 0.00 0.00 3.79
3853 3904 4.931661 TCGTTCCTATGTATGTCCCTTC 57.068 45.455 0.00 0.00 0.00 3.46
3854 3905 4.715297 ACTTCGTTCCTATGTATGTCCCTT 59.285 41.667 0.00 0.00 0.00 3.95
3855 3906 4.099573 CACTTCGTTCCTATGTATGTCCCT 59.900 45.833 0.00 0.00 0.00 4.20
3856 3907 4.369182 CACTTCGTTCCTATGTATGTCCC 58.631 47.826 0.00 0.00 0.00 4.46
3857 3908 4.098960 TCCACTTCGTTCCTATGTATGTCC 59.901 45.833 0.00 0.00 0.00 4.02
3858 3909 5.258456 TCCACTTCGTTCCTATGTATGTC 57.742 43.478 0.00 0.00 0.00 3.06
3859 3910 5.046878 TGTTCCACTTCGTTCCTATGTATGT 60.047 40.000 0.00 0.00 0.00 2.29
3860 3911 5.291128 GTGTTCCACTTCGTTCCTATGTATG 59.709 44.000 0.00 0.00 0.00 2.39
3861 3912 5.046878 TGTGTTCCACTTCGTTCCTATGTAT 60.047 40.000 0.00 0.00 35.11 2.29
3862 3913 4.281435 TGTGTTCCACTTCGTTCCTATGTA 59.719 41.667 0.00 0.00 35.11 2.29
3863 3914 3.070446 TGTGTTCCACTTCGTTCCTATGT 59.930 43.478 0.00 0.00 35.11 2.29
3864 3915 3.659786 TGTGTTCCACTTCGTTCCTATG 58.340 45.455 0.00 0.00 35.11 2.23
3865 3916 4.253685 CATGTGTTCCACTTCGTTCCTAT 58.746 43.478 0.00 0.00 35.11 2.57
3866 3917 3.659786 CATGTGTTCCACTTCGTTCCTA 58.340 45.455 0.00 0.00 35.11 2.94
3867 3918 2.494059 CATGTGTTCCACTTCGTTCCT 58.506 47.619 0.00 0.00 35.11 3.36
3868 3919 1.069227 GCATGTGTTCCACTTCGTTCC 60.069 52.381 0.00 0.00 35.11 3.62
3869 3920 1.069227 GGCATGTGTTCCACTTCGTTC 60.069 52.381 0.00 0.00 35.11 3.95
3870 3921 0.951558 GGCATGTGTTCCACTTCGTT 59.048 50.000 0.00 0.00 35.11 3.85
3871 3922 1.227999 CGGCATGTGTTCCACTTCGT 61.228 55.000 0.00 0.00 35.11 3.85
3872 3923 1.497278 CGGCATGTGTTCCACTTCG 59.503 57.895 0.00 0.00 35.11 3.79
3873 3924 1.875963 CCGGCATGTGTTCCACTTC 59.124 57.895 0.00 0.00 35.11 3.01
3874 3925 2.268076 GCCGGCATGTGTTCCACTT 61.268 57.895 24.80 0.00 35.11 3.16
3875 3926 2.672996 GCCGGCATGTGTTCCACT 60.673 61.111 24.80 0.00 35.11 4.00
3876 3927 3.747976 GGCCGGCATGTGTTCCAC 61.748 66.667 30.85 1.84 34.56 4.02
3877 3928 4.277009 TGGCCGGCATGTGTTCCA 62.277 61.111 30.85 11.59 0.00 3.53
3878 3929 3.443045 CTGGCCGGCATGTGTTCC 61.443 66.667 30.85 8.62 0.00 3.62
3879 3930 2.672996 ACTGGCCGGCATGTGTTC 60.673 61.111 30.85 9.47 0.00 3.18
3880 3931 2.672996 GACTGGCCGGCATGTGTT 60.673 61.111 30.85 5.22 0.00 3.32
3881 3932 3.490031 TTGACTGGCCGGCATGTGT 62.490 57.895 30.85 19.91 0.00 3.72
3882 3933 2.672651 TTGACTGGCCGGCATGTG 60.673 61.111 30.85 16.68 0.00 3.21
3883 3934 2.360350 CTTGACTGGCCGGCATGT 60.360 61.111 30.85 25.31 0.00 3.21
3884 3935 2.360350 ACTTGACTGGCCGGCATG 60.360 61.111 30.85 22.03 0.00 4.06
3885 3936 2.360350 CACTTGACTGGCCGGCAT 60.360 61.111 30.85 13.53 0.00 4.40
3886 3937 3.414136 AACACTTGACTGGCCGGCA 62.414 57.895 30.85 13.75 0.00 5.69
3887 3938 2.594592 AACACTTGACTGGCCGGC 60.595 61.111 21.18 21.18 0.00 6.13
3888 3939 1.071471 AGAACACTTGACTGGCCGG 59.929 57.895 11.02 11.02 0.00 6.13
3889 3940 0.249868 TCAGAACACTTGACTGGCCG 60.250 55.000 0.00 0.00 33.19 6.13
3890 3941 1.517242 CTCAGAACACTTGACTGGCC 58.483 55.000 0.00 0.00 33.19 5.36
3891 3942 0.871057 GCTCAGAACACTTGACTGGC 59.129 55.000 0.00 0.00 33.19 4.85
3892 3943 2.141517 CTGCTCAGAACACTTGACTGG 58.858 52.381 0.00 0.00 33.19 4.00
3893 3944 2.831333 ACTGCTCAGAACACTTGACTG 58.169 47.619 3.60 0.00 0.00 3.51
3894 3945 3.639094 ACTACTGCTCAGAACACTTGACT 59.361 43.478 3.60 0.00 0.00 3.41
3895 3946 3.738282 CACTACTGCTCAGAACACTTGAC 59.262 47.826 3.60 0.00 0.00 3.18
3896 3947 3.800261 GCACTACTGCTCAGAACACTTGA 60.800 47.826 3.60 0.00 40.63 3.02
3897 3948 2.478134 GCACTACTGCTCAGAACACTTG 59.522 50.000 3.60 0.00 40.63 3.16
3898 3949 2.760374 GCACTACTGCTCAGAACACTT 58.240 47.619 3.60 0.00 40.63 3.16
3899 3950 2.447244 GCACTACTGCTCAGAACACT 57.553 50.000 3.60 0.00 40.63 3.55
3909 3960 4.844420 CTAGCCCAGCACTACTGC 57.156 61.111 0.00 0.00 45.78 4.40
3918 3969 2.790791 CGGAGTCCTGCTAGCCCAG 61.791 68.421 13.29 3.40 0.00 4.45
3919 3970 2.759973 CGGAGTCCTGCTAGCCCA 60.760 66.667 13.29 0.00 0.00 5.36
3920 3971 3.541713 CCGGAGTCCTGCTAGCCC 61.542 72.222 13.29 3.65 0.00 5.19
3921 3972 2.760385 ACCGGAGTCCTGCTAGCC 60.760 66.667 9.46 0.00 0.00 3.93
3922 3973 1.605058 TTCACCGGAGTCCTGCTAGC 61.605 60.000 9.46 8.10 0.00 3.42
3923 3974 0.173708 GTTCACCGGAGTCCTGCTAG 59.826 60.000 9.46 0.00 0.00 3.42
3924 3975 1.255667 GGTTCACCGGAGTCCTGCTA 61.256 60.000 9.46 0.00 0.00 3.49
3925 3976 2.584391 GGTTCACCGGAGTCCTGCT 61.584 63.158 9.46 0.00 0.00 4.24
3926 3977 2.047179 GGTTCACCGGAGTCCTGC 60.047 66.667 9.46 0.00 0.00 4.85



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.