Multiple sequence alignment - TraesCS6A01G284400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G284400 chr6A 100.000 8537 0 0 1 8537 515676421 515667885 0.000000e+00 15765.0
1 TraesCS6A01G284400 chr6A 83.075 709 95 17 3150 3840 516160708 516160007 9.410000e-174 621.0
2 TraesCS6A01G284400 chr6A 85.800 500 48 14 7356 7836 515652991 515652496 7.650000e-140 508.0
3 TraesCS6A01G284400 chr6A 83.745 486 64 8 7356 7836 515647504 515647029 6.080000e-121 446.0
4 TraesCS6A01G284400 chr6A 84.304 395 51 5 6228 6621 515670061 515669677 8.090000e-100 375.0
5 TraesCS6A01G284400 chr6A 84.304 395 51 5 6361 6745 515670194 515669801 8.090000e-100 375.0
6 TraesCS6A01G284400 chr6A 85.873 361 41 6 4375 4728 516159852 516159495 8.090000e-100 375.0
7 TraesCS6A01G284400 chr6B 93.147 4363 188 44 10 4293 561155151 561150821 0.000000e+00 6298.0
8 TraesCS6A01G284400 chr6B 94.355 2905 121 12 5162 8045 561149819 561146937 0.000000e+00 4416.0
9 TraesCS6A01G284400 chr6B 91.569 854 31 12 4350 5163 561150833 561149981 0.000000e+00 1140.0
10 TraesCS6A01G284400 chr6B 83.006 712 95 21 3150 3847 561275014 561274315 9.410000e-174 621.0
11 TraesCS6A01G284400 chr6B 86.809 470 48 11 7355 7814 561010595 561011060 5.910000e-141 512.0
12 TraesCS6A01G284400 chr6B 80.635 630 91 19 2058 2674 561275653 561275042 7.810000e-125 459.0
13 TraesCS6A01G284400 chr6B 86.111 396 50 4 6228 6621 561148634 561148242 1.020000e-113 422.0
14 TraesCS6A01G284400 chr6B 85.063 395 44 7 6361 6745 561148764 561148375 1.040000e-103 388.0
15 TraesCS6A01G284400 chr6B 86.040 351 41 6 4375 4719 561274167 561273819 3.760000e-98 370.0
16 TraesCS6A01G284400 chr6B 88.077 260 26 4 6232 6489 561148497 561148241 3.870000e-78 303.0
17 TraesCS6A01G284400 chr6B 85.115 262 25 7 6495 6746 561148763 561148506 1.100000e-63 255.0
18 TraesCS6A01G284400 chr6B 82.414 290 34 9 7555 7836 561038553 561038833 3.980000e-58 237.0
19 TraesCS6A01G284400 chr6B 83.893 149 15 5 7379 7521 561038403 561038548 5.380000e-27 134.0
20 TraesCS6A01G284400 chr6D 94.278 3600 102 23 1531 5057 373425921 373422353 0.000000e+00 5411.0
21 TraesCS6A01G284400 chr6D 96.762 2409 57 7 5418 7811 373421877 373419475 0.000000e+00 3997.0
22 TraesCS6A01G284400 chr6D 91.091 1953 106 26 10 1909 373427642 373425705 0.000000e+00 2580.0
23 TraesCS6A01G284400 chr6D 94.952 416 19 2 5000 5413 373422378 373421963 0.000000e+00 651.0
24 TraesCS6A01G284400 chr6D 82.749 713 95 23 3150 3847 374108161 374107462 2.040000e-170 610.0
25 TraesCS6A01G284400 chr6D 81.818 638 95 12 6877 7501 374106529 374105900 4.570000e-142 516.0
26 TraesCS6A01G284400 chr6D 84.742 485 59 12 7356 7836 373407801 373407328 1.000000e-128 472.0
27 TraesCS6A01G284400 chr6D 80.349 631 90 20 2058 2674 374108799 374108189 1.690000e-121 448.0
28 TraesCS6A01G284400 chr6D 86.076 395 54 1 6228 6621 373420935 373420541 2.850000e-114 424.0
29 TraesCS6A01G284400 chr6D 86.269 386 35 9 8165 8535 449665649 449666031 3.710000e-108 403.0
30 TraesCS6A01G284400 chr6D 85.464 399 42 7 6361 6745 373421071 373420675 1.330000e-107 401.0
31 TraesCS6A01G284400 chr6D 86.895 351 38 6 4375 4719 374107314 374106966 3.740000e-103 387.0
32 TraesCS6A01G284400 chr6D 81.316 380 36 8 7822 8171 373419408 373419034 8.440000e-70 276.0
33 TraesCS6A01G284400 chr6D 86.038 265 23 7 6495 6746 373421070 373420807 1.090000e-68 272.0
34 TraesCS6A01G284400 chr6D 95.918 49 2 0 7777 7825 373419478 373419430 7.100000e-11 80.5
35 TraesCS6A01G284400 chr2A 87.968 374 33 9 8171 8535 15280903 15281273 1.700000e-116 431.0
36 TraesCS6A01G284400 chr7D 87.139 381 30 13 8171 8535 126465658 126465281 1.710000e-111 414.0
37 TraesCS6A01G284400 chr7D 80.435 368 50 18 3470 3832 184099054 184099404 2.360000e-65 261.0
38 TraesCS6A01G284400 chr5A 86.945 383 31 10 8168 8535 438144803 438145181 6.170000e-111 412.0
39 TraesCS6A01G284400 chr5A 83.648 318 44 7 8171 8486 323764849 323765160 8.380000e-75 292.0
40 TraesCS6A01G284400 chr1D 86.126 382 33 10 8171 8536 419639419 419639042 2.230000e-105 394.0
41 TraesCS6A01G284400 chr1D 85.000 380 37 12 8171 8535 360438276 360437902 1.350000e-97 368.0
42 TraesCS6A01G284400 chr4A 85.567 388 36 13 8164 8535 483366817 483367200 1.040000e-103 388.0
43 TraesCS6A01G284400 chr4D 85.789 380 36 12 8171 8535 20769633 20769257 3.740000e-103 387.0
44 TraesCS6A01G284400 chr4D 84.000 350 36 14 8171 8505 186491083 186490739 1.380000e-82 318.0
45 TraesCS6A01G284400 chr3D 84.715 386 38 11 8171 8535 75115915 75115530 4.870000e-97 366.0
46 TraesCS6A01G284400 chr5B 83.784 370 43 13 8171 8535 575606824 575606467 1.370000e-87 335.0
47 TraesCS6A01G284400 chr7B 80.214 374 47 22 3463 3832 153325995 153326345 1.100000e-63 255.0
48 TraesCS6A01G284400 chr7A 79.891 368 52 18 3470 3832 186641565 186641215 5.120000e-62 250.0
49 TraesCS6A01G284400 chr7A 89.937 159 15 1 8380 8537 25892502 25892660 4.040000e-48 204.0
50 TraesCS6A01G284400 chr5D 82.463 268 26 11 8283 8534 415745542 415745804 1.870000e-51 215.0
51 TraesCS6A01G284400 chr3B 81.685 273 32 9 8277 8535 637454390 637454122 2.410000e-50 211.0
52 TraesCS6A01G284400 chr3B 100.000 30 0 0 6301 6330 740710422 740710393 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G284400 chr6A 515667885 515676421 8536 True 15765.000000 15765 100.000000 1 8537 1 chr6A.!!$R3 8536
1 TraesCS6A01G284400 chr6A 516159495 516160708 1213 True 498.000000 621 84.474000 3150 4728 2 chr6A.!!$R5 1578
2 TraesCS6A01G284400 chr6A 515669677 515670194 517 True 375.000000 375 84.304000 6228 6745 2 chr6A.!!$R4 517
3 TraesCS6A01G284400 chr6B 561146937 561155151 8214 True 1888.857143 6298 89.062429 10 8045 7 chr6B.!!$R1 8035
4 TraesCS6A01G284400 chr6B 561273819 561275653 1834 True 483.333333 621 83.227000 2058 4719 3 chr6B.!!$R2 2661
5 TraesCS6A01G284400 chr6D 373419034 373427642 8608 True 1565.833333 5411 90.210556 10 8171 9 chr6D.!!$R2 8161
6 TraesCS6A01G284400 chr6D 374105900 374108799 2899 True 490.250000 610 82.952750 2058 7501 4 chr6D.!!$R3 5443

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
808 849 0.106918 TGGAAGTTTTGGTCCGCTGT 60.107 50.000 0.0 0.0 36.65 4.40 F
1172 1215 0.030504 TGCTGATGTTGTTGTTGCCG 59.969 50.000 0.0 0.0 0.00 5.69 F
1175 1218 1.065401 CTGATGTTGTTGTTGCCGTGT 59.935 47.619 0.0 0.0 0.00 4.49 F
2372 2612 1.135286 GCGGATGCAAGAAAAGGGAAG 60.135 52.381 0.0 0.0 42.15 3.46 F
2680 2929 1.841302 TTCATTCTGCCTCGCCACCT 61.841 55.000 0.0 0.0 0.00 4.00 F
4063 4367 1.915266 CCTGAGTGGCTGGGACTGA 60.915 63.158 0.0 0.0 32.31 3.41 F
5590 6271 1.532437 CATGCGCACAGAGAACTCAAA 59.468 47.619 14.9 0.0 0.00 2.69 F
5969 6661 0.171903 CCAATCGCTTGCTTCCCTTG 59.828 55.000 0.0 0.0 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1868 2102 0.109532 TTGTCGCTTTGGTCATCCCA 59.890 50.000 0.00 0.0 43.27 4.37 R
2680 2929 1.522806 GTGTGTGCGTGTTGGGAGA 60.523 57.895 0.00 0.0 0.00 3.71 R
3136 3386 3.581024 TTCATCATGCAAGCAACTTCC 57.419 42.857 0.00 0.0 0.00 3.46 R
3916 4194 2.566833 AGGTGAGCATGCAGTAAACA 57.433 45.000 21.98 7.0 0.00 2.83 R
4515 4837 3.181497 GCATGAACACACACTCAACAAGT 60.181 43.478 0.00 0.0 39.44 3.16 R
5610 6302 0.331278 GGGGATTGTGGGTGTCATGA 59.669 55.000 0.00 0.0 0.00 3.07 R
7512 8242 0.953471 GCAGCGTGTCATGGTACCAA 60.953 55.000 20.76 0.0 0.00 3.67 R
7789 8552 0.317938 GTTCACAGCGTCACTCGACT 60.318 55.000 0.00 0.0 42.86 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.305201 TTCCGGCTGAAAAGACACAC 58.695 50.000 0.00 0.00 0.00 3.82
47 49 1.078143 CCTAGTCCCTGCTGCAACC 60.078 63.158 3.02 0.00 0.00 3.77
78 80 4.436998 GGTGCGTCAGTCCCTCCG 62.437 72.222 0.00 0.00 0.00 4.63
84 86 1.171308 CGTCAGTCCCTCCGAGTTAA 58.829 55.000 0.00 0.00 0.00 2.01
85 87 1.542915 CGTCAGTCCCTCCGAGTTAAA 59.457 52.381 0.00 0.00 0.00 1.52
106 108 1.852067 GCCGACGTGACCAAAATGCT 61.852 55.000 0.00 0.00 0.00 3.79
387 416 2.668185 TTTCTTCCCGCTGTCCGCAA 62.668 55.000 0.00 0.00 39.08 4.85
403 432 0.891373 GCAAGGGAGAGAAAAAGGGC 59.109 55.000 0.00 0.00 0.00 5.19
588 627 2.754472 GCTCTGTTTTGGCGGATTTTT 58.246 42.857 0.00 0.00 0.00 1.94
591 630 2.036604 TCTGTTTTGGCGGATTTTTCCC 59.963 45.455 0.00 0.00 0.00 3.97
647 686 2.889521 TTAGGGGCAGATCTGGGCGA 62.890 60.000 23.89 4.23 0.00 5.54
728 767 4.398598 GCGCGTGCCCGATTTGTT 62.399 61.111 10.56 0.00 35.63 2.83
729 768 2.501650 CGCGTGCCCGATTTGTTG 60.502 61.111 0.00 0.00 35.63 3.33
798 839 0.476771 TTCGCCCTCCTGGAAGTTTT 59.523 50.000 0.00 0.00 35.39 2.43
799 840 0.250727 TCGCCCTCCTGGAAGTTTTG 60.251 55.000 0.00 0.00 35.39 2.44
808 849 0.106918 TGGAAGTTTTGGTCCGCTGT 60.107 50.000 0.00 0.00 36.65 4.40
816 857 4.522789 AGTTTTGGTCCGCTGTTAATCATT 59.477 37.500 0.00 0.00 0.00 2.57
820 861 3.689161 TGGTCCGCTGTTAATCATTCAAG 59.311 43.478 0.00 0.00 0.00 3.02
877 918 2.543777 TATGCCTGCGAATTCTACCC 57.456 50.000 3.52 0.00 0.00 3.69
905 947 1.463444 ACTTCGTTCCATTTACTGCGC 59.537 47.619 0.00 0.00 0.00 6.09
928 970 5.554636 CATTTTCTCGTCATGTCTGCTTAC 58.445 41.667 0.00 0.00 0.00 2.34
939 981 6.543831 GTCATGTCTGCTTACAATTATTCCCT 59.456 38.462 0.00 0.00 32.02 4.20
965 1007 1.237285 CCAGAAACCAGAACGGGCAG 61.237 60.000 0.00 0.00 40.22 4.85
983 1025 2.467838 CAGACATATGTGACGCTGGAG 58.532 52.381 14.43 0.00 0.00 3.86
1037 1080 2.948315 GGAAGGCTTCTAGATTTGCAGG 59.052 50.000 25.25 0.00 0.00 4.85
1076 1119 2.421424 GCAACTGCTCTTACCATTCTGG 59.579 50.000 0.00 0.00 39.97 3.86
1079 1122 2.093235 ACTGCTCTTACCATTCTGGCTC 60.093 50.000 0.00 0.00 42.67 4.70
1115 1158 1.281353 CGCGCTTGGTTGTTTGCTA 59.719 52.632 5.56 0.00 0.00 3.49
1135 1178 3.988379 ACATGTGCAATTCGTTTCAGT 57.012 38.095 0.00 0.00 0.00 3.41
1139 1182 3.202097 TGTGCAATTCGTTTCAGTGAGA 58.798 40.909 0.00 0.00 0.00 3.27
1140 1183 3.002246 TGTGCAATTCGTTTCAGTGAGAC 59.998 43.478 3.71 3.71 0.00 3.36
1170 1213 1.860326 GGTTGCTGATGTTGTTGTTGC 59.140 47.619 0.00 0.00 0.00 4.17
1172 1215 0.030504 TGCTGATGTTGTTGTTGCCG 59.969 50.000 0.00 0.00 0.00 5.69
1174 1217 1.757574 CTGATGTTGTTGTTGCCGTG 58.242 50.000 0.00 0.00 0.00 4.94
1175 1218 1.065401 CTGATGTTGTTGTTGCCGTGT 59.935 47.619 0.00 0.00 0.00 4.49
1198 1241 1.742308 TTACAGGTCAGGGAGGCTTT 58.258 50.000 0.00 0.00 0.00 3.51
1411 1454 4.157472 TGTGATCGCTGCAATTGGAATTAA 59.843 37.500 7.72 0.00 0.00 1.40
1420 1463 5.636837 TGCAATTGGAATTAAGTCTTACGC 58.363 37.500 7.72 1.23 0.00 4.42
1450 1493 4.787598 CAGGTCTTGCTGTGTTATCAAAC 58.212 43.478 0.00 0.00 36.07 2.93
1482 1548 4.918583 GCTTACGTAGTCCTCATGCTATTC 59.081 45.833 0.00 0.00 43.93 1.75
1506 1572 9.481340 TTCGTCGTATACTAGATAGTAACATGT 57.519 33.333 0.00 0.00 41.64 3.21
1507 1573 8.919661 TCGTCGTATACTAGATAGTAACATGTG 58.080 37.037 0.00 0.00 41.64 3.21
1512 1578 9.976511 GTATACTAGATAGTAACATGTGGCAAA 57.023 33.333 0.00 0.00 41.64 3.68
1560 1631 7.689299 TCTTATCTGGAGAGGAATGAACAAAA 58.311 34.615 0.00 0.00 0.00 2.44
1561 1632 7.607991 TCTTATCTGGAGAGGAATGAACAAAAC 59.392 37.037 0.00 0.00 0.00 2.43
1562 1633 4.065088 TCTGGAGAGGAATGAACAAAACG 58.935 43.478 0.00 0.00 0.00 3.60
1564 1635 3.813166 TGGAGAGGAATGAACAAAACGAC 59.187 43.478 0.00 0.00 0.00 4.34
1590 1662 2.637382 TCTCATGCTTGGGAGTGTTACA 59.363 45.455 0.00 0.00 32.93 2.41
1596 1668 5.748670 TGCTTGGGAGTGTTACATAGTAA 57.251 39.130 0.00 0.00 0.00 2.24
1633 1866 8.145122 TGTCGTATGCTACATATTAACATGGAA 58.855 33.333 0.00 0.00 0.00 3.53
1726 1959 2.649312 AGGGGGATGAACAGAATGACAA 59.351 45.455 0.00 0.00 39.69 3.18
1745 1978 1.183676 ACGGTCTTACGCTTGGGAGT 61.184 55.000 0.00 0.00 37.37 3.85
1808 2041 1.420514 CATGGAGCAGACCTGGATCAT 59.579 52.381 0.00 0.00 0.00 2.45
1820 2053 7.308229 GCAGACCTGGATCATTTATATGAACAC 60.308 40.741 0.00 0.00 43.67 3.32
1849 2083 8.428186 AATGATTTGATTGTGGCATTGATTAC 57.572 30.769 0.00 0.00 0.00 1.89
1888 2122 1.463674 GGGATGACCAAAGCGACAAT 58.536 50.000 0.00 0.00 39.85 2.71
1896 2130 1.197721 CCAAAGCGACAATGGTCTCAC 59.802 52.381 0.00 0.00 42.05 3.51
1906 2140 1.194781 ATGGTCTCACGCTTGGGAGT 61.195 55.000 0.00 0.00 30.59 3.85
1992 2226 3.436704 CACATGTCTTGTAGCGTCCATTT 59.563 43.478 0.00 0.00 36.57 2.32
1993 2227 3.436704 ACATGTCTTGTAGCGTCCATTTG 59.563 43.478 0.00 0.00 36.57 2.32
2012 2246 7.065324 TCCATTTGCCTACTCTTTTTATGTACG 59.935 37.037 0.00 0.00 0.00 3.67
2073 2307 3.467374 TCGACTTGCCATGCATATGTA 57.533 42.857 0.00 0.00 38.76 2.29
2124 2361 5.636123 TGGCTTCCATTTCTAAACCACTAA 58.364 37.500 0.00 0.00 0.00 2.24
2304 2541 3.338249 TGCTGCAGTTCTCTAAATGGTC 58.662 45.455 16.64 0.00 31.39 4.02
2315 2552 5.479306 TCTCTAAATGGTCGTTCTTCCTTG 58.521 41.667 0.00 0.00 0.00 3.61
2372 2612 1.135286 GCGGATGCAAGAAAAGGGAAG 60.135 52.381 0.00 0.00 42.15 3.46
2680 2929 1.841302 TTCATTCTGCCTCGCCACCT 61.841 55.000 0.00 0.00 0.00 4.00
2691 2940 2.358737 GCCACCTCTCCCAACACG 60.359 66.667 0.00 0.00 0.00 4.49
2714 2963 5.500771 CGCACACACATCACACAGTATATTC 60.501 44.000 0.00 0.00 0.00 1.75
2738 2987 6.604396 TCTGTTGCCAAATAATCATCAGATGT 59.396 34.615 10.34 0.00 33.89 3.06
2744 2993 7.868922 TGCCAAATAATCATCAGATGTAATTGC 59.131 33.333 10.34 9.26 33.90 3.56
2842 3092 9.428097 CAATCTATTCATATGTGCTAAGCTACA 57.572 33.333 1.90 0.00 0.00 2.74
2848 3098 8.593492 TTCATATGTGCTAAGCTACACTATTG 57.407 34.615 13.63 9.08 37.68 1.90
3136 3386 7.547285 CATGAAATGCTTGCTTGAAAATTTG 57.453 32.000 0.00 0.00 37.62 2.32
3416 3671 9.154847 CTTAATTGATGTTTTTCCCATTCCTTC 57.845 33.333 0.00 0.00 0.00 3.46
3473 3728 3.929094 ACAATTGACATGATTTGTGCCC 58.071 40.909 13.59 0.00 39.18 5.36
4063 4367 1.915266 CCTGAGTGGCTGGGACTGA 60.915 63.158 0.00 0.00 32.31 3.41
4093 4397 9.958180 TCAAAAGAGACTGATATTGTTGGATTA 57.042 29.630 0.00 0.00 0.00 1.75
4515 4837 3.327172 TGTCCCCGTTATTAGGTTGTGAA 59.673 43.478 0.00 0.00 0.00 3.18
4556 4878 5.473504 TCATGCTAGTTCTTGTTTTCCTTCC 59.526 40.000 0.00 0.00 0.00 3.46
4678 5001 5.475564 TGGCCAGTAAATGTAAGTTCCTTTC 59.524 40.000 0.00 0.00 0.00 2.62
4762 5091 5.131784 TGCATATGGTTATGATCTTGTGCA 58.868 37.500 4.56 4.38 37.94 4.57
4941 5321 5.755375 TGATGTTCTGTCTTCTGTTCTGTTC 59.245 40.000 0.00 0.00 0.00 3.18
4943 5323 5.111989 TGTTCTGTCTTCTGTTCTGTTCTG 58.888 41.667 0.00 0.00 0.00 3.02
5039 5474 3.569903 GGCCATCTCCCCCTCTATATCTT 60.570 52.174 0.00 0.00 0.00 2.40
5065 5500 3.290710 TGGCTGGCCATCTAAAAAGATC 58.709 45.455 5.51 0.00 41.89 2.75
5066 5501 2.291741 GGCTGGCCATCTAAAAAGATCG 59.708 50.000 5.51 0.00 35.81 3.69
5143 5579 8.532186 ACTCTCTCTCATGTATGTCAGTAATT 57.468 34.615 0.00 0.00 0.00 1.40
5148 5584 8.971073 TCTCTCATGTATGTCAGTAATTTCTCA 58.029 33.333 0.00 0.00 0.00 3.27
5283 5882 6.297694 AGTGTATAGATTTCCGTACGTCTC 57.702 41.667 15.21 5.13 0.00 3.36
5291 5890 2.235845 TCCGTACGTCTCATCGATCT 57.764 50.000 15.21 0.00 34.70 2.75
5461 6142 7.587629 CATTCACGAATCAACCATTATAGCAT 58.412 34.615 0.00 0.00 0.00 3.79
5590 6271 1.532437 CATGCGCACAGAGAACTCAAA 59.468 47.619 14.90 0.00 0.00 2.69
5602 6294 5.757320 CAGAGAACTCAAACACACATCTCTT 59.243 40.000 4.64 0.00 39.95 2.85
5603 6295 5.757320 AGAGAACTCAAACACACATCTCTTG 59.243 40.000 4.64 0.00 39.15 3.02
5604 6296 4.274459 AGAACTCAAACACACATCTCTTGC 59.726 41.667 0.00 0.00 0.00 4.01
5605 6297 3.544684 ACTCAAACACACATCTCTTGCA 58.455 40.909 0.00 0.00 0.00 4.08
5606 6298 4.139786 ACTCAAACACACATCTCTTGCAT 58.860 39.130 0.00 0.00 0.00 3.96
5607 6299 4.214971 ACTCAAACACACATCTCTTGCATC 59.785 41.667 0.00 0.00 0.00 3.91
5608 6300 4.392047 TCAAACACACATCTCTTGCATCT 58.608 39.130 0.00 0.00 0.00 2.90
5609 6301 4.453478 TCAAACACACATCTCTTGCATCTC 59.547 41.667 0.00 0.00 0.00 2.75
5610 6302 3.977134 ACACACATCTCTTGCATCTCT 57.023 42.857 0.00 0.00 0.00 3.10
5691 6383 3.278574 CATCTCCGCCTACCAAATTCAA 58.721 45.455 0.00 0.00 0.00 2.69
5725 6417 1.250154 GCCATTAACACAGCAGGCCA 61.250 55.000 5.01 0.00 36.17 5.36
5768 6460 2.504519 GATGTACCCCACCCGAGC 59.495 66.667 0.00 0.00 0.00 5.03
5837 6529 1.888512 GTCATCCACCACAAGCAACAT 59.111 47.619 0.00 0.00 0.00 2.71
5872 6564 2.200370 ATATCCTCCCGTCGGCCA 59.800 61.111 5.50 0.00 0.00 5.36
5920 6612 1.283029 CATCCACCAACTCCTGTCCAT 59.717 52.381 0.00 0.00 0.00 3.41
5969 6661 0.171903 CCAATCGCTTGCTTCCCTTG 59.828 55.000 0.00 0.00 0.00 3.61
5977 6669 2.282745 GCTTCCCTTGCTGCCTGT 60.283 61.111 0.00 0.00 0.00 4.00
6141 6833 0.817634 TGGTGGTTGAGCTCCAAACG 60.818 55.000 12.15 0.00 45.34 3.60
6153 6845 2.359975 CAAACGGGGACAGAGGGC 60.360 66.667 0.00 0.00 0.00 5.19
6154 6846 3.647771 AAACGGGGACAGAGGGCC 61.648 66.667 0.00 0.00 0.00 5.80
6756 7461 1.340088 ATCTTGCACATGCCAACCAA 58.660 45.000 0.49 0.00 41.18 3.67
6859 7566 8.847196 ACCATGTATACGCTCGTTATATATCAT 58.153 33.333 0.00 0.00 0.00 2.45
7161 7891 4.543590 AGGTCATCACGACTTCTCATTT 57.456 40.909 0.00 0.00 44.70 2.32
7233 7963 1.135094 AGACATGCCGAATCTGGGAT 58.865 50.000 0.00 0.00 41.25 3.85
7425 8155 2.175202 GGCGAGATATCTGGGATGTCT 58.825 52.381 10.74 6.52 0.00 3.41
7512 8242 4.394920 CAGTTTGGGCGTCTGTATAACAAT 59.605 41.667 0.00 0.00 0.00 2.71
7525 8255 7.551262 GTCTGTATAACAATTGGTACCATGACA 59.449 37.037 20.06 12.94 0.00 3.58
7540 8270 1.963338 GACACGCTGCTTTGAGGCT 60.963 57.895 0.00 0.00 0.00 4.58
7780 8543 5.249852 AGGTTCCAGTTAGTTGTAAGGCATA 59.750 40.000 0.00 0.00 0.00 3.14
7789 8552 8.100791 AGTTAGTTGTAAGGCATATTGACTCAA 58.899 33.333 0.00 0.00 31.94 3.02
7825 8588 3.367932 GTGAACATTGTCGTCGATGATGT 59.632 43.478 11.16 16.20 38.46 3.06
7858 8647 2.810650 GATGAACGACATCCGCTTACT 58.189 47.619 13.33 0.00 46.78 2.24
7873 8662 2.480419 GCTTACTTGCGTCATGTTCTGT 59.520 45.455 0.00 0.00 0.00 3.41
7890 8679 9.973246 CATGTTCTGTCTGTTAATTGTATGTAC 57.027 33.333 0.00 0.00 0.00 2.90
7894 8683 9.772973 TTCTGTCTGTTAATTGTATGTACTTGT 57.227 29.630 0.00 0.00 0.00 3.16
7899 8688 9.772973 TCTGTTAATTGTATGTACTTGTCTTGT 57.227 29.630 0.00 0.00 0.00 3.16
7917 8706 4.040339 TCTTGTTGGTCAGAATCTGTGCTA 59.960 41.667 10.36 0.27 32.61 3.49
7934 8732 1.207791 CTATGGTGGAGGCTCCTGTT 58.792 55.000 32.28 17.32 37.46 3.16
8061 8878 1.668751 TGTGCGAGGTTTGTGTTTCTC 59.331 47.619 0.00 0.00 0.00 2.87
8067 8884 3.718815 GAGGTTTGTGTTTCTCGACTCT 58.281 45.455 0.00 0.00 0.00 3.24
8070 8887 5.471257 AGGTTTGTGTTTCTCGACTCTATC 58.529 41.667 0.00 0.00 0.00 2.08
8077 8894 6.208007 TGTGTTTCTCGACTCTATCTGGTTAA 59.792 38.462 0.00 0.00 0.00 2.01
8078 8895 7.093902 TGTGTTTCTCGACTCTATCTGGTTAAT 60.094 37.037 0.00 0.00 0.00 1.40
8080 8897 8.963725 TGTTTCTCGACTCTATCTGGTTAATTA 58.036 33.333 0.00 0.00 0.00 1.40
8081 8898 9.453325 GTTTCTCGACTCTATCTGGTTAATTAG 57.547 37.037 0.00 0.00 0.00 1.73
8082 8899 8.975663 TTCTCGACTCTATCTGGTTAATTAGA 57.024 34.615 0.00 0.00 0.00 2.10
8083 8900 9.575868 TTCTCGACTCTATCTGGTTAATTAGAT 57.424 33.333 8.78 8.78 37.42 1.98
8117 8934 7.281098 TCTCTAGGATCTCTAGCGTTTTCTTA 58.719 38.462 11.39 0.00 43.93 2.10
8118 8935 7.774157 TCTCTAGGATCTCTAGCGTTTTCTTAA 59.226 37.037 11.39 0.00 43.93 1.85
8119 8936 7.932335 TCTAGGATCTCTAGCGTTTTCTTAAG 58.068 38.462 11.39 0.00 43.93 1.85
8120 8937 6.777213 AGGATCTCTAGCGTTTTCTTAAGA 57.223 37.500 0.00 0.00 0.00 2.10
8127 8944 1.135660 GCGTTTTCTTAAGAGGGCAGC 60.136 52.381 5.12 5.88 0.00 5.25
8129 8946 1.468914 GTTTTCTTAAGAGGGCAGCGG 59.531 52.381 5.12 0.00 0.00 5.52
8148 8965 1.866601 GGTTTGCTTTGCATTGTGGTC 59.133 47.619 0.00 0.00 38.76 4.02
8149 8966 2.548875 GTTTGCTTTGCATTGTGGTCA 58.451 42.857 0.00 0.00 38.76 4.02
8150 8967 2.512485 TTGCTTTGCATTGTGGTCAG 57.488 45.000 0.00 0.00 38.76 3.51
8151 8968 1.689984 TGCTTTGCATTGTGGTCAGA 58.310 45.000 0.00 0.00 31.71 3.27
8154 8971 2.606308 GCTTTGCATTGTGGTCAGACAG 60.606 50.000 2.17 0.00 0.00 3.51
8161 8978 2.890808 TGTGGTCAGACAGTGTCTTC 57.109 50.000 23.33 17.67 41.37 2.87
8171 8988 5.182190 TCAGACAGTGTCTTCTGATCTACAC 59.818 44.000 23.33 8.71 42.67 2.90
8176 8993 5.568685 GTGTCTTCTGATCTACACTAGCA 57.431 43.478 9.24 0.00 39.27 3.49
8177 8994 5.955488 GTGTCTTCTGATCTACACTAGCAA 58.045 41.667 9.24 0.00 39.27 3.91
8178 8995 6.033341 GTGTCTTCTGATCTACACTAGCAAG 58.967 44.000 9.24 0.00 39.27 4.01
8179 8996 5.946377 TGTCTTCTGATCTACACTAGCAAGA 59.054 40.000 0.00 0.00 0.00 3.02
8180 8997 6.605194 TGTCTTCTGATCTACACTAGCAAGAT 59.395 38.462 0.00 2.59 32.70 2.40
8181 8998 6.917477 GTCTTCTGATCTACACTAGCAAGATG 59.083 42.308 6.77 0.00 30.19 2.90
8182 8999 5.193663 TCTGATCTACACTAGCAAGATGC 57.806 43.478 6.77 0.00 45.46 3.91
8183 9000 4.038522 TCTGATCTACACTAGCAAGATGCC 59.961 45.833 6.77 0.00 46.52 4.40
8184 9001 3.070159 TGATCTACACTAGCAAGATGCCC 59.930 47.826 6.77 0.00 46.52 5.36
8185 9002 1.409064 TCTACACTAGCAAGATGCCCG 59.591 52.381 0.00 0.00 46.52 6.13
8186 9003 1.137086 CTACACTAGCAAGATGCCCGT 59.863 52.381 0.00 0.00 46.52 5.28
8187 9004 0.391661 ACACTAGCAAGATGCCCGTG 60.392 55.000 15.58 15.58 46.52 4.94
8188 9005 1.450312 ACTAGCAAGATGCCCGTGC 60.450 57.895 6.11 6.11 46.52 5.34
8212 9029 3.449377 TTGCATGGAACATCAAGATGCAT 59.551 39.130 9.85 0.00 46.44 3.96
8213 9030 4.081365 TTGCATGGAACATCAAGATGCATT 60.081 37.500 9.85 0.00 46.44 3.56
8214 9031 5.569832 TTGCATGGAACATCAAGATGCATTT 60.570 36.000 9.85 0.00 46.44 2.32
8215 9032 7.020881 TTGCATGGAACATCAAGATGCATTTT 61.021 34.615 9.85 0.00 46.44 1.82
8216 9033 8.438654 TTGCATGGAACATCAAGATGCATTTTT 61.439 33.333 9.85 0.00 46.44 1.94
8241 9058 9.522804 TTTTACAAATACTTGTTGTGATTGACC 57.477 29.630 0.00 0.00 43.45 4.02
8242 9059 6.084326 ACAAATACTTGTTGTGATTGACCC 57.916 37.500 0.00 0.00 43.45 4.46
8243 9060 5.596361 ACAAATACTTGTTGTGATTGACCCA 59.404 36.000 0.00 0.00 43.45 4.51
8244 9061 6.267471 ACAAATACTTGTTGTGATTGACCCAT 59.733 34.615 0.00 0.00 43.45 4.00
8245 9062 5.902613 ATACTTGTTGTGATTGACCCATG 57.097 39.130 0.00 0.00 0.00 3.66
8246 9063 2.297033 ACTTGTTGTGATTGACCCATGC 59.703 45.455 0.00 0.00 0.00 4.06
8247 9064 0.880441 TGTTGTGATTGACCCATGCG 59.120 50.000 0.00 0.00 0.00 4.73
8248 9065 0.171007 GTTGTGATTGACCCATGCGG 59.829 55.000 0.00 0.00 37.81 5.69
8258 9075 4.800554 CCATGCGGGAGTAATCCC 57.199 61.111 18.69 18.69 46.43 3.85
8273 9090 8.570068 GGAGTAATCCCATGTGTAAAAACTAA 57.430 34.615 0.00 0.00 0.00 2.24
8274 9091 9.185680 GGAGTAATCCCATGTGTAAAAACTAAT 57.814 33.333 0.00 0.00 0.00 1.73
8276 9093 9.747898 AGTAATCCCATGTGTAAAAACTAATGA 57.252 29.630 0.00 0.00 0.00 2.57
8281 9098 9.693739 TCCCATGTGTAAAAACTAATGATATGT 57.306 29.630 0.00 0.00 0.00 2.29
8282 9099 9.950680 CCCATGTGTAAAAACTAATGATATGTC 57.049 33.333 0.00 0.00 0.00 3.06
8283 9100 9.650371 CCATGTGTAAAAACTAATGATATGTCG 57.350 33.333 0.00 0.00 0.00 4.35
8286 9103 9.863845 TGTGTAAAAACTAATGATATGTCGAGA 57.136 29.630 0.00 0.00 0.00 4.04
8291 9108 8.879342 AAAACTAATGATATGTCGAGAAGGAG 57.121 34.615 0.00 0.00 0.00 3.69
8292 9109 7.825331 AACTAATGATATGTCGAGAAGGAGA 57.175 36.000 0.00 0.00 0.00 3.71
8293 9110 7.825331 ACTAATGATATGTCGAGAAGGAGAA 57.175 36.000 0.00 0.00 0.00 2.87
8294 9111 7.881142 ACTAATGATATGTCGAGAAGGAGAAG 58.119 38.462 0.00 0.00 0.00 2.85
8295 9112 6.968263 AATGATATGTCGAGAAGGAGAAGA 57.032 37.500 0.00 0.00 0.00 2.87
8296 9113 6.573664 ATGATATGTCGAGAAGGAGAAGAG 57.426 41.667 0.00 0.00 0.00 2.85
8297 9114 5.685728 TGATATGTCGAGAAGGAGAAGAGA 58.314 41.667 0.00 0.00 0.00 3.10
8298 9115 6.303054 TGATATGTCGAGAAGGAGAAGAGAT 58.697 40.000 0.00 0.00 0.00 2.75
8299 9116 7.454225 TGATATGTCGAGAAGGAGAAGAGATA 58.546 38.462 0.00 0.00 0.00 1.98
8300 9117 7.939588 TGATATGTCGAGAAGGAGAAGAGATAA 59.060 37.037 0.00 0.00 0.00 1.75
8301 9118 6.633500 ATGTCGAGAAGGAGAAGAGATAAG 57.367 41.667 0.00 0.00 0.00 1.73
8302 9119 4.884744 TGTCGAGAAGGAGAAGAGATAAGG 59.115 45.833 0.00 0.00 0.00 2.69
8303 9120 4.885325 GTCGAGAAGGAGAAGAGATAAGGT 59.115 45.833 0.00 0.00 0.00 3.50
8304 9121 4.884744 TCGAGAAGGAGAAGAGATAAGGTG 59.115 45.833 0.00 0.00 0.00 4.00
8305 9122 4.884744 CGAGAAGGAGAAGAGATAAGGTGA 59.115 45.833 0.00 0.00 0.00 4.02
8306 9123 5.008613 CGAGAAGGAGAAGAGATAAGGTGAG 59.991 48.000 0.00 0.00 0.00 3.51
8307 9124 5.208121 AGAAGGAGAAGAGATAAGGTGAGG 58.792 45.833 0.00 0.00 0.00 3.86
8308 9125 4.890499 AGGAGAAGAGATAAGGTGAGGA 57.110 45.455 0.00 0.00 0.00 3.71
8309 9126 4.803452 AGGAGAAGAGATAAGGTGAGGAG 58.197 47.826 0.00 0.00 0.00 3.69
8310 9127 4.231890 AGGAGAAGAGATAAGGTGAGGAGT 59.768 45.833 0.00 0.00 0.00 3.85
8311 9128 4.340950 GGAGAAGAGATAAGGTGAGGAGTG 59.659 50.000 0.00 0.00 0.00 3.51
8312 9129 4.285863 AGAAGAGATAAGGTGAGGAGTGG 58.714 47.826 0.00 0.00 0.00 4.00
8313 9130 3.039252 AGAGATAAGGTGAGGAGTGGG 57.961 52.381 0.00 0.00 0.00 4.61
8314 9131 2.043227 GAGATAAGGTGAGGAGTGGGG 58.957 57.143 0.00 0.00 0.00 4.96
8315 9132 1.366435 AGATAAGGTGAGGAGTGGGGT 59.634 52.381 0.00 0.00 0.00 4.95
8316 9133 1.486726 GATAAGGTGAGGAGTGGGGTG 59.513 57.143 0.00 0.00 0.00 4.61
8317 9134 0.192566 TAAGGTGAGGAGTGGGGTGT 59.807 55.000 0.00 0.00 0.00 4.16
8318 9135 1.418908 AAGGTGAGGAGTGGGGTGTG 61.419 60.000 0.00 0.00 0.00 3.82
8319 9136 2.750350 GTGAGGAGTGGGGTGTGG 59.250 66.667 0.00 0.00 0.00 4.17
8320 9137 2.147387 GTGAGGAGTGGGGTGTGGT 61.147 63.158 0.00 0.00 0.00 4.16
8321 9138 2.146724 TGAGGAGTGGGGTGTGGTG 61.147 63.158 0.00 0.00 0.00 4.17
8322 9139 2.854032 AGGAGTGGGGTGTGGTGG 60.854 66.667 0.00 0.00 0.00 4.61
8323 9140 3.175710 GGAGTGGGGTGTGGTGGT 61.176 66.667 0.00 0.00 0.00 4.16
8324 9141 2.113139 GAGTGGGGTGTGGTGGTG 59.887 66.667 0.00 0.00 0.00 4.17
8325 9142 3.491598 GAGTGGGGTGTGGTGGTGG 62.492 68.421 0.00 0.00 0.00 4.61
8326 9143 3.816090 GTGGGGTGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
8327 9144 3.814906 TGGGGTGTGGTGGTGGTG 61.815 66.667 0.00 0.00 0.00 4.17
8328 9145 4.596585 GGGGTGTGGTGGTGGTGG 62.597 72.222 0.00 0.00 0.00 4.61
8329 9146 3.816090 GGGTGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
8330 9147 2.518349 GGTGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
8331 9148 2.518349 GTGTGGTGGTGGTGGTGG 60.518 66.667 0.00 0.00 0.00 4.61
8332 9149 3.018193 TGTGGTGGTGGTGGTGGT 61.018 61.111 0.00 0.00 0.00 4.16
8333 9150 2.277404 GTGGTGGTGGTGGTGGTT 59.723 61.111 0.00 0.00 0.00 3.67
8334 9151 2.124693 GTGGTGGTGGTGGTGGTTG 61.125 63.158 0.00 0.00 0.00 3.77
8335 9152 2.520741 GGTGGTGGTGGTGGTTGG 60.521 66.667 0.00 0.00 0.00 3.77
8336 9153 2.277404 GTGGTGGTGGTGGTTGGT 59.723 61.111 0.00 0.00 0.00 3.67
8337 9154 2.124693 GTGGTGGTGGTGGTTGGTG 61.125 63.158 0.00 0.00 0.00 4.17
8338 9155 2.520741 GGTGGTGGTGGTTGGTGG 60.521 66.667 0.00 0.00 0.00 4.61
8339 9156 2.277404 GTGGTGGTGGTTGGTGGT 59.723 61.111 0.00 0.00 0.00 4.16
8340 9157 1.380650 GTGGTGGTGGTTGGTGGTT 60.381 57.895 0.00 0.00 0.00 3.67
8341 9158 1.380515 TGGTGGTGGTTGGTGGTTG 60.381 57.895 0.00 0.00 0.00 3.77
8342 9159 2.131067 GGTGGTGGTTGGTGGTTGG 61.131 63.158 0.00 0.00 0.00 3.77
8343 9160 1.076632 GTGGTGGTTGGTGGTTGGA 60.077 57.895 0.00 0.00 0.00 3.53
8344 9161 1.076632 TGGTGGTTGGTGGTTGGAC 60.077 57.895 0.00 0.00 0.00 4.02
8345 9162 1.229076 GGTGGTTGGTGGTTGGACT 59.771 57.895 0.00 0.00 0.00 3.85
8346 9163 0.475044 GGTGGTTGGTGGTTGGACTA 59.525 55.000 0.00 0.00 0.00 2.59
8347 9164 1.133730 GGTGGTTGGTGGTTGGACTAA 60.134 52.381 0.00 0.00 0.00 2.24
8348 9165 2.227194 GTGGTTGGTGGTTGGACTAAG 58.773 52.381 0.00 0.00 0.00 2.18
8349 9166 1.244816 GGTTGGTGGTTGGACTAAGC 58.755 55.000 0.00 0.00 37.30 3.09
8350 9167 0.872388 GTTGGTGGTTGGACTAAGCG 59.128 55.000 0.00 0.00 39.62 4.68
8351 9168 0.250553 TTGGTGGTTGGACTAAGCGG 60.251 55.000 0.00 0.00 39.62 5.52
8352 9169 1.122632 TGGTGGTTGGACTAAGCGGA 61.123 55.000 0.00 0.00 39.62 5.54
8353 9170 0.391263 GGTGGTTGGACTAAGCGGAG 60.391 60.000 0.00 0.00 39.62 4.63
8354 9171 0.391263 GTGGTTGGACTAAGCGGAGG 60.391 60.000 0.00 0.00 39.62 4.30
8355 9172 1.449778 GGTTGGACTAAGCGGAGGC 60.450 63.158 0.00 0.00 40.37 4.70
8356 9173 1.295423 GTTGGACTAAGCGGAGGCA 59.705 57.895 0.00 0.00 43.41 4.75
8357 9174 0.107654 GTTGGACTAAGCGGAGGCAT 60.108 55.000 0.00 0.00 43.41 4.40
8358 9175 0.107703 TTGGACTAAGCGGAGGCATG 60.108 55.000 0.00 0.00 43.41 4.06
8359 9176 0.975556 TGGACTAAGCGGAGGCATGA 60.976 55.000 0.00 0.00 43.41 3.07
8360 9177 0.249657 GGACTAAGCGGAGGCATGAG 60.250 60.000 0.00 0.00 43.41 2.90
8361 9178 0.249657 GACTAAGCGGAGGCATGAGG 60.250 60.000 0.00 0.00 43.41 3.86
8362 9179 0.687757 ACTAAGCGGAGGCATGAGGA 60.688 55.000 0.00 0.00 43.41 3.71
8363 9180 0.683973 CTAAGCGGAGGCATGAGGAT 59.316 55.000 0.00 0.00 43.41 3.24
8364 9181 0.394192 TAAGCGGAGGCATGAGGATG 59.606 55.000 0.00 0.00 43.41 3.51
8365 9182 2.281345 GCGGAGGCATGAGGATGG 60.281 66.667 0.00 0.00 39.62 3.51
8366 9183 2.429058 CGGAGGCATGAGGATGGG 59.571 66.667 0.00 0.00 0.00 4.00
8367 9184 2.114838 GGAGGCATGAGGATGGGC 59.885 66.667 0.00 0.00 0.00 5.36
8368 9185 2.760378 GGAGGCATGAGGATGGGCA 61.760 63.158 0.00 0.00 0.00 5.36
8369 9186 1.459369 GAGGCATGAGGATGGGCAT 59.541 57.895 0.00 0.00 0.00 4.40
8370 9187 0.894184 GAGGCATGAGGATGGGCATG 60.894 60.000 0.00 0.00 43.56 4.06
8371 9188 1.906824 GGCATGAGGATGGGCATGG 60.907 63.158 0.00 0.00 41.58 3.66
8372 9189 1.152138 GCATGAGGATGGGCATGGA 59.848 57.895 0.00 0.00 41.58 3.41
8373 9190 0.894184 GCATGAGGATGGGCATGGAG 60.894 60.000 0.00 0.00 41.58 3.86
8374 9191 0.769247 CATGAGGATGGGCATGGAGA 59.231 55.000 0.00 0.00 38.52 3.71
8375 9192 1.354705 CATGAGGATGGGCATGGAGAT 59.645 52.381 0.00 0.00 38.52 2.75
8376 9193 0.769247 TGAGGATGGGCATGGAGATG 59.231 55.000 0.00 0.00 0.00 2.90
8377 9194 0.769873 GAGGATGGGCATGGAGATGT 59.230 55.000 0.00 0.00 31.50 3.06
8378 9195 0.769873 AGGATGGGCATGGAGATGTC 59.230 55.000 0.00 0.00 32.98 3.06
8379 9196 0.475475 GGATGGGCATGGAGATGTCA 59.525 55.000 0.00 0.00 35.73 3.58
8380 9197 1.544982 GGATGGGCATGGAGATGTCAG 60.545 57.143 0.00 0.00 35.73 3.51
8381 9198 1.419012 GATGGGCATGGAGATGTCAGA 59.581 52.381 0.00 0.00 35.73 3.27
8382 9199 1.514983 TGGGCATGGAGATGTCAGAT 58.485 50.000 0.00 0.00 35.73 2.90
8383 9200 1.848388 TGGGCATGGAGATGTCAGATT 59.152 47.619 0.00 0.00 35.73 2.40
8384 9201 2.228059 GGGCATGGAGATGTCAGATTG 58.772 52.381 0.00 0.00 35.73 2.67
8385 9202 2.422519 GGGCATGGAGATGTCAGATTGT 60.423 50.000 0.00 0.00 35.73 2.71
8386 9203 3.285484 GGCATGGAGATGTCAGATTGTT 58.715 45.455 0.00 0.00 34.04 2.83
8387 9204 3.314635 GGCATGGAGATGTCAGATTGTTC 59.685 47.826 0.00 0.00 34.04 3.18
8388 9205 3.314635 GCATGGAGATGTCAGATTGTTCC 59.685 47.826 0.00 0.00 31.50 3.62
8389 9206 4.520179 CATGGAGATGTCAGATTGTTCCA 58.480 43.478 0.00 0.00 37.61 3.53
8390 9207 4.212143 TGGAGATGTCAGATTGTTCCAG 57.788 45.455 0.00 0.00 0.00 3.86
8391 9208 3.840078 TGGAGATGTCAGATTGTTCCAGA 59.160 43.478 0.00 0.00 0.00 3.86
8392 9209 4.081254 TGGAGATGTCAGATTGTTCCAGAG 60.081 45.833 0.00 0.00 0.00 3.35
8393 9210 4.161189 GGAGATGTCAGATTGTTCCAGAGA 59.839 45.833 0.00 0.00 0.00 3.10
8394 9211 5.083533 AGATGTCAGATTGTTCCAGAGAC 57.916 43.478 0.00 0.00 0.00 3.36
8395 9212 4.776837 AGATGTCAGATTGTTCCAGAGACT 59.223 41.667 0.00 0.00 0.00 3.24
8396 9213 4.963318 TGTCAGATTGTTCCAGAGACTT 57.037 40.909 0.00 0.00 0.00 3.01
8397 9214 4.887748 TGTCAGATTGTTCCAGAGACTTC 58.112 43.478 0.00 0.00 0.00 3.01
8398 9215 4.249661 GTCAGATTGTTCCAGAGACTTCC 58.750 47.826 0.00 0.00 0.00 3.46
8399 9216 4.020662 GTCAGATTGTTCCAGAGACTTCCT 60.021 45.833 0.00 0.00 0.00 3.36
8400 9217 4.020751 TCAGATTGTTCCAGAGACTTCCTG 60.021 45.833 0.00 0.00 0.00 3.86
8401 9218 3.906846 AGATTGTTCCAGAGACTTCCTGT 59.093 43.478 0.00 0.00 0.00 4.00
8402 9219 4.349342 AGATTGTTCCAGAGACTTCCTGTT 59.651 41.667 0.00 0.00 0.00 3.16
8403 9220 4.503714 TTGTTCCAGAGACTTCCTGTTT 57.496 40.909 0.00 0.00 0.00 2.83
8404 9221 4.503714 TGTTCCAGAGACTTCCTGTTTT 57.496 40.909 0.00 0.00 0.00 2.43
8405 9222 5.623956 TGTTCCAGAGACTTCCTGTTTTA 57.376 39.130 0.00 0.00 0.00 1.52
8406 9223 5.996644 TGTTCCAGAGACTTCCTGTTTTAA 58.003 37.500 0.00 0.00 0.00 1.52
8407 9224 6.601332 TGTTCCAGAGACTTCCTGTTTTAAT 58.399 36.000 0.00 0.00 0.00 1.40
8408 9225 7.060421 TGTTCCAGAGACTTCCTGTTTTAATT 58.940 34.615 0.00 0.00 0.00 1.40
8409 9226 7.013274 TGTTCCAGAGACTTCCTGTTTTAATTG 59.987 37.037 0.00 0.00 0.00 2.32
8410 9227 5.473504 TCCAGAGACTTCCTGTTTTAATTGC 59.526 40.000 0.00 0.00 0.00 3.56
8411 9228 5.474876 CCAGAGACTTCCTGTTTTAATTGCT 59.525 40.000 0.00 0.00 0.00 3.91
8412 9229 6.348868 CCAGAGACTTCCTGTTTTAATTGCTC 60.349 42.308 0.00 0.00 0.00 4.26
8413 9230 6.205464 CAGAGACTTCCTGTTTTAATTGCTCA 59.795 38.462 0.00 0.00 0.00 4.26
8414 9231 6.772716 AGAGACTTCCTGTTTTAATTGCTCAA 59.227 34.615 0.00 0.00 0.00 3.02
8415 9232 6.739112 AGACTTCCTGTTTTAATTGCTCAAC 58.261 36.000 0.00 0.00 0.00 3.18
8416 9233 6.321181 AGACTTCCTGTTTTAATTGCTCAACA 59.679 34.615 0.00 0.00 0.00 3.33
8417 9234 6.872920 ACTTCCTGTTTTAATTGCTCAACAA 58.127 32.000 0.00 0.00 44.01 2.83
8437 9254 5.102953 CAATGAAGTTGTGGGAGATAGGA 57.897 43.478 0.00 0.00 33.01 2.94
8438 9255 5.688807 CAATGAAGTTGTGGGAGATAGGAT 58.311 41.667 0.00 0.00 33.01 3.24
8439 9256 4.760530 TGAAGTTGTGGGAGATAGGATG 57.239 45.455 0.00 0.00 0.00 3.51
8440 9257 4.361783 TGAAGTTGTGGGAGATAGGATGA 58.638 43.478 0.00 0.00 0.00 2.92
8441 9258 4.782691 TGAAGTTGTGGGAGATAGGATGAA 59.217 41.667 0.00 0.00 0.00 2.57
8442 9259 4.762289 AGTTGTGGGAGATAGGATGAAC 57.238 45.455 0.00 0.00 0.00 3.18
8443 9260 3.133003 AGTTGTGGGAGATAGGATGAACG 59.867 47.826 0.00 0.00 0.00 3.95
8444 9261 3.026707 TGTGGGAGATAGGATGAACGA 57.973 47.619 0.00 0.00 0.00 3.85
8445 9262 2.959030 TGTGGGAGATAGGATGAACGAG 59.041 50.000 0.00 0.00 0.00 4.18
8446 9263 3.223435 GTGGGAGATAGGATGAACGAGA 58.777 50.000 0.00 0.00 0.00 4.04
8447 9264 3.254657 GTGGGAGATAGGATGAACGAGAG 59.745 52.174 0.00 0.00 0.00 3.20
8448 9265 3.138468 TGGGAGATAGGATGAACGAGAGA 59.862 47.826 0.00 0.00 0.00 3.10
8449 9266 4.145807 GGGAGATAGGATGAACGAGAGAA 58.854 47.826 0.00 0.00 0.00 2.87
8450 9267 4.217550 GGGAGATAGGATGAACGAGAGAAG 59.782 50.000 0.00 0.00 0.00 2.85
8451 9268 4.217550 GGAGATAGGATGAACGAGAGAAGG 59.782 50.000 0.00 0.00 0.00 3.46
8452 9269 3.572255 AGATAGGATGAACGAGAGAAGGC 59.428 47.826 0.00 0.00 0.00 4.35
8453 9270 0.827368 AGGATGAACGAGAGAAGGCC 59.173 55.000 0.00 0.00 0.00 5.19
8454 9271 0.827368 GGATGAACGAGAGAAGGCCT 59.173 55.000 0.00 0.00 0.00 5.19
8455 9272 1.208293 GGATGAACGAGAGAAGGCCTT 59.792 52.381 20.65 20.65 0.00 4.35
8456 9273 2.431057 GGATGAACGAGAGAAGGCCTTA 59.569 50.000 20.54 0.00 0.00 2.69
8457 9274 3.070302 GGATGAACGAGAGAAGGCCTTAT 59.930 47.826 20.54 17.12 0.00 1.73
8458 9275 3.802948 TGAACGAGAGAAGGCCTTATC 57.197 47.619 29.04 29.04 0.00 1.75
8459 9276 3.366396 TGAACGAGAGAAGGCCTTATCT 58.634 45.455 36.72 36.72 43.07 1.98
8460 9277 3.131223 TGAACGAGAGAAGGCCTTATCTG 59.869 47.826 40.09 31.49 40.77 2.90
8461 9278 1.410882 ACGAGAGAAGGCCTTATCTGC 59.589 52.381 40.09 28.93 40.77 4.26
8462 9279 1.410517 CGAGAGAAGGCCTTATCTGCA 59.589 52.381 40.09 0.00 40.77 4.41
8463 9280 2.159043 CGAGAGAAGGCCTTATCTGCAA 60.159 50.000 40.09 0.00 40.77 4.08
8464 9281 3.679917 CGAGAGAAGGCCTTATCTGCAAA 60.680 47.826 40.09 0.00 40.77 3.68
8465 9282 4.459330 GAGAGAAGGCCTTATCTGCAAAT 58.541 43.478 40.09 20.38 40.77 2.32
8466 9283 4.205587 AGAGAAGGCCTTATCTGCAAATG 58.794 43.478 35.88 0.00 39.41 2.32
8467 9284 3.950395 GAGAAGGCCTTATCTGCAAATGT 59.050 43.478 28.96 0.00 0.00 2.71
8468 9285 3.698040 AGAAGGCCTTATCTGCAAATGTG 59.302 43.478 20.54 0.00 0.00 3.21
8469 9286 3.370840 AGGCCTTATCTGCAAATGTGA 57.629 42.857 0.00 0.00 0.00 3.58
8470 9287 3.700538 AGGCCTTATCTGCAAATGTGAA 58.299 40.909 0.00 0.00 0.00 3.18
8471 9288 3.698040 AGGCCTTATCTGCAAATGTGAAG 59.302 43.478 0.00 0.00 0.00 3.02
8472 9289 3.696051 GGCCTTATCTGCAAATGTGAAGA 59.304 43.478 0.00 0.00 44.02 2.87
8473 9290 4.201990 GGCCTTATCTGCAAATGTGAAGAG 60.202 45.833 0.00 0.00 43.08 2.85
8474 9291 4.637534 GCCTTATCTGCAAATGTGAAGAGA 59.362 41.667 0.00 0.00 43.08 3.10
8475 9292 5.124457 GCCTTATCTGCAAATGTGAAGAGAA 59.876 40.000 0.88 0.88 43.08 2.87
8478 9295 5.624344 ATCTGCAAATGTGAAGAGAAGTG 57.376 39.130 0.00 0.00 43.08 3.16
8479 9296 4.454678 TCTGCAAATGTGAAGAGAAGTGT 58.545 39.130 0.00 0.00 34.14 3.55
8480 9297 4.274214 TCTGCAAATGTGAAGAGAAGTGTG 59.726 41.667 0.00 0.00 34.14 3.82
8481 9298 3.316029 TGCAAATGTGAAGAGAAGTGTGG 59.684 43.478 0.00 0.00 0.00 4.17
8482 9299 3.304928 GCAAATGTGAAGAGAAGTGTGGG 60.305 47.826 0.00 0.00 0.00 4.61
8483 9300 3.864789 AATGTGAAGAGAAGTGTGGGT 57.135 42.857 0.00 0.00 0.00 4.51
8484 9301 4.974645 AATGTGAAGAGAAGTGTGGGTA 57.025 40.909 0.00 0.00 0.00 3.69
8485 9302 5.505181 AATGTGAAGAGAAGTGTGGGTAT 57.495 39.130 0.00 0.00 0.00 2.73
8486 9303 4.974645 TGTGAAGAGAAGTGTGGGTATT 57.025 40.909 0.00 0.00 0.00 1.89
8487 9304 5.304686 TGTGAAGAGAAGTGTGGGTATTT 57.695 39.130 0.00 0.00 0.00 1.40
8488 9305 5.305585 TGTGAAGAGAAGTGTGGGTATTTC 58.694 41.667 0.00 0.00 0.00 2.17
8489 9306 5.071788 TGTGAAGAGAAGTGTGGGTATTTCT 59.928 40.000 0.00 0.00 32.87 2.52
8490 9307 5.998363 GTGAAGAGAAGTGTGGGTATTTCTT 59.002 40.000 0.00 0.00 30.49 2.52
8491 9308 6.486993 GTGAAGAGAAGTGTGGGTATTTCTTT 59.513 38.462 0.00 0.00 30.49 2.52
8492 9309 6.486657 TGAAGAGAAGTGTGGGTATTTCTTTG 59.513 38.462 0.00 0.00 30.49 2.77
8493 9310 5.941788 AGAGAAGTGTGGGTATTTCTTTGT 58.058 37.500 0.00 0.00 30.49 2.83
8494 9311 7.074653 AGAGAAGTGTGGGTATTTCTTTGTA 57.925 36.000 0.00 0.00 30.49 2.41
8495 9312 7.514721 AGAGAAGTGTGGGTATTTCTTTGTAA 58.485 34.615 0.00 0.00 30.49 2.41
8496 9313 7.996644 AGAGAAGTGTGGGTATTTCTTTGTAAA 59.003 33.333 0.00 0.00 30.49 2.01
8497 9314 8.528044 AGAAGTGTGGGTATTTCTTTGTAAAA 57.472 30.769 0.00 0.00 0.00 1.52
8498 9315 9.143155 AGAAGTGTGGGTATTTCTTTGTAAAAT 57.857 29.630 0.00 0.00 0.00 1.82
8499 9316 9.758651 GAAGTGTGGGTATTTCTTTGTAAAATT 57.241 29.630 0.00 0.00 0.00 1.82
8500 9317 9.541143 AAGTGTGGGTATTTCTTTGTAAAATTG 57.459 29.630 0.00 0.00 0.00 2.32
8501 9318 7.655732 AGTGTGGGTATTTCTTTGTAAAATTGC 59.344 33.333 0.00 0.00 0.00 3.56
8502 9319 6.931840 TGTGGGTATTTCTTTGTAAAATTGCC 59.068 34.615 0.00 0.00 0.00 4.52
8503 9320 6.931840 GTGGGTATTTCTTTGTAAAATTGCCA 59.068 34.615 0.00 0.00 0.00 4.92
8504 9321 7.606073 GTGGGTATTTCTTTGTAAAATTGCCAT 59.394 33.333 0.00 0.00 0.00 4.40
8505 9322 8.816894 TGGGTATTTCTTTGTAAAATTGCCATA 58.183 29.630 0.00 0.00 0.00 2.74
8506 9323 9.313118 GGGTATTTCTTTGTAAAATTGCCATAG 57.687 33.333 0.00 0.00 0.00 2.23
8507 9324 9.869757 GGTATTTCTTTGTAAAATTGCCATAGT 57.130 29.630 0.00 0.00 0.00 2.12
8521 9338 7.672983 ATTGCCATAGTATGTTTTCTATCCG 57.327 36.000 9.28 0.00 0.00 4.18
8522 9339 6.169557 TGCCATAGTATGTTTTCTATCCGT 57.830 37.500 9.28 0.00 0.00 4.69
8523 9340 6.220930 TGCCATAGTATGTTTTCTATCCGTC 58.779 40.000 9.28 0.00 0.00 4.79
8524 9341 6.183360 TGCCATAGTATGTTTTCTATCCGTCA 60.183 38.462 9.28 0.00 0.00 4.35
8525 9342 6.366332 GCCATAGTATGTTTTCTATCCGTCAG 59.634 42.308 9.28 0.00 0.00 3.51
8526 9343 7.658261 CCATAGTATGTTTTCTATCCGTCAGA 58.342 38.462 9.28 0.00 0.00 3.27
8527 9344 8.307483 CCATAGTATGTTTTCTATCCGTCAGAT 58.693 37.037 9.28 0.00 39.15 2.90
8535 9352 9.297037 TGTTTTCTATCCGTCAGATATAGATCA 57.703 33.333 0.00 0.00 36.84 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.580995 TGTGTCTTTTCAGCCGGAATAAAA 59.419 37.500 5.05 6.86 34.91 1.52
1 2 4.023536 GTGTGTCTTTTCAGCCGGAATAAA 60.024 41.667 5.05 0.00 34.91 1.40
2 3 3.500680 GTGTGTCTTTTCAGCCGGAATAA 59.499 43.478 5.05 0.00 34.91 1.40
4 5 1.880027 GTGTGTCTTTTCAGCCGGAAT 59.120 47.619 5.05 0.00 34.91 3.01
5 6 1.305201 GTGTGTCTTTTCAGCCGGAA 58.695 50.000 5.05 0.00 0.00 4.30
6 7 0.179234 TGTGTGTCTTTTCAGCCGGA 59.821 50.000 5.05 0.00 0.00 5.14
7 8 1.238439 ATGTGTGTCTTTTCAGCCGG 58.762 50.000 0.00 0.00 0.00 6.13
8 9 2.159653 GCTATGTGTGTCTTTTCAGCCG 60.160 50.000 0.00 0.00 0.00 5.52
24 25 0.034616 GCAGCAGGGACTAGGCTATG 59.965 60.000 0.00 0.00 35.42 2.23
47 49 0.308684 CGCACCGATGAATGATTGGG 59.691 55.000 0.00 0.00 39.81 4.12
387 416 0.701147 CCTGCCCTTTTTCTCTCCCT 59.299 55.000 0.00 0.00 0.00 4.20
403 432 4.426313 GGGACGGGGGAAAGCCTG 62.426 72.222 0.00 0.00 0.00 4.85
561 599 0.383949 GCCAAAACAGAGCGGAAACA 59.616 50.000 0.00 0.00 0.00 2.83
570 608 2.036604 GGGAAAAATCCGCCAAAACAGA 59.963 45.455 0.00 0.00 0.00 3.41
727 766 1.512156 GAACGCGCTTTTCCCCTCAA 61.512 55.000 5.73 0.00 0.00 3.02
728 767 1.964373 GAACGCGCTTTTCCCCTCA 60.964 57.895 5.73 0.00 0.00 3.86
729 768 1.235281 AAGAACGCGCTTTTCCCCTC 61.235 55.000 5.73 0.00 0.00 4.30
783 824 1.547901 GGACCAAAACTTCCAGGAGGG 60.548 57.143 3.14 0.00 34.83 4.30
789 830 0.106918 ACAGCGGACCAAAACTTCCA 60.107 50.000 0.00 0.00 0.00 3.53
798 839 3.342377 TGAATGATTAACAGCGGACCA 57.658 42.857 0.00 0.00 0.00 4.02
799 840 3.689649 ACTTGAATGATTAACAGCGGACC 59.310 43.478 0.00 0.00 0.00 4.46
816 857 5.509716 TCGAGTAGAAAGTCAACACTTGA 57.490 39.130 0.00 0.00 42.45 3.02
820 861 4.201504 GCGAATCGAGTAGAAAGTCAACAC 60.202 45.833 6.91 0.00 0.00 3.32
877 918 1.508632 ATGGAACGAAGTCAACACGG 58.491 50.000 0.00 0.00 45.00 4.94
905 947 4.675190 AAGCAGACATGACGAGAAAATG 57.325 40.909 0.00 0.00 0.00 2.32
928 970 4.792068 TCTGGGCACTTAGGGAATAATTG 58.208 43.478 0.00 0.00 0.00 2.32
939 981 2.808933 CGTTCTGGTTTCTGGGCACTTA 60.809 50.000 0.00 0.00 0.00 2.24
965 1007 2.871182 TCTCCAGCGTCACATATGTC 57.129 50.000 5.07 0.00 0.00 3.06
983 1025 3.743521 TCCATTAGCACCACAGCATATC 58.256 45.455 0.00 0.00 36.85 1.63
1037 1080 3.451141 TGCCAAACACAACAGGAATTC 57.549 42.857 0.00 0.00 0.00 2.17
1076 1119 3.485546 CGTCTAGAACTTCCTACACGAGC 60.486 52.174 0.00 0.00 34.45 5.03
1079 1122 2.783333 GCGTCTAGAACTTCCTACACG 58.217 52.381 0.00 0.00 35.24 4.49
1115 1158 3.314913 TCACTGAAACGAATTGCACATGT 59.685 39.130 0.00 0.00 0.00 3.21
1135 1178 3.083848 AACCACGCACGGTGTCTCA 62.084 57.895 10.24 0.00 45.52 3.27
1139 1182 4.849310 AGCAACCACGCACGGTGT 62.849 61.111 10.24 0.00 45.52 4.16
1140 1183 4.312231 CAGCAACCACGCACGGTG 62.312 66.667 3.15 3.15 46.57 4.94
1170 1213 1.871039 CCTGACCTGTAAACAACACGG 59.129 52.381 0.00 0.00 33.45 4.94
1172 1215 3.139077 CTCCCTGACCTGTAAACAACAC 58.861 50.000 0.00 0.00 33.45 3.32
1174 1217 2.779506 CCTCCCTGACCTGTAAACAAC 58.220 52.381 0.00 0.00 0.00 3.32
1175 1218 1.073284 GCCTCCCTGACCTGTAAACAA 59.927 52.381 0.00 0.00 0.00 2.83
1437 1480 5.288712 AGCGAATCTACGTTTGATAACACAG 59.711 40.000 0.00 0.00 33.75 3.66
1448 1491 4.494855 GGACTACGTAAGCGAATCTACGTT 60.495 45.833 11.92 0.00 45.30 3.99
1450 1493 3.247173 AGGACTACGTAAGCGAATCTACG 59.753 47.826 0.00 0.41 45.62 3.51
1482 1548 8.167345 CCACATGTTACTATCTAGTATACGACG 58.833 40.741 0.00 0.00 38.48 5.12
1506 1572 2.274645 CCACTGCCCGATTTTGCCA 61.275 57.895 0.00 0.00 0.00 4.92
1507 1573 1.815817 AACCACTGCCCGATTTTGCC 61.816 55.000 0.00 0.00 0.00 4.52
1512 1578 0.179004 TGAACAACCACTGCCCGATT 60.179 50.000 0.00 0.00 0.00 3.34
1513 1579 0.038166 ATGAACAACCACTGCCCGAT 59.962 50.000 0.00 0.00 0.00 4.18
1560 1631 2.079158 CCAAGCATGAGATGTTGTCGT 58.921 47.619 0.00 0.00 0.00 4.34
1561 1632 1.399440 CCCAAGCATGAGATGTTGTCG 59.601 52.381 0.00 0.00 0.00 4.35
1562 1633 2.681848 CTCCCAAGCATGAGATGTTGTC 59.318 50.000 0.00 0.00 0.00 3.18
1564 1635 2.422479 CACTCCCAAGCATGAGATGTTG 59.578 50.000 0.00 0.00 32.84 3.33
1633 1866 3.200605 TCACATAACTGATCCAGGCATGT 59.799 43.478 0.00 8.78 39.11 3.21
1726 1959 1.183676 ACTCCCAAGCGTAAGACCGT 61.184 55.000 0.00 0.00 43.02 4.83
1745 1978 6.658816 ACAAACAGCATCAGGATTATGTAACA 59.341 34.615 0.00 0.00 0.00 2.41
1820 2053 8.426881 TCAATGCCACAATCAAATCATTTATG 57.573 30.769 0.00 0.00 0.00 1.90
1868 2102 0.109532 TTGTCGCTTTGGTCATCCCA 59.890 50.000 0.00 0.00 43.27 4.37
1876 2110 1.197721 GTGAGACCATTGTCGCTTTGG 59.802 52.381 2.49 0.00 46.51 3.28
1881 2115 1.291877 AAGCGTGAGACCATTGTCGC 61.292 55.000 0.00 0.00 46.51 5.19
1888 2122 1.837051 ACTCCCAAGCGTGAGACCA 60.837 57.895 0.00 0.00 32.84 4.02
1896 2130 6.046593 TCTAAATAATACACACTCCCAAGCG 58.953 40.000 0.00 0.00 0.00 4.68
1906 2140 7.181305 TCCAGACAACCCTCTAAATAATACACA 59.819 37.037 0.00 0.00 0.00 3.72
1993 2227 4.260253 GCTGCGTACATAAAAAGAGTAGGC 60.260 45.833 0.00 0.00 45.01 3.93
2012 2246 3.984508 AATCATGCAACAGATAGCTGC 57.015 42.857 8.16 0.00 46.26 5.25
2073 2307 2.026262 ACGGACCAGTGGAAGCATATTT 60.026 45.455 18.40 0.00 0.00 1.40
2089 2323 2.706890 TGGAAGCCAGAATAAACGGAC 58.293 47.619 0.00 0.00 0.00 4.79
2124 2361 8.964476 ATCCTATGTCGATAGTTCAAACAAAT 57.036 30.769 0.00 0.00 30.98 2.32
2240 2477 5.851047 ACGGTAAATTAGAAACAACGGAG 57.149 39.130 0.00 0.00 0.00 4.63
2243 2480 7.667984 AAACAACGGTAAATTAGAAACAACG 57.332 32.000 0.00 0.00 0.00 4.10
2304 2541 6.423905 TCATTCTAAACAGACAAGGAAGAACG 59.576 38.462 0.00 0.00 0.00 3.95
2315 2552 8.424918 TCTGGGATCTTATCATTCTAAACAGAC 58.575 37.037 0.00 0.00 0.00 3.51
2372 2612 3.214696 CAGGGTATTCCTTGGATGTCC 57.785 52.381 0.00 0.00 45.47 4.02
2680 2929 1.522806 GTGTGTGCGTGTTGGGAGA 60.523 57.895 0.00 0.00 0.00 3.71
2691 2940 5.582269 AGAATATACTGTGTGATGTGTGTGC 59.418 40.000 0.00 0.00 0.00 4.57
2738 2987 7.545265 GCCAATGAAAAGATACACAAGCAATTA 59.455 33.333 0.00 0.00 0.00 1.40
2744 2993 5.630680 GTGTGCCAATGAAAAGATACACAAG 59.369 40.000 0.00 0.00 38.40 3.16
2842 3092 4.776837 TCAAAATGGATGTTGGCCAATAGT 59.223 37.500 23.66 10.78 39.21 2.12
2848 3098 6.598850 ACAAAATATCAAAATGGATGTTGGCC 59.401 34.615 0.00 0.00 30.33 5.36
2916 3166 4.589216 TTGCAGCTGCTTTATTCTTTGT 57.411 36.364 36.61 0.00 42.66 2.83
3136 3386 3.581024 TTCATCATGCAAGCAACTTCC 57.419 42.857 0.00 0.00 0.00 3.46
3416 3671 7.424803 TGAAAGTCACAGTATCAAAATTGTGG 58.575 34.615 0.00 0.00 40.87 4.17
3473 3728 4.024556 CCCATACTAAATTTCTCAGCTGCG 60.025 45.833 9.47 2.08 0.00 5.18
3916 4194 2.566833 AGGTGAGCATGCAGTAAACA 57.433 45.000 21.98 7.00 0.00 2.83
3940 4218 3.769300 TCAATAGTGCACTAGGAGCAAGA 59.231 43.478 29.05 16.00 44.64 3.02
4063 4367 7.175641 CCAACAATATCAGTCTCTTTTGAGGTT 59.824 37.037 0.00 0.00 46.22 3.50
4093 4397 6.349300 TGAAGAAGCAGACTCAAGTACTTTT 58.651 36.000 5.07 0.00 0.00 2.27
4515 4837 3.181497 GCATGAACACACACTCAACAAGT 60.181 43.478 0.00 0.00 39.44 3.16
4762 5091 6.604795 AGATGCCAAAAGTAAGCATATTGACT 59.395 34.615 0.00 0.00 46.81 3.41
4941 5321 5.121811 CCATACTTCCCAGTTCTCATTCAG 58.878 45.833 0.00 0.00 34.06 3.02
4943 5323 5.104259 ACCATACTTCCCAGTTCTCATTC 57.896 43.478 0.00 0.00 34.06 2.67
4989 5383 8.084684 GCCAAATGGAGATATAGGTCAAATTTC 58.915 37.037 2.98 0.00 37.39 2.17
5065 5500 1.996798 TGTAGAAGATAGAGGGGGCG 58.003 55.000 0.00 0.00 0.00 6.13
5066 5501 3.039011 TGTTGTAGAAGATAGAGGGGGC 58.961 50.000 0.00 0.00 0.00 5.80
5217 5816 6.663944 AAGATAGTTCAAAACATAGCCGTC 57.336 37.500 0.00 0.00 0.00 4.79
5283 5882 3.109044 AGAATGACTGGCAGATCGATG 57.891 47.619 23.66 0.00 0.00 3.84
5311 5911 3.585862 TGCAGCTTTCTAAACCTAGACG 58.414 45.455 0.00 0.00 33.73 4.18
5329 5929 3.623060 GTCCGAGAATAGAATTTGCTGCA 59.377 43.478 0.00 0.00 0.00 4.41
5461 6142 5.016831 TGCTAGATAAAGAGTGACTGGTGA 58.983 41.667 0.00 0.00 0.00 4.02
5590 6271 3.260128 TGAGAGATGCAAGAGATGTGTGT 59.740 43.478 0.00 0.00 0.00 3.72
5602 6294 1.065926 GTGGGTGTCATGAGAGATGCA 60.066 52.381 0.00 0.00 0.00 3.96
5603 6295 1.065926 TGTGGGTGTCATGAGAGATGC 60.066 52.381 0.00 0.00 0.00 3.91
5604 6296 3.339253 TTGTGGGTGTCATGAGAGATG 57.661 47.619 0.00 0.00 0.00 2.90
5605 6297 3.118112 GGATTGTGGGTGTCATGAGAGAT 60.118 47.826 0.00 0.00 0.00 2.75
5606 6298 2.237143 GGATTGTGGGTGTCATGAGAGA 59.763 50.000 0.00 0.00 0.00 3.10
5607 6299 2.636830 GGATTGTGGGTGTCATGAGAG 58.363 52.381 0.00 0.00 0.00 3.20
5608 6300 1.281867 GGGATTGTGGGTGTCATGAGA 59.718 52.381 0.00 0.00 0.00 3.27
5609 6301 1.683011 GGGGATTGTGGGTGTCATGAG 60.683 57.143 0.00 0.00 0.00 2.90
5610 6302 0.331278 GGGGATTGTGGGTGTCATGA 59.669 55.000 0.00 0.00 0.00 3.07
5768 6460 2.176273 GGTGGCAGTAGCGATGCAG 61.176 63.158 11.94 0.00 45.68 4.41
5837 6529 4.202398 GGATATGGATGAGGTGCTTCTTGA 60.202 45.833 0.00 0.00 0.00 3.02
5872 6564 0.898320 CTTGGATGTGGACGAGGAGT 59.102 55.000 0.00 0.00 0.00 3.85
5920 6612 3.052109 TGGATTAGGGCCTAAGAGTGAGA 60.052 47.826 28.46 5.97 29.02 3.27
5977 6669 4.572571 GTTGGTGGTGGTGGCGGA 62.573 66.667 0.00 0.00 0.00 5.54
5983 6675 2.195683 CTGCAGGTTGGTGGTGGT 59.804 61.111 5.57 0.00 0.00 4.16
7161 7891 4.119363 GGGCTCCAGGCTGATGCA 62.119 66.667 24.83 0.00 41.91 3.96
7233 7963 2.290008 TGCTTTTGATAGGTTCCTCGCA 60.290 45.455 0.00 0.00 0.00 5.10
7284 8014 5.524971 ACGTAAACCGGATTGATCTGATA 57.475 39.130 9.46 0.00 42.24 2.15
7425 8155 1.070786 GTCTGTGTCGGGGCTGAAA 59.929 57.895 0.00 0.00 0.00 2.69
7512 8242 0.953471 GCAGCGTGTCATGGTACCAA 60.953 55.000 20.76 0.00 0.00 3.67
7525 8255 1.160137 CTTTAGCCTCAAAGCAGCGT 58.840 50.000 0.00 0.00 34.23 5.07
7540 8270 1.226859 CGACATCCGCTCCGCTTTA 60.227 57.895 0.00 0.00 0.00 1.85
7691 8423 7.444183 GGCTATAGGCATCTGTACATTTGTTTA 59.556 37.037 20.73 0.00 44.01 2.01
7692 8424 6.263168 GGCTATAGGCATCTGTACATTTGTTT 59.737 38.462 20.73 0.00 44.01 2.83
7789 8552 0.317938 GTTCACAGCGTCACTCGACT 60.318 55.000 0.00 0.00 42.86 4.18
7825 8588 3.732219 GTCGTTCATCGTACAAGTCACAA 59.268 43.478 0.00 0.00 40.80 3.33
7858 8647 2.238942 ACAGACAGAACATGACGCAA 57.761 45.000 0.00 0.00 0.00 4.85
7862 8651 8.721478 ACATACAATTAACAGACAGAACATGAC 58.279 33.333 0.00 0.00 0.00 3.06
7864 8653 9.973246 GTACATACAATTAACAGACAGAACATG 57.027 33.333 0.00 0.00 0.00 3.21
7873 8662 9.772973 ACAAGACAAGTACATACAATTAACAGA 57.227 29.630 0.00 0.00 0.00 3.41
7890 8679 4.818546 ACAGATTCTGACCAACAAGACAAG 59.181 41.667 20.33 0.00 35.18 3.16
7893 8682 3.058639 GCACAGATTCTGACCAACAAGAC 60.059 47.826 20.33 0.00 35.18 3.01
7894 8683 3.141398 GCACAGATTCTGACCAACAAGA 58.859 45.455 20.33 0.00 35.18 3.02
7899 8688 3.264193 ACCATAGCACAGATTCTGACCAA 59.736 43.478 20.33 3.71 35.18 3.67
7917 8706 1.207791 CTAACAGGAGCCTCCACCAT 58.792 55.000 14.46 0.00 39.61 3.55
7934 8732 5.123227 CAAACCAGACTTCCACTCAAACTA 58.877 41.667 0.00 0.00 0.00 2.24
7999 8806 2.288825 CGACCAGTCAAAACTAGAGCCA 60.289 50.000 0.00 0.00 33.25 4.75
8070 8887 9.454859 AGAGAAGGACAAAATCTAATTAACCAG 57.545 33.333 0.00 0.00 0.00 4.00
8101 8918 4.381718 GCCCTCTTAAGAAAACGCTAGAGA 60.382 45.833 6.63 0.00 32.79 3.10
8102 8919 3.866327 GCCCTCTTAAGAAAACGCTAGAG 59.134 47.826 6.63 0.00 0.00 2.43
8117 8934 2.985847 GCAAACCGCTGCCCTCTT 60.986 61.111 0.00 0.00 36.25 2.85
8127 8944 0.860533 CCACAATGCAAAGCAAACCG 59.139 50.000 0.00 0.00 43.62 4.44
8129 8946 2.540931 CTGACCACAATGCAAAGCAAAC 59.459 45.455 0.00 0.00 43.62 2.93
8137 8954 1.134128 ACACTGTCTGACCACAATGCA 60.134 47.619 5.17 0.00 25.94 3.96
8143 8960 2.362397 TCAGAAGACACTGTCTGACCAC 59.638 50.000 12.59 3.23 44.12 4.16
8148 8965 5.398169 GTGTAGATCAGAAGACACTGTCTG 58.602 45.833 12.59 1.77 42.59 3.51
8149 8966 5.637006 GTGTAGATCAGAAGACACTGTCT 57.363 43.478 5.82 5.82 45.64 3.41
8154 8971 5.568685 TGCTAGTGTAGATCAGAAGACAC 57.431 43.478 0.00 1.40 42.01 3.67
8161 8978 4.305769 GGCATCTTGCTAGTGTAGATCAG 58.694 47.826 0.00 0.00 44.28 2.90
8171 8988 3.414272 GCACGGGCATCTTGCTAG 58.586 61.111 3.77 0.00 44.28 3.42
8181 8998 3.004326 TTCCATGCAATGCACGGGC 62.004 57.895 20.68 0.34 42.60 6.13
8182 8999 1.153784 GTTCCATGCAATGCACGGG 60.154 57.895 20.68 19.41 42.60 5.28
8183 9000 0.173935 ATGTTCCATGCAATGCACGG 59.826 50.000 14.89 14.89 43.82 4.94
8184 9001 1.135344 TGATGTTCCATGCAATGCACG 60.135 47.619 11.23 0.64 44.97 5.34
8185 9002 2.658373 TGATGTTCCATGCAATGCAC 57.342 45.000 11.23 0.00 44.97 4.57
8186 9003 2.826725 TCTTGATGTTCCATGCAATGCA 59.173 40.909 11.44 11.44 44.97 3.96
8187 9004 3.513680 TCTTGATGTTCCATGCAATGC 57.486 42.857 0.00 0.00 44.97 3.56
8188 9005 3.802139 GCATCTTGATGTTCCATGCAATG 59.198 43.478 11.61 0.00 46.21 2.82
8189 9006 3.449377 TGCATCTTGATGTTCCATGCAAT 59.551 39.130 11.61 0.00 45.22 3.56
8190 9007 2.826725 TGCATCTTGATGTTCCATGCAA 59.173 40.909 11.61 0.00 45.22 4.08
8191 9008 2.448453 TGCATCTTGATGTTCCATGCA 58.552 42.857 11.61 0.81 45.83 3.96
8192 9009 3.728076 ATGCATCTTGATGTTCCATGC 57.272 42.857 11.61 0.00 40.29 4.06
8193 9010 6.978343 AAAAATGCATCTTGATGTTCCATG 57.022 33.333 0.00 0.00 0.00 3.66
8215 9032 9.522804 GGTCAATCACAACAAGTATTTGTAAAA 57.477 29.630 3.82 0.00 46.54 1.52
8216 9033 8.138712 GGGTCAATCACAACAAGTATTTGTAAA 58.861 33.333 3.82 0.00 46.54 2.01
8217 9034 7.285629 TGGGTCAATCACAACAAGTATTTGTAA 59.714 33.333 3.82 0.00 46.54 2.41
8218 9035 6.773200 TGGGTCAATCACAACAAGTATTTGTA 59.227 34.615 3.82 0.00 46.54 2.41
8220 9037 6.083098 TGGGTCAATCACAACAAGTATTTG 57.917 37.500 0.00 0.00 40.24 2.32
8221 9038 6.690530 CATGGGTCAATCACAACAAGTATTT 58.309 36.000 0.00 0.00 31.12 1.40
8222 9039 5.336690 GCATGGGTCAATCACAACAAGTATT 60.337 40.000 0.00 0.00 31.12 1.89
8223 9040 4.158394 GCATGGGTCAATCACAACAAGTAT 59.842 41.667 0.00 0.00 31.12 2.12
8224 9041 3.505680 GCATGGGTCAATCACAACAAGTA 59.494 43.478 0.00 0.00 31.12 2.24
8225 9042 2.297033 GCATGGGTCAATCACAACAAGT 59.703 45.455 0.00 0.00 31.12 3.16
8226 9043 2.669113 CGCATGGGTCAATCACAACAAG 60.669 50.000 0.68 0.00 31.12 3.16
8227 9044 1.269174 CGCATGGGTCAATCACAACAA 59.731 47.619 0.68 0.00 31.12 2.83
8228 9045 0.880441 CGCATGGGTCAATCACAACA 59.120 50.000 0.68 0.00 31.12 3.33
8229 9046 0.171007 CCGCATGGGTCAATCACAAC 59.829 55.000 9.14 0.00 31.12 3.32
8230 9047 2.565647 CCGCATGGGTCAATCACAA 58.434 52.632 9.14 0.00 31.12 3.33
8231 9048 4.317359 CCGCATGGGTCAATCACA 57.683 55.556 9.14 0.00 0.00 3.58
8248 9065 8.570068 TTAGTTTTTACACATGGGATTACTCC 57.430 34.615 0.00 0.00 41.26 3.85
8250 9067 9.747898 TCATTAGTTTTTACACATGGGATTACT 57.252 29.630 0.00 0.12 0.00 2.24
8255 9072 9.693739 ACATATCATTAGTTTTTACACATGGGA 57.306 29.630 0.00 0.00 0.00 4.37
8256 9073 9.950680 GACATATCATTAGTTTTTACACATGGG 57.049 33.333 0.00 0.00 0.00 4.00
8257 9074 9.650371 CGACATATCATTAGTTTTTACACATGG 57.350 33.333 0.00 0.00 0.00 3.66
8260 9077 9.863845 TCTCGACATATCATTAGTTTTTACACA 57.136 29.630 0.00 0.00 0.00 3.72
8265 9082 9.319143 CTCCTTCTCGACATATCATTAGTTTTT 57.681 33.333 0.00 0.00 0.00 1.94
8266 9083 8.696374 TCTCCTTCTCGACATATCATTAGTTTT 58.304 33.333 0.00 0.00 0.00 2.43
8267 9084 8.239038 TCTCCTTCTCGACATATCATTAGTTT 57.761 34.615 0.00 0.00 0.00 2.66
8268 9085 7.825331 TCTCCTTCTCGACATATCATTAGTT 57.175 36.000 0.00 0.00 0.00 2.24
8269 9086 7.721842 TCTTCTCCTTCTCGACATATCATTAGT 59.278 37.037 0.00 0.00 0.00 2.24
8270 9087 8.105097 TCTTCTCCTTCTCGACATATCATTAG 57.895 38.462 0.00 0.00 0.00 1.73
8271 9088 7.939588 TCTCTTCTCCTTCTCGACATATCATTA 59.060 37.037 0.00 0.00 0.00 1.90
8272 9089 6.775142 TCTCTTCTCCTTCTCGACATATCATT 59.225 38.462 0.00 0.00 0.00 2.57
8273 9090 6.303054 TCTCTTCTCCTTCTCGACATATCAT 58.697 40.000 0.00 0.00 0.00 2.45
8274 9091 5.685728 TCTCTTCTCCTTCTCGACATATCA 58.314 41.667 0.00 0.00 0.00 2.15
8275 9092 6.817765 ATCTCTTCTCCTTCTCGACATATC 57.182 41.667 0.00 0.00 0.00 1.63
8276 9093 7.393234 CCTTATCTCTTCTCCTTCTCGACATAT 59.607 40.741 0.00 0.00 0.00 1.78
8277 9094 6.712998 CCTTATCTCTTCTCCTTCTCGACATA 59.287 42.308 0.00 0.00 0.00 2.29
8278 9095 5.534654 CCTTATCTCTTCTCCTTCTCGACAT 59.465 44.000 0.00 0.00 0.00 3.06
8279 9096 4.884744 CCTTATCTCTTCTCCTTCTCGACA 59.115 45.833 0.00 0.00 0.00 4.35
8280 9097 4.885325 ACCTTATCTCTTCTCCTTCTCGAC 59.115 45.833 0.00 0.00 0.00 4.20
8281 9098 4.884744 CACCTTATCTCTTCTCCTTCTCGA 59.115 45.833 0.00 0.00 0.00 4.04
8282 9099 4.884744 TCACCTTATCTCTTCTCCTTCTCG 59.115 45.833 0.00 0.00 0.00 4.04
8283 9100 5.301805 CCTCACCTTATCTCTTCTCCTTCTC 59.698 48.000 0.00 0.00 0.00 2.87
8284 9101 5.043732 TCCTCACCTTATCTCTTCTCCTTCT 60.044 44.000 0.00 0.00 0.00 2.85
8285 9102 5.205056 TCCTCACCTTATCTCTTCTCCTTC 58.795 45.833 0.00 0.00 0.00 3.46
8286 9103 5.208121 CTCCTCACCTTATCTCTTCTCCTT 58.792 45.833 0.00 0.00 0.00 3.36
8287 9104 4.231890 ACTCCTCACCTTATCTCTTCTCCT 59.768 45.833 0.00 0.00 0.00 3.69
8288 9105 4.340950 CACTCCTCACCTTATCTCTTCTCC 59.659 50.000 0.00 0.00 0.00 3.71
8289 9106 4.340950 CCACTCCTCACCTTATCTCTTCTC 59.659 50.000 0.00 0.00 0.00 2.87
8290 9107 4.285863 CCACTCCTCACCTTATCTCTTCT 58.714 47.826 0.00 0.00 0.00 2.85
8291 9108 3.386402 CCCACTCCTCACCTTATCTCTTC 59.614 52.174 0.00 0.00 0.00 2.87
8292 9109 3.379452 CCCACTCCTCACCTTATCTCTT 58.621 50.000 0.00 0.00 0.00 2.85
8293 9110 2.359781 CCCCACTCCTCACCTTATCTCT 60.360 54.545 0.00 0.00 0.00 3.10
8294 9111 2.043227 CCCCACTCCTCACCTTATCTC 58.957 57.143 0.00 0.00 0.00 2.75
8295 9112 1.366435 ACCCCACTCCTCACCTTATCT 59.634 52.381 0.00 0.00 0.00 1.98
8296 9113 1.486726 CACCCCACTCCTCACCTTATC 59.513 57.143 0.00 0.00 0.00 1.75
8297 9114 1.203440 ACACCCCACTCCTCACCTTAT 60.203 52.381 0.00 0.00 0.00 1.73
8298 9115 0.192566 ACACCCCACTCCTCACCTTA 59.807 55.000 0.00 0.00 0.00 2.69
8299 9116 1.073706 ACACCCCACTCCTCACCTT 60.074 57.895 0.00 0.00 0.00 3.50
8300 9117 1.843376 CACACCCCACTCCTCACCT 60.843 63.158 0.00 0.00 0.00 4.00
8301 9118 2.750350 CACACCCCACTCCTCACC 59.250 66.667 0.00 0.00 0.00 4.02
8302 9119 2.147387 ACCACACCCCACTCCTCAC 61.147 63.158 0.00 0.00 0.00 3.51
8303 9120 2.146724 CACCACACCCCACTCCTCA 61.147 63.158 0.00 0.00 0.00 3.86
8304 9121 2.750350 CACCACACCCCACTCCTC 59.250 66.667 0.00 0.00 0.00 3.71
8305 9122 2.854032 CCACCACACCCCACTCCT 60.854 66.667 0.00 0.00 0.00 3.69
8306 9123 3.175710 ACCACCACACCCCACTCC 61.176 66.667 0.00 0.00 0.00 3.85
8307 9124 2.113139 CACCACCACACCCCACTC 59.887 66.667 0.00 0.00 0.00 3.51
8308 9125 3.498071 CCACCACCACACCCCACT 61.498 66.667 0.00 0.00 0.00 4.00
8309 9126 3.816090 ACCACCACCACACCCCAC 61.816 66.667 0.00 0.00 0.00 4.61
8310 9127 3.814906 CACCACCACCACACCCCA 61.815 66.667 0.00 0.00 0.00 4.96
8311 9128 4.596585 CCACCACCACCACACCCC 62.597 72.222 0.00 0.00 0.00 4.95
8312 9129 3.816090 ACCACCACCACCACACCC 61.816 66.667 0.00 0.00 0.00 4.61
8313 9130 2.518349 CACCACCACCACCACACC 60.518 66.667 0.00 0.00 0.00 4.16
8314 9131 2.518349 CCACCACCACCACCACAC 60.518 66.667 0.00 0.00 0.00 3.82
8315 9132 2.617453 AACCACCACCACCACCACA 61.617 57.895 0.00 0.00 0.00 4.17
8316 9133 2.124693 CAACCACCACCACCACCAC 61.125 63.158 0.00 0.00 0.00 4.16
8317 9134 2.277072 CAACCACCACCACCACCA 59.723 61.111 0.00 0.00 0.00 4.17
8318 9135 2.520741 CCAACCACCACCACCACC 60.521 66.667 0.00 0.00 0.00 4.61
8319 9136 2.124693 CACCAACCACCACCACCAC 61.125 63.158 0.00 0.00 0.00 4.16
8320 9137 2.277072 CACCAACCACCACCACCA 59.723 61.111 0.00 0.00 0.00 4.17
8321 9138 2.520741 CCACCAACCACCACCACC 60.521 66.667 0.00 0.00 0.00 4.61
8322 9139 1.380650 AACCACCAACCACCACCAC 60.381 57.895 0.00 0.00 0.00 4.16
8323 9140 1.380515 CAACCACCAACCACCACCA 60.381 57.895 0.00 0.00 0.00 4.17
8324 9141 2.131067 CCAACCACCAACCACCACC 61.131 63.158 0.00 0.00 0.00 4.61
8325 9142 1.076632 TCCAACCACCAACCACCAC 60.077 57.895 0.00 0.00 0.00 4.16
8326 9143 1.076632 GTCCAACCACCAACCACCA 60.077 57.895 0.00 0.00 0.00 4.17
8327 9144 0.475044 TAGTCCAACCACCAACCACC 59.525 55.000 0.00 0.00 0.00 4.61
8328 9145 2.227194 CTTAGTCCAACCACCAACCAC 58.773 52.381 0.00 0.00 0.00 4.16
8329 9146 1.477923 GCTTAGTCCAACCACCAACCA 60.478 52.381 0.00 0.00 0.00 3.67
8330 9147 1.244816 GCTTAGTCCAACCACCAACC 58.755 55.000 0.00 0.00 0.00 3.77
8331 9148 0.872388 CGCTTAGTCCAACCACCAAC 59.128 55.000 0.00 0.00 0.00 3.77
8332 9149 0.250553 CCGCTTAGTCCAACCACCAA 60.251 55.000 0.00 0.00 0.00 3.67
8333 9150 1.122632 TCCGCTTAGTCCAACCACCA 61.123 55.000 0.00 0.00 0.00 4.17
8334 9151 0.391263 CTCCGCTTAGTCCAACCACC 60.391 60.000 0.00 0.00 0.00 4.61
8335 9152 0.391263 CCTCCGCTTAGTCCAACCAC 60.391 60.000 0.00 0.00 0.00 4.16
8336 9153 1.980052 CCTCCGCTTAGTCCAACCA 59.020 57.895 0.00 0.00 0.00 3.67
8337 9154 1.449778 GCCTCCGCTTAGTCCAACC 60.450 63.158 0.00 0.00 0.00 3.77
8338 9155 0.107654 ATGCCTCCGCTTAGTCCAAC 60.108 55.000 0.00 0.00 35.36 3.77
8339 9156 0.107703 CATGCCTCCGCTTAGTCCAA 60.108 55.000 0.00 0.00 35.36 3.53
8340 9157 0.975556 TCATGCCTCCGCTTAGTCCA 60.976 55.000 0.00 0.00 35.36 4.02
8341 9158 0.249657 CTCATGCCTCCGCTTAGTCC 60.250 60.000 0.00 0.00 35.36 3.85
8342 9159 0.249657 CCTCATGCCTCCGCTTAGTC 60.250 60.000 0.00 0.00 35.36 2.59
8343 9160 0.687757 TCCTCATGCCTCCGCTTAGT 60.688 55.000 0.00 0.00 35.36 2.24
8344 9161 0.683973 ATCCTCATGCCTCCGCTTAG 59.316 55.000 0.00 0.00 35.36 2.18
8345 9162 0.394192 CATCCTCATGCCTCCGCTTA 59.606 55.000 0.00 0.00 35.36 3.09
8346 9163 1.147824 CATCCTCATGCCTCCGCTT 59.852 57.895 0.00 0.00 35.36 4.68
8347 9164 2.815945 CCATCCTCATGCCTCCGCT 61.816 63.158 0.00 0.00 35.36 5.52
8348 9165 2.281345 CCATCCTCATGCCTCCGC 60.281 66.667 0.00 0.00 0.00 5.54
8349 9166 2.429058 CCCATCCTCATGCCTCCG 59.571 66.667 0.00 0.00 0.00 4.63
8350 9167 2.077842 ATGCCCATCCTCATGCCTCC 62.078 60.000 0.00 0.00 0.00 4.30
8351 9168 0.894184 CATGCCCATCCTCATGCCTC 60.894 60.000 0.00 0.00 34.44 4.70
8352 9169 1.153061 CATGCCCATCCTCATGCCT 59.847 57.895 0.00 0.00 34.44 4.75
8353 9170 1.906824 CCATGCCCATCCTCATGCC 60.907 63.158 0.00 0.00 38.89 4.40
8354 9171 0.894184 CTCCATGCCCATCCTCATGC 60.894 60.000 0.00 0.00 38.89 4.06
8355 9172 0.769247 TCTCCATGCCCATCCTCATG 59.231 55.000 0.00 0.00 39.67 3.07
8356 9173 1.354705 CATCTCCATGCCCATCCTCAT 59.645 52.381 0.00 0.00 0.00 2.90
8357 9174 0.769247 CATCTCCATGCCCATCCTCA 59.231 55.000 0.00 0.00 0.00 3.86
8358 9175 0.769873 ACATCTCCATGCCCATCCTC 59.230 55.000 0.00 0.00 32.57 3.71
8359 9176 0.769873 GACATCTCCATGCCCATCCT 59.230 55.000 0.00 0.00 32.57 3.24
8360 9177 0.475475 TGACATCTCCATGCCCATCC 59.525 55.000 0.00 0.00 32.57 3.51
8361 9178 1.419012 TCTGACATCTCCATGCCCATC 59.581 52.381 0.00 0.00 32.57 3.51
8362 9179 1.514983 TCTGACATCTCCATGCCCAT 58.485 50.000 0.00 0.00 32.57 4.00
8363 9180 1.514983 ATCTGACATCTCCATGCCCA 58.485 50.000 0.00 0.00 32.57 5.36
8364 9181 2.228059 CAATCTGACATCTCCATGCCC 58.772 52.381 0.00 0.00 32.57 5.36
8365 9182 2.928334 ACAATCTGACATCTCCATGCC 58.072 47.619 0.00 0.00 32.57 4.40
8366 9183 3.314635 GGAACAATCTGACATCTCCATGC 59.685 47.826 0.00 0.00 32.57 4.06
8367 9184 4.520179 TGGAACAATCTGACATCTCCATG 58.480 43.478 0.00 0.00 31.92 3.66
8368 9185 4.472470 TCTGGAACAATCTGACATCTCCAT 59.528 41.667 0.00 0.00 38.70 3.41
8369 9186 3.840078 TCTGGAACAATCTGACATCTCCA 59.160 43.478 0.00 0.00 38.70 3.86
8370 9187 4.161189 TCTCTGGAACAATCTGACATCTCC 59.839 45.833 0.00 0.00 38.70 3.71
8371 9188 5.105392 AGTCTCTGGAACAATCTGACATCTC 60.105 44.000 0.00 0.00 38.70 2.75
8372 9189 4.776837 AGTCTCTGGAACAATCTGACATCT 59.223 41.667 0.00 0.00 38.70 2.90
8373 9190 5.083533 AGTCTCTGGAACAATCTGACATC 57.916 43.478 0.00 0.00 38.70 3.06
8374 9191 5.486526 GAAGTCTCTGGAACAATCTGACAT 58.513 41.667 0.00 0.00 38.70 3.06
8375 9192 4.262635 GGAAGTCTCTGGAACAATCTGACA 60.263 45.833 0.00 0.00 38.70 3.58
8376 9193 4.020662 AGGAAGTCTCTGGAACAATCTGAC 60.021 45.833 0.00 0.00 38.70 3.51
8377 9194 4.020751 CAGGAAGTCTCTGGAACAATCTGA 60.021 45.833 0.00 0.00 38.70 3.27
8378 9195 4.252073 CAGGAAGTCTCTGGAACAATCTG 58.748 47.826 0.00 0.00 38.70 2.90
8379 9196 3.906846 ACAGGAAGTCTCTGGAACAATCT 59.093 43.478 0.00 0.00 38.70 2.40
8380 9197 4.278975 ACAGGAAGTCTCTGGAACAATC 57.721 45.455 0.00 0.00 38.70 2.67
8381 9198 4.713792 AACAGGAAGTCTCTGGAACAAT 57.286 40.909 0.00 0.00 38.70 2.71
8382 9199 4.503714 AAACAGGAAGTCTCTGGAACAA 57.496 40.909 0.00 0.00 38.70 2.83
8383 9200 4.503714 AAAACAGGAAGTCTCTGGAACA 57.496 40.909 0.00 0.00 36.62 3.18
8384 9201 7.363431 CAATTAAAACAGGAAGTCTCTGGAAC 58.637 38.462 0.00 0.00 36.62 3.62
8385 9202 6.016276 GCAATTAAAACAGGAAGTCTCTGGAA 60.016 38.462 0.00 0.00 36.62 3.53
8386 9203 5.473504 GCAATTAAAACAGGAAGTCTCTGGA 59.526 40.000 0.00 0.00 36.62 3.86
8387 9204 5.474876 AGCAATTAAAACAGGAAGTCTCTGG 59.525 40.000 0.00 0.00 36.62 3.86
8388 9205 6.205464 TGAGCAATTAAAACAGGAAGTCTCTG 59.795 38.462 0.00 0.00 38.16 3.35
8389 9206 6.299141 TGAGCAATTAAAACAGGAAGTCTCT 58.701 36.000 0.00 0.00 0.00 3.10
8390 9207 6.560253 TGAGCAATTAAAACAGGAAGTCTC 57.440 37.500 0.00 0.00 0.00 3.36
8391 9208 6.321181 TGTTGAGCAATTAAAACAGGAAGTCT 59.679 34.615 0.00 0.00 0.00 3.24
8392 9209 6.503524 TGTTGAGCAATTAAAACAGGAAGTC 58.496 36.000 0.00 0.00 0.00 3.01
8393 9210 6.463995 TGTTGAGCAATTAAAACAGGAAGT 57.536 33.333 0.00 0.00 0.00 3.01
8394 9211 7.652909 TCATTGTTGAGCAATTAAAACAGGAAG 59.347 33.333 0.00 0.00 44.82 3.46
8395 9212 7.495901 TCATTGTTGAGCAATTAAAACAGGAA 58.504 30.769 0.00 0.00 44.82 3.36
8396 9213 7.048629 TCATTGTTGAGCAATTAAAACAGGA 57.951 32.000 0.00 0.00 44.82 3.86
8397 9214 7.439056 ACTTCATTGTTGAGCAATTAAAACAGG 59.561 33.333 0.00 0.00 44.82 4.00
8398 9215 8.356533 ACTTCATTGTTGAGCAATTAAAACAG 57.643 30.769 0.00 0.00 44.82 3.16
8399 9216 8.715191 AACTTCATTGTTGAGCAATTAAAACA 57.285 26.923 0.00 0.00 44.82 2.83
8415 9232 5.102953 TCCTATCTCCCACAACTTCATTG 57.897 43.478 0.00 0.00 44.60 2.82
8416 9233 5.429762 TCATCCTATCTCCCACAACTTCATT 59.570 40.000 0.00 0.00 0.00 2.57
8417 9234 4.971282 TCATCCTATCTCCCACAACTTCAT 59.029 41.667 0.00 0.00 0.00 2.57
8418 9235 4.361783 TCATCCTATCTCCCACAACTTCA 58.638 43.478 0.00 0.00 0.00 3.02
8419 9236 5.119694 GTTCATCCTATCTCCCACAACTTC 58.880 45.833 0.00 0.00 0.00 3.01
8420 9237 4.383118 CGTTCATCCTATCTCCCACAACTT 60.383 45.833 0.00 0.00 0.00 2.66
8421 9238 3.133003 CGTTCATCCTATCTCCCACAACT 59.867 47.826 0.00 0.00 0.00 3.16
8422 9239 3.132289 TCGTTCATCCTATCTCCCACAAC 59.868 47.826 0.00 0.00 0.00 3.32
8423 9240 3.371034 TCGTTCATCCTATCTCCCACAA 58.629 45.455 0.00 0.00 0.00 3.33
8424 9241 2.959030 CTCGTTCATCCTATCTCCCACA 59.041 50.000 0.00 0.00 0.00 4.17
8425 9242 3.223435 TCTCGTTCATCCTATCTCCCAC 58.777 50.000 0.00 0.00 0.00 4.61
8426 9243 3.138468 TCTCTCGTTCATCCTATCTCCCA 59.862 47.826 0.00 0.00 0.00 4.37
8427 9244 3.757270 TCTCTCGTTCATCCTATCTCCC 58.243 50.000 0.00 0.00 0.00 4.30
8428 9245 4.217550 CCTTCTCTCGTTCATCCTATCTCC 59.782 50.000 0.00 0.00 0.00 3.71
8429 9246 4.320935 GCCTTCTCTCGTTCATCCTATCTC 60.321 50.000 0.00 0.00 0.00 2.75
8430 9247 3.572255 GCCTTCTCTCGTTCATCCTATCT 59.428 47.826 0.00 0.00 0.00 1.98
8431 9248 3.305744 GGCCTTCTCTCGTTCATCCTATC 60.306 52.174 0.00 0.00 0.00 2.08
8432 9249 2.630580 GGCCTTCTCTCGTTCATCCTAT 59.369 50.000 0.00 0.00 0.00 2.57
8433 9250 2.032620 GGCCTTCTCTCGTTCATCCTA 58.967 52.381 0.00 0.00 0.00 2.94
8434 9251 0.827368 GGCCTTCTCTCGTTCATCCT 59.173 55.000 0.00 0.00 0.00 3.24
8435 9252 0.827368 AGGCCTTCTCTCGTTCATCC 59.173 55.000 0.00 0.00 0.00 3.51
8436 9253 2.682155 AAGGCCTTCTCTCGTTCATC 57.318 50.000 13.78 0.00 0.00 2.92
8437 9254 3.964031 AGATAAGGCCTTCTCTCGTTCAT 59.036 43.478 24.49 6.25 0.00 2.57
8438 9255 3.131223 CAGATAAGGCCTTCTCTCGTTCA 59.869 47.826 26.17 5.87 0.00 3.18
8439 9256 3.712187 CAGATAAGGCCTTCTCTCGTTC 58.288 50.000 26.17 11.85 0.00 3.95
8440 9257 2.159028 GCAGATAAGGCCTTCTCTCGTT 60.159 50.000 26.17 7.37 0.00 3.85
8441 9258 1.410882 GCAGATAAGGCCTTCTCTCGT 59.589 52.381 26.17 7.71 0.00 4.18
8442 9259 1.410517 TGCAGATAAGGCCTTCTCTCG 59.589 52.381 26.17 21.46 0.00 4.04
8443 9260 3.550437 TTGCAGATAAGGCCTTCTCTC 57.450 47.619 26.17 20.60 0.00 3.20
8444 9261 4.205587 CATTTGCAGATAAGGCCTTCTCT 58.794 43.478 24.49 24.19 0.00 3.10
8445 9262 3.950395 ACATTTGCAGATAAGGCCTTCTC 59.050 43.478 24.49 22.13 0.00 2.87
8446 9263 3.698040 CACATTTGCAGATAAGGCCTTCT 59.302 43.478 24.49 13.31 0.00 2.85
8447 9264 3.696051 TCACATTTGCAGATAAGGCCTTC 59.304 43.478 24.49 9.18 0.00 3.46
8448 9265 3.700538 TCACATTTGCAGATAAGGCCTT 58.299 40.909 24.18 24.18 0.00 4.35
8449 9266 3.370840 TCACATTTGCAGATAAGGCCT 57.629 42.857 0.00 0.00 0.00 5.19
8450 9267 3.696051 TCTTCACATTTGCAGATAAGGCC 59.304 43.478 0.00 0.00 0.00 5.19
8451 9268 4.637534 TCTCTTCACATTTGCAGATAAGGC 59.362 41.667 0.00 0.00 0.00 4.35
8452 9269 6.373774 ACTTCTCTTCACATTTGCAGATAAGG 59.626 38.462 10.02 0.00 35.12 2.69
8453 9270 7.094890 ACACTTCTCTTCACATTTGCAGATAAG 60.095 37.037 5.51 5.51 36.16 1.73
8454 9271 6.712095 ACACTTCTCTTCACATTTGCAGATAA 59.288 34.615 0.00 0.00 0.00 1.75
8455 9272 6.148315 CACACTTCTCTTCACATTTGCAGATA 59.852 38.462 0.00 0.00 0.00 1.98
8456 9273 5.048921 CACACTTCTCTTCACATTTGCAGAT 60.049 40.000 0.00 0.00 0.00 2.90
8457 9274 4.274214 CACACTTCTCTTCACATTTGCAGA 59.726 41.667 0.00 0.00 0.00 4.26
8458 9275 4.534168 CACACTTCTCTTCACATTTGCAG 58.466 43.478 0.00 0.00 0.00 4.41
8459 9276 3.316029 CCACACTTCTCTTCACATTTGCA 59.684 43.478 0.00 0.00 0.00 4.08
8460 9277 3.304928 CCCACACTTCTCTTCACATTTGC 60.305 47.826 0.00 0.00 0.00 3.68
8461 9278 3.885297 ACCCACACTTCTCTTCACATTTG 59.115 43.478 0.00 0.00 0.00 2.32
8462 9279 4.170468 ACCCACACTTCTCTTCACATTT 57.830 40.909 0.00 0.00 0.00 2.32
8463 9280 3.864789 ACCCACACTTCTCTTCACATT 57.135 42.857 0.00 0.00 0.00 2.71
8464 9281 5.505181 AATACCCACACTTCTCTTCACAT 57.495 39.130 0.00 0.00 0.00 3.21
8465 9282 4.974645 AATACCCACACTTCTCTTCACA 57.025 40.909 0.00 0.00 0.00 3.58
8466 9283 5.552178 AGAAATACCCACACTTCTCTTCAC 58.448 41.667 0.00 0.00 0.00 3.18
8467 9284 5.825593 AGAAATACCCACACTTCTCTTCA 57.174 39.130 0.00 0.00 0.00 3.02
8468 9285 6.486993 ACAAAGAAATACCCACACTTCTCTTC 59.513 38.462 0.00 0.00 0.00 2.87
8469 9286 6.365520 ACAAAGAAATACCCACACTTCTCTT 58.634 36.000 0.00 0.00 0.00 2.85
8470 9287 5.941788 ACAAAGAAATACCCACACTTCTCT 58.058 37.500 0.00 0.00 0.00 3.10
8471 9288 7.739498 TTACAAAGAAATACCCACACTTCTC 57.261 36.000 0.00 0.00 0.00 2.87
8472 9289 8.528044 TTTTACAAAGAAATACCCACACTTCT 57.472 30.769 0.00 0.00 0.00 2.85
8473 9290 9.758651 AATTTTACAAAGAAATACCCACACTTC 57.241 29.630 0.00 0.00 0.00 3.01
8474 9291 9.541143 CAATTTTACAAAGAAATACCCACACTT 57.459 29.630 0.00 0.00 0.00 3.16
8475 9292 7.655732 GCAATTTTACAAAGAAATACCCACACT 59.344 33.333 0.00 0.00 0.00 3.55
8476 9293 7.095397 GGCAATTTTACAAAGAAATACCCACAC 60.095 37.037 0.00 0.00 0.00 3.82
8477 9294 6.931840 GGCAATTTTACAAAGAAATACCCACA 59.068 34.615 0.00 0.00 0.00 4.17
8478 9295 6.931840 TGGCAATTTTACAAAGAAATACCCAC 59.068 34.615 0.00 0.00 29.41 4.61
8479 9296 7.067496 TGGCAATTTTACAAAGAAATACCCA 57.933 32.000 0.00 0.00 30.70 4.51
8480 9297 9.313118 CTATGGCAATTTTACAAAGAAATACCC 57.687 33.333 0.00 0.00 0.00 3.69
8481 9298 9.869757 ACTATGGCAATTTTACAAAGAAATACC 57.130 29.630 0.00 0.00 0.00 2.73
8495 9312 8.567948 CGGATAGAAAACATACTATGGCAATTT 58.432 33.333 0.00 0.00 30.74 1.82
8496 9313 7.719633 ACGGATAGAAAACATACTATGGCAATT 59.280 33.333 0.00 0.00 30.74 2.32
8497 9314 7.224297 ACGGATAGAAAACATACTATGGCAAT 58.776 34.615 0.00 0.00 30.74 3.56
8498 9315 6.588204 ACGGATAGAAAACATACTATGGCAA 58.412 36.000 0.00 0.00 30.74 4.52
8499 9316 6.169557 ACGGATAGAAAACATACTATGGCA 57.830 37.500 0.00 0.00 30.74 4.92
8500 9317 6.220930 TGACGGATAGAAAACATACTATGGC 58.779 40.000 1.11 0.00 30.74 4.40
8501 9318 7.658261 TCTGACGGATAGAAAACATACTATGG 58.342 38.462 1.11 0.00 30.74 2.74
8509 9326 9.297037 TGATCTATATCTGACGGATAGAAAACA 57.703 33.333 9.78 5.12 39.89 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.