Multiple sequence alignment - TraesCS6A01G278500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G278500 chr6A 100.000 3621 0 0 1 3621 506398338 506401958 0.000000e+00 6687.0
1 TraesCS6A01G278500 chr6A 82.857 210 30 2 3223 3432 103300146 103299943 2.220000e-42 183.0
2 TraesCS6A01G278500 chr6A 91.667 108 9 0 3020 3127 431992356 431992249 2.250000e-32 150.0
3 TraesCS6A01G278500 chr6A 100.000 29 0 0 2131 2159 172114745 172114717 2.000000e-03 54.7
4 TraesCS6A01G278500 chr6B 90.372 1776 114 18 112 1842 550200685 550202448 0.000000e+00 2279.0
5 TraesCS6A01G278500 chr6B 91.139 474 34 4 1852 2319 550202499 550202970 1.420000e-178 636.0
6 TraesCS6A01G278500 chr6B 95.166 331 15 1 2305 2634 550209267 550209597 4.140000e-144 521.0
7 TraesCS6A01G278500 chr6B 91.698 265 16 4 2621 2883 550209620 550209880 2.660000e-96 363.0
8 TraesCS6A01G278500 chr6B 94.186 86 3 2 2928 3011 550210203 550210288 2.930000e-26 130.0
9 TraesCS6A01G278500 chr6D 95.411 1046 44 2 799 1840 365441327 365442372 0.000000e+00 1663.0
10 TraesCS6A01G278500 chr6D 90.723 830 60 9 1 815 365440488 365441315 0.000000e+00 1090.0
11 TraesCS6A01G278500 chr6D 91.484 411 26 3 2335 2744 365445972 365446374 1.140000e-154 556.0
12 TraesCS6A01G278500 chr6D 94.012 167 10 0 2161 2327 365442779 365442945 1.670000e-63 254.0
13 TraesCS6A01G278500 chr6D 90.698 129 6 3 2884 3011 365446419 365446542 2.240000e-37 167.0
14 TraesCS6A01G278500 chr6D 93.137 102 7 0 3126 3227 365446540 365446641 2.250000e-32 150.0
15 TraesCS6A01G278500 chr6D 81.915 94 12 4 461 552 365441165 365441255 1.390000e-09 75.0
16 TraesCS6A01G278500 chr7A 89.273 839 88 2 1004 1841 164789628 164788791 0.000000e+00 1050.0
17 TraesCS6A01G278500 chr7A 85.366 369 42 5 2303 2665 164786265 164785903 4.420000e-99 372.0
18 TraesCS6A01G278500 chr7B 89.307 823 88 0 1020 1842 125769736 125768914 0.000000e+00 1033.0
19 TraesCS6A01G278500 chr7B 85.556 360 45 1 2354 2713 125766564 125766212 1.590000e-98 370.0
20 TraesCS6A01G278500 chr7B 84.878 205 28 3 3230 3432 426092608 426092405 1.700000e-48 204.0
21 TraesCS6A01G278500 chr7B 85.000 80 7 4 2008 2084 706362096 706362019 3.880000e-10 76.8
22 TraesCS6A01G278500 chr7D 89.186 823 89 0 1020 1842 163568166 163567344 0.000000e+00 1027.0
23 TraesCS6A01G278500 chr7D 83.059 425 40 18 3227 3621 511988130 511988552 1.240000e-94 357.0
24 TraesCS6A01G278500 chr7D 84.401 359 46 6 2303 2655 163562923 163562569 9.630000e-91 344.0
25 TraesCS6A01G278500 chr7D 93.143 175 10 2 3438 3612 82868729 82868901 4.640000e-64 255.0
26 TraesCS6A01G278500 chr7D 88.095 84 9 1 1996 2079 246807763 246807845 8.270000e-17 99.0
27 TraesCS6A01G278500 chr7D 84.286 70 6 5 1057 1123 184937467 184937400 3.020000e-06 63.9
28 TraesCS6A01G278500 chr2D 83.654 416 44 9 3227 3621 612613751 612613339 1.590000e-98 370.0
29 TraesCS6A01G278500 chr2D 93.956 182 10 1 3440 3621 422518309 422518489 1.280000e-69 274.0
30 TraesCS6A01G278500 chr2D 90.291 206 19 1 3228 3432 442131722 442131927 5.960000e-68 268.0
31 TraesCS6A01G278500 chr2D 91.209 182 15 1 3440 3621 131364752 131364572 2.790000e-61 246.0
32 TraesCS6A01G278500 chr2D 81.928 83 12 3 2006 2087 606624553 606624633 2.330000e-07 67.6
33 TraesCS6A01G278500 chr2D 100.000 30 0 0 2131 2160 380407759 380407730 5.050000e-04 56.5
34 TraesCS6A01G278500 chr2D 100.000 28 0 0 2129 2156 38208916 38208889 7.000000e-03 52.8
35 TraesCS6A01G278500 chr5A 82.949 434 35 19 3227 3621 25879512 25879079 4.450000e-94 355.0
36 TraesCS6A01G278500 chr5A 90.000 120 11 1 3020 3138 570510598 570510479 1.740000e-33 154.0
37 TraesCS6A01G278500 chr5A 90.991 111 9 1 3017 3127 388572503 388572612 8.100000e-32 148.0
38 TraesCS6A01G278500 chr4D 82.641 409 47 16 3227 3612 391041170 391041577 1.250000e-89 340.0
39 TraesCS6A01G278500 chr4D 86.058 208 25 4 3227 3432 391023038 391023243 1.690000e-53 220.0
40 TraesCS6A01G278500 chr4D 88.571 70 7 1 1076 1145 120449572 120449640 2.320000e-12 84.2
41 TraesCS6A01G278500 chr3D 93.407 182 11 1 3440 3621 576256409 576256229 5.960000e-68 268.0
42 TraesCS6A01G278500 chr3D 92.391 184 13 1 3438 3621 391255753 391255571 9.970000e-66 261.0
43 TraesCS6A01G278500 chr3D 88.235 221 18 8 3227 3443 308819781 308819997 1.290000e-64 257.0
44 TraesCS6A01G278500 chr3D 87.685 203 24 1 3221 3423 152563965 152564166 6.040000e-58 235.0
45 TraesCS6A01G278500 chr3D 93.578 109 7 0 3020 3128 574860699 574860807 2.890000e-36 163.0
46 TraesCS6A01G278500 chr1D 88.038 209 21 4 3227 3432 29573598 29573805 1.000000e-60 244.0
47 TraesCS6A01G278500 chr5D 88.945 199 16 5 3425 3621 305195452 305195258 1.300000e-59 241.0
48 TraesCS6A01G278500 chr5D 97.561 41 1 0 2630 2670 8939740 8939700 1.800000e-08 71.3
49 TraesCS6A01G278500 chr5D 84.848 66 9 1 1999 2064 536383379 536383443 8.390000e-07 65.8
50 TraesCS6A01G278500 chr1B 87.192 203 23 2 3242 3443 431030871 431031071 1.010000e-55 228.0
51 TraesCS6A01G278500 chr4B 90.598 117 11 0 3018 3134 565865964 565865848 4.840000e-34 156.0
52 TraesCS6A01G278500 chr4B 80.645 93 16 2 1995 2086 660097151 660097242 1.800000e-08 71.3
53 TraesCS6A01G278500 chr4A 91.228 114 9 1 3015 3127 594217982 594217869 1.740000e-33 154.0
54 TraesCS6A01G278500 chr4A 90.351 114 11 0 3017 3130 366478636 366478523 2.250000e-32 150.0
55 TraesCS6A01G278500 chr4A 100.000 28 0 0 2133 2160 594284485 594284512 7.000000e-03 52.8
56 TraesCS6A01G278500 chr3B 87.500 128 13 3 3012 3138 92927861 92927986 1.050000e-30 145.0
57 TraesCS6A01G278500 chr3A 87.500 128 13 3 3019 3145 584767338 584767463 1.050000e-30 145.0
58 TraesCS6A01G278500 chr2B 91.304 46 4 0 2115 2160 406085494 406085539 3.020000e-06 63.9
59 TraesCS6A01G278500 chr2B 100.000 30 0 0 2131 2160 169856237 169856208 5.050000e-04 56.5
60 TraesCS6A01G278500 chr2B 100.000 30 0 0 2131 2160 451818365 451818336 5.050000e-04 56.5
61 TraesCS6A01G278500 chr2B 100.000 30 0 0 2131 2160 758596267 758596296 5.050000e-04 56.5
62 TraesCS6A01G278500 chr1A 84.615 52 8 0 2000 2051 449471695 449471746 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G278500 chr6A 506398338 506401958 3620 False 6687.0 6687 100.000000 1 3621 1 chr6A.!!$F1 3620
1 TraesCS6A01G278500 chr6B 550200685 550202970 2285 False 1457.5 2279 90.755500 112 2319 2 chr6B.!!$F1 2207
2 TraesCS6A01G278500 chr6B 550209267 550210288 1021 False 338.0 521 93.683333 2305 3011 3 chr6B.!!$F2 706
3 TraesCS6A01G278500 chr6D 365440488 365446641 6153 False 565.0 1663 91.054286 1 3227 7 chr6D.!!$F1 3226
4 TraesCS6A01G278500 chr7A 164785903 164789628 3725 True 711.0 1050 87.319500 1004 2665 2 chr7A.!!$R1 1661
5 TraesCS6A01G278500 chr7B 125766212 125769736 3524 True 701.5 1033 87.431500 1020 2713 2 chr7B.!!$R3 1693
6 TraesCS6A01G278500 chr7D 163567344 163568166 822 True 1027.0 1027 89.186000 1020 1842 1 chr7D.!!$R2 822

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.034863 TTTGCCGGTGGTCCCTAATC 60.035 55.0 1.90 0.00 0.0 1.75 F
777 791 0.674895 AGTTGCATCAGAAGGCCGTC 60.675 55.0 11.15 11.15 0.0 4.79 F
1145 1214 0.253160 AACCCCTATGCCTCAGTCCA 60.253 55.0 0.00 0.00 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1126 1195 0.253160 TGGACTGAGGCATAGGGGTT 60.253 55.0 0.00 0.00 0.00 4.11 R
2549 7949 0.471780 AAGGCCCCCAAAAACTCAGG 60.472 55.0 0.00 0.00 0.00 3.86 R
2908 8508 0.110486 TTTCTCAGGCCAGTTGGTCC 59.890 55.0 5.01 1.58 41.83 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.034863 TTTGCCGGTGGTCCCTAATC 60.035 55.000 1.90 0.00 0.00 1.75
49 50 5.050091 CGGCTTGATGGTATATGTTTCACTC 60.050 44.000 0.00 0.00 0.00 3.51
60 61 7.973944 GGTATATGTTTCACTCATTTTGTTCCC 59.026 37.037 0.00 0.00 0.00 3.97
61 62 5.867903 ATGTTTCACTCATTTTGTTCCCA 57.132 34.783 0.00 0.00 0.00 4.37
62 63 5.667539 TGTTTCACTCATTTTGTTCCCAA 57.332 34.783 0.00 0.00 0.00 4.12
72 73 7.893302 ACTCATTTTGTTCCCAACCTATTCATA 59.107 33.333 0.00 0.00 0.00 2.15
82 83 8.079211 TCCCAACCTATTCATAGTAGATATGC 57.921 38.462 0.00 0.00 41.04 3.14
105 106 3.511146 ACATTGGGTTGGATTGATCACAC 59.489 43.478 0.00 0.00 0.00 3.82
110 111 2.584791 GTTGGATTGATCACACGTTGC 58.415 47.619 0.00 0.00 0.00 4.17
115 116 4.699735 TGGATTGATCACACGTTGCTTATT 59.300 37.500 0.00 0.00 0.00 1.40
117 118 3.469899 TGATCACACGTTGCTTATTGC 57.530 42.857 0.00 0.00 43.25 3.56
138 139 2.487086 CCGATCCATTTCCACCTATGCA 60.487 50.000 0.00 0.00 0.00 3.96
156 157 2.557924 TGCATCATCTGTTTGTGGAACC 59.442 45.455 0.00 0.00 37.45 3.62
227 238 4.730966 TGGTACTTTTGGATTTACTGCCA 58.269 39.130 0.00 0.00 0.00 4.92
251 262 2.500504 ACTCTTCCTATTGGGTTCGTCC 59.499 50.000 0.00 0.00 36.25 4.79
263 274 2.029560 GGGTTCGTCCGTACTTTCTTCT 60.030 50.000 0.00 0.00 37.00 2.85
308 319 1.003866 GCTTACAAATTAGGCGGCGAG 60.004 52.381 12.98 0.00 0.00 5.03
449 460 1.444933 TTTGAGCCCCTCTTTCCTCA 58.555 50.000 0.00 0.00 32.90 3.86
486 497 6.388100 TCTCTCTGGATTTGGATACCATTTCT 59.612 38.462 0.00 0.00 31.53 2.52
498 509 7.282585 TGGATACCATTTCTGAATTTCGATCT 58.717 34.615 0.00 0.00 0.00 2.75
583 595 6.887626 TTGGTCTACTTGGTTTTGGATAAC 57.112 37.500 0.00 0.00 0.00 1.89
649 661 6.222389 TCTTATGGGTTCTTTGCATTGTTTG 58.778 36.000 0.00 0.00 0.00 2.93
686 698 5.658190 CCATTGTCTCCTTGGTTTTGGATAT 59.342 40.000 0.00 0.00 0.00 1.63
711 723 2.280628 ACCATTTTCGATCCTCTTCGC 58.719 47.619 0.00 0.00 38.97 4.70
776 790 0.957395 CAGTTGCATCAGAAGGCCGT 60.957 55.000 0.00 0.00 0.00 5.68
777 791 0.674895 AGTTGCATCAGAAGGCCGTC 60.675 55.000 11.15 11.15 0.00 4.79
815 863 3.053831 TGGAGAAAAGAAGGCCGTAAG 57.946 47.619 0.00 0.00 0.00 2.34
829 877 2.544069 GCCGTAAGTGGATAGTCTCTGC 60.544 54.545 0.00 0.00 0.00 4.26
833 881 3.902881 AAGTGGATAGTCTCTGCTTGG 57.097 47.619 0.00 0.00 0.00 3.61
845 893 2.207501 CTGCTTGGTCTCTGGCCCAT 62.208 60.000 0.00 0.00 0.00 4.00
914 962 1.888436 TAGGGGCACGTCAGCTTCAG 61.888 60.000 0.00 0.00 34.17 3.02
950 998 2.028337 GATCCCGCTTCTCGCCTC 59.972 66.667 0.00 0.00 36.73 4.70
1126 1195 1.802337 CGACCTCTTCGTCCACACCA 61.802 60.000 0.00 0.00 43.24 4.17
1140 1209 0.844661 ACACCAACCCCTATGCCTCA 60.845 55.000 0.00 0.00 0.00 3.86
1145 1214 0.253160 AACCCCTATGCCTCAGTCCA 60.253 55.000 0.00 0.00 0.00 4.02
1409 1478 1.168407 TCGAACGTCGACCTGTTCCT 61.168 55.000 22.53 0.00 44.82 3.36
1563 1632 2.125391 GTGATGGCGCTGCTCTCA 60.125 61.111 7.64 0.00 0.00 3.27
1614 1683 2.283529 GGAGACCTCGTGCCTGGAA 61.284 63.158 0.00 0.00 0.00 3.53
1787 1856 1.374758 GCTTCTGGGTGGACGTGAG 60.375 63.158 0.00 0.00 0.00 3.51
1845 1914 4.322080 CCTCTTGCAGGTATAATGTCGA 57.678 45.455 0.00 0.00 37.53 4.20
1846 1915 4.302455 CCTCTTGCAGGTATAATGTCGAG 58.698 47.826 0.00 0.00 37.53 4.04
1847 1916 4.302455 CTCTTGCAGGTATAATGTCGAGG 58.698 47.826 0.00 0.00 0.00 4.63
1849 1918 2.673258 TGCAGGTATAATGTCGAGGGA 58.327 47.619 0.00 0.00 0.00 4.20
1850 1919 3.239449 TGCAGGTATAATGTCGAGGGAT 58.761 45.455 0.00 0.00 0.00 3.85
1928 2047 6.238953 CCAATTCAGCTCAATCTGATTTAGGG 60.239 42.308 12.20 0.00 42.12 3.53
1949 3779 3.610911 GACAGGAGGACAAATACTTGGG 58.389 50.000 0.00 0.00 36.82 4.12
2020 3851 7.041440 TCAGAAATGCTAAAAATCTGACGTTGA 60.041 33.333 0.00 0.00 41.01 3.18
2055 3886 5.453648 TGGTAAATCGAACGTTTTTCATGG 58.546 37.500 0.46 0.00 0.00 3.66
2068 3899 6.703607 ACGTTTTTCATGGCAATTTATGTTGA 59.296 30.769 0.00 0.00 0.00 3.18
2071 3902 5.384063 TTCATGGCAATTTATGTTGACGT 57.616 34.783 0.00 0.00 40.06 4.34
2107 3938 5.033589 TGAACCCATTGCTTGAATTTTGT 57.966 34.783 0.00 0.00 0.00 2.83
2125 3956 9.107367 GAATTTTGTTACTTTCTTCGTCTCATG 57.893 33.333 0.00 0.00 0.00 3.07
2127 3958 8.651391 TTTTGTTACTTTCTTCGTCTCATGTA 57.349 30.769 0.00 0.00 0.00 2.29
2157 3988 4.672862 CGCTCAAACAGATGTATCTAGACG 59.327 45.833 0.00 0.00 34.85 4.18
2158 3989 5.583495 GCTCAAACAGATGTATCTAGACGT 58.417 41.667 0.00 0.00 34.85 4.34
2163 3994 4.953667 ACAGATGTATCTAGACGTACGGA 58.046 43.478 21.06 7.34 34.85 4.69
2187 4064 2.325761 AGTACTTTACAGCTCAACGCG 58.674 47.619 3.53 3.53 45.59 6.01
2226 4103 6.550938 TCACTTGAGTTGGATATGATGTCT 57.449 37.500 0.00 0.00 0.00 3.41
2299 4679 9.645128 TCAGGATCACATTAATAATGGATTTGT 57.355 29.630 16.36 0.00 43.21 2.83
2420 7820 1.340017 ACAGGGTGGTGATGAATTCGG 60.340 52.381 0.04 0.00 0.00 4.30
2441 7841 3.997681 GGGTGAAGAAGCTAGAGTTTCAC 59.002 47.826 15.59 15.59 44.13 3.18
2494 7894 3.096092 GGAATCAGTTTTGTATGGGCCA 58.904 45.455 9.61 9.61 0.00 5.36
2619 8019 4.811024 TCTACTTGAGCACTTCAAACTGTG 59.189 41.667 0.00 0.00 44.84 3.66
2634 8069 4.410492 AACTGTGAGATGAATCAAACGC 57.590 40.909 0.00 0.00 0.00 4.84
2670 8105 6.313411 TGTTTAAGCTTGTGTACGTGTAAGTT 59.687 34.615 9.86 0.00 0.00 2.66
2672 8107 5.806366 AAGCTTGTGTACGTGTAAGTTTT 57.194 34.783 0.00 0.00 0.00 2.43
2714 8149 2.303890 TGCCAGTGATGTTCTGTGAGAT 59.696 45.455 0.00 0.00 0.00 2.75
2724 8159 3.064207 GTTCTGTGAGATTGCGGTACAA 58.936 45.455 0.00 0.00 44.01 2.41
2747 8183 7.829211 ACAATTATTCTACCTTACACAGTGCAT 59.171 33.333 0.00 0.00 0.00 3.96
2754 8190 3.007940 ACCTTACACAGTGCATGCTTCTA 59.992 43.478 20.33 0.00 0.00 2.10
2778 8214 9.388506 CTATCTGTTTCATTGTTTCTCCATAGT 57.611 33.333 0.00 0.00 0.00 2.12
2780 8216 6.368791 TCTGTTTCATTGTTTCTCCATAGTCG 59.631 38.462 0.00 0.00 0.00 4.18
2781 8217 5.995282 TGTTTCATTGTTTCTCCATAGTCGT 59.005 36.000 0.00 0.00 0.00 4.34
2782 8218 7.156000 TGTTTCATTGTTTCTCCATAGTCGTA 58.844 34.615 0.00 0.00 0.00 3.43
2854 8290 8.929827 CATGTTTCAGGCATGTAATTATCAAA 57.070 30.769 0.00 0.00 38.96 2.69
2883 8320 8.630054 ACCAAAATGTACACTGTATGTTGTAT 57.370 30.769 0.00 0.00 43.19 2.29
2884 8321 9.727859 ACCAAAATGTACACTGTATGTTGTATA 57.272 29.630 0.00 0.00 43.19 1.47
2908 8508 2.391616 TTCTGCAGCTACCATCACTG 57.608 50.000 9.47 0.00 34.48 3.66
2936 8653 3.245052 ACTGGCCTGAGAAAGTTTGCTAT 60.245 43.478 17.64 0.00 0.00 2.97
2937 8654 4.019321 ACTGGCCTGAGAAAGTTTGCTATA 60.019 41.667 17.64 0.00 0.00 1.31
3011 8730 6.425417 TCTTGACGCACATGTTAATTTCTACA 59.575 34.615 0.00 0.00 0.00 2.74
3012 8731 6.164408 TGACGCACATGTTAATTTCTACAG 57.836 37.500 0.00 0.00 0.00 2.74
3013 8732 5.699001 TGACGCACATGTTAATTTCTACAGT 59.301 36.000 0.00 0.00 0.00 3.55
3014 8733 6.869388 TGACGCACATGTTAATTTCTACAGTA 59.131 34.615 0.00 0.00 0.00 2.74
3015 8734 7.062956 TGACGCACATGTTAATTTCTACAGTAG 59.937 37.037 0.00 0.47 0.00 2.57
3016 8735 6.872020 ACGCACATGTTAATTTCTACAGTAGT 59.128 34.615 7.50 0.00 0.00 2.73
3017 8736 7.386848 ACGCACATGTTAATTTCTACAGTAGTT 59.613 33.333 7.50 0.00 0.00 2.24
3018 8737 8.865978 CGCACATGTTAATTTCTACAGTAGTTA 58.134 33.333 7.50 0.00 0.00 2.24
3019 8738 9.968743 GCACATGTTAATTTCTACAGTAGTTAC 57.031 33.333 7.50 0.00 0.00 2.50
3029 8748 8.517062 TTTCTACAGTAGTTACTACTCCATCC 57.483 38.462 20.80 0.00 44.37 3.51
3030 8749 6.286758 TCTACAGTAGTTACTACTCCATCCG 58.713 44.000 20.80 11.83 44.37 4.18
3031 8750 4.853007 ACAGTAGTTACTACTCCATCCGT 58.147 43.478 20.80 12.42 44.37 4.69
3032 8751 5.259632 ACAGTAGTTACTACTCCATCCGTT 58.740 41.667 20.80 0.00 44.37 4.44
3033 8752 5.356470 ACAGTAGTTACTACTCCATCCGTTC 59.644 44.000 20.80 0.00 44.37 3.95
3034 8753 5.589452 CAGTAGTTACTACTCCATCCGTTCT 59.411 44.000 20.80 0.00 44.37 3.01
3035 8754 4.985538 AGTTACTACTCCATCCGTTCTG 57.014 45.455 0.00 0.00 0.00 3.02
3036 8755 4.597004 AGTTACTACTCCATCCGTTCTGA 58.403 43.478 0.00 0.00 0.00 3.27
3037 8756 5.014858 AGTTACTACTCCATCCGTTCTGAA 58.985 41.667 0.00 0.00 0.00 3.02
3038 8757 5.657302 AGTTACTACTCCATCCGTTCTGAAT 59.343 40.000 0.00 0.00 0.00 2.57
3039 8758 6.154706 AGTTACTACTCCATCCGTTCTGAATT 59.845 38.462 0.00 0.00 0.00 2.17
3040 8759 7.341256 AGTTACTACTCCATCCGTTCTGAATTA 59.659 37.037 0.00 0.00 0.00 1.40
3041 8760 6.732896 ACTACTCCATCCGTTCTGAATTAT 57.267 37.500 0.00 0.00 0.00 1.28
3042 8761 7.125792 ACTACTCCATCCGTTCTGAATTATT 57.874 36.000 0.00 0.00 0.00 1.40
3043 8762 7.565680 ACTACTCCATCCGTTCTGAATTATTT 58.434 34.615 0.00 0.00 0.00 1.40
3044 8763 6.683974 ACTCCATCCGTTCTGAATTATTTG 57.316 37.500 0.00 0.00 0.00 2.32
3045 8764 6.180472 ACTCCATCCGTTCTGAATTATTTGT 58.820 36.000 0.00 0.00 0.00 2.83
3046 8765 6.316390 ACTCCATCCGTTCTGAATTATTTGTC 59.684 38.462 0.00 0.00 0.00 3.18
3047 8766 5.293324 TCCATCCGTTCTGAATTATTTGTCG 59.707 40.000 0.00 0.00 0.00 4.35
3048 8767 4.593597 TCCGTTCTGAATTATTTGTCGC 57.406 40.909 0.00 0.00 0.00 5.19
3049 8768 3.997681 TCCGTTCTGAATTATTTGTCGCA 59.002 39.130 0.00 0.00 0.00 5.10
3050 8769 4.092821 TCCGTTCTGAATTATTTGTCGCAG 59.907 41.667 0.00 0.00 0.00 5.18
3051 8770 4.092821 CCGTTCTGAATTATTTGTCGCAGA 59.907 41.667 0.00 0.00 0.00 4.26
3052 8771 5.390461 CCGTTCTGAATTATTTGTCGCAGAA 60.390 40.000 0.00 0.00 39.69 3.02
3053 8772 6.077197 CGTTCTGAATTATTTGTCGCAGAAA 58.923 36.000 0.00 0.00 42.05 2.52
3054 8773 6.742718 CGTTCTGAATTATTTGTCGCAGAAAT 59.257 34.615 0.00 0.00 42.05 2.17
3055 8774 7.253092 CGTTCTGAATTATTTGTCGCAGAAATG 60.253 37.037 0.00 0.00 42.05 2.32
3056 8775 6.554419 TCTGAATTATTTGTCGCAGAAATGG 58.446 36.000 0.00 0.00 39.69 3.16
3057 8776 6.374053 TCTGAATTATTTGTCGCAGAAATGGA 59.626 34.615 0.00 0.00 39.69 3.41
3058 8777 7.067372 TCTGAATTATTTGTCGCAGAAATGGAT 59.933 33.333 0.00 0.00 39.69 3.41
3059 8778 6.974048 TGAATTATTTGTCGCAGAAATGGATG 59.026 34.615 0.00 0.00 39.69 3.51
3060 8779 5.895636 TTATTTGTCGCAGAAATGGATGT 57.104 34.783 0.00 0.00 39.69 3.06
3061 8780 6.993786 TTATTTGTCGCAGAAATGGATGTA 57.006 33.333 0.00 0.00 39.69 2.29
3062 8781 7.566760 TTATTTGTCGCAGAAATGGATGTAT 57.433 32.000 0.00 0.00 39.69 2.29
3063 8782 5.484173 TTTGTCGCAGAAATGGATGTATC 57.516 39.130 0.00 0.00 39.69 2.24
3064 8783 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
3065 8784 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
3066 8785 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
3067 8786 4.387256 GTCGCAGAAATGGATGTATCTAGC 59.613 45.833 0.00 0.00 39.69 3.42
3068 8787 4.281941 TCGCAGAAATGGATGTATCTAGCT 59.718 41.667 0.00 0.00 0.00 3.32
3069 8788 4.388165 CGCAGAAATGGATGTATCTAGCTG 59.612 45.833 0.00 0.00 0.00 4.24
3070 8789 5.303971 GCAGAAATGGATGTATCTAGCTGT 58.696 41.667 0.00 0.00 0.00 4.40
3071 8790 6.459066 GCAGAAATGGATGTATCTAGCTGTA 58.541 40.000 0.00 0.00 0.00 2.74
3072 8791 7.102346 GCAGAAATGGATGTATCTAGCTGTAT 58.898 38.462 0.00 0.00 0.00 2.29
3073 8792 7.605691 GCAGAAATGGATGTATCTAGCTGTATT 59.394 37.037 0.00 0.00 0.00 1.89
3074 8793 9.499479 CAGAAATGGATGTATCTAGCTGTATTT 57.501 33.333 0.00 0.00 0.00 1.40
3080 8799 9.982651 TGGATGTATCTAGCTGTATTTTAGTTC 57.017 33.333 0.00 0.00 0.00 3.01
3091 8810 9.765795 AGCTGTATTTTAGTTCTACATACATCC 57.234 33.333 0.00 6.43 31.54 3.51
3092 8811 9.542462 GCTGTATTTTAGTTCTACATACATCCA 57.458 33.333 9.57 0.00 31.54 3.41
3099 8818 8.662781 TTAGTTCTACATACATCCATTTCTGC 57.337 34.615 0.00 0.00 0.00 4.26
3100 8819 5.755375 AGTTCTACATACATCCATTTCTGCG 59.245 40.000 0.00 0.00 0.00 5.18
3101 8820 5.529581 TCTACATACATCCATTTCTGCGA 57.470 39.130 0.00 0.00 0.00 5.10
3102 8821 5.289595 TCTACATACATCCATTTCTGCGAC 58.710 41.667 0.00 0.00 0.00 5.19
3103 8822 2.866156 ACATACATCCATTTCTGCGACG 59.134 45.455 0.00 0.00 0.00 5.12
3104 8823 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
3105 8824 1.359848 ACATCCATTTCTGCGACGAC 58.640 50.000 0.00 0.00 0.00 4.34
3106 8825 1.066858 ACATCCATTTCTGCGACGACT 60.067 47.619 0.00 0.00 0.00 4.18
3107 8826 2.165641 ACATCCATTTCTGCGACGACTA 59.834 45.455 0.00 0.00 0.00 2.59
3108 8827 3.186909 CATCCATTTCTGCGACGACTAA 58.813 45.455 0.00 0.00 0.00 2.24
3109 8828 3.520290 TCCATTTCTGCGACGACTAAT 57.480 42.857 0.00 0.00 0.00 1.73
3110 8829 3.857052 TCCATTTCTGCGACGACTAATT 58.143 40.909 0.00 0.00 0.00 1.40
3111 8830 4.250464 TCCATTTCTGCGACGACTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
3112 8831 4.092821 TCCATTTCTGCGACGACTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
3113 8832 4.334443 CATTTCTGCGACGACTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
3114 8833 3.306917 TTCTGCGACGACTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
3115 8834 3.306917 TCTGCGACGACTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
3116 8835 2.991190 TCTGCGACGACTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
3117 8836 1.722464 TGCGACGACTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
3118 8837 1.060122 GCGACGACTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
3119 8838 2.598589 CGACGACTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
3120 8839 2.597305 CGACGACTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
3121 8840 2.928116 GACGACTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3122 8841 2.277084 CGACTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3123 8842 2.093869 CGACTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
3124 8843 3.532542 GACTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
3125 8844 2.910977 ACTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3126 8845 4.098894 ACTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
3127 8846 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
3128 8847 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
3129 8848 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
3145 8864 8.943085 AGGGAGTACTTACTATACTAGTTGCTA 58.057 37.037 0.00 0.00 40.14 3.49
3174 8893 0.611714 AACCGTCATGGACCACTACC 59.388 55.000 0.00 0.00 42.00 3.18
3187 8906 2.171027 ACCACTACCGAACCAACAAGAA 59.829 45.455 0.00 0.00 0.00 2.52
3204 8923 2.330041 AAAAACAACCTCGGCGCG 59.670 55.556 0.00 0.00 0.00 6.86
3223 8942 1.069090 GCGGAATGGTCTCGGCATA 59.931 57.895 0.00 0.00 40.39 3.14
3227 8946 2.693069 GGAATGGTCTCGGCATATGAG 58.307 52.381 6.97 0.00 34.72 2.90
3228 8947 2.613977 GGAATGGTCTCGGCATATGAGG 60.614 54.545 6.97 0.00 34.19 3.86
3229 8948 0.322975 ATGGTCTCGGCATATGAGGC 59.677 55.000 6.97 0.00 37.35 4.70
3237 8956 3.806941 GCATATGAGGCCAACTCCA 57.193 52.632 5.01 0.00 46.01 3.86
3238 8957 2.283145 GCATATGAGGCCAACTCCAT 57.717 50.000 5.01 2.66 46.01 3.41
3239 8958 2.157738 GCATATGAGGCCAACTCCATC 58.842 52.381 5.01 0.00 46.01 3.51
3240 8959 2.420642 CATATGAGGCCAACTCCATCG 58.579 52.381 5.01 0.00 46.01 3.84
3241 8960 0.106708 TATGAGGCCAACTCCATCGC 59.893 55.000 5.01 0.00 46.01 4.58
3242 8961 1.913951 ATGAGGCCAACTCCATCGCA 61.914 55.000 5.01 0.00 46.01 5.10
3243 8962 2.045926 AGGCCAACTCCATCGCAC 60.046 61.111 5.01 0.00 0.00 5.34
3244 8963 3.499737 GGCCAACTCCATCGCACG 61.500 66.667 0.00 0.00 0.00 5.34
3245 8964 2.434185 GCCAACTCCATCGCACGA 60.434 61.111 0.00 0.00 0.00 4.35
3246 8965 1.815421 GCCAACTCCATCGCACGAT 60.815 57.895 0.00 0.00 34.81 3.73
3247 8966 1.766143 GCCAACTCCATCGCACGATC 61.766 60.000 1.86 0.00 31.62 3.69
3248 8967 0.179100 CCAACTCCATCGCACGATCT 60.179 55.000 1.86 0.00 31.62 2.75
3249 8968 1.203928 CAACTCCATCGCACGATCTC 58.796 55.000 1.86 0.00 31.62 2.75
3250 8969 0.817654 AACTCCATCGCACGATCTCA 59.182 50.000 1.86 0.00 31.62 3.27
3251 8970 0.817654 ACTCCATCGCACGATCTCAA 59.182 50.000 1.86 0.00 31.62 3.02
3252 8971 1.204704 ACTCCATCGCACGATCTCAAA 59.795 47.619 1.86 0.00 31.62 2.69
3253 8972 1.590238 CTCCATCGCACGATCTCAAAC 59.410 52.381 1.86 0.00 31.62 2.93
3254 8973 0.298707 CCATCGCACGATCTCAAACG 59.701 55.000 1.86 0.00 31.62 3.60
3255 8974 0.298707 CATCGCACGATCTCAAACGG 59.701 55.000 1.86 0.00 31.62 4.44
3256 8975 0.172578 ATCGCACGATCTCAAACGGA 59.827 50.000 0.00 0.00 0.00 4.69
3257 8976 0.731514 TCGCACGATCTCAAACGGAC 60.732 55.000 0.00 0.00 0.00 4.79
3258 8977 1.702299 GCACGATCTCAAACGGACG 59.298 57.895 0.00 0.00 0.00 4.79
3259 8978 1.007336 GCACGATCTCAAACGGACGT 61.007 55.000 0.00 0.00 34.40 4.34
3260 8979 0.982673 CACGATCTCAAACGGACGTC 59.017 55.000 7.13 7.13 31.82 4.34
3261 8980 0.109412 ACGATCTCAAACGGACGTCC 60.109 55.000 25.28 25.28 0.00 4.79
3279 8998 3.376546 GGCTTGGCCGGATTTTGT 58.623 55.556 5.05 0.00 39.62 2.83
3280 8999 1.215382 GGCTTGGCCGGATTTTGTC 59.785 57.895 5.05 0.00 39.62 3.18
3281 9000 1.250840 GGCTTGGCCGGATTTTGTCT 61.251 55.000 5.05 0.00 39.62 3.41
3282 9001 0.171231 GCTTGGCCGGATTTTGTCTC 59.829 55.000 5.05 0.00 0.00 3.36
3283 9002 1.826385 CTTGGCCGGATTTTGTCTCT 58.174 50.000 5.05 0.00 0.00 3.10
3284 9003 2.162681 CTTGGCCGGATTTTGTCTCTT 58.837 47.619 5.05 0.00 0.00 2.85
3285 9004 3.343617 CTTGGCCGGATTTTGTCTCTTA 58.656 45.455 5.05 0.00 0.00 2.10
3286 9005 2.985896 TGGCCGGATTTTGTCTCTTAG 58.014 47.619 5.05 0.00 0.00 2.18
3287 9006 2.289565 GGCCGGATTTTGTCTCTTAGG 58.710 52.381 5.05 0.00 0.00 2.69
3288 9007 2.289565 GCCGGATTTTGTCTCTTAGGG 58.710 52.381 5.05 0.00 0.00 3.53
3289 9008 2.919228 CCGGATTTTGTCTCTTAGGGG 58.081 52.381 0.00 0.00 0.00 4.79
3290 9009 2.289565 CGGATTTTGTCTCTTAGGGGC 58.710 52.381 0.00 0.00 0.00 5.80
3291 9010 2.289565 GGATTTTGTCTCTTAGGGGCG 58.710 52.381 0.00 0.00 0.00 6.13
3292 9011 2.289565 GATTTTGTCTCTTAGGGGCGG 58.710 52.381 0.00 0.00 0.00 6.13
3293 9012 0.322187 TTTTGTCTCTTAGGGGCGGC 60.322 55.000 0.00 0.00 0.00 6.53
3294 9013 1.485294 TTTGTCTCTTAGGGGCGGCA 61.485 55.000 12.47 0.00 0.00 5.69
3295 9014 1.485294 TTGTCTCTTAGGGGCGGCAA 61.485 55.000 12.47 0.00 0.00 4.52
3296 9015 1.271840 TGTCTCTTAGGGGCGGCAAT 61.272 55.000 12.47 0.00 0.00 3.56
3297 9016 0.815615 GTCTCTTAGGGGCGGCAATG 60.816 60.000 12.47 0.00 0.00 2.82
3298 9017 1.526917 CTCTTAGGGGCGGCAATGG 60.527 63.158 12.47 0.00 0.00 3.16
3299 9018 2.519302 CTTAGGGGCGGCAATGGG 60.519 66.667 12.47 0.00 0.00 4.00
3300 9019 3.343326 TTAGGGGCGGCAATGGGT 61.343 61.111 12.47 0.00 0.00 4.51
3301 9020 2.854300 CTTAGGGGCGGCAATGGGTT 62.854 60.000 12.47 0.00 0.00 4.11
3302 9021 2.847366 TTAGGGGCGGCAATGGGTTC 62.847 60.000 12.47 0.00 0.00 3.62
3304 9023 3.758931 GGGCGGCAATGGGTTCAC 61.759 66.667 12.47 0.00 0.00 3.18
3305 9024 3.758931 GGCGGCAATGGGTTCACC 61.759 66.667 3.07 0.00 40.81 4.02
3315 9034 2.033448 GGTTCACCCATGTCCGCA 59.967 61.111 0.00 0.00 0.00 5.69
3316 9035 1.378514 GGTTCACCCATGTCCGCAT 60.379 57.895 0.00 0.00 35.32 4.73
3317 9036 1.376609 GGTTCACCCATGTCCGCATC 61.377 60.000 0.00 0.00 31.99 3.91
3318 9037 0.392998 GTTCACCCATGTCCGCATCT 60.393 55.000 0.00 0.00 31.99 2.90
3319 9038 0.392863 TTCACCCATGTCCGCATCTG 60.393 55.000 0.00 0.00 31.99 2.90
3320 9039 1.078214 CACCCATGTCCGCATCTGT 60.078 57.895 0.00 0.00 31.99 3.41
3321 9040 0.677731 CACCCATGTCCGCATCTGTT 60.678 55.000 0.00 0.00 31.99 3.16
3322 9041 0.038166 ACCCATGTCCGCATCTGTTT 59.962 50.000 0.00 0.00 31.99 2.83
3323 9042 0.452987 CCCATGTCCGCATCTGTTTG 59.547 55.000 0.00 0.00 31.99 2.93
3324 9043 1.167851 CCATGTCCGCATCTGTTTGT 58.832 50.000 0.00 0.00 31.99 2.83
3325 9044 1.541147 CCATGTCCGCATCTGTTTGTT 59.459 47.619 0.00 0.00 31.99 2.83
3326 9045 2.587956 CATGTCCGCATCTGTTTGTTG 58.412 47.619 0.00 0.00 31.99 3.33
3327 9046 0.950836 TGTCCGCATCTGTTTGTTGG 59.049 50.000 0.00 0.00 0.00 3.77
3328 9047 0.240945 GTCCGCATCTGTTTGTTGGG 59.759 55.000 0.00 0.00 0.00 4.12
3329 9048 0.179004 TCCGCATCTGTTTGTTGGGT 60.179 50.000 0.00 0.00 0.00 4.51
3330 9049 0.240945 CCGCATCTGTTTGTTGGGTC 59.759 55.000 0.00 0.00 0.00 4.46
3331 9050 0.110238 CGCATCTGTTTGTTGGGTCG 60.110 55.000 0.00 0.00 0.00 4.79
3332 9051 0.951558 GCATCTGTTTGTTGGGTCGT 59.048 50.000 0.00 0.00 0.00 4.34
3333 9052 1.334960 GCATCTGTTTGTTGGGTCGTG 60.335 52.381 0.00 0.00 0.00 4.35
3334 9053 1.266718 CATCTGTTTGTTGGGTCGTGG 59.733 52.381 0.00 0.00 0.00 4.94
3335 9054 0.464735 TCTGTTTGTTGGGTCGTGGG 60.465 55.000 0.00 0.00 0.00 4.61
3336 9055 0.750182 CTGTTTGTTGGGTCGTGGGT 60.750 55.000 0.00 0.00 0.00 4.51
3337 9056 1.032657 TGTTTGTTGGGTCGTGGGTG 61.033 55.000 0.00 0.00 0.00 4.61
3338 9057 2.122167 TTTGTTGGGTCGTGGGTGC 61.122 57.895 0.00 0.00 0.00 5.01
3339 9058 4.920112 TGTTGGGTCGTGGGTGCG 62.920 66.667 0.00 0.00 0.00 5.34
3340 9059 4.922026 GTTGGGTCGTGGGTGCGT 62.922 66.667 0.00 0.00 0.00 5.24
3341 9060 4.612412 TTGGGTCGTGGGTGCGTC 62.612 66.667 0.00 0.00 0.00 5.19
3344 9063 4.612412 GGTCGTGGGTGCGTCCAA 62.612 66.667 0.00 0.00 39.27 3.53
3345 9064 3.343421 GTCGTGGGTGCGTCCAAC 61.343 66.667 0.00 0.00 38.72 3.77
3364 9083 3.505184 CGCGGCCGCACCTTAAAT 61.505 61.111 45.26 0.00 42.06 1.40
3365 9084 2.407616 GCGGCCGCACCTTAAATC 59.592 61.111 43.55 11.09 41.49 2.17
3366 9085 2.403378 GCGGCCGCACCTTAAATCA 61.403 57.895 43.55 0.00 41.49 2.57
3367 9086 1.724582 GCGGCCGCACCTTAAATCAT 61.725 55.000 43.55 0.00 41.49 2.45
3368 9087 0.029300 CGGCCGCACCTTAAATCATG 59.971 55.000 14.67 0.00 35.61 3.07
3369 9088 1.102978 GGCCGCACCTTAAATCATGT 58.897 50.000 0.00 0.00 34.51 3.21
3370 9089 1.065551 GGCCGCACCTTAAATCATGTC 59.934 52.381 0.00 0.00 34.51 3.06
3371 9090 1.065551 GCCGCACCTTAAATCATGTCC 59.934 52.381 0.00 0.00 0.00 4.02
3372 9091 1.330521 CCGCACCTTAAATCATGTCCG 59.669 52.381 0.00 0.00 0.00 4.79
3373 9092 1.330521 CGCACCTTAAATCATGTCCGG 59.669 52.381 0.00 0.00 0.00 5.14
3374 9093 1.676006 GCACCTTAAATCATGTCCGGG 59.324 52.381 0.00 0.00 0.00 5.73
3375 9094 2.297701 CACCTTAAATCATGTCCGGGG 58.702 52.381 0.00 0.00 0.00 5.73
3376 9095 1.920351 ACCTTAAATCATGTCCGGGGT 59.080 47.619 0.00 0.00 0.00 4.95
3377 9096 2.297701 CCTTAAATCATGTCCGGGGTG 58.702 52.381 0.00 0.00 0.00 4.61
3378 9097 2.297701 CTTAAATCATGTCCGGGGTGG 58.702 52.381 0.00 0.00 40.09 4.61
3386 9105 2.605295 TCCGGGGTGGACGTGATT 60.605 61.111 0.00 0.00 43.74 2.57
3387 9106 1.305129 TCCGGGGTGGACGTGATTA 60.305 57.895 0.00 0.00 43.74 1.75
3388 9107 0.903924 TCCGGGGTGGACGTGATTAA 60.904 55.000 0.00 0.00 43.74 1.40
3389 9108 0.036199 CCGGGGTGGACGTGATTAAA 60.036 55.000 0.00 0.00 42.00 1.52
3390 9109 1.611148 CCGGGGTGGACGTGATTAAAA 60.611 52.381 0.00 0.00 42.00 1.52
3391 9110 2.152830 CGGGGTGGACGTGATTAAAAA 58.847 47.619 0.00 0.00 0.00 1.94
3448 9167 8.896744 AGTAAATAAAAGTAGATAAAACGGCCC 58.103 33.333 0.00 0.00 0.00 5.80
3449 9168 7.706100 AAATAAAAGTAGATAAAACGGCCCA 57.294 32.000 0.00 0.00 0.00 5.36
3450 9169 6.937436 ATAAAAGTAGATAAAACGGCCCAG 57.063 37.500 0.00 0.00 0.00 4.45
3451 9170 3.994931 AAGTAGATAAAACGGCCCAGT 57.005 42.857 0.00 0.00 0.00 4.00
3452 9171 3.994931 AGTAGATAAAACGGCCCAGTT 57.005 42.857 0.00 0.00 35.59 3.16
3453 9172 4.296621 AGTAGATAAAACGGCCCAGTTT 57.703 40.909 0.00 0.00 45.21 2.66
3454 9173 4.259356 AGTAGATAAAACGGCCCAGTTTC 58.741 43.478 8.93 0.00 42.81 2.78
3455 9174 3.149005 AGATAAAACGGCCCAGTTTCA 57.851 42.857 8.93 0.00 42.81 2.69
3456 9175 2.817844 AGATAAAACGGCCCAGTTTCAC 59.182 45.455 8.93 4.83 42.81 3.18
3457 9176 0.945813 TAAAACGGCCCAGTTTCACG 59.054 50.000 8.93 0.00 42.81 4.35
3458 9177 1.730451 AAAACGGCCCAGTTTCACGG 61.730 55.000 8.93 0.00 42.81 4.94
3459 9178 2.897172 AAACGGCCCAGTTTCACGGT 62.897 55.000 0.00 0.00 39.90 4.83
3460 9179 2.593436 CGGCCCAGTTTCACGGTT 60.593 61.111 0.00 0.00 0.00 4.44
3461 9180 2.613506 CGGCCCAGTTTCACGGTTC 61.614 63.158 0.00 0.00 0.00 3.62
3462 9181 1.527380 GGCCCAGTTTCACGGTTCA 60.527 57.895 0.00 0.00 0.00 3.18
3463 9182 1.652563 GCCCAGTTTCACGGTTCAC 59.347 57.895 0.00 0.00 0.00 3.18
3464 9183 0.818040 GCCCAGTTTCACGGTTCACT 60.818 55.000 0.00 0.00 0.00 3.41
3465 9184 1.675552 CCCAGTTTCACGGTTCACTT 58.324 50.000 0.00 0.00 0.00 3.16
3466 9185 2.841215 CCCAGTTTCACGGTTCACTTA 58.159 47.619 0.00 0.00 0.00 2.24
3467 9186 3.207778 CCCAGTTTCACGGTTCACTTAA 58.792 45.455 0.00 0.00 0.00 1.85
3468 9187 3.628487 CCCAGTTTCACGGTTCACTTAAA 59.372 43.478 0.00 0.00 0.00 1.52
3469 9188 4.496840 CCCAGTTTCACGGTTCACTTAAAC 60.497 45.833 0.00 0.00 0.00 2.01
3474 9193 1.871077 CGGTTCACTTAAACGGCCC 59.129 57.895 0.00 0.00 44.77 5.80
3475 9194 0.885596 CGGTTCACTTAAACGGCCCA 60.886 55.000 0.00 0.00 44.77 5.36
3476 9195 0.879090 GGTTCACTTAAACGGCCCAG 59.121 55.000 0.00 0.00 0.00 4.45
3477 9196 1.601166 GTTCACTTAAACGGCCCAGT 58.399 50.000 0.00 0.00 0.00 4.00
3478 9197 1.265905 GTTCACTTAAACGGCCCAGTG 59.734 52.381 0.00 2.17 38.42 3.66
3479 9198 0.887387 TCACTTAAACGGCCCAGTGC 60.887 55.000 0.00 0.00 37.22 4.40
3493 9212 5.782893 GCCCAGTGCCATAATTTACATAA 57.217 39.130 0.00 0.00 0.00 1.90
3494 9213 6.155475 GCCCAGTGCCATAATTTACATAAA 57.845 37.500 0.00 0.00 0.00 1.40
3495 9214 6.578023 GCCCAGTGCCATAATTTACATAAAA 58.422 36.000 0.00 0.00 0.00 1.52
3496 9215 7.044798 GCCCAGTGCCATAATTTACATAAAAA 58.955 34.615 0.00 0.00 0.00 1.94
3497 9216 7.011016 GCCCAGTGCCATAATTTACATAAAAAC 59.989 37.037 0.00 0.00 0.00 2.43
3498 9217 8.037758 CCCAGTGCCATAATTTACATAAAAACA 58.962 33.333 0.00 0.00 0.00 2.83
3499 9218 9.429359 CCAGTGCCATAATTTACATAAAAACAA 57.571 29.630 0.00 0.00 0.00 2.83
3548 9267 4.178255 GTGCGCGTCGATGTCGTG 62.178 66.667 8.43 11.82 40.80 4.35
3553 9272 4.771356 CGTCGATGTCGTGGCCGT 62.771 66.667 0.00 0.00 40.80 5.68
3554 9273 3.179265 GTCGATGTCGTGGCCGTG 61.179 66.667 0.00 0.00 40.80 4.94
3555 9274 4.429212 TCGATGTCGTGGCCGTGG 62.429 66.667 0.00 0.00 40.80 4.94
3566 9285 4.681978 GCCGTGGCCGTCTTCAGT 62.682 66.667 0.00 0.00 34.56 3.41
3567 9286 2.738521 CCGTGGCCGTCTTCAGTG 60.739 66.667 0.00 0.00 0.00 3.66
3568 9287 2.738521 CGTGGCCGTCTTCAGTGG 60.739 66.667 0.00 0.00 0.00 4.00
3572 9291 3.050275 GCCGTCTTCAGTGGCCAC 61.050 66.667 29.22 29.22 43.06 5.01
3573 9292 2.358737 CCGTCTTCAGTGGCCACC 60.359 66.667 32.29 14.67 0.00 4.61
3574 9293 2.738521 CGTCTTCAGTGGCCACCG 60.739 66.667 32.29 23.16 0.00 4.94
3575 9294 2.358737 GTCTTCAGTGGCCACCGG 60.359 66.667 32.29 24.01 0.00 5.28
3576 9295 2.847234 TCTTCAGTGGCCACCGGT 60.847 61.111 32.29 11.73 0.00 5.28
3577 9296 2.669569 CTTCAGTGGCCACCGGTG 60.670 66.667 32.29 28.26 0.00 4.94
3578 9297 3.476031 CTTCAGTGGCCACCGGTGT 62.476 63.158 32.29 10.87 0.00 4.16
3579 9298 3.469863 TTCAGTGGCCACCGGTGTC 62.470 63.158 32.29 21.33 0.00 3.67
3587 9306 4.318021 CACCGGTGTCGTCGTCGT 62.318 66.667 26.95 0.00 38.33 4.34
3588 9307 4.017877 ACCGGTGTCGTCGTCGTC 62.018 66.667 6.12 0.00 38.33 4.20
3591 9310 4.380628 GGTGTCGTCGTCGTCGCT 62.381 66.667 7.01 0.00 36.31 4.93
3592 9311 3.157523 GTGTCGTCGTCGTCGCTG 61.158 66.667 7.01 0.00 38.33 5.18
3593 9312 3.340253 TGTCGTCGTCGTCGCTGA 61.340 61.111 7.01 0.00 38.33 4.26
3594 9313 2.864248 GTCGTCGTCGTCGCTGAC 60.864 66.667 7.01 9.65 38.33 3.51
3604 9323 3.785499 TCGCTGACGAGGTCGACG 61.785 66.667 9.92 0.17 45.12 5.12
3605 9324 4.086178 CGCTGACGAGGTCGACGT 62.086 66.667 11.12 11.12 46.58 4.34
3606 9325 2.733671 CGCTGACGAGGTCGACGTA 61.734 63.158 11.30 0.00 43.97 3.57
3607 9326 1.060622 GCTGACGAGGTCGACGTAG 59.939 63.158 11.30 13.65 43.97 3.51
3619 9338 2.796651 ACGTAGTCCGATGGCGTC 59.203 61.111 0.00 0.00 29.74 5.19
3620 9339 2.025727 CGTAGTCCGATGGCGTCC 59.974 66.667 0.14 0.00 39.56 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.676471 GGACCACCGGCAAAGCAT 60.676 61.111 0.00 0.00 0.00 3.79
5 6 0.034477 ATTAGGGACCACCGGCAAAG 60.034 55.000 0.00 0.00 46.96 2.77
25 26 4.816385 AGTGAAACATATACCATCAAGCCG 59.184 41.667 0.00 0.00 41.43 5.52
49 50 8.066612 ACTATGAATAGGTTGGGAACAAAATG 57.933 34.615 2.55 0.00 41.87 2.32
60 61 9.881649 ATGTGCATATCTACTATGAATAGGTTG 57.118 33.333 0.00 0.00 39.79 3.77
62 63 9.881649 CAATGTGCATATCTACTATGAATAGGT 57.118 33.333 0.00 0.00 39.79 3.08
72 73 4.165950 TCCAACCCAATGTGCATATCTACT 59.834 41.667 0.00 0.00 0.00 2.57
82 83 3.510753 TGTGATCAATCCAACCCAATGTG 59.489 43.478 0.00 0.00 0.00 3.21
110 111 3.004734 GGTGGAAATGGATCGGCAATAAG 59.995 47.826 0.00 0.00 0.00 1.73
115 116 1.208706 TAGGTGGAAATGGATCGGCA 58.791 50.000 0.00 0.00 0.00 5.69
117 118 2.154462 GCATAGGTGGAAATGGATCGG 58.846 52.381 0.00 0.00 0.00 4.18
138 139 3.140325 ACGGTTCCACAAACAGATGAT 57.860 42.857 0.00 0.00 39.81 2.45
156 157 0.443869 CCAATGACGCAGGAAGAACG 59.556 55.000 0.00 0.00 0.00 3.95
183 190 5.277490 CCAATGAATGACGTATGAATCGCTT 60.277 40.000 0.00 0.00 0.00 4.68
227 238 3.775316 ACGAACCCAATAGGAAGAGTCAT 59.225 43.478 0.00 0.00 39.89 3.06
251 262 2.593257 GACCCGTGAGAAGAAAGTACG 58.407 52.381 0.00 0.00 34.78 3.67
324 335 0.254178 TCTACTAGAAGGGACGGCGT 59.746 55.000 14.65 14.65 0.00 5.68
325 336 1.334243 CTTCTACTAGAAGGGACGGCG 59.666 57.143 15.64 4.80 46.03 6.46
449 460 1.480312 CCAGAGAGACCGATGGATCCT 60.480 57.143 14.23 0.00 34.60 3.24
486 497 8.949177 TCAATTGATGAAGAAGATCGAAATTCA 58.051 29.630 3.38 8.90 34.30 2.57
544 555 5.343307 AGACCAATGGATAATTGCAAACC 57.657 39.130 6.16 5.83 43.80 3.27
583 595 5.880332 TGAAGAGGATCGGAAATGGTAAAAG 59.120 40.000 0.00 0.00 42.67 2.27
626 638 5.409214 CCAAACAATGCAAAGAACCCATAAG 59.591 40.000 0.00 0.00 0.00 1.73
686 698 6.622028 GCGAAGAGGATCGAAAATGGTAAAAA 60.622 38.462 0.24 0.00 45.48 1.94
698 710 2.640184 TCAACTAGCGAAGAGGATCGA 58.360 47.619 0.24 0.00 45.48 3.59
703 715 4.116747 ACTTCATCAACTAGCGAAGAGG 57.883 45.455 5.09 5.09 38.56 3.69
790 805 3.641436 ACGGCCTTCTTTTCTCCAATTTT 59.359 39.130 0.00 0.00 0.00 1.82
791 806 3.230976 ACGGCCTTCTTTTCTCCAATTT 58.769 40.909 0.00 0.00 0.00 1.82
792 807 2.876581 ACGGCCTTCTTTTCTCCAATT 58.123 42.857 0.00 0.00 0.00 2.32
796 811 2.742589 CACTTACGGCCTTCTTTTCTCC 59.257 50.000 0.00 0.00 0.00 3.71
797 812 2.742589 CCACTTACGGCCTTCTTTTCTC 59.257 50.000 0.00 0.00 0.00 2.87
798 813 2.370849 TCCACTTACGGCCTTCTTTTCT 59.629 45.455 0.00 0.00 0.00 2.52
800 815 2.943036 TCCACTTACGGCCTTCTTTT 57.057 45.000 0.00 0.00 0.00 2.27
815 863 2.763448 AGACCAAGCAGAGACTATCCAC 59.237 50.000 0.00 0.00 0.00 4.02
829 877 0.107312 CAGATGGGCCAGAGACCAAG 60.107 60.000 13.78 0.00 40.73 3.61
914 962 1.600916 AAGCTCCTTTGACGTGCCC 60.601 57.895 0.00 0.00 0.00 5.36
950 998 0.103026 TTGACGAGCGGAGATGATGG 59.897 55.000 0.00 0.00 0.00 3.51
1123 1192 0.550147 ACTGAGGCATAGGGGTTGGT 60.550 55.000 0.00 0.00 0.00 3.67
1126 1195 0.253160 TGGACTGAGGCATAGGGGTT 60.253 55.000 0.00 0.00 0.00 4.11
1140 1209 3.334054 GGGGGAGCAAGCTGGACT 61.334 66.667 0.00 0.00 0.00 3.85
1371 1440 2.804912 GGAGTAGCTAACCCCGCCC 61.805 68.421 0.00 0.00 0.00 6.13
1380 1449 1.134995 TCGACGTTCGAGGAGTAGCTA 60.135 52.381 6.09 0.00 44.82 3.32
1614 1683 1.606531 GCAGACCATGAGCTTCCCT 59.393 57.895 0.00 0.00 0.00 4.20
1752 1821 3.108288 GCTCTCCCCGTCCCCATTC 62.108 68.421 0.00 0.00 0.00 2.67
1842 1911 7.476175 ACAAAGTTGTTACCGAATCCCTCGA 62.476 44.000 0.00 0.00 44.17 4.04
1843 1912 5.331789 ACAAAGTTGTTACCGAATCCCTCG 61.332 45.833 0.00 0.00 42.28 4.63
1844 1913 4.070009 ACAAAGTTGTTACCGAATCCCTC 58.930 43.478 0.00 0.00 38.47 4.30
1845 1914 4.094830 ACAAAGTTGTTACCGAATCCCT 57.905 40.909 0.00 0.00 38.47 4.20
1928 2047 3.263425 TCCCAAGTATTTGTCCTCCTGTC 59.737 47.826 0.00 0.00 32.21 3.51
1949 3779 4.331168 AGTTTTCATAAGAGATGCGCACTC 59.669 41.667 23.77 23.77 34.95 3.51
2020 3851 6.750039 CGTTCGATTTACCATGGCTAAAATTT 59.250 34.615 13.04 1.93 0.00 1.82
2029 3860 5.453648 TGAAAAACGTTCGATTTACCATGG 58.546 37.500 11.19 11.19 0.00 3.66
2055 3886 4.678509 TCCTCACGTCAACATAAATTGC 57.321 40.909 0.00 0.00 0.00 3.56
2068 3899 4.007659 GGTTCAAATTACCATCCTCACGT 58.992 43.478 0.00 0.00 35.67 4.49
2071 3902 4.666412 TGGGTTCAAATTACCATCCTCA 57.334 40.909 0.00 0.00 37.40 3.86
2107 3938 9.483916 TCAATTTACATGAGACGAAGAAAGTAA 57.516 29.630 0.00 0.00 0.00 2.24
2125 3956 5.689819 ACATCTGTTTGAGCGTCAATTTAC 58.310 37.500 2.09 0.00 36.11 2.01
2127 3958 4.836125 ACATCTGTTTGAGCGTCAATTT 57.164 36.364 2.09 0.00 36.11 1.82
2157 3988 3.181492 GCTGTAAAGTACTCCCTCCGTAC 60.181 52.174 0.00 0.00 37.96 3.67
2158 3989 3.019564 GCTGTAAAGTACTCCCTCCGTA 58.980 50.000 0.00 0.00 0.00 4.02
2163 3994 3.056749 CGTTGAGCTGTAAAGTACTCCCT 60.057 47.826 0.00 0.00 0.00 4.20
2187 4064 7.848716 CTCAAGTGAAATGTTGAGTTGAATC 57.151 36.000 4.28 0.00 43.15 2.52
2226 4103 7.233632 TCCCGCTTACTATCTACCACTAATAA 58.766 38.462 0.00 0.00 0.00 1.40
2299 4679 6.316140 GCAGTGATGACATTATGAAACTGGTA 59.684 38.462 0.00 0.00 35.47 3.25
2350 7750 8.812513 TTGACATTATCTGATGAAAGAATGGT 57.187 30.769 12.32 2.13 31.11 3.55
2441 7841 4.279169 TCCAGGATTGAAAAAGACAGCAAG 59.721 41.667 0.00 0.00 0.00 4.01
2549 7949 0.471780 AAGGCCCCCAAAAACTCAGG 60.472 55.000 0.00 0.00 0.00 3.86
2619 8019 2.083774 TGGTGGCGTTTGATTCATCTC 58.916 47.619 0.00 0.00 0.00 2.75
2634 8069 5.006552 CACAAGCTTAAACATTGTTTGGTGG 59.993 40.000 22.04 12.94 35.04 4.61
2670 8105 4.719773 ACTGGGATGGCTACATACTGTAAA 59.280 41.667 0.00 0.00 38.07 2.01
2672 8107 3.641436 CACTGGGATGGCTACATACTGTA 59.359 47.826 0.00 0.00 38.07 2.74
2689 8124 1.162698 CAGAACATCACTGGCACTGG 58.837 55.000 0.00 0.00 0.00 4.00
2724 8159 6.260936 GCATGCACTGTGTAAGGTAGAATAAT 59.739 38.462 14.21 0.00 0.00 1.28
2747 8183 7.094634 GGAGAAACAATGAAACAGATAGAAGCA 60.095 37.037 0.00 0.00 0.00 3.91
2754 8190 7.065085 CGACTATGGAGAAACAATGAAACAGAT 59.935 37.037 0.00 0.00 0.00 2.90
2778 8214 7.051623 ACTAGCATTTAATTTGGGATGTACGA 58.948 34.615 0.00 0.00 0.00 3.43
2780 8216 9.869757 AAAACTAGCATTTAATTTGGGATGTAC 57.130 29.630 0.00 0.00 0.00 2.90
2823 8259 2.536365 CATGCCTGAAACATGTGATGC 58.464 47.619 0.00 0.00 40.04 3.91
2854 8290 6.245408 ACATACAGTGTACATTTTGGTCCAT 58.755 36.000 4.80 0.00 39.91 3.41
2883 8320 6.707608 CAGTGATGGTAGCTGCAGAAATAATA 59.292 38.462 20.43 0.00 0.00 0.98
2884 8321 5.530171 CAGTGATGGTAGCTGCAGAAATAAT 59.470 40.000 20.43 4.51 0.00 1.28
2885 8322 4.877823 CAGTGATGGTAGCTGCAGAAATAA 59.122 41.667 20.43 0.00 0.00 1.40
2886 8323 4.445453 CAGTGATGGTAGCTGCAGAAATA 58.555 43.478 20.43 3.58 0.00 1.40
2887 8324 3.276857 CAGTGATGGTAGCTGCAGAAAT 58.723 45.455 20.43 4.69 0.00 2.17
2908 8508 0.110486 TTTCTCAGGCCAGTTGGTCC 59.890 55.000 5.01 1.58 41.83 4.46
2954 8671 8.109634 AGTTATCTTTTGCTCTTTTAGGGATGA 58.890 33.333 0.00 0.00 0.00 2.92
2961 8678 5.703592 TGCCGAGTTATCTTTTGCTCTTTTA 59.296 36.000 0.00 0.00 0.00 1.52
2962 8679 4.518970 TGCCGAGTTATCTTTTGCTCTTTT 59.481 37.500 0.00 0.00 0.00 2.27
3012 8731 5.587844 TCAGAACGGATGGAGTAGTAACTAC 59.412 44.000 0.00 0.00 35.56 2.73
3013 8732 5.748402 TCAGAACGGATGGAGTAGTAACTA 58.252 41.667 0.00 0.00 35.56 2.24
3014 8733 4.597004 TCAGAACGGATGGAGTAGTAACT 58.403 43.478 0.00 0.00 39.21 2.24
3015 8734 4.978083 TCAGAACGGATGGAGTAGTAAC 57.022 45.455 0.00 0.00 0.00 2.50
3016 8735 6.540438 AATTCAGAACGGATGGAGTAGTAA 57.460 37.500 0.00 0.00 0.00 2.24
3017 8736 7.834881 ATAATTCAGAACGGATGGAGTAGTA 57.165 36.000 0.00 0.00 0.00 1.82
3018 8737 6.732896 ATAATTCAGAACGGATGGAGTAGT 57.267 37.500 0.00 0.00 0.00 2.73
3019 8738 7.495934 ACAAATAATTCAGAACGGATGGAGTAG 59.504 37.037 0.00 0.00 0.00 2.57
3020 8739 7.335627 ACAAATAATTCAGAACGGATGGAGTA 58.664 34.615 0.00 0.00 0.00 2.59
3021 8740 6.180472 ACAAATAATTCAGAACGGATGGAGT 58.820 36.000 0.00 0.00 0.00 3.85
3022 8741 6.510157 CGACAAATAATTCAGAACGGATGGAG 60.510 42.308 0.00 0.00 0.00 3.86
3023 8742 5.293324 CGACAAATAATTCAGAACGGATGGA 59.707 40.000 0.00 0.00 0.00 3.41
3024 8743 5.501715 CGACAAATAATTCAGAACGGATGG 58.498 41.667 0.00 0.00 0.00 3.51
3025 8744 4.963953 GCGACAAATAATTCAGAACGGATG 59.036 41.667 0.00 0.00 0.00 3.51
3026 8745 4.634004 TGCGACAAATAATTCAGAACGGAT 59.366 37.500 0.00 0.00 0.00 4.18
3027 8746 3.997681 TGCGACAAATAATTCAGAACGGA 59.002 39.130 0.00 0.00 0.00 4.69
3028 8747 4.092821 TCTGCGACAAATAATTCAGAACGG 59.907 41.667 0.00 0.00 0.00 4.44
3029 8748 5.203358 TCTGCGACAAATAATTCAGAACG 57.797 39.130 0.00 0.00 0.00 3.95
3030 8749 7.008628 CCATTTCTGCGACAAATAATTCAGAAC 59.991 37.037 0.00 0.00 39.40 3.01
3031 8750 7.028962 CCATTTCTGCGACAAATAATTCAGAA 58.971 34.615 0.00 0.00 38.37 3.02
3032 8751 6.374053 TCCATTTCTGCGACAAATAATTCAGA 59.626 34.615 0.00 0.00 0.00 3.27
3033 8752 6.554419 TCCATTTCTGCGACAAATAATTCAG 58.446 36.000 0.00 0.00 0.00 3.02
3034 8753 6.507958 TCCATTTCTGCGACAAATAATTCA 57.492 33.333 0.00 0.00 0.00 2.57
3035 8754 6.974622 ACATCCATTTCTGCGACAAATAATTC 59.025 34.615 0.00 0.00 0.00 2.17
3036 8755 6.866480 ACATCCATTTCTGCGACAAATAATT 58.134 32.000 0.00 0.00 0.00 1.40
3037 8756 6.455360 ACATCCATTTCTGCGACAAATAAT 57.545 33.333 0.00 0.00 0.00 1.28
3038 8757 5.895636 ACATCCATTTCTGCGACAAATAA 57.104 34.783 0.00 0.00 0.00 1.40
3039 8758 6.992123 AGATACATCCATTTCTGCGACAAATA 59.008 34.615 0.00 0.00 0.00 1.40
3040 8759 5.824624 AGATACATCCATTTCTGCGACAAAT 59.175 36.000 0.00 0.00 0.00 2.32
3041 8760 5.185454 AGATACATCCATTTCTGCGACAAA 58.815 37.500 0.00 0.00 0.00 2.83
3042 8761 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
3043 8762 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
3044 8763 4.387256 GCTAGATACATCCATTTCTGCGAC 59.613 45.833 0.00 0.00 0.00 5.19
3045 8764 4.281941 AGCTAGATACATCCATTTCTGCGA 59.718 41.667 0.00 0.00 0.00 5.10
3046 8765 4.388165 CAGCTAGATACATCCATTTCTGCG 59.612 45.833 0.00 0.00 0.00 5.18
3047 8766 5.303971 ACAGCTAGATACATCCATTTCTGC 58.696 41.667 0.00 0.00 0.00 4.26
3048 8767 9.499479 AAATACAGCTAGATACATCCATTTCTG 57.501 33.333 0.00 0.00 0.00 3.02
3054 8773 9.982651 GAACTAAAATACAGCTAGATACATCCA 57.017 33.333 0.00 0.00 0.00 3.41
3065 8784 9.765795 GGATGTATGTAGAACTAAAATACAGCT 57.234 33.333 20.46 10.09 33.24 4.24
3066 8785 9.542462 TGGATGTATGTAGAACTAAAATACAGC 57.458 33.333 16.84 16.84 33.24 4.40
3073 8792 9.109393 GCAGAAATGGATGTATGTAGAACTAAA 57.891 33.333 0.00 0.00 0.00 1.85
3074 8793 7.438160 CGCAGAAATGGATGTATGTAGAACTAA 59.562 37.037 0.00 0.00 0.00 2.24
3075 8794 6.923508 CGCAGAAATGGATGTATGTAGAACTA 59.076 38.462 0.00 0.00 0.00 2.24
3076 8795 5.755375 CGCAGAAATGGATGTATGTAGAACT 59.245 40.000 0.00 0.00 0.00 3.01
3077 8796 5.753438 TCGCAGAAATGGATGTATGTAGAAC 59.247 40.000 0.00 0.00 0.00 3.01
3078 8797 5.753438 GTCGCAGAAATGGATGTATGTAGAA 59.247 40.000 0.00 0.00 39.69 2.10
3079 8798 5.289595 GTCGCAGAAATGGATGTATGTAGA 58.710 41.667 0.00 0.00 39.69 2.59
3080 8799 4.148871 CGTCGCAGAAATGGATGTATGTAG 59.851 45.833 0.00 0.00 39.69 2.74
3081 8800 4.048504 CGTCGCAGAAATGGATGTATGTA 58.951 43.478 0.00 0.00 39.69 2.29
3082 8801 2.866156 CGTCGCAGAAATGGATGTATGT 59.134 45.455 0.00 0.00 39.69 2.29
3083 8802 3.060272 GTCGTCGCAGAAATGGATGTATG 60.060 47.826 0.00 0.00 39.69 2.39
3084 8803 3.123804 GTCGTCGCAGAAATGGATGTAT 58.876 45.455 0.00 0.00 39.69 2.29
3085 8804 2.165641 AGTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
3086 8805 1.066858 AGTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
3087 8806 1.645034 AGTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
3088 8807 3.520290 TTAGTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
3089 8808 3.520290 ATTAGTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
3090 8809 4.334443 CAAATTAGTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
3091 8810 4.092821 TCCAAATTAGTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3092 8811 4.250464 TCCAAATTAGTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3093 8812 3.655486 TCCAAATTAGTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3094 8813 3.306917 TCCAAATTAGTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3095 8814 2.991190 GTTCCAAATTAGTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3096 8815 2.222508 CGTTCCAAATTAGTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
3097 8816 1.722464 CGTTCCAAATTAGTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
3098 8817 1.060122 CCGTTCCAAATTAGTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
3099 8818 2.597305 CTCCGTTCCAAATTAGTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
3100 8819 2.928116 CCTCCGTTCCAAATTAGTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
3101 8820 2.354403 CCCTCCGTTCCAAATTAGTCGT 60.354 50.000 0.00 0.00 0.00 4.34
3102 8821 2.093869 TCCCTCCGTTCCAAATTAGTCG 60.094 50.000 0.00 0.00 0.00 4.18
3103 8822 3.055312 ACTCCCTCCGTTCCAAATTAGTC 60.055 47.826 0.00 0.00 0.00 2.59
3104 8823 2.910977 ACTCCCTCCGTTCCAAATTAGT 59.089 45.455 0.00 0.00 0.00 2.24
3105 8824 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
3106 8825 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
3107 8826 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
3108 8827 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
3109 8828 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
3110 8829 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
3111 8830 2.042162 AGTAAGTACTCCCTCCGTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
3112 8831 2.732763 AGTAAGTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
3113 8832 6.295249 AGTATAGTAAGTACTCCCTCCGTTC 58.705 44.000 0.00 0.00 37.73 3.95
3114 8833 6.259346 AGTATAGTAAGTACTCCCTCCGTT 57.741 41.667 0.00 0.00 37.73 4.44
3115 8834 5.903198 AGTATAGTAAGTACTCCCTCCGT 57.097 43.478 0.00 0.00 37.73 4.69
3145 8864 5.046159 TGGTCCATGACGGTTTTACTAATCT 60.046 40.000 0.00 0.00 35.57 2.40
3187 8906 2.330041 CGCGCCGAGGTTGTTTTT 59.670 55.556 0.00 0.00 0.00 1.94
3204 8923 2.377628 TATGCCGAGACCATTCCGCC 62.378 60.000 0.00 0.00 0.00 6.13
3207 8926 2.613977 CCTCATATGCCGAGACCATTCC 60.614 54.545 0.00 0.00 31.84 3.01
3223 8942 1.153086 GCGATGGAGTTGGCCTCAT 60.153 57.895 3.32 0.00 42.40 2.90
3227 8946 3.499737 CGTGCGATGGAGTTGGCC 61.500 66.667 0.00 0.00 0.00 5.36
3228 8947 1.766143 GATCGTGCGATGGAGTTGGC 61.766 60.000 12.03 0.00 34.60 4.52
3229 8948 0.179100 AGATCGTGCGATGGAGTTGG 60.179 55.000 12.03 0.00 34.60 3.77
3230 8949 1.203928 GAGATCGTGCGATGGAGTTG 58.796 55.000 12.03 0.00 34.60 3.16
3231 8950 0.817654 TGAGATCGTGCGATGGAGTT 59.182 50.000 12.03 0.00 34.60 3.01
3232 8951 0.817654 TTGAGATCGTGCGATGGAGT 59.182 50.000 12.03 0.00 34.60 3.85
3233 8952 1.590238 GTTTGAGATCGTGCGATGGAG 59.410 52.381 12.03 0.00 34.60 3.86
3234 8953 1.640428 GTTTGAGATCGTGCGATGGA 58.360 50.000 12.03 0.00 34.60 3.41
3235 8954 0.298707 CGTTTGAGATCGTGCGATGG 59.701 55.000 12.03 0.00 34.60 3.51
3236 8955 0.298707 CCGTTTGAGATCGTGCGATG 59.701 55.000 12.03 0.00 34.60 3.84
3237 8956 0.172578 TCCGTTTGAGATCGTGCGAT 59.827 50.000 6.80 6.80 37.59 4.58
3238 8957 0.731514 GTCCGTTTGAGATCGTGCGA 60.732 55.000 0.00 0.00 0.00 5.10
3239 8958 1.702299 GTCCGTTTGAGATCGTGCG 59.298 57.895 0.00 0.00 0.00 5.34
3240 8959 1.007336 ACGTCCGTTTGAGATCGTGC 61.007 55.000 0.00 0.00 0.00 5.34
3241 8960 0.982673 GACGTCCGTTTGAGATCGTG 59.017 55.000 3.51 0.00 0.00 4.35
3242 8961 0.109412 GGACGTCCGTTTGAGATCGT 60.109 55.000 20.85 0.00 0.00 3.73
3243 8962 2.650163 GGACGTCCGTTTGAGATCG 58.350 57.895 20.85 0.00 0.00 3.69
3262 8981 1.215382 GACAAAATCCGGCCAAGCC 59.785 57.895 2.24 0.00 46.75 4.35
3263 8982 0.171231 GAGACAAAATCCGGCCAAGC 59.829 55.000 2.24 0.00 0.00 4.01
3264 8983 1.826385 AGAGACAAAATCCGGCCAAG 58.174 50.000 2.24 0.00 0.00 3.61
3265 8984 2.286365 AAGAGACAAAATCCGGCCAA 57.714 45.000 2.24 0.00 0.00 4.52
3266 8985 2.355716 CCTAAGAGACAAAATCCGGCCA 60.356 50.000 2.24 0.00 0.00 5.36
3267 8986 2.289565 CCTAAGAGACAAAATCCGGCC 58.710 52.381 0.00 0.00 0.00 6.13
3268 8987 2.289565 CCCTAAGAGACAAAATCCGGC 58.710 52.381 0.00 0.00 0.00 6.13
3269 8988 2.919228 CCCCTAAGAGACAAAATCCGG 58.081 52.381 0.00 0.00 0.00 5.14
3270 8989 2.289565 GCCCCTAAGAGACAAAATCCG 58.710 52.381 0.00 0.00 0.00 4.18
3271 8990 2.289565 CGCCCCTAAGAGACAAAATCC 58.710 52.381 0.00 0.00 0.00 3.01
3272 8991 2.289565 CCGCCCCTAAGAGACAAAATC 58.710 52.381 0.00 0.00 0.00 2.17
3273 8992 1.682087 GCCGCCCCTAAGAGACAAAAT 60.682 52.381 0.00 0.00 0.00 1.82
3274 8993 0.322187 GCCGCCCCTAAGAGACAAAA 60.322 55.000 0.00 0.00 0.00 2.44
3275 8994 1.298667 GCCGCCCCTAAGAGACAAA 59.701 57.895 0.00 0.00 0.00 2.83
3276 8995 1.485294 TTGCCGCCCCTAAGAGACAA 61.485 55.000 0.00 0.00 0.00 3.18
3277 8996 1.271840 ATTGCCGCCCCTAAGAGACA 61.272 55.000 0.00 0.00 0.00 3.41
3278 8997 0.815615 CATTGCCGCCCCTAAGAGAC 60.816 60.000 0.00 0.00 0.00 3.36
3279 8998 1.526887 CATTGCCGCCCCTAAGAGA 59.473 57.895 0.00 0.00 0.00 3.10
3280 8999 1.526917 CCATTGCCGCCCCTAAGAG 60.527 63.158 0.00 0.00 0.00 2.85
3281 9000 2.595095 CCATTGCCGCCCCTAAGA 59.405 61.111 0.00 0.00 0.00 2.10
3282 9001 2.519302 CCCATTGCCGCCCCTAAG 60.519 66.667 0.00 0.00 0.00 2.18
3283 9002 2.847366 GAACCCATTGCCGCCCCTAA 62.847 60.000 0.00 0.00 0.00 2.69
3284 9003 3.343326 AACCCATTGCCGCCCCTA 61.343 61.111 0.00 0.00 0.00 3.53
3285 9004 4.759205 GAACCCATTGCCGCCCCT 62.759 66.667 0.00 0.00 0.00 4.79
3287 9006 3.758931 GTGAACCCATTGCCGCCC 61.759 66.667 0.00 0.00 0.00 6.13
3288 9007 3.758931 GGTGAACCCATTGCCGCC 61.759 66.667 0.00 0.00 0.00 6.13
3298 9017 1.376609 GATGCGGACATGGGTGAACC 61.377 60.000 0.00 0.00 36.35 3.62
3299 9018 0.392998 AGATGCGGACATGGGTGAAC 60.393 55.000 0.00 0.00 36.35 3.18
3300 9019 0.392863 CAGATGCGGACATGGGTGAA 60.393 55.000 0.00 0.00 36.35 3.18
3301 9020 1.221566 CAGATGCGGACATGGGTGA 59.778 57.895 0.00 0.00 36.35 4.02
3302 9021 0.677731 AACAGATGCGGACATGGGTG 60.678 55.000 0.00 0.00 36.35 4.61
3303 9022 0.038166 AAACAGATGCGGACATGGGT 59.962 50.000 0.00 0.00 36.35 4.51
3304 9023 0.452987 CAAACAGATGCGGACATGGG 59.547 55.000 0.00 0.00 36.35 4.00
3305 9024 1.167851 ACAAACAGATGCGGACATGG 58.832 50.000 0.00 0.00 36.35 3.66
3306 9025 2.587956 CAACAAACAGATGCGGACATG 58.412 47.619 0.00 0.00 36.35 3.21
3307 9026 1.541147 CCAACAAACAGATGCGGACAT 59.459 47.619 0.00 0.00 39.98 3.06
3308 9027 0.950836 CCAACAAACAGATGCGGACA 59.049 50.000 0.00 0.00 0.00 4.02
3309 9028 0.240945 CCCAACAAACAGATGCGGAC 59.759 55.000 0.00 0.00 0.00 4.79
3310 9029 0.179004 ACCCAACAAACAGATGCGGA 60.179 50.000 0.00 0.00 0.00 5.54
3311 9030 0.240945 GACCCAACAAACAGATGCGG 59.759 55.000 0.00 0.00 0.00 5.69
3312 9031 0.110238 CGACCCAACAAACAGATGCG 60.110 55.000 0.00 0.00 0.00 4.73
3313 9032 0.951558 ACGACCCAACAAACAGATGC 59.048 50.000 0.00 0.00 0.00 3.91
3314 9033 1.266718 CCACGACCCAACAAACAGATG 59.733 52.381 0.00 0.00 0.00 2.90
3315 9034 1.604604 CCACGACCCAACAAACAGAT 58.395 50.000 0.00 0.00 0.00 2.90
3316 9035 0.464735 CCCACGACCCAACAAACAGA 60.465 55.000 0.00 0.00 0.00 3.41
3317 9036 0.750182 ACCCACGACCCAACAAACAG 60.750 55.000 0.00 0.00 0.00 3.16
3318 9037 1.032657 CACCCACGACCCAACAAACA 61.033 55.000 0.00 0.00 0.00 2.83
3319 9038 1.731093 CACCCACGACCCAACAAAC 59.269 57.895 0.00 0.00 0.00 2.93
3320 9039 2.122167 GCACCCACGACCCAACAAA 61.122 57.895 0.00 0.00 0.00 2.83
3321 9040 2.517402 GCACCCACGACCCAACAA 60.517 61.111 0.00 0.00 0.00 2.83
3322 9041 4.920112 CGCACCCACGACCCAACA 62.920 66.667 0.00 0.00 34.06 3.33
3323 9042 4.922026 ACGCACCCACGACCCAAC 62.922 66.667 0.00 0.00 36.70 3.77
3324 9043 4.612412 GACGCACCCACGACCCAA 62.612 66.667 0.00 0.00 36.70 4.12
3327 9046 4.612412 TTGGACGCACCCACGACC 62.612 66.667 0.00 0.00 46.04 4.79
3328 9047 3.343421 GTTGGACGCACCCACGAC 61.343 66.667 0.00 0.00 35.62 4.34
3347 9066 3.449095 GATTTAAGGTGCGGCCGCG 62.449 63.158 41.73 12.29 45.51 6.46
3348 9067 1.724582 ATGATTTAAGGTGCGGCCGC 61.725 55.000 42.35 42.35 43.70 6.53
3349 9068 0.029300 CATGATTTAAGGTGCGGCCG 59.971 55.000 24.05 24.05 43.70 6.13
3350 9069 1.065551 GACATGATTTAAGGTGCGGCC 59.934 52.381 0.00 0.00 37.58 6.13
3351 9070 1.065551 GGACATGATTTAAGGTGCGGC 59.934 52.381 0.00 0.00 0.00 6.53
3352 9071 1.330521 CGGACATGATTTAAGGTGCGG 59.669 52.381 0.00 0.00 40.65 5.69
3353 9072 1.330521 CCGGACATGATTTAAGGTGCG 59.669 52.381 0.00 0.00 43.34 5.34
3354 9073 1.676006 CCCGGACATGATTTAAGGTGC 59.324 52.381 0.73 0.00 0.00 5.01
3355 9074 2.297701 CCCCGGACATGATTTAAGGTG 58.702 52.381 0.73 0.00 0.00 4.00
3356 9075 1.920351 ACCCCGGACATGATTTAAGGT 59.080 47.619 0.73 0.00 0.00 3.50
3357 9076 2.297701 CACCCCGGACATGATTTAAGG 58.702 52.381 0.73 0.00 0.00 2.69
3358 9077 2.092646 TCCACCCCGGACATGATTTAAG 60.093 50.000 0.73 0.00 39.64 1.85
3359 9078 1.916874 TCCACCCCGGACATGATTTAA 59.083 47.619 0.73 0.00 39.64 1.52
3360 9079 1.585895 TCCACCCCGGACATGATTTA 58.414 50.000 0.73 0.00 39.64 1.40
3361 9080 2.393416 TCCACCCCGGACATGATTT 58.607 52.632 0.73 0.00 39.64 2.17
3362 9081 4.162540 TCCACCCCGGACATGATT 57.837 55.556 0.73 0.00 39.64 2.57
3369 9088 0.903924 TTAATCACGTCCACCCCGGA 60.904 55.000 0.73 0.00 43.61 5.14
3370 9089 0.036199 TTTAATCACGTCCACCCCGG 60.036 55.000 0.00 0.00 0.00 5.73
3371 9090 1.810959 TTTTAATCACGTCCACCCCG 58.189 50.000 0.00 0.00 0.00 5.73
3422 9141 8.896744 GGGCCGTTTTATCTACTTTTATTTACT 58.103 33.333 0.00 0.00 0.00 2.24
3423 9142 8.676401 TGGGCCGTTTTATCTACTTTTATTTAC 58.324 33.333 0.00 0.00 0.00 2.01
3424 9143 8.804912 TGGGCCGTTTTATCTACTTTTATTTA 57.195 30.769 0.00 0.00 0.00 1.40
3425 9144 7.395206 ACTGGGCCGTTTTATCTACTTTTATTT 59.605 33.333 0.00 0.00 0.00 1.40
3426 9145 6.888088 ACTGGGCCGTTTTATCTACTTTTATT 59.112 34.615 0.00 0.00 0.00 1.40
3427 9146 6.420638 ACTGGGCCGTTTTATCTACTTTTAT 58.579 36.000 0.00 0.00 0.00 1.40
3428 9147 5.807909 ACTGGGCCGTTTTATCTACTTTTA 58.192 37.500 0.00 0.00 0.00 1.52
3429 9148 4.659115 ACTGGGCCGTTTTATCTACTTTT 58.341 39.130 0.00 0.00 0.00 2.27
3430 9149 4.296621 ACTGGGCCGTTTTATCTACTTT 57.703 40.909 0.00 0.00 0.00 2.66
3431 9150 3.994931 ACTGGGCCGTTTTATCTACTT 57.005 42.857 0.00 0.00 0.00 2.24
3432 9151 3.994931 AACTGGGCCGTTTTATCTACT 57.005 42.857 0.00 0.00 0.00 2.57
3433 9152 4.004982 TGAAACTGGGCCGTTTTATCTAC 58.995 43.478 21.41 11.87 37.24 2.59
3434 9153 4.004982 GTGAAACTGGGCCGTTTTATCTA 58.995 43.478 21.41 8.67 37.24 1.98
3435 9154 2.817844 GTGAAACTGGGCCGTTTTATCT 59.182 45.455 21.41 5.38 37.24 1.98
3436 9155 2.413634 CGTGAAACTGGGCCGTTTTATC 60.414 50.000 21.41 13.12 37.24 1.75
3437 9156 1.538075 CGTGAAACTGGGCCGTTTTAT 59.462 47.619 21.41 5.98 37.24 1.40
3438 9157 0.945813 CGTGAAACTGGGCCGTTTTA 59.054 50.000 21.41 16.77 37.24 1.52
3439 9158 1.730451 CCGTGAAACTGGGCCGTTTT 61.730 55.000 21.41 13.34 37.24 2.43
3440 9159 2.190841 CCGTGAAACTGGGCCGTTT 61.191 57.895 20.89 20.89 39.63 3.60
3441 9160 2.593436 CCGTGAAACTGGGCCGTT 60.593 61.111 0.00 3.25 31.75 4.44
3442 9161 3.409605 AACCGTGAAACTGGGCCGT 62.410 57.895 0.00 0.00 35.33 5.68
3443 9162 2.593436 AACCGTGAAACTGGGCCG 60.593 61.111 0.00 0.00 35.33 6.13
3444 9163 1.527380 TGAACCGTGAAACTGGGCC 60.527 57.895 0.00 0.00 35.33 5.80
3445 9164 0.818040 AGTGAACCGTGAAACTGGGC 60.818 55.000 0.00 0.00 35.33 5.36
3446 9165 1.675552 AAGTGAACCGTGAAACTGGG 58.324 50.000 0.00 0.00 35.33 4.45
3447 9166 4.594136 GTTTAAGTGAACCGTGAAACTGG 58.406 43.478 0.00 0.00 36.73 4.00
3448 9167 4.268522 CGTTTAAGTGAACCGTGAAACTG 58.731 43.478 0.00 0.00 31.75 3.16
3449 9168 3.310501 CCGTTTAAGTGAACCGTGAAACT 59.689 43.478 0.00 0.00 31.75 2.66
3450 9169 3.610495 CCGTTTAAGTGAACCGTGAAAC 58.390 45.455 0.00 0.00 0.00 2.78
3451 9170 2.031930 GCCGTTTAAGTGAACCGTGAAA 59.968 45.455 0.00 0.00 0.00 2.69
3452 9171 1.598601 GCCGTTTAAGTGAACCGTGAA 59.401 47.619 0.00 0.00 0.00 3.18
3453 9172 1.219646 GCCGTTTAAGTGAACCGTGA 58.780 50.000 0.00 0.00 0.00 4.35
3454 9173 0.236449 GGCCGTTTAAGTGAACCGTG 59.764 55.000 0.00 0.00 0.00 4.94
3455 9174 0.886043 GGGCCGTTTAAGTGAACCGT 60.886 55.000 0.00 0.00 0.00 4.83
3456 9175 0.885596 TGGGCCGTTTAAGTGAACCG 60.886 55.000 0.00 0.00 0.00 4.44
3457 9176 0.879090 CTGGGCCGTTTAAGTGAACC 59.121 55.000 0.00 0.00 0.00 3.62
3458 9177 1.265905 CACTGGGCCGTTTAAGTGAAC 59.734 52.381 14.09 0.00 42.09 3.18
3459 9178 1.600023 CACTGGGCCGTTTAAGTGAA 58.400 50.000 14.09 0.00 42.09 3.18
3460 9179 0.887387 GCACTGGGCCGTTTAAGTGA 60.887 55.000 21.38 0.00 42.09 3.41
3461 9180 1.579429 GCACTGGGCCGTTTAAGTG 59.421 57.895 14.78 14.78 42.35 3.16
3462 9181 4.074647 GCACTGGGCCGTTTAAGT 57.925 55.556 0.00 0.00 36.11 2.24
3471 9190 5.782893 TTATGTAAATTATGGCACTGGGC 57.217 39.130 0.00 0.00 43.74 5.36
3472 9191 8.037758 TGTTTTTATGTAAATTATGGCACTGGG 58.962 33.333 0.00 0.00 0.00 4.45
3473 9192 8.994429 TGTTTTTATGTAAATTATGGCACTGG 57.006 30.769 0.00 0.00 0.00 4.00
3531 9250 4.178255 CACGACATCGACGCGCAC 62.178 66.667 5.73 0.00 43.02 5.34
3536 9255 4.771356 ACGGCCACGACATCGACG 62.771 66.667 8.54 9.13 44.60 5.12
3537 9256 3.179265 CACGGCCACGACATCGAC 61.179 66.667 8.54 0.00 44.60 4.20
3538 9257 4.429212 CCACGGCCACGACATCGA 62.429 66.667 8.54 0.00 44.60 3.59
3550 9269 2.738521 CACTGAAGACGGCCACGG 60.739 66.667 2.24 0.00 46.48 4.94
3552 9271 3.050275 GCCACTGAAGACGGCCAC 61.050 66.667 2.24 0.00 40.07 5.01
3555 9274 3.050275 GTGGCCACTGAAGACGGC 61.050 66.667 29.12 0.00 45.47 5.68
3556 9275 2.358737 GGTGGCCACTGAAGACGG 60.359 66.667 33.91 0.00 0.00 4.79
3557 9276 2.738521 CGGTGGCCACTGAAGACG 60.739 66.667 37.13 24.96 40.06 4.18
3558 9277 2.358737 CCGGTGGCCACTGAAGAC 60.359 66.667 40.70 20.39 40.06 3.01
3559 9278 2.847234 ACCGGTGGCCACTGAAGA 60.847 61.111 40.70 0.00 40.06 2.87
3560 9279 2.669569 CACCGGTGGCCACTGAAG 60.670 66.667 40.70 28.63 40.06 3.02
3561 9280 3.469863 GACACCGGTGGCCACTGAA 62.470 63.158 40.70 0.00 40.06 3.02
3562 9281 3.936203 GACACCGGTGGCCACTGA 61.936 66.667 40.70 0.01 40.06 3.41
3570 9289 4.318021 ACGACGACGACACCGGTG 62.318 66.667 32.83 32.83 42.66 4.94
3571 9290 4.017877 GACGACGACGACACCGGT 62.018 66.667 15.32 0.00 42.66 5.28
3574 9293 4.380628 AGCGACGACGACGACACC 62.381 66.667 22.94 5.51 42.66 4.16
3575 9294 3.157523 CAGCGACGACGACGACAC 61.158 66.667 22.94 5.86 42.66 3.67
3576 9295 3.340253 TCAGCGACGACGACGACA 61.340 61.111 22.94 2.99 42.66 4.35
3577 9296 2.864248 GTCAGCGACGACGACGAC 60.864 66.667 22.94 12.08 42.66 4.34
3586 9305 2.202324 GTCGACCTCGTCAGCGAC 60.202 66.667 3.51 0.00 44.83 5.19
3587 9306 3.785499 CGTCGACCTCGTCAGCGA 61.785 66.667 10.58 0.00 45.79 4.93
3588 9307 2.613814 CTACGTCGACCTCGTCAGCG 62.614 65.000 10.58 0.00 41.72 5.18
3589 9308 1.060622 CTACGTCGACCTCGTCAGC 59.939 63.158 10.58 0.00 41.72 4.26
3590 9309 0.369589 GACTACGTCGACCTCGTCAG 59.630 60.000 10.58 6.09 41.72 3.51
3591 9310 1.016130 GGACTACGTCGACCTCGTCA 61.016 60.000 20.34 3.44 41.72 4.35
3592 9311 1.712663 GGACTACGTCGACCTCGTC 59.287 63.158 10.58 12.76 41.72 4.20
3593 9312 2.097038 CGGACTACGTCGACCTCGT 61.097 63.158 10.58 7.42 43.86 4.18
3594 9313 1.150567 ATCGGACTACGTCGACCTCG 61.151 60.000 10.58 0.40 44.69 4.63
3595 9314 0.304098 CATCGGACTACGTCGACCTC 59.696 60.000 10.58 0.00 44.69 3.85
3596 9315 1.094073 CCATCGGACTACGTCGACCT 61.094 60.000 10.58 0.34 44.69 3.85
3597 9316 1.354506 CCATCGGACTACGTCGACC 59.645 63.158 10.58 0.00 44.69 4.79
3598 9317 1.298190 GCCATCGGACTACGTCGAC 60.298 63.158 5.18 5.18 44.69 4.20
3599 9318 2.816360 CGCCATCGGACTACGTCGA 61.816 63.158 0.00 0.00 44.69 4.20
3600 9319 2.352001 CGCCATCGGACTACGTCG 60.352 66.667 0.00 0.00 44.69 5.12
3601 9320 1.298190 GACGCCATCGGACTACGTC 60.298 63.158 11.18 11.18 45.10 4.34
3602 9321 2.768492 GGACGCCATCGGACTACGT 61.768 63.158 0.00 0.00 44.69 3.57
3603 9322 2.025727 GGACGCCATCGGACTACG 59.974 66.667 0.00 0.00 46.11 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.