Multiple sequence alignment - TraesCS6A01G275000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G275000 chr6A 100.000 4518 0 0 1 4518 501797657 501793140 0.000000e+00 8344.0
1 TraesCS6A01G275000 chr6A 76.129 310 59 13 88 388 91917797 91918100 1.010000e-31 148.0
2 TraesCS6A01G275000 chr6A 75.291 344 67 13 385 722 362701161 362700830 1.010000e-31 148.0
3 TraesCS6A01G275000 chr6A 81.752 137 12 11 569 705 570472786 570472663 8.000000e-18 102.0
4 TraesCS6A01G275000 chr6A 76.389 144 18 10 563 705 140603318 140603446 3.770000e-06 63.9
5 TraesCS6A01G275000 chr6B 95.056 3742 126 32 797 4518 542228635 542224933 0.000000e+00 5830.0
6 TraesCS6A01G275000 chr6D 92.440 2897 147 32 1639 4518 360685033 360682192 0.000000e+00 4071.0
7 TraesCS6A01G275000 chr6D 89.776 802 41 8 810 1602 360685940 360685171 0.000000e+00 989.0
8 TraesCS6A01G275000 chr5D 80.679 471 49 24 4068 4518 458778518 458778070 1.210000e-85 327.0
9 TraesCS6A01G275000 chr5D 85.526 228 25 8 3703 3928 458778834 458778613 9.770000e-57 231.0
10 TraesCS6A01G275000 chr5D 75.342 219 25 14 385 575 367816147 367815930 1.350000e-10 78.7
11 TraesCS6A01G275000 chr5A 78.738 301 58 6 92 388 600239413 600239711 3.570000e-46 196.0
12 TraesCS6A01G275000 chr1D 77.260 365 56 12 14 363 436860060 436860412 5.970000e-44 189.0
13 TraesCS6A01G275000 chr1D 78.906 128 20 6 385 510 375218590 375218468 3.750000e-11 80.5
14 TraesCS6A01G275000 chr7D 75.718 383 76 9 14 388 381345731 381346104 4.650000e-40 176.0
15 TraesCS6A01G275000 chr7D 81.818 132 21 2 385 513 588258020 588258151 1.720000e-19 108.0
16 TraesCS6A01G275000 chr5B 80.000 245 27 11 4068 4312 562456474 562456252 1.300000e-35 161.0
17 TraesCS6A01G275000 chr5B 87.603 121 14 1 4398 4518 562454687 562454568 6.090000e-29 139.0
18 TraesCS6A01G275000 chr2A 81.061 132 22 2 385 513 182895689 182895558 8.000000e-18 102.0
19 TraesCS6A01G275000 chr2A 81.897 116 16 4 386 497 14432502 14432388 4.810000e-15 93.5
20 TraesCS6A01G275000 chr2A 78.195 133 25 2 573 705 693899700 693899572 1.040000e-11 82.4
21 TraesCS6A01G275000 chr7B 75.229 218 50 2 15 232 639510979 639510766 2.880000e-17 100.0
22 TraesCS6A01G275000 chr7B 74.269 171 30 11 569 738 367490817 367490974 4.880000e-05 60.2
23 TraesCS6A01G275000 chr3A 81.513 119 22 0 385 503 349156451 349156569 1.030000e-16 99.0
24 TraesCS6A01G275000 chr1B 76.804 194 32 6 387 576 305301675 305301491 3.720000e-16 97.1
25 TraesCS6A01G275000 chr1B 80.000 125 23 2 385 508 434832443 434832320 1.730000e-14 91.6
26 TraesCS6A01G275000 chr4D 80.165 121 19 4 385 501 342830652 342830533 8.050000e-13 86.1
27 TraesCS6A01G275000 chr7A 100.000 30 0 0 676 705 449448583 449448612 6.310000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G275000 chr6A 501793140 501797657 4517 True 8344 8344 100.0000 1 4518 1 chr6A.!!$R2 4517
1 TraesCS6A01G275000 chr6B 542224933 542228635 3702 True 5830 5830 95.0560 797 4518 1 chr6B.!!$R1 3721
2 TraesCS6A01G275000 chr6D 360682192 360685940 3748 True 2530 4071 91.1080 810 4518 2 chr6D.!!$R1 3708
3 TraesCS6A01G275000 chr5D 458778070 458778834 764 True 279 327 83.1025 3703 4518 2 chr5D.!!$R2 815

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.030773 GATCTACGGCTGATGTCGCA 59.969 55.000 0.00 0.00 46.43 5.10 F
91 92 0.031314 ATCTACGGCTGATGTCGCAG 59.969 55.000 0.00 0.00 46.43 5.18 F
240 241 0.031585 TTCACTCCGTCACTTGTCGG 59.968 55.000 8.41 8.41 45.66 4.79 F
610 611 0.036448 TTCGTTTTGGTATGGCCGGA 59.964 50.000 5.05 0.00 41.21 5.14 F
797 798 0.108774 GTGTAGATGCTTAGGGGGCC 59.891 60.000 0.00 0.00 0.00 5.80 F
798 799 0.327095 TGTAGATGCTTAGGGGGCCA 60.327 55.000 4.39 0.00 0.00 5.36 F
799 800 0.843984 GTAGATGCTTAGGGGGCCAA 59.156 55.000 4.39 0.00 0.00 4.52 F
1271 1285 1.153208 TCCGACGCCTAGACTCTCC 60.153 63.158 0.00 0.00 0.00 3.71 F
1401 1415 1.304134 TCCTGTGGCGTCTCAGCTA 60.304 57.895 13.45 1.22 37.29 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1632 1646 0.601057 AATGCCCAAAGTACAACGCC 59.399 50.000 0.0 0.0 0.00 5.68 R
1644 1658 1.894466 CATGTCCTTTGTGAATGCCCA 59.106 47.619 0.0 0.0 0.00 5.36 R
1888 2019 4.040584 GGATCAGGGTAGACATAAGGGAAC 59.959 50.000 0.0 0.0 0.00 3.62 R
2299 2431 3.498777 GTCTTGGGACTACAGCAAAGAAC 59.501 47.826 0.0 0.0 39.24 3.01 R
2769 2906 1.066430 CACGAAGCCCAGCTAAACCTA 60.066 52.381 0.0 0.0 38.25 3.08 R
3000 3138 3.549299 AGCAGATTTTTCACGCTCTTG 57.451 42.857 0.0 0.0 0.00 3.02 R
3257 3395 8.470002 TGATCTCGAATACAGATAACCCATATG 58.530 37.037 0.0 0.0 30.30 1.78 R
3412 3551 0.242825 CCTTCTTGTCGTAGTGGCGA 59.757 55.000 0.0 0.0 38.68 5.54 R
3711 3851 2.289444 TGGTTTGGACTACAGCACTAGC 60.289 50.000 0.0 0.0 42.56 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.472702 GACGCTTCGTAGTGGTCC 57.527 61.111 7.54 0.00 41.37 4.46
18 19 1.881602 GACGCTTCGTAGTGGTCCT 59.118 57.895 7.54 0.00 41.37 3.85
19 20 0.243095 GACGCTTCGTAGTGGTCCTT 59.757 55.000 7.54 0.00 41.37 3.36
20 21 1.470098 GACGCTTCGTAGTGGTCCTTA 59.530 52.381 7.54 0.00 41.37 2.69
21 22 1.888512 ACGCTTCGTAGTGGTCCTTAA 59.111 47.619 7.54 0.00 38.73 1.85
22 23 2.257034 CGCTTCGTAGTGGTCCTTAAC 58.743 52.381 0.00 0.00 0.00 2.01
23 24 5.468395 ACGCTTCGTAGTGGTCCTTAACC 62.468 52.174 7.54 0.00 43.20 2.85
33 34 2.502142 GTCCTTAACCACCCGGAATT 57.498 50.000 0.73 0.00 35.59 2.17
34 35 2.089201 GTCCTTAACCACCCGGAATTG 58.911 52.381 0.73 0.00 35.59 2.32
35 36 1.706305 TCCTTAACCACCCGGAATTGT 59.294 47.619 0.73 0.00 35.59 2.71
36 37 1.816224 CCTTAACCACCCGGAATTGTG 59.184 52.381 0.73 1.47 35.59 3.33
37 38 1.201414 CTTAACCACCCGGAATTGTGC 59.799 52.381 0.73 0.00 35.59 4.57
38 39 0.609681 TAACCACCCGGAATTGTGCC 60.610 55.000 0.73 0.00 35.59 5.01
39 40 2.035626 CCACCCGGAATTGTGCCT 59.964 61.111 0.73 0.00 0.00 4.75
40 41 2.046285 CCACCCGGAATTGTGCCTC 61.046 63.158 0.73 0.00 0.00 4.70
41 42 1.002134 CACCCGGAATTGTGCCTCT 60.002 57.895 0.73 0.00 0.00 3.69
42 43 1.026718 CACCCGGAATTGTGCCTCTC 61.027 60.000 0.73 0.00 0.00 3.20
43 44 1.201429 ACCCGGAATTGTGCCTCTCT 61.201 55.000 0.73 0.00 0.00 3.10
44 45 0.462759 CCCGGAATTGTGCCTCTCTC 60.463 60.000 0.73 0.00 0.00 3.20
45 46 0.807667 CCGGAATTGTGCCTCTCTCG 60.808 60.000 0.00 0.00 0.00 4.04
46 47 1.424493 CGGAATTGTGCCTCTCTCGC 61.424 60.000 0.00 0.00 0.00 5.03
47 48 1.092345 GGAATTGTGCCTCTCTCGCC 61.092 60.000 0.00 0.00 0.00 5.54
48 49 1.078143 AATTGTGCCTCTCTCGCCC 60.078 57.895 0.00 0.00 0.00 6.13
49 50 2.543067 AATTGTGCCTCTCTCGCCCC 62.543 60.000 0.00 0.00 0.00 5.80
69 70 4.167483 GCGCGGTGCAAAATTGAT 57.833 50.000 8.83 0.00 45.45 2.57
70 71 3.320884 GCGCGGTGCAAAATTGATA 57.679 47.368 8.83 0.00 45.45 2.15
71 72 1.191096 GCGCGGTGCAAAATTGATAG 58.809 50.000 8.83 0.00 45.45 2.08
72 73 1.202132 GCGCGGTGCAAAATTGATAGA 60.202 47.619 8.83 0.00 45.45 1.98
73 74 2.541588 GCGCGGTGCAAAATTGATAGAT 60.542 45.455 8.83 0.00 45.45 1.98
74 75 3.291585 CGCGGTGCAAAATTGATAGATC 58.708 45.455 0.00 0.00 0.00 2.75
75 76 3.002656 CGCGGTGCAAAATTGATAGATCT 59.997 43.478 0.00 0.00 0.00 2.75
76 77 4.211164 CGCGGTGCAAAATTGATAGATCTA 59.789 41.667 4.57 4.57 0.00 1.98
77 78 5.444122 GCGGTGCAAAATTGATAGATCTAC 58.556 41.667 4.10 0.16 0.00 2.59
78 79 5.670097 CGGTGCAAAATTGATAGATCTACG 58.330 41.667 4.10 0.00 0.00 3.51
79 80 5.333339 CGGTGCAAAATTGATAGATCTACGG 60.333 44.000 4.10 0.00 0.00 4.02
80 81 5.444122 GTGCAAAATTGATAGATCTACGGC 58.556 41.667 4.10 0.00 0.00 5.68
81 82 5.237344 GTGCAAAATTGATAGATCTACGGCT 59.763 40.000 4.10 0.00 0.00 5.52
82 83 5.237127 TGCAAAATTGATAGATCTACGGCTG 59.763 40.000 4.10 0.00 0.00 4.85
83 84 5.466728 GCAAAATTGATAGATCTACGGCTGA 59.533 40.000 4.10 0.00 0.00 4.26
84 85 6.148480 GCAAAATTGATAGATCTACGGCTGAT 59.852 38.462 4.10 0.00 0.00 2.90
85 86 7.516481 CAAAATTGATAGATCTACGGCTGATG 58.484 38.462 4.10 0.00 0.00 3.07
86 87 5.991933 ATTGATAGATCTACGGCTGATGT 57.008 39.130 4.10 0.00 0.00 3.06
87 88 5.378292 TTGATAGATCTACGGCTGATGTC 57.622 43.478 4.10 0.00 0.00 3.06
89 90 0.312416 AGATCTACGGCTGATGTCGC 59.688 55.000 0.00 0.00 46.43 5.19
90 91 0.030773 GATCTACGGCTGATGTCGCA 59.969 55.000 0.00 0.00 46.43 5.10
91 92 0.031314 ATCTACGGCTGATGTCGCAG 59.969 55.000 0.00 0.00 46.43 5.18
97 98 2.107750 CTGATGTCGCAGCCGGAT 59.892 61.111 5.05 0.00 34.56 4.18
98 99 1.522355 CTGATGTCGCAGCCGGATT 60.522 57.895 5.05 0.00 34.56 3.01
99 100 1.078497 TGATGTCGCAGCCGGATTT 60.078 52.632 5.05 0.00 34.56 2.17
100 101 1.353103 GATGTCGCAGCCGGATTTG 59.647 57.895 5.05 0.18 34.56 2.32
101 102 1.078497 ATGTCGCAGCCGGATTTGA 60.078 52.632 5.05 0.00 34.56 2.69
102 103 1.369091 ATGTCGCAGCCGGATTTGAC 61.369 55.000 5.05 10.21 34.56 3.18
103 104 2.813474 TCGCAGCCGGATTTGACG 60.813 61.111 5.05 8.38 34.56 4.35
104 105 4.520846 CGCAGCCGGATTTGACGC 62.521 66.667 5.05 0.00 0.00 5.19
105 106 3.430862 GCAGCCGGATTTGACGCA 61.431 61.111 5.05 0.00 0.00 5.24
106 107 2.480555 CAGCCGGATTTGACGCAC 59.519 61.111 5.05 0.00 0.00 5.34
107 108 2.746277 AGCCGGATTTGACGCACC 60.746 61.111 5.05 0.00 0.00 5.01
108 109 3.810896 GCCGGATTTGACGCACCC 61.811 66.667 5.05 0.00 0.00 4.61
109 110 3.496131 CCGGATTTGACGCACCCG 61.496 66.667 0.00 0.00 39.85 5.28
110 111 3.496131 CGGATTTGACGCACCCGG 61.496 66.667 0.00 0.00 39.22 5.73
111 112 3.810896 GGATTTGACGCACCCGGC 61.811 66.667 0.00 0.00 44.72 6.13
129 130 3.747976 GGCCGGCAATTGCGTCTT 61.748 61.111 30.85 0.00 43.26 3.01
130 131 2.258286 GCCGGCAATTGCGTCTTT 59.742 55.556 24.80 0.00 43.26 2.52
131 132 2.088178 GCCGGCAATTGCGTCTTTG 61.088 57.895 24.80 9.25 43.26 2.77
132 133 1.285641 CCGGCAATTGCGTCTTTGT 59.714 52.632 23.48 0.00 43.26 2.83
133 134 0.729140 CCGGCAATTGCGTCTTTGTC 60.729 55.000 23.48 6.66 43.26 3.18
134 135 0.040514 CGGCAATTGCGTCTTTGTCA 60.041 50.000 23.48 0.00 43.26 3.58
135 136 1.401409 CGGCAATTGCGTCTTTGTCAT 60.401 47.619 23.48 0.00 43.26 3.06
136 137 1.987770 GGCAATTGCGTCTTTGTCATG 59.012 47.619 23.48 0.00 43.26 3.07
137 138 1.987770 GCAATTGCGTCTTTGTCATGG 59.012 47.619 15.87 0.00 0.00 3.66
138 139 2.351641 GCAATTGCGTCTTTGTCATGGA 60.352 45.455 15.87 0.00 0.00 3.41
139 140 3.674138 GCAATTGCGTCTTTGTCATGGAT 60.674 43.478 15.87 0.00 0.00 3.41
140 141 4.487948 CAATTGCGTCTTTGTCATGGATT 58.512 39.130 0.00 0.00 0.00 3.01
141 142 3.557577 TTGCGTCTTTGTCATGGATTG 57.442 42.857 0.00 0.00 0.00 2.67
142 143 1.811965 TGCGTCTTTGTCATGGATTGG 59.188 47.619 0.00 0.00 0.00 3.16
143 144 1.468054 GCGTCTTTGTCATGGATTGGC 60.468 52.381 0.00 0.00 0.00 4.52
144 145 1.133025 CGTCTTTGTCATGGATTGGCC 59.867 52.381 0.00 0.00 37.10 5.36
145 146 1.133025 GTCTTTGTCATGGATTGGCCG 59.867 52.381 0.00 0.00 40.66 6.13
146 147 0.457035 CTTTGTCATGGATTGGCCGG 59.543 55.000 0.00 0.00 40.66 6.13
147 148 0.969917 TTTGTCATGGATTGGCCGGG 60.970 55.000 2.18 0.00 40.66 5.73
148 149 2.148723 TTGTCATGGATTGGCCGGGT 62.149 55.000 2.18 0.00 40.66 5.28
149 150 2.120909 GTCATGGATTGGCCGGGTG 61.121 63.158 2.18 0.00 40.66 4.61
150 151 3.530260 CATGGATTGGCCGGGTGC 61.530 66.667 2.18 0.00 40.66 5.01
162 163 3.642755 GGGTGCCGAATCGCATAG 58.357 61.111 0.00 0.00 41.70 2.23
163 164 2.607892 GGGTGCCGAATCGCATAGC 61.608 63.158 0.00 0.00 41.70 2.97
164 165 2.607892 GGTGCCGAATCGCATAGCC 61.608 63.158 0.00 0.00 41.70 3.93
165 166 2.280797 TGCCGAATCGCATAGCCC 60.281 61.111 0.00 0.00 32.62 5.19
166 167 3.050275 GCCGAATCGCATAGCCCC 61.050 66.667 0.00 0.00 0.00 5.80
167 168 2.743718 CCGAATCGCATAGCCCCT 59.256 61.111 0.00 0.00 0.00 4.79
168 169 1.669115 CCGAATCGCATAGCCCCTG 60.669 63.158 0.00 0.00 0.00 4.45
169 170 2.320587 CGAATCGCATAGCCCCTGC 61.321 63.158 0.00 0.00 36.26 4.85
170 171 1.227943 GAATCGCATAGCCCCTGCA 60.228 57.895 3.98 0.00 39.64 4.41
171 172 0.819259 GAATCGCATAGCCCCTGCAA 60.819 55.000 3.98 0.00 39.64 4.08
172 173 0.178981 AATCGCATAGCCCCTGCAAT 60.179 50.000 3.98 0.00 39.64 3.56
173 174 0.892358 ATCGCATAGCCCCTGCAATG 60.892 55.000 3.98 0.00 39.64 2.82
174 175 2.732658 GCATAGCCCCTGCAATGC 59.267 61.111 0.00 0.00 41.13 3.56
175 176 2.864471 GCATAGCCCCTGCAATGCC 61.864 63.158 1.53 0.00 41.13 4.40
176 177 1.152610 CATAGCCCCTGCAATGCCT 60.153 57.895 1.53 0.00 41.13 4.75
177 178 1.152368 ATAGCCCCTGCAATGCCTC 59.848 57.895 1.53 0.00 41.13 4.70
178 179 1.358830 ATAGCCCCTGCAATGCCTCT 61.359 55.000 1.53 0.00 41.13 3.69
179 180 2.274948 TAGCCCCTGCAATGCCTCTG 62.275 60.000 1.53 0.00 41.13 3.35
180 181 3.145551 CCCCTGCAATGCCTCTGC 61.146 66.667 1.53 0.00 40.35 4.26
181 182 3.515286 CCCTGCAATGCCTCTGCG 61.515 66.667 1.53 0.00 42.97 5.18
182 183 4.189188 CCTGCAATGCCTCTGCGC 62.189 66.667 1.53 0.00 42.97 6.09
183 184 4.189188 CTGCAATGCCTCTGCGCC 62.189 66.667 4.18 0.00 42.97 6.53
195 196 4.854924 TGCGCCGCATGCAGGTAT 62.855 61.111 19.57 0.00 41.33 2.73
196 197 4.318021 GCGCCGCATGCAGGTATG 62.318 66.667 19.57 13.83 41.33 2.39
197 198 3.653009 CGCCGCATGCAGGTATGG 61.653 66.667 19.57 10.61 41.33 2.74
198 199 3.969802 GCCGCATGCAGGTATGGC 61.970 66.667 19.57 16.96 40.77 4.40
199 200 3.289834 CCGCATGCAGGTATGGCC 61.290 66.667 19.57 0.00 37.58 5.36
201 202 2.256591 CGCATGCAGGTATGGCCTC 61.257 63.158 19.57 0.00 46.96 4.70
202 203 1.900498 GCATGCAGGTATGGCCTCC 60.900 63.158 14.21 4.01 46.96 4.30
203 204 1.842007 CATGCAGGTATGGCCTCCT 59.158 57.895 3.32 6.59 46.96 3.69
204 205 0.250640 CATGCAGGTATGGCCTCCTC 60.251 60.000 3.32 4.84 46.96 3.71
205 206 1.422161 ATGCAGGTATGGCCTCCTCC 61.422 60.000 3.32 0.00 46.96 4.30
206 207 1.768077 GCAGGTATGGCCTCCTCCT 60.768 63.158 3.32 3.80 46.96 3.69
207 208 1.763546 GCAGGTATGGCCTCCTCCTC 61.764 65.000 3.32 0.00 46.96 3.71
208 209 0.105246 CAGGTATGGCCTCCTCCTCT 60.105 60.000 3.32 0.00 46.96 3.69
209 210 1.148027 CAGGTATGGCCTCCTCCTCTA 59.852 57.143 3.32 0.00 46.96 2.43
210 211 1.866943 AGGTATGGCCTCCTCCTCTAA 59.133 52.381 3.32 0.00 46.96 2.10
211 212 2.456733 AGGTATGGCCTCCTCCTCTAAT 59.543 50.000 3.32 0.00 46.96 1.73
212 213 2.835156 GGTATGGCCTCCTCCTCTAATC 59.165 54.545 3.32 0.00 0.00 1.75
213 214 1.638529 ATGGCCTCCTCCTCTAATCG 58.361 55.000 3.32 0.00 0.00 3.34
214 215 1.115930 TGGCCTCCTCCTCTAATCGC 61.116 60.000 3.32 0.00 0.00 4.58
215 216 0.830023 GGCCTCCTCCTCTAATCGCT 60.830 60.000 0.00 0.00 0.00 4.93
216 217 1.044611 GCCTCCTCCTCTAATCGCTT 58.955 55.000 0.00 0.00 0.00 4.68
217 218 1.270041 GCCTCCTCCTCTAATCGCTTG 60.270 57.143 0.00 0.00 0.00 4.01
218 219 1.342819 CCTCCTCCTCTAATCGCTTGG 59.657 57.143 0.00 0.00 0.00 3.61
219 220 2.311463 CTCCTCCTCTAATCGCTTGGA 58.689 52.381 0.00 0.00 0.00 3.53
220 221 2.896685 CTCCTCCTCTAATCGCTTGGAT 59.103 50.000 0.00 0.00 36.78 3.41
221 222 3.309296 TCCTCCTCTAATCGCTTGGATT 58.691 45.455 0.00 0.00 46.86 3.01
222 223 3.711704 TCCTCCTCTAATCGCTTGGATTT 59.288 43.478 0.00 0.00 42.77 2.17
223 224 4.061596 CCTCCTCTAATCGCTTGGATTTC 58.938 47.826 0.00 0.00 42.77 2.17
224 225 4.443457 CCTCCTCTAATCGCTTGGATTTCA 60.443 45.833 0.00 0.00 42.77 2.69
225 226 4.442706 TCCTCTAATCGCTTGGATTTCAC 58.557 43.478 0.00 0.00 42.77 3.18
226 227 4.162320 TCCTCTAATCGCTTGGATTTCACT 59.838 41.667 0.00 0.00 42.77 3.41
227 228 4.509600 CCTCTAATCGCTTGGATTTCACTC 59.490 45.833 0.00 0.00 42.77 3.51
228 229 4.442706 TCTAATCGCTTGGATTTCACTCC 58.557 43.478 0.00 0.00 42.77 3.85
229 230 1.656652 ATCGCTTGGATTTCACTCCG 58.343 50.000 0.00 0.00 38.21 4.63
230 231 0.320374 TCGCTTGGATTTCACTCCGT 59.680 50.000 0.00 0.00 38.21 4.69
231 232 0.721718 CGCTTGGATTTCACTCCGTC 59.278 55.000 0.00 0.00 38.21 4.79
232 233 1.808411 GCTTGGATTTCACTCCGTCA 58.192 50.000 0.00 0.00 38.21 4.35
233 234 1.464997 GCTTGGATTTCACTCCGTCAC 59.535 52.381 0.00 0.00 38.21 3.67
234 235 2.872038 GCTTGGATTTCACTCCGTCACT 60.872 50.000 0.00 0.00 38.21 3.41
235 236 3.403038 CTTGGATTTCACTCCGTCACTT 58.597 45.455 0.00 0.00 38.21 3.16
236 237 2.766313 TGGATTTCACTCCGTCACTTG 58.234 47.619 0.00 0.00 38.21 3.16
237 238 2.104111 TGGATTTCACTCCGTCACTTGT 59.896 45.455 0.00 0.00 38.21 3.16
238 239 2.737252 GGATTTCACTCCGTCACTTGTC 59.263 50.000 0.00 0.00 0.00 3.18
239 240 1.847818 TTTCACTCCGTCACTTGTCG 58.152 50.000 0.00 0.00 0.00 4.35
240 241 0.031585 TTCACTCCGTCACTTGTCGG 59.968 55.000 8.41 8.41 45.66 4.79
241 242 2.022129 CACTCCGTCACTTGTCGGC 61.022 63.158 9.68 0.00 44.33 5.54
242 243 2.805353 CTCCGTCACTTGTCGGCG 60.805 66.667 9.68 0.00 44.33 6.46
243 244 4.351938 TCCGTCACTTGTCGGCGG 62.352 66.667 7.21 7.45 44.33 6.13
244 245 4.657824 CCGTCACTTGTCGGCGGT 62.658 66.667 7.21 0.00 39.56 5.68
245 246 2.660552 CGTCACTTGTCGGCGGTT 60.661 61.111 7.21 0.00 0.00 4.44
246 247 2.654912 CGTCACTTGTCGGCGGTTC 61.655 63.158 7.21 0.00 0.00 3.62
247 248 1.593209 GTCACTTGTCGGCGGTTCA 60.593 57.895 7.21 1.28 0.00 3.18
248 249 0.949105 GTCACTTGTCGGCGGTTCAT 60.949 55.000 7.21 0.00 0.00 2.57
249 250 0.669318 TCACTTGTCGGCGGTTCATC 60.669 55.000 7.21 0.00 0.00 2.92
250 251 0.948623 CACTTGTCGGCGGTTCATCA 60.949 55.000 7.21 0.00 0.00 3.07
251 252 0.250124 ACTTGTCGGCGGTTCATCAA 60.250 50.000 7.21 3.10 0.00 2.57
252 253 0.165944 CTTGTCGGCGGTTCATCAAC 59.834 55.000 7.21 0.00 0.00 3.18
253 254 0.533085 TTGTCGGCGGTTCATCAACA 60.533 50.000 7.21 0.00 33.70 3.33
254 255 0.533085 TGTCGGCGGTTCATCAACAA 60.533 50.000 7.21 0.00 33.70 2.83
255 256 0.589223 GTCGGCGGTTCATCAACAAA 59.411 50.000 7.21 0.00 33.70 2.83
256 257 0.871722 TCGGCGGTTCATCAACAAAG 59.128 50.000 7.21 0.00 33.70 2.77
257 258 0.871722 CGGCGGTTCATCAACAAAGA 59.128 50.000 0.00 0.00 33.70 2.52
258 259 1.399727 CGGCGGTTCATCAACAAAGAC 60.400 52.381 0.00 0.00 33.70 3.01
259 260 1.606668 GGCGGTTCATCAACAAAGACA 59.393 47.619 0.00 0.00 33.70 3.41
260 261 2.228822 GGCGGTTCATCAACAAAGACAT 59.771 45.455 0.00 0.00 33.70 3.06
261 262 3.236816 GCGGTTCATCAACAAAGACATG 58.763 45.455 0.00 0.00 33.70 3.21
262 263 3.058293 GCGGTTCATCAACAAAGACATGA 60.058 43.478 0.00 0.00 33.70 3.07
263 264 4.466828 CGGTTCATCAACAAAGACATGAC 58.533 43.478 0.00 0.00 33.70 3.06
264 265 4.613622 CGGTTCATCAACAAAGACATGACC 60.614 45.833 0.00 0.00 33.70 4.02
265 266 4.466828 GTTCATCAACAAAGACATGACCG 58.533 43.478 0.00 0.00 32.14 4.79
266 267 3.073678 TCATCAACAAAGACATGACCGG 58.926 45.455 0.00 0.00 0.00 5.28
267 268 2.631160 TCAACAAAGACATGACCGGT 57.369 45.000 6.92 6.92 0.00 5.28
268 269 2.489971 TCAACAAAGACATGACCGGTC 58.510 47.619 28.17 28.17 35.50 4.79
270 271 2.457366 ACAAAGACATGACCGGTCTC 57.543 50.000 33.39 22.96 44.50 3.36
271 272 1.336887 ACAAAGACATGACCGGTCTCG 60.337 52.381 33.39 25.42 44.50 4.04
311 312 4.329545 GCTCCCCGTTGCTGGTCA 62.330 66.667 0.00 0.00 0.00 4.02
312 313 2.671070 CTCCCCGTTGCTGGTCAT 59.329 61.111 0.00 0.00 0.00 3.06
313 314 1.904771 CTCCCCGTTGCTGGTCATA 59.095 57.895 0.00 0.00 0.00 2.15
314 315 0.251916 CTCCCCGTTGCTGGTCATAA 59.748 55.000 0.00 0.00 0.00 1.90
315 316 0.693622 TCCCCGTTGCTGGTCATAAA 59.306 50.000 0.00 0.00 0.00 1.40
316 317 1.094785 CCCCGTTGCTGGTCATAAAG 58.905 55.000 0.00 0.00 0.00 1.85
317 318 1.613255 CCCCGTTGCTGGTCATAAAGT 60.613 52.381 0.00 0.00 0.00 2.66
318 319 1.468520 CCCGTTGCTGGTCATAAAGTG 59.531 52.381 0.00 0.00 0.00 3.16
319 320 1.135689 CCGTTGCTGGTCATAAAGTGC 60.136 52.381 0.00 0.00 0.00 4.40
320 321 1.135689 CGTTGCTGGTCATAAAGTGCC 60.136 52.381 0.00 0.00 0.00 5.01
321 322 1.885887 GTTGCTGGTCATAAAGTGCCA 59.114 47.619 0.00 0.00 34.36 4.92
322 323 2.493278 GTTGCTGGTCATAAAGTGCCAT 59.507 45.455 0.00 0.00 34.81 4.40
323 324 2.093890 TGCTGGTCATAAAGTGCCATG 58.906 47.619 0.00 0.00 34.81 3.66
324 325 2.290832 TGCTGGTCATAAAGTGCCATGA 60.291 45.455 0.00 0.00 34.81 3.07
325 326 2.098117 GCTGGTCATAAAGTGCCATGAC 59.902 50.000 6.22 6.22 46.73 3.06
326 327 3.614092 CTGGTCATAAAGTGCCATGACT 58.386 45.455 12.84 0.00 46.67 3.41
327 328 3.346315 TGGTCATAAAGTGCCATGACTG 58.654 45.455 12.84 0.00 46.67 3.51
328 329 2.098117 GGTCATAAAGTGCCATGACTGC 59.902 50.000 12.84 0.00 46.67 4.40
329 330 2.098117 GTCATAAAGTGCCATGACTGCC 59.902 50.000 7.31 0.00 44.94 4.85
330 331 1.406539 CATAAAGTGCCATGACTGCCC 59.593 52.381 0.00 0.00 0.00 5.36
331 332 0.676466 TAAAGTGCCATGACTGCCCG 60.676 55.000 0.00 0.00 0.00 6.13
332 333 2.697147 AAAGTGCCATGACTGCCCGT 62.697 55.000 0.00 0.00 0.00 5.28
333 334 3.434319 GTGCCATGACTGCCCGTG 61.434 66.667 0.00 0.00 0.00 4.94
334 335 4.720902 TGCCATGACTGCCCGTGG 62.721 66.667 0.00 0.00 44.18 4.94
335 336 4.722700 GCCATGACTGCCCGTGGT 62.723 66.667 0.00 0.00 43.46 4.16
336 337 2.986290 CCATGACTGCCCGTGGTA 59.014 61.111 0.00 0.00 38.19 3.25
337 338 1.153369 CCATGACTGCCCGTGGTAG 60.153 63.158 0.00 6.51 41.23 3.18
338 339 1.153369 CATGACTGCCCGTGGTAGG 60.153 63.158 11.51 0.00 39.75 3.18
339 340 1.612442 ATGACTGCCCGTGGTAGGT 60.612 57.895 11.51 0.00 39.75 3.08
340 341 0.324923 ATGACTGCCCGTGGTAGGTA 60.325 55.000 11.51 2.36 39.75 3.08
341 342 0.968901 TGACTGCCCGTGGTAGGTAG 60.969 60.000 11.51 2.72 39.75 3.18
342 343 1.077985 ACTGCCCGTGGTAGGTAGT 59.922 57.895 11.51 3.29 44.46 2.73
343 344 1.515954 CTGCCCGTGGTAGGTAGTG 59.484 63.158 1.01 0.00 32.87 2.74
344 345 2.186125 GCCCGTGGTAGGTAGTGC 59.814 66.667 0.00 0.00 0.00 4.40
345 346 2.493030 CCCGTGGTAGGTAGTGCG 59.507 66.667 0.00 0.00 0.00 5.34
346 347 2.202703 CCGTGGTAGGTAGTGCGC 60.203 66.667 0.00 0.00 0.00 6.09
347 348 2.202703 CGTGGTAGGTAGTGCGCC 60.203 66.667 4.18 0.00 0.00 6.53
348 349 2.202703 GTGGTAGGTAGTGCGCCG 60.203 66.667 4.18 0.00 0.00 6.46
349 350 2.361483 TGGTAGGTAGTGCGCCGA 60.361 61.111 4.18 0.00 0.00 5.54
350 351 2.412112 GGTAGGTAGTGCGCCGAG 59.588 66.667 4.18 0.00 0.00 4.63
351 352 2.413142 GGTAGGTAGTGCGCCGAGT 61.413 63.158 4.18 0.00 0.00 4.18
352 353 1.509923 GTAGGTAGTGCGCCGAGTT 59.490 57.895 4.18 0.00 0.00 3.01
353 354 0.108945 GTAGGTAGTGCGCCGAGTTT 60.109 55.000 4.18 0.00 0.00 2.66
354 355 0.171903 TAGGTAGTGCGCCGAGTTTC 59.828 55.000 4.18 0.00 0.00 2.78
355 356 1.373748 GGTAGTGCGCCGAGTTTCA 60.374 57.895 4.18 0.00 0.00 2.69
356 357 0.947180 GGTAGTGCGCCGAGTTTCAA 60.947 55.000 4.18 0.00 0.00 2.69
357 358 0.163146 GTAGTGCGCCGAGTTTCAAC 59.837 55.000 4.18 0.00 0.00 3.18
358 359 0.947180 TAGTGCGCCGAGTTTCAACC 60.947 55.000 4.18 0.00 0.00 3.77
359 360 2.203084 TGCGCCGAGTTTCAACCA 60.203 55.556 4.18 0.00 0.00 3.67
360 361 2.251371 GCGCCGAGTTTCAACCAC 59.749 61.111 0.00 0.00 0.00 4.16
361 362 2.549282 CGCCGAGTTTCAACCACG 59.451 61.111 0.00 0.00 0.00 4.94
362 363 2.251371 GCCGAGTTTCAACCACGC 59.749 61.111 0.00 0.00 0.00 5.34
363 364 2.943653 CCGAGTTTCAACCACGCC 59.056 61.111 0.00 0.00 0.00 5.68
364 365 2.549282 CGAGTTTCAACCACGCCG 59.451 61.111 0.00 0.00 0.00 6.46
365 366 1.952133 CGAGTTTCAACCACGCCGA 60.952 57.895 0.00 0.00 0.00 5.54
366 367 1.492319 CGAGTTTCAACCACGCCGAA 61.492 55.000 0.00 0.00 0.00 4.30
367 368 0.658897 GAGTTTCAACCACGCCGAAA 59.341 50.000 0.00 0.00 0.00 3.46
368 369 0.379316 AGTTTCAACCACGCCGAAAC 59.621 50.000 6.20 6.20 45.64 2.78
369 370 0.099082 GTTTCAACCACGCCGAAACA 59.901 50.000 8.86 0.00 44.98 2.83
370 371 0.099082 TTTCAACCACGCCGAAACAC 59.901 50.000 0.00 0.00 0.00 3.32
371 372 1.716826 TTCAACCACGCCGAAACACC 61.717 55.000 0.00 0.00 0.00 4.16
372 373 2.903350 AACCACGCCGAAACACCC 60.903 61.111 0.00 0.00 0.00 4.61
373 374 4.941309 ACCACGCCGAAACACCCC 62.941 66.667 0.00 0.00 0.00 4.95
376 377 3.614698 ACGCCGAAACACCCCGTA 61.615 61.111 0.00 0.00 0.00 4.02
377 378 2.125431 CGCCGAAACACCCCGTAT 60.125 61.111 0.00 0.00 0.00 3.06
378 379 1.742510 CGCCGAAACACCCCGTATT 60.743 57.895 0.00 0.00 0.00 1.89
379 380 1.798087 GCCGAAACACCCCGTATTG 59.202 57.895 0.00 0.00 0.00 1.90
380 381 1.650314 GCCGAAACACCCCGTATTGG 61.650 60.000 0.00 0.00 37.55 3.16
381 382 0.321830 CCGAAACACCCCGTATTGGT 60.322 55.000 0.00 0.00 36.21 3.67
386 387 3.948735 CACCCCGTATTGGTGTTCT 57.051 52.632 1.27 0.00 46.62 3.01
387 388 2.194201 CACCCCGTATTGGTGTTCTT 57.806 50.000 1.27 0.00 46.62 2.52
388 389 1.810151 CACCCCGTATTGGTGTTCTTG 59.190 52.381 1.27 0.00 46.62 3.02
389 390 1.271707 ACCCCGTATTGGTGTTCTTGG 60.272 52.381 0.00 0.00 33.94 3.61
390 391 1.003812 CCCCGTATTGGTGTTCTTGGA 59.996 52.381 0.00 0.00 35.15 3.53
391 392 2.356741 CCCCGTATTGGTGTTCTTGGAT 60.357 50.000 0.00 0.00 35.15 3.41
392 393 2.682856 CCCGTATTGGTGTTCTTGGATG 59.317 50.000 0.00 0.00 35.15 3.51
393 394 3.605634 CCGTATTGGTGTTCTTGGATGA 58.394 45.455 0.00 0.00 0.00 2.92
394 395 3.623060 CCGTATTGGTGTTCTTGGATGAG 59.377 47.826 0.00 0.00 0.00 2.90
395 396 3.063997 CGTATTGGTGTTCTTGGATGAGC 59.936 47.826 0.00 0.00 0.00 4.26
396 397 2.655090 TTGGTGTTCTTGGATGAGCA 57.345 45.000 0.00 0.00 0.00 4.26
397 398 2.885135 TGGTGTTCTTGGATGAGCAT 57.115 45.000 0.00 0.00 30.43 3.79
398 399 2.439409 TGGTGTTCTTGGATGAGCATG 58.561 47.619 0.00 0.00 30.43 4.06
399 400 1.133790 GGTGTTCTTGGATGAGCATGC 59.866 52.381 10.51 10.51 30.43 4.06
400 401 1.814394 GTGTTCTTGGATGAGCATGCA 59.186 47.619 21.98 0.00 37.37 3.96
401 402 2.229543 GTGTTCTTGGATGAGCATGCAA 59.770 45.455 21.98 15.09 44.92 4.08
402 403 2.892215 TGTTCTTGGATGAGCATGCAAA 59.108 40.909 21.98 7.72 46.03 3.68
403 404 3.057104 TGTTCTTGGATGAGCATGCAAAG 60.057 43.478 21.98 12.61 46.03 2.77
404 405 3.076079 TCTTGGATGAGCATGCAAAGA 57.924 42.857 21.98 14.56 46.03 2.52
405 406 3.423749 TCTTGGATGAGCATGCAAAGAA 58.576 40.909 21.98 3.72 46.03 2.52
406 407 3.442625 TCTTGGATGAGCATGCAAAGAAG 59.557 43.478 21.98 13.13 46.03 2.85
407 408 2.799017 TGGATGAGCATGCAAAGAAGT 58.201 42.857 21.98 0.00 36.19 3.01
408 409 2.490509 TGGATGAGCATGCAAAGAAGTG 59.509 45.455 21.98 0.00 36.19 3.16
409 410 2.159282 GGATGAGCATGCAAAGAAGTGG 60.159 50.000 21.98 0.00 0.00 4.00
410 411 0.599558 TGAGCATGCAAAGAAGTGGC 59.400 50.000 21.98 0.00 0.00 5.01
411 412 0.886563 GAGCATGCAAAGAAGTGGCT 59.113 50.000 21.98 0.00 0.00 4.75
412 413 1.271656 GAGCATGCAAAGAAGTGGCTT 59.728 47.619 21.98 0.00 0.00 4.35
413 414 1.000506 AGCATGCAAAGAAGTGGCTTG 59.999 47.619 21.98 0.00 36.22 4.01
414 415 1.269936 GCATGCAAAGAAGTGGCTTGT 60.270 47.619 14.21 0.00 35.75 3.16
415 416 2.400399 CATGCAAAGAAGTGGCTTGTG 58.600 47.619 0.00 0.00 0.00 3.33
416 417 1.761449 TGCAAAGAAGTGGCTTGTGA 58.239 45.000 0.00 0.00 0.00 3.58
417 418 2.098614 TGCAAAGAAGTGGCTTGTGAA 58.901 42.857 0.00 0.00 0.00 3.18
418 419 2.099592 TGCAAAGAAGTGGCTTGTGAAG 59.900 45.455 0.00 0.00 0.00 3.02
419 420 2.358898 GCAAAGAAGTGGCTTGTGAAGA 59.641 45.455 0.00 0.00 0.00 2.87
420 421 3.181487 GCAAAGAAGTGGCTTGTGAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
421 422 4.677779 GCAAAGAAGTGGCTTGTGAAGAAA 60.678 41.667 0.00 0.00 0.00 2.52
422 423 5.410067 CAAAGAAGTGGCTTGTGAAGAAAA 58.590 37.500 0.00 0.00 0.00 2.29
423 424 5.659440 AAGAAGTGGCTTGTGAAGAAAAA 57.341 34.783 0.00 0.00 0.00 1.94
446 447 6.636562 AAAAGATCATCGACGATAGGTACT 57.363 37.500 10.57 3.59 46.37 2.73
460 461 2.032620 AGGTACTATGAGACGGCAAGG 58.967 52.381 0.00 0.00 36.02 3.61
461 462 1.755380 GGTACTATGAGACGGCAAGGT 59.245 52.381 0.00 0.00 0.00 3.50
462 463 2.223758 GGTACTATGAGACGGCAAGGTC 60.224 54.545 0.00 0.00 37.19 3.85
463 464 0.456221 ACTATGAGACGGCAAGGTCG 59.544 55.000 0.00 0.00 41.81 4.79
464 465 0.249073 CTATGAGACGGCAAGGTCGG 60.249 60.000 0.00 0.00 41.81 4.79
465 466 2.292794 TATGAGACGGCAAGGTCGGC 62.293 60.000 0.00 0.00 39.91 5.54
468 469 2.499685 GACGGCAAGGTCGGCTAT 59.500 61.111 0.00 0.00 34.95 2.97
469 470 1.883084 GACGGCAAGGTCGGCTATG 60.883 63.158 0.00 0.00 34.95 2.23
470 471 2.588877 CGGCAAGGTCGGCTATGG 60.589 66.667 0.00 0.00 0.00 2.74
471 472 2.902343 GGCAAGGTCGGCTATGGC 60.902 66.667 3.73 3.73 37.82 4.40
472 473 2.124736 GCAAGGTCGGCTATGGCA 60.125 61.111 2.58 0.00 40.87 4.92
473 474 2.182842 GCAAGGTCGGCTATGGCAG 61.183 63.158 2.58 0.00 40.87 4.85
484 485 2.486951 CTATGGCAGCAATGAAGCAC 57.513 50.000 0.00 0.00 36.85 4.40
485 486 0.734309 TATGGCAGCAATGAAGCACG 59.266 50.000 0.00 0.00 36.85 5.34
486 487 2.505557 GGCAGCAATGAAGCACGC 60.506 61.111 0.00 0.00 36.85 5.34
487 488 2.872925 GCAGCAATGAAGCACGCG 60.873 61.111 3.53 3.53 36.85 6.01
488 489 2.202388 CAGCAATGAAGCACGCGG 60.202 61.111 12.47 0.00 36.85 6.46
489 490 4.107051 AGCAATGAAGCACGCGGC 62.107 61.111 12.47 11.61 45.30 6.53
508 509 0.952280 CAAGGATGCAGGCATAGCAG 59.048 55.000 6.76 0.00 46.36 4.24
509 510 0.178998 AAGGATGCAGGCATAGCAGG 60.179 55.000 6.76 0.00 46.36 4.85
510 511 1.058428 AGGATGCAGGCATAGCAGGA 61.058 55.000 6.76 0.00 46.36 3.86
511 512 0.605860 GGATGCAGGCATAGCAGGAG 60.606 60.000 6.76 0.00 46.36 3.69
512 513 0.605860 GATGCAGGCATAGCAGGAGG 60.606 60.000 6.76 0.00 46.36 4.30
513 514 2.065470 ATGCAGGCATAGCAGGAGGG 62.065 60.000 4.68 0.00 46.36 4.30
514 515 2.834688 CAGGCATAGCAGGAGGGG 59.165 66.667 0.00 0.00 0.00 4.79
515 516 3.174265 AGGCATAGCAGGAGGGGC 61.174 66.667 0.00 0.00 0.00 5.80
516 517 3.492353 GGCATAGCAGGAGGGGCA 61.492 66.667 0.00 0.00 0.00 5.36
517 518 2.112718 GCATAGCAGGAGGGGCAG 59.887 66.667 0.00 0.00 0.00 4.85
518 519 2.834688 CATAGCAGGAGGGGCAGG 59.165 66.667 0.00 0.00 0.00 4.85
519 520 2.449322 ATAGCAGGAGGGGCAGGG 60.449 66.667 0.00 0.00 0.00 4.45
538 539 2.203126 GCAAGGATGGCGGAGGAG 60.203 66.667 0.00 0.00 0.00 3.69
539 540 2.203126 CAAGGATGGCGGAGGAGC 60.203 66.667 0.00 0.00 0.00 4.70
540 541 2.688666 AAGGATGGCGGAGGAGCA 60.689 61.111 0.00 0.00 39.27 4.26
541 542 2.739996 AAGGATGGCGGAGGAGCAG 61.740 63.158 0.00 0.00 39.27 4.24
542 543 4.247380 GGATGGCGGAGGAGCAGG 62.247 72.222 0.00 0.00 39.27 4.85
543 544 4.925861 GATGGCGGAGGAGCAGGC 62.926 72.222 0.00 0.00 39.27 4.85
555 556 4.881440 GCAGGCGGCATGGATGGA 62.881 66.667 16.99 0.00 43.97 3.41
556 557 2.593725 CAGGCGGCATGGATGGAG 60.594 66.667 13.08 0.00 0.00 3.86
557 558 3.092511 AGGCGGCATGGATGGAGT 61.093 61.111 13.08 0.00 0.00 3.85
558 559 2.903855 GGCGGCATGGATGGAGTG 60.904 66.667 3.07 0.00 0.00 3.51
559 560 3.589881 GCGGCATGGATGGAGTGC 61.590 66.667 0.00 0.00 38.12 4.40
560 561 2.124612 CGGCATGGATGGAGTGCA 60.125 61.111 0.00 0.00 40.53 4.57
561 562 2.184830 CGGCATGGATGGAGTGCAG 61.185 63.158 0.00 0.00 40.53 4.41
562 563 1.826921 GGCATGGATGGAGTGCAGG 60.827 63.158 0.00 0.00 40.53 4.85
563 564 1.225426 GCATGGATGGAGTGCAGGA 59.775 57.895 0.00 0.00 38.68 3.86
564 565 0.394762 GCATGGATGGAGTGCAGGAA 60.395 55.000 0.00 0.00 38.68 3.36
565 566 1.676746 CATGGATGGAGTGCAGGAAG 58.323 55.000 0.00 0.00 30.96 3.46
566 567 1.064906 CATGGATGGAGTGCAGGAAGT 60.065 52.381 0.00 0.00 30.96 3.01
567 568 0.325933 TGGATGGAGTGCAGGAAGTG 59.674 55.000 0.00 0.00 0.00 3.16
568 569 0.615331 GGATGGAGTGCAGGAAGTGA 59.385 55.000 0.00 0.00 0.00 3.41
569 570 1.211457 GGATGGAGTGCAGGAAGTGAT 59.789 52.381 0.00 0.00 0.00 3.06
570 571 2.559440 GATGGAGTGCAGGAAGTGATC 58.441 52.381 0.00 0.00 0.00 2.92
582 583 2.483745 GTGATCCGTCACGCTCGA 59.516 61.111 0.00 0.00 44.71 4.04
583 584 1.583967 GTGATCCGTCACGCTCGAG 60.584 63.158 8.45 8.45 44.71 4.04
584 585 2.652496 GATCCGTCACGCTCGAGC 60.652 66.667 27.64 27.64 37.78 5.03
585 586 3.396911 GATCCGTCACGCTCGAGCA 62.397 63.158 34.69 15.09 42.21 4.26
586 587 2.669808 GATCCGTCACGCTCGAGCAT 62.670 60.000 34.69 20.57 42.21 3.79
587 588 2.284798 ATCCGTCACGCTCGAGCATT 62.285 55.000 34.69 19.69 42.21 3.56
588 589 2.691522 CGTCACGCTCGAGCATTG 59.308 61.111 34.69 28.78 42.21 2.82
589 590 1.801512 CGTCACGCTCGAGCATTGA 60.802 57.895 34.69 30.37 42.21 2.57
590 591 1.142185 CGTCACGCTCGAGCATTGAT 61.142 55.000 34.69 13.13 42.21 2.57
591 592 1.002366 GTCACGCTCGAGCATTGATT 58.998 50.000 34.69 10.18 42.21 2.57
592 593 1.394917 GTCACGCTCGAGCATTGATTT 59.605 47.619 34.69 8.43 42.21 2.17
593 594 1.660607 TCACGCTCGAGCATTGATTTC 59.339 47.619 34.69 4.54 42.21 2.17
594 595 0.647410 ACGCTCGAGCATTGATTTCG 59.353 50.000 34.69 18.32 42.21 3.46
595 596 0.647410 CGCTCGAGCATTGATTTCGT 59.353 50.000 34.69 0.00 42.21 3.85
596 597 1.061131 CGCTCGAGCATTGATTTCGTT 59.939 47.619 34.69 0.00 42.21 3.85
597 598 2.474526 CGCTCGAGCATTGATTTCGTTT 60.475 45.455 34.69 0.00 42.21 3.60
598 599 3.492313 GCTCGAGCATTGATTTCGTTTT 58.508 40.909 31.91 0.00 41.59 2.43
599 600 3.299020 GCTCGAGCATTGATTTCGTTTTG 59.701 43.478 31.91 0.00 41.59 2.44
600 601 3.820689 TCGAGCATTGATTTCGTTTTGG 58.179 40.909 0.00 0.00 35.90 3.28
601 602 3.252215 TCGAGCATTGATTTCGTTTTGGT 59.748 39.130 0.00 0.00 35.90 3.67
602 603 4.452795 TCGAGCATTGATTTCGTTTTGGTA 59.547 37.500 0.00 0.00 35.90 3.25
603 604 5.123186 TCGAGCATTGATTTCGTTTTGGTAT 59.877 36.000 0.00 0.00 35.90 2.73
604 605 5.227805 CGAGCATTGATTTCGTTTTGGTATG 59.772 40.000 0.00 0.00 0.00 2.39
605 606 5.410067 AGCATTGATTTCGTTTTGGTATGG 58.590 37.500 0.00 0.00 0.00 2.74
606 607 4.032786 GCATTGATTTCGTTTTGGTATGGC 59.967 41.667 0.00 0.00 0.00 4.40
607 608 3.859411 TGATTTCGTTTTGGTATGGCC 57.141 42.857 0.00 0.00 37.90 5.36
608 609 2.162608 TGATTTCGTTTTGGTATGGCCG 59.837 45.455 0.00 0.00 41.21 6.13
609 610 0.882474 TTTCGTTTTGGTATGGCCGG 59.118 50.000 0.00 0.00 41.21 6.13
610 611 0.036448 TTCGTTTTGGTATGGCCGGA 59.964 50.000 5.05 0.00 41.21 5.14
611 612 0.253610 TCGTTTTGGTATGGCCGGAT 59.746 50.000 5.05 0.00 41.21 4.18
612 613 1.099689 CGTTTTGGTATGGCCGGATT 58.900 50.000 5.05 0.00 41.21 3.01
613 614 1.202245 CGTTTTGGTATGGCCGGATTG 60.202 52.381 5.05 0.00 41.21 2.67
614 615 1.822371 GTTTTGGTATGGCCGGATTGT 59.178 47.619 5.05 0.00 41.21 2.71
615 616 2.223803 TTTGGTATGGCCGGATTGTT 57.776 45.000 5.05 0.00 41.21 2.83
616 617 1.468985 TTGGTATGGCCGGATTGTTG 58.531 50.000 5.05 0.00 41.21 3.33
617 618 0.621082 TGGTATGGCCGGATTGTTGA 59.379 50.000 5.05 0.00 41.21 3.18
618 619 1.004862 TGGTATGGCCGGATTGTTGAA 59.995 47.619 5.05 0.00 41.21 2.69
619 620 1.404035 GGTATGGCCGGATTGTTGAAC 59.596 52.381 5.05 0.00 0.00 3.18
620 621 2.365582 GTATGGCCGGATTGTTGAACT 58.634 47.619 5.05 0.00 0.00 3.01
621 622 2.799126 ATGGCCGGATTGTTGAACTA 57.201 45.000 5.05 0.00 0.00 2.24
622 623 2.799126 TGGCCGGATTGTTGAACTAT 57.201 45.000 5.05 0.00 0.00 2.12
623 624 3.916359 TGGCCGGATTGTTGAACTATA 57.084 42.857 5.05 0.00 0.00 1.31
624 625 4.223556 TGGCCGGATTGTTGAACTATAA 57.776 40.909 5.05 0.00 0.00 0.98
625 626 4.787551 TGGCCGGATTGTTGAACTATAAT 58.212 39.130 5.05 0.00 0.00 1.28
626 627 5.197451 TGGCCGGATTGTTGAACTATAATT 58.803 37.500 5.05 0.00 0.00 1.40
627 628 5.654650 TGGCCGGATTGTTGAACTATAATTT 59.345 36.000 5.05 0.00 0.00 1.82
628 629 6.829298 TGGCCGGATTGTTGAACTATAATTTA 59.171 34.615 5.05 0.00 0.00 1.40
629 630 7.504238 TGGCCGGATTGTTGAACTATAATTTAT 59.496 33.333 5.05 0.00 0.00 1.40
630 631 7.807907 GGCCGGATTGTTGAACTATAATTTATG 59.192 37.037 5.05 0.00 0.00 1.90
631 632 8.349983 GCCGGATTGTTGAACTATAATTTATGT 58.650 33.333 5.05 0.00 0.00 2.29
648 649 8.810652 AATTTATGTTGCTTTATCGTGTTTGT 57.189 26.923 0.00 0.00 0.00 2.83
649 650 8.810652 ATTTATGTTGCTTTATCGTGTTTGTT 57.189 26.923 0.00 0.00 0.00 2.83
650 651 8.635877 TTTATGTTGCTTTATCGTGTTTGTTT 57.364 26.923 0.00 0.00 0.00 2.83
651 652 6.747659 ATGTTGCTTTATCGTGTTTGTTTC 57.252 33.333 0.00 0.00 0.00 2.78
652 653 4.731000 TGTTGCTTTATCGTGTTTGTTTCG 59.269 37.500 0.00 0.00 0.00 3.46
653 654 4.797693 TGCTTTATCGTGTTTGTTTCGA 57.202 36.364 0.00 0.00 37.96 3.71
654 655 5.158101 TGCTTTATCGTGTTTGTTTCGAA 57.842 34.783 0.00 0.00 37.16 3.71
655 656 4.965158 TGCTTTATCGTGTTTGTTTCGAAC 59.035 37.500 0.00 0.00 37.16 3.95
656 657 5.202640 GCTTTATCGTGTTTGTTTCGAACT 58.797 37.500 0.00 0.00 37.16 3.01
657 658 6.018913 TGCTTTATCGTGTTTGTTTCGAACTA 60.019 34.615 0.00 0.00 37.16 2.24
658 659 7.013529 GCTTTATCGTGTTTGTTTCGAACTAT 58.986 34.615 0.00 0.00 37.16 2.12
659 660 7.532884 GCTTTATCGTGTTTGTTTCGAACTATT 59.467 33.333 0.00 0.00 37.16 1.73
660 661 8.702408 TTTATCGTGTTTGTTTCGAACTATTG 57.298 30.769 0.00 0.00 37.16 1.90
661 662 5.970140 TCGTGTTTGTTTCGAACTATTGA 57.030 34.783 0.00 0.00 0.00 2.57
662 663 6.533819 TCGTGTTTGTTTCGAACTATTGAT 57.466 33.333 0.00 0.00 0.00 2.57
663 664 6.950545 TCGTGTTTGTTTCGAACTATTGATT 58.049 32.000 0.00 0.00 0.00 2.57
664 665 8.074474 TCGTGTTTGTTTCGAACTATTGATTA 57.926 30.769 0.00 0.00 0.00 1.75
665 666 8.549548 TCGTGTTTGTTTCGAACTATTGATTAA 58.450 29.630 0.00 0.00 0.00 1.40
666 667 9.160576 CGTGTTTGTTTCGAACTATTGATTAAA 57.839 29.630 0.00 0.00 0.00 1.52
691 692 9.950680 AATTGAAATGGTTTGTATCGTATGATC 57.049 29.630 0.00 0.00 35.99 2.92
692 693 7.172654 TGAAATGGTTTGTATCGTATGATCG 57.827 36.000 0.00 0.00 35.99 3.69
693 694 6.981559 TGAAATGGTTTGTATCGTATGATCGA 59.018 34.615 0.00 0.00 43.86 3.59
694 695 6.764877 AATGGTTTGTATCGTATGATCGAC 57.235 37.500 0.00 0.00 42.56 4.20
695 696 4.284485 TGGTTTGTATCGTATGATCGACG 58.716 43.478 12.46 12.46 42.56 5.12
696 697 4.201940 TGGTTTGTATCGTATGATCGACGT 60.202 41.667 16.71 0.00 42.56 4.34
697 698 4.145928 GGTTTGTATCGTATGATCGACGTG 59.854 45.833 16.71 0.00 42.56 4.49
698 699 2.912366 TGTATCGTATGATCGACGTGC 58.088 47.619 16.71 10.09 42.56 5.34
699 700 2.288458 TGTATCGTATGATCGACGTGCA 59.712 45.455 16.71 11.92 42.56 4.57
700 701 2.706555 ATCGTATGATCGACGTGCAT 57.293 45.000 16.71 9.41 42.56 3.96
701 702 1.753956 TCGTATGATCGACGTGCATG 58.246 50.000 16.71 3.82 41.11 4.06
702 703 1.332375 TCGTATGATCGACGTGCATGA 59.668 47.619 14.17 0.00 41.11 3.07
703 704 2.116366 CGTATGATCGACGTGCATGAA 58.884 47.619 14.17 0.00 35.58 2.57
704 705 2.726241 CGTATGATCGACGTGCATGAAT 59.274 45.455 14.17 2.91 35.58 2.57
705 706 3.181549 CGTATGATCGACGTGCATGAATC 60.182 47.826 14.17 12.34 35.58 2.52
706 707 2.584492 TGATCGACGTGCATGAATCT 57.416 45.000 14.17 0.00 0.00 2.40
707 708 3.708563 TGATCGACGTGCATGAATCTA 57.291 42.857 14.17 0.00 0.00 1.98
708 709 4.040445 TGATCGACGTGCATGAATCTAA 57.960 40.909 14.17 0.00 0.00 2.10
709 710 4.044426 TGATCGACGTGCATGAATCTAAG 58.956 43.478 14.17 0.00 0.00 2.18
710 711 3.775661 TCGACGTGCATGAATCTAAGA 57.224 42.857 14.17 0.00 0.00 2.10
711 712 4.104696 TCGACGTGCATGAATCTAAGAA 57.895 40.909 14.17 0.00 0.00 2.52
712 713 4.682787 TCGACGTGCATGAATCTAAGAAT 58.317 39.130 14.17 0.00 0.00 2.40
713 714 4.740205 TCGACGTGCATGAATCTAAGAATC 59.260 41.667 14.17 0.00 0.00 2.52
714 715 4.084849 CGACGTGCATGAATCTAAGAATCC 60.085 45.833 14.17 0.00 0.00 3.01
715 716 4.769688 ACGTGCATGAATCTAAGAATCCA 58.230 39.130 14.17 0.00 0.00 3.41
716 717 4.572389 ACGTGCATGAATCTAAGAATCCAC 59.428 41.667 14.17 0.00 0.00 4.02
717 718 4.571984 CGTGCATGAATCTAAGAATCCACA 59.428 41.667 0.00 0.00 0.00 4.17
718 719 5.237996 CGTGCATGAATCTAAGAATCCACAT 59.762 40.000 0.00 0.00 0.00 3.21
719 720 6.238566 CGTGCATGAATCTAAGAATCCACATT 60.239 38.462 0.00 0.00 0.00 2.71
720 721 7.486647 GTGCATGAATCTAAGAATCCACATTT 58.513 34.615 0.00 0.00 0.00 2.32
721 722 8.623903 GTGCATGAATCTAAGAATCCACATTTA 58.376 33.333 0.00 0.00 0.00 1.40
722 723 8.623903 TGCATGAATCTAAGAATCCACATTTAC 58.376 33.333 0.00 0.00 0.00 2.01
723 724 8.623903 GCATGAATCTAAGAATCCACATTTACA 58.376 33.333 0.00 0.00 0.00 2.41
739 740 6.974677 CATTTACAAATGTGGATATGCGAC 57.025 37.500 6.53 0.00 40.61 5.19
740 741 6.493978 CATTTACAAATGTGGATATGCGACA 58.506 36.000 6.53 2.93 40.61 4.35
741 742 6.502136 TTTACAAATGTGGATATGCGACAA 57.498 33.333 0.00 0.00 38.75 3.18
742 743 6.691754 TTACAAATGTGGATATGCGACAAT 57.308 33.333 0.00 0.00 38.75 2.71
743 744 5.173774 ACAAATGTGGATATGCGACAATC 57.826 39.130 4.24 0.00 38.75 2.67
744 745 4.036734 ACAAATGTGGATATGCGACAATCC 59.963 41.667 4.24 0.00 38.75 3.01
750 751 5.185668 TGGATATGCGACAATCCAAAATG 57.814 39.130 9.74 0.00 46.74 2.32
751 752 4.644234 TGGATATGCGACAATCCAAAATGT 59.356 37.500 9.74 0.00 46.74 2.71
752 753 5.825151 TGGATATGCGACAATCCAAAATGTA 59.175 36.000 9.74 0.00 46.74 2.29
753 754 6.489700 TGGATATGCGACAATCCAAAATGTAT 59.510 34.615 9.74 0.00 46.74 2.29
754 755 7.663493 TGGATATGCGACAATCCAAAATGTATA 59.337 33.333 9.74 0.00 46.74 1.47
755 756 7.962918 GGATATGCGACAATCCAAAATGTATAC 59.037 37.037 0.00 0.00 41.21 1.47
756 757 6.691754 ATGCGACAATCCAAAATGTATACA 57.308 33.333 8.27 8.27 0.00 2.29
757 758 6.117911 TGCGACAATCCAAAATGTATACAG 57.882 37.500 11.91 0.00 0.00 2.74
758 759 5.877564 TGCGACAATCCAAAATGTATACAGA 59.122 36.000 11.91 3.05 0.00 3.41
759 760 6.037062 TGCGACAATCCAAAATGTATACAGAG 59.963 38.462 11.91 1.22 0.00 3.35
760 761 6.257849 GCGACAATCCAAAATGTATACAGAGA 59.742 38.462 11.91 3.98 0.00 3.10
761 762 7.517417 GCGACAATCCAAAATGTATACAGAGAG 60.517 40.741 11.91 1.90 0.00 3.20
762 763 7.517417 CGACAATCCAAAATGTATACAGAGAGC 60.517 40.741 11.91 0.00 0.00 4.09
763 764 7.112122 ACAATCCAAAATGTATACAGAGAGCA 58.888 34.615 11.91 0.00 0.00 4.26
764 765 7.776969 ACAATCCAAAATGTATACAGAGAGCAT 59.223 33.333 11.91 0.00 0.00 3.79
765 766 7.741027 ATCCAAAATGTATACAGAGAGCATG 57.259 36.000 11.91 3.73 0.00 4.06
766 767 6.888105 TCCAAAATGTATACAGAGAGCATGA 58.112 36.000 11.91 0.00 0.00 3.07
767 768 7.512130 TCCAAAATGTATACAGAGAGCATGAT 58.488 34.615 11.91 0.00 0.00 2.45
768 769 7.994911 TCCAAAATGTATACAGAGAGCATGATT 59.005 33.333 11.91 0.00 0.00 2.57
769 770 8.627403 CCAAAATGTATACAGAGAGCATGATTT 58.373 33.333 11.91 0.28 0.00 2.17
770 771 9.447040 CAAAATGTATACAGAGAGCATGATTTG 57.553 33.333 11.91 6.09 0.00 2.32
784 785 5.361135 CATGATTTGCAAGTGTGTGTAGA 57.639 39.130 0.00 0.00 0.00 2.59
785 786 5.946298 CATGATTTGCAAGTGTGTGTAGAT 58.054 37.500 0.00 0.00 0.00 1.98
786 787 5.361135 TGATTTGCAAGTGTGTGTAGATG 57.639 39.130 0.00 0.00 0.00 2.90
787 788 3.624326 TTTGCAAGTGTGTGTAGATGC 57.376 42.857 0.00 0.00 0.00 3.91
788 789 2.549064 TGCAAGTGTGTGTAGATGCT 57.451 45.000 0.00 0.00 34.97 3.79
789 790 2.849942 TGCAAGTGTGTGTAGATGCTT 58.150 42.857 0.00 0.00 34.97 3.91
790 791 4.001618 TGCAAGTGTGTGTAGATGCTTA 57.998 40.909 0.00 0.00 34.97 3.09
791 792 3.996363 TGCAAGTGTGTGTAGATGCTTAG 59.004 43.478 0.00 0.00 34.97 2.18
792 793 3.372206 GCAAGTGTGTGTAGATGCTTAGG 59.628 47.826 0.00 0.00 0.00 2.69
793 794 3.895232 AGTGTGTGTAGATGCTTAGGG 57.105 47.619 0.00 0.00 0.00 3.53
794 795 2.501723 AGTGTGTGTAGATGCTTAGGGG 59.498 50.000 0.00 0.00 0.00 4.79
795 796 1.837439 TGTGTGTAGATGCTTAGGGGG 59.163 52.381 0.00 0.00 0.00 5.40
796 797 0.837272 TGTGTAGATGCTTAGGGGGC 59.163 55.000 0.00 0.00 0.00 5.80
797 798 0.108774 GTGTAGATGCTTAGGGGGCC 59.891 60.000 0.00 0.00 0.00 5.80
798 799 0.327095 TGTAGATGCTTAGGGGGCCA 60.327 55.000 4.39 0.00 0.00 5.36
799 800 0.843984 GTAGATGCTTAGGGGGCCAA 59.156 55.000 4.39 0.00 0.00 4.52
800 801 0.843984 TAGATGCTTAGGGGGCCAAC 59.156 55.000 4.39 0.00 0.00 3.77
801 802 1.455773 GATGCTTAGGGGGCCAACC 60.456 63.158 4.39 6.29 39.11 3.77
984 989 2.517402 TCCGTGGCACCAACCAAC 60.517 61.111 12.86 0.00 42.70 3.77
985 990 3.601685 CCGTGGCACCAACCAACC 61.602 66.667 12.86 0.00 42.70 3.77
986 991 3.959975 CGTGGCACCAACCAACCG 61.960 66.667 12.86 0.00 42.70 4.44
987 992 4.279043 GTGGCACCAACCAACCGC 62.279 66.667 6.29 0.00 42.70 5.68
1103 1108 4.148825 CAGGGTCTCCTTCCGGCG 62.149 72.222 0.00 0.00 42.67 6.46
1261 1275 3.974757 CCCTATCCGTCCGACGCC 61.975 72.222 15.64 0.00 40.91 5.68
1271 1285 1.153208 TCCGACGCCTAGACTCTCC 60.153 63.158 0.00 0.00 0.00 3.71
1277 1291 2.103601 GACGCCTAGACTCTCCTCTACT 59.896 54.545 0.00 0.00 0.00 2.57
1303 1317 3.674997 AGTGAAAGATGCTCCGCTTTTA 58.325 40.909 0.00 0.00 34.69 1.52
1363 1377 1.576421 GTGCTTGTGCTTCGGGAAG 59.424 57.895 4.06 4.06 41.24 3.46
1373 1387 2.962421 TGCTTCGGGAAGGAAATGTTTT 59.038 40.909 10.22 0.00 35.80 2.43
1384 1398 6.362551 GGAAGGAAATGTTTTAAAACGAGCTC 59.637 38.462 22.57 16.17 41.74 4.09
1401 1415 1.304134 TCCTGTGGCGTCTCAGCTA 60.304 57.895 13.45 1.22 37.29 3.32
1440 1454 5.500931 CGAAGTTGTAATCTGCGATTCCTTC 60.501 44.000 6.99 11.66 36.18 3.46
1576 1590 2.183555 CCGGAGGTGCGTACTTCC 59.816 66.667 22.37 22.37 46.58 3.46
1632 1646 4.541779 GTCGATGAGTGCTTACCTCTATG 58.458 47.826 0.00 0.00 0.00 2.23
1644 1658 3.975168 ACCTCTATGGCGTTGTACTTT 57.025 42.857 0.00 0.00 40.22 2.66
1674 1800 4.040829 TCACAAAGGACATGACATCTCAGT 59.959 41.667 0.00 0.00 0.00 3.41
1821 1952 5.653255 AAGCACCAAGATAATCCATACCT 57.347 39.130 0.00 0.00 0.00 3.08
1846 1977 7.465900 TCCCCTTTTCTGTATCTAATGGATT 57.534 36.000 0.00 0.00 35.98 3.01
1888 2019 6.335777 AGCTGCAGCATTAGGAAATTTAAAG 58.664 36.000 38.24 0.00 45.16 1.85
2092 2223 4.641989 AGTTGAGTAATCATGAATGGTGCC 59.358 41.667 0.00 0.00 0.00 5.01
2190 2321 2.300433 TCAGTCAATGCTGCACTTGTT 58.700 42.857 3.57 0.00 36.49 2.83
2299 2431 5.182570 ACCTGATTTGATATGCCATTCATCG 59.817 40.000 0.00 0.00 36.63 3.84
2443 2575 6.128172 GCAGGTATATCATTGCCACTCAATAC 60.128 42.308 0.00 0.00 43.21 1.89
2445 2577 7.663081 CAGGTATATCATTGCCACTCAATACTT 59.337 37.037 0.00 0.00 43.21 2.24
2657 2794 9.226345 GATAATTTGATTGTTCTCCGAACATTC 57.774 33.333 17.83 17.83 33.52 2.67
2705 2842 7.627585 TGTGTTCTATCGTTTTAGTGTGTAC 57.372 36.000 0.00 0.00 0.00 2.90
2769 2906 7.915293 TTTATTCACGAATTACTGGTGATGT 57.085 32.000 0.00 0.00 40.10 3.06
3000 3138 4.083802 CGTCTGTTGGACCTTTCATTCTTC 60.084 45.833 0.00 0.00 41.64 2.87
3257 3395 1.981256 TTTGAGAACCTGGAACTGCC 58.019 50.000 0.00 0.00 37.10 4.85
3273 3411 5.221843 GGAACTGCCATATGGGTTATCTGTA 60.222 44.000 23.30 0.00 39.65 2.74
3340 3479 2.682856 CGTCCCATTGAACAATACAGGG 59.317 50.000 12.40 12.40 34.52 4.45
3365 3504 7.231607 GCATGCAACTTTATTCACTTGAATTG 58.768 34.615 14.21 4.24 41.64 2.32
3412 3551 3.972133 TGCAAAGATGGGAGTGATGATT 58.028 40.909 0.00 0.00 0.00 2.57
3691 3830 3.568430 CCAACCAGGGTCAGTTAGTTTTC 59.432 47.826 0.00 0.00 0.00 2.29
3805 3946 5.623956 TTTGTAGAGGTTGAGTTCCTGAA 57.376 39.130 0.00 0.00 35.20 3.02
3808 3949 4.838423 TGTAGAGGTTGAGTTCCTGAATGA 59.162 41.667 0.00 0.00 35.20 2.57
3824 3966 5.048224 CCTGAATGATGTTGCTTCTTTCTGT 60.048 40.000 9.97 0.00 31.81 3.41
3858 4000 7.257722 ACATATATACTTGCTTGTTTGGTTGC 58.742 34.615 0.00 0.00 0.00 4.17
3863 4005 3.118665 ACTTGCTTGTTTGGTTGCTCATT 60.119 39.130 0.00 0.00 0.00 2.57
3931 4073 5.916661 TCTTACCTTACTTCTAGCAGTGG 57.083 43.478 5.19 1.48 0.00 4.00
4011 4165 9.672086 TTGCACAACACTTTGACTTTATTATAC 57.328 29.630 0.00 0.00 36.48 1.47
4042 4196 7.159372 ACGAAATACAGTGAAGGACAGTTTAT 58.841 34.615 0.00 0.00 0.00 1.40
4043 4197 7.331193 ACGAAATACAGTGAAGGACAGTTTATC 59.669 37.037 0.00 0.00 28.36 1.75
4044 4198 7.462856 CGAAATACAGTGAAGGACAGTTTATCG 60.463 40.741 0.00 0.00 28.36 2.92
4045 4199 3.926616 ACAGTGAAGGACAGTTTATCGG 58.073 45.455 0.00 0.00 0.00 4.18
4046 4200 3.262420 CAGTGAAGGACAGTTTATCGGG 58.738 50.000 0.00 0.00 0.00 5.14
4199 4358 4.312152 ACGGGGAGTCGGGGACTT 62.312 66.667 0.00 0.00 43.53 3.01
4200 4359 3.771160 CGGGGAGTCGGGGACTTG 61.771 72.222 0.00 0.00 43.53 3.16
4201 4360 3.400054 GGGGAGTCGGGGACTTGG 61.400 72.222 0.00 0.00 43.53 3.61
4206 4365 2.112297 GTCGGGGACTTGGTGCAA 59.888 61.111 0.00 0.00 0.00 4.08
4332 4492 1.280133 CCTCTCCAGCATGTCCTTCAA 59.720 52.381 0.00 0.00 0.00 2.69
4363 4523 0.036010 ACCTCAGCTGCACCACATAC 60.036 55.000 9.47 0.00 0.00 2.39
4422 4603 1.285023 GCTTGGAGCTTGCTGTGTG 59.715 57.895 0.00 0.00 38.45 3.82
4427 4608 1.895707 GAGCTTGCTGTGTGGTGCT 60.896 57.895 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.243095 AAGGACCACTACGAAGCGTC 59.757 55.000 0.00 0.00 41.54 5.19
1 2 1.538047 TAAGGACCACTACGAAGCGT 58.462 50.000 0.00 0.00 44.35 5.07
2 3 2.257034 GTTAAGGACCACTACGAAGCG 58.743 52.381 0.00 0.00 0.00 4.68
14 15 2.089201 CAATTCCGGGTGGTTAAGGAC 58.911 52.381 0.00 0.00 36.30 3.85
15 16 1.706305 ACAATTCCGGGTGGTTAAGGA 59.294 47.619 0.00 0.00 36.30 3.36
16 17 1.816224 CACAATTCCGGGTGGTTAAGG 59.184 52.381 0.00 0.00 36.30 2.69
17 18 1.201414 GCACAATTCCGGGTGGTTAAG 59.799 52.381 0.00 0.00 35.58 1.85
18 19 1.249407 GCACAATTCCGGGTGGTTAA 58.751 50.000 0.00 0.00 35.58 2.01
19 20 0.609681 GGCACAATTCCGGGTGGTTA 60.610 55.000 0.00 0.00 35.58 2.85
20 21 1.906333 GGCACAATTCCGGGTGGTT 60.906 57.895 0.00 0.00 35.58 3.67
21 22 2.282887 GGCACAATTCCGGGTGGT 60.283 61.111 0.00 0.00 35.58 4.16
22 23 2.035626 AGGCACAATTCCGGGTGG 59.964 61.111 0.00 0.00 35.58 4.61
23 24 1.002134 AGAGGCACAATTCCGGGTG 60.002 57.895 0.00 2.34 38.05 4.61
24 25 1.201429 AGAGAGGCACAATTCCGGGT 61.201 55.000 0.00 0.00 0.00 5.28
25 26 0.462759 GAGAGAGGCACAATTCCGGG 60.463 60.000 0.00 0.00 0.00 5.73
26 27 0.807667 CGAGAGAGGCACAATTCCGG 60.808 60.000 0.00 0.00 0.00 5.14
27 28 1.424493 GCGAGAGAGGCACAATTCCG 61.424 60.000 0.00 0.00 0.00 4.30
28 29 1.092345 GGCGAGAGAGGCACAATTCC 61.092 60.000 0.00 0.00 36.61 3.01
29 30 1.092345 GGGCGAGAGAGGCACAATTC 61.092 60.000 0.00 0.00 38.57 2.17
30 31 1.078143 GGGCGAGAGAGGCACAATT 60.078 57.895 0.00 0.00 38.57 2.32
31 32 2.586792 GGGCGAGAGAGGCACAAT 59.413 61.111 0.00 0.00 38.57 2.71
32 33 3.706373 GGGGCGAGAGAGGCACAA 61.706 66.667 0.00 0.00 40.16 3.33
52 53 1.191096 CTATCAATTTTGCACCGCGC 58.809 50.000 0.00 0.00 42.89 6.86
53 54 2.823196 TCTATCAATTTTGCACCGCG 57.177 45.000 0.00 0.00 0.00 6.46
54 55 4.558538 AGATCTATCAATTTTGCACCGC 57.441 40.909 0.00 0.00 0.00 5.68
55 56 5.333339 CCGTAGATCTATCAATTTTGCACCG 60.333 44.000 5.57 0.00 0.00 4.94
56 57 5.560953 GCCGTAGATCTATCAATTTTGCACC 60.561 44.000 5.57 0.00 0.00 5.01
57 58 5.237344 AGCCGTAGATCTATCAATTTTGCAC 59.763 40.000 5.57 0.00 0.00 4.57
58 59 5.237127 CAGCCGTAGATCTATCAATTTTGCA 59.763 40.000 5.57 0.00 0.00 4.08
59 60 5.466728 TCAGCCGTAGATCTATCAATTTTGC 59.533 40.000 5.57 1.06 0.00 3.68
60 61 7.172190 ACATCAGCCGTAGATCTATCAATTTTG 59.828 37.037 5.57 3.18 0.00 2.44
61 62 7.220030 ACATCAGCCGTAGATCTATCAATTTT 58.780 34.615 5.57 0.00 0.00 1.82
62 63 6.763355 ACATCAGCCGTAGATCTATCAATTT 58.237 36.000 5.57 0.00 0.00 1.82
63 64 6.352016 ACATCAGCCGTAGATCTATCAATT 57.648 37.500 5.57 0.00 0.00 2.32
64 65 5.392487 CGACATCAGCCGTAGATCTATCAAT 60.392 44.000 5.57 0.00 0.00 2.57
65 66 4.083271 CGACATCAGCCGTAGATCTATCAA 60.083 45.833 5.57 0.00 0.00 2.57
66 67 3.437049 CGACATCAGCCGTAGATCTATCA 59.563 47.826 5.57 0.00 0.00 2.15
67 68 3.729462 GCGACATCAGCCGTAGATCTATC 60.729 52.174 5.57 0.00 0.00 2.08
68 69 2.162608 GCGACATCAGCCGTAGATCTAT 59.837 50.000 5.57 0.00 0.00 1.98
69 70 1.535896 GCGACATCAGCCGTAGATCTA 59.464 52.381 0.00 0.00 0.00 1.98
70 71 0.312416 GCGACATCAGCCGTAGATCT 59.688 55.000 0.00 0.00 0.00 2.75
71 72 0.030773 TGCGACATCAGCCGTAGATC 59.969 55.000 0.00 0.00 0.00 2.75
72 73 0.031314 CTGCGACATCAGCCGTAGAT 59.969 55.000 0.00 0.00 40.14 1.98
73 74 1.433471 CTGCGACATCAGCCGTAGA 59.567 57.895 0.00 0.00 40.14 2.59
74 75 4.003534 CTGCGACATCAGCCGTAG 57.996 61.111 0.00 0.00 32.80 3.51
80 81 1.091771 AAATCCGGCTGCGACATCAG 61.092 55.000 0.00 0.00 37.15 2.90
81 82 1.078497 AAATCCGGCTGCGACATCA 60.078 52.632 0.00 0.00 0.00 3.07
82 83 1.089481 TCAAATCCGGCTGCGACATC 61.089 55.000 0.00 0.00 0.00 3.06
83 84 1.078497 TCAAATCCGGCTGCGACAT 60.078 52.632 0.00 0.00 0.00 3.06
84 85 2.032634 GTCAAATCCGGCTGCGACA 61.033 57.895 0.00 0.00 0.00 4.35
85 86 2.785258 GTCAAATCCGGCTGCGAC 59.215 61.111 0.00 0.00 0.00 5.19
86 87 2.813474 CGTCAAATCCGGCTGCGA 60.813 61.111 0.00 0.00 0.00 5.10
87 88 4.520846 GCGTCAAATCCGGCTGCG 62.521 66.667 0.00 3.81 0.00 5.18
88 89 3.430862 TGCGTCAAATCCGGCTGC 61.431 61.111 0.00 0.00 0.00 5.25
89 90 2.480555 GTGCGTCAAATCCGGCTG 59.519 61.111 0.00 0.00 0.00 4.85
90 91 2.746277 GGTGCGTCAAATCCGGCT 60.746 61.111 0.00 0.00 0.00 5.52
91 92 3.810896 GGGTGCGTCAAATCCGGC 61.811 66.667 0.00 0.00 0.00 6.13
92 93 3.496131 CGGGTGCGTCAAATCCGG 61.496 66.667 0.00 0.00 37.35 5.14
93 94 3.496131 CCGGGTGCGTCAAATCCG 61.496 66.667 0.00 0.00 40.32 4.18
94 95 3.810896 GCCGGGTGCGTCAAATCC 61.811 66.667 2.18 0.00 0.00 3.01
112 113 3.281359 AAAGACGCAATTGCCGGCC 62.281 57.895 26.77 6.80 37.91 6.13
113 114 2.088178 CAAAGACGCAATTGCCGGC 61.088 57.895 22.73 22.73 37.91 6.13
114 115 0.729140 GACAAAGACGCAATTGCCGG 60.729 55.000 24.24 13.83 37.91 6.13
115 116 0.040514 TGACAAAGACGCAATTGCCG 60.041 50.000 24.24 20.12 37.91 5.69
116 117 1.987770 CATGACAAAGACGCAATTGCC 59.012 47.619 24.24 11.53 37.91 4.52
117 118 1.987770 CCATGACAAAGACGCAATTGC 59.012 47.619 20.76 20.76 37.78 3.56
118 119 3.557577 TCCATGACAAAGACGCAATTG 57.442 42.857 0.00 0.00 0.00 2.32
119 120 4.487948 CAATCCATGACAAAGACGCAATT 58.512 39.130 0.00 0.00 0.00 2.32
120 121 3.119388 CCAATCCATGACAAAGACGCAAT 60.119 43.478 0.00 0.00 0.00 3.56
121 122 2.228582 CCAATCCATGACAAAGACGCAA 59.771 45.455 0.00 0.00 0.00 4.85
122 123 1.811965 CCAATCCATGACAAAGACGCA 59.188 47.619 0.00 0.00 0.00 5.24
123 124 1.468054 GCCAATCCATGACAAAGACGC 60.468 52.381 0.00 0.00 0.00 5.19
124 125 1.133025 GGCCAATCCATGACAAAGACG 59.867 52.381 0.00 0.00 34.01 4.18
125 126 1.133025 CGGCCAATCCATGACAAAGAC 59.867 52.381 2.24 0.00 34.01 3.01
126 127 1.462616 CGGCCAATCCATGACAAAGA 58.537 50.000 2.24 0.00 34.01 2.52
127 128 0.457035 CCGGCCAATCCATGACAAAG 59.543 55.000 2.24 0.00 34.01 2.77
128 129 0.969917 CCCGGCCAATCCATGACAAA 60.970 55.000 2.24 0.00 34.01 2.83
129 130 1.379710 CCCGGCCAATCCATGACAA 60.380 57.895 2.24 0.00 34.01 3.18
130 131 2.275089 CCCGGCCAATCCATGACA 59.725 61.111 2.24 0.00 34.01 3.58
131 132 2.120909 CACCCGGCCAATCCATGAC 61.121 63.158 2.24 0.00 34.01 3.06
132 133 2.275089 CACCCGGCCAATCCATGA 59.725 61.111 2.24 0.00 34.01 3.07
133 134 3.530260 GCACCCGGCCAATCCATG 61.530 66.667 2.24 0.00 36.11 3.66
149 150 3.050275 GGGGCTATGCGATTCGGC 61.050 66.667 8.34 2.37 0.00 5.54
150 151 1.669115 CAGGGGCTATGCGATTCGG 60.669 63.158 8.34 0.00 0.00 4.30
151 152 2.320587 GCAGGGGCTATGCGATTCG 61.321 63.158 0.62 0.62 36.96 3.34
152 153 0.819259 TTGCAGGGGCTATGCGATTC 60.819 55.000 9.33 0.00 46.87 2.52
153 154 0.178981 ATTGCAGGGGCTATGCGATT 60.179 50.000 10.26 0.00 43.75 3.34
154 155 0.892358 CATTGCAGGGGCTATGCGAT 60.892 55.000 10.26 10.26 46.48 4.58
155 156 1.526686 CATTGCAGGGGCTATGCGA 60.527 57.895 6.83 6.83 46.87 5.10
156 157 3.036577 CATTGCAGGGGCTATGCG 58.963 61.111 9.33 0.00 46.87 4.73
159 160 1.152368 GAGGCATTGCAGGGGCTAT 59.848 57.895 14.36 1.15 40.34 2.97
160 161 2.002977 AGAGGCATTGCAGGGGCTA 61.003 57.895 14.36 0.00 40.34 3.93
161 162 3.345028 AGAGGCATTGCAGGGGCT 61.345 61.111 14.29 14.29 43.26 5.19
162 163 3.145551 CAGAGGCATTGCAGGGGC 61.146 66.667 11.39 5.27 41.68 5.80
163 164 3.145551 GCAGAGGCATTGCAGGGG 61.146 66.667 11.39 0.00 41.17 4.79
164 165 3.515286 CGCAGAGGCATTGCAGGG 61.515 66.667 11.39 2.04 41.59 4.45
165 166 4.189188 GCGCAGAGGCATTGCAGG 62.189 66.667 11.39 0.00 41.59 4.85
166 167 4.189188 GGCGCAGAGGCATTGCAG 62.189 66.667 10.83 7.18 45.92 4.41
181 182 3.969802 GCCATACCTGCATGCGGC 61.970 66.667 21.64 17.95 45.13 6.53
182 183 3.289834 GGCCATACCTGCATGCGG 61.290 66.667 20.13 20.13 34.51 5.69
191 192 2.400467 TTAGAGGAGGAGGCCATACC 57.600 55.000 5.01 5.41 39.61 2.73
192 193 2.494073 CGATTAGAGGAGGAGGCCATAC 59.506 54.545 5.01 0.00 0.00 2.39
193 194 2.808919 CGATTAGAGGAGGAGGCCATA 58.191 52.381 5.01 0.00 0.00 2.74
194 195 1.638529 CGATTAGAGGAGGAGGCCAT 58.361 55.000 5.01 0.00 0.00 4.40
195 196 1.115930 GCGATTAGAGGAGGAGGCCA 61.116 60.000 5.01 0.00 0.00 5.36
196 197 0.830023 AGCGATTAGAGGAGGAGGCC 60.830 60.000 0.00 0.00 0.00 5.19
197 198 1.044611 AAGCGATTAGAGGAGGAGGC 58.955 55.000 0.00 0.00 0.00 4.70
198 199 1.342819 CCAAGCGATTAGAGGAGGAGG 59.657 57.143 0.00 0.00 0.00 4.30
199 200 2.311463 TCCAAGCGATTAGAGGAGGAG 58.689 52.381 0.00 0.00 0.00 3.69
200 201 2.454336 TCCAAGCGATTAGAGGAGGA 57.546 50.000 0.00 0.00 0.00 3.71
201 202 3.760580 AATCCAAGCGATTAGAGGAGG 57.239 47.619 0.00 0.00 39.53 4.30
202 203 4.509600 GTGAAATCCAAGCGATTAGAGGAG 59.490 45.833 0.00 0.00 40.47 3.69
203 204 4.162320 AGTGAAATCCAAGCGATTAGAGGA 59.838 41.667 0.00 0.00 40.47 3.71
204 205 4.446371 AGTGAAATCCAAGCGATTAGAGG 58.554 43.478 0.00 0.00 40.47 3.69
205 206 4.509600 GGAGTGAAATCCAAGCGATTAGAG 59.490 45.833 0.00 0.00 40.47 2.43
206 207 4.442706 GGAGTGAAATCCAAGCGATTAGA 58.557 43.478 0.00 0.00 40.47 2.10
207 208 3.246226 CGGAGTGAAATCCAAGCGATTAG 59.754 47.826 0.00 0.00 40.47 1.73
208 209 3.194861 CGGAGTGAAATCCAAGCGATTA 58.805 45.455 0.00 0.00 40.47 1.75
209 210 2.009774 CGGAGTGAAATCCAAGCGATT 58.990 47.619 0.00 0.00 43.34 3.34
210 211 1.066143 ACGGAGTGAAATCCAAGCGAT 60.066 47.619 0.00 0.00 42.51 4.58
211 212 0.320374 ACGGAGTGAAATCCAAGCGA 59.680 50.000 0.00 0.00 42.51 4.93
212 213 2.840974 ACGGAGTGAAATCCAAGCG 58.159 52.632 0.00 0.00 42.51 4.68
228 229 2.654912 GAACCGCCGACAAGTGACG 61.655 63.158 0.00 0.00 0.00 4.35
229 230 0.949105 ATGAACCGCCGACAAGTGAC 60.949 55.000 0.00 0.00 0.00 3.67
230 231 0.669318 GATGAACCGCCGACAAGTGA 60.669 55.000 0.00 0.00 0.00 3.41
231 232 0.948623 TGATGAACCGCCGACAAGTG 60.949 55.000 0.00 0.00 0.00 3.16
232 233 0.250124 TTGATGAACCGCCGACAAGT 60.250 50.000 0.00 0.00 0.00 3.16
233 234 0.165944 GTTGATGAACCGCCGACAAG 59.834 55.000 0.00 0.00 0.00 3.16
234 235 0.533085 TGTTGATGAACCGCCGACAA 60.533 50.000 0.00 0.00 0.00 3.18
235 236 0.533085 TTGTTGATGAACCGCCGACA 60.533 50.000 0.00 0.00 0.00 4.35
236 237 0.589223 TTTGTTGATGAACCGCCGAC 59.411 50.000 0.00 0.00 0.00 4.79
237 238 0.871722 CTTTGTTGATGAACCGCCGA 59.128 50.000 0.00 0.00 0.00 5.54
238 239 0.871722 TCTTTGTTGATGAACCGCCG 59.128 50.000 0.00 0.00 0.00 6.46
239 240 1.606668 TGTCTTTGTTGATGAACCGCC 59.393 47.619 0.00 0.00 0.00 6.13
240 241 3.058293 TCATGTCTTTGTTGATGAACCGC 60.058 43.478 0.00 0.00 0.00 5.68
241 242 4.466828 GTCATGTCTTTGTTGATGAACCG 58.533 43.478 0.00 0.00 0.00 4.44
242 243 4.613622 CGGTCATGTCTTTGTTGATGAACC 60.614 45.833 0.00 0.00 30.11 3.62
243 244 4.466828 CGGTCATGTCTTTGTTGATGAAC 58.533 43.478 0.00 0.00 0.00 3.18
244 245 3.501828 CCGGTCATGTCTTTGTTGATGAA 59.498 43.478 0.00 0.00 0.00 2.57
245 246 3.073678 CCGGTCATGTCTTTGTTGATGA 58.926 45.455 0.00 0.00 0.00 2.92
246 247 2.813754 ACCGGTCATGTCTTTGTTGATG 59.186 45.455 0.00 0.00 0.00 3.07
247 248 3.074412 GACCGGTCATGTCTTTGTTGAT 58.926 45.455 29.75 0.00 0.00 2.57
248 249 2.104111 AGACCGGTCATGTCTTTGTTGA 59.896 45.455 35.00 0.00 40.06 3.18
249 250 2.480419 GAGACCGGTCATGTCTTTGTTG 59.520 50.000 35.00 0.00 42.94 3.33
250 251 2.767505 GAGACCGGTCATGTCTTTGTT 58.232 47.619 35.00 11.46 42.94 2.83
251 252 1.336887 CGAGACCGGTCATGTCTTTGT 60.337 52.381 35.00 12.26 42.94 2.83
252 253 1.350193 CGAGACCGGTCATGTCTTTG 58.650 55.000 35.00 14.23 42.94 2.77
253 254 3.814577 CGAGACCGGTCATGTCTTT 57.185 52.632 35.00 13.86 42.94 2.52
287 288 4.796231 CAACGGGGAGCCGACGAG 62.796 72.222 0.00 0.00 36.94 4.18
294 295 2.252072 TATGACCAGCAACGGGGAGC 62.252 60.000 0.00 0.00 0.00 4.70
295 296 0.251916 TTATGACCAGCAACGGGGAG 59.748 55.000 0.00 0.00 0.00 4.30
296 297 0.693622 TTTATGACCAGCAACGGGGA 59.306 50.000 0.00 0.00 0.00 4.81
297 298 1.094785 CTTTATGACCAGCAACGGGG 58.905 55.000 0.00 0.00 0.00 5.73
298 299 1.468520 CACTTTATGACCAGCAACGGG 59.531 52.381 0.00 0.00 0.00 5.28
299 300 1.135689 GCACTTTATGACCAGCAACGG 60.136 52.381 0.00 0.00 0.00 4.44
300 301 1.135689 GGCACTTTATGACCAGCAACG 60.136 52.381 0.00 0.00 0.00 4.10
301 302 1.885887 TGGCACTTTATGACCAGCAAC 59.114 47.619 0.00 0.00 34.05 4.17
302 303 2.284754 TGGCACTTTATGACCAGCAA 57.715 45.000 0.00 0.00 34.05 3.91
303 304 2.093890 CATGGCACTTTATGACCAGCA 58.906 47.619 0.00 0.00 37.74 4.41
304 305 2.098117 GTCATGGCACTTTATGACCAGC 59.902 50.000 6.87 0.00 44.56 4.85
319 320 1.153369 CTACCACGGGCAGTCATGG 60.153 63.158 0.00 0.00 38.26 3.66
320 321 1.153369 CCTACCACGGGCAGTCATG 60.153 63.158 0.00 0.00 0.00 3.07
321 322 0.324923 TACCTACCACGGGCAGTCAT 60.325 55.000 0.00 0.00 0.00 3.06
322 323 0.968901 CTACCTACCACGGGCAGTCA 60.969 60.000 0.00 0.00 0.00 3.41
323 324 0.969409 ACTACCTACCACGGGCAGTC 60.969 60.000 0.00 0.00 0.00 3.51
324 325 1.077985 ACTACCTACCACGGGCAGT 59.922 57.895 0.00 0.00 0.00 4.40
325 326 1.515954 CACTACCTACCACGGGCAG 59.484 63.158 0.00 0.00 0.00 4.85
326 327 2.652095 GCACTACCTACCACGGGCA 61.652 63.158 0.00 0.00 0.00 5.36
327 328 2.186125 GCACTACCTACCACGGGC 59.814 66.667 0.00 0.00 0.00 6.13
328 329 2.493030 CGCACTACCTACCACGGG 59.507 66.667 0.00 0.00 0.00 5.28
329 330 2.202703 GCGCACTACCTACCACGG 60.203 66.667 0.30 0.00 0.00 4.94
330 331 2.202703 GGCGCACTACCTACCACG 60.203 66.667 10.83 0.00 0.00 4.94
331 332 2.202703 CGGCGCACTACCTACCAC 60.203 66.667 10.83 0.00 0.00 4.16
332 333 2.361483 TCGGCGCACTACCTACCA 60.361 61.111 10.83 0.00 0.00 3.25
333 334 1.941999 AACTCGGCGCACTACCTACC 61.942 60.000 10.83 0.00 0.00 3.18
334 335 0.108945 AAACTCGGCGCACTACCTAC 60.109 55.000 10.83 0.00 0.00 3.18
335 336 0.171903 GAAACTCGGCGCACTACCTA 59.828 55.000 10.83 0.00 0.00 3.08
336 337 1.080025 GAAACTCGGCGCACTACCT 60.080 57.895 10.83 0.00 0.00 3.08
337 338 0.947180 TTGAAACTCGGCGCACTACC 60.947 55.000 10.83 0.00 0.00 3.18
338 339 0.163146 GTTGAAACTCGGCGCACTAC 59.837 55.000 10.83 0.00 0.00 2.73
339 340 0.947180 GGTTGAAACTCGGCGCACTA 60.947 55.000 10.83 0.00 0.00 2.74
340 341 2.251642 GGTTGAAACTCGGCGCACT 61.252 57.895 10.83 0.00 0.00 4.40
341 342 2.251371 GGTTGAAACTCGGCGCAC 59.749 61.111 10.83 0.00 0.00 5.34
342 343 2.203084 TGGTTGAAACTCGGCGCA 60.203 55.556 10.83 0.00 0.00 6.09
343 344 2.251371 GTGGTTGAAACTCGGCGC 59.749 61.111 0.00 0.00 0.00 6.53
344 345 2.549282 CGTGGTTGAAACTCGGCG 59.451 61.111 0.00 0.00 0.00 6.46
345 346 2.251371 GCGTGGTTGAAACTCGGC 59.749 61.111 6.82 0.00 0.00 5.54
346 347 2.943653 GGCGTGGTTGAAACTCGG 59.056 61.111 6.82 0.00 0.00 4.63
347 348 1.492319 TTCGGCGTGGTTGAAACTCG 61.492 55.000 6.85 0.00 0.00 4.18
348 349 0.658897 TTTCGGCGTGGTTGAAACTC 59.341 50.000 6.85 0.00 0.00 3.01
349 350 0.379316 GTTTCGGCGTGGTTGAAACT 59.621 50.000 6.85 0.00 44.91 2.66
350 351 2.862700 GTTTCGGCGTGGTTGAAAC 58.137 52.632 6.85 5.28 43.02 2.78
351 352 0.099082 GTGTTTCGGCGTGGTTGAAA 59.901 50.000 6.85 0.00 0.00 2.69
352 353 1.716826 GGTGTTTCGGCGTGGTTGAA 61.717 55.000 6.85 0.00 0.00 2.69
353 354 2.181521 GGTGTTTCGGCGTGGTTGA 61.182 57.895 6.85 0.00 0.00 3.18
354 355 2.330041 GGTGTTTCGGCGTGGTTG 59.670 61.111 6.85 0.00 0.00 3.77
355 356 2.903350 GGGTGTTTCGGCGTGGTT 60.903 61.111 6.85 0.00 0.00 3.67
356 357 4.941309 GGGGTGTTTCGGCGTGGT 62.941 66.667 6.85 0.00 0.00 4.16
358 359 3.862394 TACGGGGTGTTTCGGCGTG 62.862 63.158 6.85 0.00 0.00 5.34
359 360 2.453379 AATACGGGGTGTTTCGGCGT 62.453 55.000 6.85 0.00 0.00 5.68
360 361 1.742510 AATACGGGGTGTTTCGGCG 60.743 57.895 0.00 0.00 0.00 6.46
361 362 1.650314 CCAATACGGGGTGTTTCGGC 61.650 60.000 0.00 0.00 0.00 5.54
362 363 0.321830 ACCAATACGGGGTGTTTCGG 60.322 55.000 0.00 0.00 40.22 4.30
363 364 3.236604 ACCAATACGGGGTGTTTCG 57.763 52.632 0.00 0.00 40.22 3.46
371 372 2.483014 TCCAAGAACACCAATACGGG 57.517 50.000 0.00 0.00 40.22 5.28
372 373 3.605634 TCATCCAAGAACACCAATACGG 58.394 45.455 0.00 0.00 42.50 4.02
373 374 3.063997 GCTCATCCAAGAACACCAATACG 59.936 47.826 0.00 0.00 0.00 3.06
374 375 4.009675 TGCTCATCCAAGAACACCAATAC 58.990 43.478 0.00 0.00 0.00 1.89
375 376 4.299586 TGCTCATCCAAGAACACCAATA 57.700 40.909 0.00 0.00 0.00 1.90
376 377 3.159213 TGCTCATCCAAGAACACCAAT 57.841 42.857 0.00 0.00 0.00 3.16
377 378 2.655090 TGCTCATCCAAGAACACCAA 57.345 45.000 0.00 0.00 0.00 3.67
378 379 2.439409 CATGCTCATCCAAGAACACCA 58.561 47.619 0.00 0.00 0.00 4.17
379 380 1.133790 GCATGCTCATCCAAGAACACC 59.866 52.381 11.37 0.00 0.00 4.16
380 381 1.814394 TGCATGCTCATCCAAGAACAC 59.186 47.619 20.33 0.00 0.00 3.32
381 382 2.203470 TGCATGCTCATCCAAGAACA 57.797 45.000 20.33 0.00 0.00 3.18
382 383 3.192001 TCTTTGCATGCTCATCCAAGAAC 59.808 43.478 20.33 0.00 0.00 3.01
383 384 3.423749 TCTTTGCATGCTCATCCAAGAA 58.576 40.909 20.33 0.00 0.00 2.52
384 385 3.076079 TCTTTGCATGCTCATCCAAGA 57.924 42.857 20.33 12.74 0.00 3.02
385 386 3.192844 ACTTCTTTGCATGCTCATCCAAG 59.807 43.478 20.33 14.49 0.00 3.61
386 387 3.057104 CACTTCTTTGCATGCTCATCCAA 60.057 43.478 20.33 0.00 0.00 3.53
387 388 2.490509 CACTTCTTTGCATGCTCATCCA 59.509 45.455 20.33 0.00 0.00 3.41
388 389 2.159282 CCACTTCTTTGCATGCTCATCC 60.159 50.000 20.33 0.00 0.00 3.51
389 390 2.734492 GCCACTTCTTTGCATGCTCATC 60.734 50.000 20.33 0.00 0.00 2.92
390 391 1.203994 GCCACTTCTTTGCATGCTCAT 59.796 47.619 20.33 0.00 0.00 2.90
391 392 0.599558 GCCACTTCTTTGCATGCTCA 59.400 50.000 20.33 2.20 0.00 4.26
392 393 0.886563 AGCCACTTCTTTGCATGCTC 59.113 50.000 20.33 0.00 0.00 4.26
393 394 1.000506 CAAGCCACTTCTTTGCATGCT 59.999 47.619 20.33 0.00 0.00 3.79
394 395 1.269936 ACAAGCCACTTCTTTGCATGC 60.270 47.619 11.82 11.82 0.00 4.06
395 396 2.034939 TCACAAGCCACTTCTTTGCATG 59.965 45.455 0.00 0.00 0.00 4.06
396 397 2.309613 TCACAAGCCACTTCTTTGCAT 58.690 42.857 0.00 0.00 0.00 3.96
397 398 1.761449 TCACAAGCCACTTCTTTGCA 58.239 45.000 0.00 0.00 0.00 4.08
398 399 2.358898 TCTTCACAAGCCACTTCTTTGC 59.641 45.455 0.00 0.00 0.00 3.68
399 400 4.637483 TTCTTCACAAGCCACTTCTTTG 57.363 40.909 0.00 0.00 0.00 2.77
400 401 5.659440 TTTTCTTCACAAGCCACTTCTTT 57.341 34.783 0.00 0.00 0.00 2.52
401 402 5.659440 TTTTTCTTCACAAGCCACTTCTT 57.341 34.783 0.00 0.00 0.00 2.52
422 423 7.040473 AGTACCTATCGTCGATGATCTTTTT 57.960 36.000 23.05 7.68 0.00 1.94
423 424 6.636562 AGTACCTATCGTCGATGATCTTTT 57.363 37.500 23.05 9.29 0.00 2.27
424 425 7.606839 TCATAGTACCTATCGTCGATGATCTTT 59.393 37.037 23.05 10.93 0.00 2.52
425 426 7.104290 TCATAGTACCTATCGTCGATGATCTT 58.896 38.462 23.05 11.26 0.00 2.40
426 427 6.641474 TCATAGTACCTATCGTCGATGATCT 58.359 40.000 23.05 15.48 0.00 2.75
427 428 6.757478 TCTCATAGTACCTATCGTCGATGATC 59.243 42.308 23.05 9.06 0.00 2.92
428 429 6.535865 GTCTCATAGTACCTATCGTCGATGAT 59.464 42.308 22.95 22.95 0.00 2.45
429 430 5.868258 GTCTCATAGTACCTATCGTCGATGA 59.132 44.000 17.98 10.29 0.00 2.92
430 431 5.220247 CGTCTCATAGTACCTATCGTCGATG 60.220 48.000 17.98 4.54 0.00 3.84
431 432 4.863689 CGTCTCATAGTACCTATCGTCGAT 59.136 45.833 13.16 13.16 0.00 3.59
432 433 4.233005 CGTCTCATAGTACCTATCGTCGA 58.767 47.826 0.00 0.00 0.00 4.20
433 434 3.367327 CCGTCTCATAGTACCTATCGTCG 59.633 52.174 0.00 0.00 0.00 5.12
434 435 3.124976 GCCGTCTCATAGTACCTATCGTC 59.875 52.174 0.00 0.00 0.00 4.20
435 436 3.072944 GCCGTCTCATAGTACCTATCGT 58.927 50.000 0.00 0.00 0.00 3.73
436 437 3.072211 TGCCGTCTCATAGTACCTATCG 58.928 50.000 0.00 0.00 0.00 2.92
437 438 4.082679 CCTTGCCGTCTCATAGTACCTATC 60.083 50.000 0.00 0.00 0.00 2.08
438 439 3.827302 CCTTGCCGTCTCATAGTACCTAT 59.173 47.826 0.00 0.00 0.00 2.57
439 440 3.220110 CCTTGCCGTCTCATAGTACCTA 58.780 50.000 0.00 0.00 0.00 3.08
440 441 2.032620 CCTTGCCGTCTCATAGTACCT 58.967 52.381 0.00 0.00 0.00 3.08
441 442 1.755380 ACCTTGCCGTCTCATAGTACC 59.245 52.381 0.00 0.00 0.00 3.34
442 443 2.541178 CGACCTTGCCGTCTCATAGTAC 60.541 54.545 0.00 0.00 0.00 2.73
443 444 1.674441 CGACCTTGCCGTCTCATAGTA 59.326 52.381 0.00 0.00 0.00 1.82
444 445 0.456221 CGACCTTGCCGTCTCATAGT 59.544 55.000 0.00 0.00 0.00 2.12
445 446 0.249073 CCGACCTTGCCGTCTCATAG 60.249 60.000 0.00 0.00 0.00 2.23
446 447 1.813859 CCGACCTTGCCGTCTCATA 59.186 57.895 0.00 0.00 0.00 2.15
447 448 2.579201 CCGACCTTGCCGTCTCAT 59.421 61.111 0.00 0.00 0.00 2.90
448 449 4.373116 GCCGACCTTGCCGTCTCA 62.373 66.667 0.00 0.00 0.00 3.27
449 450 2.017559 ATAGCCGACCTTGCCGTCTC 62.018 60.000 0.00 0.00 0.00 3.36
450 451 2.058595 ATAGCCGACCTTGCCGTCT 61.059 57.895 0.00 0.00 0.00 4.18
451 452 1.883084 CATAGCCGACCTTGCCGTC 60.883 63.158 0.00 0.00 0.00 4.79
452 453 2.186903 CATAGCCGACCTTGCCGT 59.813 61.111 0.00 0.00 0.00 5.68
453 454 2.588877 CCATAGCCGACCTTGCCG 60.589 66.667 0.00 0.00 0.00 5.69
454 455 2.902343 GCCATAGCCGACCTTGCC 60.902 66.667 0.00 0.00 0.00 4.52
455 456 2.124736 TGCCATAGCCGACCTTGC 60.125 61.111 0.00 0.00 38.69 4.01
456 457 4.131376 CTGCCATAGCCGACCTTG 57.869 61.111 0.00 0.00 38.69 3.61
465 466 1.268386 CGTGCTTCATTGCTGCCATAG 60.268 52.381 0.00 0.00 0.00 2.23
466 467 0.734309 CGTGCTTCATTGCTGCCATA 59.266 50.000 0.00 0.00 0.00 2.74
467 468 1.509463 CGTGCTTCATTGCTGCCAT 59.491 52.632 0.00 0.00 0.00 4.40
468 469 2.956194 CGTGCTTCATTGCTGCCA 59.044 55.556 0.00 0.00 0.00 4.92
469 470 2.505557 GCGTGCTTCATTGCTGCC 60.506 61.111 0.00 0.00 0.00 4.85
470 471 2.872925 CGCGTGCTTCATTGCTGC 60.873 61.111 0.00 0.00 33.83 5.25
471 472 2.202388 CCGCGTGCTTCATTGCTG 60.202 61.111 4.92 0.00 0.00 4.41
472 473 4.107051 GCCGCGTGCTTCATTGCT 62.107 61.111 4.92 0.00 36.87 3.91
473 474 3.895102 TTGCCGCGTGCTTCATTGC 62.895 57.895 18.14 6.23 42.00 3.56
474 475 1.798725 CTTGCCGCGTGCTTCATTG 60.799 57.895 18.14 0.00 42.00 2.82
475 476 2.562912 CTTGCCGCGTGCTTCATT 59.437 55.556 18.14 0.00 42.00 2.57
476 477 3.434319 CCTTGCCGCGTGCTTCAT 61.434 61.111 18.14 0.00 42.00 2.57
477 478 3.899981 ATCCTTGCCGCGTGCTTCA 62.900 57.895 18.14 0.44 42.00 3.02
478 479 3.127533 ATCCTTGCCGCGTGCTTC 61.128 61.111 18.14 0.00 42.00 3.86
479 480 3.434319 CATCCTTGCCGCGTGCTT 61.434 61.111 18.14 0.00 42.00 3.91
489 490 0.952280 CTGCTATGCCTGCATCCTTG 59.048 55.000 8.09 0.00 39.86 3.61
490 491 0.178998 CCTGCTATGCCTGCATCCTT 60.179 55.000 8.09 0.00 39.86 3.36
491 492 1.058428 TCCTGCTATGCCTGCATCCT 61.058 55.000 8.09 0.00 39.86 3.24
492 493 0.605860 CTCCTGCTATGCCTGCATCC 60.606 60.000 8.09 2.09 39.86 3.51
493 494 0.605860 CCTCCTGCTATGCCTGCATC 60.606 60.000 8.09 0.00 39.86 3.91
494 495 1.454976 CCTCCTGCTATGCCTGCAT 59.545 57.895 9.87 9.87 39.86 3.96
495 496 2.749584 CCCTCCTGCTATGCCTGCA 61.750 63.158 0.00 0.00 38.81 4.41
496 497 2.112718 CCCTCCTGCTATGCCTGC 59.887 66.667 0.00 0.00 0.00 4.85
497 498 2.834688 CCCCTCCTGCTATGCCTG 59.165 66.667 0.00 0.00 0.00 4.85
498 499 3.174265 GCCCCTCCTGCTATGCCT 61.174 66.667 0.00 0.00 0.00 4.75
499 500 3.488467 CTGCCCCTCCTGCTATGCC 62.488 68.421 0.00 0.00 0.00 4.40
500 501 2.112718 CTGCCCCTCCTGCTATGC 59.887 66.667 0.00 0.00 0.00 3.14
501 502 2.827129 CCCTGCCCCTCCTGCTATG 61.827 68.421 0.00 0.00 0.00 2.23
502 503 2.449322 CCCTGCCCCTCCTGCTAT 60.449 66.667 0.00 0.00 0.00 2.97
521 522 2.203126 CTCCTCCGCCATCCTTGC 60.203 66.667 0.00 0.00 0.00 4.01
522 523 2.203126 GCTCCTCCGCCATCCTTG 60.203 66.667 0.00 0.00 0.00 3.61
523 524 2.688666 TGCTCCTCCGCCATCCTT 60.689 61.111 0.00 0.00 0.00 3.36
524 525 3.160047 CTGCTCCTCCGCCATCCT 61.160 66.667 0.00 0.00 0.00 3.24
525 526 4.247380 CCTGCTCCTCCGCCATCC 62.247 72.222 0.00 0.00 0.00 3.51
526 527 4.925861 GCCTGCTCCTCCGCCATC 62.926 72.222 0.00 0.00 0.00 3.51
535 536 4.575973 ATCCATGCCGCCTGCTCC 62.576 66.667 0.00 0.00 42.00 4.70
536 537 3.285215 CATCCATGCCGCCTGCTC 61.285 66.667 0.00 0.00 42.00 4.26
537 538 4.889112 CCATCCATGCCGCCTGCT 62.889 66.667 0.00 0.00 42.00 4.24
538 539 4.881440 TCCATCCATGCCGCCTGC 62.881 66.667 0.00 0.00 41.77 4.85
539 540 2.593725 CTCCATCCATGCCGCCTG 60.594 66.667 0.00 0.00 0.00 4.85
540 541 3.092511 ACTCCATCCATGCCGCCT 61.093 61.111 0.00 0.00 0.00 5.52
541 542 2.903855 CACTCCATCCATGCCGCC 60.904 66.667 0.00 0.00 0.00 6.13
542 543 3.589881 GCACTCCATCCATGCCGC 61.590 66.667 0.00 0.00 33.06 6.53
543 544 2.124612 TGCACTCCATCCATGCCG 60.125 61.111 0.00 0.00 38.63 5.69
544 545 1.826921 CCTGCACTCCATCCATGCC 60.827 63.158 0.00 0.00 38.63 4.40
545 546 0.394762 TTCCTGCACTCCATCCATGC 60.395 55.000 0.00 0.00 39.88 4.06
546 547 1.064906 ACTTCCTGCACTCCATCCATG 60.065 52.381 0.00 0.00 0.00 3.66
547 548 1.064906 CACTTCCTGCACTCCATCCAT 60.065 52.381 0.00 0.00 0.00 3.41
548 549 0.325933 CACTTCCTGCACTCCATCCA 59.674 55.000 0.00 0.00 0.00 3.41
549 550 0.615331 TCACTTCCTGCACTCCATCC 59.385 55.000 0.00 0.00 0.00 3.51
550 551 2.559440 GATCACTTCCTGCACTCCATC 58.441 52.381 0.00 0.00 0.00 3.51
551 552 1.211457 GGATCACTTCCTGCACTCCAT 59.789 52.381 0.00 0.00 41.78 3.41
552 553 0.615331 GGATCACTTCCTGCACTCCA 59.385 55.000 0.00 0.00 41.78 3.86
553 554 0.460987 CGGATCACTTCCTGCACTCC 60.461 60.000 0.00 0.00 42.99 3.85
554 555 0.247736 ACGGATCACTTCCTGCACTC 59.752 55.000 0.00 0.00 42.99 3.51
555 556 0.247736 GACGGATCACTTCCTGCACT 59.752 55.000 0.00 0.00 42.99 4.40
556 557 0.037326 TGACGGATCACTTCCTGCAC 60.037 55.000 0.00 0.00 42.99 4.57
557 558 2.361189 TGACGGATCACTTCCTGCA 58.639 52.632 0.00 0.00 42.99 4.41
566 567 2.791927 CTCGAGCGTGACGGATCA 59.208 61.111 7.25 0.00 0.00 2.92
567 568 2.652496 GCTCGAGCGTGACGGATC 60.652 66.667 23.61 0.00 0.00 3.36
568 569 2.284798 AATGCTCGAGCGTGACGGAT 62.285 55.000 31.62 15.17 45.83 4.18
569 570 2.989881 AATGCTCGAGCGTGACGGA 61.990 57.895 31.62 13.39 45.83 4.69
570 571 2.507102 AATGCTCGAGCGTGACGG 60.507 61.111 31.62 0.00 45.83 4.79
571 572 1.142185 ATCAATGCTCGAGCGTGACG 61.142 55.000 33.32 24.29 45.83 4.35
572 573 1.002366 AATCAATGCTCGAGCGTGAC 58.998 50.000 33.32 11.96 45.83 3.67
573 574 1.660607 GAAATCAATGCTCGAGCGTGA 59.339 47.619 32.96 32.96 45.83 4.35
574 575 1.590679 CGAAATCAATGCTCGAGCGTG 60.591 52.381 31.62 28.83 45.83 5.34
575 576 0.647410 CGAAATCAATGCTCGAGCGT 59.353 50.000 30.75 28.61 45.83 5.07
576 577 0.647410 ACGAAATCAATGCTCGAGCG 59.353 50.000 30.75 17.81 45.83 5.03
577 578 2.813779 AACGAAATCAATGCTCGAGC 57.186 45.000 30.42 30.42 42.50 5.03
578 579 3.848019 CCAAAACGAAATCAATGCTCGAG 59.152 43.478 8.45 8.45 36.45 4.04
579 580 3.252215 ACCAAAACGAAATCAATGCTCGA 59.748 39.130 6.30 0.00 36.45 4.04
580 581 3.564511 ACCAAAACGAAATCAATGCTCG 58.435 40.909 0.00 0.00 38.53 5.03
581 582 5.516339 CCATACCAAAACGAAATCAATGCTC 59.484 40.000 0.00 0.00 0.00 4.26
582 583 5.410067 CCATACCAAAACGAAATCAATGCT 58.590 37.500 0.00 0.00 0.00 3.79
583 584 4.032786 GCCATACCAAAACGAAATCAATGC 59.967 41.667 0.00 0.00 0.00 3.56
584 585 4.566360 GGCCATACCAAAACGAAATCAATG 59.434 41.667 0.00 0.00 38.86 2.82
585 586 4.676723 CGGCCATACCAAAACGAAATCAAT 60.677 41.667 2.24 0.00 39.03 2.57
586 587 3.366476 CGGCCATACCAAAACGAAATCAA 60.366 43.478 2.24 0.00 39.03 2.57
587 588 2.162608 CGGCCATACCAAAACGAAATCA 59.837 45.455 2.24 0.00 39.03 2.57
588 589 2.478879 CCGGCCATACCAAAACGAAATC 60.479 50.000 2.24 0.00 39.03 2.17
589 590 1.474879 CCGGCCATACCAAAACGAAAT 59.525 47.619 2.24 0.00 39.03 2.17
590 591 0.882474 CCGGCCATACCAAAACGAAA 59.118 50.000 2.24 0.00 39.03 3.46
591 592 0.036448 TCCGGCCATACCAAAACGAA 59.964 50.000 2.24 0.00 39.03 3.85
592 593 0.253610 ATCCGGCCATACCAAAACGA 59.746 50.000 2.24 0.00 39.03 3.85
593 594 1.099689 AATCCGGCCATACCAAAACG 58.900 50.000 2.24 0.00 39.03 3.60
594 595 1.822371 ACAATCCGGCCATACCAAAAC 59.178 47.619 2.24 0.00 39.03 2.43
595 596 2.223803 ACAATCCGGCCATACCAAAA 57.776 45.000 2.24 0.00 39.03 2.44
596 597 1.821753 CAACAATCCGGCCATACCAAA 59.178 47.619 2.24 0.00 39.03 3.28
597 598 1.004862 TCAACAATCCGGCCATACCAA 59.995 47.619 2.24 0.00 39.03 3.67
598 599 0.621082 TCAACAATCCGGCCATACCA 59.379 50.000 2.24 0.00 39.03 3.25
599 600 1.404035 GTTCAACAATCCGGCCATACC 59.596 52.381 2.24 0.00 0.00 2.73
600 601 2.365582 AGTTCAACAATCCGGCCATAC 58.634 47.619 2.24 0.00 0.00 2.39
601 602 2.799126 AGTTCAACAATCCGGCCATA 57.201 45.000 2.24 0.00 0.00 2.74
602 603 2.799126 TAGTTCAACAATCCGGCCAT 57.201 45.000 2.24 0.00 0.00 4.40
603 604 2.799126 ATAGTTCAACAATCCGGCCA 57.201 45.000 2.24 0.00 0.00 5.36
604 605 5.767816 AATTATAGTTCAACAATCCGGCC 57.232 39.130 0.00 0.00 0.00 6.13
605 606 8.349983 ACATAAATTATAGTTCAACAATCCGGC 58.650 33.333 0.00 0.00 0.00 6.13
622 623 9.900710 ACAAACACGATAAAGCAACATAAATTA 57.099 25.926 0.00 0.00 0.00 1.40
623 624 8.810652 ACAAACACGATAAAGCAACATAAATT 57.189 26.923 0.00 0.00 0.00 1.82
624 625 8.810652 AACAAACACGATAAAGCAACATAAAT 57.189 26.923 0.00 0.00 0.00 1.40
625 626 8.635877 AAACAAACACGATAAAGCAACATAAA 57.364 26.923 0.00 0.00 0.00 1.40
626 627 7.112287 CGAAACAAACACGATAAAGCAACATAA 59.888 33.333 0.00 0.00 0.00 1.90
627 628 6.575572 CGAAACAAACACGATAAAGCAACATA 59.424 34.615 0.00 0.00 0.00 2.29
628 629 5.398122 CGAAACAAACACGATAAAGCAACAT 59.602 36.000 0.00 0.00 0.00 2.71
629 630 4.731000 CGAAACAAACACGATAAAGCAACA 59.269 37.500 0.00 0.00 0.00 3.33
630 631 4.965158 TCGAAACAAACACGATAAAGCAAC 59.035 37.500 0.00 0.00 0.00 4.17
631 632 5.158101 TCGAAACAAACACGATAAAGCAA 57.842 34.783 0.00 0.00 0.00 3.91
632 633 4.797693 TCGAAACAAACACGATAAAGCA 57.202 36.364 0.00 0.00 0.00 3.91
633 634 5.202640 AGTTCGAAACAAACACGATAAAGC 58.797 37.500 0.00 0.00 36.02 3.51
634 635 8.827599 CAATAGTTCGAAACAAACACGATAAAG 58.172 33.333 0.00 0.00 36.02 1.85
635 636 8.549548 TCAATAGTTCGAAACAAACACGATAAA 58.450 29.630 0.00 0.00 36.02 1.40
636 637 8.074474 TCAATAGTTCGAAACAAACACGATAA 57.926 30.769 0.00 0.00 36.02 1.75
637 638 7.640616 TCAATAGTTCGAAACAAACACGATA 57.359 32.000 0.00 0.00 36.02 2.92
638 639 6.533819 TCAATAGTTCGAAACAAACACGAT 57.466 33.333 0.00 0.00 36.02 3.73
639 640 5.970140 TCAATAGTTCGAAACAAACACGA 57.030 34.783 0.00 0.00 0.00 4.35
640 641 8.702408 TTAATCAATAGTTCGAAACAAACACG 57.298 30.769 0.00 0.00 0.00 4.49
665 666 9.950680 GATCATACGATACAAACCATTTCAATT 57.049 29.630 0.00 0.00 29.66 2.32
666 667 8.282592 CGATCATACGATACAAACCATTTCAAT 58.717 33.333 0.00 0.00 35.09 2.57
667 668 7.492994 TCGATCATACGATACAAACCATTTCAA 59.507 33.333 0.00 0.00 37.37 2.69
668 669 6.981559 TCGATCATACGATACAAACCATTTCA 59.018 34.615 0.00 0.00 37.37 2.69
669 670 7.281484 GTCGATCATACGATACAAACCATTTC 58.719 38.462 0.00 0.00 43.93 2.17
670 671 6.074516 CGTCGATCATACGATACAAACCATTT 60.075 38.462 11.16 0.00 43.93 2.32
671 672 5.401376 CGTCGATCATACGATACAAACCATT 59.599 40.000 11.16 0.00 43.93 3.16
672 673 4.915667 CGTCGATCATACGATACAAACCAT 59.084 41.667 11.16 0.00 43.93 3.55
673 674 4.201940 ACGTCGATCATACGATACAAACCA 60.202 41.667 20.73 0.00 43.93 3.67
674 675 4.145928 CACGTCGATCATACGATACAAACC 59.854 45.833 20.73 0.00 43.93 3.27
675 676 4.373717 GCACGTCGATCATACGATACAAAC 60.374 45.833 20.73 2.63 43.93 2.93
676 677 3.727227 GCACGTCGATCATACGATACAAA 59.273 43.478 20.73 0.00 43.93 2.83
677 678 3.242804 TGCACGTCGATCATACGATACAA 60.243 43.478 20.73 3.10 43.93 2.41
678 679 2.288458 TGCACGTCGATCATACGATACA 59.712 45.455 20.73 13.28 43.93 2.29
679 680 2.912366 TGCACGTCGATCATACGATAC 58.088 47.619 20.73 11.40 43.93 2.24
680 681 3.187637 TCATGCACGTCGATCATACGATA 59.812 43.478 20.73 9.14 43.93 2.92
681 682 2.031157 TCATGCACGTCGATCATACGAT 60.031 45.455 20.73 4.96 43.93 3.73
682 683 1.332375 TCATGCACGTCGATCATACGA 59.668 47.619 20.73 0.00 42.90 3.43
683 684 1.753956 TCATGCACGTCGATCATACG 58.246 50.000 14.21 14.21 45.64 3.06
684 685 3.983988 AGATTCATGCACGTCGATCATAC 59.016 43.478 0.00 0.00 0.00 2.39
685 686 4.243007 AGATTCATGCACGTCGATCATA 57.757 40.909 0.00 0.00 0.00 2.15
686 687 3.103447 AGATTCATGCACGTCGATCAT 57.897 42.857 0.00 0.00 0.00 2.45
687 688 2.584492 AGATTCATGCACGTCGATCA 57.416 45.000 0.00 0.00 0.00 2.92
688 689 4.290969 TCTTAGATTCATGCACGTCGATC 58.709 43.478 0.00 0.00 0.00 3.69
689 690 4.307443 TCTTAGATTCATGCACGTCGAT 57.693 40.909 0.00 0.00 0.00 3.59
690 691 3.775661 TCTTAGATTCATGCACGTCGA 57.224 42.857 0.00 0.00 0.00 4.20
691 692 4.084849 GGATTCTTAGATTCATGCACGTCG 60.085 45.833 6.48 0.00 0.00 5.12
692 693 4.811024 TGGATTCTTAGATTCATGCACGTC 59.189 41.667 6.48 0.00 0.00 4.34
693 694 4.572389 GTGGATTCTTAGATTCATGCACGT 59.428 41.667 6.48 0.00 29.78 4.49
694 695 4.571984 TGTGGATTCTTAGATTCATGCACG 59.428 41.667 10.76 0.00 39.96 5.34
695 696 6.630444 ATGTGGATTCTTAGATTCATGCAC 57.370 37.500 9.20 9.20 38.19 4.57
696 697 7.649533 AAATGTGGATTCTTAGATTCATGCA 57.350 32.000 6.48 0.00 0.00 3.96
697 698 8.623903 TGTAAATGTGGATTCTTAGATTCATGC 58.376 33.333 6.48 0.00 0.00 4.06
717 718 6.691754 TGTCGCATATCCACATTTGTAAAT 57.308 33.333 0.00 0.00 0.00 1.40
718 719 6.502136 TTGTCGCATATCCACATTTGTAAA 57.498 33.333 0.00 0.00 0.00 2.01
719 720 6.238621 GGATTGTCGCATATCCACATTTGTAA 60.239 38.462 0.00 0.00 40.08 2.41
720 721 5.238432 GGATTGTCGCATATCCACATTTGTA 59.762 40.000 0.00 0.00 40.08 2.41
721 722 4.036734 GGATTGTCGCATATCCACATTTGT 59.963 41.667 0.00 0.00 40.08 2.83
722 723 4.036616 TGGATTGTCGCATATCCACATTTG 59.963 41.667 7.76 0.00 44.04 2.32
723 724 4.206375 TGGATTGTCGCATATCCACATTT 58.794 39.130 7.76 0.00 44.04 2.32
724 725 3.819368 TGGATTGTCGCATATCCACATT 58.181 40.909 7.76 0.00 44.04 2.71
725 726 3.490439 TGGATTGTCGCATATCCACAT 57.510 42.857 7.76 0.00 44.04 3.21
726 727 2.998316 TGGATTGTCGCATATCCACA 57.002 45.000 7.76 0.00 44.04 4.17
728 729 4.644234 ACATTTTGGATTGTCGCATATCCA 59.356 37.500 7.76 7.76 46.48 3.41
729 730 5.186996 ACATTTTGGATTGTCGCATATCC 57.813 39.130 0.00 0.00 40.62 2.59
730 731 8.503196 TGTATACATTTTGGATTGTCGCATATC 58.497 33.333 0.08 0.00 0.00 1.63
731 732 8.389779 TGTATACATTTTGGATTGTCGCATAT 57.610 30.769 0.08 0.00 0.00 1.78
732 733 7.713073 TCTGTATACATTTTGGATTGTCGCATA 59.287 33.333 5.91 0.00 0.00 3.14
733 734 6.542005 TCTGTATACATTTTGGATTGTCGCAT 59.458 34.615 5.91 0.00 0.00 4.73
734 735 5.877564 TCTGTATACATTTTGGATTGTCGCA 59.122 36.000 5.91 0.00 0.00 5.10
735 736 6.257849 TCTCTGTATACATTTTGGATTGTCGC 59.742 38.462 5.91 0.00 0.00 5.19
736 737 7.517417 GCTCTCTGTATACATTTTGGATTGTCG 60.517 40.741 5.91 0.00 0.00 4.35
737 738 7.280876 TGCTCTCTGTATACATTTTGGATTGTC 59.719 37.037 5.91 0.00 0.00 3.18
738 739 7.112122 TGCTCTCTGTATACATTTTGGATTGT 58.888 34.615 5.91 0.00 0.00 2.71
739 740 7.558161 TGCTCTCTGTATACATTTTGGATTG 57.442 36.000 5.91 0.00 0.00 2.67
740 741 7.994911 TCATGCTCTCTGTATACATTTTGGATT 59.005 33.333 5.91 0.00 0.00 3.01
741 742 7.512130 TCATGCTCTCTGTATACATTTTGGAT 58.488 34.615 5.91 2.19 0.00 3.41
742 743 6.888105 TCATGCTCTCTGTATACATTTTGGA 58.112 36.000 5.91 0.00 0.00 3.53
743 744 7.741027 ATCATGCTCTCTGTATACATTTTGG 57.259 36.000 5.91 0.00 0.00 3.28
744 745 9.447040 CAAATCATGCTCTCTGTATACATTTTG 57.553 33.333 5.91 0.00 0.00 2.44
762 763 5.361135 TCTACACACACTTGCAAATCATG 57.639 39.130 0.00 0.00 0.00 3.07
763 764 5.620654 GCATCTACACACACTTGCAAATCAT 60.621 40.000 0.00 0.00 0.00 2.45
764 765 4.320421 GCATCTACACACACTTGCAAATCA 60.320 41.667 0.00 0.00 0.00 2.57
765 766 4.083110 AGCATCTACACACACTTGCAAATC 60.083 41.667 0.00 0.00 32.66 2.17
766 767 3.822735 AGCATCTACACACACTTGCAAAT 59.177 39.130 0.00 0.00 32.66 2.32
767 768 3.213506 AGCATCTACACACACTTGCAAA 58.786 40.909 0.00 0.00 32.66 3.68
768 769 2.849942 AGCATCTACACACACTTGCAA 58.150 42.857 0.00 0.00 32.66 4.08
769 770 2.549064 AGCATCTACACACACTTGCA 57.451 45.000 0.00 0.00 32.66 4.08
770 771 3.372206 CCTAAGCATCTACACACACTTGC 59.628 47.826 0.00 0.00 0.00 4.01
771 772 3.935203 CCCTAAGCATCTACACACACTTG 59.065 47.826 0.00 0.00 0.00 3.16
772 773 3.055094 CCCCTAAGCATCTACACACACTT 60.055 47.826 0.00 0.00 0.00 3.16
773 774 2.501723 CCCCTAAGCATCTACACACACT 59.498 50.000 0.00 0.00 0.00 3.55
774 775 2.420129 CCCCCTAAGCATCTACACACAC 60.420 54.545 0.00 0.00 0.00 3.82
775 776 1.837439 CCCCCTAAGCATCTACACACA 59.163 52.381 0.00 0.00 0.00 3.72
776 777 1.475213 GCCCCCTAAGCATCTACACAC 60.475 57.143 0.00 0.00 0.00 3.82
777 778 0.837272 GCCCCCTAAGCATCTACACA 59.163 55.000 0.00 0.00 0.00 3.72
778 779 0.108774 GGCCCCCTAAGCATCTACAC 59.891 60.000 0.00 0.00 0.00 2.90
779 780 0.327095 TGGCCCCCTAAGCATCTACA 60.327 55.000 0.00 0.00 0.00 2.74
780 781 0.843984 TTGGCCCCCTAAGCATCTAC 59.156 55.000 0.00 0.00 0.00 2.59
781 782 0.843984 GTTGGCCCCCTAAGCATCTA 59.156 55.000 0.00 0.00 0.00 1.98
782 783 1.615262 GTTGGCCCCCTAAGCATCT 59.385 57.895 0.00 0.00 0.00 2.90
783 784 1.455773 GGTTGGCCCCCTAAGCATC 60.456 63.158 0.00 0.00 0.00 3.91
784 785 2.689813 GGTTGGCCCCCTAAGCAT 59.310 61.111 0.00 0.00 0.00 3.79
794 795 2.753884 GCCTAGTAGGGGGTTGGCC 61.754 68.421 18.13 0.00 35.37 5.36
795 796 2.916661 GCCTAGTAGGGGGTTGGC 59.083 66.667 18.13 0.00 35.37 4.52
796 797 3.227250 CGCCTAGTAGGGGGTTGG 58.773 66.667 22.66 0.00 43.90 3.77
803 804 1.742768 CTCTTGCCCGCCTAGTAGG 59.257 63.158 12.27 12.27 38.80 3.18
804 805 1.742768 CCTCTTGCCCGCCTAGTAG 59.257 63.158 0.00 0.00 0.00 2.57
889 890 2.836154 GTGAGGGGACAAGTGGCA 59.164 61.111 0.00 0.00 0.00 4.92
968 973 3.601685 GGTTGGTTGGTGCCACGG 61.602 66.667 0.00 0.00 38.42 4.94
969 974 3.959975 CGGTTGGTTGGTGCCACG 61.960 66.667 0.00 0.00 38.42 4.94
970 975 4.279043 GCGGTTGGTTGGTGCCAC 62.279 66.667 0.00 0.00 38.42 5.01
1182 1196 1.002624 GAGGTGGTGGCGGATGAAA 60.003 57.895 0.00 0.00 0.00 2.69
1261 1275 6.046593 CACTACACAGTAGAGGAGAGTCTAG 58.953 48.000 10.87 0.00 32.21 2.43
1271 1285 5.960113 AGCATCTTTCACTACACAGTAGAG 58.040 41.667 10.87 3.52 32.21 2.43
1277 1291 2.959516 CGGAGCATCTTTCACTACACA 58.040 47.619 0.00 0.00 33.73 3.72
1348 1362 1.604604 TTTCCTTCCCGAAGCACAAG 58.395 50.000 0.00 0.00 37.11 3.16
1363 1377 5.629435 CAGGAGCTCGTTTTAAAACATTTCC 59.371 40.000 26.24 23.48 38.81 3.13
1373 1387 0.669318 CGCCACAGGAGCTCGTTTTA 60.669 55.000 6.10 0.00 0.00 1.52
1384 1398 1.140589 CTAGCTGAGACGCCACAGG 59.859 63.158 0.00 0.00 35.05 4.00
1401 1415 6.619801 ACAACTTCGAAACTAAATTCAGCT 57.380 33.333 0.00 0.00 0.00 4.24
1440 1454 6.674694 TTTCCAAATTGGTCAAACAACATG 57.325 33.333 12.28 0.00 39.03 3.21
1632 1646 0.601057 AATGCCCAAAGTACAACGCC 59.399 50.000 0.00 0.00 0.00 5.68
1644 1658 1.894466 CATGTCCTTTGTGAATGCCCA 59.106 47.619 0.00 0.00 0.00 5.36
1674 1800 9.555727 ACTCTAACAAAAGTAGAAATGTTGCTA 57.444 29.630 0.00 0.00 36.71 3.49
1821 1952 6.901615 TCCATTAGATACAGAAAAGGGGAA 57.098 37.500 0.00 0.00 0.00 3.97
1888 2019 4.040584 GGATCAGGGTAGACATAAGGGAAC 59.959 50.000 0.00 0.00 0.00 3.62
2092 2223 6.092670 CCTGGTTCAAGTACACATCTGTATTG 59.907 42.308 0.00 0.00 35.28 1.90
2190 2321 8.370940 CCAAGAGATCATTAGCTACCTTTGATA 58.629 37.037 0.00 0.00 0.00 2.15
2299 2431 3.498777 GTCTTGGGACTACAGCAAAGAAC 59.501 47.826 0.00 0.00 39.24 3.01
2443 2575 7.908230 ACAATAAGCAAACAAATTGACACAAG 58.092 30.769 0.00 0.00 41.85 3.16
2445 2577 7.547019 TGAACAATAAGCAAACAAATTGACACA 59.453 29.630 0.00 0.00 41.85 3.72
2657 2794 1.280746 CACACCTGCTCGTTTGCTG 59.719 57.895 0.00 0.00 0.00 4.41
2705 2842 9.941664 GATTCTTCATAACACATAACCTTCATG 57.058 33.333 0.00 0.00 0.00 3.07
2769 2906 1.066430 CACGAAGCCCAGCTAAACCTA 60.066 52.381 0.00 0.00 38.25 3.08
3000 3138 3.549299 AGCAGATTTTTCACGCTCTTG 57.451 42.857 0.00 0.00 0.00 3.02
3257 3395 8.470002 TGATCTCGAATACAGATAACCCATATG 58.530 37.037 0.00 0.00 30.30 1.78
3273 3411 6.286758 AGTGTGAATAGCAATGATCTCGAAT 58.713 36.000 0.00 0.00 0.00 3.34
3340 3479 6.956299 ATTCAAGTGAATAAAGTTGCATGC 57.044 33.333 11.82 11.82 42.48 4.06
3365 3504 5.659440 TCCTCCTGCAAATATTTTTCACC 57.341 39.130 0.00 0.00 0.00 4.02
3412 3551 0.242825 CCTTCTTGTCGTAGTGGCGA 59.757 55.000 0.00 0.00 38.68 5.54
3528 3667 5.122239 TCACTGCTTCCATCAAAGTAAATCG 59.878 40.000 0.00 0.00 0.00 3.34
3711 3851 2.289444 TGGTTTGGACTACAGCACTAGC 60.289 50.000 0.00 0.00 42.56 3.42
3724 3864 6.152661 CAGAGTTTATGGCTAAATGGTTTGGA 59.847 38.462 0.00 0.00 0.00 3.53
3725 3865 6.071391 ACAGAGTTTATGGCTAAATGGTTTGG 60.071 38.462 0.00 0.00 0.00 3.28
3727 3867 7.539034 AACAGAGTTTATGGCTAAATGGTTT 57.461 32.000 0.00 0.00 0.00 3.27
3805 3946 4.458295 CCAGACAGAAAGAAGCAACATCAT 59.542 41.667 0.00 0.00 0.00 2.45
3808 3949 3.152341 CCCAGACAGAAAGAAGCAACAT 58.848 45.455 0.00 0.00 0.00 2.71
3824 3966 6.874278 AGCAAGTATATATGTATGCCCAGA 57.126 37.500 12.20 0.00 34.44 3.86
3858 4000 7.362401 CCATAGAACCTTCAACTTTCCAATGAG 60.362 40.741 0.00 0.00 0.00 2.90
3863 4005 5.070001 CACCATAGAACCTTCAACTTTCCA 58.930 41.667 0.00 0.00 0.00 3.53
3931 4073 8.125448 GCTCCTCATGATATTGTACTGAAAAAC 58.875 37.037 0.00 0.00 0.00 2.43
4011 4165 6.018262 TGTCCTTCACTGTATTTCGTTTGAAG 60.018 38.462 0.00 0.00 39.67 3.02
4060 4216 4.847198 TCATTTGCTATCAGCTTCCTTCA 58.153 39.130 0.00 0.00 42.97 3.02
4061 4217 5.824904 TTCATTTGCTATCAGCTTCCTTC 57.175 39.130 0.00 0.00 42.97 3.46
4142 4300 1.904287 TAAAGATGCTTGGCCGTTGT 58.096 45.000 0.00 0.00 0.00 3.32
4193 4352 2.594592 ACGCTTGCACCAAGTCCC 60.595 61.111 6.80 0.00 42.77 4.46
4363 4523 3.181491 CCATGGCTAACCGGTAAACAATG 60.181 47.826 8.00 9.27 39.70 2.82
4422 4603 2.269241 GGCCAGGTCAGTAGCACC 59.731 66.667 0.00 0.00 0.00 5.01
4427 4608 1.379443 ATCGACGGCCAGGTCAGTA 60.379 57.895 2.24 0.00 36.73 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.