Multiple sequence alignment - TraesCS6A01G277500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G277500 chr6A 100.000 4642 0 0 1 4642 504626293 504621652 0.000000e+00 8573.0
1 TraesCS6A01G277500 chr6A 86.475 244 23 7 1332 1574 504624900 504624666 4.610000e-65 259.0
2 TraesCS6A01G277500 chr6A 86.475 244 23 7 1394 1628 504624962 504624720 4.610000e-65 259.0
3 TraesCS6A01G277500 chr6B 89.223 3164 190 69 1331 4408 548384525 548381427 0.000000e+00 3814.0
4 TraesCS6A01G277500 chr6B 85.613 1550 89 56 166 1628 548385771 548384269 0.000000e+00 1504.0
5 TraesCS6A01G277500 chr6B 86.454 251 24 5 1331 1574 548384462 548384215 2.750000e-67 267.0
6 TraesCS6A01G277500 chr6B 100.000 28 0 0 1025 1052 690976688 690976661 8.000000e-03 52.8
7 TraesCS6A01G277500 chr6D 93.115 1772 68 19 1331 3080 363597293 363595554 0.000000e+00 2547.0
8 TraesCS6A01G277500 chr6D 87.287 1581 95 35 95 1628 363598558 363597037 0.000000e+00 1709.0
9 TraesCS6A01G277500 chr6D 90.164 793 32 14 3261 4028 363595082 363594311 0.000000e+00 990.0
10 TraesCS6A01G277500 chr6D 84.444 405 17 14 4015 4408 363594007 363593638 1.590000e-94 357.0
11 TraesCS6A01G277500 chr6D 84.861 251 28 5 1331 1574 363597230 363596983 1.290000e-60 244.0
12 TraesCS6A01G277500 chr6D 84.409 186 23 3 1335 1520 363597162 363596983 1.330000e-40 178.0
13 TraesCS6A01G277500 chr7A 86.007 879 118 5 1582 2456 194324648 194323771 0.000000e+00 937.0
14 TraesCS6A01G277500 chr7A 79.838 863 148 21 1583 2423 573128270 573127412 1.430000e-169 606.0
15 TraesCS6A01G277500 chr7A 95.455 154 7 0 4406 4559 502668440 502668287 3.590000e-61 246.0
16 TraesCS6A01G277500 chr7D 86.047 860 111 7 1582 2435 189430231 189431087 0.000000e+00 915.0
17 TraesCS6A01G277500 chr7D 80.332 844 144 20 1583 2409 505616503 505615665 1.830000e-173 619.0
18 TraesCS6A01G277500 chr7B 85.438 879 123 4 1582 2456 334322216 334323093 0.000000e+00 909.0
19 TraesCS6A01G277500 chr7B 80.592 845 140 22 1583 2409 533614607 533613769 8.480000e-177 630.0
20 TraesCS6A01G277500 chr5A 99.355 155 1 0 4405 4559 637943573 637943419 9.830000e-72 281.0
21 TraesCS6A01G277500 chr3A 94.737 152 8 0 4406 4557 147484634 147484785 2.160000e-58 237.0
22 TraesCS6A01G277500 chr3A 94.079 152 9 0 4406 4557 428925025 428925176 1.000000e-56 231.0
23 TraesCS6A01G277500 chr2A 94.737 152 8 0 4406 4557 174087670 174087821 2.160000e-58 237.0
24 TraesCS6A01G277500 chr2A 94.079 152 9 0 4406 4557 141595013 141595164 1.000000e-56 231.0
25 TraesCS6A01G277500 chr2A 94.079 152 9 0 4406 4557 517030281 517030432 1.000000e-56 231.0
26 TraesCS6A01G277500 chr2A 93.421 152 10 0 4406 4557 73066140 73066291 4.670000e-55 226.0
27 TraesCS6A01G277500 chr2A 93.421 152 10 0 4406 4557 356571983 356571832 4.670000e-55 226.0
28 TraesCS6A01G277500 chr2A 100.000 28 0 0 4594 4621 48627070 48627043 8.000000e-03 52.8
29 TraesCS6A01G277500 chr1A 91.837 49 3 1 4594 4641 564399993 564400041 3.000000e-07 67.6
30 TraesCS6A01G277500 chr4A 89.583 48 4 1 4591 4637 450335253 450335206 5.020000e-05 60.2
31 TraesCS6A01G277500 chr5B 100.000 30 0 0 4592 4621 40986106 40986135 6.490000e-04 56.5
32 TraesCS6A01G277500 chr5B 94.286 35 2 0 4586 4620 516278060 516278094 2.000000e-03 54.7
33 TraesCS6A01G277500 chr5D 94.444 36 1 1 4591 4625 460657982 460658017 2.000000e-03 54.7
34 TraesCS6A01G277500 chr5D 86.275 51 6 1 4592 4641 478193948 478193998 2.000000e-03 54.7
35 TraesCS6A01G277500 chr3B 92.105 38 3 0 4583 4620 636123754 636123791 2.000000e-03 54.7
36 TraesCS6A01G277500 chr3D 100.000 28 0 0 4592 4619 147842703 147842730 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G277500 chr6A 504621652 504626293 4641 True 3030.333333 8573 90.983333 1 4642 3 chr6A.!!$R1 4641
1 TraesCS6A01G277500 chr6B 548381427 548385771 4344 True 1861.666667 3814 87.096667 166 4408 3 chr6B.!!$R2 4242
2 TraesCS6A01G277500 chr6D 363593638 363598558 4920 True 1004.166667 2547 87.380000 95 4408 6 chr6D.!!$R1 4313
3 TraesCS6A01G277500 chr7A 194323771 194324648 877 True 937.000000 937 86.007000 1582 2456 1 chr7A.!!$R1 874
4 TraesCS6A01G277500 chr7A 573127412 573128270 858 True 606.000000 606 79.838000 1583 2423 1 chr7A.!!$R3 840
5 TraesCS6A01G277500 chr7D 189430231 189431087 856 False 915.000000 915 86.047000 1582 2435 1 chr7D.!!$F1 853
6 TraesCS6A01G277500 chr7D 505615665 505616503 838 True 619.000000 619 80.332000 1583 2409 1 chr7D.!!$R1 826
7 TraesCS6A01G277500 chr7B 334322216 334323093 877 False 909.000000 909 85.438000 1582 2456 1 chr7B.!!$F1 874
8 TraesCS6A01G277500 chr7B 533613769 533614607 838 True 630.000000 630 80.592000 1583 2409 1 chr7B.!!$R1 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.392863 CCAATGTGGTCGCATGAGGA 60.393 55.0 0.0 0.0 31.35 3.71 F
261 265 0.523072 TCCGTCGCTGTACTACAACC 59.477 55.0 0.0 0.0 0.00 3.77 F
827 873 1.041447 AGATAACCAGGACGGACGGG 61.041 60.0 0.0 0.0 38.63 5.28 F
2485 2678 0.104120 CCCGTATCTGTCCATTCGCA 59.896 55.0 0.0 0.0 0.00 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1071 1122 0.910513 CGACGAAGAGCTTGATGTCG 59.089 55.0 14.90 14.9 42.37 4.35 R
1216 1297 2.113243 GAGTTGGCGGAGTGGACCTT 62.113 60.0 0.00 0.0 0.00 3.50 R
2522 2722 0.101219 CTAAATTTGGGAGGCAGCGC 59.899 55.0 0.00 0.0 0.00 5.92 R
4013 4562 0.108585 TCCCTGGTTTGCTGACAGTC 59.891 55.0 3.99 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.450609 AAGCCATAGTTGTCGTCGTT 57.549 45.000 0.00 0.00 0.00 3.85
20 21 1.710013 AGCCATAGTTGTCGTCGTTG 58.290 50.000 0.00 0.00 0.00 4.10
21 22 1.271379 AGCCATAGTTGTCGTCGTTGA 59.729 47.619 0.00 0.00 0.00 3.18
22 23 2.063266 GCCATAGTTGTCGTCGTTGAA 58.937 47.619 0.00 0.00 0.00 2.69
23 24 2.671396 GCCATAGTTGTCGTCGTTGAAT 59.329 45.455 0.00 0.00 0.00 2.57
24 25 3.241995 GCCATAGTTGTCGTCGTTGAATC 60.242 47.826 0.00 0.00 0.00 2.52
25 26 3.306166 CCATAGTTGTCGTCGTTGAATCC 59.694 47.826 0.00 0.00 0.00 3.01
26 27 2.814280 AGTTGTCGTCGTTGAATCCT 57.186 45.000 0.00 0.00 0.00 3.24
27 28 3.107642 AGTTGTCGTCGTTGAATCCTT 57.892 42.857 0.00 0.00 0.00 3.36
28 29 2.800544 AGTTGTCGTCGTTGAATCCTTG 59.199 45.455 0.00 0.00 0.00 3.61
29 30 1.790755 TGTCGTCGTTGAATCCTTGG 58.209 50.000 0.00 0.00 0.00 3.61
30 31 1.341852 TGTCGTCGTTGAATCCTTGGA 59.658 47.619 0.00 0.00 0.00 3.53
31 32 2.028476 TGTCGTCGTTGAATCCTTGGAT 60.028 45.455 0.00 0.00 0.00 3.41
32 33 3.193903 TGTCGTCGTTGAATCCTTGGATA 59.806 43.478 2.20 0.00 0.00 2.59
33 34 4.178540 GTCGTCGTTGAATCCTTGGATAA 58.821 43.478 2.20 0.00 0.00 1.75
34 35 4.628333 GTCGTCGTTGAATCCTTGGATAAA 59.372 41.667 2.20 0.00 0.00 1.40
35 36 5.293569 GTCGTCGTTGAATCCTTGGATAAAT 59.706 40.000 2.20 0.00 0.00 1.40
36 37 5.522460 TCGTCGTTGAATCCTTGGATAAATC 59.478 40.000 2.20 0.00 0.00 2.17
37 38 5.293324 CGTCGTTGAATCCTTGGATAAATCA 59.707 40.000 2.20 0.90 0.00 2.57
38 39 6.183360 CGTCGTTGAATCCTTGGATAAATCAA 60.183 38.462 9.81 9.81 0.00 2.57
39 40 7.535139 GTCGTTGAATCCTTGGATAAATCAAA 58.465 34.615 13.62 1.84 0.00 2.69
40 41 8.026607 GTCGTTGAATCCTTGGATAAATCAAAA 58.973 33.333 13.62 6.09 0.00 2.44
41 42 8.243426 TCGTTGAATCCTTGGATAAATCAAAAG 58.757 33.333 13.62 11.63 0.00 2.27
42 43 7.009540 CGTTGAATCCTTGGATAAATCAAAAGC 59.990 37.037 13.62 5.04 0.00 3.51
43 44 7.479352 TGAATCCTTGGATAAATCAAAAGCA 57.521 32.000 2.20 0.00 0.00 3.91
44 45 7.322664 TGAATCCTTGGATAAATCAAAAGCAC 58.677 34.615 2.20 0.00 0.00 4.40
45 46 5.659440 TCCTTGGATAAATCAAAAGCACC 57.341 39.130 0.00 0.00 0.00 5.01
46 47 4.466015 TCCTTGGATAAATCAAAAGCACCC 59.534 41.667 0.00 0.00 0.00 4.61
47 48 4.423732 CTTGGATAAATCAAAAGCACCCG 58.576 43.478 0.00 0.00 0.00 5.28
48 49 3.691575 TGGATAAATCAAAAGCACCCGA 58.308 40.909 0.00 0.00 0.00 5.14
49 50 3.442273 TGGATAAATCAAAAGCACCCGAC 59.558 43.478 0.00 0.00 0.00 4.79
50 51 3.442273 GGATAAATCAAAAGCACCCGACA 59.558 43.478 0.00 0.00 0.00 4.35
51 52 2.793278 AAATCAAAAGCACCCGACAC 57.207 45.000 0.00 0.00 0.00 3.67
52 53 0.958822 AATCAAAAGCACCCGACACC 59.041 50.000 0.00 0.00 0.00 4.16
53 54 0.893727 ATCAAAAGCACCCGACACCC 60.894 55.000 0.00 0.00 0.00 4.61
54 55 1.826054 CAAAAGCACCCGACACCCA 60.826 57.895 0.00 0.00 0.00 4.51
55 56 1.076632 AAAAGCACCCGACACCCAA 60.077 52.632 0.00 0.00 0.00 4.12
56 57 0.469144 AAAAGCACCCGACACCCAAT 60.469 50.000 0.00 0.00 0.00 3.16
57 58 1.178534 AAAGCACCCGACACCCAATG 61.179 55.000 0.00 0.00 0.00 2.82
66 67 4.001248 CACCCAATGTGGTCGCAT 57.999 55.556 0.00 0.00 41.52 4.73
67 68 1.507630 CACCCAATGTGGTCGCATG 59.492 57.895 0.00 0.00 41.52 4.06
68 69 0.959867 CACCCAATGTGGTCGCATGA 60.960 55.000 0.00 0.00 41.52 3.07
69 70 0.677731 ACCCAATGTGGTCGCATGAG 60.678 55.000 0.00 0.00 35.17 2.90
70 71 1.378882 CCCAATGTGGTCGCATGAGG 61.379 60.000 0.00 4.05 35.17 3.86
71 72 0.392863 CCAATGTGGTCGCATGAGGA 60.393 55.000 0.00 0.00 31.35 3.71
72 73 1.012086 CAATGTGGTCGCATGAGGAG 58.988 55.000 0.00 0.00 0.00 3.69
73 74 0.904649 AATGTGGTCGCATGAGGAGA 59.095 50.000 0.00 0.00 0.00 3.71
74 75 0.904649 ATGTGGTCGCATGAGGAGAA 59.095 50.000 0.00 0.00 0.00 2.87
75 76 0.904649 TGTGGTCGCATGAGGAGAAT 59.095 50.000 0.00 0.00 0.00 2.40
76 77 1.278985 TGTGGTCGCATGAGGAGAATT 59.721 47.619 0.00 0.00 0.00 2.17
77 78 1.936547 GTGGTCGCATGAGGAGAATTC 59.063 52.381 0.00 0.00 0.00 2.17
78 79 1.134401 TGGTCGCATGAGGAGAATTCC 60.134 52.381 0.65 0.00 44.39 3.01
79 80 1.587547 GTCGCATGAGGAGAATTCCC 58.412 55.000 0.65 3.34 45.24 3.97
80 81 1.139853 GTCGCATGAGGAGAATTCCCT 59.860 52.381 13.47 13.47 45.24 4.20
81 82 2.365617 GTCGCATGAGGAGAATTCCCTA 59.634 50.000 13.55 5.51 45.24 3.53
82 83 3.038280 TCGCATGAGGAGAATTCCCTAA 58.962 45.455 13.55 8.49 45.24 2.69
83 84 3.134458 CGCATGAGGAGAATTCCCTAAC 58.866 50.000 13.55 5.49 45.24 2.34
84 85 3.481453 GCATGAGGAGAATTCCCTAACC 58.519 50.000 13.55 5.59 45.24 2.85
85 86 3.137360 GCATGAGGAGAATTCCCTAACCT 59.863 47.826 13.55 9.52 45.24 3.50
86 87 4.745172 GCATGAGGAGAATTCCCTAACCTC 60.745 50.000 13.55 16.12 45.24 3.85
88 89 3.775316 TGAGGAGAATTCCCTAACCTCAC 59.225 47.826 21.06 8.87 45.53 3.51
89 90 4.034410 GAGGAGAATTCCCTAACCTCACT 58.966 47.826 19.07 4.80 45.24 3.41
90 91 3.777522 AGGAGAATTCCCTAACCTCACTG 59.222 47.826 12.31 0.00 45.24 3.66
91 92 3.519913 GGAGAATTCCCTAACCTCACTGT 59.480 47.826 0.65 0.00 37.53 3.55
92 93 4.019231 GGAGAATTCCCTAACCTCACTGTT 60.019 45.833 0.65 0.00 37.53 3.16
93 94 5.189145 GGAGAATTCCCTAACCTCACTGTTA 59.811 44.000 0.65 0.00 37.53 2.41
104 105 3.130693 ACCTCACTGTTATAAGGAGCGTC 59.869 47.826 0.00 0.00 32.99 5.19
107 108 4.995124 TCACTGTTATAAGGAGCGTCTTC 58.005 43.478 0.00 0.00 0.00 2.87
111 112 6.035112 CACTGTTATAAGGAGCGTCTTCTTTC 59.965 42.308 5.84 0.00 31.00 2.62
112 113 5.416947 TGTTATAAGGAGCGTCTTCTTTCC 58.583 41.667 5.84 0.00 31.00 3.13
123 124 2.167487 GTCTTCTTTCCCGCTGAGAGAT 59.833 50.000 0.00 0.00 34.45 2.75
129 130 0.753479 TCCCGCTGAGAGATGTCCTC 60.753 60.000 0.00 0.00 42.28 3.71
152 153 4.737353 CGGAGCGTATACACTGTATACA 57.263 45.455 27.61 5.25 32.28 2.29
153 154 5.099484 CGGAGCGTATACACTGTATACAA 57.901 43.478 27.61 3.79 32.28 2.41
154 155 4.908156 CGGAGCGTATACACTGTATACAAC 59.092 45.833 27.61 21.43 32.28 3.32
182 183 2.399611 GCTATCAACCACGTGCGC 59.600 61.111 10.91 0.00 0.00 6.09
242 243 3.444805 GAGACGAGCCGAGCCACT 61.445 66.667 1.50 0.00 0.00 4.00
255 259 2.991076 GCCACTCCGTCGCTGTACT 61.991 63.158 0.00 0.00 0.00 2.73
258 262 0.800631 CACTCCGTCGCTGTACTACA 59.199 55.000 0.00 0.00 0.00 2.74
260 264 1.198637 ACTCCGTCGCTGTACTACAAC 59.801 52.381 0.00 0.00 0.00 3.32
261 265 0.523072 TCCGTCGCTGTACTACAACC 59.477 55.000 0.00 0.00 0.00 3.77
266 270 2.094675 TCGCTGTACTACAACCCTACC 58.905 52.381 0.00 0.00 0.00 3.18
312 316 4.440127 GTTGCTTGCATGCCCGGG 62.440 66.667 19.09 19.09 0.00 5.73
329 333 1.216710 GGCTCGAGACAGGTCCAAG 59.783 63.158 18.75 0.00 0.00 3.61
330 334 1.446966 GCTCGAGACAGGTCCAAGC 60.447 63.158 18.75 0.00 0.00 4.01
331 335 1.216710 CTCGAGACAGGTCCAAGCC 59.783 63.158 6.58 0.00 0.00 4.35
332 336 1.533033 TCGAGACAGGTCCAAGCCA 60.533 57.895 0.00 0.00 0.00 4.75
333 337 1.079543 CGAGACAGGTCCAAGCCAG 60.080 63.158 0.00 0.00 0.00 4.85
506 524 1.071471 CTCACTCCACCACCACCAC 59.929 63.158 0.00 0.00 0.00 4.16
507 525 2.113139 CACTCCACCACCACCACC 59.887 66.667 0.00 0.00 0.00 4.61
508 526 2.367648 ACTCCACCACCACCACCA 60.368 61.111 0.00 0.00 0.00 4.17
509 527 2.113139 CTCCACCACCACCACCAC 59.887 66.667 0.00 0.00 0.00 4.16
510 528 3.491598 CTCCACCACCACCACCACC 62.492 68.421 0.00 0.00 0.00 4.61
511 529 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
512 530 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
513 531 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
514 532 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
552 570 1.686428 GCCTTCATTTCCTTCCCTCCC 60.686 57.143 0.00 0.00 0.00 4.30
639 679 2.034879 CCGCAGCGTCCAGAACAAT 61.035 57.895 15.05 0.00 0.00 2.71
640 680 1.421485 CGCAGCGTCCAGAACAATC 59.579 57.895 6.65 0.00 0.00 2.67
641 681 1.796796 GCAGCGTCCAGAACAATCC 59.203 57.895 0.00 0.00 0.00 3.01
642 682 1.648467 GCAGCGTCCAGAACAATCCC 61.648 60.000 0.00 0.00 0.00 3.85
766 812 2.350388 GCATCTCGATCGAACCTCTCTC 60.350 54.545 19.92 0.00 0.00 3.20
827 873 1.041447 AGATAACCAGGACGGACGGG 61.041 60.000 0.00 0.00 38.63 5.28
828 874 2.639883 GATAACCAGGACGGACGGGC 62.640 65.000 0.00 0.00 38.63 6.13
852 898 3.387947 GCGGACGGAGGAGGGAAA 61.388 66.667 0.00 0.00 0.00 3.13
853 899 2.893398 CGGACGGAGGAGGGAAAG 59.107 66.667 0.00 0.00 0.00 2.62
854 900 2.585153 GGACGGAGGAGGGAAAGC 59.415 66.667 0.00 0.00 0.00 3.51
973 1024 2.556287 CCGTTTCGGTTGCAGAGC 59.444 61.111 0.00 0.00 42.73 4.09
979 1030 3.414700 CGGTTGCAGAGCCGTGTC 61.415 66.667 15.36 0.00 42.73 3.67
1216 1297 1.373435 CCCCTCGCCAACAACACTA 59.627 57.895 0.00 0.00 0.00 2.74
1262 1343 1.805945 CCGACGCAGCTACCAAGAC 60.806 63.158 0.00 0.00 0.00 3.01
1806 1995 0.621571 AGGCCTACAAGATCCTGCCA 60.622 55.000 1.29 0.00 41.33 4.92
2361 2550 4.087892 CTGGACCAGGTGCTCGGG 62.088 72.222 14.26 0.00 36.74 5.14
2439 2628 1.000145 GCGTCAAGAATCCGAGGAAC 59.000 55.000 0.00 0.00 0.00 3.62
2460 2653 5.862924 ACGATTACTCAAGGTTTGTGATG 57.137 39.130 0.00 0.00 0.00 3.07
2484 2677 0.387929 TCCCGTATCTGTCCATTCGC 59.612 55.000 0.00 0.00 0.00 4.70
2485 2678 0.104120 CCCGTATCTGTCCATTCGCA 59.896 55.000 0.00 0.00 0.00 5.10
2522 2722 2.481903 TGATTGCGAGATCTCTGTCG 57.518 50.000 20.26 9.30 40.87 4.35
2526 2726 2.712539 CGAGATCTCTGTCGCGCT 59.287 61.111 20.26 0.00 34.85 5.92
2555 2755 5.652014 CCCAAATTTAGCTTCAGGTGTATCA 59.348 40.000 0.00 0.00 0.00 2.15
2585 2788 6.267928 CAGGCTGGTAGTAAATACTCCTACAT 59.732 42.308 6.61 0.00 37.73 2.29
2597 2800 8.928270 AAATACTCCTACATTTTGTCTCTACG 57.072 34.615 0.00 0.00 0.00 3.51
2606 2809 3.564053 TTTGTCTCTACGGGTTTGGTT 57.436 42.857 0.00 0.00 0.00 3.67
2616 2819 0.321346 GGGTTTGGTTGCATTCCCAG 59.679 55.000 6.08 0.00 35.43 4.45
2624 2833 7.232534 GGTTTGGTTGCATTCCCAGATATATAA 59.767 37.037 6.08 0.00 31.04 0.98
2705 2916 6.402226 GCAGTTACTACTTGTTTATGCAGTCC 60.402 42.308 0.00 0.00 32.67 3.85
2725 2936 1.336440 CGTTGAACAATTGGGCACTGA 59.664 47.619 10.83 0.00 0.00 3.41
2749 2960 0.508641 CTTGAGTTCGACCTTGCACG 59.491 55.000 0.00 0.00 0.00 5.34
2828 3043 0.240945 CATGGCGGTTGACACCTTTC 59.759 55.000 0.00 0.00 41.64 2.62
2853 3068 5.047519 CCTTTTGTTCTCCAGCTTTCATCAT 60.048 40.000 0.00 0.00 0.00 2.45
2963 3178 7.277174 ACTTTTAAGACATTTGGTTCTCCAG 57.723 36.000 0.00 0.00 45.22 3.86
2989 3204 2.420628 TCGCTGTTGAGCCAAAAATG 57.579 45.000 0.00 0.00 42.91 2.32
3087 3384 8.421673 CTGAGGCAAAAACCTTAGTAGTATAC 57.578 38.462 0.00 0.00 41.32 1.47
3132 3431 4.530857 CGCCTTCTACCGGCCTGG 62.531 72.222 0.00 11.48 44.73 4.45
3150 3449 5.166398 GCCTGGAAACAAAGATGAATTGAG 58.834 41.667 0.00 0.00 42.06 3.02
3162 3490 7.814264 AAGATGAATTGAGCCCAGTAAATAG 57.186 36.000 0.00 0.00 0.00 1.73
3170 3498 4.644685 TGAGCCCAGTAAATAGAATTTGCC 59.355 41.667 0.00 0.00 0.00 4.52
3173 3501 6.431722 AGCCCAGTAAATAGAATTTGCCTTA 58.568 36.000 0.00 0.00 0.00 2.69
3185 3513 7.649533 AGAATTTGCCTTATTCATCATGACA 57.350 32.000 0.00 0.00 35.04 3.58
3186 3514 7.486647 AGAATTTGCCTTATTCATCATGACAC 58.513 34.615 0.00 0.00 35.04 3.67
3199 3685 9.793252 ATTCATCATGACACTAAATTTTAGCAC 57.207 29.630 14.67 8.00 0.00 4.40
3208 3694 7.996385 ACACTAAATTTTAGCACAGTCTTTGT 58.004 30.769 14.67 6.73 41.94 2.83
3212 3698 9.387123 CTAAATTTTAGCACAGTCTTTGTCTTC 57.613 33.333 3.33 0.00 38.16 2.87
3213 3699 6.942532 ATTTTAGCACAGTCTTTGTCTTCA 57.057 33.333 0.00 0.00 38.16 3.02
3233 3719 9.897744 GTCTTCATTGTTGATCTTACATTTCAA 57.102 29.630 0.00 0.00 0.00 2.69
3252 3761 9.935682 CATTTCAAACTAATACATAGCAACGAT 57.064 29.630 0.00 0.00 34.78 3.73
3255 3764 8.487313 TCAAACTAATACATAGCAACGATGTT 57.513 30.769 0.00 0.00 38.47 2.71
3259 3768 9.982651 AACTAATACATAGCAACGATGTTATCT 57.017 29.630 0.00 0.00 38.47 1.98
3263 3772 6.589830 ACATAGCAACGATGTTATCTGAAC 57.410 37.500 0.00 0.00 33.70 3.18
3264 3773 6.341316 ACATAGCAACGATGTTATCTGAACT 58.659 36.000 0.00 0.00 33.70 3.01
3266 3775 7.979537 ACATAGCAACGATGTTATCTGAACTAA 59.020 33.333 0.00 0.00 33.70 2.24
3267 3776 6.648725 AGCAACGATGTTATCTGAACTAAC 57.351 37.500 0.00 0.00 0.00 2.34
3411 3926 1.506309 GGTGCACATGTCGCAGAACA 61.506 55.000 20.43 0.00 40.78 3.18
3483 3998 1.134220 ACCACAACTCCATCAACGTGT 60.134 47.619 0.00 0.00 0.00 4.49
3488 4003 0.472471 ACTCCATCAACGTGTTGGGT 59.528 50.000 12.43 6.11 37.71 4.51
3640 4155 2.287103 TCGGATCGTCGTCTCTTACATG 59.713 50.000 0.00 0.00 0.00 3.21
3644 4159 5.333875 CGGATCGTCGTCTCTTACATGATAA 60.334 44.000 0.00 0.00 0.00 1.75
3645 4160 6.613233 GGATCGTCGTCTCTTACATGATAAT 58.387 40.000 0.00 0.00 0.00 1.28
3646 4161 7.085116 GGATCGTCGTCTCTTACATGATAATT 58.915 38.462 0.00 0.00 0.00 1.40
3705 4224 3.320826 TGCTGGTACATATACGCTGATGT 59.679 43.478 0.00 2.70 38.20 3.06
3725 4246 8.050778 TGATGTTTTATTTAGGATGTGTGGAC 57.949 34.615 0.00 0.00 0.00 4.02
3726 4247 7.888021 TGATGTTTTATTTAGGATGTGTGGACT 59.112 33.333 0.00 0.00 0.00 3.85
3727 4248 7.447374 TGTTTTATTTAGGATGTGTGGACTG 57.553 36.000 0.00 0.00 0.00 3.51
3728 4249 6.432783 TGTTTTATTTAGGATGTGTGGACTGG 59.567 38.462 0.00 0.00 0.00 4.00
3729 4250 6.381498 TTTATTTAGGATGTGTGGACTGGA 57.619 37.500 0.00 0.00 0.00 3.86
3730 4251 3.981071 TTTAGGATGTGTGGACTGGAG 57.019 47.619 0.00 0.00 0.00 3.86
3731 4252 2.919772 TAGGATGTGTGGACTGGAGA 57.080 50.000 0.00 0.00 0.00 3.71
3747 4268 7.234782 TGGACTGGAGAGTCTGTTTTATTAGAA 59.765 37.037 0.00 0.00 46.96 2.10
3748 4269 7.762159 GGACTGGAGAGTCTGTTTTATTAGAAG 59.238 40.741 0.00 0.00 46.96 2.85
3749 4270 8.423906 ACTGGAGAGTCTGTTTTATTAGAAGA 57.576 34.615 0.00 0.00 0.00 2.87
3783 4304 4.276460 CGGTGTAAAGTTTTGGTTCTTCG 58.724 43.478 0.00 0.00 0.00 3.79
3790 4311 0.747852 TTTTGGTTCTTCGTTGGGCC 59.252 50.000 0.00 0.00 0.00 5.80
3846 4380 3.796717 CGTTTTCTTCACCTTTTTCTGCC 59.203 43.478 0.00 0.00 0.00 4.85
3859 4393 1.434513 TTCTGCCTGTCCCCCACATT 61.435 55.000 0.00 0.00 33.23 2.71
3865 4399 1.003812 CCTGTCCCCCACATTCGTTTA 59.996 52.381 0.00 0.00 33.23 2.01
3866 4400 2.081462 CTGTCCCCCACATTCGTTTAC 58.919 52.381 0.00 0.00 33.23 2.01
3901 4435 4.937620 TGTAGACTGATGATGTTGGCTTTC 59.062 41.667 0.00 0.00 0.00 2.62
3978 4521 1.604278 AGTGAGGCGTTTCTGCTTTTC 59.396 47.619 0.00 0.00 34.52 2.29
4003 4552 8.015087 TCGTTGTTACATCATTTGTGATCTTTC 58.985 33.333 0.00 0.00 39.48 2.62
4013 4562 0.798776 GTGATCTTTCTGGCCGTGTG 59.201 55.000 0.00 0.00 0.00 3.82
4039 4905 2.046285 GCAAACCAGGGACGATGGG 61.046 63.158 0.00 0.00 42.48 4.00
4055 4921 2.046604 GGTCGAAACCGGGAAGGG 60.047 66.667 6.32 0.00 46.96 3.95
4056 4922 2.586293 GGTCGAAACCGGGAAGGGA 61.586 63.158 6.32 0.00 46.96 4.20
4057 4923 1.372307 GTCGAAACCGGGAAGGGAA 59.628 57.895 6.32 0.00 46.96 3.97
4092 4958 3.068448 TCTTTTCCGGGTTAGGCAAAAAC 59.932 43.478 0.00 0.00 0.00 2.43
4136 5002 3.438087 CAGATTTCGATTGCAACAGGTCT 59.562 43.478 0.00 0.00 0.00 3.85
4137 5003 3.438087 AGATTTCGATTGCAACAGGTCTG 59.562 43.478 0.00 0.00 0.00 3.51
4138 5004 0.874390 TTCGATTGCAACAGGTCTGC 59.126 50.000 0.00 0.00 40.35 4.26
4139 5005 0.955428 TCGATTGCAACAGGTCTGCC 60.955 55.000 0.00 0.00 39.13 4.85
4174 5044 2.191641 GATGGGCCTGAGACTGGC 59.808 66.667 4.53 10.41 45.73 4.85
4226 5096 0.792640 GAATGATAGCGCGTGATGGG 59.207 55.000 8.43 0.00 0.00 4.00
4266 5137 2.585869 CGCGCGCGTTGGATAGATT 61.586 57.895 42.49 0.00 34.35 2.40
4271 5146 1.461127 GCGCGTTGGATAGATTGATCC 59.539 52.381 8.43 0.00 45.06 3.36
4382 5267 1.689813 GATTGGTTCACGGGGGTTTTT 59.310 47.619 0.00 0.00 0.00 1.94
4408 5293 2.186903 GCCGCCTTCCAAGATCGA 59.813 61.111 0.00 0.00 0.00 3.59
4409 5294 1.449601 GCCGCCTTCCAAGATCGAA 60.450 57.895 0.00 0.00 0.00 3.71
4410 5295 1.432270 GCCGCCTTCCAAGATCGAAG 61.432 60.000 0.00 2.75 37.14 3.79
4411 5296 1.432270 CCGCCTTCCAAGATCGAAGC 61.432 60.000 0.00 0.00 36.26 3.86
4412 5297 0.460987 CGCCTTCCAAGATCGAAGCT 60.461 55.000 0.00 0.00 36.26 3.74
4413 5298 1.202417 CGCCTTCCAAGATCGAAGCTA 60.202 52.381 0.00 0.00 36.26 3.32
4414 5299 2.205911 GCCTTCCAAGATCGAAGCTAC 58.794 52.381 0.00 0.00 36.26 3.58
4415 5300 2.159028 GCCTTCCAAGATCGAAGCTACT 60.159 50.000 0.00 0.00 36.26 2.57
4416 5301 3.068307 GCCTTCCAAGATCGAAGCTACTA 59.932 47.826 0.00 0.00 36.26 1.82
4417 5302 4.612943 CCTTCCAAGATCGAAGCTACTAC 58.387 47.826 0.00 0.00 36.26 2.73
4418 5303 3.965292 TCCAAGATCGAAGCTACTACG 57.035 47.619 0.00 0.00 0.00 3.51
4419 5304 2.033049 TCCAAGATCGAAGCTACTACGC 59.967 50.000 0.00 0.00 0.00 4.42
4420 5305 2.223502 CCAAGATCGAAGCTACTACGCA 60.224 50.000 0.00 0.00 0.00 5.24
4421 5306 3.039405 CAAGATCGAAGCTACTACGCAG 58.961 50.000 0.00 0.00 0.00 5.18
4422 5307 2.562635 AGATCGAAGCTACTACGCAGA 58.437 47.619 0.00 0.00 0.00 4.26
4423 5308 2.546368 AGATCGAAGCTACTACGCAGAG 59.454 50.000 0.00 0.00 0.00 3.35
4424 5309 1.015109 TCGAAGCTACTACGCAGAGG 58.985 55.000 0.00 0.00 0.00 3.69
4425 5310 1.015109 CGAAGCTACTACGCAGAGGA 58.985 55.000 0.00 0.00 0.00 3.71
4426 5311 1.604755 CGAAGCTACTACGCAGAGGAT 59.395 52.381 0.00 0.00 0.00 3.24
4427 5312 2.806818 CGAAGCTACTACGCAGAGGATA 59.193 50.000 0.00 0.00 0.00 2.59
4428 5313 3.364167 CGAAGCTACTACGCAGAGGATAC 60.364 52.174 0.00 0.00 0.00 2.24
4444 5329 4.585619 GGATACTTGCTCAGACGAAAAC 57.414 45.455 0.00 0.00 0.00 2.43
4445 5330 4.246458 GGATACTTGCTCAGACGAAAACT 58.754 43.478 0.00 0.00 0.00 2.66
4446 5331 4.092091 GGATACTTGCTCAGACGAAAACTG 59.908 45.833 0.00 0.00 36.80 3.16
4447 5332 2.213499 ACTTGCTCAGACGAAAACTGG 58.787 47.619 0.00 0.00 36.22 4.00
4448 5333 2.158957 ACTTGCTCAGACGAAAACTGGA 60.159 45.455 0.00 0.00 36.22 3.86
4449 5334 1.865865 TGCTCAGACGAAAACTGGAC 58.134 50.000 0.00 0.00 36.22 4.02
4450 5335 0.784778 GCTCAGACGAAAACTGGACG 59.215 55.000 0.00 0.00 36.22 4.79
4451 5336 1.602165 GCTCAGACGAAAACTGGACGA 60.602 52.381 0.00 0.00 36.22 4.20
4452 5337 2.927014 GCTCAGACGAAAACTGGACGAT 60.927 50.000 0.00 0.00 36.22 3.73
4453 5338 2.663602 CTCAGACGAAAACTGGACGATG 59.336 50.000 0.00 0.00 36.22 3.84
4454 5339 1.726791 CAGACGAAAACTGGACGATGG 59.273 52.381 0.00 0.00 0.00 3.51
4455 5340 1.343465 AGACGAAAACTGGACGATGGT 59.657 47.619 0.00 0.00 0.00 3.55
4456 5341 1.459592 GACGAAAACTGGACGATGGTG 59.540 52.381 0.00 0.00 0.00 4.17
4457 5342 1.069513 ACGAAAACTGGACGATGGTGA 59.930 47.619 0.00 0.00 0.00 4.02
4458 5343 2.139917 CGAAAACTGGACGATGGTGAA 58.860 47.619 0.00 0.00 0.00 3.18
4459 5344 2.742053 CGAAAACTGGACGATGGTGAAT 59.258 45.455 0.00 0.00 0.00 2.57
4460 5345 3.181520 CGAAAACTGGACGATGGTGAATC 60.182 47.826 0.00 0.00 0.00 2.52
4461 5346 2.403252 AACTGGACGATGGTGAATCC 57.597 50.000 0.00 0.00 30.80 3.01
4473 5358 3.540617 TGGTGAATCCATTGGTATGTCG 58.459 45.455 1.86 0.00 41.93 4.35
4474 5359 3.054728 TGGTGAATCCATTGGTATGTCGT 60.055 43.478 1.86 0.00 41.93 4.34
4475 5360 4.162509 TGGTGAATCCATTGGTATGTCGTA 59.837 41.667 1.86 0.00 41.93 3.43
4476 5361 4.750098 GGTGAATCCATTGGTATGTCGTAG 59.250 45.833 1.86 0.00 35.97 3.51
4477 5362 5.357257 GTGAATCCATTGGTATGTCGTAGT 58.643 41.667 1.86 0.00 0.00 2.73
4478 5363 5.815740 GTGAATCCATTGGTATGTCGTAGTT 59.184 40.000 1.86 0.00 0.00 2.24
4479 5364 6.315393 GTGAATCCATTGGTATGTCGTAGTTT 59.685 38.462 1.86 0.00 0.00 2.66
4480 5365 6.315144 TGAATCCATTGGTATGTCGTAGTTTG 59.685 38.462 1.86 0.00 0.00 2.93
4481 5366 3.936453 TCCATTGGTATGTCGTAGTTTGC 59.064 43.478 1.86 0.00 0.00 3.68
4482 5367 3.938963 CCATTGGTATGTCGTAGTTTGCT 59.061 43.478 0.00 0.00 0.00 3.91
4483 5368 4.034048 CCATTGGTATGTCGTAGTTTGCTC 59.966 45.833 0.00 0.00 0.00 4.26
4484 5369 3.945981 TGGTATGTCGTAGTTTGCTCA 57.054 42.857 0.00 0.00 0.00 4.26
4485 5370 4.465632 TGGTATGTCGTAGTTTGCTCAT 57.534 40.909 0.00 0.00 0.00 2.90
4486 5371 5.585820 TGGTATGTCGTAGTTTGCTCATA 57.414 39.130 0.00 0.00 0.00 2.15
4487 5372 5.588240 TGGTATGTCGTAGTTTGCTCATAG 58.412 41.667 0.00 0.00 0.00 2.23
4488 5373 4.982916 GGTATGTCGTAGTTTGCTCATAGG 59.017 45.833 0.00 0.00 0.00 2.57
4489 5374 4.737855 ATGTCGTAGTTTGCTCATAGGT 57.262 40.909 0.00 0.00 0.00 3.08
4490 5375 5.847111 ATGTCGTAGTTTGCTCATAGGTA 57.153 39.130 0.00 0.00 0.00 3.08
4491 5376 5.847111 TGTCGTAGTTTGCTCATAGGTAT 57.153 39.130 0.00 0.00 0.00 2.73
4492 5377 5.588240 TGTCGTAGTTTGCTCATAGGTATG 58.412 41.667 0.00 0.00 35.04 2.39
4493 5378 4.982916 GTCGTAGTTTGCTCATAGGTATGG 59.017 45.833 0.00 0.00 34.50 2.74
4494 5379 4.891168 TCGTAGTTTGCTCATAGGTATGGA 59.109 41.667 0.00 0.00 34.50 3.41
4495 5380 4.982916 CGTAGTTTGCTCATAGGTATGGAC 59.017 45.833 0.00 0.00 34.50 4.02
4496 5381 4.060038 AGTTTGCTCATAGGTATGGACG 57.940 45.455 0.00 0.00 34.50 4.79
4497 5382 3.131396 GTTTGCTCATAGGTATGGACGG 58.869 50.000 0.00 0.00 34.50 4.79
4498 5383 0.679505 TGCTCATAGGTATGGACGGC 59.320 55.000 0.00 0.00 34.50 5.68
4499 5384 0.969894 GCTCATAGGTATGGACGGCT 59.030 55.000 0.00 0.00 34.50 5.52
4500 5385 1.344763 GCTCATAGGTATGGACGGCTT 59.655 52.381 0.00 0.00 34.50 4.35
4501 5386 2.868044 GCTCATAGGTATGGACGGCTTG 60.868 54.545 0.00 0.00 34.50 4.01
4502 5387 2.628178 CTCATAGGTATGGACGGCTTGA 59.372 50.000 0.00 0.00 34.50 3.02
4503 5388 3.239449 TCATAGGTATGGACGGCTTGAT 58.761 45.455 0.00 0.00 34.50 2.57
4504 5389 3.646162 TCATAGGTATGGACGGCTTGATT 59.354 43.478 0.00 0.00 34.50 2.57
4505 5390 4.836175 TCATAGGTATGGACGGCTTGATTA 59.164 41.667 0.00 0.00 34.50 1.75
4506 5391 3.753294 AGGTATGGACGGCTTGATTAG 57.247 47.619 0.00 0.00 0.00 1.73
4507 5392 8.464179 TCATAGGTATGGACGGCTTGATTAGC 62.464 46.154 0.00 0.00 40.38 3.09
4525 5410 3.935133 CACTGTCGTGCAAGAATCG 57.065 52.632 3.20 0.00 33.82 3.34
4526 5411 1.139989 CACTGTCGTGCAAGAATCGT 58.860 50.000 3.20 0.00 33.82 3.73
4527 5412 1.136529 CACTGTCGTGCAAGAATCGTG 60.137 52.381 3.20 8.17 33.82 4.35
4528 5413 0.179240 CTGTCGTGCAAGAATCGTGC 60.179 55.000 14.04 14.04 42.55 5.34
4532 5417 3.667087 TGCAAGAATCGTGCACCC 58.333 55.556 19.18 0.00 46.76 4.61
4533 5418 1.073025 TGCAAGAATCGTGCACCCT 59.927 52.632 19.18 0.39 46.76 4.34
4534 5419 1.236616 TGCAAGAATCGTGCACCCTG 61.237 55.000 19.18 0.00 46.76 4.45
4535 5420 0.955428 GCAAGAATCGTGCACCCTGA 60.955 55.000 15.86 2.97 41.80 3.86
4536 5421 1.081892 CAAGAATCGTGCACCCTGAG 58.918 55.000 12.15 0.00 0.00 3.35
4537 5422 0.687354 AAGAATCGTGCACCCTGAGT 59.313 50.000 12.15 1.57 0.00 3.41
4538 5423 0.247736 AGAATCGTGCACCCTGAGTC 59.752 55.000 12.15 11.60 0.00 3.36
4539 5424 1.078759 GAATCGTGCACCCTGAGTCG 61.079 60.000 12.15 0.00 0.00 4.18
4540 5425 1.816863 AATCGTGCACCCTGAGTCGT 61.817 55.000 12.15 0.00 0.00 4.34
4541 5426 2.214181 ATCGTGCACCCTGAGTCGTC 62.214 60.000 12.15 0.00 0.00 4.20
4542 5427 2.920645 CGTGCACCCTGAGTCGTCT 61.921 63.158 12.15 0.00 0.00 4.18
4543 5428 1.373497 GTGCACCCTGAGTCGTCTG 60.373 63.158 5.22 0.00 0.00 3.51
4544 5429 2.433318 GCACCCTGAGTCGTCTGC 60.433 66.667 0.00 0.00 0.00 4.26
4545 5430 3.051210 CACCCTGAGTCGTCTGCA 58.949 61.111 0.00 0.00 0.00 4.41
4546 5431 1.593787 CACCCTGAGTCGTCTGCAT 59.406 57.895 0.00 0.00 0.00 3.96
4547 5432 0.817654 CACCCTGAGTCGTCTGCATA 59.182 55.000 0.00 0.00 0.00 3.14
4548 5433 1.107114 ACCCTGAGTCGTCTGCATAG 58.893 55.000 0.00 0.00 0.00 2.23
4549 5434 0.249238 CCCTGAGTCGTCTGCATAGC 60.249 60.000 0.00 0.00 0.00 2.97
4550 5435 0.457443 CCTGAGTCGTCTGCATAGCA 59.543 55.000 0.00 0.00 36.92 3.49
4559 5444 4.115279 TGCATAGCAGCGCTCTTC 57.885 55.556 7.13 0.00 40.44 2.87
4560 5445 1.522355 TGCATAGCAGCGCTCTTCC 60.522 57.895 7.13 0.00 40.44 3.46
4561 5446 1.522355 GCATAGCAGCGCTCTTCCA 60.522 57.895 7.13 0.00 40.44 3.53
4562 5447 1.091771 GCATAGCAGCGCTCTTCCAA 61.092 55.000 7.13 0.00 40.44 3.53
4563 5448 0.935898 CATAGCAGCGCTCTTCCAAG 59.064 55.000 7.13 0.00 40.44 3.61
4564 5449 0.826715 ATAGCAGCGCTCTTCCAAGA 59.173 50.000 7.13 0.00 40.44 3.02
4565 5450 0.826715 TAGCAGCGCTCTTCCAAGAT 59.173 50.000 7.13 0.00 40.44 2.40
4566 5451 0.461693 AGCAGCGCTCTTCCAAGATC 60.462 55.000 7.13 0.00 30.62 2.75
4567 5452 1.760268 GCAGCGCTCTTCCAAGATCG 61.760 60.000 7.13 7.96 44.77 3.69
4568 5453 1.142748 AGCGCTCTTCCAAGATCGG 59.857 57.895 2.64 0.00 42.89 4.18
4569 5454 1.153549 GCGCTCTTCCAAGATCGGT 60.154 57.895 12.96 0.00 42.89 4.69
4570 5455 1.424493 GCGCTCTTCCAAGATCGGTG 61.424 60.000 12.96 0.36 42.89 4.94
4571 5456 1.424493 CGCTCTTCCAAGATCGGTGC 61.424 60.000 4.93 0.00 40.03 5.01
4572 5457 0.107945 GCTCTTCCAAGATCGGTGCT 60.108 55.000 0.00 0.00 33.93 4.40
4573 5458 1.933247 CTCTTCCAAGATCGGTGCTC 58.067 55.000 0.00 0.00 33.93 4.26
4574 5459 1.480137 CTCTTCCAAGATCGGTGCTCT 59.520 52.381 0.00 0.00 33.93 4.09
4575 5460 1.205655 TCTTCCAAGATCGGTGCTCTG 59.794 52.381 0.00 0.00 0.00 3.35
4576 5461 0.976641 TTCCAAGATCGGTGCTCTGT 59.023 50.000 0.00 0.00 0.00 3.41
4577 5462 0.247460 TCCAAGATCGGTGCTCTGTG 59.753 55.000 0.00 0.00 0.00 3.66
4578 5463 1.364626 CCAAGATCGGTGCTCTGTGC 61.365 60.000 0.00 0.00 43.25 4.57
4587 5472 3.181367 GCTCTGTGCATTCCACCG 58.819 61.111 0.00 0.00 44.01 4.94
4588 5473 3.044059 GCTCTGTGCATTCCACCGC 62.044 63.158 0.00 0.00 44.01 5.68
4589 5474 1.672030 CTCTGTGCATTCCACCGCA 60.672 57.895 0.00 0.00 44.01 5.69
4603 5488 2.762616 CGCACGCGGCAAAATTTC 59.237 55.556 12.47 0.00 45.17 2.17
4604 5489 2.762616 GCACGCGGCAAAATTTCG 59.237 55.556 12.47 0.00 43.97 3.46
4605 5490 2.014018 GCACGCGGCAAAATTTCGT 61.014 52.632 12.47 0.00 43.97 3.85
4606 5491 1.766176 CACGCGGCAAAATTTCGTG 59.234 52.632 12.47 12.93 43.19 4.35
4607 5492 0.932585 CACGCGGCAAAATTTCGTGT 60.933 50.000 12.47 13.69 46.41 4.49
4608 5493 0.248702 ACGCGGCAAAATTTCGTGTT 60.249 45.000 12.47 0.00 43.66 3.32
4609 5494 0.849579 CGCGGCAAAATTTCGTGTTT 59.150 45.000 0.00 0.00 0.00 2.83
4610 5495 1.256635 CGCGGCAAAATTTCGTGTTTT 59.743 42.857 0.00 0.00 0.00 2.43
4611 5496 2.623705 GCGGCAAAATTTCGTGTTTTG 58.376 42.857 14.02 14.02 45.01 2.44
4612 5497 2.282820 GCGGCAAAATTTCGTGTTTTGA 59.717 40.909 19.19 0.00 45.02 2.69
4613 5498 3.839600 GCGGCAAAATTTCGTGTTTTGAC 60.840 43.478 19.19 16.78 46.27 3.18
4614 5499 3.302156 CGGCAAAATTTCGTGTTTTGACC 60.302 43.478 19.19 17.44 46.77 4.02
4615 5500 3.868661 GGCAAAATTTCGTGTTTTGACCT 59.131 39.130 19.19 0.00 44.81 3.85
4616 5501 4.331443 GGCAAAATTTCGTGTTTTGACCTT 59.669 37.500 19.19 0.00 44.81 3.50
4617 5502 5.163804 GGCAAAATTTCGTGTTTTGACCTTT 60.164 36.000 19.19 0.00 44.81 3.11
4618 5503 6.310960 GCAAAATTTCGTGTTTTGACCTTTT 58.689 32.000 19.19 0.00 45.02 2.27
4619 5504 6.799441 GCAAAATTTCGTGTTTTGACCTTTTT 59.201 30.769 19.19 0.00 45.02 1.94
4620 5505 7.007009 GCAAAATTTCGTGTTTTGACCTTTTTC 59.993 33.333 19.19 3.62 45.02 2.29
4621 5506 5.942325 ATTTCGTGTTTTGACCTTTTTCG 57.058 34.783 0.00 0.00 0.00 3.46
4622 5507 4.681835 TTCGTGTTTTGACCTTTTTCGA 57.318 36.364 0.00 0.00 0.00 3.71
4623 5508 4.886247 TCGTGTTTTGACCTTTTTCGAT 57.114 36.364 0.00 0.00 0.00 3.59
4624 5509 5.987777 TCGTGTTTTGACCTTTTTCGATA 57.012 34.783 0.00 0.00 0.00 2.92
4625 5510 5.740406 TCGTGTTTTGACCTTTTTCGATAC 58.260 37.500 0.00 0.00 0.00 2.24
4626 5511 4.907582 CGTGTTTTGACCTTTTTCGATACC 59.092 41.667 0.00 0.00 0.00 2.73
4627 5512 5.277634 CGTGTTTTGACCTTTTTCGATACCT 60.278 40.000 0.00 0.00 0.00 3.08
4628 5513 6.073657 CGTGTTTTGACCTTTTTCGATACCTA 60.074 38.462 0.00 0.00 0.00 3.08
4629 5514 7.360607 CGTGTTTTGACCTTTTTCGATACCTAT 60.361 37.037 0.00 0.00 0.00 2.57
4630 5515 8.294577 GTGTTTTGACCTTTTTCGATACCTATT 58.705 33.333 0.00 0.00 0.00 1.73
4631 5516 8.508875 TGTTTTGACCTTTTTCGATACCTATTC 58.491 33.333 0.00 0.00 0.00 1.75
4632 5517 6.897259 TTGACCTTTTTCGATACCTATTCG 57.103 37.500 0.00 0.00 0.00 3.34
4633 5518 6.211587 TGACCTTTTTCGATACCTATTCGA 57.788 37.500 0.00 0.00 0.00 3.71
4634 5519 6.270815 TGACCTTTTTCGATACCTATTCGAG 58.729 40.000 0.00 0.00 37.20 4.04
4635 5520 6.095860 TGACCTTTTTCGATACCTATTCGAGA 59.904 38.462 0.00 0.00 37.20 4.04
4636 5521 7.052142 ACCTTTTTCGATACCTATTCGAGAT 57.948 36.000 0.00 0.00 37.20 2.75
4637 5522 7.498443 ACCTTTTTCGATACCTATTCGAGATT 58.502 34.615 0.00 0.00 37.20 2.40
4638 5523 7.985752 ACCTTTTTCGATACCTATTCGAGATTT 59.014 33.333 0.00 0.00 37.20 2.17
4639 5524 8.276325 CCTTTTTCGATACCTATTCGAGATTTG 58.724 37.037 0.00 0.00 37.20 2.32
4640 5525 8.936070 TTTTTCGATACCTATTCGAGATTTGA 57.064 30.769 0.00 0.00 37.20 2.69
4641 5526 9.542462 TTTTTCGATACCTATTCGAGATTTGAT 57.458 29.630 0.00 0.00 37.20 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.066262 CAACGACGACAACTATGGCTT 58.934 47.619 0.00 0.00 29.70 4.35
1 2 1.271379 TCAACGACGACAACTATGGCT 59.729 47.619 0.00 0.00 29.70 4.75
2 3 1.705256 TCAACGACGACAACTATGGC 58.295 50.000 0.00 0.00 0.00 4.40
3 4 3.306166 GGATTCAACGACGACAACTATGG 59.694 47.826 0.00 0.00 0.00 2.74
4 5 4.174009 AGGATTCAACGACGACAACTATG 58.826 43.478 0.00 0.00 0.00 2.23
5 6 4.451629 AGGATTCAACGACGACAACTAT 57.548 40.909 0.00 0.00 0.00 2.12
6 7 3.928727 AGGATTCAACGACGACAACTA 57.071 42.857 0.00 0.00 0.00 2.24
7 8 2.800544 CAAGGATTCAACGACGACAACT 59.199 45.455 0.00 0.00 0.00 3.16
8 9 2.096417 CCAAGGATTCAACGACGACAAC 60.096 50.000 0.00 0.00 0.00 3.32
9 10 2.139917 CCAAGGATTCAACGACGACAA 58.860 47.619 0.00 0.00 0.00 3.18
10 11 1.341852 TCCAAGGATTCAACGACGACA 59.658 47.619 0.00 0.00 0.00 4.35
11 12 2.074547 TCCAAGGATTCAACGACGAC 57.925 50.000 0.00 0.00 0.00 4.34
12 13 4.459390 TTATCCAAGGATTCAACGACGA 57.541 40.909 6.95 0.00 36.17 4.20
13 14 5.293324 TGATTTATCCAAGGATTCAACGACG 59.707 40.000 6.95 0.00 36.17 5.12
14 15 6.677781 TGATTTATCCAAGGATTCAACGAC 57.322 37.500 6.95 0.00 36.17 4.34
15 16 7.695480 TTTGATTTATCCAAGGATTCAACGA 57.305 32.000 6.95 0.00 32.18 3.85
16 17 7.009540 GCTTTTGATTTATCCAAGGATTCAACG 59.990 37.037 6.95 6.54 32.18 4.10
17 18 7.818930 TGCTTTTGATTTATCCAAGGATTCAAC 59.181 33.333 6.95 1.68 32.18 3.18
18 19 7.818930 GTGCTTTTGATTTATCCAAGGATTCAA 59.181 33.333 6.95 8.51 36.17 2.69
19 20 7.322664 GTGCTTTTGATTTATCCAAGGATTCA 58.677 34.615 6.95 2.52 36.17 2.57
20 21 6.758416 GGTGCTTTTGATTTATCCAAGGATTC 59.242 38.462 6.95 0.00 36.17 2.52
21 22 6.352137 GGGTGCTTTTGATTTATCCAAGGATT 60.352 38.462 6.95 0.00 36.17 3.01
22 23 5.129320 GGGTGCTTTTGATTTATCCAAGGAT 59.871 40.000 6.84 6.84 38.54 3.24
23 24 4.466015 GGGTGCTTTTGATTTATCCAAGGA 59.534 41.667 0.00 0.00 0.00 3.36
24 25 4.677779 CGGGTGCTTTTGATTTATCCAAGG 60.678 45.833 0.00 0.00 0.00 3.61
25 26 4.157656 TCGGGTGCTTTTGATTTATCCAAG 59.842 41.667 0.00 0.00 0.00 3.61
26 27 4.082463 GTCGGGTGCTTTTGATTTATCCAA 60.082 41.667 0.00 0.00 0.00 3.53
27 28 3.442273 GTCGGGTGCTTTTGATTTATCCA 59.558 43.478 0.00 0.00 0.00 3.41
28 29 3.442273 TGTCGGGTGCTTTTGATTTATCC 59.558 43.478 0.00 0.00 0.00 2.59
29 30 4.412207 GTGTCGGGTGCTTTTGATTTATC 58.588 43.478 0.00 0.00 0.00 1.75
30 31 3.192633 GGTGTCGGGTGCTTTTGATTTAT 59.807 43.478 0.00 0.00 0.00 1.40
31 32 2.554893 GGTGTCGGGTGCTTTTGATTTA 59.445 45.455 0.00 0.00 0.00 1.40
32 33 1.339929 GGTGTCGGGTGCTTTTGATTT 59.660 47.619 0.00 0.00 0.00 2.17
33 34 0.958822 GGTGTCGGGTGCTTTTGATT 59.041 50.000 0.00 0.00 0.00 2.57
34 35 0.893727 GGGTGTCGGGTGCTTTTGAT 60.894 55.000 0.00 0.00 0.00 2.57
35 36 1.527380 GGGTGTCGGGTGCTTTTGA 60.527 57.895 0.00 0.00 0.00 2.69
36 37 1.388065 TTGGGTGTCGGGTGCTTTTG 61.388 55.000 0.00 0.00 0.00 2.44
37 38 0.469144 ATTGGGTGTCGGGTGCTTTT 60.469 50.000 0.00 0.00 0.00 2.27
38 39 1.152830 ATTGGGTGTCGGGTGCTTT 59.847 52.632 0.00 0.00 0.00 3.51
39 40 1.603455 CATTGGGTGTCGGGTGCTT 60.603 57.895 0.00 0.00 0.00 3.91
40 41 2.034066 CATTGGGTGTCGGGTGCT 59.966 61.111 0.00 0.00 0.00 4.40
41 42 2.282180 ACATTGGGTGTCGGGTGC 60.282 61.111 0.00 0.00 35.77 5.01
42 43 1.971167 CCACATTGGGTGTCGGGTG 60.971 63.158 0.00 0.00 46.44 4.61
43 44 2.406002 GACCACATTGGGTGTCGGGT 62.406 60.000 2.04 0.00 46.44 5.28
44 45 1.674322 GACCACATTGGGTGTCGGG 60.674 63.158 2.04 0.00 46.44 5.14
45 46 2.032634 CGACCACATTGGGTGTCGG 61.033 63.158 17.09 4.51 46.44 4.79
46 47 2.677003 GCGACCACATTGGGTGTCG 61.677 63.158 19.29 19.29 46.44 4.35
47 48 0.960364 ATGCGACCACATTGGGTGTC 60.960 55.000 2.04 0.56 46.44 3.67
48 49 1.074775 ATGCGACCACATTGGGTGT 59.925 52.632 2.04 0.00 46.44 4.16
49 50 0.959867 TCATGCGACCACATTGGGTG 60.960 55.000 2.04 0.00 43.37 4.61
50 51 0.677731 CTCATGCGACCACATTGGGT 60.678 55.000 0.00 0.00 43.37 4.51
51 52 1.378882 CCTCATGCGACCACATTGGG 61.379 60.000 0.00 0.00 43.37 4.12
52 53 0.392863 TCCTCATGCGACCACATTGG 60.393 55.000 0.00 0.00 45.02 3.16
53 54 1.012086 CTCCTCATGCGACCACATTG 58.988 55.000 0.00 0.00 0.00 2.82
54 55 0.904649 TCTCCTCATGCGACCACATT 59.095 50.000 0.00 0.00 0.00 2.71
55 56 0.904649 TTCTCCTCATGCGACCACAT 59.095 50.000 0.00 0.00 0.00 3.21
56 57 0.904649 ATTCTCCTCATGCGACCACA 59.095 50.000 0.00 0.00 0.00 4.17
57 58 1.936547 GAATTCTCCTCATGCGACCAC 59.063 52.381 0.00 0.00 0.00 4.16
58 59 1.134401 GGAATTCTCCTCATGCGACCA 60.134 52.381 5.23 0.00 38.88 4.02
59 60 1.587547 GGAATTCTCCTCATGCGACC 58.412 55.000 5.23 0.00 38.88 4.79
60 61 1.139853 AGGGAATTCTCCTCATGCGAC 59.860 52.381 0.38 0.00 42.05 5.19
61 62 1.500474 AGGGAATTCTCCTCATGCGA 58.500 50.000 0.38 0.00 42.05 5.10
62 63 3.134458 GTTAGGGAATTCTCCTCATGCG 58.866 50.000 16.10 0.00 42.05 4.73
63 64 3.137360 AGGTTAGGGAATTCTCCTCATGC 59.863 47.826 16.10 7.61 42.05 4.06
64 65 4.410228 TGAGGTTAGGGAATTCTCCTCATG 59.590 45.833 20.82 0.00 43.97 3.07
65 66 4.635473 TGAGGTTAGGGAATTCTCCTCAT 58.365 43.478 20.82 9.17 43.97 2.90
66 67 3.775316 GTGAGGTTAGGGAATTCTCCTCA 59.225 47.826 20.82 20.82 45.76 3.86
67 68 4.034410 AGTGAGGTTAGGGAATTCTCCTC 58.966 47.826 16.10 17.18 42.05 3.71
68 69 3.777522 CAGTGAGGTTAGGGAATTCTCCT 59.222 47.826 16.64 16.64 42.05 3.69
69 70 3.519913 ACAGTGAGGTTAGGGAATTCTCC 59.480 47.826 0.38 3.25 41.59 3.71
70 71 4.828072 ACAGTGAGGTTAGGGAATTCTC 57.172 45.455 5.23 0.00 0.00 2.87
71 72 6.893020 ATAACAGTGAGGTTAGGGAATTCT 57.107 37.500 5.23 0.00 36.74 2.40
72 73 7.715686 CCTTATAACAGTGAGGTTAGGGAATTC 59.284 40.741 0.00 0.00 36.74 2.17
73 74 7.404980 TCCTTATAACAGTGAGGTTAGGGAATT 59.595 37.037 0.00 0.00 36.74 2.17
74 75 6.906901 TCCTTATAACAGTGAGGTTAGGGAAT 59.093 38.462 0.00 0.00 36.74 3.01
75 76 6.266080 TCCTTATAACAGTGAGGTTAGGGAA 58.734 40.000 0.00 0.00 36.74 3.97
76 77 5.845734 TCCTTATAACAGTGAGGTTAGGGA 58.154 41.667 0.00 0.00 36.74 4.20
77 78 5.453480 GCTCCTTATAACAGTGAGGTTAGGG 60.453 48.000 0.00 0.00 36.74 3.53
78 79 5.602628 GCTCCTTATAACAGTGAGGTTAGG 58.397 45.833 0.00 0.00 36.74 2.69
79 80 5.163540 ACGCTCCTTATAACAGTGAGGTTAG 60.164 44.000 0.00 0.00 36.74 2.34
80 81 4.708421 ACGCTCCTTATAACAGTGAGGTTA 59.292 41.667 0.00 0.00 37.62 2.85
81 82 3.514309 ACGCTCCTTATAACAGTGAGGTT 59.486 43.478 0.00 0.00 34.81 3.50
82 83 3.097614 ACGCTCCTTATAACAGTGAGGT 58.902 45.455 0.00 0.00 0.00 3.85
83 84 3.381908 AGACGCTCCTTATAACAGTGAGG 59.618 47.826 0.00 0.00 0.00 3.86
84 85 4.640789 AGACGCTCCTTATAACAGTGAG 57.359 45.455 0.00 0.00 0.00 3.51
85 86 4.705507 AGAAGACGCTCCTTATAACAGTGA 59.294 41.667 0.00 0.00 0.00 3.41
86 87 5.000012 AGAAGACGCTCCTTATAACAGTG 58.000 43.478 0.00 0.00 0.00 3.66
87 88 5.662674 AAGAAGACGCTCCTTATAACAGT 57.337 39.130 0.00 0.00 0.00 3.55
88 89 5.520649 GGAAAGAAGACGCTCCTTATAACAG 59.479 44.000 0.00 0.00 0.00 3.16
89 90 5.416947 GGAAAGAAGACGCTCCTTATAACA 58.583 41.667 0.00 0.00 0.00 2.41
90 91 4.809958 GGGAAAGAAGACGCTCCTTATAAC 59.190 45.833 0.00 0.00 0.00 1.89
91 92 4.441079 CGGGAAAGAAGACGCTCCTTATAA 60.441 45.833 0.00 0.00 0.00 0.98
92 93 3.067742 CGGGAAAGAAGACGCTCCTTATA 59.932 47.826 0.00 0.00 0.00 0.98
93 94 2.159085 CGGGAAAGAAGACGCTCCTTAT 60.159 50.000 0.00 0.00 0.00 1.73
104 105 2.093764 ACATCTCTCAGCGGGAAAGAAG 60.094 50.000 0.00 0.00 0.00 2.85
107 108 1.472376 GGACATCTCTCAGCGGGAAAG 60.472 57.143 0.00 0.00 0.00 2.62
111 112 1.739049 GAGGACATCTCTCAGCGGG 59.261 63.158 0.00 0.00 39.38 6.13
112 113 1.358402 CGAGGACATCTCTCAGCGG 59.642 63.158 0.00 0.00 40.30 5.52
152 153 2.686106 ATAGCCGGGTCGTGGGTT 60.686 61.111 10.79 0.00 38.39 4.11
153 154 3.152400 GATAGCCGGGTCGTGGGT 61.152 66.667 10.79 0.00 40.94 4.51
154 155 2.727392 TTGATAGCCGGGTCGTGGG 61.727 63.158 10.79 0.00 0.00 4.61
220 221 4.180946 CTCGGCTCGTCTCCGGTG 62.181 72.222 0.00 0.00 46.43 4.94
242 243 0.523072 GGTTGTAGTACAGCGACGGA 59.477 55.000 10.57 0.00 29.43 4.69
255 259 3.288099 GGAGACGGGTAGGGTTGTA 57.712 57.895 0.00 0.00 0.00 2.41
312 316 1.446966 GCTTGGACCTGTCTCGAGC 60.447 63.158 7.81 3.58 33.43 5.03
315 319 1.079543 CTGGCTTGGACCTGTCTCG 60.080 63.158 0.00 0.00 0.00 4.04
317 321 2.900106 GCCTGGCTTGGACCTGTCT 61.900 63.158 12.43 0.00 0.00 3.41
475 493 2.304761 TGGAGTGAGTTTAGGGCGATTT 59.695 45.455 0.00 0.00 0.00 2.17
506 524 1.187087 GAGAGAGGTACTGGTGGTGG 58.813 60.000 0.00 0.00 41.55 4.61
507 525 1.546476 GTGAGAGAGGTACTGGTGGTG 59.454 57.143 0.00 0.00 41.55 4.17
508 526 1.147191 TGTGAGAGAGGTACTGGTGGT 59.853 52.381 0.00 0.00 41.55 4.16
509 527 1.546476 GTGTGAGAGAGGTACTGGTGG 59.454 57.143 0.00 0.00 41.55 4.61
510 528 1.200252 CGTGTGAGAGAGGTACTGGTG 59.800 57.143 0.00 0.00 41.55 4.17
511 529 1.535833 CGTGTGAGAGAGGTACTGGT 58.464 55.000 0.00 0.00 41.55 4.00
512 530 0.171455 GCGTGTGAGAGAGGTACTGG 59.829 60.000 0.00 0.00 41.55 4.00
513 531 0.179187 CGCGTGTGAGAGAGGTACTG 60.179 60.000 0.00 0.00 41.55 2.74
552 570 2.588989 GCTGGCTCAGGGAAGGAG 59.411 66.667 4.65 0.00 35.47 3.69
609 649 3.465403 CTGCGGGTGAGAGGGAGG 61.465 72.222 0.00 0.00 0.00 4.30
610 650 4.154347 GCTGCGGGTGAGAGGGAG 62.154 72.222 0.00 0.00 0.00 4.30
613 653 4.803426 GACGCTGCGGGTGAGAGG 62.803 72.222 26.95 0.00 0.00 3.69
695 739 4.735358 GGGAAGGTGGCGGGGAAC 62.735 72.222 0.00 0.00 0.00 3.62
743 789 0.661780 GAGGTTCGATCGAGATGCGG 60.662 60.000 18.54 0.00 41.33 5.69
766 812 3.436924 GGTGGGCGGTAAAAGGCG 61.437 66.667 0.00 0.00 34.74 5.52
835 881 3.372554 CTTTCCCTCCTCCGTCCGC 62.373 68.421 0.00 0.00 0.00 5.54
944 995 4.660938 AAACGGCCACCAGCTCCC 62.661 66.667 2.24 0.00 43.05 4.30
1061 1112 3.925362 TTGATGTCGACGCACGGGG 62.925 63.158 11.62 0.00 42.82 5.73
1071 1122 0.910513 CGACGAAGAGCTTGATGTCG 59.089 55.000 14.90 14.90 42.37 4.35
1216 1297 2.113243 GAGTTGGCGGAGTGGACCTT 62.113 60.000 0.00 0.00 0.00 3.50
1306 1387 3.869272 CTGCATCGGAACAGCGGC 61.869 66.667 0.00 0.00 0.00 6.53
1310 1391 2.758089 GCCAGCTGCATCGGAACAG 61.758 63.158 8.66 6.95 40.77 3.16
1311 1392 2.747460 GCCAGCTGCATCGGAACA 60.747 61.111 8.66 0.00 40.77 3.18
1312 1393 3.869272 CGCCAGCTGCATCGGAAC 61.869 66.667 8.66 0.00 41.33 3.62
2361 2550 2.772691 CGTGTACCCCGAGAGCCTC 61.773 68.421 0.00 0.00 0.00 4.70
2439 2628 5.639506 AGACATCACAAACCTTGAGTAATCG 59.360 40.000 0.00 0.00 0.00 3.34
2460 2653 4.379603 CGAATGGACAGATACGGGATAGAC 60.380 50.000 0.00 0.00 0.00 2.59
2522 2722 0.101219 CTAAATTTGGGAGGCAGCGC 59.899 55.000 0.00 0.00 0.00 5.92
2526 2726 3.091545 CTGAAGCTAAATTTGGGAGGCA 58.908 45.455 0.00 0.00 0.00 4.75
2555 2755 6.042208 GGAGTATTTACTACCAGCCTGAATCT 59.958 42.308 0.00 0.00 36.50 2.40
2585 2788 3.564053 ACCAAACCCGTAGAGACAAAA 57.436 42.857 0.00 0.00 0.00 2.44
2592 2795 2.156098 GAATGCAACCAAACCCGTAGA 58.844 47.619 0.00 0.00 0.00 2.59
2597 2800 0.321346 CTGGGAATGCAACCAAACCC 59.679 55.000 13.85 9.93 39.36 4.11
2606 2809 7.498900 CGGCTAAATTATATATCTGGGAATGCA 59.501 37.037 0.00 0.00 0.00 3.96
2624 2833 1.544246 GCCAAGGTTCAACGGCTAAAT 59.456 47.619 0.00 0.00 41.50 1.40
2705 2916 1.336440 TCAGTGCCCAATTGTTCAACG 59.664 47.619 4.43 0.00 0.00 4.10
2725 2936 0.394565 AAGGTCGAACTCAAGCAGCT 59.605 50.000 1.89 0.00 0.00 4.24
2767 2982 6.648879 TTTGACCAAAGGAAATCTAACCAG 57.351 37.500 0.00 0.00 0.00 4.00
2828 3043 2.958355 TGAAAGCTGGAGAACAAAAGGG 59.042 45.455 0.00 0.00 0.00 3.95
2868 3083 1.909700 TGCAGGACTCAATTTGACCC 58.090 50.000 0.00 0.41 0.00 4.46
2947 3162 3.350833 AGATGCTGGAGAACCAAATGTC 58.649 45.455 0.00 0.00 46.32 3.06
2989 3204 8.185505 TGTGAAACCAACTGATGTTTTACTAAC 58.814 33.333 10.13 0.00 39.96 2.34
3126 3425 4.021192 TCAATTCATCTTTGTTTCCAGGCC 60.021 41.667 0.00 0.00 0.00 5.19
3132 3431 5.138125 TGGGCTCAATTCATCTTTGTTTC 57.862 39.130 0.00 0.00 0.00 2.78
3150 3449 5.598416 AAGGCAAATTCTATTTACTGGGC 57.402 39.130 0.00 0.00 0.00 5.36
3162 3490 7.486647 AGTGTCATGATGAATAAGGCAAATTC 58.513 34.615 0.00 5.22 34.55 2.17
3173 3501 9.793252 GTGCTAAAATTTAGTGTCATGATGAAT 57.207 29.630 13.56 0.00 0.00 2.57
3179 3507 7.810658 AGACTGTGCTAAAATTTAGTGTCATG 58.189 34.615 13.56 0.00 0.00 3.07
3181 3509 7.801716 AAGACTGTGCTAAAATTTAGTGTCA 57.198 32.000 13.56 9.46 0.00 3.58
3182 3510 8.129211 ACAAAGACTGTGCTAAAATTTAGTGTC 58.871 33.333 13.56 14.57 36.69 3.67
3183 3511 7.996385 ACAAAGACTGTGCTAAAATTTAGTGT 58.004 30.769 13.56 8.10 36.69 3.55
3185 3513 8.451908 AGACAAAGACTGTGCTAAAATTTAGT 57.548 30.769 13.56 0.00 38.84 2.24
3186 3514 9.387123 GAAGACAAAGACTGTGCTAAAATTTAG 57.613 33.333 8.32 8.32 38.84 1.85
3199 3685 7.199541 AGATCAACAATGAAGACAAAGACTG 57.800 36.000 0.00 0.00 39.49 3.51
3233 3719 9.982651 AGATAACATCGTTGCTATGTATTAGTT 57.017 29.630 0.00 0.00 36.56 2.24
3252 3761 7.686438 ATGTGCATTGTTAGTTCAGATAACA 57.314 32.000 0.00 0.00 40.44 2.41
3255 3764 8.236586 GTGAAATGTGCATTGTTAGTTCAGATA 58.763 33.333 0.00 0.00 0.00 1.98
3259 3768 5.527951 GGTGAAATGTGCATTGTTAGTTCA 58.472 37.500 0.00 0.00 0.00 3.18
3263 3772 4.158384 GTCGGTGAAATGTGCATTGTTAG 58.842 43.478 0.00 0.00 0.00 2.34
3264 3773 3.364465 CGTCGGTGAAATGTGCATTGTTA 60.364 43.478 0.00 0.00 0.00 2.41
3266 3775 1.069296 CGTCGGTGAAATGTGCATTGT 60.069 47.619 0.00 0.00 0.00 2.71
3267 3776 1.196581 TCGTCGGTGAAATGTGCATTG 59.803 47.619 0.00 0.00 0.00 2.82
3411 3926 2.185494 GCGTCGACCTCCCGTAGAT 61.185 63.158 10.58 0.00 0.00 1.98
3488 4003 2.530151 AACTCCTGGCAGGGCTCA 60.530 61.111 32.23 13.05 35.59 4.26
3594 4109 2.808321 GTTCTCGAACCGCCGGAC 60.808 66.667 11.71 2.11 35.36 4.79
3677 4196 2.223947 CGTATATGTACCAGCACCAGCA 60.224 50.000 0.00 0.00 45.49 4.41
3678 4197 2.404215 CGTATATGTACCAGCACCAGC 58.596 52.381 0.00 0.00 42.56 4.85
3679 4198 2.035961 AGCGTATATGTACCAGCACCAG 59.964 50.000 3.17 0.00 0.00 4.00
3680 4199 2.036387 AGCGTATATGTACCAGCACCA 58.964 47.619 3.17 0.00 0.00 4.17
3681 4200 2.035449 TCAGCGTATATGTACCAGCACC 59.965 50.000 3.17 0.00 0.00 5.01
3682 4201 3.364889 TCAGCGTATATGTACCAGCAC 57.635 47.619 3.17 0.00 0.00 4.40
3705 4224 6.785076 TCCAGTCCACACATCCTAAATAAAA 58.215 36.000 0.00 0.00 0.00 1.52
3725 4246 7.978975 CCTCTTCTAATAAAACAGACTCTCCAG 59.021 40.741 0.00 0.00 0.00 3.86
3726 4247 7.579723 GCCTCTTCTAATAAAACAGACTCTCCA 60.580 40.741 0.00 0.00 0.00 3.86
3727 4248 6.759356 GCCTCTTCTAATAAAACAGACTCTCC 59.241 42.308 0.00 0.00 0.00 3.71
3728 4249 7.324178 TGCCTCTTCTAATAAAACAGACTCTC 58.676 38.462 0.00 0.00 0.00 3.20
3729 4250 7.246171 TGCCTCTTCTAATAAAACAGACTCT 57.754 36.000 0.00 0.00 0.00 3.24
3730 4251 6.536941 CCTGCCTCTTCTAATAAAACAGACTC 59.463 42.308 0.00 0.00 0.00 3.36
3731 4252 6.013293 ACCTGCCTCTTCTAATAAAACAGACT 60.013 38.462 0.00 0.00 0.00 3.24
3761 4282 4.201841 ACGAAGAACCAAAACTTTACACCG 60.202 41.667 0.00 0.00 0.00 4.94
3790 4311 1.152963 CCCCATTACTGAAGGGCCG 60.153 63.158 0.00 0.00 41.42 6.13
3800 4321 3.785486 GCAAAAAGCAGATCCCCATTAC 58.215 45.455 0.00 0.00 44.79 1.89
3846 4380 2.081462 GTAAACGAATGTGGGGGACAG 58.919 52.381 0.00 0.00 38.23 3.51
3859 4393 4.316205 ACACACACAGATCTGTAAACGA 57.684 40.909 27.44 0.00 42.83 3.85
3865 4399 4.145052 TCAGTCTACACACACAGATCTGT 58.855 43.478 22.89 22.89 46.17 3.41
3866 4400 4.773323 TCAGTCTACACACACAGATCTG 57.227 45.455 21.37 21.37 0.00 2.90
3901 4435 6.514947 AGATGAAAGAATCTAGCAGCAGTAG 58.485 40.000 0.00 0.00 35.09 2.57
3978 4521 8.017373 AGAAAGATCACAAATGATGTAACAACG 58.983 33.333 0.00 0.00 46.01 4.10
4003 4552 1.665916 CTGACAGTCACACGGCCAG 60.666 63.158 2.24 0.00 0.00 4.85
4013 4562 0.108585 TCCCTGGTTTGCTGACAGTC 59.891 55.000 3.99 0.00 0.00 3.51
4039 4905 0.672711 CTTCCCTTCCCGGTTTCGAC 60.673 60.000 0.00 0.00 39.00 4.20
4053 4919 1.079750 GACCACAGCTCGTCTTCCC 60.080 63.158 0.00 0.00 0.00 3.97
4054 4920 0.318762 AAGACCACAGCTCGTCTTCC 59.681 55.000 12.49 0.00 44.12 3.46
4055 4921 2.156343 AAAGACCACAGCTCGTCTTC 57.844 50.000 16.70 4.16 46.14 2.87
4057 4923 1.270358 GGAAAAGACCACAGCTCGTCT 60.270 52.381 2.46 2.46 41.10 4.18
4116 4982 3.751621 CAGACCTGTTGCAATCGAAATC 58.248 45.455 0.59 0.00 0.00 2.17
4174 5044 2.186903 CCGTTCGTCCCTCCCATG 59.813 66.667 0.00 0.00 0.00 3.66
4207 5077 0.792640 CCCATCACGCGCTATCATTC 59.207 55.000 5.73 0.00 0.00 2.67
4249 5120 1.083401 CAATCTATCCAACGCGCGC 60.083 57.895 32.58 23.91 0.00 6.86
4256 5127 3.565482 GCAAAGCGGATCAATCTATCCAA 59.435 43.478 3.94 0.00 44.98 3.53
4382 5267 2.437716 GAAGGCGGCGGAAATCCA 60.438 61.111 9.78 0.00 35.14 3.41
4408 5293 3.822940 AGTATCCTCTGCGTAGTAGCTT 58.177 45.455 0.00 0.00 41.03 3.74
4409 5294 3.495434 AGTATCCTCTGCGTAGTAGCT 57.505 47.619 0.00 0.00 41.03 3.32
4410 5295 3.854045 GCAAGTATCCTCTGCGTAGTAGC 60.854 52.174 0.00 0.00 41.03 3.58
4411 5296 3.566322 AGCAAGTATCCTCTGCGTAGTAG 59.434 47.826 0.00 0.00 43.21 2.57
4412 5297 3.552875 AGCAAGTATCCTCTGCGTAGTA 58.447 45.455 0.00 0.00 0.00 1.82
4413 5298 2.359531 GAGCAAGTATCCTCTGCGTAGT 59.640 50.000 0.00 0.00 0.00 2.73
4414 5299 2.359214 TGAGCAAGTATCCTCTGCGTAG 59.641 50.000 0.00 0.00 0.00 3.51
4415 5300 2.359214 CTGAGCAAGTATCCTCTGCGTA 59.641 50.000 0.00 0.00 0.00 4.42
4416 5301 1.135915 CTGAGCAAGTATCCTCTGCGT 59.864 52.381 0.00 0.00 0.00 5.24
4417 5302 1.406898 TCTGAGCAAGTATCCTCTGCG 59.593 52.381 0.00 0.00 0.00 5.18
4418 5303 2.797792 CGTCTGAGCAAGTATCCTCTGC 60.798 54.545 0.00 0.00 0.00 4.26
4419 5304 2.685388 TCGTCTGAGCAAGTATCCTCTG 59.315 50.000 0.00 0.00 0.00 3.35
4420 5305 3.006112 TCGTCTGAGCAAGTATCCTCT 57.994 47.619 0.00 0.00 0.00 3.69
4421 5306 3.784701 TTCGTCTGAGCAAGTATCCTC 57.215 47.619 0.00 0.00 0.00 3.71
4422 5307 4.021016 AGTTTTCGTCTGAGCAAGTATCCT 60.021 41.667 0.00 0.00 0.00 3.24
4423 5308 4.092091 CAGTTTTCGTCTGAGCAAGTATCC 59.908 45.833 0.00 0.00 35.20 2.59
4424 5309 4.092091 CCAGTTTTCGTCTGAGCAAGTATC 59.908 45.833 0.00 0.00 35.20 2.24
4425 5310 3.997021 CCAGTTTTCGTCTGAGCAAGTAT 59.003 43.478 0.00 0.00 35.20 2.12
4426 5311 3.069016 TCCAGTTTTCGTCTGAGCAAGTA 59.931 43.478 0.00 0.00 35.20 2.24
4427 5312 2.158957 TCCAGTTTTCGTCTGAGCAAGT 60.159 45.455 0.00 0.00 35.20 3.16
4428 5313 2.221981 GTCCAGTTTTCGTCTGAGCAAG 59.778 50.000 0.00 0.00 35.20 4.01
4429 5314 2.210116 GTCCAGTTTTCGTCTGAGCAA 58.790 47.619 0.00 0.00 35.20 3.91
4430 5315 1.865865 GTCCAGTTTTCGTCTGAGCA 58.134 50.000 0.00 0.00 35.20 4.26
4431 5316 0.784778 CGTCCAGTTTTCGTCTGAGC 59.215 55.000 0.00 0.00 35.20 4.26
4432 5317 2.417339 TCGTCCAGTTTTCGTCTGAG 57.583 50.000 0.00 0.00 35.20 3.35
4433 5318 2.609491 CCATCGTCCAGTTTTCGTCTGA 60.609 50.000 0.00 0.00 35.20 3.27
4434 5319 1.726791 CCATCGTCCAGTTTTCGTCTG 59.273 52.381 0.00 0.00 0.00 3.51
4435 5320 1.343465 ACCATCGTCCAGTTTTCGTCT 59.657 47.619 0.00 0.00 0.00 4.18
4436 5321 1.459592 CACCATCGTCCAGTTTTCGTC 59.540 52.381 0.00 0.00 0.00 4.20
4437 5322 1.069513 TCACCATCGTCCAGTTTTCGT 59.930 47.619 0.00 0.00 0.00 3.85
4438 5323 1.790755 TCACCATCGTCCAGTTTTCG 58.209 50.000 0.00 0.00 0.00 3.46
4439 5324 3.127030 GGATTCACCATCGTCCAGTTTTC 59.873 47.826 0.00 0.00 38.79 2.29
4440 5325 3.081804 GGATTCACCATCGTCCAGTTTT 58.918 45.455 0.00 0.00 38.79 2.43
4441 5326 2.039746 TGGATTCACCATCGTCCAGTTT 59.960 45.455 0.00 0.00 44.64 2.66
4442 5327 1.628340 TGGATTCACCATCGTCCAGTT 59.372 47.619 0.00 0.00 44.64 3.16
4443 5328 1.275666 TGGATTCACCATCGTCCAGT 58.724 50.000 0.00 0.00 44.64 4.00
4453 5338 3.541632 ACGACATACCAATGGATTCACC 58.458 45.455 6.16 0.00 37.43 4.02
4454 5339 5.357257 ACTACGACATACCAATGGATTCAC 58.643 41.667 6.16 0.00 37.43 3.18
4455 5340 5.607939 ACTACGACATACCAATGGATTCA 57.392 39.130 6.16 0.00 37.43 2.57
4456 5341 6.715464 CAAACTACGACATACCAATGGATTC 58.285 40.000 6.16 0.00 37.43 2.52
4457 5342 5.065988 GCAAACTACGACATACCAATGGATT 59.934 40.000 6.16 0.00 37.43 3.01
4458 5343 4.574828 GCAAACTACGACATACCAATGGAT 59.425 41.667 6.16 0.00 37.43 3.41
4459 5344 3.936453 GCAAACTACGACATACCAATGGA 59.064 43.478 6.16 0.00 37.43 3.41
4460 5345 3.938963 AGCAAACTACGACATACCAATGG 59.061 43.478 0.00 0.00 37.43 3.16
4461 5346 4.629634 TGAGCAAACTACGACATACCAATG 59.370 41.667 0.00 0.00 39.17 2.82
4462 5347 4.827692 TGAGCAAACTACGACATACCAAT 58.172 39.130 0.00 0.00 0.00 3.16
4463 5348 4.260139 TGAGCAAACTACGACATACCAA 57.740 40.909 0.00 0.00 0.00 3.67
4464 5349 3.945981 TGAGCAAACTACGACATACCA 57.054 42.857 0.00 0.00 0.00 3.25
4465 5350 4.982916 CCTATGAGCAAACTACGACATACC 59.017 45.833 0.00 0.00 0.00 2.73
4466 5351 5.589192 ACCTATGAGCAAACTACGACATAC 58.411 41.667 0.00 0.00 0.00 2.39
4467 5352 5.847111 ACCTATGAGCAAACTACGACATA 57.153 39.130 0.00 0.00 0.00 2.29
4468 5353 4.737855 ACCTATGAGCAAACTACGACAT 57.262 40.909 0.00 0.00 0.00 3.06
4469 5354 5.451381 CCATACCTATGAGCAAACTACGACA 60.451 44.000 0.00 0.00 35.75 4.35
4470 5355 4.982916 CCATACCTATGAGCAAACTACGAC 59.017 45.833 0.00 0.00 35.75 4.34
4471 5356 4.891168 TCCATACCTATGAGCAAACTACGA 59.109 41.667 0.00 0.00 35.75 3.43
4472 5357 4.982916 GTCCATACCTATGAGCAAACTACG 59.017 45.833 0.00 0.00 35.75 3.51
4473 5358 4.982916 CGTCCATACCTATGAGCAAACTAC 59.017 45.833 0.00 0.00 35.75 2.73
4474 5359 4.038763 CCGTCCATACCTATGAGCAAACTA 59.961 45.833 0.00 0.00 35.75 2.24
4475 5360 3.181465 CCGTCCATACCTATGAGCAAACT 60.181 47.826 0.00 0.00 35.75 2.66
4476 5361 3.131396 CCGTCCATACCTATGAGCAAAC 58.869 50.000 0.00 0.00 35.75 2.93
4477 5362 2.484770 GCCGTCCATACCTATGAGCAAA 60.485 50.000 0.00 0.00 35.75 3.68
4478 5363 1.070134 GCCGTCCATACCTATGAGCAA 59.930 52.381 0.00 0.00 35.75 3.91
4479 5364 0.679505 GCCGTCCATACCTATGAGCA 59.320 55.000 0.00 0.00 35.75 4.26
4480 5365 0.969894 AGCCGTCCATACCTATGAGC 59.030 55.000 0.00 0.00 35.75 4.26
4481 5366 2.628178 TCAAGCCGTCCATACCTATGAG 59.372 50.000 0.00 0.00 35.75 2.90
4482 5367 2.673258 TCAAGCCGTCCATACCTATGA 58.327 47.619 0.00 0.00 35.75 2.15
4483 5368 3.685139 ATCAAGCCGTCCATACCTATG 57.315 47.619 0.00 0.00 0.00 2.23
4484 5369 4.322801 GCTAATCAAGCCGTCCATACCTAT 60.323 45.833 0.00 0.00 46.25 2.57
4485 5370 3.006537 GCTAATCAAGCCGTCCATACCTA 59.993 47.826 0.00 0.00 46.25 3.08
4486 5371 2.224305 GCTAATCAAGCCGTCCATACCT 60.224 50.000 0.00 0.00 46.25 3.08
4487 5372 2.143925 GCTAATCAAGCCGTCCATACC 58.856 52.381 0.00 0.00 46.25 2.73
4508 5393 1.139989 CACGATTCTTGCACGACAGT 58.860 50.000 0.24 0.00 0.00 3.55
4509 5394 0.179240 GCACGATTCTTGCACGACAG 60.179 55.000 10.02 0.00 39.93 3.51
4510 5395 0.878086 TGCACGATTCTTGCACGACA 60.878 50.000 13.26 0.00 45.06 4.35
4511 5396 1.859398 TGCACGATTCTTGCACGAC 59.141 52.632 13.26 0.00 45.06 4.34
4512 5397 4.352386 TGCACGATTCTTGCACGA 57.648 50.000 13.26 0.00 45.06 4.35
4516 5401 0.955428 TCAGGGTGCACGATTCTTGC 60.955 55.000 11.45 8.12 40.63 4.01
4517 5402 1.081892 CTCAGGGTGCACGATTCTTG 58.918 55.000 11.45 3.66 0.00 3.02
4518 5403 0.687354 ACTCAGGGTGCACGATTCTT 59.313 50.000 11.45 0.00 0.00 2.52
4519 5404 0.247736 GACTCAGGGTGCACGATTCT 59.752 55.000 11.45 2.81 0.00 2.40
4520 5405 1.078759 CGACTCAGGGTGCACGATTC 61.079 60.000 11.45 5.71 0.00 2.52
4521 5406 1.079819 CGACTCAGGGTGCACGATT 60.080 57.895 11.45 0.00 0.00 3.34
4522 5407 2.214181 GACGACTCAGGGTGCACGAT 62.214 60.000 11.45 0.00 0.00 3.73
4523 5408 2.910479 ACGACTCAGGGTGCACGA 60.910 61.111 11.45 1.42 0.00 4.35
4524 5409 2.430921 GACGACTCAGGGTGCACG 60.431 66.667 11.45 0.00 0.00 5.34
4525 5410 1.373497 CAGACGACTCAGGGTGCAC 60.373 63.158 8.80 8.80 0.00 4.57
4526 5411 3.051210 CAGACGACTCAGGGTGCA 58.949 61.111 0.00 0.00 0.00 4.57
4527 5412 2.433318 GCAGACGACTCAGGGTGC 60.433 66.667 0.00 0.00 0.00 5.01
4528 5413 0.817654 TATGCAGACGACTCAGGGTG 59.182 55.000 0.00 0.00 0.00 4.61
4529 5414 1.107114 CTATGCAGACGACTCAGGGT 58.893 55.000 0.00 0.00 0.00 4.34
4530 5415 0.249238 GCTATGCAGACGACTCAGGG 60.249 60.000 0.00 0.00 0.00 4.45
4531 5416 0.457443 TGCTATGCAGACGACTCAGG 59.543 55.000 0.00 0.00 33.32 3.86
4542 5427 1.522355 GGAAGAGCGCTGCTATGCA 60.522 57.895 18.48 0.00 39.88 3.96
4543 5428 1.091771 TTGGAAGAGCGCTGCTATGC 61.092 55.000 18.48 3.50 39.88 3.14
4544 5429 0.935898 CTTGGAAGAGCGCTGCTATG 59.064 55.000 18.48 0.27 39.88 2.23
4545 5430 0.826715 TCTTGGAAGAGCGCTGCTAT 59.173 50.000 18.48 0.00 39.88 2.97
4546 5431 0.826715 ATCTTGGAAGAGCGCTGCTA 59.173 50.000 18.48 0.00 39.88 3.49
4547 5432 0.461693 GATCTTGGAAGAGCGCTGCT 60.462 55.000 18.48 9.38 43.88 4.24
4548 5433 2.013021 GATCTTGGAAGAGCGCTGC 58.987 57.895 18.48 6.71 38.66 5.25
4553 5438 0.107945 AGCACCGATCTTGGAAGAGC 60.108 55.000 0.00 0.00 38.66 4.09
4554 5439 1.480137 AGAGCACCGATCTTGGAAGAG 59.520 52.381 0.00 0.00 38.66 2.85
4555 5440 1.205655 CAGAGCACCGATCTTGGAAGA 59.794 52.381 0.00 0.00 39.78 2.87
4556 5441 1.066573 ACAGAGCACCGATCTTGGAAG 60.067 52.381 0.00 0.00 0.00 3.46
4557 5442 0.976641 ACAGAGCACCGATCTTGGAA 59.023 50.000 0.00 0.00 0.00 3.53
4558 5443 0.247460 CACAGAGCACCGATCTTGGA 59.753 55.000 0.00 0.00 0.00 3.53
4559 5444 1.364626 GCACAGAGCACCGATCTTGG 61.365 60.000 0.00 0.00 44.79 3.61
4560 5445 2.084844 GCACAGAGCACCGATCTTG 58.915 57.895 0.00 0.00 44.79 3.02
4561 5446 4.606071 GCACAGAGCACCGATCTT 57.394 55.556 0.00 0.00 44.79 2.40
4570 5455 3.044059 GCGGTGGAATGCACAGAGC 62.044 63.158 9.33 6.37 45.96 4.09
4571 5456 1.672030 TGCGGTGGAATGCACAGAG 60.672 57.895 9.33 0.00 35.90 3.35
4572 5457 2.429494 TGCGGTGGAATGCACAGA 59.571 55.556 9.33 0.00 35.90 3.41
4586 5471 2.762616 GAAATTTTGCCGCGTGCG 59.237 55.556 4.92 7.38 45.60 5.34
4587 5472 2.014018 ACGAAATTTTGCCGCGTGC 61.014 52.632 4.92 9.16 41.77 5.34
4588 5473 1.766176 CACGAAATTTTGCCGCGTG 59.234 52.632 12.93 12.93 44.78 5.34
4589 5474 0.248702 AACACGAAATTTTGCCGCGT 60.249 45.000 4.92 0.73 35.33 6.01
4590 5475 0.849579 AAACACGAAATTTTGCCGCG 59.150 45.000 0.00 0.00 0.00 6.46
4591 5476 2.282820 TCAAAACACGAAATTTTGCCGC 59.717 40.909 5.27 0.00 43.62 6.53
4592 5477 3.302156 GGTCAAAACACGAAATTTTGCCG 60.302 43.478 5.27 0.83 43.62 5.69
4593 5478 3.868661 AGGTCAAAACACGAAATTTTGCC 59.131 39.130 5.27 16.32 43.62 4.52
4594 5479 5.463499 AAGGTCAAAACACGAAATTTTGC 57.537 34.783 5.27 11.02 43.62 3.68
4595 5480 7.213521 CGAAAAAGGTCAAAACACGAAATTTTG 59.786 33.333 3.73 3.73 44.74 2.44
4596 5481 7.116519 TCGAAAAAGGTCAAAACACGAAATTTT 59.883 29.630 0.00 0.00 0.00 1.82
4597 5482 6.586844 TCGAAAAAGGTCAAAACACGAAATTT 59.413 30.769 0.00 0.00 0.00 1.82
4598 5483 6.094061 TCGAAAAAGGTCAAAACACGAAATT 58.906 32.000 0.00 0.00 0.00 1.82
4599 5484 5.642686 TCGAAAAAGGTCAAAACACGAAAT 58.357 33.333 0.00 0.00 0.00 2.17
4600 5485 5.044428 TCGAAAAAGGTCAAAACACGAAA 57.956 34.783 0.00 0.00 0.00 3.46
4601 5486 4.681835 TCGAAAAAGGTCAAAACACGAA 57.318 36.364 0.00 0.00 0.00 3.85
4602 5487 4.886247 ATCGAAAAAGGTCAAAACACGA 57.114 36.364 0.00 0.00 0.00 4.35
4603 5488 4.907582 GGTATCGAAAAAGGTCAAAACACG 59.092 41.667 0.00 0.00 0.00 4.49
4604 5489 6.068473 AGGTATCGAAAAAGGTCAAAACAC 57.932 37.500 0.00 0.00 0.00 3.32
4605 5490 7.989416 ATAGGTATCGAAAAAGGTCAAAACA 57.011 32.000 0.00 0.00 0.00 2.83
4606 5491 7.691050 CGAATAGGTATCGAAAAAGGTCAAAAC 59.309 37.037 0.00 0.00 42.76 2.43
4607 5492 7.603404 TCGAATAGGTATCGAAAAAGGTCAAAA 59.397 33.333 0.00 0.00 45.46 2.44
4608 5493 7.098477 TCGAATAGGTATCGAAAAAGGTCAAA 58.902 34.615 0.00 0.00 45.46 2.69
4609 5494 6.632909 TCGAATAGGTATCGAAAAAGGTCAA 58.367 36.000 0.00 0.00 45.46 3.18
4610 5495 6.211587 TCGAATAGGTATCGAAAAAGGTCA 57.788 37.500 0.00 0.00 45.46 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.