Multiple sequence alignment - TraesCS6A01G275200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G275200 | chr6A | 100.000 | 4848 | 0 | 0 | 1 | 4848 | 501806318 | 501801471 | 0.000000e+00 | 8953.0 |
1 | TraesCS6A01G275200 | chr6A | 99.107 | 112 | 1 | 0 | 4250 | 4361 | 501802013 | 501801902 | 8.230000e-48 | 202.0 |
2 | TraesCS6A01G275200 | chr6A | 99.107 | 112 | 1 | 0 | 4306 | 4417 | 501802069 | 501801958 | 8.230000e-48 | 202.0 |
3 | TraesCS6A01G275200 | chr6A | 86.982 | 169 | 22 | 0 | 548 | 716 | 485383011 | 485383179 | 1.780000e-44 | 191.0 |
4 | TraesCS6A01G275200 | chr6A | 98.214 | 56 | 1 | 0 | 4250 | 4305 | 501801957 | 501801902 | 1.110000e-16 | 99.0 |
5 | TraesCS6A01G275200 | chr6A | 98.214 | 56 | 1 | 0 | 4362 | 4417 | 501802069 | 501802014 | 1.110000e-16 | 99.0 |
6 | TraesCS6A01G275200 | chr6D | 96.511 | 1605 | 47 | 8 | 1603 | 3202 | 360690887 | 360689287 | 0.000000e+00 | 2645.0 |
7 | TraesCS6A01G275200 | chr6D | 90.852 | 951 | 54 | 13 | 769 | 1708 | 360691808 | 360690880 | 0.000000e+00 | 1243.0 |
8 | TraesCS6A01G275200 | chr6D | 97.670 | 515 | 8 | 3 | 3353 | 3864 | 360689012 | 360688499 | 0.000000e+00 | 881.0 |
9 | TraesCS6A01G275200 | chr6D | 93.763 | 497 | 16 | 5 | 4362 | 4848 | 360688145 | 360687654 | 0.000000e+00 | 732.0 |
10 | TraesCS6A01G275200 | chr6D | 93.351 | 376 | 21 | 2 | 3933 | 4304 | 360688466 | 360688091 | 1.970000e-153 | 553.0 |
11 | TraesCS6A01G275200 | chr6D | 85.319 | 361 | 28 | 12 | 1 | 360 | 360693332 | 360692996 | 2.780000e-92 | 350.0 |
12 | TraesCS6A01G275200 | chr6D | 97.927 | 193 | 3 | 1 | 3201 | 3392 | 360689248 | 360689056 | 2.800000e-87 | 333.0 |
13 | TraesCS6A01G275200 | chr6B | 92.344 | 1685 | 85 | 17 | 548 | 2223 | 542236207 | 542234558 | 0.000000e+00 | 2357.0 |
14 | TraesCS6A01G275200 | chr6B | 95.158 | 1136 | 39 | 14 | 2267 | 3392 | 542234554 | 542233425 | 0.000000e+00 | 1779.0 |
15 | TraesCS6A01G275200 | chr6B | 92.708 | 960 | 59 | 10 | 3353 | 4308 | 542233381 | 542232429 | 0.000000e+00 | 1375.0 |
16 | TraesCS6A01G275200 | chr6B | 90.656 | 503 | 26 | 7 | 4362 | 4848 | 542232487 | 542231990 | 0.000000e+00 | 649.0 |
17 | TraesCS6A01G275200 | chr6B | 85.434 | 357 | 35 | 6 | 6 | 362 | 542236554 | 542236215 | 5.970000e-94 | 355.0 |
18 | TraesCS6A01G275200 | chr7B | 89.024 | 164 | 17 | 1 | 548 | 710 | 403488132 | 403487969 | 8.230000e-48 | 202.0 |
19 | TraesCS6A01G275200 | chr3D | 88.957 | 163 | 18 | 0 | 548 | 710 | 468774472 | 468774310 | 8.230000e-48 | 202.0 |
20 | TraesCS6A01G275200 | chr3A | 88.889 | 162 | 18 | 0 | 548 | 709 | 308789579 | 308789740 | 2.960000e-47 | 200.0 |
21 | TraesCS6A01G275200 | chr7D | 88.272 | 162 | 19 | 0 | 548 | 709 | 440202706 | 440202545 | 1.380000e-45 | 195.0 |
22 | TraesCS6A01G275200 | chr1B | 87.059 | 170 | 21 | 1 | 378 | 547 | 652304848 | 652304680 | 1.780000e-44 | 191.0 |
23 | TraesCS6A01G275200 | chr7A | 87.273 | 165 | 21 | 0 | 548 | 712 | 235411211 | 235411375 | 6.410000e-44 | 189.0 |
24 | TraesCS6A01G275200 | chr1A | 86.628 | 172 | 21 | 2 | 375 | 546 | 563612195 | 563612026 | 6.410000e-44 | 189.0 |
25 | TraesCS6A01G275200 | chr3B | 87.195 | 164 | 21 | 0 | 548 | 711 | 389041972 | 389042135 | 2.300000e-43 | 187.0 |
26 | TraesCS6A01G275200 | chr5D | 86.047 | 172 | 24 | 0 | 548 | 719 | 63590028 | 63589857 | 8.290000e-43 | 185.0 |
27 | TraesCS6A01G275200 | chr5B | 87.117 | 163 | 21 | 0 | 548 | 710 | 328549259 | 328549421 | 8.290000e-43 | 185.0 |
28 | TraesCS6A01G275200 | chr1D | 86.765 | 136 | 18 | 0 | 374 | 509 | 470046917 | 470046782 | 8.400000e-33 | 152.0 |
29 | TraesCS6A01G275200 | chr2D | 89.773 | 88 | 7 | 2 | 3017 | 3102 | 613102095 | 613102008 | 1.430000e-20 | 111.0 |
30 | TraesCS6A01G275200 | chr2B | 93.056 | 72 | 3 | 1 | 3017 | 3086 | 748427592 | 748427521 | 2.390000e-18 | 104.0 |
31 | TraesCS6A01G275200 | chr2A | 88.506 | 87 | 8 | 1 | 3017 | 3101 | 744789584 | 744789498 | 2.390000e-18 | 104.0 |
32 | TraesCS6A01G275200 | chr2A | 95.556 | 45 | 1 | 1 | 3106 | 3149 | 744789409 | 744789365 | 2.420000e-08 | 71.3 |
33 | TraesCS6A01G275200 | chrUn | 91.429 | 70 | 6 | 0 | 369 | 438 | 35648752 | 35648821 | 3.990000e-16 | 97.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G275200 | chr6A | 501801471 | 501806318 | 4847 | True | 8953.000000 | 8953 | 100.000000 | 1 | 4848 | 1 | chr6A.!!$R1 | 4847 |
1 | TraesCS6A01G275200 | chr6D | 360687654 | 360693332 | 5678 | True | 962.428571 | 2645 | 93.627571 | 1 | 4848 | 7 | chr6D.!!$R1 | 4847 |
2 | TraesCS6A01G275200 | chr6B | 542231990 | 542236554 | 4564 | True | 1303.000000 | 2357 | 91.260000 | 6 | 4848 | 5 | chr6B.!!$R1 | 4842 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
720 | 722 | 0.036388 | CAGCCCCTAAGTCTCGCAAA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 | F |
1299 | 2294 | 0.728542 | GGTCGTTGGTTTTGACGTGT | 59.271 | 50.000 | 0.00 | 0.00 | 40.03 | 4.49 | F |
1571 | 2566 | 0.524862 | CTGCCTGCGCAAAGAAATCT | 59.475 | 50.000 | 13.05 | 0.00 | 46.66 | 2.40 | F |
1603 | 2598 | 5.610557 | TCTTGTTGGGATCCCATATGTGATA | 59.389 | 40.000 | 34.21 | 14.07 | 46.64 | 2.15 | F |
3345 | 4490 | 2.805671 | CGTTTGTACTTGCCATCACTCA | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1533 | 2528 | 2.297033 | CAGGCAGGCAAACATAAACAGT | 59.703 | 45.455 | 0.0 | 0.0 | 0.00 | 3.55 | R |
2928 | 4026 | 2.441750 | AGTAAACCAGGAAGGCACAAGA | 59.558 | 45.455 | 0.0 | 0.0 | 43.14 | 3.02 | R |
3102 | 4204 | 3.609853 | TGTTAGTTCACTGGATCATGCC | 58.390 | 45.455 | 0.0 | 0.0 | 0.00 | 4.40 | R |
3475 | 4789 | 6.256757 | GTCAGGATCTATAACAGAAGTTGCAC | 59.743 | 42.308 | 0.0 | 0.0 | 38.69 | 4.57 | R |
4733 | 6063 | 0.110486 | ATGCCACCCCGCTTATTAGG | 59.890 | 55.000 | 0.0 | 0.0 | 0.00 | 2.69 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
111 | 113 | 7.634526 | AAAGGTAAAACCCCAAATAAATCCA | 57.365 | 32.000 | 0.00 | 0.00 | 39.75 | 3.41 |
163 | 165 | 9.855021 | AAAACGGGAAGAAAGAACAATAATATG | 57.145 | 29.630 | 0.00 | 0.00 | 0.00 | 1.78 |
164 | 166 | 8.801882 | AACGGGAAGAAAGAACAATAATATGA | 57.198 | 30.769 | 0.00 | 0.00 | 0.00 | 2.15 |
165 | 167 | 8.801882 | ACGGGAAGAAAGAACAATAATATGAA | 57.198 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
166 | 168 | 9.408648 | ACGGGAAGAAAGAACAATAATATGAAT | 57.591 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
167 | 169 | 9.669353 | CGGGAAGAAAGAACAATAATATGAATG | 57.331 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
279 | 281 | 1.594833 | CCTAGTAGCACCACGCCAA | 59.405 | 57.895 | 0.00 | 0.00 | 44.04 | 4.52 |
284 | 286 | 0.882927 | GTAGCACCACGCCAAAGACA | 60.883 | 55.000 | 0.00 | 0.00 | 44.04 | 3.41 |
324 | 326 | 0.325484 | TTGGATCATTGCCCCCAAGG | 60.325 | 55.000 | 0.00 | 0.00 | 34.10 | 3.61 |
362 | 364 | 1.443802 | GTTGTTGACCAGCTCTAGGC | 58.556 | 55.000 | 0.00 | 0.00 | 42.19 | 3.93 |
363 | 365 | 0.324943 | TTGTTGACCAGCTCTAGGCC | 59.675 | 55.000 | 0.00 | 0.00 | 43.05 | 5.19 |
364 | 366 | 0.545309 | TGTTGACCAGCTCTAGGCCT | 60.545 | 55.000 | 11.78 | 11.78 | 43.05 | 5.19 |
365 | 367 | 0.615850 | GTTGACCAGCTCTAGGCCTT | 59.384 | 55.000 | 12.58 | 0.00 | 43.05 | 4.35 |
366 | 368 | 1.831736 | GTTGACCAGCTCTAGGCCTTA | 59.168 | 52.381 | 12.58 | 0.00 | 43.05 | 2.69 |
367 | 369 | 2.436173 | GTTGACCAGCTCTAGGCCTTAT | 59.564 | 50.000 | 12.58 | 0.00 | 43.05 | 1.73 |
370 | 372 | 4.295201 | TGACCAGCTCTAGGCCTTATTTA | 58.705 | 43.478 | 12.58 | 0.00 | 43.05 | 1.40 |
371 | 373 | 4.907875 | TGACCAGCTCTAGGCCTTATTTAT | 59.092 | 41.667 | 12.58 | 0.00 | 43.05 | 1.40 |
372 | 374 | 5.221722 | TGACCAGCTCTAGGCCTTATTTATG | 60.222 | 44.000 | 12.58 | 3.39 | 43.05 | 1.90 |
373 | 375 | 4.006319 | CCAGCTCTAGGCCTTATTTATGC | 58.994 | 47.826 | 12.58 | 6.52 | 43.05 | 3.14 |
374 | 376 | 4.263243 | CCAGCTCTAGGCCTTATTTATGCT | 60.263 | 45.833 | 12.58 | 8.88 | 43.05 | 3.79 |
375 | 377 | 5.046304 | CCAGCTCTAGGCCTTATTTATGCTA | 60.046 | 44.000 | 12.58 | 0.00 | 43.05 | 3.49 |
376 | 378 | 6.352565 | CCAGCTCTAGGCCTTATTTATGCTAT | 60.353 | 42.308 | 12.58 | 0.00 | 43.05 | 2.97 |
377 | 379 | 6.538021 | CAGCTCTAGGCCTTATTTATGCTATG | 59.462 | 42.308 | 12.58 | 0.00 | 43.05 | 2.23 |
378 | 380 | 6.214412 | AGCTCTAGGCCTTATTTATGCTATGT | 59.786 | 38.462 | 12.58 | 0.00 | 43.05 | 2.29 |
379 | 381 | 7.400339 | AGCTCTAGGCCTTATTTATGCTATGTA | 59.600 | 37.037 | 12.58 | 0.00 | 43.05 | 2.29 |
380 | 382 | 8.041323 | GCTCTAGGCCTTATTTATGCTATGTAA | 58.959 | 37.037 | 12.58 | 0.00 | 34.27 | 2.41 |
385 | 387 | 8.730680 | AGGCCTTATTTATGCTATGTAATTTCG | 58.269 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
386 | 388 | 8.512138 | GGCCTTATTTATGCTATGTAATTTCGT | 58.488 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
387 | 389 | 9.543018 | GCCTTATTTATGCTATGTAATTTCGTC | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
392 | 394 | 8.669946 | TTTATGCTATGTAATTTCGTCCATGA | 57.330 | 30.769 | 0.00 | 0.00 | 0.00 | 3.07 |
393 | 395 | 8.669946 | TTATGCTATGTAATTTCGTCCATGAA | 57.330 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
394 | 396 | 6.993786 | TGCTATGTAATTTCGTCCATGAAA | 57.006 | 33.333 | 0.00 | 0.00 | 41.69 | 2.69 |
395 | 397 | 7.384439 | TGCTATGTAATTTCGTCCATGAAAA | 57.616 | 32.000 | 0.00 | 0.00 | 40.90 | 2.29 |
396 | 398 | 7.821652 | TGCTATGTAATTTCGTCCATGAAAAA | 58.178 | 30.769 | 0.00 | 0.00 | 40.90 | 1.94 |
417 | 419 | 7.838771 | AAAAAGATGCTGAAATTATGAAGCC | 57.161 | 32.000 | 0.00 | 0.00 | 34.70 | 4.35 |
418 | 420 | 5.526506 | AAGATGCTGAAATTATGAAGCCC | 57.473 | 39.130 | 0.00 | 0.00 | 34.70 | 5.19 |
419 | 421 | 4.539726 | AGATGCTGAAATTATGAAGCCCA | 58.460 | 39.130 | 0.00 | 0.00 | 34.70 | 5.36 |
420 | 422 | 5.145564 | AGATGCTGAAATTATGAAGCCCAT | 58.854 | 37.500 | 0.00 | 0.00 | 39.25 | 4.00 |
421 | 423 | 6.309357 | AGATGCTGAAATTATGAAGCCCATA | 58.691 | 36.000 | 0.00 | 0.00 | 36.71 | 2.74 |
432 | 434 | 5.690464 | ATGAAGCCCATAATCTAGCTAGG | 57.310 | 43.478 | 20.58 | 4.76 | 34.49 | 3.02 |
433 | 435 | 4.493618 | TGAAGCCCATAATCTAGCTAGGT | 58.506 | 43.478 | 20.58 | 11.30 | 34.49 | 3.08 |
434 | 436 | 4.907875 | TGAAGCCCATAATCTAGCTAGGTT | 59.092 | 41.667 | 22.44 | 22.44 | 34.49 | 3.50 |
435 | 437 | 5.369699 | TGAAGCCCATAATCTAGCTAGGTTT | 59.630 | 40.000 | 23.86 | 17.30 | 34.49 | 3.27 |
436 | 438 | 5.234466 | AGCCCATAATCTAGCTAGGTTTG | 57.766 | 43.478 | 23.86 | 19.09 | 32.73 | 2.93 |
437 | 439 | 3.753797 | GCCCATAATCTAGCTAGGTTTGC | 59.246 | 47.826 | 23.86 | 16.73 | 0.00 | 3.68 |
438 | 440 | 4.505742 | GCCCATAATCTAGCTAGGTTTGCT | 60.506 | 45.833 | 23.86 | 7.36 | 43.79 | 3.91 |
439 | 441 | 5.280011 | GCCCATAATCTAGCTAGGTTTGCTA | 60.280 | 44.000 | 23.86 | 6.98 | 41.46 | 3.49 |
440 | 442 | 6.166982 | CCCATAATCTAGCTAGGTTTGCTAC | 58.833 | 44.000 | 23.86 | 0.00 | 41.46 | 3.58 |
441 | 443 | 6.014156 | CCCATAATCTAGCTAGGTTTGCTACT | 60.014 | 42.308 | 23.86 | 0.86 | 41.46 | 2.57 |
442 | 444 | 7.178628 | CCCATAATCTAGCTAGGTTTGCTACTA | 59.821 | 40.741 | 23.86 | 5.12 | 41.46 | 1.82 |
443 | 445 | 8.030106 | CCATAATCTAGCTAGGTTTGCTACTAC | 58.970 | 40.741 | 23.86 | 0.00 | 41.46 | 2.73 |
444 | 446 | 8.798402 | CATAATCTAGCTAGGTTTGCTACTACT | 58.202 | 37.037 | 23.86 | 0.00 | 41.46 | 2.57 |
445 | 447 | 6.887626 | ATCTAGCTAGGTTTGCTACTACTC | 57.112 | 41.667 | 20.58 | 0.00 | 41.46 | 2.59 |
446 | 448 | 6.003859 | TCTAGCTAGGTTTGCTACTACTCT | 57.996 | 41.667 | 20.58 | 0.00 | 41.46 | 3.24 |
447 | 449 | 7.134362 | TCTAGCTAGGTTTGCTACTACTCTA | 57.866 | 40.000 | 20.58 | 0.00 | 41.46 | 2.43 |
448 | 450 | 7.571919 | TCTAGCTAGGTTTGCTACTACTCTAA | 58.428 | 38.462 | 20.58 | 0.00 | 41.46 | 2.10 |
449 | 451 | 8.051535 | TCTAGCTAGGTTTGCTACTACTCTAAA | 58.948 | 37.037 | 20.58 | 0.00 | 41.46 | 1.85 |
450 | 452 | 7.663043 | AGCTAGGTTTGCTACTACTCTAAAT | 57.337 | 36.000 | 0.00 | 0.00 | 39.21 | 1.40 |
451 | 453 | 7.718525 | AGCTAGGTTTGCTACTACTCTAAATC | 58.281 | 38.462 | 0.00 | 0.00 | 39.21 | 2.17 |
452 | 454 | 7.342284 | AGCTAGGTTTGCTACTACTCTAAATCA | 59.658 | 37.037 | 0.00 | 0.00 | 39.21 | 2.57 |
453 | 455 | 7.650104 | GCTAGGTTTGCTACTACTCTAAATCAG | 59.350 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
454 | 456 | 6.879400 | AGGTTTGCTACTACTCTAAATCAGG | 58.121 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
455 | 457 | 6.049790 | GGTTTGCTACTACTCTAAATCAGGG | 58.950 | 44.000 | 0.00 | 0.00 | 0.00 | 4.45 |
456 | 458 | 5.871396 | TTGCTACTACTCTAAATCAGGGG | 57.129 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
457 | 459 | 5.138758 | TGCTACTACTCTAAATCAGGGGA | 57.861 | 43.478 | 0.00 | 0.00 | 0.00 | 4.81 |
458 | 460 | 5.141182 | TGCTACTACTCTAAATCAGGGGAG | 58.859 | 45.833 | 0.00 | 0.00 | 42.25 | 4.30 |
459 | 461 | 5.103643 | TGCTACTACTCTAAATCAGGGGAGA | 60.104 | 44.000 | 0.00 | 0.00 | 38.06 | 3.71 |
460 | 462 | 5.242171 | GCTACTACTCTAAATCAGGGGAGAC | 59.758 | 48.000 | 0.00 | 0.00 | 38.06 | 3.36 |
461 | 463 | 5.208294 | ACTACTCTAAATCAGGGGAGACA | 57.792 | 43.478 | 0.00 | 0.00 | 38.06 | 3.41 |
462 | 464 | 4.957327 | ACTACTCTAAATCAGGGGAGACAC | 59.043 | 45.833 | 0.00 | 0.00 | 38.06 | 3.67 |
463 | 465 | 3.791320 | ACTCTAAATCAGGGGAGACACA | 58.209 | 45.455 | 0.00 | 0.00 | 34.58 | 3.72 |
464 | 466 | 3.515901 | ACTCTAAATCAGGGGAGACACAC | 59.484 | 47.826 | 0.00 | 0.00 | 34.58 | 3.82 |
465 | 467 | 3.515502 | CTCTAAATCAGGGGAGACACACA | 59.484 | 47.826 | 0.00 | 0.00 | 34.58 | 3.72 |
466 | 468 | 4.104086 | TCTAAATCAGGGGAGACACACAT | 58.896 | 43.478 | 0.00 | 0.00 | 34.58 | 3.21 |
467 | 469 | 2.795231 | AATCAGGGGAGACACACATG | 57.205 | 50.000 | 0.00 | 0.00 | 34.58 | 3.21 |
468 | 470 | 0.914644 | ATCAGGGGAGACACACATGG | 59.085 | 55.000 | 0.00 | 0.00 | 34.20 | 3.66 |
469 | 471 | 1.377725 | CAGGGGAGACACACATGGC | 60.378 | 63.158 | 0.00 | 0.00 | 34.58 | 4.40 |
471 | 473 | 1.136329 | AGGGGAGACACACATGGCTT | 61.136 | 55.000 | 0.00 | 0.00 | 44.22 | 4.35 |
472 | 474 | 0.962356 | GGGGAGACACACATGGCTTG | 60.962 | 60.000 | 0.00 | 0.00 | 44.22 | 4.01 |
473 | 475 | 0.962356 | GGGAGACACACATGGCTTGG | 60.962 | 60.000 | 5.31 | 0.00 | 44.22 | 3.61 |
474 | 476 | 0.250901 | GGAGACACACATGGCTTGGT | 60.251 | 55.000 | 5.31 | 0.00 | 44.22 | 3.67 |
475 | 477 | 1.160137 | GAGACACACATGGCTTGGTC | 58.840 | 55.000 | 5.31 | 3.23 | 44.22 | 4.02 |
476 | 478 | 0.767375 | AGACACACATGGCTTGGTCT | 59.233 | 50.000 | 5.31 | 5.35 | 44.22 | 3.85 |
477 | 479 | 1.160137 | GACACACATGGCTTGGTCTC | 58.840 | 55.000 | 5.31 | 0.00 | 0.00 | 3.36 |
478 | 480 | 0.250901 | ACACACATGGCTTGGTCTCC | 60.251 | 55.000 | 5.31 | 0.00 | 0.00 | 3.71 |
479 | 481 | 0.962356 | CACACATGGCTTGGTCTCCC | 60.962 | 60.000 | 5.31 | 0.00 | 0.00 | 4.30 |
480 | 482 | 1.379044 | CACATGGCTTGGTCTCCCC | 60.379 | 63.158 | 5.31 | 0.00 | 0.00 | 4.81 |
481 | 483 | 2.276740 | CATGGCTTGGTCTCCCCC | 59.723 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
482 | 484 | 2.204291 | ATGGCTTGGTCTCCCCCA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.96 |
483 | 485 | 2.616458 | ATGGCTTGGTCTCCCCCAC | 61.616 | 63.158 | 0.00 | 0.00 | 33.14 | 4.61 |
484 | 486 | 4.410400 | GGCTTGGTCTCCCCCACG | 62.410 | 72.222 | 0.00 | 0.00 | 33.14 | 4.94 |
485 | 487 | 3.637273 | GCTTGGTCTCCCCCACGT | 61.637 | 66.667 | 0.00 | 0.00 | 33.14 | 4.49 |
486 | 488 | 3.157680 | CTTGGTCTCCCCCACGTT | 58.842 | 61.111 | 0.00 | 0.00 | 33.14 | 3.99 |
487 | 489 | 1.833787 | GCTTGGTCTCCCCCACGTTA | 61.834 | 60.000 | 0.00 | 0.00 | 33.14 | 3.18 |
488 | 490 | 0.036671 | CTTGGTCTCCCCCACGTTAC | 60.037 | 60.000 | 0.00 | 0.00 | 33.14 | 2.50 |
489 | 491 | 0.472352 | TTGGTCTCCCCCACGTTACT | 60.472 | 55.000 | 0.00 | 0.00 | 33.14 | 2.24 |
490 | 492 | 0.901580 | TGGTCTCCCCCACGTTACTC | 60.902 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
491 | 493 | 0.614134 | GGTCTCCCCCACGTTACTCT | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
492 | 494 | 1.264295 | GTCTCCCCCACGTTACTCTT | 58.736 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
493 | 495 | 1.622312 | GTCTCCCCCACGTTACTCTTT | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
494 | 496 | 1.621814 | TCTCCCCCACGTTACTCTTTG | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
495 | 497 | 1.346722 | CTCCCCCACGTTACTCTTTGT | 59.653 | 52.381 | 0.00 | 0.00 | 0.00 | 2.83 |
496 | 498 | 2.564062 | CTCCCCCACGTTACTCTTTGTA | 59.436 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
497 | 499 | 3.175594 | TCCCCCACGTTACTCTTTGTAT | 58.824 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
498 | 500 | 3.583966 | TCCCCCACGTTACTCTTTGTATT | 59.416 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
499 | 501 | 3.937079 | CCCCCACGTTACTCTTTGTATTC | 59.063 | 47.826 | 0.00 | 0.00 | 0.00 | 1.75 |
500 | 502 | 3.937079 | CCCCACGTTACTCTTTGTATTCC | 59.063 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
501 | 503 | 3.615496 | CCCACGTTACTCTTTGTATTCCG | 59.385 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
502 | 504 | 4.487948 | CCACGTTACTCTTTGTATTCCGA | 58.512 | 43.478 | 0.00 | 0.00 | 0.00 | 4.55 |
503 | 505 | 5.107133 | CCACGTTACTCTTTGTATTCCGAT | 58.893 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
504 | 506 | 5.005394 | CCACGTTACTCTTTGTATTCCGATG | 59.995 | 44.000 | 0.00 | 0.00 | 0.00 | 3.84 |
505 | 507 | 5.803461 | CACGTTACTCTTTGTATTCCGATGA | 59.197 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
506 | 508 | 6.475727 | CACGTTACTCTTTGTATTCCGATGAT | 59.524 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
507 | 509 | 7.010183 | CACGTTACTCTTTGTATTCCGATGATT | 59.990 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
508 | 510 | 8.192774 | ACGTTACTCTTTGTATTCCGATGATTA | 58.807 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
509 | 511 | 9.193133 | CGTTACTCTTTGTATTCCGATGATTAT | 57.807 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
513 | 515 | 9.784531 | ACTCTTTGTATTCCGATGATTATCAAT | 57.215 | 29.630 | 0.00 | 0.00 | 32.67 | 2.57 |
515 | 517 | 9.777297 | TCTTTGTATTCCGATGATTATCAATGA | 57.223 | 29.630 | 0.00 | 0.00 | 32.67 | 2.57 |
524 | 526 | 9.573166 | TCCGATGATTATCAATGAATAAAACCT | 57.427 | 29.630 | 0.00 | 0.00 | 32.67 | 3.50 |
534 | 536 | 8.877864 | TCAATGAATAAAACCTAGTGGATTGT | 57.122 | 30.769 | 0.00 | 0.00 | 37.04 | 2.71 |
535 | 537 | 8.739039 | TCAATGAATAAAACCTAGTGGATTGTG | 58.261 | 33.333 | 0.00 | 0.00 | 37.04 | 3.33 |
536 | 538 | 6.509418 | TGAATAAAACCTAGTGGATTGTGC | 57.491 | 37.500 | 0.00 | 0.00 | 37.04 | 4.57 |
537 | 539 | 6.245408 | TGAATAAAACCTAGTGGATTGTGCT | 58.755 | 36.000 | 0.00 | 0.00 | 37.04 | 4.40 |
538 | 540 | 7.398829 | TGAATAAAACCTAGTGGATTGTGCTA | 58.601 | 34.615 | 0.00 | 0.00 | 37.04 | 3.49 |
539 | 541 | 7.885922 | TGAATAAAACCTAGTGGATTGTGCTAA | 59.114 | 33.333 | 0.00 | 0.00 | 37.04 | 3.09 |
540 | 542 | 8.644374 | AATAAAACCTAGTGGATTGTGCTAAA | 57.356 | 30.769 | 0.00 | 0.00 | 37.04 | 1.85 |
541 | 543 | 6.969993 | AAAACCTAGTGGATTGTGCTAAAA | 57.030 | 33.333 | 0.00 | 0.00 | 37.04 | 1.52 |
542 | 544 | 6.575162 | AAACCTAGTGGATTGTGCTAAAAG | 57.425 | 37.500 | 0.00 | 0.00 | 37.04 | 2.27 |
543 | 545 | 5.499004 | ACCTAGTGGATTGTGCTAAAAGA | 57.501 | 39.130 | 0.00 | 0.00 | 37.04 | 2.52 |
544 | 546 | 5.876357 | ACCTAGTGGATTGTGCTAAAAGAA | 58.124 | 37.500 | 0.00 | 0.00 | 37.04 | 2.52 |
545 | 547 | 6.303839 | ACCTAGTGGATTGTGCTAAAAGAAA | 58.696 | 36.000 | 0.00 | 0.00 | 37.04 | 2.52 |
546 | 548 | 6.775629 | ACCTAGTGGATTGTGCTAAAAGAAAA | 59.224 | 34.615 | 0.00 | 0.00 | 37.04 | 2.29 |
576 | 578 | 0.814457 | GCCGAATAATTGGTGTGCCA | 59.186 | 50.000 | 0.00 | 0.00 | 44.38 | 4.92 |
599 | 601 | 3.056250 | ACATCTCCACAACAGCTCTAGTG | 60.056 | 47.826 | 2.72 | 2.72 | 0.00 | 2.74 |
645 | 647 | 2.908015 | GTGGGCAGCCGATTCCTA | 59.092 | 61.111 | 5.00 | 0.00 | 0.00 | 2.94 |
647 | 649 | 1.992834 | TGGGCAGCCGATTCCTACA | 60.993 | 57.895 | 5.00 | 0.00 | 0.00 | 2.74 |
720 | 722 | 0.036388 | CAGCCCCTAAGTCTCGCAAA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
725 | 727 | 0.036388 | CCTAAGTCTCGCAAAGGGCA | 60.036 | 55.000 | 0.00 | 0.00 | 45.17 | 5.36 |
741 | 743 | 1.393603 | GGCAAGAAATAGTCCTGGCC | 58.606 | 55.000 | 0.00 | 0.00 | 37.29 | 5.36 |
835 | 1820 | 1.576356 | CTAAAGGGCTCTGCATCGTC | 58.424 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
942 | 1932 | 1.388837 | GCCTCGTCTCTTCCTCCTCC | 61.389 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1027 | 2017 | 4.899239 | GGCACCTCAGATCCGGCG | 62.899 | 72.222 | 0.00 | 0.00 | 0.00 | 6.46 |
1100 | 2090 | 1.082206 | TCCCGATTCCCTTCCCTGT | 59.918 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
1120 | 2110 | 2.658548 | CCCCCTCTTTGTTTGGCTC | 58.341 | 57.895 | 0.00 | 0.00 | 0.00 | 4.70 |
1138 | 2128 | 3.004524 | GGCTCAATCAGAAGATGCCATTC | 59.995 | 47.826 | 0.00 | 0.00 | 39.45 | 2.67 |
1173 | 2163 | 2.735237 | CCCGTCGATCCCCTTAGC | 59.265 | 66.667 | 0.00 | 0.00 | 0.00 | 3.09 |
1174 | 2164 | 1.833049 | CCCGTCGATCCCCTTAGCT | 60.833 | 63.158 | 0.00 | 0.00 | 0.00 | 3.32 |
1175 | 2165 | 1.364171 | CCGTCGATCCCCTTAGCTG | 59.636 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
1176 | 2166 | 1.364171 | CGTCGATCCCCTTAGCTGG | 59.636 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
1210 | 2200 | 0.883833 | CCTTGTGTTGCTGACATCCC | 59.116 | 55.000 | 0.00 | 0.00 | 41.10 | 3.85 |
1299 | 2294 | 0.728542 | GGTCGTTGGTTTTGACGTGT | 59.271 | 50.000 | 0.00 | 0.00 | 40.03 | 4.49 |
1302 | 2297 | 3.002553 | GGTCGTTGGTTTTGACGTGTTAT | 59.997 | 43.478 | 0.00 | 0.00 | 40.03 | 1.89 |
1315 | 2310 | 4.035091 | TGACGTGTTATTTATGATGCAGGC | 59.965 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
1338 | 2333 | 4.966787 | GGGGGTTGGCAACGCAGA | 62.967 | 66.667 | 37.37 | 0.00 | 45.24 | 4.26 |
1459 | 2454 | 4.023021 | AGTTTAGGACCGCGAGATTCTATC | 60.023 | 45.833 | 8.23 | 0.00 | 0.00 | 2.08 |
1460 | 2455 | 2.279935 | AGGACCGCGAGATTCTATCT | 57.720 | 50.000 | 8.23 | 0.00 | 43.70 | 1.98 |
1461 | 2456 | 3.420300 | AGGACCGCGAGATTCTATCTA | 57.580 | 47.619 | 8.23 | 0.00 | 40.38 | 1.98 |
1462 | 2457 | 3.958018 | AGGACCGCGAGATTCTATCTAT | 58.042 | 45.455 | 8.23 | 0.00 | 40.38 | 1.98 |
1477 | 2472 | 5.340803 | TCTATCTATGTTCGTTGTGAGTGC | 58.659 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
1489 | 2484 | 1.001974 | TGTGAGTGCCGCAGATTACTT | 59.998 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
1533 | 2528 | 4.524802 | AGGGACCATAAGAATCATGCAA | 57.475 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
1571 | 2566 | 0.524862 | CTGCCTGCGCAAAGAAATCT | 59.475 | 50.000 | 13.05 | 0.00 | 46.66 | 2.40 |
1603 | 2598 | 5.610557 | TCTTGTTGGGATCCCATATGTGATA | 59.389 | 40.000 | 34.21 | 14.07 | 46.64 | 2.15 |
1604 | 2599 | 6.275381 | TCTTGTTGGGATCCCATATGTGATAT | 59.725 | 38.462 | 34.21 | 0.00 | 46.64 | 1.63 |
1617 | 2612 | 6.017687 | CCATATGTGATATGTCATTATGGCCG | 60.018 | 42.308 | 21.05 | 7.79 | 41.45 | 6.13 |
1653 | 2648 | 6.231211 | TCTTGAGAAACTTAGCCTTTACTGG | 58.769 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1741 | 2834 | 6.706055 | TCACTCAAATTAGTTTACTCAGCG | 57.294 | 37.500 | 0.00 | 0.00 | 0.00 | 5.18 |
2445 | 3543 | 9.114952 | TCTGTTATGATGTTGTTTTCAGTTGTA | 57.885 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
2482 | 3580 | 6.866770 | CCTAATTTAAGTATCGATCGCAGGAA | 59.133 | 38.462 | 11.09 | 0.00 | 0.00 | 3.36 |
2823 | 3921 | 7.332678 | TCTCAGTGTTCACTTTCATCACATATG | 59.667 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
3074 | 4174 | 6.724893 | AACTAAAATGCTTGTTAGTTGGGT | 57.275 | 33.333 | 21.25 | 3.75 | 44.78 | 4.51 |
3102 | 4204 | 7.445121 | TCTCCTTTCATGTGCCTAATAGTATG | 58.555 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
3160 | 4262 | 6.206787 | TGGGGGTTTAGTACTCATTGAGATA | 58.793 | 40.000 | 20.33 | 7.19 | 33.32 | 1.98 |
3245 | 4389 | 7.201848 | CCTGCATGAGCTAAAATTCATTCCTTA | 60.202 | 37.037 | 0.00 | 0.00 | 42.74 | 2.69 |
3345 | 4490 | 2.805671 | CGTTTGTACTTGCCATCACTCA | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3413 | 4725 | 6.097839 | TGTTAACGAGGAGCTATTACCTTGAT | 59.902 | 38.462 | 12.36 | 4.36 | 39.36 | 2.57 |
3475 | 4789 | 2.771435 | TGCGTGGATGCATTCTCTG | 58.229 | 52.632 | 6.53 | 0.99 | 40.62 | 3.35 |
3737 | 5051 | 2.775911 | TTCTCTGCAGATTGACCAGG | 57.224 | 50.000 | 18.63 | 2.66 | 0.00 | 4.45 |
3856 | 5170 | 4.524328 | CCCTTTGACATCTAACTGCCTTTT | 59.476 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
3911 | 5225 | 1.372087 | CGCTGAAGGTTCCCTCATGC | 61.372 | 60.000 | 0.00 | 0.00 | 30.89 | 4.06 |
3962 | 5276 | 7.404671 | AAAAGCTTTCCTTTACAAGAGAACA | 57.595 | 32.000 | 13.10 | 0.00 | 42.82 | 3.18 |
3963 | 5277 | 7.588497 | AAAGCTTTCCTTTACAAGAGAACAT | 57.412 | 32.000 | 5.69 | 0.00 | 41.86 | 2.71 |
4003 | 5317 | 1.742308 | TGTGGGTTAGGAAGAAGCCT | 58.258 | 50.000 | 6.01 | 0.00 | 45.47 | 4.58 |
4113 | 5430 | 7.985634 | TGTAATTTTTGTTTGAAGTGCTCTC | 57.014 | 32.000 | 0.00 | 0.00 | 0.00 | 3.20 |
4118 | 5435 | 9.651913 | AATTTTTGTTTGAAGTGCTCTCTTTTA | 57.348 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
4132 | 5449 | 6.072119 | TGCTCTCTTTTACTCGTATTCAGTGA | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
4181 | 5499 | 4.216257 | ACAGTACATTTCGCTGCATTTTCT | 59.784 | 37.500 | 0.00 | 0.00 | 33.87 | 2.52 |
4194 | 5512 | 3.512329 | TGCATTTTCTCATGAGCATTGGT | 59.488 | 39.130 | 18.36 | 0.00 | 0.00 | 3.67 |
4253 | 5571 | 1.884497 | CGCCCCAACCTACACAATGAA | 60.884 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
4254 | 5572 | 2.456577 | GCCCCAACCTACACAATGAAT | 58.543 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
4255 | 5573 | 2.427095 | GCCCCAACCTACACAATGAATC | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4256 | 5574 | 3.877735 | GCCCCAACCTACACAATGAATCT | 60.878 | 47.826 | 0.00 | 0.00 | 0.00 | 2.40 |
4257 | 5575 | 4.627741 | GCCCCAACCTACACAATGAATCTA | 60.628 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
4258 | 5576 | 5.694995 | CCCCAACCTACACAATGAATCTAT | 58.305 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
4259 | 5577 | 6.690460 | GCCCCAACCTACACAATGAATCTATA | 60.690 | 42.308 | 0.00 | 0.00 | 0.00 | 1.31 |
4260 | 5578 | 7.461749 | CCCCAACCTACACAATGAATCTATAT | 58.538 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
4261 | 5579 | 8.602424 | CCCCAACCTACACAATGAATCTATATA | 58.398 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
4285 | 5603 | 9.753674 | ATAATTTTCCTTTCTCAACCATAGTGA | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
4286 | 5604 | 8.655935 | AATTTTCCTTTCTCAACCATAGTGAT | 57.344 | 30.769 | 0.00 | 0.00 | 0.00 | 3.06 |
4287 | 5605 | 7.687941 | TTTTCCTTTCTCAACCATAGTGATC | 57.312 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4288 | 5606 | 5.011090 | TCCTTTCTCAACCATAGTGATCG | 57.989 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
4289 | 5607 | 4.122776 | CCTTTCTCAACCATAGTGATCGG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
4290 | 5608 | 3.819564 | TTCTCAACCATAGTGATCGGG | 57.180 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
4291 | 5609 | 3.026707 | TCTCAACCATAGTGATCGGGA | 57.973 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
4292 | 5610 | 2.693591 | TCTCAACCATAGTGATCGGGAC | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4293 | 5611 | 2.695666 | CTCAACCATAGTGATCGGGACT | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4294 | 5612 | 2.693591 | TCAACCATAGTGATCGGGACTC | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4295 | 5613 | 1.705873 | ACCATAGTGATCGGGACTCC | 58.294 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4296 | 5614 | 0.969894 | CCATAGTGATCGGGACTCCC | 59.030 | 60.000 | 3.63 | 3.63 | 41.09 | 4.30 |
4305 | 5623 | 3.721868 | GGGACTCCCGGAATGACA | 58.278 | 61.111 | 0.73 | 0.00 | 32.13 | 3.58 |
4306 | 5624 | 2.221918 | GGGACTCCCGGAATGACAT | 58.778 | 57.895 | 0.73 | 0.00 | 32.13 | 3.06 |
4307 | 5625 | 0.179045 | GGGACTCCCGGAATGACATG | 60.179 | 60.000 | 0.73 | 0.00 | 32.13 | 3.21 |
4308 | 5626 | 0.830648 | GGACTCCCGGAATGACATGA | 59.169 | 55.000 | 0.73 | 0.00 | 0.00 | 3.07 |
4349 | 5667 | 2.168521 | CACAACCATAGTGATCGGGACT | 59.831 | 50.000 | 0.00 | 0.00 | 39.30 | 3.85 |
4350 | 5668 | 2.431057 | ACAACCATAGTGATCGGGACTC | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4351 | 5669 | 1.705873 | ACCATAGTGATCGGGACTCC | 58.294 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4352 | 5670 | 0.969894 | CCATAGTGATCGGGACTCCC | 59.030 | 60.000 | 3.63 | 3.63 | 41.09 | 4.30 |
4361 | 5679 | 3.721868 | GGGACTCCCGGAATGACA | 58.278 | 61.111 | 0.73 | 0.00 | 32.13 | 3.58 |
4362 | 5680 | 2.221918 | GGGACTCCCGGAATGACAT | 58.778 | 57.895 | 0.73 | 0.00 | 32.13 | 3.06 |
4363 | 5681 | 0.179045 | GGGACTCCCGGAATGACATG | 60.179 | 60.000 | 0.73 | 0.00 | 32.13 | 3.21 |
4364 | 5682 | 0.830648 | GGACTCCCGGAATGACATGA | 59.169 | 55.000 | 0.73 | 0.00 | 0.00 | 3.07 |
4365 | 5683 | 1.209504 | GGACTCCCGGAATGACATGAA | 59.790 | 52.381 | 0.73 | 0.00 | 0.00 | 2.57 |
4366 | 5684 | 2.158755 | GGACTCCCGGAATGACATGAAT | 60.159 | 50.000 | 0.73 | 0.00 | 0.00 | 2.57 |
4367 | 5685 | 3.134458 | GACTCCCGGAATGACATGAATC | 58.866 | 50.000 | 0.73 | 0.00 | 0.00 | 2.52 |
4368 | 5686 | 2.774234 | ACTCCCGGAATGACATGAATCT | 59.226 | 45.455 | 0.73 | 0.00 | 0.00 | 2.40 |
4369 | 5687 | 3.967326 | ACTCCCGGAATGACATGAATCTA | 59.033 | 43.478 | 0.73 | 0.00 | 0.00 | 1.98 |
4370 | 5688 | 4.594920 | ACTCCCGGAATGACATGAATCTAT | 59.405 | 41.667 | 0.73 | 0.00 | 0.00 | 1.98 |
4371 | 5689 | 5.780282 | ACTCCCGGAATGACATGAATCTATA | 59.220 | 40.000 | 0.73 | 0.00 | 0.00 | 1.31 |
4372 | 5690 | 6.441924 | ACTCCCGGAATGACATGAATCTATAT | 59.558 | 38.462 | 0.73 | 0.00 | 0.00 | 0.86 |
4373 | 5691 | 7.619698 | ACTCCCGGAATGACATGAATCTATATA | 59.380 | 37.037 | 0.73 | 0.00 | 0.00 | 0.86 |
4374 | 5692 | 8.374184 | TCCCGGAATGACATGAATCTATATAA | 57.626 | 34.615 | 0.73 | 0.00 | 0.00 | 0.98 |
4375 | 5693 | 8.992349 | TCCCGGAATGACATGAATCTATATAAT | 58.008 | 33.333 | 0.73 | 0.00 | 0.00 | 1.28 |
4376 | 5694 | 9.618890 | CCCGGAATGACATGAATCTATATAATT | 57.381 | 33.333 | 0.73 | 0.00 | 0.00 | 1.40 |
4397 | 5715 | 7.595819 | AATTTTCCTTTCACAACCATAGTGA | 57.404 | 32.000 | 0.00 | 0.00 | 43.72 | 3.41 |
4398 | 5716 | 7.781324 | ATTTTCCTTTCACAACCATAGTGAT | 57.219 | 32.000 | 0.00 | 0.00 | 44.66 | 3.06 |
4399 | 5717 | 6.817765 | TTTCCTTTCACAACCATAGTGATC | 57.182 | 37.500 | 0.00 | 0.00 | 44.66 | 2.92 |
4400 | 5718 | 4.503910 | TCCTTTCACAACCATAGTGATCG | 58.496 | 43.478 | 0.00 | 0.00 | 44.66 | 3.69 |
4401 | 5719 | 3.623060 | CCTTTCACAACCATAGTGATCGG | 59.377 | 47.826 | 0.00 | 0.00 | 44.66 | 4.18 |
4402 | 5720 | 2.979814 | TCACAACCATAGTGATCGGG | 57.020 | 50.000 | 0.00 | 0.00 | 40.80 | 5.14 |
4403 | 5721 | 2.462723 | TCACAACCATAGTGATCGGGA | 58.537 | 47.619 | 0.00 | 0.00 | 40.80 | 5.14 |
4404 | 5722 | 2.167693 | TCACAACCATAGTGATCGGGAC | 59.832 | 50.000 | 0.00 | 0.00 | 40.80 | 4.46 |
4408 | 5726 | 0.969894 | CCATAGTGATCGGGACTCCC | 59.030 | 60.000 | 3.63 | 3.63 | 41.09 | 4.30 |
4434 | 5754 | 3.250744 | TGACGCCGACTTCATCTAAAAG | 58.749 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
4438 | 5758 | 2.093128 | GCCGACTTCATCTAAAAGGGGA | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
4441 | 5761 | 4.636206 | CCGACTTCATCTAAAAGGGGAAAG | 59.364 | 45.833 | 0.00 | 0.00 | 0.00 | 2.62 |
4442 | 5762 | 5.246307 | CGACTTCATCTAAAAGGGGAAAGT | 58.754 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
4445 | 5765 | 7.290110 | ACTTCATCTAAAAGGGGAAAGTTTG | 57.710 | 36.000 | 0.00 | 0.00 | 0.00 | 2.93 |
4446 | 5766 | 6.839134 | ACTTCATCTAAAAGGGGAAAGTTTGT | 59.161 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
4447 | 5767 | 6.894339 | TCATCTAAAAGGGGAAAGTTTGTC | 57.106 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
4448 | 5768 | 6.610830 | TCATCTAAAAGGGGAAAGTTTGTCT | 58.389 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4449 | 5769 | 7.751646 | TCATCTAAAAGGGGAAAGTTTGTCTA | 58.248 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
4450 | 5770 | 7.664318 | TCATCTAAAAGGGGAAAGTTTGTCTAC | 59.336 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4469 | 5791 | 0.438830 | CGCTAGTTGACTGAAACCGC | 59.561 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
4547 | 5877 | 5.489792 | AGTCCAAGAATAGCTCTGAAACA | 57.510 | 39.130 | 0.00 | 0.00 | 33.37 | 2.83 |
4557 | 5887 | 1.683385 | GCTCTGAAACAGCACCCTTTT | 59.317 | 47.619 | 0.00 | 0.00 | 36.82 | 2.27 |
4597 | 5927 | 0.328926 | TCCGTTAACCAATCCACCCC | 59.671 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
4617 | 5947 | 2.029649 | CCAAGACACAAGAAAGGCCATG | 60.030 | 50.000 | 5.01 | 0.00 | 0.00 | 3.66 |
4653 | 5983 | 1.923864 | TGCACTCACATAATACGCGTG | 59.076 | 47.619 | 24.59 | 7.13 | 0.00 | 5.34 |
4802 | 6137 | 1.254284 | CCCCTCAAGTCACTCGAGCT | 61.254 | 60.000 | 13.61 | 0.00 | 0.00 | 4.09 |
4806 | 6141 | 2.091112 | CAAGTCACTCGAGCTGCCG | 61.091 | 63.158 | 13.61 | 0.00 | 0.00 | 5.69 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 9.438228 | TTTTTCGTAGACATTGTACATATTCCA | 57.562 | 29.630 | 0.00 | 0.00 | 34.32 | 3.53 |
91 | 93 | 9.508642 | TTTCATTGGATTTATTTGGGGTTTTAC | 57.491 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
97 | 99 | 6.479884 | TGGTTTTCATTGGATTTATTTGGGG | 58.520 | 36.000 | 0.00 | 0.00 | 0.00 | 4.96 |
127 | 129 | 7.654568 | TCTTTCTTCCCGTTTTCTTTATTTCC | 58.345 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
189 | 191 | 8.819974 | ACTGTTTGCATATGTTTTCTTTCTTTG | 58.180 | 29.630 | 4.29 | 0.00 | 0.00 | 2.77 |
221 | 223 | 1.269517 | GCGCATGGGTTTTCTTTGTCA | 60.270 | 47.619 | 11.82 | 0.00 | 0.00 | 3.58 |
279 | 281 | 4.042187 | AGCCCATAAACTCAGTCTTGTCTT | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
284 | 286 | 4.373156 | AACAGCCCATAAACTCAGTCTT | 57.627 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
366 | 368 | 9.283768 | TCATGGACGAAATTACATAGCATAAAT | 57.716 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
367 | 369 | 8.669946 | TCATGGACGAAATTACATAGCATAAA | 57.330 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
370 | 372 | 7.566760 | TTTCATGGACGAAATTACATAGCAT | 57.433 | 32.000 | 0.00 | 0.00 | 30.00 | 3.79 |
371 | 373 | 6.993786 | TTTCATGGACGAAATTACATAGCA | 57.006 | 33.333 | 0.00 | 0.00 | 30.00 | 3.49 |
393 | 395 | 6.820152 | GGGCTTCATAATTTCAGCATCTTTTT | 59.180 | 34.615 | 0.00 | 0.00 | 33.64 | 1.94 |
394 | 396 | 6.070653 | TGGGCTTCATAATTTCAGCATCTTTT | 60.071 | 34.615 | 0.00 | 0.00 | 33.64 | 2.27 |
395 | 397 | 5.422970 | TGGGCTTCATAATTTCAGCATCTTT | 59.577 | 36.000 | 0.00 | 0.00 | 33.64 | 2.52 |
396 | 398 | 4.957954 | TGGGCTTCATAATTTCAGCATCTT | 59.042 | 37.500 | 0.00 | 0.00 | 33.64 | 2.40 |
397 | 399 | 4.539726 | TGGGCTTCATAATTTCAGCATCT | 58.460 | 39.130 | 0.00 | 0.00 | 33.64 | 2.90 |
398 | 400 | 4.924305 | TGGGCTTCATAATTTCAGCATC | 57.076 | 40.909 | 0.00 | 0.00 | 33.64 | 3.91 |
399 | 401 | 6.982160 | TTATGGGCTTCATAATTTCAGCAT | 57.018 | 33.333 | 8.31 | 0.00 | 41.81 | 3.79 |
409 | 411 | 6.264528 | ACCTAGCTAGATTATGGGCTTCATA | 58.735 | 40.000 | 22.70 | 0.00 | 37.30 | 2.15 |
410 | 412 | 5.097234 | ACCTAGCTAGATTATGGGCTTCAT | 58.903 | 41.667 | 22.70 | 0.00 | 39.78 | 2.57 |
411 | 413 | 4.493618 | ACCTAGCTAGATTATGGGCTTCA | 58.506 | 43.478 | 22.70 | 0.00 | 36.40 | 3.02 |
412 | 414 | 5.491323 | AACCTAGCTAGATTATGGGCTTC | 57.509 | 43.478 | 22.70 | 0.00 | 36.40 | 3.86 |
413 | 415 | 5.625150 | CAAACCTAGCTAGATTATGGGCTT | 58.375 | 41.667 | 22.70 | 0.00 | 36.40 | 4.35 |
414 | 416 | 4.505742 | GCAAACCTAGCTAGATTATGGGCT | 60.506 | 45.833 | 22.70 | 0.00 | 38.62 | 5.19 |
415 | 417 | 3.753797 | GCAAACCTAGCTAGATTATGGGC | 59.246 | 47.826 | 22.70 | 9.75 | 0.00 | 5.36 |
416 | 418 | 5.234466 | AGCAAACCTAGCTAGATTATGGG | 57.766 | 43.478 | 22.70 | 6.86 | 41.32 | 4.00 |
417 | 419 | 6.998802 | AGTAGCAAACCTAGCTAGATTATGG | 58.001 | 40.000 | 22.70 | 7.62 | 44.54 | 2.74 |
418 | 420 | 8.798402 | AGTAGTAGCAAACCTAGCTAGATTATG | 58.202 | 37.037 | 22.70 | 14.98 | 44.54 | 1.90 |
419 | 421 | 8.943594 | AGTAGTAGCAAACCTAGCTAGATTAT | 57.056 | 34.615 | 22.70 | 10.64 | 44.54 | 1.28 |
420 | 422 | 8.219178 | AGAGTAGTAGCAAACCTAGCTAGATTA | 58.781 | 37.037 | 22.70 | 0.00 | 44.54 | 1.75 |
421 | 423 | 7.064229 | AGAGTAGTAGCAAACCTAGCTAGATT | 58.936 | 38.462 | 22.70 | 8.74 | 44.54 | 2.40 |
422 | 424 | 6.607019 | AGAGTAGTAGCAAACCTAGCTAGAT | 58.393 | 40.000 | 22.70 | 0.61 | 44.54 | 1.98 |
423 | 425 | 6.003859 | AGAGTAGTAGCAAACCTAGCTAGA | 57.996 | 41.667 | 22.70 | 0.00 | 44.54 | 2.43 |
424 | 426 | 7.804843 | TTAGAGTAGTAGCAAACCTAGCTAG | 57.195 | 40.000 | 14.20 | 14.20 | 44.54 | 3.42 |
425 | 427 | 8.763984 | ATTTAGAGTAGTAGCAAACCTAGCTA | 57.236 | 34.615 | 0.00 | 0.00 | 43.25 | 3.32 |
426 | 428 | 7.342284 | TGATTTAGAGTAGTAGCAAACCTAGCT | 59.658 | 37.037 | 0.00 | 0.00 | 45.77 | 3.32 |
427 | 429 | 7.490000 | TGATTTAGAGTAGTAGCAAACCTAGC | 58.510 | 38.462 | 0.00 | 0.00 | 0.00 | 3.42 |
428 | 430 | 8.138712 | CCTGATTTAGAGTAGTAGCAAACCTAG | 58.861 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
429 | 431 | 7.069578 | CCCTGATTTAGAGTAGTAGCAAACCTA | 59.930 | 40.741 | 0.00 | 0.00 | 0.00 | 3.08 |
430 | 432 | 6.127026 | CCCTGATTTAGAGTAGTAGCAAACCT | 60.127 | 42.308 | 0.00 | 0.00 | 0.00 | 3.50 |
431 | 433 | 6.049790 | CCCTGATTTAGAGTAGTAGCAAACC | 58.950 | 44.000 | 0.00 | 0.00 | 0.00 | 3.27 |
432 | 434 | 6.049790 | CCCCTGATTTAGAGTAGTAGCAAAC | 58.950 | 44.000 | 0.00 | 0.00 | 0.00 | 2.93 |
433 | 435 | 5.962031 | TCCCCTGATTTAGAGTAGTAGCAAA | 59.038 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
434 | 436 | 5.525484 | TCCCCTGATTTAGAGTAGTAGCAA | 58.475 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
435 | 437 | 5.103643 | TCTCCCCTGATTTAGAGTAGTAGCA | 60.104 | 44.000 | 0.00 | 0.00 | 0.00 | 3.49 |
436 | 438 | 5.242171 | GTCTCCCCTGATTTAGAGTAGTAGC | 59.758 | 48.000 | 0.00 | 0.00 | 0.00 | 3.58 |
437 | 439 | 6.263617 | GTGTCTCCCCTGATTTAGAGTAGTAG | 59.736 | 46.154 | 0.00 | 0.00 | 0.00 | 2.57 |
438 | 440 | 6.127793 | GTGTCTCCCCTGATTTAGAGTAGTA | 58.872 | 44.000 | 0.00 | 0.00 | 0.00 | 1.82 |
439 | 441 | 4.957327 | GTGTCTCCCCTGATTTAGAGTAGT | 59.043 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
440 | 442 | 4.956700 | TGTGTCTCCCCTGATTTAGAGTAG | 59.043 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
441 | 443 | 4.710375 | GTGTGTCTCCCCTGATTTAGAGTA | 59.290 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
442 | 444 | 3.515901 | GTGTGTCTCCCCTGATTTAGAGT | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
443 | 445 | 3.515502 | TGTGTGTCTCCCCTGATTTAGAG | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
444 | 446 | 3.516586 | TGTGTGTCTCCCCTGATTTAGA | 58.483 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
445 | 447 | 3.981071 | TGTGTGTCTCCCCTGATTTAG | 57.019 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
446 | 448 | 3.054434 | CCATGTGTGTCTCCCCTGATTTA | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
447 | 449 | 2.291153 | CCATGTGTGTCTCCCCTGATTT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
448 | 450 | 1.283029 | CCATGTGTGTCTCCCCTGATT | 59.717 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
449 | 451 | 0.914644 | CCATGTGTGTCTCCCCTGAT | 59.085 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
450 | 452 | 1.841302 | GCCATGTGTGTCTCCCCTGA | 61.841 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
451 | 453 | 1.377725 | GCCATGTGTGTCTCCCCTG | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
452 | 454 | 1.136329 | AAGCCATGTGTGTCTCCCCT | 61.136 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
453 | 455 | 0.962356 | CAAGCCATGTGTGTCTCCCC | 60.962 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
454 | 456 | 0.962356 | CCAAGCCATGTGTGTCTCCC | 60.962 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
455 | 457 | 0.250901 | ACCAAGCCATGTGTGTCTCC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
456 | 458 | 1.160137 | GACCAAGCCATGTGTGTCTC | 58.840 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
457 | 459 | 0.767375 | AGACCAAGCCATGTGTGTCT | 59.233 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
458 | 460 | 1.160137 | GAGACCAAGCCATGTGTGTC | 58.840 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
459 | 461 | 0.250901 | GGAGACCAAGCCATGTGTGT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
460 | 462 | 2.559785 | GGAGACCAAGCCATGTGTG | 58.440 | 57.895 | 0.00 | 0.00 | 0.00 | 3.82 |
473 | 475 | 1.264295 | AAGAGTAACGTGGGGGAGAC | 58.736 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
474 | 476 | 1.621814 | CAAAGAGTAACGTGGGGGAGA | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
475 | 477 | 1.346722 | ACAAAGAGTAACGTGGGGGAG | 59.653 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
476 | 478 | 1.426751 | ACAAAGAGTAACGTGGGGGA | 58.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
477 | 479 | 3.622166 | ATACAAAGAGTAACGTGGGGG | 57.378 | 47.619 | 0.00 | 0.00 | 36.05 | 5.40 |
478 | 480 | 3.937079 | GGAATACAAAGAGTAACGTGGGG | 59.063 | 47.826 | 0.00 | 0.00 | 36.05 | 4.96 |
479 | 481 | 3.615496 | CGGAATACAAAGAGTAACGTGGG | 59.385 | 47.826 | 0.00 | 0.00 | 36.05 | 4.61 |
480 | 482 | 4.487948 | TCGGAATACAAAGAGTAACGTGG | 58.512 | 43.478 | 0.00 | 0.00 | 36.05 | 4.94 |
481 | 483 | 5.803461 | TCATCGGAATACAAAGAGTAACGTG | 59.197 | 40.000 | 0.00 | 0.00 | 36.05 | 4.49 |
482 | 484 | 5.957798 | TCATCGGAATACAAAGAGTAACGT | 58.042 | 37.500 | 0.00 | 0.00 | 36.05 | 3.99 |
483 | 485 | 7.464830 | AATCATCGGAATACAAAGAGTAACG | 57.535 | 36.000 | 0.00 | 0.00 | 36.05 | 3.18 |
487 | 489 | 9.784531 | ATTGATAATCATCGGAATACAAAGAGT | 57.215 | 29.630 | 0.00 | 0.00 | 33.51 | 3.24 |
489 | 491 | 9.777297 | TCATTGATAATCATCGGAATACAAAGA | 57.223 | 29.630 | 0.00 | 0.00 | 33.51 | 2.52 |
498 | 500 | 9.573166 | AGGTTTTATTCATTGATAATCATCGGA | 57.427 | 29.630 | 0.00 | 0.00 | 33.51 | 4.55 |
508 | 510 | 9.479549 | ACAATCCACTAGGTTTTATTCATTGAT | 57.520 | 29.630 | 0.00 | 0.00 | 35.89 | 2.57 |
509 | 511 | 8.739039 | CACAATCCACTAGGTTTTATTCATTGA | 58.261 | 33.333 | 0.00 | 0.00 | 35.89 | 2.57 |
510 | 512 | 7.489113 | GCACAATCCACTAGGTTTTATTCATTG | 59.511 | 37.037 | 0.00 | 0.00 | 35.89 | 2.82 |
511 | 513 | 7.397192 | AGCACAATCCACTAGGTTTTATTCATT | 59.603 | 33.333 | 0.00 | 0.00 | 35.89 | 2.57 |
512 | 514 | 6.891908 | AGCACAATCCACTAGGTTTTATTCAT | 59.108 | 34.615 | 0.00 | 0.00 | 35.89 | 2.57 |
513 | 515 | 6.245408 | AGCACAATCCACTAGGTTTTATTCA | 58.755 | 36.000 | 0.00 | 0.00 | 35.89 | 2.57 |
514 | 516 | 6.759497 | AGCACAATCCACTAGGTTTTATTC | 57.241 | 37.500 | 0.00 | 0.00 | 35.89 | 1.75 |
515 | 517 | 8.644374 | TTTAGCACAATCCACTAGGTTTTATT | 57.356 | 30.769 | 0.00 | 0.00 | 35.89 | 1.40 |
516 | 518 | 8.644374 | TTTTAGCACAATCCACTAGGTTTTAT | 57.356 | 30.769 | 0.00 | 0.00 | 35.89 | 1.40 |
517 | 519 | 7.940137 | TCTTTTAGCACAATCCACTAGGTTTTA | 59.060 | 33.333 | 0.00 | 0.00 | 35.89 | 1.52 |
518 | 520 | 6.775629 | TCTTTTAGCACAATCCACTAGGTTTT | 59.224 | 34.615 | 0.00 | 0.00 | 35.89 | 2.43 |
519 | 521 | 6.303839 | TCTTTTAGCACAATCCACTAGGTTT | 58.696 | 36.000 | 0.00 | 0.00 | 35.89 | 3.27 |
520 | 522 | 5.876357 | TCTTTTAGCACAATCCACTAGGTT | 58.124 | 37.500 | 0.00 | 0.00 | 35.89 | 3.50 |
521 | 523 | 5.499004 | TCTTTTAGCACAATCCACTAGGT | 57.501 | 39.130 | 0.00 | 0.00 | 35.89 | 3.08 |
522 | 524 | 6.817765 | TTTCTTTTAGCACAATCCACTAGG | 57.182 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
523 | 525 | 9.132521 | CAATTTTCTTTTAGCACAATCCACTAG | 57.867 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
524 | 526 | 8.087750 | CCAATTTTCTTTTAGCACAATCCACTA | 58.912 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
525 | 527 | 6.930722 | CCAATTTTCTTTTAGCACAATCCACT | 59.069 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
526 | 528 | 6.928492 | TCCAATTTTCTTTTAGCACAATCCAC | 59.072 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
527 | 529 | 7.060383 | TCCAATTTTCTTTTAGCACAATCCA | 57.940 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
528 | 530 | 7.413328 | GCATCCAATTTTCTTTTAGCACAATCC | 60.413 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
529 | 531 | 7.118101 | TGCATCCAATTTTCTTTTAGCACAATC | 59.882 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
530 | 532 | 6.935771 | TGCATCCAATTTTCTTTTAGCACAAT | 59.064 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
531 | 533 | 6.286758 | TGCATCCAATTTTCTTTTAGCACAA | 58.713 | 32.000 | 0.00 | 0.00 | 0.00 | 3.33 |
532 | 534 | 5.851720 | TGCATCCAATTTTCTTTTAGCACA | 58.148 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
533 | 535 | 6.619232 | GCTTGCATCCAATTTTCTTTTAGCAC | 60.619 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
534 | 536 | 5.409214 | GCTTGCATCCAATTTTCTTTTAGCA | 59.591 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
535 | 537 | 5.163824 | GGCTTGCATCCAATTTTCTTTTAGC | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 3.09 |
536 | 538 | 5.062558 | CGGCTTGCATCCAATTTTCTTTTAG | 59.937 | 40.000 | 6.37 | 0.00 | 0.00 | 1.85 |
537 | 539 | 4.928615 | CGGCTTGCATCCAATTTTCTTTTA | 59.071 | 37.500 | 6.37 | 0.00 | 0.00 | 1.52 |
538 | 540 | 3.747529 | CGGCTTGCATCCAATTTTCTTTT | 59.252 | 39.130 | 6.37 | 0.00 | 0.00 | 2.27 |
539 | 541 | 3.006752 | TCGGCTTGCATCCAATTTTCTTT | 59.993 | 39.130 | 6.37 | 0.00 | 0.00 | 2.52 |
540 | 542 | 2.562298 | TCGGCTTGCATCCAATTTTCTT | 59.438 | 40.909 | 6.37 | 0.00 | 0.00 | 2.52 |
541 | 543 | 2.170166 | TCGGCTTGCATCCAATTTTCT | 58.830 | 42.857 | 6.37 | 0.00 | 0.00 | 2.52 |
542 | 544 | 2.652941 | TCGGCTTGCATCCAATTTTC | 57.347 | 45.000 | 6.37 | 0.00 | 0.00 | 2.29 |
543 | 545 | 3.615224 | ATTCGGCTTGCATCCAATTTT | 57.385 | 38.095 | 6.37 | 0.00 | 0.00 | 1.82 |
544 | 546 | 4.734398 | TTATTCGGCTTGCATCCAATTT | 57.266 | 36.364 | 6.37 | 0.00 | 0.00 | 1.82 |
545 | 547 | 4.942761 | ATTATTCGGCTTGCATCCAATT | 57.057 | 36.364 | 6.37 | 0.00 | 0.00 | 2.32 |
546 | 548 | 4.501915 | CCAATTATTCGGCTTGCATCCAAT | 60.502 | 41.667 | 6.37 | 7.14 | 0.00 | 3.16 |
576 | 578 | 3.580458 | ACTAGAGCTGTTGTGGAGATGTT | 59.420 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
664 | 666 | 4.408821 | AGCCTTGCCAATCGCGGA | 62.409 | 61.111 | 6.13 | 0.00 | 42.08 | 5.54 |
720 | 722 | 1.064389 | GCCAGGACTATTTCTTGCCCT | 60.064 | 52.381 | 0.00 | 0.00 | 29.70 | 5.19 |
725 | 727 | 1.681229 | TGGGGCCAGGACTATTTCTT | 58.319 | 50.000 | 4.39 | 0.00 | 0.00 | 2.52 |
741 | 743 | 1.301244 | CGGCTCGATCATCCTTGGG | 60.301 | 63.158 | 0.00 | 0.00 | 0.00 | 4.12 |
765 | 767 | 2.922740 | TCGTCAGGGCTACTTGTTTT | 57.077 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
777 | 779 | 2.046892 | CTGGTGGGCTTCGTCAGG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
942 | 1932 | 3.537874 | GGAGATCGGGTCGGGTGG | 61.538 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
1027 | 2017 | 4.475135 | GGCTTGGAGGAGCGGGAC | 62.475 | 72.222 | 0.00 | 0.00 | 43.62 | 4.46 |
1083 | 2073 | 1.527370 | GACAGGGAAGGGAATCGGG | 59.473 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
1107 | 2097 | 5.132502 | TCTTCTGATTGAGCCAAACAAAGA | 58.867 | 37.500 | 12.52 | 12.52 | 30.26 | 2.52 |
1120 | 2110 | 2.626743 | GGGGAATGGCATCTTCTGATTG | 59.373 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1138 | 2128 | 0.106894 | GGCTACCGAAATCTGAGGGG | 59.893 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1173 | 2163 | 0.249657 | GGCGAACCTAGATCAGCCAG | 60.250 | 60.000 | 17.63 | 0.00 | 43.65 | 4.85 |
1174 | 2164 | 1.823295 | GGCGAACCTAGATCAGCCA | 59.177 | 57.895 | 17.63 | 0.00 | 43.65 | 4.75 |
1175 | 2165 | 4.760757 | GGCGAACCTAGATCAGCC | 57.239 | 61.111 | 0.00 | 12.02 | 37.61 | 4.85 |
1227 | 2217 | 5.171476 | ACGAGACGACAGATTTGAATCAAT | 58.829 | 37.500 | 0.00 | 0.00 | 37.89 | 2.57 |
1275 | 2265 | 1.935199 | GTCAAAACCAACGACCGAAGA | 59.065 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
1276 | 2266 | 1.332552 | CGTCAAAACCAACGACCGAAG | 60.333 | 52.381 | 0.00 | 0.00 | 41.29 | 3.79 |
1278 | 2268 | 0.459934 | ACGTCAAAACCAACGACCGA | 60.460 | 50.000 | 1.52 | 0.00 | 41.29 | 4.69 |
1279 | 2269 | 0.315544 | CACGTCAAAACCAACGACCG | 60.316 | 55.000 | 1.52 | 0.00 | 41.29 | 4.79 |
1289 | 2284 | 7.026562 | CCTGCATCATAAATAACACGTCAAAA | 58.973 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
1299 | 2294 | 3.723260 | TCGACGCCTGCATCATAAATAA | 58.277 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
1302 | 2297 | 1.570813 | CTCGACGCCTGCATCATAAA | 58.429 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1315 | 2310 | 4.323477 | TTGCCAACCCCCTCGACG | 62.323 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
1326 | 2321 | 0.320858 | TTATCCGTCTGCGTTGCCAA | 60.321 | 50.000 | 0.00 | 0.00 | 36.15 | 4.52 |
1335 | 2330 | 3.223435 | TCTCCTTAGGCTTATCCGTCTG | 58.777 | 50.000 | 0.00 | 0.00 | 40.77 | 3.51 |
1338 | 2333 | 3.371965 | TGTTCTCCTTAGGCTTATCCGT | 58.628 | 45.455 | 0.00 | 0.00 | 40.77 | 4.69 |
1382 | 2377 | 1.805943 | GCAACAATCCAACCAAATGCC | 59.194 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
1459 | 2454 | 1.390123 | CGGCACTCACAACGAACATAG | 59.610 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
1460 | 2455 | 1.424403 | CGGCACTCACAACGAACATA | 58.576 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1461 | 2456 | 1.841663 | GCGGCACTCACAACGAACAT | 61.842 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1462 | 2457 | 2.530497 | GCGGCACTCACAACGAACA | 61.530 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
1477 | 2472 | 1.659098 | GACCGTCAAAGTAATCTGCGG | 59.341 | 52.381 | 0.00 | 0.00 | 42.86 | 5.69 |
1533 | 2528 | 2.297033 | CAGGCAGGCAAACATAAACAGT | 59.703 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
1571 | 2566 | 5.398236 | TGGGATCCCAACAAGAAAAATGTA | 58.602 | 37.500 | 32.09 | 1.01 | 44.12 | 2.29 |
1603 | 2598 | 3.648339 | GCATTTCGGCCATAATGACAT | 57.352 | 42.857 | 23.92 | 1.42 | 34.44 | 3.06 |
1617 | 2612 | 6.264841 | AGTTTCTCAAGATCAAGGCATTTC | 57.735 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
1675 | 2670 | 2.884639 | ACAAGCATGGTTACACTCCAAC | 59.115 | 45.455 | 10.31 | 0.00 | 38.52 | 3.77 |
1715 | 2808 | 7.689812 | CGCTGAGTAAACTAATTTGAGTGATTG | 59.310 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
1716 | 2809 | 7.602644 | TCGCTGAGTAAACTAATTTGAGTGATT | 59.397 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
1741 | 2834 | 3.002246 | TGCAACGTGAACAATCTGTCTTC | 59.998 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
2258 | 3352 | 9.708222 | CACATGCTGCTAAAAACTATAACTTAG | 57.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.18 |
2823 | 3921 | 3.676646 | GCACATGCATCAAACTTCCTTTC | 59.323 | 43.478 | 0.00 | 0.00 | 41.59 | 2.62 |
2928 | 4026 | 2.441750 | AGTAAACCAGGAAGGCACAAGA | 59.558 | 45.455 | 0.00 | 0.00 | 43.14 | 3.02 |
3074 | 4174 | 4.908601 | TTAGGCACATGAAAGGAGAGAA | 57.091 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
3102 | 4204 | 3.609853 | TGTTAGTTCACTGGATCATGCC | 58.390 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
3345 | 4490 | 7.939588 | AGATAAGCCTGTTAAGAGTTGAACTTT | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
3413 | 4725 | 9.442047 | AAAACATGACAAGTTTTCCACAATTTA | 57.558 | 25.926 | 14.15 | 0.00 | 43.53 | 1.40 |
3475 | 4789 | 6.256757 | GTCAGGATCTATAACAGAAGTTGCAC | 59.743 | 42.308 | 0.00 | 0.00 | 38.69 | 4.57 |
3737 | 5051 | 1.417890 | CACCAGTCCTCCCATGATACC | 59.582 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
3856 | 5170 | 3.074390 | ACTCTGGTGTTGATTTGGATCCA | 59.926 | 43.478 | 11.44 | 11.44 | 0.00 | 3.41 |
3886 | 5200 | 3.353836 | GAACCTTCAGCGGCGCAA | 61.354 | 61.111 | 35.02 | 19.42 | 0.00 | 4.85 |
3911 | 5225 | 1.066573 | AGACCACATCGAAGAAGCAGG | 60.067 | 52.381 | 0.00 | 0.00 | 43.58 | 4.85 |
3962 | 5276 | 8.137437 | CCACAAGACAAAATAAAACAGAGTGAT | 58.863 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3963 | 5277 | 7.416213 | CCCACAAGACAAAATAAAACAGAGTGA | 60.416 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
4003 | 5317 | 8.641541 | AGAAAGGAAATTAAAGATTGTTCAGCA | 58.358 | 29.630 | 0.00 | 0.00 | 0.00 | 4.41 |
4098 | 5415 | 5.234329 | CGAGTAAAAGAGAGCACTTCAAACA | 59.766 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4113 | 5430 | 9.569167 | TTCATACTCACTGAATACGAGTAAAAG | 57.431 | 33.333 | 0.00 | 0.00 | 43.46 | 2.27 |
4118 | 5435 | 7.489435 | CACAATTCATACTCACTGAATACGAGT | 59.511 | 37.037 | 0.00 | 0.00 | 41.33 | 4.18 |
4153 | 5471 | 2.672874 | GCAGCGAAATGTACTGTCATCA | 59.327 | 45.455 | 0.00 | 0.00 | 33.87 | 3.07 |
4181 | 5499 | 1.005097 | AGGCTCAACCAATGCTCATGA | 59.995 | 47.619 | 0.00 | 0.00 | 43.14 | 3.07 |
4219 | 5537 | 1.195115 | GGGGCGCTAGATATGATCCA | 58.805 | 55.000 | 7.64 | 0.00 | 0.00 | 3.41 |
4259 | 5577 | 9.753674 | TCACTATGGTTGAGAAAGGAAAATTAT | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
4260 | 5578 | 9.753674 | ATCACTATGGTTGAGAAAGGAAAATTA | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
4261 | 5579 | 8.655935 | ATCACTATGGTTGAGAAAGGAAAATT | 57.344 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
4262 | 5580 | 7.066284 | CGATCACTATGGTTGAGAAAGGAAAAT | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
4263 | 5581 | 6.371548 | CGATCACTATGGTTGAGAAAGGAAAA | 59.628 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
4264 | 5582 | 5.874810 | CGATCACTATGGTTGAGAAAGGAAA | 59.125 | 40.000 | 0.00 | 0.00 | 0.00 | 3.13 |
4265 | 5583 | 5.419542 | CGATCACTATGGTTGAGAAAGGAA | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
4266 | 5584 | 4.141937 | CCGATCACTATGGTTGAGAAAGGA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
4267 | 5585 | 4.122776 | CCGATCACTATGGTTGAGAAAGG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 3.11 |
4268 | 5586 | 4.122776 | CCCGATCACTATGGTTGAGAAAG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
4269 | 5587 | 3.772572 | TCCCGATCACTATGGTTGAGAAA | 59.227 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4270 | 5588 | 3.132289 | GTCCCGATCACTATGGTTGAGAA | 59.868 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
4271 | 5589 | 2.693591 | GTCCCGATCACTATGGTTGAGA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
4272 | 5590 | 2.695666 | AGTCCCGATCACTATGGTTGAG | 59.304 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4273 | 5591 | 2.693591 | GAGTCCCGATCACTATGGTTGA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4274 | 5592 | 2.224066 | GGAGTCCCGATCACTATGGTTG | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.77 |
4275 | 5593 | 2.040178 | GGAGTCCCGATCACTATGGTT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
4276 | 5594 | 1.705873 | GGAGTCCCGATCACTATGGT | 58.294 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4277 | 5595 | 0.969894 | GGGAGTCCCGATCACTATGG | 59.030 | 60.000 | 13.89 | 0.00 | 32.13 | 2.74 |
4288 | 5606 | 0.179045 | CATGTCATTCCGGGAGTCCC | 60.179 | 60.000 | 19.37 | 19.37 | 41.09 | 4.46 |
4289 | 5607 | 0.830648 | TCATGTCATTCCGGGAGTCC | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4290 | 5608 | 2.691409 | TTCATGTCATTCCGGGAGTC | 57.309 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4291 | 5609 | 2.774234 | AGATTCATGTCATTCCGGGAGT | 59.226 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
4292 | 5610 | 3.482156 | AGATTCATGTCATTCCGGGAG | 57.518 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
4293 | 5611 | 6.874278 | ATATAGATTCATGTCATTCCGGGA | 57.126 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
4294 | 5612 | 9.618890 | AATTATATAGATTCATGTCATTCCGGG | 57.381 | 33.333 | 0.00 | 0.00 | 0.00 | 5.73 |
4327 | 5645 | 2.167693 | GTCCCGATCACTATGGTTGTGA | 59.832 | 50.000 | 0.00 | 0.00 | 46.58 | 3.58 |
4349 | 5667 | 6.874278 | ATATAGATTCATGTCATTCCGGGA | 57.126 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
4350 | 5668 | 9.618890 | AATTATATAGATTCATGTCATTCCGGG | 57.381 | 33.333 | 0.00 | 0.00 | 0.00 | 5.73 |
4371 | 5689 | 9.308000 | TCACTATGGTTGTGAAAGGAAAATTAT | 57.692 | 29.630 | 0.00 | 0.00 | 40.89 | 1.28 |
4372 | 5690 | 8.698973 | TCACTATGGTTGTGAAAGGAAAATTA | 57.301 | 30.769 | 0.00 | 0.00 | 40.89 | 1.40 |
4373 | 5691 | 7.595819 | TCACTATGGTTGTGAAAGGAAAATT | 57.404 | 32.000 | 0.00 | 0.00 | 40.89 | 1.82 |
4374 | 5692 | 7.362056 | CGATCACTATGGTTGTGAAAGGAAAAT | 60.362 | 37.037 | 0.66 | 0.00 | 45.82 | 1.82 |
4375 | 5693 | 6.072728 | CGATCACTATGGTTGTGAAAGGAAAA | 60.073 | 38.462 | 0.66 | 0.00 | 45.82 | 2.29 |
4376 | 5694 | 5.411361 | CGATCACTATGGTTGTGAAAGGAAA | 59.589 | 40.000 | 0.66 | 0.00 | 45.82 | 3.13 |
4377 | 5695 | 4.935205 | CGATCACTATGGTTGTGAAAGGAA | 59.065 | 41.667 | 0.66 | 0.00 | 45.82 | 3.36 |
4378 | 5696 | 4.503910 | CGATCACTATGGTTGTGAAAGGA | 58.496 | 43.478 | 0.66 | 0.00 | 45.82 | 3.36 |
4379 | 5697 | 3.623060 | CCGATCACTATGGTTGTGAAAGG | 59.377 | 47.826 | 0.66 | 4.18 | 45.82 | 3.11 |
4380 | 5698 | 3.623060 | CCCGATCACTATGGTTGTGAAAG | 59.377 | 47.826 | 0.66 | 0.00 | 45.82 | 2.62 |
4381 | 5699 | 3.262151 | TCCCGATCACTATGGTTGTGAAA | 59.738 | 43.478 | 0.66 | 0.00 | 45.82 | 2.69 |
4382 | 5700 | 2.835156 | TCCCGATCACTATGGTTGTGAA | 59.165 | 45.455 | 0.66 | 0.00 | 45.82 | 3.18 |
4383 | 5701 | 2.167693 | GTCCCGATCACTATGGTTGTGA | 59.832 | 50.000 | 0.00 | 0.00 | 46.58 | 3.58 |
4384 | 5702 | 2.168521 | AGTCCCGATCACTATGGTTGTG | 59.831 | 50.000 | 0.00 | 0.00 | 36.82 | 3.33 |
4385 | 5703 | 2.431057 | GAGTCCCGATCACTATGGTTGT | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4386 | 5704 | 2.224066 | GGAGTCCCGATCACTATGGTTG | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.77 |
4387 | 5705 | 2.040178 | GGAGTCCCGATCACTATGGTT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
4388 | 5706 | 1.705873 | GGAGTCCCGATCACTATGGT | 58.294 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4389 | 5707 | 0.969894 | GGGAGTCCCGATCACTATGG | 59.030 | 60.000 | 13.89 | 0.00 | 32.13 | 2.74 |
4400 | 5718 | 2.499685 | CGTCATTCCGGGAGTCCC | 59.500 | 66.667 | 19.37 | 19.37 | 41.09 | 4.46 |
4401 | 5719 | 2.202892 | GCGTCATTCCGGGAGTCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4402 | 5720 | 2.202892 | GGCGTCATTCCGGGAGTC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
4403 | 5721 | 4.143333 | CGGCGTCATTCCGGGAGT | 62.143 | 66.667 | 0.00 | 0.00 | 42.99 | 3.85 |
4404 | 5722 | 3.833645 | TCGGCGTCATTCCGGGAG | 61.834 | 66.667 | 6.85 | 0.00 | 46.43 | 4.30 |
4408 | 5726 | 2.710297 | GATGAAGTCGGCGTCATTCCG | 61.710 | 57.143 | 19.28 | 0.00 | 42.36 | 4.30 |
4416 | 5736 | 1.933853 | CCCTTTTAGATGAAGTCGGCG | 59.066 | 52.381 | 0.00 | 0.00 | 0.00 | 6.46 |
4434 | 5754 | 2.180432 | AGCGTAGACAAACTTTCCCC | 57.820 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
4438 | 5758 | 5.462398 | CAGTCAACTAGCGTAGACAAACTTT | 59.538 | 40.000 | 0.00 | 0.00 | 33.56 | 2.66 |
4441 | 5761 | 4.543692 | TCAGTCAACTAGCGTAGACAAAC | 58.456 | 43.478 | 0.00 | 0.00 | 33.56 | 2.93 |
4442 | 5762 | 4.841443 | TCAGTCAACTAGCGTAGACAAA | 57.159 | 40.909 | 0.00 | 0.00 | 33.56 | 2.83 |
4445 | 5765 | 3.919197 | GGTTTCAGTCAACTAGCGTAGAC | 59.081 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
4446 | 5766 | 3.365666 | CGGTTTCAGTCAACTAGCGTAGA | 60.366 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
4447 | 5767 | 2.915463 | CGGTTTCAGTCAACTAGCGTAG | 59.085 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4448 | 5768 | 2.923605 | GCGGTTTCAGTCAACTAGCGTA | 60.924 | 50.000 | 5.30 | 0.00 | 32.84 | 4.42 |
4449 | 5769 | 1.779569 | CGGTTTCAGTCAACTAGCGT | 58.220 | 50.000 | 0.00 | 0.00 | 0.00 | 5.07 |
4450 | 5770 | 0.438830 | GCGGTTTCAGTCAACTAGCG | 59.561 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4469 | 5791 | 4.437794 | CGACATCCAACATGAGAAATGTGG | 60.438 | 45.833 | 0.00 | 2.07 | 31.80 | 4.17 |
4509 | 5831 | 1.542987 | GGACTAGTCGATCGGGTAGCT | 60.543 | 57.143 | 16.41 | 8.50 | 0.00 | 3.32 |
4547 | 5877 | 0.661020 | CGTCGAACAAAAAGGGTGCT | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4557 | 5887 | 2.702898 | TTCCGTGTATCGTCGAACAA | 57.297 | 45.000 | 0.00 | 0.00 | 37.94 | 2.83 |
4597 | 5927 | 2.608752 | GCATGGCCTTTCTTGTGTCTTG | 60.609 | 50.000 | 3.32 | 0.00 | 0.00 | 3.02 |
4730 | 6060 | 1.529796 | CACCCCGCTTATTAGGCCA | 59.470 | 57.895 | 5.01 | 0.00 | 0.00 | 5.36 |
4731 | 6061 | 1.228154 | CCACCCCGCTTATTAGGCC | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
4732 | 6062 | 1.897137 | GCCACCCCGCTTATTAGGC | 60.897 | 63.158 | 0.00 | 0.00 | 0.00 | 3.93 |
4733 | 6063 | 0.110486 | ATGCCACCCCGCTTATTAGG | 59.890 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4806 | 6141 | 1.866853 | CGGAGGCTTTGGGTTGCTTC | 61.867 | 60.000 | 0.00 | 0.00 | 35.05 | 3.86 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.