Multiple sequence alignment - TraesCS6A01G284800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G284800 chr6A 100.000 7522 0 0 1 7522 516261965 516254444 0.000000e+00 13891.0
1 TraesCS6A01G284800 chr6A 85.455 110 14 2 6046 6155 254835925 254835818 6.170000e-21 113.0
2 TraesCS6A01G284800 chr6D 94.886 2190 83 10 147 2326 374129862 374127692 0.000000e+00 3397.0
3 TraesCS6A01G284800 chr6D 95.810 1599 56 6 3101 4697 374126862 374125273 0.000000e+00 2571.0
4 TraesCS6A01G284800 chr6D 94.677 1240 51 11 4607 5832 374125214 374123976 0.000000e+00 1910.0
5 TraesCS6A01G284800 chr6D 90.448 1162 72 13 5829 6987 374123718 374122593 0.000000e+00 1495.0
6 TraesCS6A01G284800 chr6D 96.296 324 10 2 2764 3087 365722850 365722529 1.440000e-146 531.0
7 TraesCS6A01G284800 chr6D 86.147 462 37 14 7029 7473 374122164 374121713 2.460000e-129 473.0
8 TraesCS6A01G284800 chr6D 95.789 285 9 2 2354 2636 374127694 374127411 2.470000e-124 457.0
9 TraesCS6A01G284800 chr6D 90.777 206 19 0 1326 1531 460156497 460156702 7.430000e-70 276.0
10 TraesCS6A01G284800 chr6D 83.636 110 15 2 6047 6156 128074559 128074665 4.800000e-17 100.0
11 TraesCS6A01G284800 chr6D 82.727 110 17 2 6047 6156 215684048 215684155 6.210000e-16 97.1
12 TraesCS6A01G284800 chr6D 86.667 90 9 3 6062 6150 388973947 388973860 6.210000e-16 97.1
13 TraesCS6A01G284800 chr6D 82.727 110 18 1 6047 6156 454820676 454820568 6.210000e-16 97.1
14 TraesCS6A01G284800 chr6D 82.727 110 16 3 6047 6156 16776076 16776182 2.230000e-15 95.3
15 TraesCS6A01G284800 chr6B 94.710 2174 90 9 160 2326 561294007 561291852 0.000000e+00 3354.0
16 TraesCS6A01G284800 chr6B 95.250 1600 63 7 3102 4697 561291428 561289838 0.000000e+00 2521.0
17 TraesCS6A01G284800 chr6B 93.533 1237 56 13 4607 5829 561289779 561288553 0.000000e+00 1820.0
18 TraesCS6A01G284800 chr6B 91.411 1269 64 16 5829 7092 561288287 561287059 0.000000e+00 1698.0
19 TraesCS6A01G284800 chr6B 95.333 450 17 3 7077 7522 561287038 561286589 0.000000e+00 712.0
20 TraesCS6A01G284800 chr6B 95.975 323 11 2 2761 3083 368341688 368341368 2.400000e-144 523.0
21 TraesCS6A01G284800 chr6B 95.679 324 12 2 2762 3085 594422488 594422167 3.110000e-143 520.0
22 TraesCS6A01G284800 chr6B 85.542 415 39 14 2354 2765 561291854 561291458 1.510000e-111 414.0
23 TraesCS6A01G284800 chr5A 89.209 556 52 4 4075 4623 613927151 613927705 0.000000e+00 688.0
24 TraesCS6A01G284800 chr5A 83.784 518 53 10 4120 4621 504009690 504010192 5.320000e-126 462.0
25 TraesCS6A01G284800 chr5A 88.158 304 32 4 4485 4787 504010193 504010493 7.180000e-95 359.0
26 TraesCS6A01G284800 chr5A 96.575 146 4 1 1 145 561476149 561476004 2.710000e-59 241.0
27 TraesCS6A01G284800 chr7A 88.288 555 54 6 4075 4620 628830753 628830201 0.000000e+00 654.0
28 TraesCS6A01G284800 chr7A 84.534 569 61 16 4029 4593 732068019 732068564 8.590000e-149 538.0
29 TraesCS6A01G284800 chr7A 86.646 322 36 5 4486 4803 628830198 628829880 4.320000e-92 350.0
30 TraesCS6A01G284800 chr7A 89.947 189 18 1 3652 3839 732067826 732068014 7.540000e-60 243.0
31 TraesCS6A01G284800 chr7A 96.503 143 4 1 1 142 252144055 252144197 1.260000e-57 235.0
32 TraesCS6A01G284800 chr7A 85.470 117 14 3 6039 6155 726050259 726050372 1.330000e-22 119.0
33 TraesCS6A01G284800 chr7A 85.470 117 14 3 6039 6155 726132249 726132362 1.330000e-22 119.0
34 TraesCS6A01G284800 chr7A 85.345 116 14 3 6042 6156 40530538 40530425 4.770000e-22 117.0
35 TraesCS6A01G284800 chr7A 85.088 114 14 3 6042 6155 465760600 465760710 6.170000e-21 113.0
36 TraesCS6A01G284800 chr7A 84.615 117 15 3 6039 6155 726262839 726262952 6.170000e-21 113.0
37 TraesCS6A01G284800 chr7A 84.615 117 15 3 6039 6155 726333560 726333673 6.170000e-21 113.0
38 TraesCS6A01G284800 chr1D 96.353 329 10 2 2756 3084 171745073 171745399 2.390000e-149 540.0
39 TraesCS6A01G284800 chr1D 86.687 323 35 6 4485 4803 468134563 468134245 1.200000e-92 351.0
40 TraesCS6A01G284800 chr1D 90.196 255 24 1 4367 4621 468134817 468134564 1.560000e-86 331.0
41 TraesCS6A01G284800 chr1D 85.830 247 26 5 4122 4359 468135104 468134858 3.480000e-63 254.0
42 TraesCS6A01G284800 chr1D 86.598 97 11 2 6059 6155 76971200 76971106 1.030000e-18 106.0
43 TraesCS6A01G284800 chr1D 83.636 110 15 2 6047 6156 445253359 445253465 4.800000e-17 100.0
44 TraesCS6A01G284800 chr1D 81.818 121 18 4 6038 6156 222025244 222025362 1.730000e-16 99.0
45 TraesCS6A01G284800 chr1B 96.885 321 8 2 2764 3084 230032759 230032441 3.090000e-148 536.0
46 TraesCS6A01G284800 chr1B 86.239 109 13 2 6047 6155 591027875 591027769 4.770000e-22 117.0
47 TraesCS6A01G284800 chr1B 85.321 109 16 0 6047 6155 12835103 12835211 6.170000e-21 113.0
48 TraesCS6A01G284800 chr1B 86.538 104 11 3 6047 6150 77550652 77550552 2.220000e-20 111.0
49 TraesCS6A01G284800 chr5D 96.319 326 10 2 2760 3085 554400755 554400432 1.110000e-147 534.0
50 TraesCS6A01G284800 chr5D 91.489 94 6 2 4303 4395 482500949 482501041 2.200000e-25 128.0
51 TraesCS6A01G284800 chr5D 87.736 106 13 0 4949 5054 482518566 482518671 2.850000e-24 124.0
52 TraesCS6A01G284800 chr7B 96.037 328 11 2 2761 3088 106574890 106574565 4.000000e-147 532.0
53 TraesCS6A01G284800 chr7B 87.770 139 16 1 4916 5054 745078548 745078411 2.170000e-35 161.0
54 TraesCS6A01G284800 chr2D 96.273 322 10 2 2762 3083 245778909 245778590 1.860000e-145 527.0
55 TraesCS6A01G284800 chr2D 76.619 278 63 2 1753 2029 600296412 600296688 1.310000e-32 152.0
56 TraesCS6A01G284800 chr2D 85.455 110 14 2 6047 6156 628273481 628273588 6.170000e-21 113.0
57 TraesCS6A01G284800 chr3D 95.950 321 11 2 2761 3081 509311908 509312226 3.110000e-143 520.0
58 TraesCS6A01G284800 chr3D 84.545 110 15 2 6047 6156 481916206 481916313 2.870000e-19 108.0
59 TraesCS6A01G284800 chr4D 85.271 387 39 11 4077 4458 461484154 461483781 4.260000e-102 383.0
60 TraesCS6A01G284800 chr4D 87.313 134 17 0 4921 5054 461483756 461483623 3.630000e-33 154.0
61 TraesCS6A01G284800 chr4D 86.239 109 13 1 6047 6155 359747368 359747474 4.770000e-22 117.0
62 TraesCS6A01G284800 chr4D 85.321 109 14 2 6047 6155 449457645 449457751 2.220000e-20 111.0
63 TraesCS6A01G284800 chr4D 87.629 97 9 3 6059 6155 54396102 54396009 7.980000e-20 110.0
64 TraesCS6A01G284800 chr4B 88.406 207 16 3 1333 1531 37561126 37561332 7.540000e-60 243.0
65 TraesCS6A01G284800 chr4B 84.545 110 15 2 6047 6156 106958362 106958255 2.870000e-19 108.0
66 TraesCS6A01G284800 chr4B 84.685 111 13 3 6046 6156 595719252 595719358 2.870000e-19 108.0
67 TraesCS6A01G284800 chr4A 96.503 143 4 1 1 142 13607702 13607844 1.260000e-57 235.0
68 TraesCS6A01G284800 chr4A 96.503 143 4 1 1 142 596863017 596863159 1.260000e-57 235.0
69 TraesCS6A01G284800 chr3A 96.503 143 4 1 1 142 387696575 387696717 1.260000e-57 235.0
70 TraesCS6A01G284800 chr3A 95.890 146 5 1 1 145 746337029 746336884 1.260000e-57 235.0
71 TraesCS6A01G284800 chr3A 86.364 110 12 3 6047 6156 7442542 7442436 4.770000e-22 117.0
72 TraesCS6A01G284800 chr1A 95.890 146 5 1 1 145 27468761 27468616 1.260000e-57 235.0
73 TraesCS6A01G284800 chr1A 96.503 143 4 1 1 142 474608807 474608949 1.260000e-57 235.0
74 TraesCS6A01G284800 chr1A 96.503 143 4 1 1 142 523371005 523371147 1.260000e-57 235.0
75 TraesCS6A01G284800 chr1A 86.364 110 13 2 6047 6156 325042003 325042110 1.330000e-22 119.0
76 TraesCS6A01G284800 chr7D 87.500 184 17 1 4077 4254 8998768 8998951 2.750000e-49 207.0
77 TraesCS6A01G284800 chr5B 85.586 111 14 2 6046 6156 276947043 276947151 1.720000e-21 115.0
78 TraesCS6A01G284800 chr5B 85.321 109 15 1 6047 6155 105778655 105778762 2.220000e-20 111.0
79 TraesCS6A01G284800 chr2B 83.898 118 17 2 6040 6156 465743802 465743686 2.220000e-20 111.0
80 TraesCS6A01G284800 chrUn 84.404 109 15 2 6047 6155 1714347 1714453 1.030000e-18 106.0
81 TraesCS6A01G284800 chrUn 86.598 97 11 2 6059 6155 255004676 255004582 1.030000e-18 106.0
82 TraesCS6A01G284800 chrUn 87.500 96 7 5 6039 6132 335108199 335108291 1.030000e-18 106.0
83 TraesCS6A01G284800 chrUn 84.314 102 15 1 6048 6149 126958650 126958550 1.730000e-16 99.0
84 TraesCS6A01G284800 chrUn 82.569 109 17 2 6047 6155 189301334 189301440 2.230000e-15 95.3
85 TraesCS6A01G284800 chrUn 79.675 123 18 7 6036 6156 88445019 88444902 1.740000e-11 82.4
86 TraesCS6A01G284800 chrUn 79.675 123 18 7 6036 6156 88486327 88486210 1.740000e-11 82.4
87 TraesCS6A01G284800 chrUn 79.675 123 18 7 6036 6156 333251350 333251233 1.740000e-11 82.4
88 TraesCS6A01G284800 chrUn 82.292 96 15 2 6061 6156 344351332 344351425 1.740000e-11 82.4
89 TraesCS6A01G284800 chrUn 79.675 123 18 7 6036 6156 359043733 359043850 1.740000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G284800 chr6A 516254444 516261965 7521 True 13891.000000 13891 100.000000 1 7522 1 chr6A.!!$R2 7521
1 TraesCS6A01G284800 chr6D 374121713 374129862 8149 True 1717.166667 3397 92.959500 147 7473 6 chr6D.!!$R4 7326
2 TraesCS6A01G284800 chr6B 561286589 561294007 7418 True 1753.166667 3354 92.629833 160 7522 6 chr6B.!!$R3 7362
3 TraesCS6A01G284800 chr5A 613927151 613927705 554 False 688.000000 688 89.209000 4075 4623 1 chr5A.!!$F1 548
4 TraesCS6A01G284800 chr5A 504009690 504010493 803 False 410.500000 462 85.971000 4120 4787 2 chr5A.!!$F2 667
5 TraesCS6A01G284800 chr7A 628829880 628830753 873 True 502.000000 654 87.467000 4075 4803 2 chr7A.!!$R2 728
6 TraesCS6A01G284800 chr7A 732067826 732068564 738 False 390.500000 538 87.240500 3652 4593 2 chr7A.!!$F7 941
7 TraesCS6A01G284800 chr1D 468134245 468135104 859 True 312.000000 351 87.571000 4122 4803 3 chr1D.!!$R2 681
8 TraesCS6A01G284800 chr4D 461483623 461484154 531 True 268.500000 383 86.292000 4077 5054 2 chr4D.!!$R2 977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.030369 CCCTGCGACGGTAGTACATC 59.970 60.000 2.06 0.00 0.00 3.06 F
138 139 0.109735 TCGAGCTGAACGTGTGCTAG 60.110 55.000 9.63 9.87 37.16 3.42 F
139 140 0.109735 CGAGCTGAACGTGTGCTAGA 60.110 55.000 9.63 0.00 37.16 2.43 F
142 143 0.435008 GCTGAACGTGTGCTAGAACG 59.565 55.000 10.39 10.39 45.15 3.95 F
143 144 0.435008 CTGAACGTGTGCTAGAACGC 59.565 55.000 4.12 4.12 43.49 4.84 F
1200 1215 0.674581 CAAAGCACAGGAGGATGCGA 60.675 55.000 0.00 0.00 46.74 5.10 F
2809 3221 0.036732 CAGGTGCTAAGCCTTCCACA 59.963 55.000 9.49 0.00 33.31 4.17 F
2887 3299 0.035056 CCCCAGGAAGAAACGATGCT 60.035 55.000 0.00 0.00 0.00 3.79 F
2910 3322 0.110373 CGCGTGAACCTAGGCAAAAC 60.110 55.000 9.30 1.41 0.00 2.43 F
3063 3475 0.253044 GCACCTCATCTAAGCACCCA 59.747 55.000 0.00 0.00 0.00 4.51 F
3286 3711 0.537188 ACCCGTTCAGCTACAGATGG 59.463 55.000 0.00 0.00 31.33 3.51 F
4907 5823 1.064463 GCCAGGGAATCAGGATCAACA 60.064 52.381 0.00 0.00 0.00 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1176 1191 1.073722 CCTCCTGTGCTTTGGCTCA 59.926 57.895 0.00 0.00 39.25 4.26 R
2060 2076 0.581053 AAACAAAAATTGCTGGCGCG 59.419 45.000 0.00 0.00 39.65 6.86 R
2061 2077 2.031437 TCAAAACAAAAATTGCTGGCGC 59.969 40.909 0.00 0.00 0.00 6.53 R
2102 2118 6.507023 CAAAGACAACACTTCCTTTTGCTAT 58.493 36.000 0.00 0.00 0.00 2.97 R
2165 2181 8.593945 AGCCTAACAAATAATTCAATGGAAGA 57.406 30.769 0.00 0.00 36.25 2.87 R
2868 3280 0.035056 AGCATCGTTTCTTCCTGGGG 60.035 55.000 0.00 0.00 0.00 4.96 R
4692 5454 3.118592 GGAGCTACTAGTTGGCAAGTGAT 60.119 47.826 17.67 7.84 0.00 3.06 R
4909 5825 2.032290 CGATCGTCTGAACAGCCGTATA 60.032 50.000 7.03 0.00 31.07 1.47 R
4980 5896 6.717289 TGTACTGCCTTAATACATTTCCAGT 58.283 36.000 0.00 0.00 36.41 4.00 R
5096 6012 4.637483 AAAATATGAACAGCGTCCCATG 57.363 40.909 0.00 0.00 0.00 3.66 R
5187 6103 0.893270 CTTCACGGACATTTGGGGCA 60.893 55.000 0.00 0.00 0.00 5.36 R
6772 7969 0.317160 TGCTGTATATAAGCCGCGCT 59.683 50.000 5.56 0.00 42.56 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.234300 TATTGTAGCGGTGCTTAGGC 57.766 50.000 3.95 0.00 40.44 3.93
37 38 2.047655 CAAAGCCCTGCGACGGTA 60.048 61.111 0.00 0.00 0.00 4.02
38 39 2.100631 CAAAGCCCTGCGACGGTAG 61.101 63.158 0.00 0.00 0.00 3.18
39 40 2.580601 AAAGCCCTGCGACGGTAGT 61.581 57.895 0.00 0.00 0.00 2.73
40 41 1.252904 AAAGCCCTGCGACGGTAGTA 61.253 55.000 0.00 0.00 0.00 1.82
41 42 1.941999 AAGCCCTGCGACGGTAGTAC 61.942 60.000 0.00 0.00 0.00 2.73
42 43 2.703798 GCCCTGCGACGGTAGTACA 61.704 63.158 2.06 0.00 0.00 2.90
43 44 2.012902 GCCCTGCGACGGTAGTACAT 62.013 60.000 2.06 0.00 0.00 2.29
44 45 0.030369 CCCTGCGACGGTAGTACATC 59.970 60.000 2.06 0.00 0.00 3.06
45 46 0.736636 CCTGCGACGGTAGTACATCA 59.263 55.000 2.06 0.00 0.00 3.07
46 47 1.133598 CCTGCGACGGTAGTACATCAA 59.866 52.381 2.06 0.00 0.00 2.57
47 48 2.451132 CTGCGACGGTAGTACATCAAG 58.549 52.381 2.06 0.00 0.00 3.02
48 49 2.086094 TGCGACGGTAGTACATCAAGA 58.914 47.619 2.06 0.00 0.00 3.02
49 50 2.686405 TGCGACGGTAGTACATCAAGAT 59.314 45.455 2.06 0.00 0.00 2.40
50 51 3.242969 TGCGACGGTAGTACATCAAGATC 60.243 47.826 2.06 0.00 0.00 2.75
51 52 3.542690 CGACGGTAGTACATCAAGATCG 58.457 50.000 2.06 0.00 0.00 3.69
52 53 3.002042 CGACGGTAGTACATCAAGATCGT 59.998 47.826 2.06 0.00 0.00 3.73
53 54 4.525686 GACGGTAGTACATCAAGATCGTC 58.474 47.826 2.06 5.77 37.81 4.20
54 55 3.943381 ACGGTAGTACATCAAGATCGTCA 59.057 43.478 2.06 0.00 0.00 4.35
55 56 4.201891 ACGGTAGTACATCAAGATCGTCAC 60.202 45.833 2.06 0.00 0.00 3.67
56 57 4.608951 GGTAGTACATCAAGATCGTCACC 58.391 47.826 2.06 0.00 0.00 4.02
57 58 4.097437 GGTAGTACATCAAGATCGTCACCA 59.903 45.833 2.06 0.00 0.00 4.17
58 59 4.111375 AGTACATCAAGATCGTCACCAC 57.889 45.455 0.00 0.00 0.00 4.16
60 61 0.647410 CATCAAGATCGTCACCACGC 59.353 55.000 0.00 0.00 46.28 5.34
61 62 0.460284 ATCAAGATCGTCACCACGCC 60.460 55.000 0.00 0.00 46.28 5.68
62 63 2.126071 AAGATCGTCACCACGCCG 60.126 61.111 0.00 0.00 46.28 6.46
63 64 2.927580 AAGATCGTCACCACGCCGT 61.928 57.895 0.00 0.00 46.28 5.68
64 65 2.814183 AAGATCGTCACCACGCCGTC 62.814 60.000 0.00 0.00 46.28 4.79
65 66 4.771356 ATCGTCACCACGCCGTCG 62.771 66.667 0.00 0.00 46.28 5.12
80 81 3.564455 GTCGTGTTGACGGAACTCT 57.436 52.632 0.00 0.00 46.11 3.24
81 82 1.849097 GTCGTGTTGACGGAACTCTT 58.151 50.000 0.00 0.00 46.11 2.85
82 83 1.785430 GTCGTGTTGACGGAACTCTTC 59.215 52.381 0.00 0.00 46.11 2.87
83 84 1.137513 CGTGTTGACGGAACTCTTCC 58.862 55.000 1.85 0.00 46.62 3.46
89 90 4.477969 TTGACGGAACTCTTCCCGACAC 62.478 54.545 7.86 0.29 46.44 3.67
92 93 2.545537 GGAACTCTTCCCGACACTTT 57.454 50.000 0.00 0.00 44.30 2.66
93 94 3.672767 GGAACTCTTCCCGACACTTTA 57.327 47.619 0.00 0.00 44.30 1.85
94 95 3.324117 GGAACTCTTCCCGACACTTTAC 58.676 50.000 0.00 0.00 44.30 2.01
95 96 3.006644 GGAACTCTTCCCGACACTTTACT 59.993 47.826 0.00 0.00 44.30 2.24
96 97 3.662247 ACTCTTCCCGACACTTTACTG 57.338 47.619 0.00 0.00 0.00 2.74
97 98 2.299297 ACTCTTCCCGACACTTTACTGG 59.701 50.000 0.00 0.00 0.00 4.00
98 99 2.561419 CTCTTCCCGACACTTTACTGGA 59.439 50.000 0.00 0.00 0.00 3.86
99 100 3.170717 TCTTCCCGACACTTTACTGGAT 58.829 45.455 0.00 0.00 0.00 3.41
100 101 3.194968 TCTTCCCGACACTTTACTGGATC 59.805 47.826 0.00 0.00 0.00 3.36
101 102 1.475280 TCCCGACACTTTACTGGATCG 59.525 52.381 0.00 0.00 0.00 3.69
102 103 1.470979 CCCGACACTTTACTGGATCGG 60.471 57.143 3.53 3.53 46.77 4.18
103 104 2.933495 CGACACTTTACTGGATCGGA 57.067 50.000 0.00 0.00 0.00 4.55
104 105 2.798680 CGACACTTTACTGGATCGGAG 58.201 52.381 0.00 0.00 0.00 4.63
105 106 2.163815 CGACACTTTACTGGATCGGAGT 59.836 50.000 1.97 1.97 0.00 3.85
106 107 3.512680 GACACTTTACTGGATCGGAGTG 58.487 50.000 6.33 0.00 40.11 3.51
107 108 2.271800 CACTTTACTGGATCGGAGTGC 58.728 52.381 6.33 0.00 0.00 4.40
108 109 1.135083 ACTTTACTGGATCGGAGTGCG 60.135 52.381 0.00 0.00 0.00 5.34
109 110 0.174845 TTTACTGGATCGGAGTGCGG 59.825 55.000 3.57 0.00 0.00 5.69
110 111 1.672854 TTACTGGATCGGAGTGCGGG 61.673 60.000 3.57 0.00 0.00 6.13
111 112 4.227134 CTGGATCGGAGTGCGGGG 62.227 72.222 3.57 0.00 0.00 5.73
112 113 4.770362 TGGATCGGAGTGCGGGGA 62.770 66.667 3.57 0.00 0.00 4.81
113 114 3.234730 GGATCGGAGTGCGGGGAT 61.235 66.667 3.57 0.00 0.00 3.85
114 115 2.340443 GATCGGAGTGCGGGGATC 59.660 66.667 3.57 0.00 0.00 3.36
115 116 3.559657 GATCGGAGTGCGGGGATCG 62.560 68.421 3.57 0.00 42.76 3.69
117 118 4.143333 CGGAGTGCGGGGATCGTT 62.143 66.667 0.00 0.00 41.72 3.85
118 119 2.777972 CGGAGTGCGGGGATCGTTA 61.778 63.158 0.00 0.00 41.72 3.18
119 120 1.746517 GGAGTGCGGGGATCGTTAT 59.253 57.895 0.00 0.00 41.72 1.89
120 121 0.319641 GGAGTGCGGGGATCGTTATC 60.320 60.000 0.00 0.00 41.72 1.75
121 122 0.663568 GAGTGCGGGGATCGTTATCG 60.664 60.000 0.00 0.00 41.72 2.92
132 133 1.891178 TCGTTATCGAGCTGAACGTG 58.109 50.000 18.22 0.00 44.72 4.49
133 134 1.198408 TCGTTATCGAGCTGAACGTGT 59.802 47.619 18.22 1.31 44.72 4.49
134 135 1.317611 CGTTATCGAGCTGAACGTGTG 59.682 52.381 13.42 0.00 40.71 3.82
135 136 1.059264 GTTATCGAGCTGAACGTGTGC 59.941 52.381 0.00 0.00 0.00 4.57
136 137 0.526211 TATCGAGCTGAACGTGTGCT 59.474 50.000 9.46 9.46 40.02 4.40
137 138 0.526211 ATCGAGCTGAACGTGTGCTA 59.474 50.000 9.63 0.00 37.16 3.49
138 139 0.109735 TCGAGCTGAACGTGTGCTAG 60.110 55.000 9.63 9.87 37.16 3.42
139 140 0.109735 CGAGCTGAACGTGTGCTAGA 60.110 55.000 9.63 0.00 37.16 2.43
140 141 1.666023 CGAGCTGAACGTGTGCTAGAA 60.666 52.381 9.63 0.00 37.16 2.10
141 142 1.721926 GAGCTGAACGTGTGCTAGAAC 59.278 52.381 9.63 0.00 37.16 3.01
142 143 0.435008 GCTGAACGTGTGCTAGAACG 59.565 55.000 10.39 10.39 45.15 3.95
143 144 0.435008 CTGAACGTGTGCTAGAACGC 59.565 55.000 4.12 4.12 43.49 4.84
628 636 2.280457 GGATCTAGCTGCGGGTGC 60.280 66.667 7.69 0.00 43.20 5.01
652 660 3.202706 GATTCCCGAGGCGGTTGC 61.203 66.667 5.06 0.00 46.80 4.17
709 717 3.135414 CGGGAGCATTTATTGTGTGTG 57.865 47.619 0.00 0.00 0.00 3.82
774 782 1.614903 CTTGTTTCCATGGCTTCTGCA 59.385 47.619 6.96 0.00 41.91 4.41
822 830 4.446385 CACGAGTTCGATGTTTTCCAGTAA 59.554 41.667 8.72 0.00 43.02 2.24
856 864 8.783093 TGAATTCAGTTCTAACCTGTATTTGTG 58.217 33.333 3.38 0.00 37.72 3.33
943 954 6.367422 GGCTGTACATATAGTTTCAGATCAGC 59.633 42.308 0.00 0.00 41.37 4.26
1012 1023 1.221414 GCGGAGAATGTCAGGTATGC 58.779 55.000 0.00 0.00 0.00 3.14
1013 1024 1.473257 GCGGAGAATGTCAGGTATGCA 60.473 52.381 0.00 0.00 0.00 3.96
1039 1050 5.529430 TGTTGTTGGTTGTTCTGTAGGTATG 59.471 40.000 0.00 0.00 0.00 2.39
1075 1086 7.117667 CGGATACAATGCAGCTAATGTTATGTA 59.882 37.037 0.00 0.00 31.44 2.29
1110 1125 4.749099 GCTGTTTCAGAGAGCAATATCGAT 59.251 41.667 2.16 2.16 43.79 3.59
1176 1191 1.686052 GATGCCGAGAACTCAGAGGAT 59.314 52.381 1.53 0.00 0.00 3.24
1200 1215 0.674581 CAAAGCACAGGAGGATGCGA 60.675 55.000 0.00 0.00 46.74 5.10
1224 1239 1.451028 GAGGAAGAAGGCGCTGCAT 60.451 57.895 7.64 0.00 0.00 3.96
1329 1344 1.003580 GTCAGGGATGCTGGTGAAGAA 59.996 52.381 0.00 0.00 0.00 2.52
1435 1450 6.485171 AGGTTAGTATGGATGAAACTTTGCT 58.515 36.000 0.00 0.00 0.00 3.91
1455 1470 3.058224 GCTTCGTATTGGTGTTTTCAGCT 60.058 43.478 0.00 0.00 46.98 4.24
1456 1471 4.466828 CTTCGTATTGGTGTTTTCAGCTG 58.533 43.478 7.63 7.63 46.98 4.24
1491 1506 7.770433 CAGTTGGTGATTCTTCATTCTGGTATA 59.230 37.037 0.00 0.00 33.56 1.47
1492 1507 8.497745 AGTTGGTGATTCTTCATTCTGGTATAT 58.502 33.333 0.00 0.00 33.56 0.86
1493 1508 8.778358 GTTGGTGATTCTTCATTCTGGTATATC 58.222 37.037 0.00 0.00 33.56 1.63
1494 1509 8.267620 TGGTGATTCTTCATTCTGGTATATCT 57.732 34.615 0.00 0.00 33.56 1.98
1495 1510 8.152898 TGGTGATTCTTCATTCTGGTATATCTG 58.847 37.037 0.00 0.00 33.56 2.90
1496 1511 7.605691 GGTGATTCTTCATTCTGGTATATCTGG 59.394 40.741 0.00 0.00 33.56 3.86
1497 1512 8.153550 GTGATTCTTCATTCTGGTATATCTGGT 58.846 37.037 0.00 0.00 33.56 4.00
1498 1513 9.379770 TGATTCTTCATTCTGGTATATCTGGTA 57.620 33.333 0.00 0.00 0.00 3.25
1528 1543 8.070769 AGATTTTTGAAAGCTAGAAAGTTCGAC 58.929 33.333 0.00 0.00 0.00 4.20
1690 1706 8.258007 AGATGCATTTGATGTGATTTGAAAGAT 58.742 29.630 0.00 0.00 0.00 2.40
1698 1714 3.256558 GTGATTTGAAAGATTGCCTGCC 58.743 45.455 0.00 0.00 0.00 4.85
1699 1715 2.094597 TGATTTGAAAGATTGCCTGCCG 60.095 45.455 0.00 0.00 0.00 5.69
1720 1736 5.163693 GCCGTATAATTTGCCTTACAGTGTT 60.164 40.000 0.00 0.00 0.00 3.32
1737 1753 6.536091 ACAGTGTTGTGCATACTGATGACAG 61.536 44.000 21.99 0.00 43.35 3.51
1864 1880 7.705325 GTCTATATCGAGTTGCTTGGAAAAGTA 59.295 37.037 0.00 0.00 0.00 2.24
2060 2076 7.614192 TGTCCTTTTCCTAAATATGGTTTCTCC 59.386 37.037 0.00 0.00 0.00 3.71
2061 2077 6.826741 TCCTTTTCCTAAATATGGTTTCTCCG 59.173 38.462 0.00 0.00 39.52 4.63
2078 2094 1.220817 CCGCGCCAGCAATTTTTGTT 61.221 50.000 0.00 0.00 45.49 2.83
2080 2096 1.004079 CGCGCCAGCAATTTTTGTTTT 60.004 42.857 0.00 0.00 45.49 2.43
2090 2106 8.663911 CCAGCAATTTTTGTTTTGACTCTAAAA 58.336 29.630 0.00 0.00 0.00 1.52
2157 2173 6.993902 ACATTTTTCCGAAACTACCTTCTGTA 59.006 34.615 0.00 0.00 0.00 2.74
2220 2237 1.829533 CTTTGTGGGGCTGCACTGT 60.830 57.895 0.21 0.00 0.00 3.55
2229 2246 2.555199 GGGCTGCACTGTAGTTATCAG 58.445 52.381 0.50 0.00 38.68 2.90
2232 2249 3.868077 GGCTGCACTGTAGTTATCAGAAG 59.132 47.826 0.50 0.00 36.81 2.85
2306 2323 7.209471 TGCTACGATACAACTGGAAATTTTT 57.791 32.000 0.00 0.00 0.00 1.94
2329 2346 9.555727 TTTTGCAGAAGTTATAACTCTTACACT 57.444 29.630 18.28 1.00 38.57 3.55
2330 2347 8.758633 TTGCAGAAGTTATAACTCTTACACTC 57.241 34.615 18.28 10.26 38.57 3.51
2331 2348 8.123639 TGCAGAAGTTATAACTCTTACACTCT 57.876 34.615 18.28 12.24 38.57 3.24
2332 2349 8.585881 TGCAGAAGTTATAACTCTTACACTCTT 58.414 33.333 18.28 0.00 38.57 2.85
2336 2353 9.518906 GAAGTTATAACTCTTACACTCTTAGCC 57.481 37.037 18.28 0.00 38.57 3.93
2337 2354 8.826293 AGTTATAACTCTTACACTCTTAGCCT 57.174 34.615 12.50 0.00 32.86 4.58
2338 2355 8.905850 AGTTATAACTCTTACACTCTTAGCCTC 58.094 37.037 12.50 0.00 32.86 4.70
2339 2356 8.905850 GTTATAACTCTTACACTCTTAGCCTCT 58.094 37.037 8.41 0.00 0.00 3.69
2340 2357 5.907866 AACTCTTACACTCTTAGCCTCTC 57.092 43.478 0.00 0.00 0.00 3.20
2341 2358 4.924625 ACTCTTACACTCTTAGCCTCTCA 58.075 43.478 0.00 0.00 0.00 3.27
2342 2359 4.947388 ACTCTTACACTCTTAGCCTCTCAG 59.053 45.833 0.00 0.00 0.00 3.35
2343 2360 4.274147 TCTTACACTCTTAGCCTCTCAGG 58.726 47.826 0.00 0.00 38.80 3.86
2344 2361 1.859302 ACACTCTTAGCCTCTCAGGG 58.141 55.000 0.00 0.00 35.37 4.45
2346 2363 2.312140 ACACTCTTAGCCTCTCAGGGTA 59.688 50.000 0.00 0.00 45.76 3.69
2347 2364 2.691011 CACTCTTAGCCTCTCAGGGTAC 59.309 54.545 0.81 0.00 46.97 3.34
2396 2413 4.702131 GGGATTTGTGAAGATGTACAAGCT 59.298 41.667 0.00 0.00 37.98 3.74
2535 2552 3.374220 TTTCTTGAATGCTGCTGGTTG 57.626 42.857 0.00 0.00 0.00 3.77
2599 2618 4.319190 CCAATACTTTTTCTCGAACACGCA 60.319 41.667 0.00 0.00 0.00 5.24
2609 2630 3.612423 TCTCGAACACGCATCTAAATGTG 59.388 43.478 0.00 0.00 46.66 3.21
2661 3072 2.543653 CCTGGCAGAAAACAAAACCGAG 60.544 50.000 17.94 0.00 0.00 4.63
2667 3078 5.445407 GGCAGAAAACAAAACCGAGAAAAAC 60.445 40.000 0.00 0.00 0.00 2.43
2772 3184 4.554036 GGCTGCTAAGGCCCCTCG 62.554 72.222 0.00 0.00 43.13 4.63
2774 3186 3.785859 CTGCTAAGGCCCCTCGCA 61.786 66.667 0.00 2.37 40.31 5.10
2775 3187 3.326578 TGCTAAGGCCCCTCGCAA 61.327 61.111 0.00 0.00 40.31 4.85
2776 3188 2.193248 GCTAAGGCCCCTCGCAAT 59.807 61.111 0.00 0.00 40.31 3.56
2777 3189 2.189499 GCTAAGGCCCCTCGCAATG 61.189 63.158 0.00 0.00 40.31 2.82
2778 3190 2.124320 TAAGGCCCCTCGCAATGC 60.124 61.111 0.00 0.00 40.31 3.56
2779 3191 2.615227 CTAAGGCCCCTCGCAATGCT 62.615 60.000 2.94 0.00 40.31 3.79
2780 3192 2.608970 TAAGGCCCCTCGCAATGCTC 62.609 60.000 2.94 0.00 40.31 4.26
2782 3194 4.802051 GCCCCTCGCAATGCTCCA 62.802 66.667 2.94 0.00 37.47 3.86
2783 3195 2.825836 CCCCTCGCAATGCTCCAC 60.826 66.667 2.94 0.00 0.00 4.02
2784 3196 2.825836 CCCTCGCAATGCTCCACC 60.826 66.667 2.94 0.00 0.00 4.61
2785 3197 2.270205 CCTCGCAATGCTCCACCT 59.730 61.111 2.94 0.00 0.00 4.00
2786 3198 1.377725 CCTCGCAATGCTCCACCTT 60.378 57.895 2.94 0.00 0.00 3.50
2787 3199 1.651240 CCTCGCAATGCTCCACCTTG 61.651 60.000 2.94 0.00 0.00 3.61
2788 3200 0.957395 CTCGCAATGCTCCACCTTGT 60.957 55.000 2.94 0.00 0.00 3.16
2789 3201 0.323302 TCGCAATGCTCCACCTTGTA 59.677 50.000 2.94 0.00 0.00 2.41
2790 3202 0.447801 CGCAATGCTCCACCTTGTAC 59.552 55.000 2.94 0.00 0.00 2.90
2791 3203 1.533625 GCAATGCTCCACCTTGTACA 58.466 50.000 0.00 0.00 0.00 2.90
2792 3204 1.470098 GCAATGCTCCACCTTGTACAG 59.530 52.381 0.00 0.00 0.00 2.74
2802 3214 1.739067 CCTTGTACAGGTGCTAAGCC 58.261 55.000 4.10 0.00 37.99 4.35
2803 3215 1.279271 CCTTGTACAGGTGCTAAGCCT 59.721 52.381 4.10 0.00 37.99 4.58
2804 3216 2.290323 CCTTGTACAGGTGCTAAGCCTT 60.290 50.000 4.10 0.00 37.99 4.35
2805 3217 2.762535 TGTACAGGTGCTAAGCCTTC 57.237 50.000 0.00 0.00 33.31 3.46
2806 3218 1.278127 TGTACAGGTGCTAAGCCTTCC 59.722 52.381 0.00 0.00 33.31 3.46
2807 3219 1.278127 GTACAGGTGCTAAGCCTTCCA 59.722 52.381 0.00 0.00 33.31 3.53
2808 3220 0.036875 ACAGGTGCTAAGCCTTCCAC 59.963 55.000 0.84 0.84 33.31 4.02
2809 3221 0.036732 CAGGTGCTAAGCCTTCCACA 59.963 55.000 9.49 0.00 33.31 4.17
2810 3222 0.995024 AGGTGCTAAGCCTTCCACAT 59.005 50.000 9.49 1.23 31.04 3.21
2811 3223 2.092968 CAGGTGCTAAGCCTTCCACATA 60.093 50.000 9.49 0.00 33.31 2.29
2812 3224 2.171448 AGGTGCTAAGCCTTCCACATAG 59.829 50.000 9.49 0.00 31.04 2.23
2813 3225 2.565841 GTGCTAAGCCTTCCACATAGG 58.434 52.381 3.97 0.00 39.47 2.57
2839 3251 6.515272 AAAAATCTGATGTGGCGAGTTATT 57.485 33.333 0.00 0.00 0.00 1.40
2840 3252 6.515272 AAAATCTGATGTGGCGAGTTATTT 57.485 33.333 0.00 0.00 0.00 1.40
2841 3253 7.624360 AAAATCTGATGTGGCGAGTTATTTA 57.376 32.000 0.00 0.00 0.00 1.40
2842 3254 7.624360 AAATCTGATGTGGCGAGTTATTTAA 57.376 32.000 0.00 0.00 0.00 1.52
2843 3255 6.851222 ATCTGATGTGGCGAGTTATTTAAG 57.149 37.500 0.00 0.00 0.00 1.85
2844 3256 5.972935 TCTGATGTGGCGAGTTATTTAAGA 58.027 37.500 0.00 0.00 0.00 2.10
2845 3257 6.403049 TCTGATGTGGCGAGTTATTTAAGAA 58.597 36.000 0.00 0.00 0.00 2.52
2846 3258 6.535150 TCTGATGTGGCGAGTTATTTAAGAAG 59.465 38.462 0.00 0.00 0.00 2.85
2847 3259 6.403049 TGATGTGGCGAGTTATTTAAGAAGA 58.597 36.000 0.00 0.00 0.00 2.87
2848 3260 6.535150 TGATGTGGCGAGTTATTTAAGAAGAG 59.465 38.462 0.00 0.00 0.00 2.85
2849 3261 6.032956 TGTGGCGAGTTATTTAAGAAGAGA 57.967 37.500 0.00 0.00 0.00 3.10
2850 3262 6.100004 TGTGGCGAGTTATTTAAGAAGAGAG 58.900 40.000 0.00 0.00 0.00 3.20
2851 3263 6.071560 TGTGGCGAGTTATTTAAGAAGAGAGA 60.072 38.462 0.00 0.00 0.00 3.10
2852 3264 6.474102 GTGGCGAGTTATTTAAGAAGAGAGAG 59.526 42.308 0.00 0.00 0.00 3.20
2853 3265 6.377429 TGGCGAGTTATTTAAGAAGAGAGAGA 59.623 38.462 0.00 0.00 0.00 3.10
2854 3266 6.915843 GGCGAGTTATTTAAGAAGAGAGAGAG 59.084 42.308 0.00 0.00 0.00 3.20
2855 3267 7.201750 GGCGAGTTATTTAAGAAGAGAGAGAGA 60.202 40.741 0.00 0.00 0.00 3.10
2856 3268 8.349983 GCGAGTTATTTAAGAAGAGAGAGAGAT 58.650 37.037 0.00 0.00 0.00 2.75
2857 3269 9.663904 CGAGTTATTTAAGAAGAGAGAGAGATG 57.336 37.037 0.00 0.00 0.00 2.90
2862 3274 8.593945 ATTTAAGAAGAGAGAGAGATGAGTGT 57.406 34.615 0.00 0.00 0.00 3.55
2863 3275 5.902613 AAGAAGAGAGAGAGATGAGTGTG 57.097 43.478 0.00 0.00 0.00 3.82
2864 3276 4.272489 AGAAGAGAGAGAGATGAGTGTGG 58.728 47.826 0.00 0.00 0.00 4.17
2865 3277 3.737559 AGAGAGAGAGATGAGTGTGGT 57.262 47.619 0.00 0.00 0.00 4.16
2866 3278 3.355378 AGAGAGAGAGATGAGTGTGGTG 58.645 50.000 0.00 0.00 0.00 4.17
2867 3279 3.010027 AGAGAGAGAGATGAGTGTGGTGA 59.990 47.826 0.00 0.00 0.00 4.02
2868 3280 3.088532 AGAGAGAGATGAGTGTGGTGAC 58.911 50.000 0.00 0.00 0.00 3.67
2869 3281 2.165437 GAGAGAGATGAGTGTGGTGACC 59.835 54.545 0.00 0.00 0.00 4.02
2870 3282 1.205893 GAGAGATGAGTGTGGTGACCC 59.794 57.143 0.00 0.00 0.00 4.46
2871 3283 0.250513 GAGATGAGTGTGGTGACCCC 59.749 60.000 0.00 0.00 0.00 4.95
2872 3284 0.473694 AGATGAGTGTGGTGACCCCA 60.474 55.000 0.00 0.00 42.51 4.96
2873 3285 0.036010 GATGAGTGTGGTGACCCCAG 60.036 60.000 0.00 0.00 46.45 4.45
2874 3286 1.492133 ATGAGTGTGGTGACCCCAGG 61.492 60.000 0.00 0.00 46.45 4.45
2875 3287 1.841556 GAGTGTGGTGACCCCAGGA 60.842 63.158 0.00 0.00 46.45 3.86
2876 3288 1.385347 AGTGTGGTGACCCCAGGAA 60.385 57.895 0.00 0.00 46.45 3.36
2877 3289 1.073199 GTGTGGTGACCCCAGGAAG 59.927 63.158 0.00 0.00 46.45 3.46
2878 3290 1.074090 TGTGGTGACCCCAGGAAGA 60.074 57.895 0.00 0.00 46.45 2.87
2879 3291 0.696143 TGTGGTGACCCCAGGAAGAA 60.696 55.000 0.00 0.00 46.45 2.52
2880 3292 0.476771 GTGGTGACCCCAGGAAGAAA 59.523 55.000 0.00 0.00 46.45 2.52
2881 3293 0.476771 TGGTGACCCCAGGAAGAAAC 59.523 55.000 0.00 0.00 38.72 2.78
2882 3294 0.605589 GGTGACCCCAGGAAGAAACG 60.606 60.000 0.00 0.00 0.00 3.60
2883 3295 0.395312 GTGACCCCAGGAAGAAACGA 59.605 55.000 0.00 0.00 0.00 3.85
2884 3296 1.003233 GTGACCCCAGGAAGAAACGAT 59.997 52.381 0.00 0.00 0.00 3.73
2885 3297 1.003118 TGACCCCAGGAAGAAACGATG 59.997 52.381 0.00 0.00 0.00 3.84
2886 3298 0.322546 ACCCCAGGAAGAAACGATGC 60.323 55.000 0.00 0.00 0.00 3.91
2887 3299 0.035056 CCCCAGGAAGAAACGATGCT 60.035 55.000 0.00 0.00 0.00 3.79
2888 3300 1.209504 CCCCAGGAAGAAACGATGCTA 59.790 52.381 0.00 0.00 0.00 3.49
2889 3301 2.355716 CCCCAGGAAGAAACGATGCTAA 60.356 50.000 0.00 0.00 0.00 3.09
2890 3302 2.939103 CCCAGGAAGAAACGATGCTAAG 59.061 50.000 0.00 0.00 0.00 2.18
2891 3303 2.352960 CCAGGAAGAAACGATGCTAAGC 59.647 50.000 0.00 0.00 0.00 3.09
2892 3304 2.029728 CAGGAAGAAACGATGCTAAGCG 59.970 50.000 0.00 0.00 42.10 4.68
2893 3305 1.267582 GGAAGAAACGATGCTAAGCGC 60.268 52.381 0.00 0.00 39.29 5.92
2894 3306 0.370273 AAGAAACGATGCTAAGCGCG 59.630 50.000 0.00 0.00 43.27 6.86
2895 3307 0.736325 AGAAACGATGCTAAGCGCGT 60.736 50.000 8.43 0.00 42.05 6.01
2896 3308 0.584054 GAAACGATGCTAAGCGCGTG 60.584 55.000 8.43 0.00 40.14 5.34
2897 3309 1.011968 AAACGATGCTAAGCGCGTGA 61.012 50.000 8.43 0.00 40.14 4.35
2898 3310 1.011968 AACGATGCTAAGCGCGTGAA 61.012 50.000 8.43 0.00 40.14 3.18
2899 3311 1.013323 CGATGCTAAGCGCGTGAAC 60.013 57.895 8.43 0.00 43.27 3.18
2900 3312 1.348594 GATGCTAAGCGCGTGAACC 59.651 57.895 8.43 0.00 43.27 3.62
2901 3313 1.079127 ATGCTAAGCGCGTGAACCT 60.079 52.632 8.43 0.00 43.27 3.50
2902 3314 0.174845 ATGCTAAGCGCGTGAACCTA 59.825 50.000 8.43 0.00 43.27 3.08
2903 3315 0.457853 TGCTAAGCGCGTGAACCTAG 60.458 55.000 8.43 0.00 43.27 3.02
2904 3316 1.146358 GCTAAGCGCGTGAACCTAGG 61.146 60.000 7.41 7.41 0.00 3.02
2905 3317 1.146358 CTAAGCGCGTGAACCTAGGC 61.146 60.000 9.30 0.00 0.00 3.93
2906 3318 1.879737 TAAGCGCGTGAACCTAGGCA 61.880 55.000 9.30 0.00 0.00 4.75
2907 3319 2.725203 AAGCGCGTGAACCTAGGCAA 62.725 55.000 9.30 0.00 0.00 4.52
2908 3320 2.322081 GCGCGTGAACCTAGGCAAA 61.322 57.895 9.30 0.00 0.00 3.68
2909 3321 1.847890 GCGCGTGAACCTAGGCAAAA 61.848 55.000 9.30 0.00 0.00 2.44
2910 3322 0.110373 CGCGTGAACCTAGGCAAAAC 60.110 55.000 9.30 1.41 0.00 2.43
2911 3323 0.948678 GCGTGAACCTAGGCAAAACA 59.051 50.000 9.30 0.00 0.00 2.83
2912 3324 1.539827 GCGTGAACCTAGGCAAAACAT 59.460 47.619 9.30 0.00 0.00 2.71
2913 3325 2.030274 GCGTGAACCTAGGCAAAACATT 60.030 45.455 9.30 0.00 0.00 2.71
2914 3326 3.552068 GCGTGAACCTAGGCAAAACATTT 60.552 43.478 9.30 0.00 0.00 2.32
2915 3327 4.320641 GCGTGAACCTAGGCAAAACATTTA 60.321 41.667 9.30 0.00 0.00 1.40
2916 3328 5.764131 CGTGAACCTAGGCAAAACATTTAA 58.236 37.500 9.30 0.00 0.00 1.52
2917 3329 6.210078 CGTGAACCTAGGCAAAACATTTAAA 58.790 36.000 9.30 0.00 0.00 1.52
2918 3330 6.362283 CGTGAACCTAGGCAAAACATTTAAAG 59.638 38.462 9.30 0.00 0.00 1.85
2919 3331 6.645003 GTGAACCTAGGCAAAACATTTAAAGG 59.355 38.462 9.30 0.00 0.00 3.11
2920 3332 6.551601 TGAACCTAGGCAAAACATTTAAAGGA 59.448 34.615 9.30 0.00 0.00 3.36
2921 3333 6.987403 ACCTAGGCAAAACATTTAAAGGAA 57.013 33.333 9.30 0.00 0.00 3.36
2922 3334 6.993079 ACCTAGGCAAAACATTTAAAGGAAG 58.007 36.000 9.30 0.00 0.00 3.46
2923 3335 6.014584 ACCTAGGCAAAACATTTAAAGGAAGG 60.015 38.462 9.30 3.19 0.00 3.46
2924 3336 6.210584 CCTAGGCAAAACATTTAAAGGAAGGA 59.789 38.462 6.90 0.00 0.00 3.36
2925 3337 6.493189 AGGCAAAACATTTAAAGGAAGGAA 57.507 33.333 6.90 0.00 0.00 3.36
2926 3338 6.524734 AGGCAAAACATTTAAAGGAAGGAAG 58.475 36.000 6.90 0.00 0.00 3.46
2927 3339 5.179368 GGCAAAACATTTAAAGGAAGGAAGC 59.821 40.000 6.90 3.11 0.00 3.86
2928 3340 5.179368 GCAAAACATTTAAAGGAAGGAAGCC 59.821 40.000 6.90 0.00 0.00 4.35
2929 3341 5.483685 AAACATTTAAAGGAAGGAAGCCC 57.516 39.130 6.90 0.00 0.00 5.19
2930 3342 4.126520 ACATTTAAAGGAAGGAAGCCCA 57.873 40.909 6.90 0.00 33.88 5.36
2931 3343 3.832490 ACATTTAAAGGAAGGAAGCCCAC 59.168 43.478 6.90 0.00 33.88 4.61
2932 3344 2.597578 TTAAAGGAAGGAAGCCCACC 57.402 50.000 0.00 0.00 33.88 4.61
2933 3345 1.451449 TAAAGGAAGGAAGCCCACCA 58.549 50.000 0.00 0.00 34.91 4.17
2934 3346 0.560688 AAAGGAAGGAAGCCCACCAA 59.439 50.000 0.00 0.00 34.91 3.67
2935 3347 0.786435 AAGGAAGGAAGCCCACCAAT 59.214 50.000 0.00 0.00 34.91 3.16
2936 3348 1.681229 AGGAAGGAAGCCCACCAATA 58.319 50.000 0.00 0.00 34.91 1.90
2937 3349 1.285078 AGGAAGGAAGCCCACCAATAC 59.715 52.381 0.00 0.00 34.91 1.89
2938 3350 1.005450 GGAAGGAAGCCCACCAATACA 59.995 52.381 0.00 0.00 33.45 2.29
2939 3351 2.358195 GGAAGGAAGCCCACCAATACAT 60.358 50.000 0.00 0.00 33.45 2.29
2940 3352 2.442236 AGGAAGCCCACCAATACATG 57.558 50.000 0.00 0.00 33.88 3.21
2941 3353 1.922447 AGGAAGCCCACCAATACATGA 59.078 47.619 0.00 0.00 33.88 3.07
2942 3354 2.311542 AGGAAGCCCACCAATACATGAA 59.688 45.455 0.00 0.00 33.88 2.57
2943 3355 2.689983 GGAAGCCCACCAATACATGAAG 59.310 50.000 0.00 0.00 0.00 3.02
2944 3356 3.620488 GAAGCCCACCAATACATGAAGA 58.380 45.455 0.00 0.00 0.00 2.87
2945 3357 3.287867 AGCCCACCAATACATGAAGAG 57.712 47.619 0.00 0.00 0.00 2.85
2946 3358 1.678101 GCCCACCAATACATGAAGAGC 59.322 52.381 0.00 0.00 0.00 4.09
2947 3359 2.684927 GCCCACCAATACATGAAGAGCT 60.685 50.000 0.00 0.00 0.00 4.09
2948 3360 3.624777 CCCACCAATACATGAAGAGCTT 58.375 45.455 0.00 0.00 0.00 3.74
2949 3361 4.019174 CCCACCAATACATGAAGAGCTTT 58.981 43.478 0.00 0.00 0.00 3.51
2950 3362 5.192927 CCCACCAATACATGAAGAGCTTTA 58.807 41.667 0.00 0.00 0.00 1.85
2951 3363 5.297776 CCCACCAATACATGAAGAGCTTTAG 59.702 44.000 0.00 0.00 0.00 1.85
2952 3364 5.882557 CCACCAATACATGAAGAGCTTTAGT 59.117 40.000 0.00 0.00 0.00 2.24
2953 3365 6.375455 CCACCAATACATGAAGAGCTTTAGTT 59.625 38.462 0.00 0.00 0.00 2.24
2954 3366 7.246311 CACCAATACATGAAGAGCTTTAGTTG 58.754 38.462 0.00 0.00 0.00 3.16
2955 3367 6.127897 ACCAATACATGAAGAGCTTTAGTTGC 60.128 38.462 0.00 0.00 0.00 4.17
2956 3368 6.094603 CCAATACATGAAGAGCTTTAGTTGCT 59.905 38.462 0.00 0.00 44.24 3.91
2957 3369 7.280876 CCAATACATGAAGAGCTTTAGTTGCTA 59.719 37.037 0.00 0.00 41.30 3.49
2958 3370 8.668353 CAATACATGAAGAGCTTTAGTTGCTAA 58.332 33.333 0.00 0.00 41.30 3.09
2959 3371 8.792830 ATACATGAAGAGCTTTAGTTGCTAAA 57.207 30.769 0.00 2.01 41.30 1.85
2960 3372 7.693969 ACATGAAGAGCTTTAGTTGCTAAAT 57.306 32.000 0.00 0.00 41.30 1.40
2961 3373 7.756558 ACATGAAGAGCTTTAGTTGCTAAATC 58.243 34.615 0.00 0.00 41.30 2.17
2962 3374 7.391554 ACATGAAGAGCTTTAGTTGCTAAATCA 59.608 33.333 0.00 3.92 41.30 2.57
2963 3375 7.928307 TGAAGAGCTTTAGTTGCTAAATCAT 57.072 32.000 2.34 0.00 41.30 2.45
2964 3376 8.340618 TGAAGAGCTTTAGTTGCTAAATCATT 57.659 30.769 2.34 0.00 41.30 2.57
2965 3377 9.448438 TGAAGAGCTTTAGTTGCTAAATCATTA 57.552 29.630 2.34 0.00 41.30 1.90
2976 3388 9.362539 AGTTGCTAAATCATTAAATCAAGCAAG 57.637 29.630 6.66 0.00 38.86 4.01
2977 3389 7.760131 TGCTAAATCATTAAATCAAGCAAGC 57.240 32.000 0.00 0.00 0.00 4.01
2978 3390 7.549839 TGCTAAATCATTAAATCAAGCAAGCT 58.450 30.769 0.00 0.00 0.00 3.74
2979 3391 8.036575 TGCTAAATCATTAAATCAAGCAAGCTT 58.963 29.630 0.59 0.59 36.60 3.74
2980 3392 9.520204 GCTAAATCATTAAATCAAGCAAGCTTA 57.480 29.630 7.03 0.00 34.50 3.09
2982 3394 7.998753 AATCATTAAATCAAGCAAGCTTAGC 57.001 32.000 7.03 5.67 34.50 3.09
2983 3395 6.513806 TCATTAAATCAAGCAAGCTTAGCA 57.486 33.333 18.74 3.67 34.50 3.49
2984 3396 6.923012 TCATTAAATCAAGCAAGCTTAGCAA 58.077 32.000 18.74 7.84 34.50 3.91
2985 3397 6.808212 TCATTAAATCAAGCAAGCTTAGCAAC 59.192 34.615 18.74 0.00 34.50 4.17
2986 3398 3.582714 AATCAAGCAAGCTTAGCAACC 57.417 42.857 18.74 0.00 34.50 3.77
2987 3399 1.979855 TCAAGCAAGCTTAGCAACCA 58.020 45.000 18.74 2.34 34.50 3.67
2988 3400 2.517959 TCAAGCAAGCTTAGCAACCAT 58.482 42.857 18.74 0.44 34.50 3.55
2989 3401 3.684908 TCAAGCAAGCTTAGCAACCATA 58.315 40.909 18.74 1.22 34.50 2.74
2990 3402 4.078537 TCAAGCAAGCTTAGCAACCATAA 58.921 39.130 18.74 0.00 34.50 1.90
2991 3403 4.156556 TCAAGCAAGCTTAGCAACCATAAG 59.843 41.667 18.74 0.00 34.50 1.73
3000 3412 2.369394 AGCAACCATAAGCTAAGCACC 58.631 47.619 0.00 0.00 39.78 5.01
3001 3413 2.025887 AGCAACCATAAGCTAAGCACCT 60.026 45.455 0.00 0.00 39.78 4.00
3002 3414 3.199946 AGCAACCATAAGCTAAGCACCTA 59.800 43.478 0.00 0.00 39.78 3.08
3003 3415 4.137543 GCAACCATAAGCTAAGCACCTAT 58.862 43.478 0.00 0.00 0.00 2.57
3004 3416 4.023707 GCAACCATAAGCTAAGCACCTATG 60.024 45.833 0.00 0.00 0.00 2.23
3017 3429 3.795688 CACCTATGCATTGGGGAGTAT 57.204 47.619 27.42 6.06 0.00 2.12
3018 3430 4.908601 CACCTATGCATTGGGGAGTATA 57.091 45.455 27.42 0.00 0.00 1.47
3019 3431 4.836825 CACCTATGCATTGGGGAGTATAG 58.163 47.826 27.42 5.56 32.40 1.31
3020 3432 4.287067 CACCTATGCATTGGGGAGTATAGT 59.713 45.833 27.42 4.00 31.18 2.12
3021 3433 4.913968 ACCTATGCATTGGGGAGTATAGTT 59.086 41.667 27.42 3.31 31.18 2.24
3022 3434 5.221925 ACCTATGCATTGGGGAGTATAGTTG 60.222 44.000 27.42 2.09 31.18 3.16
3023 3435 2.930950 TGCATTGGGGAGTATAGTTGC 58.069 47.619 0.00 0.00 0.00 4.17
3024 3436 2.509548 TGCATTGGGGAGTATAGTTGCT 59.490 45.455 0.00 0.00 0.00 3.91
3025 3437 3.714280 TGCATTGGGGAGTATAGTTGCTA 59.286 43.478 0.00 0.00 0.00 3.49
3026 3438 4.165180 TGCATTGGGGAGTATAGTTGCTAA 59.835 41.667 0.00 0.00 0.00 3.09
3027 3439 4.757149 GCATTGGGGAGTATAGTTGCTAAG 59.243 45.833 0.00 0.00 0.00 2.18
3028 3440 4.417426 TTGGGGAGTATAGTTGCTAAGC 57.583 45.455 0.00 0.00 0.00 3.09
3029 3441 3.654273 TGGGGAGTATAGTTGCTAAGCT 58.346 45.455 0.00 0.00 0.00 3.74
3030 3442 4.811498 TGGGGAGTATAGTTGCTAAGCTA 58.189 43.478 0.00 0.00 0.00 3.32
3031 3443 5.403512 TGGGGAGTATAGTTGCTAAGCTAT 58.596 41.667 0.00 0.00 0.00 2.97
3032 3444 5.844516 TGGGGAGTATAGTTGCTAAGCTATT 59.155 40.000 0.00 0.00 0.00 1.73
3033 3445 6.329197 TGGGGAGTATAGTTGCTAAGCTATTT 59.671 38.462 0.00 0.00 0.00 1.40
3034 3446 7.511371 TGGGGAGTATAGTTGCTAAGCTATTTA 59.489 37.037 0.00 0.00 0.00 1.40
3035 3447 8.373220 GGGGAGTATAGTTGCTAAGCTATTTAA 58.627 37.037 0.00 0.00 0.00 1.52
3036 3448 9.945904 GGGAGTATAGTTGCTAAGCTATTTAAT 57.054 33.333 0.00 0.00 0.00 1.40
3040 3452 9.813080 GTATAGTTGCTAAGCTATTTAATGTGC 57.187 33.333 0.00 0.00 0.00 4.57
3041 3453 8.682936 ATAGTTGCTAAGCTATTTAATGTGCT 57.317 30.769 0.00 2.44 37.37 4.40
3042 3454 7.396540 AGTTGCTAAGCTATTTAATGTGCTT 57.603 32.000 18.26 18.26 45.94 3.91
3043 3455 8.506168 AGTTGCTAAGCTATTTAATGTGCTTA 57.494 30.769 18.45 18.45 44.08 3.09
3061 3473 3.462021 CTTAGCACCTCATCTAAGCACC 58.538 50.000 0.00 0.00 36.48 5.01
3062 3474 0.543749 AGCACCTCATCTAAGCACCC 59.456 55.000 0.00 0.00 0.00 4.61
3063 3475 0.253044 GCACCTCATCTAAGCACCCA 59.747 55.000 0.00 0.00 0.00 4.51
3064 3476 1.133976 GCACCTCATCTAAGCACCCAT 60.134 52.381 0.00 0.00 0.00 4.00
3065 3477 2.569059 CACCTCATCTAAGCACCCATG 58.431 52.381 0.00 0.00 0.00 3.66
3139 3564 2.226437 CCTTCCAACATCCACAACTTCG 59.774 50.000 0.00 0.00 0.00 3.79
3141 3566 1.202758 TCCAACATCCACAACTTCGCT 60.203 47.619 0.00 0.00 0.00 4.93
3184 3609 0.675633 ACCAGCATTGCACCTTCAAC 59.324 50.000 11.91 0.00 0.00 3.18
3188 3613 0.664166 GCATTGCACCTTCAACCACG 60.664 55.000 3.15 0.00 0.00 4.94
3262 3687 1.536073 GCCCCTTTCCTCTTGGCAAC 61.536 60.000 0.00 0.00 41.76 4.17
3286 3711 0.537188 ACCCGTTCAGCTACAGATGG 59.463 55.000 0.00 0.00 31.33 3.51
3295 3720 2.871022 CAGCTACAGATGGCAATCAGTC 59.129 50.000 1.80 0.00 34.64 3.51
3311 3736 3.879998 TCAGTCGTAGAAGCTCTCATCT 58.120 45.455 0.00 0.00 39.69 2.90
3312 3737 4.265893 TCAGTCGTAGAAGCTCTCATCTT 58.734 43.478 0.00 0.00 39.69 2.40
3316 3741 5.825679 AGTCGTAGAAGCTCTCATCTTGTAT 59.174 40.000 0.00 0.00 39.69 2.29
3318 3743 5.050023 TCGTAGAAGCTCTCATCTTGTATCG 60.050 44.000 0.00 0.00 0.00 2.92
3346 3771 5.014123 TGGTGACCTCCTGTTTGATTCTAAT 59.986 40.000 2.11 0.00 0.00 1.73
3388 3813 3.618351 GTCTGGGTAGAGCTGTAGTGTA 58.382 50.000 0.00 0.00 32.48 2.90
3414 3839 7.232118 AGGTTCAATTCCTCAAAACTATTGG 57.768 36.000 0.00 0.00 0.00 3.16
3466 3891 7.318141 GCTATTGCAATCCAACTATATGCATT 58.682 34.615 16.86 0.00 45.41 3.56
3484 3909 6.357579 TGCATTTATGAATGTGGGAGTTTT 57.642 33.333 11.44 0.00 43.67 2.43
3571 3997 4.385825 TCTTTGAGTGCCGTTTAACATCT 58.614 39.130 0.00 0.00 0.00 2.90
3717 4143 7.014711 TGACTATTATCCTGAGGCAAGTCTTAG 59.985 40.741 14.78 5.43 0.00 2.18
3722 4148 4.610333 TCCTGAGGCAAGTCTTAGTGATA 58.390 43.478 0.00 0.00 0.00 2.15
3900 4327 4.325972 TCATGTATGAAGTCTTGCAAGCA 58.674 39.130 21.99 13.80 33.08 3.91
3912 4339 3.575256 TCTTGCAAGCATTCCAAGTTCAT 59.425 39.130 21.99 0.00 37.72 2.57
3923 4350 6.128472 GCATTCCAAGTTCATTTTCCACATTC 60.128 38.462 0.00 0.00 0.00 2.67
3933 4360 6.380995 TCATTTTCCACATTCTGATGTTTCG 58.619 36.000 0.00 0.00 43.92 3.46
3944 4371 3.189080 TCTGATGTTTCGGTTGCTTCATG 59.811 43.478 0.00 0.00 0.00 3.07
4069 4496 6.492429 GGGTCCTTTAGTGTAAGATTGGTTTT 59.508 38.462 0.00 0.00 0.00 2.43
4438 4924 6.353323 TCAAGGCAAGATTACGAAATATCCA 58.647 36.000 0.00 0.00 0.00 3.41
4787 5699 6.072175 TGACATGCCTAAATGTTAGGTTGTTC 60.072 38.462 17.98 13.83 40.87 3.18
4788 5700 5.185056 ACATGCCTAAATGTTAGGTTGTTCC 59.815 40.000 14.09 0.00 37.50 3.62
4789 5701 4.083565 TGCCTAAATGTTAGGTTGTTCCC 58.916 43.478 14.09 0.00 37.06 3.97
4790 5702 4.202631 TGCCTAAATGTTAGGTTGTTCCCT 60.203 41.667 14.09 0.00 37.06 4.20
4792 5704 4.634443 CCTAAATGTTAGGTTGTTCCCTCG 59.366 45.833 5.97 0.00 35.97 4.63
4793 5705 2.781681 ATGTTAGGTTGTTCCCTCGG 57.218 50.000 0.00 0.00 35.97 4.63
4794 5706 1.719529 TGTTAGGTTGTTCCCTCGGA 58.280 50.000 0.00 0.00 35.97 4.55
4801 5717 3.154710 GGTTGTTCCCTCGGAGAAAAAT 58.845 45.455 6.58 0.00 34.09 1.82
4803 5719 4.763279 GGTTGTTCCCTCGGAGAAAAATAA 59.237 41.667 6.58 0.08 34.09 1.40
4841 5757 2.231529 TCTAGAGCGCCTTATCCTCAC 58.768 52.381 2.29 0.00 0.00 3.51
4865 5781 5.345741 CCATGGCATTTCTTAACAAACTTCG 59.654 40.000 0.00 0.00 0.00 3.79
4907 5823 1.064463 GCCAGGGAATCAGGATCAACA 60.064 52.381 0.00 0.00 0.00 3.33
4909 5825 3.907221 CCAGGGAATCAGGATCAACAAT 58.093 45.455 0.00 0.00 0.00 2.71
5077 5993 2.320745 TCATGGTCTGCATGCACTAG 57.679 50.000 18.46 7.79 0.00 2.57
5096 6012 9.314321 TGCACTAGCTAACATCTATAAAAACTC 57.686 33.333 0.00 0.00 42.74 3.01
5102 6018 8.494433 AGCTAACATCTATAAAAACTCATGGGA 58.506 33.333 0.00 0.00 0.00 4.37
5110 6026 1.523758 AAACTCATGGGACGCTGTTC 58.476 50.000 0.00 0.00 0.00 3.18
5147 6063 1.279271 GTCTCACCATGGTGGCTAGTT 59.721 52.381 38.12 2.95 42.67 2.24
5187 6103 2.364324 TGAGTTGAAACTAGCAGGTCGT 59.636 45.455 0.00 0.00 39.88 4.34
5310 6226 0.950555 TCACTCGCCATCAGCAACAC 60.951 55.000 0.00 0.00 44.04 3.32
5328 6244 4.503741 ACACTTGGAAAATGTTCATCCG 57.496 40.909 0.00 0.00 35.96 4.18
5398 6314 4.286291 AGGAAGACCGAGTAAATCCTTGTT 59.714 41.667 0.00 0.00 41.83 2.83
5583 6499 2.679837 CACAGCCTTATGGTGCTTACAG 59.320 50.000 0.00 0.00 46.55 2.74
5596 6512 5.001232 GGTGCTTACAGTTGTTTCAGGATA 58.999 41.667 0.00 0.00 0.00 2.59
5599 6515 7.201617 GGTGCTTACAGTTGTTTCAGGATATAC 60.202 40.741 0.00 0.00 0.00 1.47
5631 6547 8.584157 AGAATTGTATCATGCTTTTTACCACAA 58.416 29.630 0.00 0.00 0.00 3.33
5649 6565 5.115480 CCACAAAAGTGTTGCACCTTTATT 58.885 37.500 5.82 0.00 35.07 1.40
5663 6579 9.810545 TTGCACCTTTATTAATAAACTTATGGC 57.189 29.630 15.19 12.93 0.00 4.40
5691 6607 8.121708 TGCTTGACTAATTTGCAAAAATTTGAC 58.878 29.630 17.19 8.83 40.55 3.18
5692 6608 8.337532 GCTTGACTAATTTGCAAAAATTTGACT 58.662 29.630 17.19 0.00 40.55 3.41
5693 6609 9.853921 CTTGACTAATTTGCAAAAATTTGACTC 57.146 29.630 17.19 3.85 40.55 3.36
5695 6611 9.376075 TGACTAATTTGCAAAAATTTGACTCAA 57.624 25.926 17.19 2.40 40.55 3.02
5711 6635 9.739276 ATTTGACTCAATTAGTTATGGAAGTGA 57.261 29.630 0.00 0.00 39.07 3.41
5770 6694 5.298276 CACTTGAAACTTTAAGCACCTGGTA 59.702 40.000 0.00 0.00 0.00 3.25
5805 6731 3.335579 AGTTCGGTTAGAATCCAACTGC 58.664 45.455 0.00 0.00 41.49 4.40
5885 7080 9.748708 TTATTGAAGTTCAAAATTGACCAAGAG 57.251 29.630 21.57 0.00 40.12 2.85
5888 7083 7.428020 TGAAGTTCAAAATTGACCAAGAGATG 58.572 34.615 2.20 0.00 36.83 2.90
5901 7096 4.103153 ACCAAGAGATGTCTTTCAAGGACA 59.897 41.667 4.60 4.60 41.40 4.02
5902 7097 4.453819 CCAAGAGATGTCTTTCAAGGACAC 59.546 45.833 4.16 0.00 44.82 3.67
5916 7111 7.786046 TTCAAGGACACCTAGTGAAATAGTA 57.214 36.000 0.96 0.00 36.96 1.82
5923 7118 5.817816 ACACCTAGTGAAATAGTAGCAATGC 59.182 40.000 0.00 0.00 36.96 3.56
5934 7129 9.626045 GAAATAGTAGCAATGCAGTTTTTACTT 57.374 29.630 8.35 0.00 0.00 2.24
5937 7132 7.038154 AGTAGCAATGCAGTTTTTACTTTCA 57.962 32.000 8.35 0.00 0.00 2.69
5938 7133 7.488322 AGTAGCAATGCAGTTTTTACTTTCAA 58.512 30.769 8.35 0.00 0.00 2.69
5939 7134 7.978975 AGTAGCAATGCAGTTTTTACTTTCAAA 59.021 29.630 8.35 0.00 0.00 2.69
5940 7135 7.790823 AGCAATGCAGTTTTTACTTTCAAAT 57.209 28.000 8.35 0.00 0.00 2.32
5941 7136 7.854534 AGCAATGCAGTTTTTACTTTCAAATC 58.145 30.769 8.35 0.00 0.00 2.17
5942 7137 7.712205 AGCAATGCAGTTTTTACTTTCAAATCT 59.288 29.630 8.35 0.00 0.00 2.40
5944 7139 9.853921 CAATGCAGTTTTTACTTTCAAATCTTC 57.146 29.630 0.00 0.00 0.00 2.87
5946 7141 7.551585 TGCAGTTTTTACTTTCAAATCTTCCA 58.448 30.769 0.00 0.00 0.00 3.53
5947 7142 7.491048 TGCAGTTTTTACTTTCAAATCTTCCAC 59.509 33.333 0.00 0.00 0.00 4.02
5948 7143 7.706607 GCAGTTTTTACTTTCAAATCTTCCACT 59.293 33.333 0.00 0.00 0.00 4.00
5949 7144 9.023967 CAGTTTTTACTTTCAAATCTTCCACTG 57.976 33.333 0.00 0.00 0.00 3.66
5950 7145 7.706607 AGTTTTTACTTTCAAATCTTCCACTGC 59.293 33.333 0.00 0.00 0.00 4.40
5951 7146 6.959639 TTTACTTTCAAATCTTCCACTGCT 57.040 33.333 0.00 0.00 0.00 4.24
5952 7147 8.458573 TTTTACTTTCAAATCTTCCACTGCTA 57.541 30.769 0.00 0.00 0.00 3.49
5953 7148 7.672983 TTACTTTCAAATCTTCCACTGCTAG 57.327 36.000 0.00 0.00 0.00 3.42
5954 7149 5.625150 ACTTTCAAATCTTCCACTGCTAGT 58.375 37.500 0.00 0.00 0.00 2.57
5970 7165 3.401002 TGCTAGTGGGGGCCATTATTATT 59.599 43.478 4.39 0.00 35.28 1.40
5971 7166 3.763897 GCTAGTGGGGGCCATTATTATTG 59.236 47.826 4.39 0.00 35.28 1.90
6056 7252 8.475639 TCAGTTATATGTTTCTTACTCACTCCC 58.524 37.037 0.00 0.00 0.00 4.30
6057 7253 8.258007 CAGTTATATGTTTCTTACTCACTCCCA 58.742 37.037 0.00 0.00 0.00 4.37
6065 7261 7.559897 TGTTTCTTACTCACTCCCATTCTTTTT 59.440 33.333 0.00 0.00 0.00 1.94
6088 7284 9.585099 TTTTAGTCTGCATATAAAATTTGGCTG 57.415 29.630 0.00 0.00 0.00 4.85
6092 7288 6.199719 GTCTGCATATAAAATTTGGCTGAAGC 59.800 38.462 0.00 0.00 41.14 3.86
6162 7358 9.877137 GAATATTCACAATACGAAATGTGCATA 57.123 29.630 10.68 11.70 45.08 3.14
6181 7377 9.830975 TGTGCATATATTTATGTAGTGTTCTGT 57.169 29.630 5.26 0.00 37.99 3.41
6194 7390 7.403421 TGTAGTGTTCTGTTTTTATGTGTTCG 58.597 34.615 0.00 0.00 0.00 3.95
6268 7464 0.178987 AGTCCGTGACAGAGTCTGGT 60.179 55.000 23.79 9.75 35.51 4.00
6269 7465 0.241481 GTCCGTGACAGAGTCTGGTC 59.759 60.000 23.79 17.55 35.51 4.02
6270 7466 0.179001 TCCGTGACAGAGTCTGGTCA 60.179 55.000 23.79 19.63 35.51 4.02
6286 7482 6.326064 AGTCTGGTCATCATAGAGTAAGCAAT 59.674 38.462 0.00 0.00 0.00 3.56
6291 7487 7.016563 TGGTCATCATAGAGTAAGCAATACCAT 59.983 37.037 0.00 0.00 34.89 3.55
6292 7488 7.332926 GGTCATCATAGAGTAAGCAATACCATG 59.667 40.741 0.00 0.00 34.89 3.66
6312 7509 5.712004 CATGTTGTGGATTTCAATGCTGTA 58.288 37.500 0.00 0.00 0.00 2.74
6317 7514 6.682423 TGTGGATTTCAATGCTGTATACAG 57.318 37.500 25.68 25.68 46.40 2.74
6376 7573 9.527157 TTGAATTGTGATCTAAAAGGGACATTA 57.473 29.630 0.00 0.00 0.00 1.90
6390 7587 4.141251 AGGGACATTAAGTGTTTGACCTGT 60.141 41.667 0.00 0.00 42.36 4.00
6396 7593 5.607939 TTAAGTGTTTGACCTGTCTCTGA 57.392 39.130 0.00 0.00 0.00 3.27
6403 7600 5.485353 TGTTTGACCTGTCTCTGAGGATATT 59.515 40.000 4.59 0.00 34.37 1.28
6407 7604 5.485353 TGACCTGTCTCTGAGGATATTTGTT 59.515 40.000 4.59 0.00 34.37 2.83
6421 7618 8.732746 AGGATATTTGTTCTAGTATGCGTTTT 57.267 30.769 0.00 0.00 0.00 2.43
6459 7656 8.514330 TGGCTTATATTCGAGGTTAATTTTGT 57.486 30.769 0.00 0.00 0.00 2.83
6475 7672 5.751243 ATTTTGTGAGACTAACGTTTGCT 57.249 34.783 5.91 6.25 0.00 3.91
6476 7673 4.530094 TTTGTGAGACTAACGTTTGCTG 57.470 40.909 5.91 0.00 0.00 4.41
6477 7674 1.864711 TGTGAGACTAACGTTTGCTGC 59.135 47.619 5.91 0.00 0.00 5.25
6518 7715 5.241728 GGTGCAGAGAAGGAAATTTTGTACT 59.758 40.000 0.00 0.00 0.00 2.73
6757 7954 6.071334 CCCTGGAAGATAACTGAATATAGCGA 60.071 42.308 0.00 0.00 34.07 4.93
6758 7955 7.378966 CCTGGAAGATAACTGAATATAGCGAA 58.621 38.462 0.00 0.00 34.07 4.70
6759 7956 7.543868 CCTGGAAGATAACTGAATATAGCGAAG 59.456 40.741 0.00 0.00 34.07 3.79
6760 7957 8.178313 TGGAAGATAACTGAATATAGCGAAGA 57.822 34.615 0.00 0.00 0.00 2.87
6761 7958 8.807118 TGGAAGATAACTGAATATAGCGAAGAT 58.193 33.333 0.00 0.00 0.00 2.40
6769 7966 9.988815 AACTGAATATAGCGAAGATAACTGAAT 57.011 29.630 0.00 0.00 0.00 2.57
6775 7972 9.885934 ATATAGCGAAGATAACTGAATATAGCG 57.114 33.333 0.00 0.00 0.00 4.26
6802 7999 7.429340 CGGCTTATATACAGCAAAAGAAAGTTG 59.571 37.037 14.68 0.00 39.21 3.16
6835 8032 1.151668 GACGCACAGCTCATGTTCTT 58.848 50.000 0.00 0.00 41.41 2.52
6837 8034 1.265095 ACGCACAGCTCATGTTCTTTG 59.735 47.619 0.00 0.00 41.41 2.77
7023 8620 6.351881 CCCTACTTTCAGAGTAAGCAATACCA 60.352 42.308 0.00 0.00 40.25 3.25
7092 8725 5.105756 ACAAACTAAATAAGCAGGACATGGC 60.106 40.000 0.00 0.00 0.00 4.40
7098 8731 4.465512 GCAGGACATGGCGTTGCG 62.466 66.667 10.46 0.00 0.00 4.85
7152 8786 4.098914 AGTTCATTTTGTACAGCCCTGA 57.901 40.909 1.69 0.00 0.00 3.86
7158 8792 2.543777 TTGTACAGCCCTGAGTTGTC 57.456 50.000 1.69 0.00 39.45 3.18
7161 8795 1.070134 GTACAGCCCTGAGTTGTCACA 59.930 52.381 1.69 0.00 39.45 3.58
7191 8828 2.617788 CCATCGTTCCATGGGTTCTCAA 60.618 50.000 13.02 0.00 39.95 3.02
7260 8905 5.241506 TGGACAAACCTCTTTTATTGAGCAG 59.758 40.000 0.00 0.00 39.86 4.24
7318 8963 2.565841 GCATGTTGAGGGAGTGGTATC 58.434 52.381 0.00 0.00 0.00 2.24
7344 8989 2.359107 CGGTGAGCTGTGTGGCAT 60.359 61.111 0.00 0.00 34.17 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.104111 TGCCTAAGCACCGCTACAATAT 59.896 45.455 0.00 0.00 46.52 1.28
1 2 1.483004 TGCCTAAGCACCGCTACAATA 59.517 47.619 0.00 0.00 46.52 1.90
2 3 0.251916 TGCCTAAGCACCGCTACAAT 59.748 50.000 0.00 0.00 46.52 2.71
20 21 2.047655 TACCGTCGCAGGGCTTTG 60.048 61.111 1.26 0.00 35.02 2.77
21 22 1.252904 TACTACCGTCGCAGGGCTTT 61.253 55.000 1.26 0.00 35.02 3.51
22 23 1.679977 TACTACCGTCGCAGGGCTT 60.680 57.895 1.26 0.00 35.02 4.35
23 24 2.044650 TACTACCGTCGCAGGGCT 60.045 61.111 1.26 0.00 35.02 5.19
24 25 2.012902 ATGTACTACCGTCGCAGGGC 62.013 60.000 0.00 0.00 35.02 5.19
25 26 0.030369 GATGTACTACCGTCGCAGGG 59.970 60.000 0.00 0.00 35.02 4.45
26 27 0.736636 TGATGTACTACCGTCGCAGG 59.263 55.000 0.00 0.00 37.30 4.85
27 28 2.096980 TCTTGATGTACTACCGTCGCAG 59.903 50.000 0.00 0.00 0.00 5.18
28 29 2.086094 TCTTGATGTACTACCGTCGCA 58.914 47.619 0.00 0.00 0.00 5.10
29 30 2.838386 TCTTGATGTACTACCGTCGC 57.162 50.000 0.00 0.00 0.00 5.19
30 31 3.002042 ACGATCTTGATGTACTACCGTCG 59.998 47.826 0.00 0.00 0.00 5.12
31 32 4.034858 TGACGATCTTGATGTACTACCGTC 59.965 45.833 0.00 0.00 42.59 4.79
32 33 3.943381 TGACGATCTTGATGTACTACCGT 59.057 43.478 0.00 0.00 0.00 4.83
33 34 4.280461 GTGACGATCTTGATGTACTACCG 58.720 47.826 0.00 0.00 0.00 4.02
34 35 4.097437 TGGTGACGATCTTGATGTACTACC 59.903 45.833 0.00 0.00 0.00 3.18
35 36 5.035443 GTGGTGACGATCTTGATGTACTAC 58.965 45.833 0.00 0.00 0.00 2.73
36 37 5.244785 GTGGTGACGATCTTGATGTACTA 57.755 43.478 0.00 0.00 0.00 1.82
37 38 4.111375 GTGGTGACGATCTTGATGTACT 57.889 45.455 0.00 0.00 0.00 2.73
64 65 1.137513 GGAAGAGTTCCGTCAACACG 58.862 55.000 0.00 0.00 46.29 4.49
74 75 3.988517 CAGTAAAGTGTCGGGAAGAGTTC 59.011 47.826 0.00 0.00 0.00 3.01
75 76 3.244112 CCAGTAAAGTGTCGGGAAGAGTT 60.244 47.826 0.00 0.00 0.00 3.01
76 77 2.299297 CCAGTAAAGTGTCGGGAAGAGT 59.701 50.000 0.00 0.00 0.00 3.24
77 78 2.561419 TCCAGTAAAGTGTCGGGAAGAG 59.439 50.000 0.00 0.00 0.00 2.85
78 79 2.600790 TCCAGTAAAGTGTCGGGAAGA 58.399 47.619 0.00 0.00 0.00 2.87
79 80 3.522553 GATCCAGTAAAGTGTCGGGAAG 58.477 50.000 0.00 0.00 32.43 3.46
80 81 2.094390 CGATCCAGTAAAGTGTCGGGAA 60.094 50.000 0.00 0.00 32.43 3.97
81 82 1.475280 CGATCCAGTAAAGTGTCGGGA 59.525 52.381 0.00 0.00 33.11 5.14
82 83 1.470979 CCGATCCAGTAAAGTGTCGGG 60.471 57.143 8.32 0.00 43.47 5.14
83 84 1.922570 CCGATCCAGTAAAGTGTCGG 58.077 55.000 0.00 0.00 41.98 4.79
84 85 2.163815 ACTCCGATCCAGTAAAGTGTCG 59.836 50.000 0.00 0.00 0.00 4.35
85 86 3.512680 CACTCCGATCCAGTAAAGTGTC 58.487 50.000 0.00 0.00 31.69 3.67
86 87 2.353803 GCACTCCGATCCAGTAAAGTGT 60.354 50.000 0.00 0.00 37.15 3.55
87 88 2.271800 GCACTCCGATCCAGTAAAGTG 58.728 52.381 0.00 0.00 37.70 3.16
88 89 1.135083 CGCACTCCGATCCAGTAAAGT 60.135 52.381 0.00 0.00 40.02 2.66
89 90 1.560923 CGCACTCCGATCCAGTAAAG 58.439 55.000 0.00 0.00 40.02 1.85
90 91 0.174845 CCGCACTCCGATCCAGTAAA 59.825 55.000 0.00 0.00 40.02 2.01
91 92 1.672854 CCCGCACTCCGATCCAGTAA 61.673 60.000 0.00 0.00 40.02 2.24
92 93 2.125326 CCCGCACTCCGATCCAGTA 61.125 63.158 0.00 0.00 40.02 2.74
93 94 3.461773 CCCGCACTCCGATCCAGT 61.462 66.667 0.00 0.00 40.02 4.00
94 95 4.227134 CCCCGCACTCCGATCCAG 62.227 72.222 0.00 0.00 40.02 3.86
95 96 4.770362 TCCCCGCACTCCGATCCA 62.770 66.667 0.00 0.00 40.02 3.41
96 97 3.227792 GATCCCCGCACTCCGATCC 62.228 68.421 0.00 0.00 40.02 3.36
97 98 2.340443 GATCCCCGCACTCCGATC 59.660 66.667 0.00 0.00 40.02 3.69
98 99 3.606662 CGATCCCCGCACTCCGAT 61.607 66.667 0.00 0.00 40.02 4.18
100 101 2.083835 ATAACGATCCCCGCACTCCG 62.084 60.000 0.00 0.00 43.32 4.63
101 102 0.319641 GATAACGATCCCCGCACTCC 60.320 60.000 0.00 0.00 43.32 3.85
102 103 0.663568 CGATAACGATCCCCGCACTC 60.664 60.000 0.00 0.00 43.32 3.51
103 104 1.105167 TCGATAACGATCCCCGCACT 61.105 55.000 0.00 0.00 43.81 4.40
104 105 1.361271 TCGATAACGATCCCCGCAC 59.639 57.895 0.00 0.00 43.81 5.34
105 106 3.844741 TCGATAACGATCCCCGCA 58.155 55.556 0.00 0.00 43.81 5.69
109 110 3.168870 CGTTCAGCTCGATAACGATCCC 61.169 54.545 13.81 0.00 46.66 3.85
110 111 2.044860 CGTTCAGCTCGATAACGATCC 58.955 52.381 13.81 0.00 46.66 3.36
111 112 2.464380 CACGTTCAGCTCGATAACGATC 59.536 50.000 21.48 0.00 46.66 3.69
112 113 2.159421 ACACGTTCAGCTCGATAACGAT 60.159 45.455 21.48 11.18 46.66 3.73
113 114 1.198408 ACACGTTCAGCTCGATAACGA 59.802 47.619 21.48 0.00 46.66 3.85
115 116 1.059264 GCACACGTTCAGCTCGATAAC 59.941 52.381 0.00 0.00 0.00 1.89
116 117 1.067846 AGCACACGTTCAGCTCGATAA 60.068 47.619 0.00 0.00 32.05 1.75
117 118 0.526211 AGCACACGTTCAGCTCGATA 59.474 50.000 0.00 0.00 32.05 2.92
118 119 0.526211 TAGCACACGTTCAGCTCGAT 59.474 50.000 9.17 0.00 39.68 3.59
119 120 0.109735 CTAGCACACGTTCAGCTCGA 60.110 55.000 9.17 0.00 39.68 4.04
120 121 0.109735 TCTAGCACACGTTCAGCTCG 60.110 55.000 9.17 4.49 39.68 5.03
121 122 1.721926 GTTCTAGCACACGTTCAGCTC 59.278 52.381 9.17 0.00 39.68 4.09
122 123 1.784525 GTTCTAGCACACGTTCAGCT 58.215 50.000 10.52 10.52 42.14 4.24
123 124 0.435008 CGTTCTAGCACACGTTCAGC 59.565 55.000 0.00 0.00 0.00 4.26
124 125 0.435008 GCGTTCTAGCACACGTTCAG 59.565 55.000 9.70 0.00 38.70 3.02
125 126 1.272784 CGCGTTCTAGCACACGTTCA 61.273 55.000 0.00 0.00 38.70 3.18
126 127 1.411089 CGCGTTCTAGCACACGTTC 59.589 57.895 0.00 0.00 38.70 3.95
127 128 2.654912 GCGCGTTCTAGCACACGTT 61.655 57.895 8.43 0.00 38.70 3.99
128 129 3.103911 GCGCGTTCTAGCACACGT 61.104 61.111 8.43 0.00 38.70 4.49
129 130 3.103289 TGCGCGTTCTAGCACACG 61.103 61.111 8.43 0.00 38.59 4.49
133 134 2.803670 GTCGTGCGCGTTCTAGCA 60.804 61.111 20.50 0.00 41.55 3.49
134 135 2.504244 AGTCGTGCGCGTTCTAGC 60.504 61.111 20.50 4.52 39.49 3.42
135 136 2.152699 CCAGTCGTGCGCGTTCTAG 61.153 63.158 20.50 8.83 39.49 2.43
136 137 2.126618 CCAGTCGTGCGCGTTCTA 60.127 61.111 20.50 0.00 39.49 2.10
434 442 2.203998 CCTCCACCACCACCTCCT 60.204 66.667 0.00 0.00 0.00 3.69
605 613 1.799519 CGCAGCTAGATCCGATCGC 60.800 63.158 10.32 1.85 0.00 4.58
628 636 2.202932 CCTCGGGAATCACGCAGG 60.203 66.667 0.00 4.47 0.00 4.85
774 782 4.750098 CCAAATTATCCGCAACGAGTAGAT 59.250 41.667 0.00 0.00 0.00 1.98
822 830 7.659390 CAGGTTAGAACTGAATTCAGAGAGTTT 59.341 37.037 36.15 21.88 46.59 2.66
856 864 4.682860 TCCGTTTATTTTCGTGAGAGACAC 59.317 41.667 0.00 0.00 43.69 3.67
867 875 8.241367 ACCAACACAGATTATCCGTTTATTTTC 58.759 33.333 0.00 0.00 0.00 2.29
943 954 6.072230 TCAGCCTATTCTAGAACTGATGATCG 60.072 42.308 15.81 0.00 35.37 3.69
1012 1023 3.848272 ACAGAACAACCAACAACAGTG 57.152 42.857 0.00 0.00 0.00 3.66
1013 1024 3.945285 CCTACAGAACAACCAACAACAGT 59.055 43.478 0.00 0.00 0.00 3.55
1039 1050 3.440872 TGCATTGTATCCGTTAAACCCAC 59.559 43.478 0.00 0.00 0.00 4.61
1075 1086 6.175471 TCTCTGAAACAGCACATCATAACAT 58.825 36.000 0.00 0.00 0.00 2.71
1110 1125 7.671398 TCATTACTGACAGATATCTCTATGCCA 59.329 37.037 10.08 0.00 0.00 4.92
1176 1191 1.073722 CCTCCTGTGCTTTGGCTCA 59.926 57.895 0.00 0.00 39.25 4.26
1329 1344 3.575351 GAACGAGCTGACCGCCTGT 62.575 63.158 0.00 0.00 40.39 4.00
1420 1435 5.335583 CCAATACGAAGCAAAGTTTCATCCA 60.336 40.000 0.00 0.00 0.00 3.41
1435 1450 3.880490 ACAGCTGAAAACACCAATACGAA 59.120 39.130 23.35 0.00 0.00 3.85
1493 1508 5.717119 AGCTTTCAAAAATCTGCATACCAG 58.283 37.500 0.00 0.00 43.17 4.00
1494 1509 5.726980 AGCTTTCAAAAATCTGCATACCA 57.273 34.783 0.00 0.00 0.00 3.25
1495 1510 7.088589 TCTAGCTTTCAAAAATCTGCATACC 57.911 36.000 0.00 0.00 0.00 2.73
1496 1511 8.970691 TTTCTAGCTTTCAAAAATCTGCATAC 57.029 30.769 0.00 0.00 0.00 2.39
1497 1512 8.796475 ACTTTCTAGCTTTCAAAAATCTGCATA 58.204 29.630 0.00 0.00 0.00 3.14
1498 1513 7.664758 ACTTTCTAGCTTTCAAAAATCTGCAT 58.335 30.769 0.00 0.00 0.00 3.96
1499 1514 7.042797 ACTTTCTAGCTTTCAAAAATCTGCA 57.957 32.000 0.00 0.00 0.00 4.41
1528 1543 1.919918 TTTGTGCTGCCTTTTCAACG 58.080 45.000 0.00 0.00 0.00 4.10
1645 1660 7.161404 TGCATCTAAATCTGTACAGTGTTTCT 58.839 34.615 21.99 10.12 0.00 2.52
1690 1706 1.407258 GGCAAATTATACGGCAGGCAA 59.593 47.619 0.00 0.00 0.00 4.52
1698 1714 6.740905 CACAACACTGTAAGGCAAATTATACG 59.259 38.462 0.00 0.00 39.30 3.06
1699 1715 6.526674 GCACAACACTGTAAGGCAAATTATAC 59.473 38.462 0.00 0.00 39.30 1.47
1720 1736 4.081476 AGTTAGCTGTCATCAGTATGCACA 60.081 41.667 0.00 0.00 43.05 4.57
1864 1880 5.356426 GTTTGCACAAGTTTATTGGGTTCT 58.644 37.500 0.00 0.00 0.00 3.01
2060 2076 0.581053 AAACAAAAATTGCTGGCGCG 59.419 45.000 0.00 0.00 39.65 6.86
2061 2077 2.031437 TCAAAACAAAAATTGCTGGCGC 59.969 40.909 0.00 0.00 0.00 6.53
2092 2108 8.691797 ACACTTCCTTTTGCTATTTTTCTTACA 58.308 29.630 0.00 0.00 0.00 2.41
2102 2118 6.507023 CAAAGACAACACTTCCTTTTGCTAT 58.493 36.000 0.00 0.00 0.00 2.97
2165 2181 8.593945 AGCCTAACAAATAATTCAATGGAAGA 57.406 30.769 0.00 0.00 36.25 2.87
2220 2237 9.778741 AACAATGTTTCTGACTTCTGATAACTA 57.221 29.630 0.00 0.00 0.00 2.24
2229 2246 6.564328 ACAGGAAAACAATGTTTCTGACTTC 58.436 36.000 24.85 13.43 37.60 3.01
2232 2249 5.743872 GTGACAGGAAAACAATGTTTCTGAC 59.256 40.000 24.85 20.60 37.60 3.51
2274 2291 8.349568 TCCAGTTGTATCGTAGCATATTATCT 57.650 34.615 0.00 0.00 0.00 1.98
2275 2292 8.981724 TTCCAGTTGTATCGTAGCATATTATC 57.018 34.615 0.00 0.00 0.00 1.75
2287 2304 6.148948 TCTGCAAAAATTTCCAGTTGTATCG 58.851 36.000 11.08 0.00 0.00 2.92
2306 2323 8.123639 AGAGTGTAAGAGTTATAACTTCTGCA 57.876 34.615 18.96 14.79 39.88 4.41
2316 2333 7.120051 TGAGAGGCTAAGAGTGTAAGAGTTAT 58.880 38.462 0.00 0.00 0.00 1.89
2326 2343 1.859302 ACCCTGAGAGGCTAAGAGTG 58.141 55.000 0.00 0.00 32.73 3.51
2328 2345 2.312390 GGTACCCTGAGAGGCTAAGAG 58.688 57.143 0.00 0.00 32.73 2.85
2329 2346 2.456073 GGTACCCTGAGAGGCTAAGA 57.544 55.000 0.00 0.00 32.73 2.10
2337 2354 8.341945 ATTTTTGTTAAAACGGGTACCCTGAGA 61.342 37.037 28.45 7.32 39.23 3.27
2338 2355 6.239092 ATTTTTGTTAAAACGGGTACCCTGAG 60.239 38.462 28.45 15.66 39.23 3.35
2339 2356 5.597594 ATTTTTGTTAAAACGGGTACCCTGA 59.402 36.000 28.45 3.68 39.23 3.86
2340 2357 5.692654 CATTTTTGTTAAAACGGGTACCCTG 59.307 40.000 28.45 22.54 39.23 4.45
2341 2358 5.363292 ACATTTTTGTTAAAACGGGTACCCT 59.637 36.000 28.45 12.51 39.23 4.34
2342 2359 5.462729 CACATTTTTGTTAAAACGGGTACCC 59.537 40.000 22.19 22.19 39.23 3.69
2343 2360 6.198778 GTCACATTTTTGTTAAAACGGGTACC 59.801 38.462 2.17 2.17 39.11 3.34
2344 2361 6.974048 AGTCACATTTTTGTTAAAACGGGTAC 59.026 34.615 0.00 0.00 36.15 3.34
2345 2362 7.098074 AGTCACATTTTTGTTAAAACGGGTA 57.902 32.000 0.00 0.00 36.15 3.69
2346 2363 5.968254 AGTCACATTTTTGTTAAAACGGGT 58.032 33.333 0.00 0.00 36.15 5.28
2347 2364 8.484008 CAATAGTCACATTTTTGTTAAAACGGG 58.516 33.333 0.00 0.00 36.15 5.28
2348 2365 8.484008 CCAATAGTCACATTTTTGTTAAAACGG 58.516 33.333 0.00 0.00 36.15 4.44
2349 2366 8.484008 CCCAATAGTCACATTTTTGTTAAAACG 58.516 33.333 0.00 0.00 36.15 3.60
2350 2367 9.535878 TCCCAATAGTCACATTTTTGTTAAAAC 57.464 29.630 0.00 0.00 36.15 2.43
2354 2371 9.703892 CAAATCCCAATAGTCACATTTTTGTTA 57.296 29.630 0.00 0.00 0.00 2.41
2355 2372 8.210265 ACAAATCCCAATAGTCACATTTTTGTT 58.790 29.630 0.00 0.00 31.60 2.83
2356 2373 7.656948 CACAAATCCCAATAGTCACATTTTTGT 59.343 33.333 0.00 0.00 34.83 2.83
2357 2374 7.871973 TCACAAATCCCAATAGTCACATTTTTG 59.128 33.333 0.00 0.00 0.00 2.44
2439 2456 2.420547 GCATCCTAGCTGATGTGGTCAA 60.421 50.000 13.80 0.00 43.28 3.18
2444 2461 2.219458 CCAAGCATCCTAGCTGATGTG 58.781 52.381 13.80 6.74 45.89 3.21
2446 2463 2.219458 CACCAAGCATCCTAGCTGATG 58.781 52.381 9.20 9.20 45.89 3.07
2449 2466 1.099879 GCCACCAAGCATCCTAGCTG 61.100 60.000 0.00 0.00 45.89 4.24
2451 2468 1.077501 TGCCACCAAGCATCCTAGC 60.078 57.895 0.00 0.00 38.00 3.42
2535 2552 2.428544 TCTGGACAGAGTAGGAGCTC 57.571 55.000 4.71 4.71 35.82 4.09
2538 2555 8.239038 TGTATTTTATCTGGACAGAGTAGGAG 57.761 38.462 8.14 0.00 41.33 3.69
2539 2556 8.603898 TTGTATTTTATCTGGACAGAGTAGGA 57.396 34.615 8.14 0.00 41.33 2.94
2540 2557 9.265901 CATTGTATTTTATCTGGACAGAGTAGG 57.734 37.037 8.14 0.00 41.33 3.18
2609 2630 9.178758 AGACATTCCCTTCTAATACAAAATGAC 57.821 33.333 0.00 0.00 0.00 3.06
2661 3072 6.735678 TTGCTTCCCTTTCTTTTGTTTTTC 57.264 33.333 0.00 0.00 0.00 2.29
2667 3078 3.805971 CAGCTTTGCTTCCCTTTCTTTTG 59.194 43.478 0.00 0.00 36.40 2.44
2700 3112 1.122227 TGCCTTTCTTTTGCTTGCCT 58.878 45.000 0.00 0.00 0.00 4.75
2701 3113 1.952193 TTGCCTTTCTTTTGCTTGCC 58.048 45.000 0.00 0.00 0.00 4.52
2765 3177 4.802051 TGGAGCATTGCGAGGGGC 62.802 66.667 2.38 0.00 43.96 5.80
2766 3178 2.825836 GTGGAGCATTGCGAGGGG 60.826 66.667 2.38 0.00 0.00 4.79
2767 3179 2.825836 GGTGGAGCATTGCGAGGG 60.826 66.667 2.38 0.00 0.00 4.30
2768 3180 1.377725 AAGGTGGAGCATTGCGAGG 60.378 57.895 2.38 0.00 0.00 4.63
2769 3181 0.957395 ACAAGGTGGAGCATTGCGAG 60.957 55.000 2.38 0.00 42.07 5.03
2770 3182 0.323302 TACAAGGTGGAGCATTGCGA 59.677 50.000 2.38 0.00 42.07 5.10
2771 3183 0.447801 GTACAAGGTGGAGCATTGCG 59.552 55.000 2.38 0.00 42.07 4.85
2772 3184 1.470098 CTGTACAAGGTGGAGCATTGC 59.530 52.381 0.00 0.00 42.07 3.56
2773 3185 2.086869 CCTGTACAAGGTGGAGCATTG 58.913 52.381 0.00 0.00 43.74 2.82
2774 3186 2.496899 CCTGTACAAGGTGGAGCATT 57.503 50.000 0.00 0.00 41.74 3.56
2784 3196 2.770164 AGGCTTAGCACCTGTACAAG 57.230 50.000 6.53 0.00 35.72 3.16
2785 3197 2.290071 GGAAGGCTTAGCACCTGTACAA 60.290 50.000 6.53 0.00 37.67 2.41
2786 3198 1.278127 GGAAGGCTTAGCACCTGTACA 59.722 52.381 6.53 0.00 37.67 2.90
2787 3199 1.278127 TGGAAGGCTTAGCACCTGTAC 59.722 52.381 6.53 0.00 37.67 2.90
2788 3200 1.278127 GTGGAAGGCTTAGCACCTGTA 59.722 52.381 6.53 0.00 37.67 2.74
2789 3201 0.036875 GTGGAAGGCTTAGCACCTGT 59.963 55.000 6.53 0.00 37.67 4.00
2790 3202 0.036732 TGTGGAAGGCTTAGCACCTG 59.963 55.000 6.53 0.00 37.67 4.00
2791 3203 0.995024 ATGTGGAAGGCTTAGCACCT 59.005 50.000 6.53 0.00 40.02 4.00
2792 3204 2.565841 CTATGTGGAAGGCTTAGCACC 58.434 52.381 6.53 6.95 0.00 5.01
2793 3205 2.565841 CCTATGTGGAAGGCTTAGCAC 58.434 52.381 6.53 0.00 38.35 4.40
2816 3228 6.515272 AATAACTCGCCACATCAGATTTTT 57.485 33.333 0.00 0.00 0.00 1.94
2817 3229 6.515272 AAATAACTCGCCACATCAGATTTT 57.485 33.333 0.00 0.00 0.00 1.82
2818 3230 7.552687 TCTTAAATAACTCGCCACATCAGATTT 59.447 33.333 0.00 0.00 0.00 2.17
2819 3231 7.047891 TCTTAAATAACTCGCCACATCAGATT 58.952 34.615 0.00 0.00 0.00 2.40
2820 3232 6.582636 TCTTAAATAACTCGCCACATCAGAT 58.417 36.000 0.00 0.00 0.00 2.90
2821 3233 5.972935 TCTTAAATAACTCGCCACATCAGA 58.027 37.500 0.00 0.00 0.00 3.27
2822 3234 6.535150 TCTTCTTAAATAACTCGCCACATCAG 59.465 38.462 0.00 0.00 0.00 2.90
2823 3235 6.403049 TCTTCTTAAATAACTCGCCACATCA 58.597 36.000 0.00 0.00 0.00 3.07
2824 3236 6.757010 TCTCTTCTTAAATAACTCGCCACATC 59.243 38.462 0.00 0.00 0.00 3.06
2825 3237 6.640518 TCTCTTCTTAAATAACTCGCCACAT 58.359 36.000 0.00 0.00 0.00 3.21
2826 3238 6.032956 TCTCTTCTTAAATAACTCGCCACA 57.967 37.500 0.00 0.00 0.00 4.17
2827 3239 6.331061 TCTCTCTTCTTAAATAACTCGCCAC 58.669 40.000 0.00 0.00 0.00 5.01
2828 3240 6.377429 TCTCTCTCTTCTTAAATAACTCGCCA 59.623 38.462 0.00 0.00 0.00 5.69
2829 3241 6.797454 TCTCTCTCTTCTTAAATAACTCGCC 58.203 40.000 0.00 0.00 0.00 5.54
2830 3242 7.699566 TCTCTCTCTCTTCTTAAATAACTCGC 58.300 38.462 0.00 0.00 0.00 5.03
2831 3243 9.663904 CATCTCTCTCTCTTCTTAAATAACTCG 57.336 37.037 0.00 0.00 0.00 4.18
2836 3248 9.693739 ACACTCATCTCTCTCTCTTCTTAAATA 57.306 33.333 0.00 0.00 0.00 1.40
2837 3249 8.469200 CACACTCATCTCTCTCTCTTCTTAAAT 58.531 37.037 0.00 0.00 0.00 1.40
2838 3250 7.093988 CCACACTCATCTCTCTCTCTTCTTAAA 60.094 40.741 0.00 0.00 0.00 1.52
2839 3251 6.376864 CCACACTCATCTCTCTCTCTTCTTAA 59.623 42.308 0.00 0.00 0.00 1.85
2840 3252 5.885352 CCACACTCATCTCTCTCTCTTCTTA 59.115 44.000 0.00 0.00 0.00 2.10
2841 3253 4.706476 CCACACTCATCTCTCTCTCTTCTT 59.294 45.833 0.00 0.00 0.00 2.52
2842 3254 4.263905 ACCACACTCATCTCTCTCTCTTCT 60.264 45.833 0.00 0.00 0.00 2.85
2843 3255 4.016444 ACCACACTCATCTCTCTCTCTTC 58.984 47.826 0.00 0.00 0.00 2.87
2844 3256 3.763360 CACCACACTCATCTCTCTCTCTT 59.237 47.826 0.00 0.00 0.00 2.85
2845 3257 3.010027 TCACCACACTCATCTCTCTCTCT 59.990 47.826 0.00 0.00 0.00 3.10
2846 3258 3.128589 GTCACCACACTCATCTCTCTCTC 59.871 52.174 0.00 0.00 0.00 3.20
2847 3259 3.088532 GTCACCACACTCATCTCTCTCT 58.911 50.000 0.00 0.00 0.00 3.10
2848 3260 2.165437 GGTCACCACACTCATCTCTCTC 59.835 54.545 0.00 0.00 0.00 3.20
2849 3261 2.175202 GGTCACCACACTCATCTCTCT 58.825 52.381 0.00 0.00 0.00 3.10
2850 3262 1.205893 GGGTCACCACACTCATCTCTC 59.794 57.143 0.00 0.00 36.50 3.20
2851 3263 1.270907 GGGTCACCACACTCATCTCT 58.729 55.000 0.00 0.00 36.50 3.10
2852 3264 0.250513 GGGGTCACCACACTCATCTC 59.749 60.000 0.00 0.00 39.85 2.75
2853 3265 0.473694 TGGGGTCACCACACTCATCT 60.474 55.000 0.00 0.00 46.80 2.90
2854 3266 0.036010 CTGGGGTCACCACACTCATC 60.036 60.000 0.00 0.00 46.80 2.92
2855 3267 1.492133 CCTGGGGTCACCACACTCAT 61.492 60.000 0.00 0.00 46.80 2.90
2856 3268 2.146724 CCTGGGGTCACCACACTCA 61.147 63.158 0.00 0.00 46.80 3.41
2857 3269 1.415672 TTCCTGGGGTCACCACACTC 61.416 60.000 0.00 0.00 46.80 3.51
2858 3270 1.385347 TTCCTGGGGTCACCACACT 60.385 57.895 0.00 0.00 46.80 3.55
2859 3271 1.073199 CTTCCTGGGGTCACCACAC 59.927 63.158 0.00 0.00 46.80 3.82
2860 3272 0.696143 TTCTTCCTGGGGTCACCACA 60.696 55.000 0.00 0.00 46.80 4.17
2861 3273 0.476771 TTTCTTCCTGGGGTCACCAC 59.523 55.000 0.00 0.00 46.80 4.16
2863 3275 0.605589 CGTTTCTTCCTGGGGTCACC 60.606 60.000 0.00 0.00 40.81 4.02
2864 3276 0.395312 TCGTTTCTTCCTGGGGTCAC 59.605 55.000 0.00 0.00 0.00 3.67
2865 3277 1.003118 CATCGTTTCTTCCTGGGGTCA 59.997 52.381 0.00 0.00 0.00 4.02
2866 3278 1.739067 CATCGTTTCTTCCTGGGGTC 58.261 55.000 0.00 0.00 0.00 4.46
2867 3279 0.322546 GCATCGTTTCTTCCTGGGGT 60.323 55.000 0.00 0.00 0.00 4.95
2868 3280 0.035056 AGCATCGTTTCTTCCTGGGG 60.035 55.000 0.00 0.00 0.00 4.96
2869 3281 2.691409 TAGCATCGTTTCTTCCTGGG 57.309 50.000 0.00 0.00 0.00 4.45
2870 3282 2.352960 GCTTAGCATCGTTTCTTCCTGG 59.647 50.000 0.00 0.00 0.00 4.45
2871 3283 2.029728 CGCTTAGCATCGTTTCTTCCTG 59.970 50.000 4.70 0.00 0.00 3.86
2872 3284 2.271800 CGCTTAGCATCGTTTCTTCCT 58.728 47.619 4.70 0.00 0.00 3.36
2873 3285 2.721129 CGCTTAGCATCGTTTCTTCC 57.279 50.000 4.70 0.00 0.00 3.46
2885 3297 1.146358 CCTAGGTTCACGCGCTTAGC 61.146 60.000 5.73 0.23 43.95 3.09
2886 3298 1.146358 GCCTAGGTTCACGCGCTTAG 61.146 60.000 11.31 0.00 0.00 2.18
2887 3299 1.153706 GCCTAGGTTCACGCGCTTA 60.154 57.895 11.31 0.00 0.00 3.09
2888 3300 2.434359 GCCTAGGTTCACGCGCTT 60.434 61.111 11.31 0.00 0.00 4.68
2889 3301 2.725203 TTTGCCTAGGTTCACGCGCT 62.725 55.000 11.31 0.00 0.00 5.92
2890 3302 1.847890 TTTTGCCTAGGTTCACGCGC 61.848 55.000 11.31 0.00 0.00 6.86
2891 3303 0.110373 GTTTTGCCTAGGTTCACGCG 60.110 55.000 11.31 3.53 0.00 6.01
2892 3304 0.948678 TGTTTTGCCTAGGTTCACGC 59.051 50.000 11.31 0.00 0.00 5.34
2893 3305 3.915437 AATGTTTTGCCTAGGTTCACG 57.085 42.857 11.31 0.00 0.00 4.35
2894 3306 6.645003 CCTTTAAATGTTTTGCCTAGGTTCAC 59.355 38.462 11.31 3.25 0.00 3.18
2895 3307 6.551601 TCCTTTAAATGTTTTGCCTAGGTTCA 59.448 34.615 11.31 0.00 0.00 3.18
2896 3308 6.988522 TCCTTTAAATGTTTTGCCTAGGTTC 58.011 36.000 11.31 0.00 0.00 3.62
2897 3309 6.987403 TCCTTTAAATGTTTTGCCTAGGTT 57.013 33.333 11.31 0.00 0.00 3.50
2898 3310 6.014584 CCTTCCTTTAAATGTTTTGCCTAGGT 60.015 38.462 11.31 0.00 0.00 3.08
2899 3311 6.210584 TCCTTCCTTTAAATGTTTTGCCTAGG 59.789 38.462 3.67 3.67 0.00 3.02
2900 3312 7.227049 TCCTTCCTTTAAATGTTTTGCCTAG 57.773 36.000 0.00 0.00 0.00 3.02
2901 3313 7.604657 TTCCTTCCTTTAAATGTTTTGCCTA 57.395 32.000 0.00 0.00 0.00 3.93
2902 3314 6.493189 TTCCTTCCTTTAAATGTTTTGCCT 57.507 33.333 0.00 0.00 0.00 4.75
2903 3315 5.179368 GCTTCCTTCCTTTAAATGTTTTGCC 59.821 40.000 0.00 0.00 0.00 4.52
2904 3316 5.179368 GGCTTCCTTCCTTTAAATGTTTTGC 59.821 40.000 0.00 0.00 0.00 3.68
2905 3317 5.700832 GGGCTTCCTTCCTTTAAATGTTTTG 59.299 40.000 0.00 0.00 0.00 2.44
2906 3318 5.368230 TGGGCTTCCTTCCTTTAAATGTTTT 59.632 36.000 0.00 0.00 0.00 2.43
2907 3319 4.904853 TGGGCTTCCTTCCTTTAAATGTTT 59.095 37.500 0.00 0.00 0.00 2.83
2908 3320 4.283467 GTGGGCTTCCTTCCTTTAAATGTT 59.717 41.667 0.00 0.00 0.00 2.71
2909 3321 3.832490 GTGGGCTTCCTTCCTTTAAATGT 59.168 43.478 0.00 0.00 0.00 2.71
2910 3322 3.195610 GGTGGGCTTCCTTCCTTTAAATG 59.804 47.826 0.00 0.00 0.00 2.32
2911 3323 3.181412 TGGTGGGCTTCCTTCCTTTAAAT 60.181 43.478 0.00 0.00 0.00 1.40
2912 3324 2.178106 TGGTGGGCTTCCTTCCTTTAAA 59.822 45.455 0.00 0.00 0.00 1.52
2913 3325 1.783979 TGGTGGGCTTCCTTCCTTTAA 59.216 47.619 0.00 0.00 0.00 1.52
2914 3326 1.451449 TGGTGGGCTTCCTTCCTTTA 58.549 50.000 0.00 0.00 0.00 1.85
2915 3327 0.560688 TTGGTGGGCTTCCTTCCTTT 59.439 50.000 0.00 0.00 0.00 3.11
2916 3328 0.786435 ATTGGTGGGCTTCCTTCCTT 59.214 50.000 0.00 0.00 0.00 3.36
2917 3329 1.285078 GTATTGGTGGGCTTCCTTCCT 59.715 52.381 0.00 0.00 0.00 3.36
2918 3330 1.005450 TGTATTGGTGGGCTTCCTTCC 59.995 52.381 0.00 0.00 0.00 3.46
2919 3331 2.507407 TGTATTGGTGGGCTTCCTTC 57.493 50.000 0.00 0.00 0.00 3.46
2920 3332 2.311542 TCATGTATTGGTGGGCTTCCTT 59.688 45.455 0.00 0.00 0.00 3.36
2921 3333 1.922447 TCATGTATTGGTGGGCTTCCT 59.078 47.619 0.00 0.00 0.00 3.36
2922 3334 2.435372 TCATGTATTGGTGGGCTTCC 57.565 50.000 0.00 0.00 0.00 3.46
2923 3335 3.620488 TCTTCATGTATTGGTGGGCTTC 58.380 45.455 0.00 0.00 0.00 3.86
2924 3336 3.624777 CTCTTCATGTATTGGTGGGCTT 58.375 45.455 0.00 0.00 0.00 4.35
2925 3337 2.684927 GCTCTTCATGTATTGGTGGGCT 60.685 50.000 0.00 0.00 0.00 5.19
2926 3338 1.678101 GCTCTTCATGTATTGGTGGGC 59.322 52.381 0.00 0.00 0.00 5.36
2927 3339 3.287867 AGCTCTTCATGTATTGGTGGG 57.712 47.619 0.00 0.00 0.00 4.61
2928 3340 5.882557 ACTAAAGCTCTTCATGTATTGGTGG 59.117 40.000 0.00 0.00 0.00 4.61
2929 3341 6.992063 ACTAAAGCTCTTCATGTATTGGTG 57.008 37.500 0.00 0.00 0.00 4.17
2930 3342 6.127897 GCAACTAAAGCTCTTCATGTATTGGT 60.128 38.462 0.00 0.00 0.00 3.67
2931 3343 6.094603 AGCAACTAAAGCTCTTCATGTATTGG 59.905 38.462 0.00 0.00 38.01 3.16
2932 3344 7.081526 AGCAACTAAAGCTCTTCATGTATTG 57.918 36.000 0.00 0.00 38.01 1.90
2933 3345 8.792830 TTAGCAACTAAAGCTCTTCATGTATT 57.207 30.769 0.00 0.00 42.32 1.89
2934 3346 8.792830 TTTAGCAACTAAAGCTCTTCATGTAT 57.207 30.769 0.00 0.00 42.32 2.29
2935 3347 8.792830 ATTTAGCAACTAAAGCTCTTCATGTA 57.207 30.769 6.04 0.00 42.32 2.29
2936 3348 7.391554 TGATTTAGCAACTAAAGCTCTTCATGT 59.608 33.333 14.32 0.00 41.23 3.21
2937 3349 7.755591 TGATTTAGCAACTAAAGCTCTTCATG 58.244 34.615 14.32 0.00 41.23 3.07
2938 3350 7.928307 TGATTTAGCAACTAAAGCTCTTCAT 57.072 32.000 14.32 0.00 41.23 2.57
2939 3351 7.928307 ATGATTTAGCAACTAAAGCTCTTCA 57.072 32.000 14.32 8.95 41.23 3.02
2950 3362 9.362539 CTTGCTTGATTTAATGATTTAGCAACT 57.637 29.630 0.00 0.00 41.03 3.16
2951 3363 8.112449 GCTTGCTTGATTTAATGATTTAGCAAC 58.888 33.333 0.00 0.00 41.03 4.17
2952 3364 8.036575 AGCTTGCTTGATTTAATGATTTAGCAA 58.963 29.630 0.00 0.00 42.91 3.91
2953 3365 7.549839 AGCTTGCTTGATTTAATGATTTAGCA 58.450 30.769 0.00 0.00 35.77 3.49
2954 3366 7.998753 AGCTTGCTTGATTTAATGATTTAGC 57.001 32.000 0.00 0.00 0.00 3.09
2956 3368 9.520204 GCTAAGCTTGCTTGATTTAATGATTTA 57.480 29.630 17.04 0.00 0.00 1.40
2957 3369 8.036575 TGCTAAGCTTGCTTGATTTAATGATTT 58.963 29.630 17.04 0.00 0.00 2.17
2958 3370 7.549839 TGCTAAGCTTGCTTGATTTAATGATT 58.450 30.769 17.04 0.00 0.00 2.57
2959 3371 7.104043 TGCTAAGCTTGCTTGATTTAATGAT 57.896 32.000 17.04 0.00 0.00 2.45
2960 3372 6.513806 TGCTAAGCTTGCTTGATTTAATGA 57.486 33.333 17.04 0.00 0.00 2.57
2961 3373 6.035327 GGTTGCTAAGCTTGCTTGATTTAATG 59.965 38.462 17.04 0.48 0.00 1.90
2962 3374 6.101997 GGTTGCTAAGCTTGCTTGATTTAAT 58.898 36.000 17.04 0.00 0.00 1.40
2963 3375 5.010516 TGGTTGCTAAGCTTGCTTGATTTAA 59.989 36.000 17.04 3.91 0.00 1.52
2964 3376 4.522405 TGGTTGCTAAGCTTGCTTGATTTA 59.478 37.500 17.04 0.00 0.00 1.40
2965 3377 3.321682 TGGTTGCTAAGCTTGCTTGATTT 59.678 39.130 17.04 0.00 0.00 2.17
2966 3378 2.892852 TGGTTGCTAAGCTTGCTTGATT 59.107 40.909 17.04 0.00 0.00 2.57
2967 3379 2.517959 TGGTTGCTAAGCTTGCTTGAT 58.482 42.857 17.04 0.00 0.00 2.57
2968 3380 1.979855 TGGTTGCTAAGCTTGCTTGA 58.020 45.000 17.04 0.00 0.00 3.02
2969 3381 4.418392 CTTATGGTTGCTAAGCTTGCTTG 58.582 43.478 17.04 8.75 0.00 4.01
2970 3382 3.119352 GCTTATGGTTGCTAAGCTTGCTT 60.119 43.478 9.86 12.65 44.88 3.91
2971 3383 2.424956 GCTTATGGTTGCTAAGCTTGCT 59.575 45.455 9.86 0.00 44.88 3.91
2972 3384 2.802256 GCTTATGGTTGCTAAGCTTGC 58.198 47.619 9.86 11.34 44.88 4.01
2978 3390 3.945285 GGTGCTTAGCTTATGGTTGCTAA 59.055 43.478 5.60 7.14 45.78 3.09
2979 3391 3.199946 AGGTGCTTAGCTTATGGTTGCTA 59.800 43.478 5.60 0.00 40.35 3.49
2980 3392 2.025887 AGGTGCTTAGCTTATGGTTGCT 60.026 45.455 5.60 0.00 42.67 3.91
2981 3393 2.369394 AGGTGCTTAGCTTATGGTTGC 58.631 47.619 5.60 0.00 0.00 4.17
2982 3394 5.679734 CATAGGTGCTTAGCTTATGGTTG 57.320 43.478 5.60 0.00 0.00 3.77
2997 3409 3.795688 ATACTCCCCAATGCATAGGTG 57.204 47.619 13.23 11.31 0.00 4.00
2998 3410 4.503398 ACTATACTCCCCAATGCATAGGT 58.497 43.478 13.23 3.95 0.00 3.08
2999 3411 5.248640 CAACTATACTCCCCAATGCATAGG 58.751 45.833 0.00 3.90 0.00 2.57
3000 3412 4.697352 GCAACTATACTCCCCAATGCATAG 59.303 45.833 0.00 0.00 33.00 2.23
3001 3413 4.350816 AGCAACTATACTCCCCAATGCATA 59.649 41.667 0.00 0.00 35.11 3.14
3002 3414 3.139025 AGCAACTATACTCCCCAATGCAT 59.861 43.478 0.00 0.00 35.11 3.96
3003 3415 2.509548 AGCAACTATACTCCCCAATGCA 59.490 45.455 0.00 0.00 35.11 3.96
3004 3416 3.214696 AGCAACTATACTCCCCAATGC 57.785 47.619 0.00 0.00 0.00 3.56
3005 3417 4.757149 GCTTAGCAACTATACTCCCCAATG 59.243 45.833 0.00 0.00 0.00 2.82
3006 3418 4.660771 AGCTTAGCAACTATACTCCCCAAT 59.339 41.667 7.07 0.00 0.00 3.16
3007 3419 4.037927 AGCTTAGCAACTATACTCCCCAA 58.962 43.478 7.07 0.00 0.00 4.12
3008 3420 3.654273 AGCTTAGCAACTATACTCCCCA 58.346 45.455 7.07 0.00 0.00 4.96
3009 3421 6.361768 AATAGCTTAGCAACTATACTCCCC 57.638 41.667 7.07 0.00 0.00 4.81
3010 3422 9.945904 ATTAAATAGCTTAGCAACTATACTCCC 57.054 33.333 7.07 0.00 0.00 4.30
3014 3426 9.813080 GCACATTAAATAGCTTAGCAACTATAC 57.187 33.333 7.07 0.00 0.00 1.47
3015 3427 9.778741 AGCACATTAAATAGCTTAGCAACTATA 57.221 29.630 7.07 0.00 32.52 1.31
3016 3428 8.682936 AGCACATTAAATAGCTTAGCAACTAT 57.317 30.769 7.07 0.00 32.52 2.12
3017 3429 8.506168 AAGCACATTAAATAGCTTAGCAACTA 57.494 30.769 7.07 0.00 44.73 2.24
3018 3430 7.396540 AAGCACATTAAATAGCTTAGCAACT 57.603 32.000 7.07 0.00 44.73 3.16
3040 3452 3.462021 GGTGCTTAGATGAGGTGCTAAG 58.538 50.000 0.00 0.00 43.95 2.18
3041 3453 2.170607 GGGTGCTTAGATGAGGTGCTAA 59.829 50.000 0.00 0.00 0.00 3.09
3042 3454 1.762957 GGGTGCTTAGATGAGGTGCTA 59.237 52.381 0.00 0.00 0.00 3.49
3043 3455 0.543749 GGGTGCTTAGATGAGGTGCT 59.456 55.000 0.00 0.00 0.00 4.40
3044 3456 0.253044 TGGGTGCTTAGATGAGGTGC 59.747 55.000 0.00 0.00 0.00 5.01
3045 3457 2.569059 CATGGGTGCTTAGATGAGGTG 58.431 52.381 0.00 0.00 0.00 4.00
3071 3483 1.023513 CACCAGACTTAGGCTGCTGC 61.024 60.000 10.08 7.10 38.76 5.25
3072 3484 0.392193 CCACCAGACTTAGGCTGCTG 60.392 60.000 10.08 6.48 32.06 4.41
3073 3485 1.986413 CCACCAGACTTAGGCTGCT 59.014 57.895 10.08 0.00 32.06 4.24
3074 3486 1.746991 GCCACCAGACTTAGGCTGC 60.747 63.158 10.08 0.00 43.70 5.25
3075 3487 1.078143 GGCCACCAGACTTAGGCTG 60.078 63.158 8.37 8.37 46.23 4.85
3076 3488 1.229658 AGGCCACCAGACTTAGGCT 60.230 57.895 5.01 0.00 46.23 4.58
3077 3489 1.078143 CAGGCCACCAGACTTAGGC 60.078 63.158 5.01 0.00 46.28 3.93
3078 3490 1.604378 CCAGGCCACCAGACTTAGG 59.396 63.158 5.01 0.00 0.00 2.69
3079 3491 1.201429 ACCCAGGCCACCAGACTTAG 61.201 60.000 5.01 0.00 0.00 2.18
3080 3492 1.151899 ACCCAGGCCACCAGACTTA 60.152 57.895 5.01 0.00 0.00 2.24
3081 3493 2.450502 ACCCAGGCCACCAGACTT 60.451 61.111 5.01 0.00 0.00 3.01
3082 3494 3.252284 CACCCAGGCCACCAGACT 61.252 66.667 5.01 0.00 0.00 3.24
3083 3495 3.570212 ACACCCAGGCCACCAGAC 61.570 66.667 5.01 0.00 0.00 3.51
3139 3564 7.011763 TCTGCTCAATGTGATTATAACTGAAGC 59.988 37.037 0.00 0.00 0.00 3.86
3141 3566 7.280876 GGTCTGCTCAATGTGATTATAACTGAA 59.719 37.037 0.00 0.00 0.00 3.02
3184 3609 1.904852 GCTGTGTGATGACTGCGTGG 61.905 60.000 0.00 0.00 32.10 4.94
3188 3613 1.500844 GCAGCTGTGTGATGACTGC 59.499 57.895 16.64 0.00 45.95 4.40
3262 3687 1.513586 GTAGCTGAACGGGTCGTCG 60.514 63.158 0.00 0.00 39.99 5.12
3286 3711 3.112580 GAGAGCTTCTACGACTGATTGC 58.887 50.000 0.00 0.00 0.00 3.56
3295 3720 5.143660 CGATACAAGATGAGAGCTTCTACG 58.856 45.833 0.00 0.00 0.00 3.51
3311 3736 0.545787 AGGTCACCACCCCGATACAA 60.546 55.000 0.00 0.00 45.12 2.41
3312 3737 0.974010 GAGGTCACCACCCCGATACA 60.974 60.000 0.00 0.00 45.12 2.29
3316 3741 3.923645 AGGAGGTCACCACCCCGA 61.924 66.667 6.70 0.00 45.12 5.14
3318 3743 1.716028 AAACAGGAGGTCACCACCCC 61.716 60.000 6.70 0.00 45.12 4.95
3346 3771 7.556275 CCAGACCTTTAAGATGCAACCTAAATA 59.444 37.037 0.00 0.00 0.00 1.40
3414 3839 4.588278 GACCAACGCAATTCTAGCAATAC 58.412 43.478 0.00 0.00 0.00 1.89
3534 3960 8.031277 GGCACTCAAAGATCAGATAACAAAATT 58.969 33.333 0.00 0.00 0.00 1.82
3542 3968 4.471904 AACGGCACTCAAAGATCAGATA 57.528 40.909 0.00 0.00 0.00 1.98
3543 3969 3.340814 AACGGCACTCAAAGATCAGAT 57.659 42.857 0.00 0.00 0.00 2.90
3717 4143 8.082242 GGGAAACACATGCCTATATTTTATCAC 58.918 37.037 0.00 0.00 0.00 3.06
3722 4148 5.957774 ACTGGGAAACACATGCCTATATTTT 59.042 36.000 0.00 0.00 0.00 1.82
3900 4327 7.015487 TCAGAATGTGGAAAATGAACTTGGAAT 59.985 33.333 0.00 0.00 37.40 3.01
3912 4339 4.582656 ACCGAAACATCAGAATGTGGAAAA 59.417 37.500 1.68 0.00 45.48 2.29
3923 4350 3.495193 CATGAAGCAACCGAAACATCAG 58.505 45.455 0.00 0.00 0.00 2.90
3957 4384 7.556635 GGTATTTTGCTCCTAGAACCTGTTATT 59.443 37.037 0.00 0.00 0.00 1.40
4316 4769 7.781324 TGATTCCATGCTATGTACTATCTGA 57.219 36.000 0.00 0.00 0.00 3.27
4322 4775 5.221783 TGCAGATGATTCCATGCTATGTACT 60.222 40.000 0.00 0.00 32.09 2.73
4438 4924 5.311265 TGAACAAATGAGAGCTCACAGATT 58.689 37.500 18.78 13.15 43.11 2.40
4678 5440 5.125900 TGGCAAGTGATAACATGAATGGAAG 59.874 40.000 0.00 0.00 0.00 3.46
4692 5454 3.118592 GGAGCTACTAGTTGGCAAGTGAT 60.119 47.826 17.67 7.84 0.00 3.06
4783 5695 5.237236 ACTTATTTTTCTCCGAGGGAACA 57.763 39.130 0.00 0.00 0.00 3.18
4787 5699 4.575236 GCCTAACTTATTTTTCTCCGAGGG 59.425 45.833 0.00 0.00 0.00 4.30
4788 5700 5.294552 CAGCCTAACTTATTTTTCTCCGAGG 59.705 44.000 0.00 0.00 0.00 4.63
4789 5701 5.875359 ACAGCCTAACTTATTTTTCTCCGAG 59.125 40.000 0.00 0.00 0.00 4.63
4790 5702 5.801380 ACAGCCTAACTTATTTTTCTCCGA 58.199 37.500 0.00 0.00 0.00 4.55
4792 5704 6.071896 AGCAACAGCCTAACTTATTTTTCTCC 60.072 38.462 0.00 0.00 0.00 3.71
4793 5705 6.914259 AGCAACAGCCTAACTTATTTTTCTC 58.086 36.000 0.00 0.00 0.00 2.87
4794 5706 6.901081 AGCAACAGCCTAACTTATTTTTCT 57.099 33.333 0.00 0.00 0.00 2.52
4801 5717 7.061054 TCTAGATCTAGCAACAGCCTAACTTA 58.939 38.462 22.81 0.00 33.32 2.24
4803 5719 5.450453 TCTAGATCTAGCAACAGCCTAACT 58.550 41.667 22.81 0.00 33.32 2.24
4841 5757 5.345741 CGAAGTTTGTTAAGAAATGCCATGG 59.654 40.000 7.63 7.63 0.00 3.66
4865 5781 4.499183 CCTACATGACAAAGACAGGAGAC 58.501 47.826 0.00 0.00 0.00 3.36
4907 5823 4.547532 GATCGTCTGAACAGCCGTATATT 58.452 43.478 5.26 0.00 31.07 1.28
4909 5825 2.032290 CGATCGTCTGAACAGCCGTATA 60.032 50.000 7.03 0.00 31.07 1.47
4980 5896 6.717289 TGTACTGCCTTAATACATTTCCAGT 58.283 36.000 0.00 0.00 36.41 4.00
5077 5993 8.560374 GTCCCATGAGTTTTTATAGATGTTAGC 58.440 37.037 0.00 0.00 0.00 3.09
5096 6012 4.637483 AAAATATGAACAGCGTCCCATG 57.363 40.909 0.00 0.00 0.00 3.66
5102 6018 5.437060 ACTGGGATAAAATATGAACAGCGT 58.563 37.500 0.00 0.00 0.00 5.07
5110 6026 6.828273 TGGTGAGACAACTGGGATAAAATATG 59.172 38.462 0.00 0.00 0.00 1.78
5147 6063 7.445096 TCAACTCACATTTTAAGCATCAGAGAA 59.555 33.333 0.00 0.00 0.00 2.87
5187 6103 0.893270 CTTCACGGACATTTGGGGCA 60.893 55.000 0.00 0.00 0.00 5.36
5310 6226 3.574284 TGCGGATGAACATTTTCCAAG 57.426 42.857 0.00 0.00 0.00 3.61
5421 6337 3.926527 TGCTGAGTTGATTACACATCGAC 59.073 43.478 0.00 0.00 33.63 4.20
5552 6468 0.250727 TAAGGCTGTGACACTTGGCC 60.251 55.000 21.50 21.50 42.74 5.36
5553 6469 1.470098 CATAAGGCTGTGACACTTGGC 59.530 52.381 7.20 11.62 0.00 4.52
5649 6565 6.423182 AGTCAAGCAGGCCATAAGTTTATTA 58.577 36.000 5.01 0.00 0.00 0.98
5663 6579 6.790285 ATTTTTGCAAATTAGTCAAGCAGG 57.210 33.333 13.65 0.00 36.47 4.85
5725 6649 9.389570 CAAGTGTATCATAAACATGCATATGTG 57.610 33.333 14.57 0.00 46.54 3.21
5780 6706 6.338146 CAGTTGGATTCTAACCGAACTCATA 58.662 40.000 9.06 0.00 33.72 2.15
5782 6708 4.566004 CAGTTGGATTCTAACCGAACTCA 58.434 43.478 9.06 0.00 33.72 3.41
5843 7037 7.680730 ACTTCAATAAGTAACATCACCAGACT 58.319 34.615 0.00 0.00 44.26 3.24
5844 7038 7.907214 ACTTCAATAAGTAACATCACCAGAC 57.093 36.000 0.00 0.00 44.26 3.51
5847 7041 8.684386 TTGAACTTCAATAAGTAACATCACCA 57.316 30.769 0.00 0.00 45.37 4.17
5885 7080 4.932200 CACTAGGTGTCCTTGAAAGACATC 59.068 45.833 0.00 0.00 45.45 3.06
5888 7083 4.602340 TCACTAGGTGTCCTTGAAAGAC 57.398 45.455 4.48 0.00 34.61 3.01
5901 7096 5.989477 TGCATTGCTACTATTTCACTAGGT 58.011 37.500 10.49 0.00 0.00 3.08
5902 7097 6.051717 ACTGCATTGCTACTATTTCACTAGG 58.948 40.000 10.49 0.00 0.00 3.02
5916 7111 7.712205 AGATTTGAAAGTAAAAACTGCATTGCT 59.288 29.630 10.49 0.00 0.00 3.91
5923 7118 9.023967 CAGTGGAAGATTTGAAAGTAAAAACTG 57.976 33.333 0.00 0.00 0.00 3.16
5946 7141 0.623324 TAATGGCCCCCACTAGCAGT 60.623 55.000 0.00 0.00 35.80 4.40
5947 7142 0.773644 ATAATGGCCCCCACTAGCAG 59.226 55.000 0.00 0.00 35.80 4.24
5948 7143 1.231018 AATAATGGCCCCCACTAGCA 58.769 50.000 0.00 0.00 35.80 3.49
5949 7144 3.739401 ATAATAATGGCCCCCACTAGC 57.261 47.619 0.00 0.00 35.80 3.42
5950 7145 5.255397 TCAATAATAATGGCCCCCACTAG 57.745 43.478 0.00 0.00 35.80 2.57
5951 7146 5.135362 AGTTCAATAATAATGGCCCCCACTA 59.865 40.000 0.00 0.00 35.80 2.74
5952 7147 4.078630 AGTTCAATAATAATGGCCCCCACT 60.079 41.667 0.00 0.00 35.80 4.00
5953 7148 4.039124 CAGTTCAATAATAATGGCCCCCAC 59.961 45.833 0.00 0.00 35.80 4.61
5954 7149 4.222336 CAGTTCAATAATAATGGCCCCCA 58.778 43.478 0.00 0.00 38.19 4.96
5994 7189 0.332632 ATGCACCTTGCCCATAGTGT 59.667 50.000 0.00 0.00 44.23 3.55
6038 7234 6.380079 AGAATGGGAGTGAGTAAGAAACAT 57.620 37.500 0.00 0.00 0.00 2.71
6051 7247 4.985538 TGCAGACTAAAAAGAATGGGAGT 58.014 39.130 0.00 0.00 0.00 3.85
6065 7261 8.518430 TTCAGCCAAATTTTATATGCAGACTA 57.482 30.769 0.00 0.00 0.00 2.59
6085 7281 4.682787 ACTTTACAAAGTTTGGCTTCAGC 58.317 39.130 19.45 0.00 46.52 4.26
6133 7329 9.877137 GCACATTTCGTATTGTGAATATTCATA 57.123 29.630 20.65 15.57 44.74 2.15
6179 7375 4.200874 ACCTGGACGAACACATAAAAACA 58.799 39.130 0.00 0.00 0.00 2.83
6181 7377 6.568844 GCAATACCTGGACGAACACATAAAAA 60.569 38.462 0.00 0.00 0.00 1.94
6194 7390 1.818060 TGTTGCATGCAATACCTGGAC 59.182 47.619 33.94 20.30 38.28 4.02
6268 7464 7.966812 ACATGGTATTGCTTACTCTATGATGA 58.033 34.615 0.00 0.00 0.00 2.92
6269 7465 8.501580 CAACATGGTATTGCTTACTCTATGATG 58.498 37.037 0.00 0.00 0.00 3.07
6270 7466 8.213679 ACAACATGGTATTGCTTACTCTATGAT 58.786 33.333 0.00 0.00 0.00 2.45
6291 7487 5.981088 ATACAGCATTGAAATCCACAACA 57.019 34.783 0.00 0.00 0.00 3.33
6292 7488 6.851609 TGTATACAGCATTGAAATCCACAAC 58.148 36.000 0.08 0.00 0.00 3.32
6317 7514 7.332182 TGTGGGTTGAAAAATAACTGAACAAAC 59.668 33.333 0.00 0.00 0.00 2.93
6376 7573 3.181461 CCTCAGAGACAGGTCAAACACTT 60.181 47.826 0.00 0.00 0.00 3.16
6390 7587 8.580720 GCATACTAGAACAAATATCCTCAGAGA 58.419 37.037 0.00 0.00 0.00 3.10
6396 7593 8.612619 CAAAACGCATACTAGAACAAATATCCT 58.387 33.333 0.00 0.00 0.00 3.24
6403 7600 6.811253 AATCCAAAACGCATACTAGAACAA 57.189 33.333 0.00 0.00 0.00 2.83
6407 7604 7.553334 AGAGTAAATCCAAAACGCATACTAGA 58.447 34.615 0.00 0.00 0.00 2.43
6421 7618 8.208224 TCGAATATAAGCCAAAGAGTAAATCCA 58.792 33.333 0.00 0.00 0.00 3.41
6459 7656 2.526304 AGCAGCAAACGTTAGTCTCA 57.474 45.000 0.00 0.00 0.00 3.27
6475 7672 4.502962 CACCAAACCAAAAAGAAGAAGCA 58.497 39.130 0.00 0.00 0.00 3.91
6476 7673 3.309682 GCACCAAACCAAAAAGAAGAAGC 59.690 43.478 0.00 0.00 0.00 3.86
6477 7674 4.502962 TGCACCAAACCAAAAAGAAGAAG 58.497 39.130 0.00 0.00 0.00 2.85
6518 7715 9.225436 TCATGTACATTGCTGTGAGTTTATTAA 57.775 29.630 5.37 0.00 36.79 1.40
6732 7929 6.071334 TCGCTATATTCAGTTATCTTCCAGGG 60.071 42.308 0.00 0.00 0.00 4.45
6757 7954 3.927142 GCCGCGCTATATTCAGTTATCTT 59.073 43.478 5.56 0.00 0.00 2.40
6758 7955 3.193691 AGCCGCGCTATATTCAGTTATCT 59.806 43.478 5.56 0.00 36.99 1.98
6759 7956 3.512680 AGCCGCGCTATATTCAGTTATC 58.487 45.455 5.56 0.00 36.99 1.75
6760 7957 3.594603 AGCCGCGCTATATTCAGTTAT 57.405 42.857 5.56 0.00 36.99 1.89
6761 7958 3.380479 AAGCCGCGCTATATTCAGTTA 57.620 42.857 5.56 0.00 38.25 2.24
6762 7959 2.240493 AAGCCGCGCTATATTCAGTT 57.760 45.000 5.56 0.00 38.25 3.16
6763 7960 3.594603 ATAAGCCGCGCTATATTCAGT 57.405 42.857 5.56 0.00 38.25 3.41
6764 7961 6.206498 TGTATATAAGCCGCGCTATATTCAG 58.794 40.000 5.56 0.00 38.25 3.02
6765 7962 6.139048 TGTATATAAGCCGCGCTATATTCA 57.861 37.500 5.56 7.61 38.25 2.57
6766 7963 5.117287 GCTGTATATAAGCCGCGCTATATTC 59.883 44.000 5.56 5.11 38.25 1.75
6767 7964 4.982916 GCTGTATATAAGCCGCGCTATATT 59.017 41.667 5.56 0.00 38.25 1.28
6768 7965 4.037565 TGCTGTATATAAGCCGCGCTATAT 59.962 41.667 5.56 8.85 38.25 0.86
6769 7966 3.379057 TGCTGTATATAAGCCGCGCTATA 59.621 43.478 5.56 0.71 38.25 1.31
6770 7967 2.165641 TGCTGTATATAAGCCGCGCTAT 59.834 45.455 5.56 0.00 38.25 2.97
6771 7968 1.542472 TGCTGTATATAAGCCGCGCTA 59.458 47.619 5.56 0.00 38.25 4.26
6772 7969 0.317160 TGCTGTATATAAGCCGCGCT 59.683 50.000 5.56 0.00 42.56 5.92
6773 7970 1.144969 TTGCTGTATATAAGCCGCGC 58.855 50.000 0.00 0.00 40.06 6.86
6774 7971 3.493129 TCTTTTGCTGTATATAAGCCGCG 59.507 43.478 0.00 0.00 40.06 6.46
6775 7972 5.418310 TTCTTTTGCTGTATATAAGCCGC 57.582 39.130 11.79 0.00 40.06 6.53
6802 7999 1.327764 GTGCGTCGGGATTCATCTTTC 59.672 52.381 0.00 0.00 0.00 2.62
6835 8032 6.321181 AGGCAGAGAAAACAGAAAACATACAA 59.679 34.615 0.00 0.00 0.00 2.41
6837 8034 6.205658 AGAGGCAGAGAAAACAGAAAACATAC 59.794 38.462 0.00 0.00 0.00 2.39
7023 8620 3.185797 GGCGTCACGAAAAGAAAGTATGT 59.814 43.478 0.00 0.00 0.00 2.29
7074 8671 3.275617 ACGCCATGTCCTGCTTATTTA 57.724 42.857 0.00 0.00 0.00 1.40
7119 8753 5.699839 ACAAAATGAACTTCGTGGCTATTC 58.300 37.500 0.00 0.00 0.00 1.75
7129 8763 4.518970 TCAGGGCTGTACAAAATGAACTTC 59.481 41.667 0.00 0.00 0.00 3.01
7134 8768 3.788227 ACTCAGGGCTGTACAAAATGA 57.212 42.857 0.00 0.00 0.00 2.57
7152 8786 5.763204 ACGATGGTAGAAAAATGTGACAACT 59.237 36.000 0.00 0.00 0.00 3.16
7158 8792 5.621197 TGGAACGATGGTAGAAAAATGTG 57.379 39.130 0.00 0.00 0.00 3.21
7161 8795 4.644685 CCCATGGAACGATGGTAGAAAAAT 59.355 41.667 15.22 0.00 41.38 1.82
7260 8905 0.725784 CTTGCACCAATCAACGACGC 60.726 55.000 0.00 0.00 0.00 5.19
7344 8989 8.023021 AGCTTGATGTGGTAGTATATCTTCAA 57.977 34.615 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.