Multiple sequence alignment - TraesCS6A01G273300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G273300 chr6A 100.000 6193 0 0 1 6193 499650327 499656519 0.000000e+00 11437.0
1 TraesCS6A01G273300 chr6A 93.531 572 34 3 5176 5746 577872976 577872407 0.000000e+00 848.0
2 TraesCS6A01G273300 chr6A 93.913 345 18 2 5850 6193 577872409 577872067 9.200000e-143 518.0
3 TraesCS6A01G273300 chr6D 92.764 4367 174 54 904 5176 357573299 357577617 0.000000e+00 6183.0
4 TraesCS6A01G273300 chr6D 84.746 295 29 7 566 851 357572988 357573275 1.310000e-71 281.0
5 TraesCS6A01G273300 chr6D 88.333 60 6 1 517 575 460871022 460871081 3.100000e-08 71.3
6 TraesCS6A01G273300 chr6B 92.459 2599 109 25 958 3509 539173136 539175694 0.000000e+00 3633.0
7 TraesCS6A01G273300 chr6B 94.415 1683 62 17 3509 5176 539175743 539177408 0.000000e+00 2558.0
8 TraesCS6A01G273300 chr6B 85.333 300 27 8 566 856 539172540 539172831 1.690000e-75 294.0
9 TraesCS6A01G273300 chr7B 98.433 1021 15 1 5174 6193 735979513 735980533 0.000000e+00 1796.0
10 TraesCS6A01G273300 chr7B 86.047 86 8 4 493 575 85134866 85134782 8.550000e-14 89.8
11 TraesCS6A01G273300 chr2A 93.654 583 36 1 5165 5746 711942899 711943481 0.000000e+00 870.0
12 TraesCS6A01G273300 chr2A 91.738 581 44 3 5167 5746 161824909 161824332 0.000000e+00 804.0
13 TraesCS6A01G273300 chr2A 94.767 344 17 1 5850 6193 161824334 161823992 9.140000e-148 534.0
14 TraesCS6A01G273300 chr2A 97.321 112 3 0 5745 5856 114498832 114498721 2.280000e-44 191.0
15 TraesCS6A01G273300 chr2A 85.321 109 11 4 135 238 84947229 84947337 2.360000e-19 108.0
16 TraesCS6A01G273300 chr2A 88.000 75 8 1 493 567 119299308 119299235 3.080000e-13 87.9
17 TraesCS6A01G273300 chr2A 91.935 62 5 0 508 569 749096608 749096547 3.080000e-13 87.9
18 TraesCS6A01G273300 chr4A 93.380 574 36 2 5174 5746 684918484 684919056 0.000000e+00 848.0
19 TraesCS6A01G273300 chr4A 94.186 344 20 0 5850 6193 684919054 684919397 5.500000e-145 525.0
20 TraesCS6A01G273300 chr4A 93.895 344 21 0 5850 6193 640995072 640994729 2.560000e-143 520.0
21 TraesCS6A01G273300 chr4A 86.765 68 8 1 517 583 556761846 556761913 2.390000e-09 75.0
22 TraesCS6A01G273300 chr4A 85.714 70 9 1 517 586 707687151 707687083 8.610000e-09 73.1
23 TraesCS6A01G273300 chr4A 84.286 70 10 1 517 586 707658191 707658123 4.010000e-07 67.6
24 TraesCS6A01G273300 chr1A 92.696 575 38 4 5171 5744 549758860 549759431 0.000000e+00 826.0
25 TraesCS6A01G273300 chr1A 91.840 576 45 2 5172 5746 510310090 510310664 0.000000e+00 802.0
26 TraesCS6A01G273300 chr1A 94.444 342 18 1 5852 6193 549759433 549759773 5.500000e-145 525.0
27 TraesCS6A01G273300 chr5A 92.348 575 41 2 5173 5746 374920122 374919550 0.000000e+00 815.0
28 TraesCS6A01G273300 chr5A 91.304 575 45 4 5173 5746 206732118 206732688 0.000000e+00 780.0
29 TraesCS6A01G273300 chr5A 94.253 348 16 1 5850 6193 206732686 206733033 4.250000e-146 529.0
30 TraesCS6A01G273300 chr5A 93.931 346 17 3 5850 6193 596575938 596576281 2.560000e-143 520.0
31 TraesCS6A01G273300 chr5A 100.000 108 0 0 5745 5852 585213421 585213314 3.790000e-47 200.0
32 TraesCS6A01G273300 chr5A 93.103 58 3 1 512 568 569179261 569179318 3.980000e-12 84.2
33 TraesCS6A01G273300 chr5A 88.889 45 3 2 476 519 408191535 408191578 3.000000e-03 54.7
34 TraesCS6A01G273300 chr1D 93.623 345 21 1 5850 6193 419292358 419292014 1.190000e-141 514.0
35 TraesCS6A01G273300 chr1D 94.737 38 1 1 482 519 302880693 302880657 2.410000e-04 58.4
36 TraesCS6A01G273300 chr3A 84.836 244 31 6 110 350 634711806 634711566 2.230000e-59 241.0
37 TraesCS6A01G273300 chr3A 99.074 108 1 0 5745 5852 46996315 46996208 1.760000e-45 195.0
38 TraesCS6A01G273300 chr3A 96.491 114 4 0 5745 5858 697472448 697472335 8.200000e-44 189.0
39 TraesCS6A01G273300 chr3A 80.083 241 39 7 110 348 726102990 726102757 2.970000e-38 171.0
40 TraesCS6A01G273300 chr3A 92.045 88 6 1 110 196 737294881 737294794 8.430000e-24 122.0
41 TraesCS6A01G273300 chr3A 87.013 77 6 3 518 594 705268357 705268285 3.980000e-12 84.2
42 TraesCS6A01G273300 chr3A 83.824 68 11 0 517 584 638067508 638067575 1.440000e-06 65.8
43 TraesCS6A01G273300 chr7A 100.000 110 0 0 5743 5852 694063906 694064015 2.930000e-48 204.0
44 TraesCS6A01G273300 chr7A 99.115 113 0 1 5745 5857 277729202 277729313 1.050000e-47 202.0
45 TraesCS6A01G273300 chr7A 79.812 213 34 8 148 355 636905629 636905421 5.000000e-31 147.0
46 TraesCS6A01G273300 chr7A 97.059 34 1 0 185 218 674095707 674095674 2.410000e-04 58.4
47 TraesCS6A01G273300 chr2B 94.215 121 6 1 5743 5863 783405514 783405633 3.810000e-42 183.0
48 TraesCS6A01G273300 chr2B 84.848 66 10 0 517 582 71888233 71888168 4.010000e-07 67.6
49 TraesCS6A01G273300 chr5B 80.328 244 45 3 111 352 420371355 420371597 1.370000e-41 182.0
50 TraesCS6A01G273300 chr3B 92.063 126 9 1 5745 5869 302368595 302368720 6.380000e-40 176.0
51 TraesCS6A01G273300 chr3B 87.692 65 7 1 291 354 473684608 473684672 2.390000e-09 75.0
52 TraesCS6A01G273300 chr2D 78.641 206 40 4 132 335 19629496 19629699 3.890000e-27 134.0
53 TraesCS6A01G273300 chr2D 86.885 61 8 0 517 577 24344516 24344576 1.110000e-07 69.4
54 TraesCS6A01G273300 chr2D 92.683 41 2 1 489 529 519307232 519307193 2.410000e-04 58.4
55 TraesCS6A01G273300 chr5D 96.610 59 2 0 517 575 54934557 54934615 1.420000e-16 99.0
56 TraesCS6A01G273300 chr5D 88.462 78 4 4 491 568 488344146 488344218 8.550000e-14 89.8
57 TraesCS6A01G273300 chr5D 86.420 81 5 4 493 568 459067326 459067405 3.980000e-12 84.2
58 TraesCS6A01G273300 chr5D 88.525 61 6 1 523 583 500439204 500439145 8.610000e-09 73.1
59 TraesCS6A01G273300 chr5D 91.111 45 2 2 476 519 314421972 314422015 6.700000e-05 60.2
60 TraesCS6A01G273300 chr5D 100.000 31 0 0 321 351 221151301 221151331 2.410000e-04 58.4
61 TraesCS6A01G273300 chr3D 81.609 87 13 2 493 576 449740029 449739943 1.110000e-07 69.4
62 TraesCS6A01G273300 chr3D 86.364 66 5 3 112 174 546708858 546708922 1.110000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G273300 chr6A 499650327 499656519 6192 False 11437.000000 11437 100.000000 1 6193 1 chr6A.!!$F1 6192
1 TraesCS6A01G273300 chr6A 577872067 577872976 909 True 683.000000 848 93.722000 5176 6193 2 chr6A.!!$R1 1017
2 TraesCS6A01G273300 chr6D 357572988 357577617 4629 False 3232.000000 6183 88.755000 566 5176 2 chr6D.!!$F2 4610
3 TraesCS6A01G273300 chr6B 539172540 539177408 4868 False 2161.666667 3633 90.735667 566 5176 3 chr6B.!!$F1 4610
4 TraesCS6A01G273300 chr7B 735979513 735980533 1020 False 1796.000000 1796 98.433000 5174 6193 1 chr7B.!!$F1 1019
5 TraesCS6A01G273300 chr2A 711942899 711943481 582 False 870.000000 870 93.654000 5165 5746 1 chr2A.!!$F2 581
6 TraesCS6A01G273300 chr2A 161823992 161824909 917 True 669.000000 804 93.252500 5167 6193 2 chr2A.!!$R4 1026
7 TraesCS6A01G273300 chr4A 684918484 684919397 913 False 686.500000 848 93.783000 5174 6193 2 chr4A.!!$F2 1019
8 TraesCS6A01G273300 chr1A 510310090 510310664 574 False 802.000000 802 91.840000 5172 5746 1 chr1A.!!$F1 574
9 TraesCS6A01G273300 chr1A 549758860 549759773 913 False 675.500000 826 93.570000 5171 6193 2 chr1A.!!$F2 1022
10 TraesCS6A01G273300 chr5A 374919550 374920122 572 True 815.000000 815 92.348000 5173 5746 1 chr5A.!!$R1 573
11 TraesCS6A01G273300 chr5A 206732118 206733033 915 False 654.500000 780 92.778500 5173 6193 2 chr5A.!!$F4 1020

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
504 505 0.039911 AAGAGTGCTACTCCCTCCGT 59.960 55.000 11.24 0.00 46.18 4.69 F
1353 1659 0.394488 GCTACTTCCTTTGGGAGGCC 60.394 60.000 0.00 0.00 45.87 5.19 F
1534 1844 1.009829 GGAGTGAATAGTTGGCGCAG 58.990 55.000 10.83 0.00 0.00 5.18 F
1697 2008 1.447938 GCGCGTGTGAAAACTGATTTG 59.552 47.619 8.43 0.00 0.00 2.32 F
2635 2984 0.107703 CCTTGCCGTCAGCTATTCCA 60.108 55.000 0.00 0.00 44.23 3.53 F
3240 3611 0.321564 CGTTCATGGCAGGAACCTCA 60.322 55.000 31.81 2.86 41.16 3.86 F
3636 4056 4.082787 CCACGCATGTCTTAGAAACCATTT 60.083 41.667 0.00 0.00 0.00 2.32 F
4873 5310 1.201343 GAGACGGCAAGAGAATACGC 58.799 55.000 0.00 0.00 0.00 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2151 2485 1.003116 CAGCGCAGAAATCATAGCACC 60.003 52.381 11.47 0.0 0.00 5.01 R
2626 2975 0.995675 ATGGGGCTGGTGGAATAGCT 60.996 55.000 0.00 0.0 39.80 3.32 R
2630 2979 1.307647 GTCATGGGGCTGGTGGAAT 59.692 57.895 0.00 0.0 0.00 3.01 R
3145 3516 1.334869 CTGAGTTTTCCCAGCACACAC 59.665 52.381 0.00 0.0 0.00 3.82 R
4406 4835 2.429610 TCATACCGCTGGAGAAGTAACC 59.570 50.000 1.50 0.0 0.00 2.85 R
4873 5310 0.747255 AGTCTGGATCGTTCGATGGG 59.253 55.000 12.42 3.1 0.00 4.00 R
4900 5337 3.380637 GCGAGGGTTAGTAGTCATCTTCA 59.619 47.826 0.00 0.0 0.00 3.02 R
5871 6318 7.016153 TCATGGTGTTTCTACCTCAGTTATT 57.984 36.000 0.00 0.0 41.43 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 7.511959 AGGAGTCTTTTTGATTTGTAGGAAC 57.488 36.000 0.00 0.00 0.00 3.62
48 49 7.290813 AGGAGTCTTTTTGATTTGTAGGAACT 58.709 34.615 0.00 0.00 46.37 3.01
49 50 7.780271 AGGAGTCTTTTTGATTTGTAGGAACTT 59.220 33.333 0.00 0.00 41.75 2.66
50 51 8.076781 GGAGTCTTTTTGATTTGTAGGAACTTC 58.923 37.037 0.00 0.00 41.75 3.01
51 52 8.519799 AGTCTTTTTGATTTGTAGGAACTTCA 57.480 30.769 0.00 0.00 41.75 3.02
52 53 9.136323 AGTCTTTTTGATTTGTAGGAACTTCAT 57.864 29.630 0.00 0.00 41.75 2.57
64 65 8.703604 TGTAGGAACTTCATAGAATTTCTTCG 57.296 34.615 3.86 0.00 41.75 3.79
65 66 8.311836 TGTAGGAACTTCATAGAATTTCTTCGT 58.688 33.333 3.86 0.00 41.75 3.85
66 67 7.835634 AGGAACTTCATAGAATTTCTTCGTC 57.164 36.000 3.86 0.00 32.77 4.20
67 68 7.386851 AGGAACTTCATAGAATTTCTTCGTCA 58.613 34.615 3.86 0.00 32.77 4.35
68 69 7.878127 AGGAACTTCATAGAATTTCTTCGTCAA 59.122 33.333 3.86 0.00 32.77 3.18
69 70 8.504005 GGAACTTCATAGAATTTCTTCGTCAAA 58.496 33.333 3.86 0.00 36.45 2.69
71 72 9.831737 AACTTCATAGAATTTCTTCGTCAAATG 57.168 29.630 3.86 0.96 36.45 2.32
72 73 8.454106 ACTTCATAGAATTTCTTCGTCAAATGG 58.546 33.333 3.86 0.00 36.45 3.16
73 74 7.921786 TCATAGAATTTCTTCGTCAAATGGT 57.078 32.000 3.86 0.00 36.45 3.55
74 75 9.443323 TTCATAGAATTTCTTCGTCAAATGGTA 57.557 29.630 3.86 0.00 36.45 3.25
75 76 9.443323 TCATAGAATTTCTTCGTCAAATGGTAA 57.557 29.630 3.86 0.00 36.45 2.85
79 80 9.981114 AGAATTTCTTCGTCAAATGGTAAAATT 57.019 25.926 0.00 0.00 36.45 1.82
81 82 9.541143 AATTTCTTCGTCAAATGGTAAAATTGT 57.459 25.926 0.00 0.00 0.00 2.71
85 86 9.619316 TCTTCGTCAAATGGTAAAATTGTAATG 57.381 29.630 0.00 0.00 0.00 1.90
86 87 8.749841 TTCGTCAAATGGTAAAATTGTAATGG 57.250 30.769 0.00 0.00 0.00 3.16
87 88 8.112016 TCGTCAAATGGTAAAATTGTAATGGA 57.888 30.769 0.00 0.00 0.00 3.41
88 89 8.744652 TCGTCAAATGGTAAAATTGTAATGGAT 58.255 29.630 0.00 0.00 0.00 3.41
89 90 9.019764 CGTCAAATGGTAAAATTGTAATGGATC 57.980 33.333 0.00 0.00 0.00 3.36
90 91 9.868277 GTCAAATGGTAAAATTGTAATGGATCA 57.132 29.630 0.00 0.00 0.00 2.92
96 97 8.682710 TGGTAAAATTGTAATGGATCAACTAGC 58.317 33.333 0.00 0.00 0.00 3.42
97 98 8.135529 GGTAAAATTGTAATGGATCAACTAGCC 58.864 37.037 0.00 0.00 0.00 3.93
98 99 7.961326 AAAATTGTAATGGATCAACTAGCCT 57.039 32.000 0.00 0.00 33.51 4.58
99 100 7.961326 AAATTGTAATGGATCAACTAGCCTT 57.039 32.000 0.00 0.00 33.51 4.35
100 101 9.474313 AAAATTGTAATGGATCAACTAGCCTTA 57.526 29.630 0.00 0.00 33.51 2.69
101 102 9.474313 AAATTGTAATGGATCAACTAGCCTTAA 57.526 29.630 0.00 0.00 33.51 1.85
102 103 9.646522 AATTGTAATGGATCAACTAGCCTTAAT 57.353 29.630 0.00 0.00 33.51 1.40
103 104 9.646522 ATTGTAATGGATCAACTAGCCTTAATT 57.353 29.630 0.00 0.00 33.51 1.40
104 105 8.677148 TGTAATGGATCAACTAGCCTTAATTC 57.323 34.615 0.00 0.00 33.51 2.17
105 106 8.494433 TGTAATGGATCAACTAGCCTTAATTCT 58.506 33.333 0.00 0.00 33.51 2.40
106 107 9.343539 GTAATGGATCAACTAGCCTTAATTCTT 57.656 33.333 0.00 0.00 33.51 2.52
107 108 8.829373 AATGGATCAACTAGCCTTAATTCTTT 57.171 30.769 0.00 0.00 33.51 2.52
108 109 9.920946 AATGGATCAACTAGCCTTAATTCTTTA 57.079 29.630 0.00 0.00 33.51 1.85
109 110 8.964476 TGGATCAACTAGCCTTAATTCTTTAG 57.036 34.615 0.00 0.00 33.51 1.85
110 111 8.768397 TGGATCAACTAGCCTTAATTCTTTAGA 58.232 33.333 0.00 0.00 33.51 2.10
111 112 9.614792 GGATCAACTAGCCTTAATTCTTTAGAA 57.385 33.333 0.00 0.00 38.56 2.10
115 116 9.508567 CAACTAGCCTTAATTCTTTAGAAATGC 57.491 33.333 0.00 0.00 37.61 3.56
116 117 9.467796 AACTAGCCTTAATTCTTTAGAAATGCT 57.532 29.630 0.00 3.83 37.61 3.79
146 147 7.630242 TCTAACTTCAGATTTTTAGGCATGG 57.370 36.000 0.00 0.00 0.00 3.66
147 148 7.402054 TCTAACTTCAGATTTTTAGGCATGGA 58.598 34.615 0.00 0.00 0.00 3.41
148 149 6.916360 AACTTCAGATTTTTAGGCATGGAA 57.084 33.333 0.00 0.00 0.00 3.53
149 150 6.916360 ACTTCAGATTTTTAGGCATGGAAA 57.084 33.333 0.00 0.00 0.00 3.13
150 151 7.486407 ACTTCAGATTTTTAGGCATGGAAAT 57.514 32.000 0.00 0.00 0.00 2.17
151 152 7.550712 ACTTCAGATTTTTAGGCATGGAAATC 58.449 34.615 11.13 11.13 38.27 2.17
152 153 6.135290 TCAGATTTTTAGGCATGGAAATCG 57.865 37.500 12.47 9.36 41.20 3.34
153 154 5.885352 TCAGATTTTTAGGCATGGAAATCGA 59.115 36.000 12.47 10.78 41.20 3.59
154 155 6.376864 TCAGATTTTTAGGCATGGAAATCGAA 59.623 34.615 12.47 5.63 41.20 3.71
155 156 6.473455 CAGATTTTTAGGCATGGAAATCGAAC 59.527 38.462 12.47 0.00 41.20 3.95
156 157 5.713792 TTTTTAGGCATGGAAATCGAACA 57.286 34.783 0.00 0.00 0.00 3.18
157 158 5.913137 TTTTAGGCATGGAAATCGAACAT 57.087 34.783 0.00 0.00 0.00 2.71
158 159 5.913137 TTTAGGCATGGAAATCGAACATT 57.087 34.783 0.00 0.00 0.00 2.71
159 160 5.913137 TTAGGCATGGAAATCGAACATTT 57.087 34.783 0.00 0.00 0.00 2.32
160 161 4.806640 AGGCATGGAAATCGAACATTTT 57.193 36.364 0.00 0.00 0.00 1.82
161 162 5.151297 AGGCATGGAAATCGAACATTTTT 57.849 34.783 0.00 0.00 0.00 1.94
162 163 5.170748 AGGCATGGAAATCGAACATTTTTC 58.829 37.500 0.00 0.00 0.00 2.29
163 164 4.928615 GGCATGGAAATCGAACATTTTTCA 59.071 37.500 9.86 2.36 32.30 2.69
164 165 5.581874 GGCATGGAAATCGAACATTTTTCAT 59.418 36.000 9.86 4.43 32.30 2.57
165 166 6.455913 GGCATGGAAATCGAACATTTTTCATG 60.456 38.462 19.55 19.55 36.80 3.07
166 167 6.455913 GCATGGAAATCGAACATTTTTCATGG 60.456 38.462 22.83 11.26 35.72 3.66
167 168 4.928615 TGGAAATCGAACATTTTTCATGGC 59.071 37.500 9.86 0.00 32.30 4.40
168 169 4.928615 GGAAATCGAACATTTTTCATGGCA 59.071 37.500 9.86 0.00 32.30 4.92
169 170 5.407995 GGAAATCGAACATTTTTCATGGCAA 59.592 36.000 9.86 0.00 32.30 4.52
170 171 6.092533 GGAAATCGAACATTTTTCATGGCAAT 59.907 34.615 9.86 0.00 32.30 3.56
171 172 7.361116 GGAAATCGAACATTTTTCATGGCAATT 60.361 33.333 9.86 0.00 32.30 2.32
172 173 7.437793 AATCGAACATTTTTCATGGCAATTT 57.562 28.000 0.00 0.00 0.00 1.82
173 174 8.545229 AATCGAACATTTTTCATGGCAATTTA 57.455 26.923 0.00 0.00 0.00 1.40
174 175 8.721019 ATCGAACATTTTTCATGGCAATTTAT 57.279 26.923 0.00 0.00 0.00 1.40
175 176 7.961855 TCGAACATTTTTCATGGCAATTTATG 58.038 30.769 0.00 0.00 0.00 1.90
176 177 7.601886 TCGAACATTTTTCATGGCAATTTATGT 59.398 29.630 0.00 0.00 0.00 2.29
177 178 8.229137 CGAACATTTTTCATGGCAATTTATGTT 58.771 29.630 12.59 12.59 36.66 2.71
178 179 9.332301 GAACATTTTTCATGGCAATTTATGTTG 57.668 29.630 15.69 0.00 34.80 3.33
179 180 8.618702 ACATTTTTCATGGCAATTTATGTTGA 57.381 26.923 0.00 0.00 0.00 3.18
180 181 9.233649 ACATTTTTCATGGCAATTTATGTTGAT 57.766 25.926 0.00 0.00 0.00 2.57
181 182 9.497030 CATTTTTCATGGCAATTTATGTTGATG 57.503 29.630 0.00 0.00 0.00 3.07
182 183 6.665474 TTTCATGGCAATTTATGTTGATGC 57.335 33.333 0.00 0.00 36.31 3.91
183 184 4.361420 TCATGGCAATTTATGTTGATGCG 58.639 39.130 0.00 0.00 37.88 4.73
184 185 3.162202 TGGCAATTTATGTTGATGCGG 57.838 42.857 0.00 0.00 37.88 5.69
185 186 2.159128 TGGCAATTTATGTTGATGCGGG 60.159 45.455 0.00 0.00 37.88 6.13
186 187 2.472816 GCAATTTATGTTGATGCGGGG 58.527 47.619 0.00 0.00 0.00 5.73
187 188 2.100584 GCAATTTATGTTGATGCGGGGA 59.899 45.455 0.00 0.00 0.00 4.81
188 189 3.243839 GCAATTTATGTTGATGCGGGGAT 60.244 43.478 0.00 0.00 0.00 3.85
189 190 4.300803 CAATTTATGTTGATGCGGGGATG 58.699 43.478 0.00 0.00 0.00 3.51
190 191 1.979855 TTATGTTGATGCGGGGATGG 58.020 50.000 0.00 0.00 0.00 3.51
191 192 0.537143 TATGTTGATGCGGGGATGGC 60.537 55.000 0.00 0.00 0.00 4.40
192 193 2.440065 GTTGATGCGGGGATGGCA 60.440 61.111 0.00 0.00 45.71 4.92
193 194 2.051518 GTTGATGCGGGGATGGCAA 61.052 57.895 0.00 0.00 44.66 4.52
194 195 1.304796 TTGATGCGGGGATGGCAAA 60.305 52.632 0.00 0.00 44.66 3.68
195 196 0.687098 TTGATGCGGGGATGGCAAAT 60.687 50.000 0.00 0.00 44.66 2.32
196 197 0.687098 TGATGCGGGGATGGCAAATT 60.687 50.000 0.00 0.00 44.66 1.82
197 198 0.465287 GATGCGGGGATGGCAAATTT 59.535 50.000 0.00 0.00 44.66 1.82
198 199 1.686052 GATGCGGGGATGGCAAATTTA 59.314 47.619 0.00 0.00 44.66 1.40
199 200 1.110442 TGCGGGGATGGCAAATTTAG 58.890 50.000 0.00 0.00 37.49 1.85
200 201 1.111277 GCGGGGATGGCAAATTTAGT 58.889 50.000 0.00 0.00 0.00 2.24
201 202 1.480545 GCGGGGATGGCAAATTTAGTT 59.519 47.619 0.00 0.00 0.00 2.24
202 203 2.691011 GCGGGGATGGCAAATTTAGTTA 59.309 45.455 0.00 0.00 0.00 2.24
203 204 3.243401 GCGGGGATGGCAAATTTAGTTAG 60.243 47.826 0.00 0.00 0.00 2.34
204 205 3.243401 CGGGGATGGCAAATTTAGTTAGC 60.243 47.826 0.00 0.00 0.00 3.09
205 206 3.704061 GGGGATGGCAAATTTAGTTAGCA 59.296 43.478 0.00 0.00 0.00 3.49
206 207 4.161377 GGGGATGGCAAATTTAGTTAGCAA 59.839 41.667 0.00 0.00 0.00 3.91
207 208 5.351458 GGGATGGCAAATTTAGTTAGCAAG 58.649 41.667 0.00 0.00 0.00 4.01
208 209 4.805719 GGATGGCAAATTTAGTTAGCAAGC 59.194 41.667 0.00 0.00 0.00 4.01
209 210 4.862902 TGGCAAATTTAGTTAGCAAGCA 57.137 36.364 0.00 0.00 0.00 3.91
210 211 5.404466 TGGCAAATTTAGTTAGCAAGCAT 57.596 34.783 0.00 0.00 0.00 3.79
211 212 5.170021 TGGCAAATTTAGTTAGCAAGCATG 58.830 37.500 0.00 0.00 0.00 4.06
212 213 4.567959 GGCAAATTTAGTTAGCAAGCATGG 59.432 41.667 0.00 0.00 0.00 3.66
213 214 4.033243 GCAAATTTAGTTAGCAAGCATGGC 59.967 41.667 0.00 0.00 32.57 4.40
214 215 5.170021 CAAATTTAGTTAGCAAGCATGGCA 58.830 37.500 0.00 0.00 37.68 4.92
215 216 5.404466 AATTTAGTTAGCAAGCATGGCAA 57.596 34.783 0.00 0.00 37.68 4.52
216 217 5.603170 ATTTAGTTAGCAAGCATGGCAAT 57.397 34.783 0.00 0.00 37.68 3.56
217 218 5.404466 TTTAGTTAGCAAGCATGGCAATT 57.596 34.783 0.00 0.00 37.68 2.32
218 219 3.515330 AGTTAGCAAGCATGGCAATTC 57.485 42.857 0.00 0.00 37.68 2.17
219 220 3.094572 AGTTAGCAAGCATGGCAATTCT 58.905 40.909 0.00 0.00 37.68 2.40
220 221 3.129988 AGTTAGCAAGCATGGCAATTCTC 59.870 43.478 0.00 0.00 37.68 2.87
221 222 1.848652 AGCAAGCATGGCAATTCTCT 58.151 45.000 0.00 0.00 37.68 3.10
222 223 1.476891 AGCAAGCATGGCAATTCTCTG 59.523 47.619 0.00 0.00 37.68 3.35
223 224 1.470979 GCAAGCATGGCAATTCTCTGG 60.471 52.381 0.00 0.00 32.79 3.86
224 225 0.822164 AAGCATGGCAATTCTCTGGC 59.178 50.000 0.00 0.00 42.07 4.85
250 251 4.965119 AAATGAACTAGGTCGGATTTGC 57.035 40.909 2.72 0.00 0.00 3.68
251 252 2.396590 TGAACTAGGTCGGATTTGCC 57.603 50.000 2.72 0.00 0.00 4.52
252 253 1.626321 TGAACTAGGTCGGATTTGCCA 59.374 47.619 2.72 0.00 35.94 4.92
253 254 2.238646 TGAACTAGGTCGGATTTGCCAT 59.761 45.455 2.72 0.00 35.94 4.40
254 255 3.452990 TGAACTAGGTCGGATTTGCCATA 59.547 43.478 2.72 0.00 35.94 2.74
255 256 3.470645 ACTAGGTCGGATTTGCCATAC 57.529 47.619 0.00 0.00 35.94 2.39
256 257 3.039011 ACTAGGTCGGATTTGCCATACT 58.961 45.455 0.00 0.00 35.94 2.12
257 258 2.622064 AGGTCGGATTTGCCATACTC 57.378 50.000 0.00 0.00 35.94 2.59
258 259 1.202533 AGGTCGGATTTGCCATACTCG 60.203 52.381 0.00 0.00 35.94 4.18
259 260 1.472728 GGTCGGATTTGCCATACTCGT 60.473 52.381 0.00 0.00 35.94 4.18
260 261 1.859080 GTCGGATTTGCCATACTCGTC 59.141 52.381 0.00 0.00 35.94 4.20
261 262 1.478916 TCGGATTTGCCATACTCGTCA 59.521 47.619 0.00 0.00 35.94 4.35
262 263 2.093921 TCGGATTTGCCATACTCGTCAA 60.094 45.455 0.00 0.00 35.94 3.18
263 264 2.030457 CGGATTTGCCATACTCGTCAAC 59.970 50.000 0.00 0.00 35.94 3.18
264 265 3.270877 GGATTTGCCATACTCGTCAACT 58.729 45.455 0.00 0.00 36.34 3.16
265 266 4.439057 GGATTTGCCATACTCGTCAACTA 58.561 43.478 0.00 0.00 36.34 2.24
266 267 4.873827 GGATTTGCCATACTCGTCAACTAA 59.126 41.667 0.00 0.00 36.34 2.24
267 268 5.353123 GGATTTGCCATACTCGTCAACTAAA 59.647 40.000 0.00 0.00 36.34 1.85
268 269 5.600908 TTTGCCATACTCGTCAACTAAAC 57.399 39.130 0.00 0.00 0.00 2.01
269 270 4.530710 TGCCATACTCGTCAACTAAACT 57.469 40.909 0.00 0.00 0.00 2.66
270 271 4.890088 TGCCATACTCGTCAACTAAACTT 58.110 39.130 0.00 0.00 0.00 2.66
271 272 6.028146 TGCCATACTCGTCAACTAAACTTA 57.972 37.500 0.00 0.00 0.00 2.24
272 273 6.636705 TGCCATACTCGTCAACTAAACTTAT 58.363 36.000 0.00 0.00 0.00 1.73
273 274 6.755141 TGCCATACTCGTCAACTAAACTTATC 59.245 38.462 0.00 0.00 0.00 1.75
274 275 6.755141 GCCATACTCGTCAACTAAACTTATCA 59.245 38.462 0.00 0.00 0.00 2.15
275 276 7.438459 GCCATACTCGTCAACTAAACTTATCAT 59.562 37.037 0.00 0.00 0.00 2.45
276 277 9.314321 CCATACTCGTCAACTAAACTTATCATT 57.686 33.333 0.00 0.00 0.00 2.57
279 280 8.690680 ACTCGTCAACTAAACTTATCATTCTC 57.309 34.615 0.00 0.00 0.00 2.87
280 281 7.485277 ACTCGTCAACTAAACTTATCATTCTCG 59.515 37.037 0.00 0.00 0.00 4.04
281 282 6.750501 TCGTCAACTAAACTTATCATTCTCGG 59.249 38.462 0.00 0.00 0.00 4.63
282 283 6.508088 CGTCAACTAAACTTATCATTCTCGGC 60.508 42.308 0.00 0.00 0.00 5.54
283 284 6.312918 GTCAACTAAACTTATCATTCTCGGCA 59.687 38.462 0.00 0.00 0.00 5.69
284 285 6.876789 TCAACTAAACTTATCATTCTCGGCAA 59.123 34.615 0.00 0.00 0.00 4.52
285 286 7.389330 TCAACTAAACTTATCATTCTCGGCAAA 59.611 33.333 0.00 0.00 0.00 3.68
286 287 7.073342 ACTAAACTTATCATTCTCGGCAAAC 57.927 36.000 0.00 0.00 0.00 2.93
287 288 5.957842 AAACTTATCATTCTCGGCAAACA 57.042 34.783 0.00 0.00 0.00 2.83
288 289 6.515272 AAACTTATCATTCTCGGCAAACAT 57.485 33.333 0.00 0.00 0.00 2.71
289 290 7.624360 AAACTTATCATTCTCGGCAAACATA 57.376 32.000 0.00 0.00 0.00 2.29
290 291 7.624360 AACTTATCATTCTCGGCAAACATAA 57.376 32.000 0.00 0.00 0.00 1.90
291 292 7.807977 ACTTATCATTCTCGGCAAACATAAT 57.192 32.000 0.00 0.00 0.00 1.28
292 293 8.225603 ACTTATCATTCTCGGCAAACATAATT 57.774 30.769 0.00 0.00 0.00 1.40
293 294 8.686334 ACTTATCATTCTCGGCAAACATAATTT 58.314 29.630 0.00 0.00 0.00 1.82
294 295 8.854979 TTATCATTCTCGGCAAACATAATTTG 57.145 30.769 0.00 0.00 0.00 2.32
305 306 7.724128 GCAAACATAATTTGCCATAAAAAGC 57.276 32.000 12.31 0.00 46.51 3.51
306 307 6.465465 GCAAACATAATTTGCCATAAAAAGCG 59.535 34.615 12.31 0.00 46.51 4.68
307 308 7.517321 CAAACATAATTTGCCATAAAAAGCGT 58.483 30.769 0.00 0.00 0.00 5.07
308 309 7.665561 AACATAATTTGCCATAAAAAGCGTT 57.334 28.000 0.00 0.00 0.00 4.84
309 310 7.289587 ACATAATTTGCCATAAAAAGCGTTC 57.710 32.000 0.00 0.00 0.00 3.95
310 311 7.096551 ACATAATTTGCCATAAAAAGCGTTCT 58.903 30.769 0.00 0.00 0.00 3.01
311 312 8.247562 ACATAATTTGCCATAAAAAGCGTTCTA 58.752 29.630 0.00 0.00 0.00 2.10
312 313 9.248291 CATAATTTGCCATAAAAAGCGTTCTAT 57.752 29.630 0.00 0.00 0.00 1.98
313 314 9.816354 ATAATTTGCCATAAAAAGCGTTCTATT 57.184 25.926 0.00 0.00 0.00 1.73
314 315 8.546597 AATTTGCCATAAAAAGCGTTCTATTT 57.453 26.923 0.00 0.00 0.00 1.40
315 316 6.942886 TTGCCATAAAAAGCGTTCTATTTG 57.057 33.333 0.00 0.00 0.00 2.32
316 317 6.260870 TGCCATAAAAAGCGTTCTATTTGA 57.739 33.333 0.00 0.00 0.00 2.69
317 318 6.090129 TGCCATAAAAAGCGTTCTATTTGAC 58.910 36.000 0.00 0.00 0.00 3.18
318 319 6.090129 GCCATAAAAAGCGTTCTATTTGACA 58.910 36.000 0.00 0.00 0.00 3.58
319 320 6.751888 GCCATAAAAAGCGTTCTATTTGACAT 59.248 34.615 0.00 0.00 0.00 3.06
320 321 7.253750 GCCATAAAAAGCGTTCTATTTGACATG 60.254 37.037 0.00 0.00 0.00 3.21
321 322 7.253750 CCATAAAAAGCGTTCTATTTGACATGC 60.254 37.037 0.00 0.00 0.00 4.06
322 323 3.764885 AAGCGTTCTATTTGACATGCC 57.235 42.857 0.00 0.00 0.00 4.40
323 324 2.991250 AGCGTTCTATTTGACATGCCT 58.009 42.857 0.00 0.00 0.00 4.75
324 325 4.137116 AGCGTTCTATTTGACATGCCTA 57.863 40.909 0.00 0.00 0.00 3.93
325 326 4.513442 AGCGTTCTATTTGACATGCCTAA 58.487 39.130 0.00 0.00 0.00 2.69
326 327 4.941263 AGCGTTCTATTTGACATGCCTAAA 59.059 37.500 0.00 0.00 0.00 1.85
327 328 5.414454 AGCGTTCTATTTGACATGCCTAAAA 59.586 36.000 0.00 0.00 0.00 1.52
328 329 6.072175 AGCGTTCTATTTGACATGCCTAAAAA 60.072 34.615 0.00 0.00 0.00 1.94
329 330 6.751888 GCGTTCTATTTGACATGCCTAAAAAT 59.248 34.615 0.00 0.00 0.00 1.82
330 331 7.044052 GCGTTCTATTTGACATGCCTAAAAATC 60.044 37.037 0.00 0.00 0.00 2.17
331 332 8.184192 CGTTCTATTTGACATGCCTAAAAATCT 58.816 33.333 0.00 0.00 0.00 2.40
332 333 9.294030 GTTCTATTTGACATGCCTAAAAATCTG 57.706 33.333 0.00 0.00 0.00 2.90
333 334 8.806429 TCTATTTGACATGCCTAAAAATCTGA 57.194 30.769 0.00 0.00 0.00 3.27
334 335 8.677300 TCTATTTGACATGCCTAAAAATCTGAC 58.323 33.333 0.00 0.00 0.00 3.51
335 336 4.944962 TGACATGCCTAAAAATCTGACG 57.055 40.909 0.00 0.00 0.00 4.35
336 337 4.323417 TGACATGCCTAAAAATCTGACGT 58.677 39.130 0.00 0.00 0.00 4.34
337 338 4.759693 TGACATGCCTAAAAATCTGACGTT 59.240 37.500 0.00 0.00 0.00 3.99
338 339 5.106712 TGACATGCCTAAAAATCTGACGTTC 60.107 40.000 0.00 0.00 0.00 3.95
339 340 4.142902 ACATGCCTAAAAATCTGACGTTCG 60.143 41.667 0.00 0.00 0.00 3.95
340 341 3.395639 TGCCTAAAAATCTGACGTTCGT 58.604 40.909 0.00 0.00 0.00 3.85
341 342 3.810941 TGCCTAAAAATCTGACGTTCGTT 59.189 39.130 0.00 0.00 0.00 3.85
342 343 4.148891 GCCTAAAAATCTGACGTTCGTTG 58.851 43.478 0.00 0.00 0.00 4.10
343 344 4.708601 CCTAAAAATCTGACGTTCGTTGG 58.291 43.478 0.00 0.00 0.00 3.77
344 345 4.449743 CCTAAAAATCTGACGTTCGTTGGA 59.550 41.667 0.00 2.05 0.00 3.53
345 346 5.121768 CCTAAAAATCTGACGTTCGTTGGAT 59.878 40.000 0.00 4.18 0.00 3.41
346 347 6.311935 CCTAAAAATCTGACGTTCGTTGGATA 59.688 38.462 0.00 0.00 0.00 2.59
347 348 6.737254 AAAAATCTGACGTTCGTTGGATAT 57.263 33.333 0.00 0.00 0.00 1.63
348 349 6.737254 AAAATCTGACGTTCGTTGGATATT 57.263 33.333 0.00 2.83 0.00 1.28
349 350 5.968387 AATCTGACGTTCGTTGGATATTC 57.032 39.130 0.00 0.00 0.00 1.75
350 351 3.431856 TCTGACGTTCGTTGGATATTCG 58.568 45.455 0.00 0.00 0.00 3.34
351 352 2.532235 TGACGTTCGTTGGATATTCGG 58.468 47.619 0.00 0.00 0.00 4.30
352 353 2.164017 TGACGTTCGTTGGATATTCGGA 59.836 45.455 0.00 0.00 0.00 4.55
353 354 3.181484 TGACGTTCGTTGGATATTCGGAT 60.181 43.478 0.00 0.00 0.00 4.18
354 355 3.378339 ACGTTCGTTGGATATTCGGATC 58.622 45.455 0.00 0.00 0.00 3.36
355 356 3.067742 ACGTTCGTTGGATATTCGGATCT 59.932 43.478 0.00 0.00 0.00 2.75
356 357 4.276678 ACGTTCGTTGGATATTCGGATCTA 59.723 41.667 0.00 0.00 0.00 1.98
357 358 5.217393 CGTTCGTTGGATATTCGGATCTAA 58.783 41.667 0.00 0.00 0.00 2.10
358 359 5.862323 CGTTCGTTGGATATTCGGATCTAAT 59.138 40.000 0.00 0.00 30.18 1.73
359 360 6.365247 CGTTCGTTGGATATTCGGATCTAATT 59.635 38.462 0.00 0.00 30.18 1.40
360 361 7.410513 CGTTCGTTGGATATTCGGATCTAATTC 60.411 40.741 0.00 0.00 30.18 2.17
361 362 7.228314 TCGTTGGATATTCGGATCTAATTCT 57.772 36.000 0.00 0.00 30.18 2.40
362 363 7.667557 TCGTTGGATATTCGGATCTAATTCTT 58.332 34.615 0.00 0.00 30.18 2.52
363 364 8.148351 TCGTTGGATATTCGGATCTAATTCTTT 58.852 33.333 0.00 0.00 30.18 2.52
364 365 8.774586 CGTTGGATATTCGGATCTAATTCTTTT 58.225 33.333 0.00 0.00 30.18 2.27
367 368 9.720769 TGGATATTCGGATCTAATTCTTTTACC 57.279 33.333 0.00 0.00 0.00 2.85
368 369 9.945904 GGATATTCGGATCTAATTCTTTTACCT 57.054 33.333 0.00 0.00 0.00 3.08
370 371 9.726438 ATATTCGGATCTAATTCTTTTACCTGG 57.274 33.333 0.00 0.00 0.00 4.45
371 372 5.365619 TCGGATCTAATTCTTTTACCTGGC 58.634 41.667 0.00 0.00 0.00 4.85
372 373 5.130477 TCGGATCTAATTCTTTTACCTGGCT 59.870 40.000 0.00 0.00 0.00 4.75
373 374 6.325545 TCGGATCTAATTCTTTTACCTGGCTA 59.674 38.462 0.00 0.00 0.00 3.93
374 375 6.647067 CGGATCTAATTCTTTTACCTGGCTAG 59.353 42.308 0.00 0.00 0.00 3.42
391 392 7.814264 CTGGCTAGGAAGTTTTCAATATGAT 57.186 36.000 0.00 0.00 0.00 2.45
392 393 7.572523 TGGCTAGGAAGTTTTCAATATGATG 57.427 36.000 0.00 0.00 0.00 3.07
393 394 6.039717 TGGCTAGGAAGTTTTCAATATGATGC 59.960 38.462 0.00 0.00 0.00 3.91
394 395 6.039717 GGCTAGGAAGTTTTCAATATGATGCA 59.960 38.462 0.00 0.00 0.00 3.96
395 396 7.416664 GGCTAGGAAGTTTTCAATATGATGCAA 60.417 37.037 0.00 0.00 0.00 4.08
396 397 7.975616 GCTAGGAAGTTTTCAATATGATGCAAA 59.024 33.333 0.00 0.00 0.00 3.68
397 398 9.859427 CTAGGAAGTTTTCAATATGATGCAAAA 57.141 29.630 0.00 0.00 0.00 2.44
399 400 9.374838 AGGAAGTTTTCAATATGATGCAAAATC 57.625 29.630 0.00 0.00 0.00 2.17
400 401 9.153721 GGAAGTTTTCAATATGATGCAAAATCA 57.846 29.630 0.00 0.00 0.00 2.57
437 438 8.635765 AAGTATACCAAAAGTCAATCACATGT 57.364 30.769 0.00 0.00 0.00 3.21
438 439 8.635765 AGTATACCAAAAGTCAATCACATGTT 57.364 30.769 0.00 0.00 0.00 2.71
439 440 8.514594 AGTATACCAAAAGTCAATCACATGTTG 58.485 33.333 0.00 0.00 0.00 3.33
440 441 5.850557 ACCAAAAGTCAATCACATGTTGA 57.149 34.783 0.00 0.00 39.11 3.18
442 443 6.449698 ACCAAAAGTCAATCACATGTTGATC 58.550 36.000 0.00 0.00 44.86 2.92
443 444 6.266103 ACCAAAAGTCAATCACATGTTGATCT 59.734 34.615 0.00 0.00 44.86 2.75
444 445 6.805271 CCAAAAGTCAATCACATGTTGATCTC 59.195 38.462 0.00 0.00 44.86 2.75
445 446 7.364970 CAAAAGTCAATCACATGTTGATCTCA 58.635 34.615 0.00 0.00 44.86 3.27
446 447 7.514784 AAAGTCAATCACATGTTGATCTCAA 57.485 32.000 0.00 0.00 44.86 3.02
447 448 7.514784 AAGTCAATCACATGTTGATCTCAAA 57.485 32.000 0.00 0.00 44.86 2.69
448 449 7.698506 AGTCAATCACATGTTGATCTCAAAT 57.301 32.000 0.00 0.00 44.86 2.32
449 450 8.797350 AGTCAATCACATGTTGATCTCAAATA 57.203 30.769 0.00 0.00 44.86 1.40
450 451 9.234827 AGTCAATCACATGTTGATCTCAAATAA 57.765 29.630 0.00 0.00 44.86 1.40
451 452 9.844790 GTCAATCACATGTTGATCTCAAATAAA 57.155 29.630 0.00 0.00 44.86 1.40
484 485 9.654663 ACTAGGTTGACTTTCTTGTATATGAAC 57.345 33.333 0.00 0.00 0.00 3.18
485 486 9.653287 CTAGGTTGACTTTCTTGTATATGAACA 57.347 33.333 0.00 0.00 0.00 3.18
486 487 8.918202 AGGTTGACTTTCTTGTATATGAACAA 57.082 30.769 0.00 0.00 37.75 2.83
498 499 6.806751 TGTATATGAACAAGAGTGCTACTCC 58.193 40.000 11.24 0.00 46.18 3.85
499 500 3.618690 ATGAACAAGAGTGCTACTCCC 57.381 47.619 11.24 0.70 46.18 4.30
500 501 2.609747 TGAACAAGAGTGCTACTCCCT 58.390 47.619 11.24 0.00 46.18 4.20
501 502 2.563179 TGAACAAGAGTGCTACTCCCTC 59.437 50.000 11.24 5.63 46.18 4.30
502 503 1.562783 ACAAGAGTGCTACTCCCTCC 58.437 55.000 11.24 0.00 46.18 4.30
503 504 0.457851 CAAGAGTGCTACTCCCTCCG 59.542 60.000 11.24 0.00 46.18 4.63
504 505 0.039911 AAGAGTGCTACTCCCTCCGT 59.960 55.000 11.24 0.00 46.18 4.69
505 506 0.039911 AGAGTGCTACTCCCTCCGTT 59.960 55.000 11.24 0.00 46.18 4.44
506 507 0.456628 GAGTGCTACTCCCTCCGTTC 59.543 60.000 5.33 0.00 39.28 3.95
507 508 0.971447 AGTGCTACTCCCTCCGTTCC 60.971 60.000 0.00 0.00 0.00 3.62
508 509 0.971447 GTGCTACTCCCTCCGTTCCT 60.971 60.000 0.00 0.00 0.00 3.36
509 510 0.627451 TGCTACTCCCTCCGTTCCTA 59.373 55.000 0.00 0.00 0.00 2.94
510 511 1.006281 TGCTACTCCCTCCGTTCCTAA 59.994 52.381 0.00 0.00 0.00 2.69
511 512 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
512 513 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
513 514 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
514 515 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
515 516 5.713861 GCTACTCCCTCCGTTCCTAAATATA 59.286 44.000 0.00 0.00 0.00 0.86
516 517 6.210185 GCTACTCCCTCCGTTCCTAAATATAA 59.790 42.308 0.00 0.00 0.00 0.98
517 518 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
518 519 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
519 520 6.614496 ACTCCCTCCGTTCCTAAATATAAGTT 59.386 38.462 0.00 0.00 0.00 2.66
520 521 7.059202 TCCCTCCGTTCCTAAATATAAGTTC 57.941 40.000 0.00 0.00 0.00 3.01
521 522 6.612456 TCCCTCCGTTCCTAAATATAAGTTCA 59.388 38.462 0.00 0.00 0.00 3.18
522 523 7.291651 TCCCTCCGTTCCTAAATATAAGTTCAT 59.708 37.037 0.00 0.00 0.00 2.57
523 524 8.591072 CCCTCCGTTCCTAAATATAAGTTCATA 58.409 37.037 0.00 0.00 0.00 2.15
629 639 6.368791 CGATTGAGGCGGATTTAAATCATAGA 59.631 38.462 25.55 8.35 37.15 1.98
635 645 7.875971 AGGCGGATTTAAATCATAGACATTTC 58.124 34.615 25.55 7.00 37.15 2.17
646 656 8.929260 AATCATAGACATTTCATCCAATAGCA 57.071 30.769 0.00 0.00 0.00 3.49
692 702 3.974871 TTTTTGTCGTTACCTGAAGCC 57.025 42.857 0.00 0.00 0.00 4.35
705 715 8.017373 CGTTACCTGAAGCCATCATTATTAATG 58.983 37.037 9.70 9.70 37.44 1.90
756 766 7.056635 TCATCCTTGACACTTTTTCTCTTTCT 58.943 34.615 0.00 0.00 0.00 2.52
757 767 6.927294 TCCTTGACACTTTTTCTCTTTCTC 57.073 37.500 0.00 0.00 0.00 2.87
758 768 6.653989 TCCTTGACACTTTTTCTCTTTCTCT 58.346 36.000 0.00 0.00 0.00 3.10
759 769 7.112779 TCCTTGACACTTTTTCTCTTTCTCTT 58.887 34.615 0.00 0.00 0.00 2.85
760 770 7.611855 TCCTTGACACTTTTTCTCTTTCTCTTT 59.388 33.333 0.00 0.00 0.00 2.52
761 771 7.912773 CCTTGACACTTTTTCTCTTTCTCTTTC 59.087 37.037 0.00 0.00 0.00 2.62
764 774 7.611855 TGACACTTTTTCTCTTTCTCTTTCCTT 59.388 33.333 0.00 0.00 0.00 3.36
779 789 8.281212 TCTCTTTCCTTTGCATTTATCTTACC 57.719 34.615 0.00 0.00 0.00 2.85
780 790 8.109634 TCTCTTTCCTTTGCATTTATCTTACCT 58.890 33.333 0.00 0.00 0.00 3.08
781 791 9.396022 CTCTTTCCTTTGCATTTATCTTACCTA 57.604 33.333 0.00 0.00 0.00 3.08
819 832 6.503524 TCTTCTTTGGTAACTGATGTTTTGC 58.496 36.000 0.00 0.00 37.59 3.68
821 834 4.892934 TCTTTGGTAACTGATGTTTTGCCT 59.107 37.500 0.00 0.00 37.59 4.75
823 836 3.826524 TGGTAACTGATGTTTTGCCTGA 58.173 40.909 0.00 0.00 37.59 3.86
827 840 6.045955 GGTAACTGATGTTTTGCCTGAAAAA 58.954 36.000 0.00 0.00 35.27 1.94
942 955 6.808008 TGTGCTATCTTTTCTTTTCCTCTG 57.192 37.500 0.00 0.00 0.00 3.35
943 956 5.707298 TGTGCTATCTTTTCTTTTCCTCTGG 59.293 40.000 0.00 0.00 0.00 3.86
944 957 5.124617 GTGCTATCTTTTCTTTTCCTCTGGG 59.875 44.000 0.00 0.00 0.00 4.45
945 958 5.014123 TGCTATCTTTTCTTTTCCTCTGGGA 59.986 40.000 0.00 0.00 40.36 4.37
953 975 3.074390 TCTTTTCCTCTGGGATTTGCAGA 59.926 43.478 0.00 0.00 41.87 4.26
1094 1383 3.818787 GCCCTAGAACCGCGACGA 61.819 66.667 8.23 0.00 0.00 4.20
1097 1386 1.352404 CCTAGAACCGCGACGAGAG 59.648 63.158 8.23 0.00 0.00 3.20
1337 1643 4.226427 AGAATTTGCATCTCCTGTGCTA 57.774 40.909 0.00 0.00 42.92 3.49
1353 1659 0.394488 GCTACTTCCTTTGGGAGGCC 60.394 60.000 0.00 0.00 45.87 5.19
1379 1685 3.438781 TGCCGCGTAAGATTTCAAATTCT 59.561 39.130 4.92 0.00 43.02 2.40
1419 1729 4.093556 GCTAGTCTACACATGAAAGCAACC 59.906 45.833 0.00 0.00 0.00 3.77
1505 1815 3.248495 TGTGTCTGAAACCACAACGTA 57.752 42.857 0.00 0.00 38.56 3.57
1528 1838 3.659786 TGTTCCGTGGAGTGAATAGTTG 58.340 45.455 0.00 0.00 0.00 3.16
1534 1844 1.009829 GGAGTGAATAGTTGGCGCAG 58.990 55.000 10.83 0.00 0.00 5.18
1550 1860 1.528129 GCAGTTTGGGAGAAGTCCTG 58.472 55.000 0.00 0.00 43.36 3.86
1567 1878 5.680619 AGTCCTGTTGTGTCAAACTGAATA 58.319 37.500 0.00 0.00 32.45 1.75
1614 1925 4.051237 GCAGGGAGTTTGACAACAAATTC 58.949 43.478 0.00 0.00 45.71 2.17
1620 1931 2.132740 TTGACAACAAATTCGCTGCC 57.867 45.000 0.00 0.00 32.73 4.85
1656 1967 7.795431 TTTGCGAAAGATTATTGCTTACTTG 57.205 32.000 0.00 0.00 0.00 3.16
1697 2008 1.447938 GCGCGTGTGAAAACTGATTTG 59.552 47.619 8.43 0.00 0.00 2.32
1735 2046 8.909923 TCATATGAAACAATCTGATGCTCAAAT 58.090 29.630 1.98 0.00 0.00 2.32
1743 2054 2.170397 TCTGATGCTCAAATTAGCCGGA 59.830 45.455 5.05 0.00 42.05 5.14
1979 2312 7.165460 TCGAACAATTGGTCTAGTAGAATGA 57.835 36.000 20.81 5.02 0.00 2.57
1984 2317 6.595716 ACAATTGGTCTAGTAGAATGAACAGC 59.404 38.462 10.83 0.00 0.00 4.40
2066 2400 9.383519 CATTCCAGTGTTCATATACAAGTTAGT 57.616 33.333 0.00 0.00 0.00 2.24
2075 2409 8.596380 GTTCATATACAAGTTAGTCAAGTGCTC 58.404 37.037 0.00 0.00 0.00 4.26
2151 2485 3.274288 GTTCTGGCATCCTCTAAAGTGG 58.726 50.000 0.00 0.00 0.00 4.00
2164 2498 5.529060 CCTCTAAAGTGGGTGCTATGATTTC 59.471 44.000 0.00 0.00 0.00 2.17
2181 2515 4.034258 CTGCGCTGGCACCAGTTG 62.034 66.667 17.72 11.73 46.21 3.16
2197 2531 4.855531 CCAGTTGGTAACTTGCTGTAAAC 58.144 43.478 0.00 0.00 40.46 2.01
2209 2543 3.495331 TGCTGTAAACATTCCATGTGGT 58.505 40.909 0.00 0.00 44.07 4.16
2228 2562 3.118408 TGGTCGCCTCTGCTGTAAATAAT 60.118 43.478 0.00 0.00 34.43 1.28
2243 2577 9.619316 GCTGTAAATAATGTGTTCATGTTAACA 57.381 29.630 11.41 11.41 37.03 2.41
2253 2587 6.041409 TGTGTTCATGTTAACATTGGATGGTT 59.959 34.615 18.50 0.00 41.18 3.67
2254 2588 6.365789 GTGTTCATGTTAACATTGGATGGTTG 59.634 38.462 18.50 6.07 41.18 3.77
2264 2598 4.098349 ACATTGGATGGTTGGATGAAATCG 59.902 41.667 0.00 0.00 38.39 3.34
2342 2678 1.669265 GCACATTTCCTAGTAACGCCC 59.331 52.381 0.00 0.00 0.00 6.13
2430 2769 4.738124 TCGAGTCAAGTAGAAAGATGCAG 58.262 43.478 0.00 0.00 0.00 4.41
2496 2845 4.800554 CTTCACACGAAGCCCCTT 57.199 55.556 0.00 0.00 42.17 3.95
2626 2975 2.454832 CTTCCTGAGCCTTGCCGTCA 62.455 60.000 0.00 0.00 0.00 4.35
2630 2979 2.230994 CTGAGCCTTGCCGTCAGCTA 62.231 60.000 0.00 0.00 44.23 3.32
2635 2984 0.107703 CCTTGCCGTCAGCTATTCCA 60.108 55.000 0.00 0.00 44.23 3.53
2747 3096 1.376683 GTGAACGCCCCTATGCACA 60.377 57.895 0.00 0.00 0.00 4.57
2793 3142 2.879233 GCCCGAGTGTGACCCTTCA 61.879 63.158 0.00 0.00 0.00 3.02
2814 3163 4.019411 TCAGTGGTTGCATCTTCCTTGATA 60.019 41.667 0.00 0.00 0.00 2.15
2895 3244 1.970640 GGTTCAGCAGGGTGGAAAATT 59.029 47.619 0.00 0.00 0.00 1.82
2997 3347 7.389330 GGATGTTTGGATCGGGTTTTAAAATTT 59.611 33.333 3.52 0.00 0.00 1.82
3145 3516 1.787989 GCATGCGTTCATCTGTTCGTG 60.788 52.381 0.00 0.00 0.00 4.35
3146 3517 1.460743 CATGCGTTCATCTGTTCGTGT 59.539 47.619 0.00 0.00 0.00 4.49
3199 3570 8.924511 ATATGTATGAATTCGTGGGAGAAAAT 57.075 30.769 10.54 0.00 33.43 1.82
3240 3611 0.321564 CGTTCATGGCAGGAACCTCA 60.322 55.000 31.81 2.86 41.16 3.86
3405 3776 6.001449 TGCTTAATCTGTACCTTGCCTTAT 57.999 37.500 0.00 0.00 0.00 1.73
3555 3975 7.217200 GGTGCCAATCTATCTTATAACTGACA 58.783 38.462 0.00 0.00 0.00 3.58
3636 4056 4.082787 CCACGCATGTCTTAGAAACCATTT 60.083 41.667 0.00 0.00 0.00 2.32
3838 4258 9.628500 GAATAAAATCTATGAACTGTTAGGGGT 57.372 33.333 0.00 0.00 0.00 4.95
4022 4442 6.014840 GGCTTTGTATACCTACTATGCCACTA 60.015 42.308 14.55 0.00 45.13 2.74
4159 4584 5.643379 AGTCAGTTTCTTTCTTTGTTGCA 57.357 34.783 0.00 0.00 0.00 4.08
4227 4652 4.421948 CGGTTGACTATGTGGAACTAGTC 58.578 47.826 0.00 3.37 42.58 2.59
4528 4965 4.783036 CGCTGATGTTGAACGTTATTCTTG 59.217 41.667 0.00 0.00 0.00 3.02
4606 5043 8.749354 ACTTATTTCTGTTTTCAGTTGAAACCT 58.251 29.630 6.79 0.00 46.98 3.50
4805 5242 7.167801 GCCTGTTTTTCTGATATCTCGTACTAC 59.832 40.741 3.98 0.00 0.00 2.73
4873 5310 1.201343 GAGACGGCAAGAGAATACGC 58.799 55.000 0.00 0.00 0.00 4.42
4955 5392 3.595709 TCTTTTAACTTTGTGTCCGCG 57.404 42.857 0.00 0.00 0.00 6.46
4971 5408 0.982673 CGCGTCTAGTTCCGTCTTTG 59.017 55.000 0.00 0.00 0.00 2.77
4975 5412 2.978489 CGTCTAGTTCCGTCTTTGTGTC 59.022 50.000 0.00 0.00 0.00 3.67
4976 5413 3.549423 CGTCTAGTTCCGTCTTTGTGTCA 60.549 47.826 0.00 0.00 0.00 3.58
4977 5414 4.365723 GTCTAGTTCCGTCTTTGTGTCAA 58.634 43.478 0.00 0.00 0.00 3.18
5021 5462 0.749649 TTGCAAATCCAAACCAGCGT 59.250 45.000 0.00 0.00 0.00 5.07
5072 5516 2.592574 TGCTTGCTTGAGCGTGCT 60.593 55.556 16.67 0.00 45.64 4.40
5091 5535 3.244181 TGCTTCTTTTCCATGCCTTTTCC 60.244 43.478 0.00 0.00 0.00 3.13
5381 5827 0.033601 TTATGGCCCCATGCGACTTT 60.034 50.000 10.02 0.00 42.61 2.66
5450 5896 4.229876 GTCTGCAAGTAATCAACAAAGGC 58.770 43.478 0.00 0.00 33.76 4.35
5871 6318 7.201794 GGGAGTAATATACATAGCGCACATCTA 60.202 40.741 11.47 0.00 0.00 1.98
5895 6342 4.974645 AACTGAGGTAGAAACACCATGA 57.025 40.909 0.00 0.00 41.40 3.07
6058 6511 1.719529 TAAGTTTCTGACCCGTGGGA 58.280 50.000 13.01 0.00 38.96 4.37
6096 6549 6.220726 ACATACCCCTGATAAATTTTGTGC 57.779 37.500 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.232473 GTTCCTACAAATCAAAAAGACTCCTAT 57.768 33.333 0.00 0.00 0.00 2.57
22 23 8.437575 AGTTCCTACAAATCAAAAAGACTCCTA 58.562 33.333 0.00 0.00 0.00 2.94
23 24 7.290813 AGTTCCTACAAATCAAAAAGACTCCT 58.709 34.615 0.00 0.00 0.00 3.69
24 25 7.511959 AGTTCCTACAAATCAAAAAGACTCC 57.488 36.000 0.00 0.00 0.00 3.85
25 26 8.621286 TGAAGTTCCTACAAATCAAAAAGACTC 58.379 33.333 0.00 0.00 0.00 3.36
26 27 8.519799 TGAAGTTCCTACAAATCAAAAAGACT 57.480 30.769 0.00 0.00 0.00 3.24
38 39 9.151471 CGAAGAAATTCTATGAAGTTCCTACAA 57.849 33.333 14.21 0.00 0.00 2.41
39 40 8.311836 ACGAAGAAATTCTATGAAGTTCCTACA 58.688 33.333 14.21 0.00 0.00 2.74
40 41 8.705048 ACGAAGAAATTCTATGAAGTTCCTAC 57.295 34.615 14.21 7.52 0.00 3.18
41 42 8.528643 TGACGAAGAAATTCTATGAAGTTCCTA 58.471 33.333 14.21 0.00 0.00 2.94
42 43 7.386851 TGACGAAGAAATTCTATGAAGTTCCT 58.613 34.615 14.21 4.58 0.00 3.36
43 44 7.596749 TGACGAAGAAATTCTATGAAGTTCC 57.403 36.000 14.21 3.08 0.00 3.62
45 46 9.831737 CATTTGACGAAGAAATTCTATGAAGTT 57.168 29.630 0.00 0.00 0.00 2.66
46 47 8.454106 CCATTTGACGAAGAAATTCTATGAAGT 58.546 33.333 0.00 0.00 0.00 3.01
47 48 8.454106 ACCATTTGACGAAGAAATTCTATGAAG 58.546 33.333 0.00 0.00 0.00 3.02
48 49 8.335532 ACCATTTGACGAAGAAATTCTATGAA 57.664 30.769 0.00 0.00 0.00 2.57
49 50 7.921786 ACCATTTGACGAAGAAATTCTATGA 57.078 32.000 0.00 0.00 0.00 2.15
53 54 9.981114 AATTTTACCATTTGACGAAGAAATTCT 57.019 25.926 0.00 0.00 0.00 2.40
55 56 9.541143 ACAATTTTACCATTTGACGAAGAAATT 57.459 25.926 0.00 0.00 0.00 1.82
59 60 9.619316 CATTACAATTTTACCATTTGACGAAGA 57.381 29.630 0.00 0.00 0.00 2.87
60 61 8.859156 CCATTACAATTTTACCATTTGACGAAG 58.141 33.333 0.00 0.00 0.00 3.79
61 62 8.577296 TCCATTACAATTTTACCATTTGACGAA 58.423 29.630 0.00 0.00 0.00 3.85
62 63 8.112016 TCCATTACAATTTTACCATTTGACGA 57.888 30.769 0.00 0.00 0.00 4.20
63 64 8.925161 ATCCATTACAATTTTACCATTTGACG 57.075 30.769 0.00 0.00 0.00 4.35
64 65 9.868277 TGATCCATTACAATTTTACCATTTGAC 57.132 29.630 0.00 0.00 0.00 3.18
70 71 8.682710 GCTAGTTGATCCATTACAATTTTACCA 58.317 33.333 0.00 0.00 0.00 3.25
71 72 8.135529 GGCTAGTTGATCCATTACAATTTTACC 58.864 37.037 0.00 0.00 0.00 2.85
72 73 8.903820 AGGCTAGTTGATCCATTACAATTTTAC 58.096 33.333 0.00 0.00 0.00 2.01
73 74 9.474313 AAGGCTAGTTGATCCATTACAATTTTA 57.526 29.630 0.00 0.00 0.00 1.52
74 75 7.961326 AGGCTAGTTGATCCATTACAATTTT 57.039 32.000 0.00 0.00 0.00 1.82
75 76 7.961326 AAGGCTAGTTGATCCATTACAATTT 57.039 32.000 0.00 0.00 0.00 1.82
76 77 9.646522 ATTAAGGCTAGTTGATCCATTACAATT 57.353 29.630 0.00 0.00 0.00 2.32
77 78 9.646522 AATTAAGGCTAGTTGATCCATTACAAT 57.353 29.630 0.00 0.00 0.00 2.71
78 79 9.120538 GAATTAAGGCTAGTTGATCCATTACAA 57.879 33.333 0.00 0.00 0.00 2.41
79 80 8.494433 AGAATTAAGGCTAGTTGATCCATTACA 58.506 33.333 0.00 0.00 0.00 2.41
80 81 8.910351 AGAATTAAGGCTAGTTGATCCATTAC 57.090 34.615 0.00 0.00 0.00 1.89
81 82 9.920946 AAAGAATTAAGGCTAGTTGATCCATTA 57.079 29.630 0.00 0.00 0.00 1.90
82 83 8.829373 AAAGAATTAAGGCTAGTTGATCCATT 57.171 30.769 0.00 0.00 0.00 3.16
83 84 9.566432 CTAAAGAATTAAGGCTAGTTGATCCAT 57.434 33.333 0.00 0.00 0.00 3.41
84 85 8.768397 TCTAAAGAATTAAGGCTAGTTGATCCA 58.232 33.333 0.00 0.00 0.00 3.41
85 86 9.614792 TTCTAAAGAATTAAGGCTAGTTGATCC 57.385 33.333 0.00 0.00 0.00 3.36
89 90 9.508567 GCATTTCTAAAGAATTAAGGCTAGTTG 57.491 33.333 0.00 0.00 33.54 3.16
90 91 9.467796 AGCATTTCTAAAGAATTAAGGCTAGTT 57.532 29.630 1.39 0.00 33.54 2.24
120 121 8.689972 CCATGCCTAAAAATCTGAAGTTAGATT 58.310 33.333 0.00 0.00 46.50 2.40
121 122 8.055181 TCCATGCCTAAAAATCTGAAGTTAGAT 58.945 33.333 6.84 0.00 39.03 1.98
122 123 7.402054 TCCATGCCTAAAAATCTGAAGTTAGA 58.598 34.615 6.84 0.00 0.00 2.10
123 124 7.630242 TCCATGCCTAAAAATCTGAAGTTAG 57.370 36.000 0.00 0.00 0.00 2.34
124 125 8.415950 TTTCCATGCCTAAAAATCTGAAGTTA 57.584 30.769 0.00 0.00 0.00 2.24
125 126 6.916360 TTCCATGCCTAAAAATCTGAAGTT 57.084 33.333 0.00 0.00 0.00 2.66
126 127 6.916360 TTTCCATGCCTAAAAATCTGAAGT 57.084 33.333 0.00 0.00 0.00 3.01
127 128 6.694411 CGATTTCCATGCCTAAAAATCTGAAG 59.306 38.462 0.00 0.00 36.45 3.02
128 129 6.376864 TCGATTTCCATGCCTAAAAATCTGAA 59.623 34.615 0.00 0.00 36.45 3.02
129 130 5.885352 TCGATTTCCATGCCTAAAAATCTGA 59.115 36.000 0.00 0.00 36.45 3.27
130 131 6.135290 TCGATTTCCATGCCTAAAAATCTG 57.865 37.500 0.00 0.00 36.45 2.90
131 132 6.152661 TGTTCGATTTCCATGCCTAAAAATCT 59.847 34.615 0.00 0.00 36.45 2.40
132 133 6.329496 TGTTCGATTTCCATGCCTAAAAATC 58.671 36.000 0.00 0.00 35.67 2.17
133 134 6.279513 TGTTCGATTTCCATGCCTAAAAAT 57.720 33.333 0.00 0.00 0.00 1.82
134 135 5.713792 TGTTCGATTTCCATGCCTAAAAA 57.286 34.783 0.00 0.00 0.00 1.94
135 136 5.913137 ATGTTCGATTTCCATGCCTAAAA 57.087 34.783 0.00 0.00 0.00 1.52
136 137 5.913137 AATGTTCGATTTCCATGCCTAAA 57.087 34.783 0.00 0.00 0.00 1.85
137 138 5.913137 AAATGTTCGATTTCCATGCCTAA 57.087 34.783 0.00 0.00 0.00 2.69
138 139 5.913137 AAAATGTTCGATTTCCATGCCTA 57.087 34.783 0.00 0.00 0.00 3.93
139 140 4.806640 AAAATGTTCGATTTCCATGCCT 57.193 36.364 0.00 0.00 0.00 4.75
140 141 4.928615 TGAAAAATGTTCGATTTCCATGCC 59.071 37.500 6.10 0.00 33.23 4.40
141 142 6.455913 CCATGAAAAATGTTCGATTTCCATGC 60.456 38.462 3.65 0.00 34.44 4.06
142 143 6.455913 GCCATGAAAAATGTTCGATTTCCATG 60.456 38.462 0.00 2.48 34.92 3.66
143 144 5.581874 GCCATGAAAAATGTTCGATTTCCAT 59.418 36.000 0.00 0.00 33.23 3.41
144 145 4.928615 GCCATGAAAAATGTTCGATTTCCA 59.071 37.500 0.00 0.00 33.23 3.53
145 146 4.928615 TGCCATGAAAAATGTTCGATTTCC 59.071 37.500 0.00 0.00 33.23 3.13
146 147 6.464895 TTGCCATGAAAAATGTTCGATTTC 57.535 33.333 0.00 2.22 34.45 2.17
147 148 7.437793 AATTGCCATGAAAAATGTTCGATTT 57.562 28.000 0.00 0.00 0.00 2.17
148 149 7.437793 AAATTGCCATGAAAAATGTTCGATT 57.562 28.000 0.00 0.00 0.00 3.34
149 150 8.605746 CATAAATTGCCATGAAAAATGTTCGAT 58.394 29.630 0.00 0.00 0.00 3.59
150 151 7.601886 ACATAAATTGCCATGAAAAATGTTCGA 59.398 29.630 0.00 0.00 0.00 3.71
151 152 7.741198 ACATAAATTGCCATGAAAAATGTTCG 58.259 30.769 0.00 0.00 0.00 3.95
152 153 9.332301 CAACATAAATTGCCATGAAAAATGTTC 57.668 29.630 0.00 0.00 33.92 3.18
153 154 9.064706 TCAACATAAATTGCCATGAAAAATGTT 57.935 25.926 0.00 4.62 35.92 2.71
154 155 8.618702 TCAACATAAATTGCCATGAAAAATGT 57.381 26.923 0.00 0.00 0.00 2.71
155 156 9.497030 CATCAACATAAATTGCCATGAAAAATG 57.503 29.630 0.00 0.00 0.00 2.32
156 157 8.185505 GCATCAACATAAATTGCCATGAAAAAT 58.814 29.630 0.00 0.00 0.00 1.82
157 158 7.528307 GCATCAACATAAATTGCCATGAAAAA 58.472 30.769 0.00 0.00 0.00 1.94
158 159 6.183360 CGCATCAACATAAATTGCCATGAAAA 60.183 34.615 0.00 0.00 0.00 2.29
159 160 5.291371 CGCATCAACATAAATTGCCATGAAA 59.709 36.000 0.00 0.00 0.00 2.69
160 161 4.804665 CGCATCAACATAAATTGCCATGAA 59.195 37.500 0.00 0.00 0.00 2.57
161 162 4.361420 CGCATCAACATAAATTGCCATGA 58.639 39.130 0.00 0.00 0.00 3.07
162 163 3.491639 CCGCATCAACATAAATTGCCATG 59.508 43.478 0.00 0.00 0.00 3.66
163 164 3.493002 CCCGCATCAACATAAATTGCCAT 60.493 43.478 0.00 0.00 0.00 4.40
164 165 2.159128 CCCGCATCAACATAAATTGCCA 60.159 45.455 0.00 0.00 0.00 4.92
165 166 2.472816 CCCGCATCAACATAAATTGCC 58.527 47.619 0.00 0.00 0.00 4.52
166 167 2.100584 TCCCCGCATCAACATAAATTGC 59.899 45.455 0.00 0.00 0.00 3.56
167 168 4.300803 CATCCCCGCATCAACATAAATTG 58.699 43.478 0.00 0.00 0.00 2.32
168 169 3.321682 CCATCCCCGCATCAACATAAATT 59.678 43.478 0.00 0.00 0.00 1.82
169 170 2.892852 CCATCCCCGCATCAACATAAAT 59.107 45.455 0.00 0.00 0.00 1.40
170 171 2.305928 CCATCCCCGCATCAACATAAA 58.694 47.619 0.00 0.00 0.00 1.40
171 172 1.979855 CCATCCCCGCATCAACATAA 58.020 50.000 0.00 0.00 0.00 1.90
172 173 0.537143 GCCATCCCCGCATCAACATA 60.537 55.000 0.00 0.00 0.00 2.29
173 174 1.829533 GCCATCCCCGCATCAACAT 60.830 57.895 0.00 0.00 0.00 2.71
174 175 2.440065 GCCATCCCCGCATCAACA 60.440 61.111 0.00 0.00 0.00 3.33
175 176 1.603236 TTTGCCATCCCCGCATCAAC 61.603 55.000 0.00 0.00 35.83 3.18
176 177 0.687098 ATTTGCCATCCCCGCATCAA 60.687 50.000 0.00 0.00 35.83 2.57
177 178 0.687098 AATTTGCCATCCCCGCATCA 60.687 50.000 0.00 0.00 35.83 3.07
178 179 0.465287 AAATTTGCCATCCCCGCATC 59.535 50.000 0.00 0.00 35.83 3.91
179 180 1.688197 CTAAATTTGCCATCCCCGCAT 59.312 47.619 0.00 0.00 35.83 4.73
180 181 1.110442 CTAAATTTGCCATCCCCGCA 58.890 50.000 0.00 0.00 0.00 5.69
181 182 1.111277 ACTAAATTTGCCATCCCCGC 58.889 50.000 0.00 0.00 0.00 6.13
182 183 3.243401 GCTAACTAAATTTGCCATCCCCG 60.243 47.826 0.00 0.00 33.45 5.73
183 184 3.704061 TGCTAACTAAATTTGCCATCCCC 59.296 43.478 0.00 0.00 38.16 4.81
184 185 5.337578 TTGCTAACTAAATTTGCCATCCC 57.662 39.130 0.00 0.00 38.16 3.85
185 186 4.805719 GCTTGCTAACTAAATTTGCCATCC 59.194 41.667 0.00 0.00 38.16 3.51
186 187 5.410067 TGCTTGCTAACTAAATTTGCCATC 58.590 37.500 0.00 0.00 38.16 3.51
187 188 5.404466 TGCTTGCTAACTAAATTTGCCAT 57.596 34.783 0.00 0.00 38.16 4.40
188 189 4.862902 TGCTTGCTAACTAAATTTGCCA 57.137 36.364 0.00 0.00 38.16 4.92
189 190 4.567959 CCATGCTTGCTAACTAAATTTGCC 59.432 41.667 0.00 0.00 38.16 4.52
190 191 4.033243 GCCATGCTTGCTAACTAAATTTGC 59.967 41.667 0.00 0.00 39.25 3.68
191 192 5.170021 TGCCATGCTTGCTAACTAAATTTG 58.830 37.500 0.00 0.00 0.00 2.32
192 193 5.404466 TGCCATGCTTGCTAACTAAATTT 57.596 34.783 0.00 0.00 0.00 1.82
193 194 5.404466 TTGCCATGCTTGCTAACTAAATT 57.596 34.783 0.00 0.00 0.00 1.82
194 195 5.603170 ATTGCCATGCTTGCTAACTAAAT 57.397 34.783 0.00 0.00 0.00 1.40
195 196 5.185635 AGAATTGCCATGCTTGCTAACTAAA 59.814 36.000 0.00 0.00 0.00 1.85
196 197 4.706476 AGAATTGCCATGCTTGCTAACTAA 59.294 37.500 0.00 0.00 0.00 2.24
197 198 4.272489 AGAATTGCCATGCTTGCTAACTA 58.728 39.130 0.00 0.00 0.00 2.24
198 199 3.094572 AGAATTGCCATGCTTGCTAACT 58.905 40.909 0.00 0.00 0.00 2.24
199 200 3.129988 AGAGAATTGCCATGCTTGCTAAC 59.870 43.478 0.00 0.00 0.00 2.34
200 201 3.129813 CAGAGAATTGCCATGCTTGCTAA 59.870 43.478 0.00 0.00 0.00 3.09
201 202 2.686405 CAGAGAATTGCCATGCTTGCTA 59.314 45.455 0.00 0.00 0.00 3.49
202 203 1.476891 CAGAGAATTGCCATGCTTGCT 59.523 47.619 0.00 0.00 0.00 3.91
203 204 1.470979 CCAGAGAATTGCCATGCTTGC 60.471 52.381 0.00 0.00 0.00 4.01
204 205 1.470979 GCCAGAGAATTGCCATGCTTG 60.471 52.381 0.00 0.00 0.00 4.01
205 206 0.822164 GCCAGAGAATTGCCATGCTT 59.178 50.000 0.00 0.00 0.00 3.91
206 207 0.323999 TGCCAGAGAATTGCCATGCT 60.324 50.000 0.00 0.00 0.00 3.79
207 208 0.533491 TTGCCAGAGAATTGCCATGC 59.467 50.000 0.00 0.00 0.00 4.06
208 209 3.322211 TTTTGCCAGAGAATTGCCATG 57.678 42.857 0.00 0.00 0.00 3.66
227 228 5.336451 GGCAAATCCGACCTAGTTCATTTTT 60.336 40.000 0.00 0.00 0.00 1.94
228 229 4.157840 GGCAAATCCGACCTAGTTCATTTT 59.842 41.667 0.00 0.00 0.00 1.82
229 230 3.694566 GGCAAATCCGACCTAGTTCATTT 59.305 43.478 0.00 0.00 0.00 2.32
230 231 3.279434 GGCAAATCCGACCTAGTTCATT 58.721 45.455 0.00 0.00 0.00 2.57
231 232 2.238646 TGGCAAATCCGACCTAGTTCAT 59.761 45.455 0.00 0.00 37.80 2.57
232 233 1.626321 TGGCAAATCCGACCTAGTTCA 59.374 47.619 0.00 0.00 37.80 3.18
233 234 2.396590 TGGCAAATCCGACCTAGTTC 57.603 50.000 0.00 0.00 37.80 3.01
234 235 3.454812 AGTATGGCAAATCCGACCTAGTT 59.545 43.478 0.00 0.00 37.80 2.24
235 236 3.039011 AGTATGGCAAATCCGACCTAGT 58.961 45.455 0.00 0.00 37.80 2.57
236 237 3.654414 GAGTATGGCAAATCCGACCTAG 58.346 50.000 0.00 0.00 37.80 3.02
237 238 2.035449 CGAGTATGGCAAATCCGACCTA 59.965 50.000 0.00 0.00 37.80 3.08
238 239 1.202533 CGAGTATGGCAAATCCGACCT 60.203 52.381 0.00 0.00 37.80 3.85
239 240 1.217882 CGAGTATGGCAAATCCGACC 58.782 55.000 0.00 0.00 37.80 4.79
240 241 1.859080 GACGAGTATGGCAAATCCGAC 59.141 52.381 9.10 0.95 37.80 4.79
241 242 1.478916 TGACGAGTATGGCAAATCCGA 59.521 47.619 9.10 0.00 37.80 4.55
242 243 1.934589 TGACGAGTATGGCAAATCCG 58.065 50.000 0.00 0.00 37.80 4.18
243 244 3.270877 AGTTGACGAGTATGGCAAATCC 58.729 45.455 0.00 0.00 0.00 3.01
244 245 6.092259 AGTTTAGTTGACGAGTATGGCAAATC 59.908 38.462 0.00 0.00 0.00 2.17
245 246 5.938125 AGTTTAGTTGACGAGTATGGCAAAT 59.062 36.000 0.00 0.00 0.00 2.32
246 247 5.302360 AGTTTAGTTGACGAGTATGGCAAA 58.698 37.500 0.00 0.00 0.00 3.68
247 248 4.890088 AGTTTAGTTGACGAGTATGGCAA 58.110 39.130 0.00 0.00 0.00 4.52
248 249 4.530710 AGTTTAGTTGACGAGTATGGCA 57.469 40.909 0.00 0.00 0.00 4.92
249 250 6.755141 TGATAAGTTTAGTTGACGAGTATGGC 59.245 38.462 0.00 0.00 0.00 4.40
250 251 8.873215 ATGATAAGTTTAGTTGACGAGTATGG 57.127 34.615 0.00 0.00 0.00 2.74
253 254 9.784680 GAGAATGATAAGTTTAGTTGACGAGTA 57.215 33.333 0.00 0.00 0.00 2.59
254 255 7.485277 CGAGAATGATAAGTTTAGTTGACGAGT 59.515 37.037 0.00 0.00 0.00 4.18
255 256 7.043986 CCGAGAATGATAAGTTTAGTTGACGAG 60.044 40.741 0.00 0.00 0.00 4.18
256 257 6.750501 CCGAGAATGATAAGTTTAGTTGACGA 59.249 38.462 0.00 0.00 0.00 4.20
257 258 6.508088 GCCGAGAATGATAAGTTTAGTTGACG 60.508 42.308 0.00 0.00 0.00 4.35
258 259 6.312918 TGCCGAGAATGATAAGTTTAGTTGAC 59.687 38.462 0.00 0.00 0.00 3.18
259 260 6.403049 TGCCGAGAATGATAAGTTTAGTTGA 58.597 36.000 0.00 0.00 0.00 3.18
260 261 6.662414 TGCCGAGAATGATAAGTTTAGTTG 57.338 37.500 0.00 0.00 0.00 3.16
261 262 7.174253 TGTTTGCCGAGAATGATAAGTTTAGTT 59.826 33.333 0.00 0.00 0.00 2.24
262 263 6.653320 TGTTTGCCGAGAATGATAAGTTTAGT 59.347 34.615 0.00 0.00 0.00 2.24
263 264 7.072177 TGTTTGCCGAGAATGATAAGTTTAG 57.928 36.000 0.00 0.00 0.00 1.85
264 265 7.624360 ATGTTTGCCGAGAATGATAAGTTTA 57.376 32.000 0.00 0.00 0.00 2.01
265 266 5.957842 TGTTTGCCGAGAATGATAAGTTT 57.042 34.783 0.00 0.00 0.00 2.66
266 267 7.624360 TTATGTTTGCCGAGAATGATAAGTT 57.376 32.000 0.00 0.00 0.00 2.66
267 268 7.807977 ATTATGTTTGCCGAGAATGATAAGT 57.192 32.000 0.00 0.00 0.00 2.24
268 269 8.961092 CAAATTATGTTTGCCGAGAATGATAAG 58.039 33.333 0.00 0.00 0.00 1.73
269 270 7.434897 GCAAATTATGTTTGCCGAGAATGATAA 59.565 33.333 15.56 0.00 46.51 1.75
270 271 6.917477 GCAAATTATGTTTGCCGAGAATGATA 59.083 34.615 15.56 0.00 46.51 2.15
271 272 5.750067 GCAAATTATGTTTGCCGAGAATGAT 59.250 36.000 15.56 0.00 46.51 2.45
272 273 5.101628 GCAAATTATGTTTGCCGAGAATGA 58.898 37.500 15.56 0.00 46.51 2.57
273 274 5.379757 GCAAATTATGTTTGCCGAGAATG 57.620 39.130 15.56 0.00 46.51 2.67
282 283 7.517321 ACGCTTTTTATGGCAAATTATGTTTG 58.483 30.769 0.00 2.12 0.00 2.93
283 284 7.665561 ACGCTTTTTATGGCAAATTATGTTT 57.334 28.000 0.00 0.00 0.00 2.83
284 285 7.602265 AGAACGCTTTTTATGGCAAATTATGTT 59.398 29.630 0.00 0.00 0.00 2.71
285 286 7.096551 AGAACGCTTTTTATGGCAAATTATGT 58.903 30.769 0.00 0.00 0.00 2.29
286 287 7.524294 AGAACGCTTTTTATGGCAAATTATG 57.476 32.000 0.00 0.00 0.00 1.90
287 288 9.816354 AATAGAACGCTTTTTATGGCAAATTAT 57.184 25.926 0.00 0.00 0.00 1.28
288 289 9.646427 AAATAGAACGCTTTTTATGGCAAATTA 57.354 25.926 0.00 0.00 0.00 1.40
289 290 8.442384 CAAATAGAACGCTTTTTATGGCAAATT 58.558 29.630 0.00 0.00 0.00 1.82
290 291 7.816995 TCAAATAGAACGCTTTTTATGGCAAAT 59.183 29.630 0.00 0.00 0.00 2.32
291 292 7.115663 GTCAAATAGAACGCTTTTTATGGCAAA 59.884 33.333 0.00 0.00 0.00 3.68
292 293 6.584563 GTCAAATAGAACGCTTTTTATGGCAA 59.415 34.615 0.00 0.00 0.00 4.52
293 294 6.090129 GTCAAATAGAACGCTTTTTATGGCA 58.910 36.000 0.00 0.00 0.00 4.92
294 295 6.090129 TGTCAAATAGAACGCTTTTTATGGC 58.910 36.000 0.00 0.00 0.00 4.40
295 296 7.253750 GCATGTCAAATAGAACGCTTTTTATGG 60.254 37.037 0.00 0.00 0.00 2.74
296 297 7.253750 GGCATGTCAAATAGAACGCTTTTTATG 60.254 37.037 0.00 0.00 0.00 1.90
297 298 6.751888 GGCATGTCAAATAGAACGCTTTTTAT 59.248 34.615 0.00 0.00 0.00 1.40
298 299 6.072175 AGGCATGTCAAATAGAACGCTTTTTA 60.072 34.615 0.00 0.00 0.00 1.52
299 300 4.923281 GGCATGTCAAATAGAACGCTTTTT 59.077 37.500 0.00 0.00 0.00 1.94
300 301 4.218417 AGGCATGTCAAATAGAACGCTTTT 59.782 37.500 0.00 0.00 0.00 2.27
301 302 3.758554 AGGCATGTCAAATAGAACGCTTT 59.241 39.130 0.00 0.00 0.00 3.51
302 303 3.347216 AGGCATGTCAAATAGAACGCTT 58.653 40.909 0.00 0.00 0.00 4.68
303 304 2.991250 AGGCATGTCAAATAGAACGCT 58.009 42.857 0.00 0.00 0.00 5.07
304 305 4.875544 TTAGGCATGTCAAATAGAACGC 57.124 40.909 0.00 0.00 0.00 4.84
305 306 8.184192 AGATTTTTAGGCATGTCAAATAGAACG 58.816 33.333 0.00 0.00 0.00 3.95
306 307 9.294030 CAGATTTTTAGGCATGTCAAATAGAAC 57.706 33.333 0.00 0.00 0.00 3.01
307 308 9.241919 TCAGATTTTTAGGCATGTCAAATAGAA 57.758 29.630 0.00 0.00 0.00 2.10
308 309 8.677300 GTCAGATTTTTAGGCATGTCAAATAGA 58.323 33.333 0.00 0.00 0.00 1.98
309 310 7.641411 CGTCAGATTTTTAGGCATGTCAAATAG 59.359 37.037 0.00 0.00 0.00 1.73
310 311 7.120579 ACGTCAGATTTTTAGGCATGTCAAATA 59.879 33.333 0.00 0.00 0.00 1.40
311 312 6.071952 ACGTCAGATTTTTAGGCATGTCAAAT 60.072 34.615 0.00 0.00 0.00 2.32
312 313 5.240623 ACGTCAGATTTTTAGGCATGTCAAA 59.759 36.000 0.00 0.00 0.00 2.69
313 314 4.759693 ACGTCAGATTTTTAGGCATGTCAA 59.240 37.500 0.00 0.00 0.00 3.18
314 315 4.323417 ACGTCAGATTTTTAGGCATGTCA 58.677 39.130 0.00 0.00 0.00 3.58
315 316 4.946784 ACGTCAGATTTTTAGGCATGTC 57.053 40.909 0.00 0.00 0.00 3.06
316 317 4.142902 CGAACGTCAGATTTTTAGGCATGT 60.143 41.667 0.00 0.00 0.00 3.21
317 318 4.142902 ACGAACGTCAGATTTTTAGGCATG 60.143 41.667 0.00 0.00 0.00 4.06
318 319 4.000988 ACGAACGTCAGATTTTTAGGCAT 58.999 39.130 0.00 0.00 0.00 4.40
319 320 3.395639 ACGAACGTCAGATTTTTAGGCA 58.604 40.909 0.00 0.00 0.00 4.75
320 321 4.148891 CAACGAACGTCAGATTTTTAGGC 58.851 43.478 0.00 0.00 0.00 3.93
321 322 4.449743 TCCAACGAACGTCAGATTTTTAGG 59.550 41.667 0.00 0.00 0.00 2.69
322 323 5.585500 TCCAACGAACGTCAGATTTTTAG 57.415 39.130 0.00 0.00 0.00 1.85
323 324 7.837202 ATATCCAACGAACGTCAGATTTTTA 57.163 32.000 13.99 1.88 0.00 1.52
324 325 6.737254 ATATCCAACGAACGTCAGATTTTT 57.263 33.333 13.99 2.63 0.00 1.94
325 326 6.455113 CGAATATCCAACGAACGTCAGATTTT 60.455 38.462 13.99 12.67 0.00 1.82
326 327 5.005394 CGAATATCCAACGAACGTCAGATTT 59.995 40.000 13.99 6.90 0.00 2.17
327 328 4.503007 CGAATATCCAACGAACGTCAGATT 59.497 41.667 13.99 5.78 0.00 2.40
328 329 4.042398 CGAATATCCAACGAACGTCAGAT 58.958 43.478 13.51 13.51 0.00 2.90
329 330 3.431856 CGAATATCCAACGAACGTCAGA 58.568 45.455 0.00 1.34 0.00 3.27
330 331 2.534349 CCGAATATCCAACGAACGTCAG 59.466 50.000 0.00 0.00 0.00 3.51
331 332 2.164017 TCCGAATATCCAACGAACGTCA 59.836 45.455 0.00 0.00 0.00 4.35
332 333 2.801063 TCCGAATATCCAACGAACGTC 58.199 47.619 0.00 0.00 0.00 4.34
333 334 2.945447 TCCGAATATCCAACGAACGT 57.055 45.000 0.00 0.00 0.00 3.99
334 335 3.639538 AGATCCGAATATCCAACGAACG 58.360 45.455 0.00 0.00 0.00 3.95
335 336 7.599245 AGAATTAGATCCGAATATCCAACGAAC 59.401 37.037 0.00 0.00 0.00 3.95
336 337 7.667557 AGAATTAGATCCGAATATCCAACGAA 58.332 34.615 0.00 0.00 0.00 3.85
337 338 7.228314 AGAATTAGATCCGAATATCCAACGA 57.772 36.000 0.00 0.00 0.00 3.85
338 339 7.891183 AAGAATTAGATCCGAATATCCAACG 57.109 36.000 0.00 0.00 0.00 4.10
341 342 9.720769 GGTAAAAGAATTAGATCCGAATATCCA 57.279 33.333 0.00 0.00 0.00 3.41
342 343 9.945904 AGGTAAAAGAATTAGATCCGAATATCC 57.054 33.333 0.00 0.00 0.00 2.59
344 345 9.726438 CCAGGTAAAAGAATTAGATCCGAATAT 57.274 33.333 0.00 0.00 0.00 1.28
345 346 7.660208 GCCAGGTAAAAGAATTAGATCCGAATA 59.340 37.037 0.00 0.00 0.00 1.75
346 347 6.486993 GCCAGGTAAAAGAATTAGATCCGAAT 59.513 38.462 0.00 0.00 0.00 3.34
347 348 5.820947 GCCAGGTAAAAGAATTAGATCCGAA 59.179 40.000 0.00 0.00 0.00 4.30
348 349 5.130477 AGCCAGGTAAAAGAATTAGATCCGA 59.870 40.000 0.00 0.00 0.00 4.55
349 350 5.368989 AGCCAGGTAAAAGAATTAGATCCG 58.631 41.667 0.00 0.00 0.00 4.18
350 351 6.937465 CCTAGCCAGGTAAAAGAATTAGATCC 59.063 42.308 0.00 0.00 37.15 3.36
351 352 7.736893 TCCTAGCCAGGTAAAAGAATTAGATC 58.263 38.462 0.00 0.00 43.18 2.75
352 353 7.691993 TCCTAGCCAGGTAAAAGAATTAGAT 57.308 36.000 0.00 0.00 43.18 1.98
353 354 7.182206 ACTTCCTAGCCAGGTAAAAGAATTAGA 59.818 37.037 5.34 0.00 43.18 2.10
354 355 7.339482 ACTTCCTAGCCAGGTAAAAGAATTAG 58.661 38.462 5.34 0.00 43.18 1.73
355 356 7.266905 ACTTCCTAGCCAGGTAAAAGAATTA 57.733 36.000 5.34 0.00 43.18 1.40
356 357 6.140968 ACTTCCTAGCCAGGTAAAAGAATT 57.859 37.500 5.34 0.00 43.18 2.17
357 358 5.780958 ACTTCCTAGCCAGGTAAAAGAAT 57.219 39.130 5.34 0.00 43.18 2.40
358 359 5.578157 AACTTCCTAGCCAGGTAAAAGAA 57.422 39.130 5.34 0.00 43.18 2.52
359 360 5.578157 AAACTTCCTAGCCAGGTAAAAGA 57.422 39.130 5.34 0.00 43.18 2.52
360 361 5.768164 TGAAAACTTCCTAGCCAGGTAAAAG 59.232 40.000 0.00 0.00 43.18 2.27
361 362 5.697067 TGAAAACTTCCTAGCCAGGTAAAA 58.303 37.500 0.00 0.00 43.18 1.52
362 363 5.313280 TGAAAACTTCCTAGCCAGGTAAA 57.687 39.130 0.00 0.00 43.18 2.01
363 364 4.986054 TGAAAACTTCCTAGCCAGGTAA 57.014 40.909 0.00 0.00 43.18 2.85
364 365 4.986054 TTGAAAACTTCCTAGCCAGGTA 57.014 40.909 0.00 0.00 43.18 3.08
365 366 3.876309 TTGAAAACTTCCTAGCCAGGT 57.124 42.857 0.00 0.00 43.18 4.00
366 367 6.122277 TCATATTGAAAACTTCCTAGCCAGG 58.878 40.000 0.00 0.00 44.17 4.45
367 368 7.646314 CATCATATTGAAAACTTCCTAGCCAG 58.354 38.462 0.00 0.00 0.00 4.85
368 369 6.039717 GCATCATATTGAAAACTTCCTAGCCA 59.960 38.462 0.00 0.00 0.00 4.75
369 370 6.039717 TGCATCATATTGAAAACTTCCTAGCC 59.960 38.462 0.00 0.00 0.00 3.93
370 371 7.031226 TGCATCATATTGAAAACTTCCTAGC 57.969 36.000 0.00 0.00 0.00 3.42
371 372 9.859427 TTTTGCATCATATTGAAAACTTCCTAG 57.141 29.630 0.00 0.00 0.00 3.02
373 374 9.374838 GATTTTGCATCATATTGAAAACTTCCT 57.625 29.630 0.00 0.00 0.00 3.36
374 375 9.153721 TGATTTTGCATCATATTGAAAACTTCC 57.846 29.630 0.00 0.00 0.00 3.46
411 412 9.733556 ACATGTGATTGACTTTTGGTATACTTA 57.266 29.630 0.00 0.00 0.00 2.24
412 413 8.635765 ACATGTGATTGACTTTTGGTATACTT 57.364 30.769 0.00 0.00 0.00 2.24
413 414 8.514594 CAACATGTGATTGACTTTTGGTATACT 58.485 33.333 0.00 0.00 0.00 2.12
414 415 8.511321 TCAACATGTGATTGACTTTTGGTATAC 58.489 33.333 0.00 0.00 31.11 1.47
415 416 8.628630 TCAACATGTGATTGACTTTTGGTATA 57.371 30.769 0.00 0.00 31.11 1.47
416 417 7.523293 TCAACATGTGATTGACTTTTGGTAT 57.477 32.000 0.00 0.00 31.11 2.73
417 418 6.951062 TCAACATGTGATTGACTTTTGGTA 57.049 33.333 0.00 0.00 31.11 3.25
418 419 5.850557 TCAACATGTGATTGACTTTTGGT 57.149 34.783 0.00 0.00 31.11 3.67
458 459 9.654663 GTTCATATACAAGAAAGTCAACCTAGT 57.345 33.333 0.00 0.00 0.00 2.57
459 460 9.653287 TGTTCATATACAAGAAAGTCAACCTAG 57.347 33.333 0.00 0.00 0.00 3.02
461 462 8.918202 TTGTTCATATACAAGAAAGTCAACCT 57.082 30.769 0.00 0.00 33.31 3.50
473 474 7.265673 GGAGTAGCACTCTTGTTCATATACAA 58.734 38.462 13.59 0.00 44.46 2.41
474 475 6.183360 GGGAGTAGCACTCTTGTTCATATACA 60.183 42.308 13.59 0.00 44.46 2.29
475 476 6.041069 AGGGAGTAGCACTCTTGTTCATATAC 59.959 42.308 13.59 0.00 44.46 1.47
476 477 6.136857 AGGGAGTAGCACTCTTGTTCATATA 58.863 40.000 13.59 0.00 44.46 0.86
477 478 4.965532 AGGGAGTAGCACTCTTGTTCATAT 59.034 41.667 13.59 0.00 44.46 1.78
478 479 4.353777 AGGGAGTAGCACTCTTGTTCATA 58.646 43.478 13.59 0.00 44.46 2.15
479 480 3.177228 AGGGAGTAGCACTCTTGTTCAT 58.823 45.455 13.59 0.00 44.46 2.57
480 481 2.563179 GAGGGAGTAGCACTCTTGTTCA 59.437 50.000 13.59 0.00 43.99 3.18
481 482 2.093921 GGAGGGAGTAGCACTCTTGTTC 60.094 54.545 13.59 7.98 46.66 3.18
482 483 1.903183 GGAGGGAGTAGCACTCTTGTT 59.097 52.381 13.59 1.44 46.66 2.83
483 484 1.562783 GGAGGGAGTAGCACTCTTGT 58.437 55.000 13.59 2.45 46.66 3.16
484 485 0.457851 CGGAGGGAGTAGCACTCTTG 59.542 60.000 13.59 0.00 46.66 3.02
485 486 0.039911 ACGGAGGGAGTAGCACTCTT 59.960 55.000 13.59 5.41 46.66 2.85
486 487 0.039911 AACGGAGGGAGTAGCACTCT 59.960 55.000 13.59 0.00 46.66 3.24
487 488 0.456628 GAACGGAGGGAGTAGCACTC 59.543 60.000 7.52 7.52 46.76 3.51
488 489 0.971447 GGAACGGAGGGAGTAGCACT 60.971 60.000 0.00 0.00 0.00 4.40
489 490 0.971447 AGGAACGGAGGGAGTAGCAC 60.971 60.000 0.00 0.00 0.00 4.40
490 491 0.627451 TAGGAACGGAGGGAGTAGCA 59.373 55.000 0.00 0.00 0.00 3.49
491 492 1.772836 TTAGGAACGGAGGGAGTAGC 58.227 55.000 0.00 0.00 0.00 3.58
492 493 7.450944 ACTTATATTTAGGAACGGAGGGAGTAG 59.549 40.741 0.00 0.00 0.00 2.57
493 494 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
494 495 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
495 496 6.667558 ACTTATATTTAGGAACGGAGGGAG 57.332 41.667 0.00 0.00 0.00 4.30
496 497 6.612456 TGAACTTATATTTAGGAACGGAGGGA 59.388 38.462 0.00 0.00 0.00 4.20
497 498 6.823497 TGAACTTATATTTAGGAACGGAGGG 58.177 40.000 0.00 0.00 0.00 4.30
545 546 8.914011 GCAACTATTCCCTTTGTTCCTAAATAT 58.086 33.333 0.00 0.00 0.00 1.28
546 547 8.113462 AGCAACTATTCCCTTTGTTCCTAAATA 58.887 33.333 0.00 0.00 0.00 1.40
547 548 6.954102 AGCAACTATTCCCTTTGTTCCTAAAT 59.046 34.615 0.00 0.00 0.00 1.40
548 549 6.311735 AGCAACTATTCCCTTTGTTCCTAAA 58.688 36.000 0.00 0.00 0.00 1.85
549 550 5.887754 AGCAACTATTCCCTTTGTTCCTAA 58.112 37.500 0.00 0.00 0.00 2.69
550 551 5.514500 AGCAACTATTCCCTTTGTTCCTA 57.486 39.130 0.00 0.00 0.00 2.94
551 552 4.388577 AGCAACTATTCCCTTTGTTCCT 57.611 40.909 0.00 0.00 0.00 3.36
552 553 6.584185 TTTAGCAACTATTCCCTTTGTTCC 57.416 37.500 0.00 0.00 0.00 3.62
553 554 6.586463 GCTTTTAGCAACTATTCCCTTTGTTC 59.414 38.462 0.00 0.00 41.89 3.18
554 555 6.455647 GCTTTTAGCAACTATTCCCTTTGTT 58.544 36.000 0.00 0.00 41.89 2.83
555 556 6.025749 GCTTTTAGCAACTATTCCCTTTGT 57.974 37.500 0.00 0.00 41.89 2.83
587 588 9.034544 GCCTCAATCGCTAAAATAATTTTGATT 57.965 29.630 0.00 1.82 34.19 2.57
601 602 3.462483 TTAAATCCGCCTCAATCGCTA 57.538 42.857 0.00 0.00 0.00 4.26
602 603 2.325583 TTAAATCCGCCTCAATCGCT 57.674 45.000 0.00 0.00 0.00 4.93
603 604 3.003275 TGATTTAAATCCGCCTCAATCGC 59.997 43.478 22.42 0.00 34.50 4.58
608 618 5.924356 TGTCTATGATTTAAATCCGCCTCA 58.076 37.500 22.42 14.16 34.50 3.86
635 645 8.890718 CCATCTGATAGTTATTGCTATTGGATG 58.109 37.037 14.60 14.60 38.53 3.51
705 715 8.200120 ACTAACCTAATAGTTAACCCGTGAATC 58.800 37.037 0.88 0.00 32.18 2.52
756 766 9.920946 ATAGGTAAGATAAATGCAAAGGAAAGA 57.079 29.630 0.00 0.00 0.00 2.52
792 805 9.612620 CAAAACATCAGTTACCAAAGAAGATAC 57.387 33.333 0.00 0.00 36.84 2.24
937 950 4.119442 CAATTTCTGCAAATCCCAGAGG 57.881 45.455 0.00 0.00 40.16 3.69
953 975 6.872670 TTTTCAACGTAAACTTCGCAATTT 57.127 29.167 0.00 0.00 0.00 1.82
1094 1383 1.277580 CCCCTGAGTCCATTGGCTCT 61.278 60.000 20.52 12.18 33.22 4.09
1097 1386 2.276740 CCCCCTGAGTCCATTGGC 59.723 66.667 0.00 0.00 0.00 4.52
1299 1603 2.743636 TCTAACAAACAGAGGAGGCG 57.256 50.000 0.00 0.00 0.00 5.52
1353 1659 1.999735 TGAAATCTTACGCGGCAGAAG 59.000 47.619 12.47 8.50 0.00 2.85
1390 1696 5.801350 TTCATGTGTAGACTAGCAAATGC 57.199 39.130 0.00 0.00 42.49 3.56
1419 1729 5.067805 GGTGCCCTAAATAAGGTGAATTCAG 59.932 44.000 8.80 0.00 44.90 3.02
1438 1748 3.275999 ACTTGTATATTGTTCCGGTGCC 58.724 45.455 0.00 0.00 0.00 5.01
1444 1754 8.547967 TGTCTTTCAGACTTGTATATTGTTCC 57.452 34.615 5.53 0.00 45.27 3.62
1505 1815 4.553330 ACTATTCACTCCACGGAACAAT 57.447 40.909 0.00 0.00 0.00 2.71
1528 1838 1.578206 GACTTCTCCCAAACTGCGCC 61.578 60.000 4.18 0.00 0.00 6.53
1534 1844 2.618709 CACAACAGGACTTCTCCCAAAC 59.381 50.000 0.00 0.00 37.25 2.93
1550 1860 4.271533 TCACGGTATTCAGTTTGACACAAC 59.728 41.667 0.00 0.00 0.00 3.32
1567 1878 7.064490 GCATCCAAAATTTAATTCAATCACGGT 59.936 33.333 0.00 0.00 0.00 4.83
1637 1948 9.578439 AATGAAGCAAGTAAGCAATAATCTTTC 57.422 29.630 0.00 0.00 36.85 2.62
1656 1967 4.201647 CGCAATTGGTTGATCAAATGAAGC 60.202 41.667 10.35 9.45 37.53 3.86
1979 2312 6.146510 TCACTTTTTCGATTATACACGCTGTT 59.853 34.615 0.00 0.00 0.00 3.16
1984 2317 6.397831 TGGTCACTTTTTCGATTATACACG 57.602 37.500 0.00 0.00 0.00 4.49
2027 2361 7.502226 TGAACACTGGAATGTATTGAAAGACTT 59.498 33.333 0.00 0.00 30.75 3.01
2075 2409 2.936498 CGCTGGTTATTACTCCACTTGG 59.064 50.000 0.00 0.00 0.00 3.61
2130 2464 3.274288 CCACTTTAGAGGATGCCAGAAC 58.726 50.000 0.00 0.00 0.00 3.01
2133 2467 1.561542 ACCCACTTTAGAGGATGCCAG 59.438 52.381 0.00 0.00 0.00 4.85
2151 2485 1.003116 CAGCGCAGAAATCATAGCACC 60.003 52.381 11.47 0.00 0.00 5.01
2181 2515 5.699097 TGGAATGTTTACAGCAAGTTACC 57.301 39.130 0.00 0.00 0.00 2.85
2228 2562 5.538053 ACCATCCAATGTTAACATGAACACA 59.462 36.000 21.46 4.00 41.93 3.72
2243 2577 4.339247 GTCGATTTCATCCAACCATCCAAT 59.661 41.667 0.00 0.00 0.00 3.16
2253 2587 3.200483 CTGCTGATGTCGATTTCATCCA 58.800 45.455 10.88 6.51 40.38 3.41
2254 2588 2.032204 GCTGCTGATGTCGATTTCATCC 60.032 50.000 10.88 3.06 40.38 3.51
2264 2598 1.434622 CGGATGTGGCTGCTGATGTC 61.435 60.000 0.00 0.00 0.00 3.06
2342 2678 3.986277 AGCTCTTTTGGCAAAAGTCATG 58.014 40.909 37.68 28.42 46.18 3.07
2364 2703 4.342378 GTGAGACAACAGATATAGAGGGCA 59.658 45.833 0.00 0.00 0.00 5.36
2366 2705 7.227873 TCTAGTGAGACAACAGATATAGAGGG 58.772 42.308 0.00 0.00 0.00 4.30
2395 2734 3.203161 TGACTCGATCTGTGAGTTTCG 57.797 47.619 3.64 0.00 46.29 3.46
2430 2769 5.055812 TCAAGGATTTTTGTGCAAATGTCC 58.944 37.500 15.21 15.21 35.86 4.02
2496 2845 3.096092 GGATTACATTTGGGCTGGAACA 58.904 45.455 0.00 0.00 0.00 3.18
2612 2961 1.617018 ATAGCTGACGGCAAGGCTCA 61.617 55.000 8.49 0.00 44.79 4.26
2619 2968 1.220749 GGTGGAATAGCTGACGGCA 59.779 57.895 9.39 0.00 44.79 5.69
2626 2975 0.995675 ATGGGGCTGGTGGAATAGCT 60.996 55.000 0.00 0.00 39.80 3.32
2630 2979 1.307647 GTCATGGGGCTGGTGGAAT 59.692 57.895 0.00 0.00 0.00 3.01
2635 2984 2.927856 TCACGTCATGGGGCTGGT 60.928 61.111 0.00 0.00 0.00 4.00
2793 3142 2.957402 TCAAGGAAGATGCAACCACT 57.043 45.000 0.00 0.00 0.00 4.00
2814 3163 3.505480 AGATACGAATCTAGGACGGGT 57.495 47.619 0.00 0.00 40.82 5.28
2895 3244 5.818887 TGATCTCCCATGAACTGAAAATCA 58.181 37.500 0.00 0.00 0.00 2.57
2960 3310 5.472478 CGATCCAAACATCCAGATCATGAAT 59.528 40.000 0.00 0.00 35.85 2.57
2997 3347 1.606668 GCAAAGTCGAACCACCATTCA 59.393 47.619 0.00 0.00 0.00 2.57
3080 3451 7.982761 TCCACCATACAAAGTTAAATAACGT 57.017 32.000 0.00 0.00 40.96 3.99
3081 3452 9.849166 AATTCCACCATACAAAGTTAAATAACG 57.151 29.630 0.00 0.00 40.96 3.18
3145 3516 1.334869 CTGAGTTTTCCCAGCACACAC 59.665 52.381 0.00 0.00 0.00 3.82
3146 3517 1.679139 CTGAGTTTTCCCAGCACACA 58.321 50.000 0.00 0.00 0.00 3.72
3199 3570 4.273235 CGCATACAGTAATTGCAGAATGGA 59.727 41.667 6.91 0.00 36.15 3.41
3405 3776 4.509970 CAGCCATATCAACCGTTCGATTTA 59.490 41.667 0.00 0.00 0.00 1.40
3529 3949 6.651225 GTCAGTTATAAGATAGATTGGCACCC 59.349 42.308 0.00 0.00 0.00 4.61
3555 3975 7.614494 CCAATGGATAACTGATGTTTTTCCTT 58.386 34.615 0.00 0.00 37.76 3.36
3819 4239 6.674419 AGAAGAACCCCTAACAGTTCATAGAT 59.326 38.462 5.76 0.00 43.89 1.98
3820 4240 6.023603 AGAAGAACCCCTAACAGTTCATAGA 58.976 40.000 5.76 0.00 43.89 1.98
3821 4241 6.155393 AGAGAAGAACCCCTAACAGTTCATAG 59.845 42.308 5.76 0.00 43.89 2.23
3822 4242 6.023603 AGAGAAGAACCCCTAACAGTTCATA 58.976 40.000 5.76 0.00 43.89 2.15
4227 4652 4.208047 GCTTCTGCAGAATAGTGACATACG 59.792 45.833 28.57 13.58 39.41 3.06
4364 4793 5.072329 TCTCTCATCAACCTGAAACTTCCTT 59.928 40.000 0.00 0.00 0.00 3.36
4406 4835 2.429610 TCATACCGCTGGAGAAGTAACC 59.570 50.000 1.50 0.00 0.00 2.85
4491 4928 8.984891 TCAACATCAGCGAATTCATTAATTTT 57.015 26.923 6.22 0.00 35.41 1.82
4606 5043 7.572523 ATTCAGTTTATTATTAGCTGCTGCA 57.427 32.000 18.42 0.88 42.74 4.41
4805 5242 3.306294 GGTTTCCCTCTGCCAAAAGAATG 60.306 47.826 0.00 0.00 0.00 2.67
4873 5310 0.747255 AGTCTGGATCGTTCGATGGG 59.253 55.000 12.42 3.10 0.00 4.00
4900 5337 3.380637 GCGAGGGTTAGTAGTCATCTTCA 59.619 47.826 0.00 0.00 0.00 3.02
4955 5392 3.973657 TGACACAAAGACGGAACTAGAC 58.026 45.455 0.00 0.00 0.00 2.59
4971 5408 4.421033 GCTAAAGCCTAAAGGTTGACAC 57.579 45.455 0.00 0.00 35.99 3.67
4994 5435 4.161189 TGGTTTGGATTTGCAAGAGAACAA 59.839 37.500 0.00 0.00 0.00 2.83
5021 5462 6.043243 GGGACATAATACAGGAGATTCCTCAA 59.957 42.308 0.00 0.00 45.66 3.02
5072 5516 3.966665 ACAGGAAAAGGCATGGAAAAGAA 59.033 39.130 0.00 0.00 0.00 2.52
5091 5535 7.759433 CCTTATATGTTACAAAGGGCAAAACAG 59.241 37.037 6.45 0.00 35.80 3.16
5381 5827 5.645497 CCATTATTTTTGCCCGAAAATTGGA 59.355 36.000 14.09 4.03 38.23 3.53
5450 5896 4.020573 TGTCATAGGTGAGGTGGTTAGTTG 60.021 45.833 0.00 0.00 34.36 3.16
5871 6318 7.016153 TCATGGTGTTTCTACCTCAGTTATT 57.984 36.000 0.00 0.00 41.43 1.40
6058 6511 7.234577 TCAGGGGTATGTTTTAGCAAATTCTTT 59.765 33.333 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.