Multiple sequence alignment - TraesCS6A01G272100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G272100 chr6A 100.000 2534 0 0 1 2534 498958318 498955785 0.000000e+00 4680.0
1 TraesCS6A01G272100 chr6A 85.408 233 24 4 2305 2534 523070196 523070421 1.520000e-57 233.0
2 TraesCS6A01G272100 chr6A 82.237 152 23 4 315 464 34075020 34075169 7.360000e-26 128.0
3 TraesCS6A01G272100 chr6A 79.532 171 27 7 2341 2506 414261383 414261216 5.730000e-22 115.0
4 TraesCS6A01G272100 chr6A 79.845 129 20 5 2352 2476 588366860 588366734 3.470000e-14 89.8
5 TraesCS6A01G272100 chr6D 91.848 1742 98 14 817 2534 356289643 356287922 0.000000e+00 2390.0
6 TraesCS6A01G272100 chr6D 89.247 372 28 8 431 791 356290253 356289883 2.970000e-124 455.0
7 TraesCS6A01G272100 chr6D 97.358 265 7 0 3 267 90377438 90377702 3.840000e-123 451.0
8 TraesCS6A01G272100 chr6D 95.906 171 7 0 266 436 356391957 356391787 6.900000e-71 278.0
9 TraesCS6A01G272100 chr5D 87.840 1620 148 30 928 2534 450785690 450784107 0.000000e+00 1855.0
10 TraesCS6A01G272100 chr5D 84.968 1397 187 14 927 2316 556144872 556143492 0.000000e+00 1395.0
11 TraesCS6A01G272100 chr5D 97.015 268 6 2 3 270 112199513 112199248 1.380000e-122 449.0
12 TraesCS6A01G272100 chr5D 96.324 272 9 1 3 274 378347716 378347446 1.790000e-121 446.0
13 TraesCS6A01G272100 chr5D 83.529 255 27 9 2287 2534 556143471 556143225 9.120000e-55 224.0
14 TraesCS6A01G272100 chr7B 86.967 1619 181 14 927 2534 497011089 497009490 0.000000e+00 1794.0
15 TraesCS6A01G272100 chr7B 86.156 1228 146 16 1089 2306 164541934 164543147 0.000000e+00 1304.0
16 TraesCS6A01G272100 chr7B 80.428 327 37 11 612 927 164511775 164512085 9.120000e-55 224.0
17 TraesCS6A01G272100 chr6B 87.028 1403 154 18 928 2316 555340057 555338669 0.000000e+00 1557.0
18 TraesCS6A01G272100 chr6B 88.000 325 38 1 267 590 537467863 537467539 1.420000e-102 383.0
19 TraesCS6A01G272100 chr6B 87.097 186 24 0 2349 2534 555338597 555338412 7.100000e-51 211.0
20 TraesCS6A01G272100 chr6B 77.739 283 47 9 266 538 645380076 645379800 2.610000e-35 159.0
21 TraesCS6A01G272100 chr3B 87.022 1387 158 15 929 2306 560337169 560335796 0.000000e+00 1544.0
22 TraesCS6A01G272100 chr3B 88.660 194 22 0 2341 2534 105951240 105951047 1.170000e-58 237.0
23 TraesCS6A01G272100 chr3B 87.692 195 22 2 2341 2534 560335690 560335497 2.540000e-55 226.0
24 TraesCS6A01G272100 chr3B 74.648 284 51 16 266 531 780693891 780693611 3.450000e-19 106.0
25 TraesCS6A01G272100 chr2D 83.042 1374 210 17 952 2316 505536944 505538303 0.000000e+00 1225.0
26 TraesCS6A01G272100 chr2D 82.727 1401 209 22 932 2316 596267795 596266412 0.000000e+00 1216.0
27 TraesCS6A01G272100 chr2D 85.714 189 23 4 2349 2534 505730661 505730848 1.990000e-46 196.0
28 TraesCS6A01G272100 chr2D 81.879 149 25 2 314 461 323636864 323637011 9.520000e-25 124.0
29 TraesCS6A01G272100 chr2D 83.206 131 15 4 401 531 334261689 334261812 2.060000e-21 113.0
30 TraesCS6A01G272100 chr2D 92.308 39 3 0 833 871 500616627 500616589 3.520000e-04 56.5
31 TraesCS6A01G272100 chr3D 82.609 1403 209 26 931 2316 382522575 382521191 0.000000e+00 1206.0
32 TraesCS6A01G272100 chr3D 82.692 156 20 4 315 469 525642855 525643004 5.690000e-27 132.0
33 TraesCS6A01G272100 chr3D 75.591 254 53 9 285 532 47238166 47237916 1.590000e-22 117.0
34 TraesCS6A01G272100 chr3D 78.235 170 30 6 2340 2505 484378280 484378446 4.460000e-18 102.0
35 TraesCS6A01G272100 chr7D 78.104 1603 291 43 928 2511 572729855 572728294 0.000000e+00 961.0
36 TraesCS6A01G272100 chr4D 76.933 1526 301 35 1009 2511 15933029 15931532 0.000000e+00 821.0
37 TraesCS6A01G272100 chr4D 95.668 277 9 1 1 277 380232930 380232657 2.310000e-120 442.0
38 TraesCS6A01G272100 chr4D 86.992 123 14 2 2414 2534 294340493 294340615 1.220000e-28 137.0
39 TraesCS6A01G272100 chr4D 96.491 57 1 1 477 532 363578162 363578106 2.680000e-15 93.5
40 TraesCS6A01G272100 chr5B 83.559 888 107 25 1682 2534 65289881 65290764 0.000000e+00 795.0
41 TraesCS6A01G272100 chr5B 83.333 144 22 2 322 464 144612439 144612297 5.690000e-27 132.0
42 TraesCS6A01G272100 chr1D 97.736 265 6 0 3 267 386929879 386929615 8.260000e-125 457.0
43 TraesCS6A01G272100 chr1D 94.737 57 2 1 478 533 485481451 485481507 1.250000e-13 87.9
44 TraesCS6A01G272100 chr4B 97.358 265 6 1 3 267 169633474 169633211 1.380000e-122 449.0
45 TraesCS6A01G272100 chr3A 97.358 265 6 1 3 267 442060979 442061242 1.380000e-122 449.0
46 TraesCS6A01G272100 chr3A 97.004 267 7 1 3 269 498291741 498291476 4.970000e-122 448.0
47 TraesCS6A01G272100 chr3A 79.532 171 29 4 315 482 471318749 471318582 1.590000e-22 117.0
48 TraesCS6A01G272100 chr3A 87.838 74 7 2 269 342 712695371 712695442 4.490000e-13 86.1
49 TraesCS6A01G272100 chr7A 97.004 267 7 1 1 267 487579665 487579400 4.970000e-122 448.0
50 TraesCS6A01G272100 chr7A 80.729 192 33 3 2340 2529 527197950 527197761 2.030000e-31 147.0
51 TraesCS6A01G272100 chr7A 76.303 211 32 12 336 531 195570262 195570055 2.070000e-16 97.1
52 TraesCS6A01G272100 chr1B 85.542 249 29 3 2287 2534 544737675 544737917 1.160000e-63 254.0
53 TraesCS6A01G272100 chr1B 82.317 164 22 6 2349 2508 523014703 523014863 4.400000e-28 135.0
54 TraesCS6A01G272100 chr4A 87.958 191 21 1 2341 2529 583808049 583808239 9.120000e-55 224.0
55 TraesCS6A01G272100 chr4A 82.162 185 28 4 266 449 693039580 693039760 1.210000e-33 154.0
56 TraesCS6A01G272100 chr1A 80.097 206 35 5 263 465 128636665 128636867 5.650000e-32 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G272100 chr6A 498955785 498958318 2533 True 4680.0 4680 100.0000 1 2534 1 chr6A.!!$R2 2533
1 TraesCS6A01G272100 chr6D 356287922 356290253 2331 True 1422.5 2390 90.5475 431 2534 2 chr6D.!!$R2 2103
2 TraesCS6A01G272100 chr5D 450784107 450785690 1583 True 1855.0 1855 87.8400 928 2534 1 chr5D.!!$R3 1606
3 TraesCS6A01G272100 chr5D 556143225 556144872 1647 True 809.5 1395 84.2485 927 2534 2 chr5D.!!$R4 1607
4 TraesCS6A01G272100 chr7B 497009490 497011089 1599 True 1794.0 1794 86.9670 927 2534 1 chr7B.!!$R1 1607
5 TraesCS6A01G272100 chr7B 164541934 164543147 1213 False 1304.0 1304 86.1560 1089 2306 1 chr7B.!!$F2 1217
6 TraesCS6A01G272100 chr6B 555338412 555340057 1645 True 884.0 1557 87.0625 928 2534 2 chr6B.!!$R3 1606
7 TraesCS6A01G272100 chr3B 560335497 560337169 1672 True 885.0 1544 87.3570 929 2534 2 chr3B.!!$R3 1605
8 TraesCS6A01G272100 chr2D 505536944 505538303 1359 False 1225.0 1225 83.0420 952 2316 1 chr2D.!!$F3 1364
9 TraesCS6A01G272100 chr2D 596266412 596267795 1383 True 1216.0 1216 82.7270 932 2316 1 chr2D.!!$R2 1384
10 TraesCS6A01G272100 chr3D 382521191 382522575 1384 True 1206.0 1206 82.6090 931 2316 1 chr3D.!!$R2 1385
11 TraesCS6A01G272100 chr7D 572728294 572729855 1561 True 961.0 961 78.1040 928 2511 1 chr7D.!!$R1 1583
12 TraesCS6A01G272100 chr4D 15931532 15933029 1497 True 821.0 821 76.9330 1009 2511 1 chr4D.!!$R1 1502
13 TraesCS6A01G272100 chr5B 65289881 65290764 883 False 795.0 795 83.5590 1682 2534 1 chr5B.!!$F1 852

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
365 366 0.02811 GATTCCGGCAATGTTCGCTC 59.972 55.0 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 1986 0.035152 CCCAGACAGCCAGCACATAA 60.035 55.0 0.0 0.0 0.0 1.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.753294 TGAAACTCTCCCTCAACACTC 57.247 47.619 0.00 0.00 0.00 3.51
22 23 2.035961 TGAAACTCTCCCTCAACACTCG 59.964 50.000 0.00 0.00 0.00 4.18
23 24 0.969894 AACTCTCCCTCAACACTCGG 59.030 55.000 0.00 0.00 0.00 4.63
24 25 1.216710 CTCTCCCTCAACACTCGGC 59.783 63.158 0.00 0.00 0.00 5.54
25 26 1.533033 TCTCCCTCAACACTCGGCA 60.533 57.895 0.00 0.00 0.00 5.69
26 27 1.079543 CTCCCTCAACACTCGGCAG 60.080 63.158 0.00 0.00 0.00 4.85
27 28 2.046892 CCCTCAACACTCGGCAGG 60.047 66.667 0.00 0.00 0.00 4.85
28 29 2.583441 CCCTCAACACTCGGCAGGA 61.583 63.158 0.00 0.00 0.00 3.86
29 30 1.599047 CCTCAACACTCGGCAGGAT 59.401 57.895 0.00 0.00 0.00 3.24
30 31 0.460987 CCTCAACACTCGGCAGGATC 60.461 60.000 0.00 0.00 0.00 3.36
31 32 0.803768 CTCAACACTCGGCAGGATCG 60.804 60.000 0.00 0.00 0.00 3.69
32 33 1.811266 CAACACTCGGCAGGATCGG 60.811 63.158 0.00 0.00 0.00 4.18
33 34 1.982395 AACACTCGGCAGGATCGGA 60.982 57.895 0.00 0.00 0.00 4.55
34 35 1.949847 AACACTCGGCAGGATCGGAG 61.950 60.000 0.00 0.00 38.77 4.63
35 36 2.043852 ACTCGGCAGGATCGGAGT 60.044 61.111 0.00 0.00 40.39 3.85
36 37 1.682684 ACTCGGCAGGATCGGAGTT 60.683 57.895 0.00 0.00 41.80 3.01
37 38 1.066587 CTCGGCAGGATCGGAGTTC 59.933 63.158 0.00 0.00 0.00 3.01
38 39 2.278857 CGGCAGGATCGGAGTTCG 60.279 66.667 0.00 0.00 40.90 3.95
46 47 4.757773 TCGGAGTTCGAGGGACAT 57.242 55.556 0.00 0.00 43.74 3.06
47 48 2.490165 TCGGAGTTCGAGGGACATC 58.510 57.895 0.00 0.00 43.74 3.06
48 49 0.323087 TCGGAGTTCGAGGGACATCA 60.323 55.000 0.00 0.00 43.74 3.07
49 50 0.747255 CGGAGTTCGAGGGACATCAT 59.253 55.000 0.00 0.00 42.43 2.45
50 51 1.269309 CGGAGTTCGAGGGACATCATC 60.269 57.143 0.00 0.00 42.43 2.92
51 52 1.269309 GGAGTTCGAGGGACATCATCG 60.269 57.143 0.00 0.00 37.79 3.84
52 53 0.747255 AGTTCGAGGGACATCATCGG 59.253 55.000 0.49 0.00 37.08 4.18
53 54 0.249489 GTTCGAGGGACATCATCGGG 60.249 60.000 0.49 0.00 37.08 5.14
54 55 2.028125 TTCGAGGGACATCATCGGGC 62.028 60.000 0.49 0.00 37.08 6.13
55 56 2.502492 CGAGGGACATCATCGGGCT 61.502 63.158 0.00 0.00 32.93 5.19
56 57 1.070445 GAGGGACATCATCGGGCTG 59.930 63.158 0.00 0.00 0.00 4.85
57 58 1.383109 AGGGACATCATCGGGCTGA 60.383 57.895 0.00 0.00 0.00 4.26
58 59 0.982852 AGGGACATCATCGGGCTGAA 60.983 55.000 0.00 0.00 0.00 3.02
59 60 0.815615 GGGACATCATCGGGCTGAAC 60.816 60.000 0.00 0.00 0.00 3.18
60 61 1.154205 GGACATCATCGGGCTGAACG 61.154 60.000 0.00 0.00 0.00 3.95
61 62 0.460284 GACATCATCGGGCTGAACGT 60.460 55.000 0.00 0.00 0.00 3.99
62 63 0.740868 ACATCATCGGGCTGAACGTG 60.741 55.000 0.00 1.86 0.00 4.49
63 64 0.740868 CATCATCGGGCTGAACGTGT 60.741 55.000 0.00 0.00 0.00 4.49
64 65 0.740868 ATCATCGGGCTGAACGTGTG 60.741 55.000 0.00 0.00 0.00 3.82
65 66 2.742372 ATCGGGCTGAACGTGTGC 60.742 61.111 0.00 0.00 0.00 4.57
66 67 3.240134 ATCGGGCTGAACGTGTGCT 62.240 57.895 0.00 0.00 0.00 4.40
67 68 3.716006 CGGGCTGAACGTGTGCTG 61.716 66.667 0.00 0.00 0.00 4.41
68 69 2.280797 GGGCTGAACGTGTGCTGA 60.281 61.111 0.00 0.00 0.00 4.26
69 70 1.891919 GGGCTGAACGTGTGCTGAA 60.892 57.895 0.00 0.00 0.00 3.02
70 71 1.279840 GGCTGAACGTGTGCTGAAC 59.720 57.895 0.00 0.00 0.00 3.18
71 72 1.160329 GGCTGAACGTGTGCTGAACT 61.160 55.000 0.00 0.00 0.00 3.01
72 73 0.233332 GCTGAACGTGTGCTGAACTC 59.767 55.000 0.00 0.00 0.00 3.01
76 77 3.848142 CGTGTGCTGAACTCGGAG 58.152 61.111 2.83 2.83 41.05 4.63
77 78 1.734477 CGTGTGCTGAACTCGGAGG 60.734 63.158 10.23 0.00 41.05 4.30
78 79 1.367840 GTGTGCTGAACTCGGAGGT 59.632 57.895 10.23 1.51 0.00 3.85
79 80 0.946221 GTGTGCTGAACTCGGAGGTG 60.946 60.000 10.23 0.00 0.00 4.00
80 81 2.029844 GTGCTGAACTCGGAGGTGC 61.030 63.158 10.23 4.15 0.00 5.01
81 82 2.435059 GCTGAACTCGGAGGTGCC 60.435 66.667 10.23 0.00 0.00 5.01
90 91 2.505557 GGAGGTGCCGTACGTTCG 60.506 66.667 15.21 7.68 0.00 3.95
102 103 2.444351 GTACGTTCGGTACTTGATCGG 58.556 52.381 17.26 0.00 46.50 4.18
103 104 0.883833 ACGTTCGGTACTTGATCGGT 59.116 50.000 17.26 0.00 33.92 4.69
104 105 1.135575 ACGTTCGGTACTTGATCGGTC 60.136 52.381 17.26 0.00 33.92 4.79
105 106 1.542544 GTTCGGTACTTGATCGGTCG 58.457 55.000 0.00 0.00 30.29 4.79
106 107 0.452987 TTCGGTACTTGATCGGTCGG 59.547 55.000 0.00 0.00 30.29 4.79
107 108 0.392863 TCGGTACTTGATCGGTCGGA 60.393 55.000 0.00 0.00 30.29 4.55
108 109 0.666913 CGGTACTTGATCGGTCGGAT 59.333 55.000 0.00 0.00 38.35 4.18
115 116 3.165559 GATCGGTCGGATCGTGAAG 57.834 57.895 10.85 0.00 42.02 3.02
116 117 0.661552 GATCGGTCGGATCGTGAAGA 59.338 55.000 10.85 0.00 42.02 2.87
117 118 0.381089 ATCGGTCGGATCGTGAAGAC 59.619 55.000 10.85 0.00 0.00 3.01
119 120 1.505353 GGTCGGATCGTGAAGACGT 59.495 57.895 0.00 0.00 46.20 4.34
120 121 0.729116 GGTCGGATCGTGAAGACGTA 59.271 55.000 0.00 0.00 46.20 3.57
121 122 1.332997 GGTCGGATCGTGAAGACGTAT 59.667 52.381 0.00 0.00 46.20 3.06
122 123 2.373269 GTCGGATCGTGAAGACGTATG 58.627 52.381 0.00 0.00 46.20 2.39
123 124 2.031314 GTCGGATCGTGAAGACGTATGA 59.969 50.000 0.00 0.00 46.20 2.15
124 125 2.031314 TCGGATCGTGAAGACGTATGAC 59.969 50.000 0.00 0.00 46.20 3.06
125 126 2.031807 CGGATCGTGAAGACGTATGACT 59.968 50.000 0.00 0.00 46.20 3.41
126 127 3.246936 CGGATCGTGAAGACGTATGACTA 59.753 47.826 0.00 0.00 46.20 2.59
127 128 4.525686 GGATCGTGAAGACGTATGACTAC 58.474 47.826 0.00 0.00 46.20 2.73
128 129 4.034858 GGATCGTGAAGACGTATGACTACA 59.965 45.833 0.00 0.00 46.20 2.74
129 130 5.277876 GGATCGTGAAGACGTATGACTACAT 60.278 44.000 0.00 0.00 46.20 2.29
130 131 5.152923 TCGTGAAGACGTATGACTACATC 57.847 43.478 0.00 0.00 46.20 3.06
131 132 4.632688 TCGTGAAGACGTATGACTACATCA 59.367 41.667 0.00 0.00 46.20 3.07
132 133 5.122711 TCGTGAAGACGTATGACTACATCAA 59.877 40.000 0.00 0.00 46.20 2.57
133 134 5.227391 CGTGAAGACGTATGACTACATCAAC 59.773 44.000 0.00 0.00 39.87 3.18
134 135 5.515626 GTGAAGACGTATGACTACATCAACC 59.484 44.000 0.00 0.00 41.93 3.77
135 136 4.288670 AGACGTATGACTACATCAACCG 57.711 45.455 0.00 0.00 41.93 4.44
136 137 2.787680 GACGTATGACTACATCAACCGC 59.212 50.000 0.00 0.00 41.93 5.68
137 138 1.779157 CGTATGACTACATCAACCGCG 59.221 52.381 0.00 0.00 41.93 6.46
138 139 2.793585 CGTATGACTACATCAACCGCGT 60.794 50.000 4.92 0.00 41.93 6.01
139 140 2.380084 ATGACTACATCAACCGCGTT 57.620 45.000 4.92 0.00 41.93 4.84
140 141 1.424403 TGACTACATCAACCGCGTTG 58.576 50.000 4.92 10.14 43.99 4.10
141 142 1.269883 TGACTACATCAACCGCGTTGT 60.270 47.619 16.97 9.99 43.23 3.32
142 143 1.126113 GACTACATCAACCGCGTTGTG 59.874 52.381 16.97 15.92 43.23 3.33
143 144 0.179225 CTACATCAACCGCGTTGTGC 60.179 55.000 16.97 0.00 43.23 4.57
144 145 0.601576 TACATCAACCGCGTTGTGCT 60.602 50.000 16.97 6.88 43.23 4.40
145 146 0.601576 ACATCAACCGCGTTGTGCTA 60.602 50.000 16.97 3.28 43.23 3.49
146 147 0.515127 CATCAACCGCGTTGTGCTAA 59.485 50.000 16.97 2.99 43.23 3.09
147 148 0.515564 ATCAACCGCGTTGTGCTAAC 59.484 50.000 16.97 0.00 43.23 2.34
148 149 1.438059 CAACCGCGTTGTGCTAACG 60.438 57.895 18.25 18.25 45.56 3.18
154 155 1.129809 CGTTGTGCTAACGCTTCCG 59.870 57.895 12.46 0.00 36.82 4.30
155 156 1.154469 GTTGTGCTAACGCTTCCGC 60.154 57.895 0.00 0.00 38.22 5.54
156 157 1.301401 TTGTGCTAACGCTTCCGCT 60.301 52.632 0.00 0.00 38.22 5.52
157 158 0.882927 TTGTGCTAACGCTTCCGCTT 60.883 50.000 0.00 0.00 38.22 4.68
158 159 0.882927 TGTGCTAACGCTTCCGCTTT 60.883 50.000 0.00 0.00 38.22 3.51
159 160 0.237498 GTGCTAACGCTTCCGCTTTT 59.763 50.000 0.00 0.00 38.22 2.27
160 161 0.237235 TGCTAACGCTTCCGCTTTTG 59.763 50.000 0.00 0.00 38.22 2.44
161 162 0.454452 GCTAACGCTTCCGCTTTTGG 60.454 55.000 0.00 0.00 38.22 3.28
162 163 0.872388 CTAACGCTTCCGCTTTTGGT 59.128 50.000 0.00 0.00 38.22 3.67
163 164 0.869730 TAACGCTTCCGCTTTTGGTC 59.130 50.000 0.00 0.00 38.22 4.02
164 165 0.818040 AACGCTTCCGCTTTTGGTCT 60.818 50.000 0.00 0.00 38.22 3.85
165 166 0.034337 ACGCTTCCGCTTTTGGTCTA 59.966 50.000 0.00 0.00 38.22 2.59
166 167 0.442699 CGCTTCCGCTTTTGGTCTAC 59.557 55.000 0.00 0.00 0.00 2.59
167 168 1.519408 GCTTCCGCTTTTGGTCTACA 58.481 50.000 0.00 0.00 0.00 2.74
168 169 1.877443 GCTTCCGCTTTTGGTCTACAA 59.123 47.619 0.00 0.00 37.28 2.41
169 170 2.095718 GCTTCCGCTTTTGGTCTACAAG 60.096 50.000 0.00 0.00 40.82 3.16
170 171 2.178912 TCCGCTTTTGGTCTACAAGG 57.821 50.000 0.00 0.00 40.82 3.61
171 172 1.165270 CCGCTTTTGGTCTACAAGGG 58.835 55.000 0.00 0.00 40.82 3.95
172 173 1.544759 CCGCTTTTGGTCTACAAGGGT 60.545 52.381 0.00 0.00 40.82 4.34
173 174 2.289819 CCGCTTTTGGTCTACAAGGGTA 60.290 50.000 0.00 0.00 40.82 3.69
174 175 2.740447 CGCTTTTGGTCTACAAGGGTAC 59.260 50.000 0.00 0.00 40.82 3.34
175 176 2.740447 GCTTTTGGTCTACAAGGGTACG 59.260 50.000 0.00 0.00 40.82 3.67
176 177 3.804759 GCTTTTGGTCTACAAGGGTACGT 60.805 47.826 0.00 0.00 40.82 3.57
177 178 4.561326 GCTTTTGGTCTACAAGGGTACGTA 60.561 45.833 0.00 0.00 40.82 3.57
178 179 4.789012 TTTGGTCTACAAGGGTACGTAG 57.211 45.455 0.00 0.00 40.82 3.51
179 180 3.719268 TGGTCTACAAGGGTACGTAGA 57.281 47.619 0.00 4.74 41.32 2.59
184 185 4.397420 TCTACAAGGGTACGTAGACAACA 58.603 43.478 0.00 0.00 39.28 3.33
185 186 3.375782 ACAAGGGTACGTAGACAACAC 57.624 47.619 0.00 0.00 0.00 3.32
186 187 2.961062 ACAAGGGTACGTAGACAACACT 59.039 45.455 0.00 0.00 0.00 3.55
187 188 3.005155 ACAAGGGTACGTAGACAACACTC 59.995 47.826 0.00 0.00 0.00 3.51
188 189 3.151912 AGGGTACGTAGACAACACTCT 57.848 47.619 0.00 0.00 0.00 3.24
189 190 3.080319 AGGGTACGTAGACAACACTCTC 58.920 50.000 0.00 0.00 0.00 3.20
190 191 2.163211 GGGTACGTAGACAACACTCTCC 59.837 54.545 0.00 0.00 0.00 3.71
191 192 2.163211 GGTACGTAGACAACACTCTCCC 59.837 54.545 0.00 0.00 0.00 4.30
192 193 1.254954 ACGTAGACAACACTCTCCCC 58.745 55.000 0.00 0.00 0.00 4.81
193 194 1.203025 ACGTAGACAACACTCTCCCCT 60.203 52.381 0.00 0.00 0.00 4.79
194 195 1.473278 CGTAGACAACACTCTCCCCTC 59.527 57.143 0.00 0.00 0.00 4.30
195 196 2.810164 GTAGACAACACTCTCCCCTCT 58.190 52.381 0.00 0.00 0.00 3.69
196 197 1.931635 AGACAACACTCTCCCCTCTC 58.068 55.000 0.00 0.00 0.00 3.20
197 198 0.528470 GACAACACTCTCCCCTCTCG 59.472 60.000 0.00 0.00 0.00 4.04
198 199 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
199 200 0.969894 CAACACTCTCCCCTCTCGTT 59.030 55.000 0.00 0.00 0.00 3.85
200 201 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
201 202 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
202 203 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
203 204 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
204 205 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
205 206 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
206 207 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
207 208 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
208 209 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
209 210 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
210 211 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
211 212 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
212 213 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
213 214 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
214 215 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
215 216 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
216 217 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
217 218 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
218 219 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
219 220 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
220 221 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
221 222 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
222 223 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
223 224 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
224 225 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
225 226 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
226 227 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
227 228 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
228 229 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
236 237 1.405526 ATCTTGCGTGTGCGTAGGATT 60.406 47.619 0.00 0.00 44.18 3.01
237 238 2.935238 ATCTTGCGTGTGCGTAGGATTT 60.935 45.455 0.00 0.00 44.18 2.17
238 239 4.419949 ATCTTGCGTGTGCGTAGGATTTT 61.420 43.478 0.00 0.00 44.18 1.82
239 240 5.865159 ATCTTGCGTGTGCGTAGGATTTTT 61.865 41.667 0.00 0.00 44.18 1.94
262 263 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
263 264 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
264 265 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
265 266 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
266 267 4.998672 TGAAATTACTACGTTCCCCAACAG 59.001 41.667 0.00 0.00 32.14 3.16
267 268 3.622166 ATTACTACGTTCCCCAACAGG 57.378 47.619 0.00 0.00 32.14 4.00
268 269 2.307496 TACTACGTTCCCCAACAGGA 57.693 50.000 0.00 0.00 38.24 3.86
269 270 0.683412 ACTACGTTCCCCAACAGGAC 59.317 55.000 0.00 0.00 38.24 3.85
270 271 0.682852 CTACGTTCCCCAACAGGACA 59.317 55.000 0.00 0.00 38.24 4.02
271 272 0.682852 TACGTTCCCCAACAGGACAG 59.317 55.000 0.00 0.00 38.24 3.51
272 273 1.342672 ACGTTCCCCAACAGGACAGT 61.343 55.000 0.00 0.00 38.24 3.55
273 274 0.884704 CGTTCCCCAACAGGACAGTG 60.885 60.000 0.00 0.00 38.24 3.66
274 275 0.537371 GTTCCCCAACAGGACAGTGG 60.537 60.000 0.00 0.00 38.24 4.00
275 276 0.991355 TTCCCCAACAGGACAGTGGT 60.991 55.000 0.00 0.00 38.24 4.16
276 277 0.104882 TCCCCAACAGGACAGTGGTA 60.105 55.000 0.00 0.00 38.24 3.25
277 278 0.991920 CCCCAACAGGACAGTGGTAT 59.008 55.000 0.00 0.00 38.24 2.73
278 279 1.065418 CCCCAACAGGACAGTGGTATC 60.065 57.143 0.00 0.00 38.24 2.24
279 280 1.628340 CCCAACAGGACAGTGGTATCA 59.372 52.381 0.00 0.00 38.24 2.15
280 281 2.615493 CCCAACAGGACAGTGGTATCAC 60.615 54.545 0.00 0.00 40.36 3.06
281 282 2.615493 CCAACAGGACAGTGGTATCACC 60.615 54.545 1.47 0.00 44.64 4.02
289 290 4.241769 TGGTATCACCAGCCACCA 57.758 55.556 0.00 0.00 44.79 4.17
290 291 1.990424 TGGTATCACCAGCCACCAG 59.010 57.895 0.00 0.00 44.79 4.00
291 292 1.224592 GGTATCACCAGCCACCAGG 59.775 63.158 0.00 0.00 38.42 4.45
292 293 1.224592 GTATCACCAGCCACCAGGG 59.775 63.158 0.00 0.00 40.85 4.45
294 295 0.844661 TATCACCAGCCACCAGGGTT 60.845 55.000 0.00 0.00 45.14 4.11
295 296 1.729267 ATCACCAGCCACCAGGGTTT 61.729 55.000 0.00 0.00 45.14 3.27
296 297 1.063070 TCACCAGCCACCAGGGTTTA 61.063 55.000 0.00 0.00 45.14 2.01
297 298 0.178975 CACCAGCCACCAGGGTTTAA 60.179 55.000 0.00 0.00 45.14 1.52
298 299 0.112412 ACCAGCCACCAGGGTTTAAG 59.888 55.000 0.00 0.00 45.14 1.85
299 300 0.112412 CCAGCCACCAGGGTTTAAGT 59.888 55.000 0.00 0.00 45.14 2.24
300 301 1.534729 CAGCCACCAGGGTTTAAGTC 58.465 55.000 0.00 0.00 45.14 3.01
301 302 1.145571 AGCCACCAGGGTTTAAGTCA 58.854 50.000 0.00 0.00 45.14 3.41
302 303 1.710809 AGCCACCAGGGTTTAAGTCAT 59.289 47.619 0.00 0.00 45.14 3.06
303 304 2.916934 AGCCACCAGGGTTTAAGTCATA 59.083 45.455 0.00 0.00 45.14 2.15
304 305 3.054361 AGCCACCAGGGTTTAAGTCATAG 60.054 47.826 0.00 0.00 45.14 2.23
305 306 3.054655 GCCACCAGGGTTTAAGTCATAGA 60.055 47.826 0.00 0.00 39.65 1.98
306 307 4.514401 CCACCAGGGTTTAAGTCATAGAC 58.486 47.826 0.00 0.00 0.00 2.59
307 308 4.225267 CCACCAGGGTTTAAGTCATAGACT 59.775 45.833 0.00 0.00 45.64 3.24
308 309 8.711167 GCCACCAGGGTTTAAGTCATAGACTT 62.711 46.154 15.74 15.74 45.92 3.01
319 320 4.256920 AGTCATAGACTTGACATTGGTGC 58.743 43.478 15.54 0.00 46.81 5.01
320 321 4.019860 AGTCATAGACTTGACATTGGTGCT 60.020 41.667 15.54 0.00 46.81 4.40
321 322 4.331168 GTCATAGACTTGACATTGGTGCTC 59.669 45.833 10.87 0.00 44.38 4.26
322 323 1.800805 AGACTTGACATTGGTGCTCG 58.199 50.000 0.00 0.00 0.00 5.03
323 324 1.070758 AGACTTGACATTGGTGCTCGT 59.929 47.619 0.00 0.00 0.00 4.18
324 325 2.299013 AGACTTGACATTGGTGCTCGTA 59.701 45.455 0.00 0.00 0.00 3.43
325 326 3.055819 AGACTTGACATTGGTGCTCGTAT 60.056 43.478 0.00 0.00 0.00 3.06
326 327 3.674997 ACTTGACATTGGTGCTCGTATT 58.325 40.909 0.00 0.00 0.00 1.89
327 328 4.827692 ACTTGACATTGGTGCTCGTATTA 58.172 39.130 0.00 0.00 0.00 0.98
328 329 5.428253 ACTTGACATTGGTGCTCGTATTAT 58.572 37.500 0.00 0.00 0.00 1.28
329 330 5.880332 ACTTGACATTGGTGCTCGTATTATT 59.120 36.000 0.00 0.00 0.00 1.40
330 331 5.984233 TGACATTGGTGCTCGTATTATTC 57.016 39.130 0.00 0.00 0.00 1.75
331 332 4.814234 TGACATTGGTGCTCGTATTATTCC 59.186 41.667 0.00 0.00 0.00 3.01
332 333 5.036117 ACATTGGTGCTCGTATTATTCCT 57.964 39.130 0.00 0.00 0.00 3.36
333 334 4.816385 ACATTGGTGCTCGTATTATTCCTG 59.184 41.667 0.00 0.00 0.00 3.86
334 335 4.746535 TTGGTGCTCGTATTATTCCTGA 57.253 40.909 0.00 0.00 0.00 3.86
335 336 4.746535 TGGTGCTCGTATTATTCCTGAA 57.253 40.909 0.00 0.00 0.00 3.02
336 337 5.290493 TGGTGCTCGTATTATTCCTGAAT 57.710 39.130 0.00 0.00 34.93 2.57
337 338 5.680619 TGGTGCTCGTATTATTCCTGAATT 58.319 37.500 0.00 0.00 32.50 2.17
338 339 6.119536 TGGTGCTCGTATTATTCCTGAATTT 58.880 36.000 0.00 0.00 32.50 1.82
339 340 7.276658 TGGTGCTCGTATTATTCCTGAATTTA 58.723 34.615 0.00 0.00 32.50 1.40
340 341 7.936847 TGGTGCTCGTATTATTCCTGAATTTAT 59.063 33.333 0.00 0.00 32.50 1.40
341 342 8.784043 GGTGCTCGTATTATTCCTGAATTTATT 58.216 33.333 0.00 0.00 32.50 1.40
354 355 5.514274 TGAATTTATTTCAGGATTCCGGC 57.486 39.130 0.00 0.00 39.44 6.13
355 356 4.952957 TGAATTTATTTCAGGATTCCGGCA 59.047 37.500 0.00 0.00 39.44 5.69
356 357 5.420421 TGAATTTATTTCAGGATTCCGGCAA 59.580 36.000 0.00 0.00 39.44 4.52
357 358 6.098124 TGAATTTATTTCAGGATTCCGGCAAT 59.902 34.615 0.00 6.07 39.44 3.56
358 359 4.916983 TTATTTCAGGATTCCGGCAATG 57.083 40.909 10.12 0.00 0.00 2.82
359 360 2.214376 TTTCAGGATTCCGGCAATGT 57.786 45.000 0.00 0.00 0.00 2.71
360 361 2.214376 TTCAGGATTCCGGCAATGTT 57.786 45.000 0.00 0.00 0.00 2.71
361 362 1.750193 TCAGGATTCCGGCAATGTTC 58.250 50.000 0.00 0.00 0.00 3.18
362 363 0.378257 CAGGATTCCGGCAATGTTCG 59.622 55.000 0.00 0.00 0.00 3.95
363 364 1.064134 GGATTCCGGCAATGTTCGC 59.936 57.895 0.00 0.00 0.00 4.70
364 365 1.376609 GGATTCCGGCAATGTTCGCT 61.377 55.000 0.00 0.00 0.00 4.93
365 366 0.028110 GATTCCGGCAATGTTCGCTC 59.972 55.000 0.00 0.00 0.00 5.03
366 367 0.676466 ATTCCGGCAATGTTCGCTCA 60.676 50.000 0.00 0.00 0.00 4.26
367 368 1.298157 TTCCGGCAATGTTCGCTCAG 61.298 55.000 0.00 0.00 0.00 3.35
368 369 2.034879 CCGGCAATGTTCGCTCAGT 61.035 57.895 0.00 0.00 0.00 3.41
369 370 1.133253 CGGCAATGTTCGCTCAGTG 59.867 57.895 3.53 3.53 36.64 3.66
370 371 1.568612 CGGCAATGTTCGCTCAGTGT 61.569 55.000 8.34 0.00 36.09 3.55
371 372 0.110056 GGCAATGTTCGCTCAGTGTG 60.110 55.000 8.34 0.00 36.09 3.82
372 373 0.867746 GCAATGTTCGCTCAGTGTGA 59.132 50.000 0.00 0.00 36.09 3.58
373 374 1.466167 GCAATGTTCGCTCAGTGTGAT 59.534 47.619 0.00 0.00 36.09 3.06
374 375 2.726989 GCAATGTTCGCTCAGTGTGATG 60.727 50.000 0.00 0.00 36.09 3.07
375 376 2.738314 CAATGTTCGCTCAGTGTGATGA 59.262 45.455 0.00 0.00 34.87 2.92
376 377 1.783284 TGTTCGCTCAGTGTGATGAC 58.217 50.000 0.00 0.00 34.87 3.06
377 378 1.068434 TGTTCGCTCAGTGTGATGACA 59.932 47.619 0.00 0.00 34.87 3.58
388 389 2.698803 TGTGATGACACTTTCCCATCG 58.301 47.619 0.00 0.00 46.07 3.84
389 390 2.301583 TGTGATGACACTTTCCCATCGA 59.698 45.455 0.00 0.00 46.07 3.59
390 391 2.932614 GTGATGACACTTTCCCATCGAG 59.067 50.000 0.00 0.00 42.99 4.04
391 392 2.567169 TGATGACACTTTCCCATCGAGT 59.433 45.455 0.00 0.00 39.48 4.18
392 393 2.455674 TGACACTTTCCCATCGAGTG 57.544 50.000 0.00 1.51 44.77 3.51
393 394 1.079503 GACACTTTCCCATCGAGTGC 58.920 55.000 2.88 0.00 43.44 4.40
394 395 0.396435 ACACTTTCCCATCGAGTGCA 59.604 50.000 2.88 0.00 43.44 4.57
395 396 1.202758 ACACTTTCCCATCGAGTGCAA 60.203 47.619 0.00 0.00 43.44 4.08
396 397 2.086869 CACTTTCCCATCGAGTGCAAT 58.913 47.619 0.00 0.00 34.97 3.56
397 398 2.086869 ACTTTCCCATCGAGTGCAATG 58.913 47.619 0.00 0.00 0.00 2.82
398 399 0.810648 TTTCCCATCGAGTGCAATGC 59.189 50.000 0.00 0.00 0.00 3.56
399 400 1.368345 TTCCCATCGAGTGCAATGCG 61.368 55.000 0.00 0.00 0.00 4.73
400 401 2.023741 CCATCGAGTGCAATGCGC 59.976 61.111 11.28 11.28 42.89 6.09
401 402 2.023741 CATCGAGTGCAATGCGCC 59.976 61.111 15.78 6.20 40.23 6.53
402 403 2.124983 ATCGAGTGCAATGCGCCT 60.125 55.556 15.78 6.02 40.23 5.52
403 404 2.466982 ATCGAGTGCAATGCGCCTG 61.467 57.895 15.78 8.31 40.23 4.85
404 405 3.425713 CGAGTGCAATGCGCCTGT 61.426 61.111 15.78 0.00 40.23 4.00
405 406 2.177531 GAGTGCAATGCGCCTGTG 59.822 61.111 15.78 0.53 40.23 3.66
406 407 3.332493 GAGTGCAATGCGCCTGTGG 62.332 63.158 15.78 0.00 40.23 4.17
407 408 3.673484 GTGCAATGCGCCTGTGGT 61.673 61.111 7.68 0.00 41.33 4.16
408 409 3.672447 TGCAATGCGCCTGTGGTG 61.672 61.111 4.18 0.00 41.33 4.17
409 410 3.364441 GCAATGCGCCTGTGGTGA 61.364 61.111 4.18 0.00 34.74 4.02
410 411 2.562912 CAATGCGCCTGTGGTGAC 59.437 61.111 4.18 0.00 34.74 3.67
411 412 1.968017 CAATGCGCCTGTGGTGACT 60.968 57.895 4.18 0.00 34.74 3.41
412 413 1.228245 AATGCGCCTGTGGTGACTT 60.228 52.632 4.18 0.00 34.74 3.01
413 414 1.237285 AATGCGCCTGTGGTGACTTC 61.237 55.000 4.18 0.00 34.74 3.01
414 415 3.414700 GCGCCTGTGGTGACTTCG 61.415 66.667 0.00 0.00 34.74 3.79
415 416 2.029073 CGCCTGTGGTGACTTCGT 59.971 61.111 0.00 0.00 34.74 3.85
416 417 2.310233 CGCCTGTGGTGACTTCGTG 61.310 63.158 0.00 0.00 34.74 4.35
417 418 1.069090 GCCTGTGGTGACTTCGTGA 59.931 57.895 0.00 0.00 0.00 4.35
418 419 0.531974 GCCTGTGGTGACTTCGTGAA 60.532 55.000 0.00 0.00 0.00 3.18
419 420 1.948104 CCTGTGGTGACTTCGTGAAA 58.052 50.000 0.00 0.00 0.00 2.69
420 421 2.494059 CCTGTGGTGACTTCGTGAAAT 58.506 47.619 0.00 0.00 0.00 2.17
421 422 2.480419 CCTGTGGTGACTTCGTGAAATC 59.520 50.000 0.00 0.00 0.00 2.17
422 423 3.393800 CTGTGGTGACTTCGTGAAATCT 58.606 45.455 0.00 0.00 0.00 2.40
423 424 3.390135 TGTGGTGACTTCGTGAAATCTC 58.610 45.455 0.00 0.00 0.00 2.75
424 425 3.181470 TGTGGTGACTTCGTGAAATCTCA 60.181 43.478 0.00 0.00 0.00 3.27
425 426 3.807622 GTGGTGACTTCGTGAAATCTCAA 59.192 43.478 0.00 0.00 31.88 3.02
426 427 4.058124 TGGTGACTTCGTGAAATCTCAAG 58.942 43.478 0.00 0.00 31.88 3.02
427 428 4.202212 TGGTGACTTCGTGAAATCTCAAGA 60.202 41.667 0.00 0.00 38.16 3.02
428 429 4.932200 GGTGACTTCGTGAAATCTCAAGAT 59.068 41.667 0.00 0.00 39.40 2.40
429 430 5.163913 GGTGACTTCGTGAAATCTCAAGATG 60.164 44.000 0.00 0.00 39.40 2.90
430 431 5.406780 GTGACTTCGTGAAATCTCAAGATGT 59.593 40.000 3.69 3.69 44.98 3.06
431 432 5.991606 TGACTTCGTGAAATCTCAAGATGTT 59.008 36.000 5.27 0.00 43.53 2.71
432 433 7.116376 GTGACTTCGTGAAATCTCAAGATGTTA 59.884 37.037 5.27 0.00 43.53 2.41
433 434 7.819415 TGACTTCGTGAAATCTCAAGATGTTAT 59.181 33.333 5.27 0.00 43.53 1.89
434 435 7.968246 ACTTCGTGAAATCTCAAGATGTTATG 58.032 34.615 0.00 0.00 42.03 1.90
435 436 7.604164 ACTTCGTGAAATCTCAAGATGTTATGT 59.396 33.333 0.00 0.00 42.03 2.29
444 445 1.112113 AGATGTTATGTCGGCTCCGT 58.888 50.000 8.28 0.00 40.74 4.69
453 454 1.451567 TCGGCTCCGTCTCTCGAAT 60.452 57.895 8.28 0.00 42.86 3.34
461 462 1.402852 CCGTCTCTCGAATGTGCTCAA 60.403 52.381 0.00 0.00 42.86 3.02
474 475 2.364324 TGTGCTCAAAGGAGTAAGACGT 59.636 45.455 0.00 0.00 43.37 4.34
515 516 3.179048 TGTATGTGAGCGACTTCGATTG 58.821 45.455 2.02 0.00 43.02 2.67
577 578 5.872617 CCCGTATATGTTTGTTGAAGTCAGA 59.127 40.000 0.00 0.00 0.00 3.27
590 591 7.559486 TGTTGAAGTCAGATATTGCTCTACAT 58.441 34.615 0.00 0.00 0.00 2.29
635 647 3.021788 CGCGTTTGGTTGCCAACG 61.022 61.111 0.00 14.04 43.82 4.10
646 658 0.382158 TTGCCAACGAAATCGCAACA 59.618 45.000 2.15 0.00 44.43 3.33
692 704 5.523438 TGTGTCTGATTGTGTACACAGTA 57.477 39.130 26.52 15.20 45.27 2.74
701 713 0.895530 TGTACACAGTAGGCTGGCTC 59.104 55.000 7.13 0.00 46.62 4.70
702 714 0.895530 GTACACAGTAGGCTGGCTCA 59.104 55.000 7.13 0.00 46.62 4.26
726 738 2.739913 TGCGCACGAAGCTTAAAGTAAT 59.260 40.909 5.66 0.00 42.61 1.89
732 744 5.220491 GCACGAAGCTTAAAGTAATCCTCAG 60.220 44.000 0.00 0.00 41.15 3.35
733 745 5.869888 CACGAAGCTTAAAGTAATCCTCAGT 59.130 40.000 0.00 0.00 0.00 3.41
740 752 4.917906 AAAGTAATCCTCAGTCTGGCTT 57.082 40.909 0.00 0.00 0.00 4.35
749 761 3.330267 CTCAGTCTGGCTTGGTAGAAAC 58.670 50.000 0.00 0.00 0.00 2.78
753 765 1.699634 TCTGGCTTGGTAGAAACTGCT 59.300 47.619 0.00 0.00 0.00 4.24
782 794 2.617308 CGATAGTTTCTACCGAGCCAGA 59.383 50.000 0.00 0.00 0.00 3.86
786 798 1.272769 GTTTCTACCGAGCCAGACTGT 59.727 52.381 0.93 0.00 0.00 3.55
796 808 4.624364 CAGACTGTGGGCGGCACA 62.624 66.667 12.47 0.00 0.00 4.57
797 809 3.872603 AGACTGTGGGCGGCACAA 61.873 61.111 6.45 0.00 31.61 3.33
798 810 3.357079 GACTGTGGGCGGCACAAG 61.357 66.667 6.45 9.62 31.61 3.16
890 1123 0.179045 CCAAATCTAGGCTCACCCCG 60.179 60.000 0.00 0.00 36.11 5.73
977 1211 1.818060 CGATTTCCCCATTGCTCAACA 59.182 47.619 0.00 0.00 0.00 3.33
1323 1565 5.359576 GTGGCCATGTTCCTTCATATTGTTA 59.640 40.000 9.72 0.00 0.00 2.41
1426 1668 2.505819 GTGTCCTATGATGTTGGGGAGT 59.494 50.000 0.00 0.00 0.00 3.85
1443 1685 3.497048 GGGAGTCCAGACGAGAGATGATA 60.497 52.174 12.30 0.00 36.20 2.15
1472 1714 2.834549 CAACTGACCAGACTCCTACCAT 59.165 50.000 3.76 0.00 0.00 3.55
1478 1720 3.706594 GACCAGACTCCTACCATGATTCA 59.293 47.826 0.00 0.00 0.00 2.57
1663 1912 0.316204 GCCAAAGTCACAAGCTGCAT 59.684 50.000 1.02 0.00 0.00 3.96
1794 2045 6.279123 ATGCTAACATACTCACTGACATCAG 58.721 40.000 7.36 7.36 41.44 2.90
1795 2046 6.127225 ATGCTAACATACTCACTGACATCAGT 60.127 38.462 8.77 8.77 45.89 3.41
1796 2047 7.896645 ATGCTAACATACTCACTGACATCAGTC 60.897 40.741 11.64 0.00 44.40 3.51
1815 2066 4.643795 CCCAGACGGCATCAACAT 57.356 55.556 0.00 0.00 0.00 2.71
1835 2104 4.780021 ACATCCCTGATGACAAGTTCTACT 59.220 41.667 10.84 0.00 42.09 2.57
1985 2258 3.395639 CAACCTTAGAGTAACGGTTGCA 58.604 45.455 11.50 0.00 46.63 4.08
2063 2337 3.569453 CCCTTACCCTACCCAGGTTAAGA 60.569 52.174 8.98 0.00 45.41 2.10
2079 2353 7.552687 CCAGGTTAAGATTGTTCTAGCATGTTA 59.447 37.037 0.00 0.00 0.00 2.41
2087 2361 6.741992 TTGTTCTAGCATGTTACATTCTGG 57.258 37.500 7.71 4.99 0.00 3.86
2120 2394 2.498481 CTGCAATGGGGTGTTGATGAAT 59.502 45.455 0.00 0.00 0.00 2.57
2141 2415 1.270907 GGTGCCTGAAGAGGAAGAGA 58.729 55.000 0.00 0.00 42.93 3.10
2169 2443 0.802607 GACGATCTTGACCTCGGTGC 60.803 60.000 0.00 0.00 39.16 5.01
2274 2560 7.181845 AGGTTAGACAAGGATCTGAAGAAGAAT 59.818 37.037 0.00 0.00 38.79 2.40
2283 2583 6.383726 AGGATCTGAAGAAGAATAGCAAGAGT 59.616 38.462 0.00 0.00 38.79 3.24
2306 2686 0.546267 AGCAGAGGAGGAGGAAGCAA 60.546 55.000 0.00 0.00 0.00 3.91
2333 2723 0.699231 AGGGGAGGGATGATGAACCC 60.699 60.000 0.00 0.00 45.88 4.11
2334 2724 1.846973 GGGAGGGATGATGAACCCC 59.153 63.158 0.00 0.00 46.64 4.95
2518 2929 2.168936 ACCAAACAACGAGTCCTGTGTA 59.831 45.455 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.306364 CGAGTGTTGAGGGAGAGTTTCAT 60.306 47.826 0.00 0.00 0.00 2.57
2 3 2.610727 CCGAGTGTTGAGGGAGAGTTTC 60.611 54.545 0.00 0.00 0.00 2.78
4 5 0.969894 CCGAGTGTTGAGGGAGAGTT 59.030 55.000 0.00 0.00 0.00 3.01
5 6 1.536943 GCCGAGTGTTGAGGGAGAGT 61.537 60.000 0.00 0.00 0.00 3.24
6 7 1.216710 GCCGAGTGTTGAGGGAGAG 59.783 63.158 0.00 0.00 0.00 3.20
7 8 1.533033 TGCCGAGTGTTGAGGGAGA 60.533 57.895 0.00 0.00 0.00 3.71
8 9 1.079543 CTGCCGAGTGTTGAGGGAG 60.080 63.158 0.00 0.00 37.16 4.30
9 10 2.583441 CCTGCCGAGTGTTGAGGGA 61.583 63.158 0.00 0.00 0.00 4.20
10 11 1.903877 ATCCTGCCGAGTGTTGAGGG 61.904 60.000 0.00 0.00 0.00 4.30
11 12 0.460987 GATCCTGCCGAGTGTTGAGG 60.461 60.000 0.00 0.00 0.00 3.86
12 13 0.803768 CGATCCTGCCGAGTGTTGAG 60.804 60.000 0.00 0.00 0.00 3.02
13 14 1.215382 CGATCCTGCCGAGTGTTGA 59.785 57.895 0.00 0.00 0.00 3.18
14 15 1.811266 CCGATCCTGCCGAGTGTTG 60.811 63.158 0.00 0.00 0.00 3.33
15 16 1.949847 CTCCGATCCTGCCGAGTGTT 61.950 60.000 0.00 0.00 0.00 3.32
16 17 2.362503 TCCGATCCTGCCGAGTGT 60.363 61.111 0.00 0.00 0.00 3.55
17 18 1.949847 AACTCCGATCCTGCCGAGTG 61.950 60.000 0.00 0.00 0.00 3.51
18 19 1.668101 GAACTCCGATCCTGCCGAGT 61.668 60.000 0.00 0.00 0.00 4.18
19 20 1.066587 GAACTCCGATCCTGCCGAG 59.933 63.158 0.00 0.00 0.00 4.63
20 21 2.771639 CGAACTCCGATCCTGCCGA 61.772 63.158 0.00 0.00 41.76 5.54
21 22 2.278857 CGAACTCCGATCCTGCCG 60.279 66.667 0.00 0.00 41.76 5.69
22 23 3.207354 TCGAACTCCGATCCTGCC 58.793 61.111 0.00 0.00 43.23 4.85
29 30 0.323087 TGATGTCCCTCGAACTCCGA 60.323 55.000 0.00 0.00 46.35 4.55
30 31 0.747255 ATGATGTCCCTCGAACTCCG 59.253 55.000 0.00 0.00 40.25 4.63
31 32 1.269309 CGATGATGTCCCTCGAACTCC 60.269 57.143 0.00 0.00 34.41 3.85
32 33 1.269309 CCGATGATGTCCCTCGAACTC 60.269 57.143 0.00 0.00 34.41 3.01
33 34 0.747255 CCGATGATGTCCCTCGAACT 59.253 55.000 0.00 0.00 34.41 3.01
34 35 0.249489 CCCGATGATGTCCCTCGAAC 60.249 60.000 0.00 0.00 34.41 3.95
35 36 2.028125 GCCCGATGATGTCCCTCGAA 62.028 60.000 0.00 0.00 34.41 3.71
36 37 2.498941 GCCCGATGATGTCCCTCGA 61.499 63.158 0.00 0.00 34.41 4.04
37 38 2.029666 GCCCGATGATGTCCCTCG 59.970 66.667 0.00 0.00 0.00 4.63
38 39 1.070445 CAGCCCGATGATGTCCCTC 59.930 63.158 0.00 0.00 0.00 4.30
39 40 0.982852 TTCAGCCCGATGATGTCCCT 60.983 55.000 0.00 0.00 0.00 4.20
40 41 0.815615 GTTCAGCCCGATGATGTCCC 60.816 60.000 0.00 0.00 0.00 4.46
41 42 1.154205 CGTTCAGCCCGATGATGTCC 61.154 60.000 0.00 0.00 0.00 4.02
42 43 0.460284 ACGTTCAGCCCGATGATGTC 60.460 55.000 0.00 0.00 0.00 3.06
43 44 0.740868 CACGTTCAGCCCGATGATGT 60.741 55.000 0.00 0.00 0.00 3.06
44 45 0.740868 ACACGTTCAGCCCGATGATG 60.741 55.000 0.00 0.00 0.00 3.07
45 46 0.740868 CACACGTTCAGCCCGATGAT 60.741 55.000 0.00 0.00 0.00 2.45
46 47 1.374125 CACACGTTCAGCCCGATGA 60.374 57.895 0.00 0.00 0.00 2.92
47 48 3.027170 GCACACGTTCAGCCCGATG 62.027 63.158 0.00 0.00 0.00 3.84
48 49 2.742372 GCACACGTTCAGCCCGAT 60.742 61.111 0.00 0.00 0.00 4.18
49 50 3.923864 AGCACACGTTCAGCCCGA 61.924 61.111 0.00 0.00 0.00 5.14
50 51 3.716006 CAGCACACGTTCAGCCCG 61.716 66.667 0.00 0.00 0.00 6.13
51 52 1.891919 TTCAGCACACGTTCAGCCC 60.892 57.895 0.00 0.00 0.00 5.19
52 53 1.160329 AGTTCAGCACACGTTCAGCC 61.160 55.000 0.00 0.00 0.00 4.85
53 54 0.233332 GAGTTCAGCACACGTTCAGC 59.767 55.000 0.00 0.00 0.00 4.26
54 55 0.504384 CGAGTTCAGCACACGTTCAG 59.496 55.000 0.00 0.00 35.01 3.02
55 56 0.874175 CCGAGTTCAGCACACGTTCA 60.874 55.000 0.00 0.00 37.75 3.18
56 57 0.596600 TCCGAGTTCAGCACACGTTC 60.597 55.000 0.00 0.00 37.75 3.95
57 58 0.597637 CTCCGAGTTCAGCACACGTT 60.598 55.000 0.00 0.00 37.75 3.99
58 59 1.007271 CTCCGAGTTCAGCACACGT 60.007 57.895 0.00 0.00 37.75 4.49
59 60 1.734477 CCTCCGAGTTCAGCACACG 60.734 63.158 0.00 0.00 39.03 4.49
60 61 0.946221 CACCTCCGAGTTCAGCACAC 60.946 60.000 0.00 0.00 0.00 3.82
61 62 1.367471 CACCTCCGAGTTCAGCACA 59.633 57.895 0.00 0.00 0.00 4.57
62 63 2.029844 GCACCTCCGAGTTCAGCAC 61.030 63.158 0.00 0.00 0.00 4.40
63 64 2.343758 GCACCTCCGAGTTCAGCA 59.656 61.111 0.00 0.00 0.00 4.41
64 65 2.435059 GGCACCTCCGAGTTCAGC 60.435 66.667 0.00 0.00 0.00 4.26
73 74 2.505557 CGAACGTACGGCACCTCC 60.506 66.667 21.06 0.00 0.00 4.30
74 75 2.505557 CCGAACGTACGGCACCTC 60.506 66.667 21.06 6.84 46.20 3.85
82 83 2.159517 ACCGATCAAGTACCGAACGTAC 60.160 50.000 10.35 0.00 46.69 3.67
83 84 2.083774 ACCGATCAAGTACCGAACGTA 58.916 47.619 10.35 0.00 0.00 3.57
84 85 0.883833 ACCGATCAAGTACCGAACGT 59.116 50.000 10.35 0.00 0.00 3.99
85 86 1.542544 GACCGATCAAGTACCGAACG 58.457 55.000 5.81 5.81 0.00 3.95
86 87 1.542544 CGACCGATCAAGTACCGAAC 58.457 55.000 0.00 0.00 0.00 3.95
87 88 0.452987 CCGACCGATCAAGTACCGAA 59.547 55.000 0.00 0.00 0.00 4.30
88 89 0.392863 TCCGACCGATCAAGTACCGA 60.393 55.000 0.00 0.00 0.00 4.69
89 90 0.666913 ATCCGACCGATCAAGTACCG 59.333 55.000 0.00 0.00 0.00 4.02
90 91 1.334779 CGATCCGACCGATCAAGTACC 60.335 57.143 4.93 0.00 46.85 3.34
91 92 1.332997 ACGATCCGACCGATCAAGTAC 59.667 52.381 0.00 0.00 46.85 2.73
92 93 1.332686 CACGATCCGACCGATCAAGTA 59.667 52.381 0.00 0.00 46.85 2.24
93 94 0.100682 CACGATCCGACCGATCAAGT 59.899 55.000 0.00 0.00 46.85 3.16
94 95 0.380733 TCACGATCCGACCGATCAAG 59.619 55.000 0.00 0.00 46.85 3.02
95 96 0.812549 TTCACGATCCGACCGATCAA 59.187 50.000 0.00 0.00 46.85 2.57
96 97 0.380733 CTTCACGATCCGACCGATCA 59.619 55.000 0.00 0.00 46.85 2.92
97 98 0.661552 TCTTCACGATCCGACCGATC 59.338 55.000 0.00 0.00 43.58 3.69
98 99 0.381089 GTCTTCACGATCCGACCGAT 59.619 55.000 0.00 0.00 0.00 4.18
99 100 1.798735 GTCTTCACGATCCGACCGA 59.201 57.895 0.00 0.00 0.00 4.69
100 101 4.379221 GTCTTCACGATCCGACCG 57.621 61.111 0.00 0.00 0.00 4.79
105 106 7.051981 GATGTAGTCATACGTCTTCACGATCC 61.052 46.154 0.74 0.00 42.40 3.36
106 107 5.846994 GATGTAGTCATACGTCTTCACGATC 59.153 44.000 0.74 0.00 42.40 3.69
107 108 5.296035 TGATGTAGTCATACGTCTTCACGAT 59.704 40.000 0.74 0.00 44.85 3.73
108 109 4.632688 TGATGTAGTCATACGTCTTCACGA 59.367 41.667 0.74 0.00 44.85 4.35
109 110 4.905269 TGATGTAGTCATACGTCTTCACG 58.095 43.478 0.00 0.00 44.85 4.35
110 111 5.515626 GGTTGATGTAGTCATACGTCTTCAC 59.484 44.000 0.00 4.05 44.85 3.18
111 112 5.647589 GGTTGATGTAGTCATACGTCTTCA 58.352 41.667 0.00 0.00 44.85 3.02
112 113 4.733887 CGGTTGATGTAGTCATACGTCTTC 59.266 45.833 0.00 3.12 44.85 2.87
113 114 4.669318 CGGTTGATGTAGTCATACGTCTT 58.331 43.478 0.00 0.00 44.85 3.01
114 115 3.488721 GCGGTTGATGTAGTCATACGTCT 60.489 47.826 0.00 0.00 44.85 4.18
115 116 2.787680 GCGGTTGATGTAGTCATACGTC 59.212 50.000 0.00 1.51 44.83 4.34
116 117 2.793585 CGCGGTTGATGTAGTCATACGT 60.794 50.000 0.00 0.00 38.10 3.57
117 118 1.779157 CGCGGTTGATGTAGTCATACG 59.221 52.381 0.00 0.00 38.54 3.06
118 119 2.805845 ACGCGGTTGATGTAGTCATAC 58.194 47.619 12.47 0.00 36.54 2.39
119 120 3.183754 CAACGCGGTTGATGTAGTCATA 58.816 45.455 12.47 0.00 45.28 2.15
120 121 1.999735 CAACGCGGTTGATGTAGTCAT 59.000 47.619 12.47 0.00 45.28 3.06
121 122 1.269883 ACAACGCGGTTGATGTAGTCA 60.270 47.619 22.26 0.00 45.28 3.41
122 123 1.126113 CACAACGCGGTTGATGTAGTC 59.874 52.381 22.26 0.00 45.28 2.59
123 124 1.144969 CACAACGCGGTTGATGTAGT 58.855 50.000 22.26 2.04 45.28 2.73
124 125 0.179225 GCACAACGCGGTTGATGTAG 60.179 55.000 22.26 1.41 45.28 2.74
125 126 0.601576 AGCACAACGCGGTTGATGTA 60.602 50.000 22.26 0.00 45.28 2.29
126 127 0.601576 TAGCACAACGCGGTTGATGT 60.602 50.000 22.26 11.72 45.28 3.06
127 128 0.515127 TTAGCACAACGCGGTTGATG 59.485 50.000 22.26 17.39 45.28 3.07
128 129 0.515564 GTTAGCACAACGCGGTTGAT 59.484 50.000 22.26 13.46 45.28 2.57
129 130 1.823260 CGTTAGCACAACGCGGTTGA 61.823 55.000 22.26 3.38 45.28 3.18
148 149 2.095718 CTTGTAGACCAAAAGCGGAAGC 60.096 50.000 0.00 0.00 45.58 3.86
149 150 2.484264 CCTTGTAGACCAAAAGCGGAAG 59.516 50.000 0.00 0.00 31.20 3.46
150 151 2.500229 CCTTGTAGACCAAAAGCGGAA 58.500 47.619 0.00 0.00 31.20 4.30
151 152 1.271163 CCCTTGTAGACCAAAAGCGGA 60.271 52.381 0.00 0.00 31.20 5.54
152 153 1.165270 CCCTTGTAGACCAAAAGCGG 58.835 55.000 0.00 0.00 31.20 5.52
153 154 1.892209 ACCCTTGTAGACCAAAAGCG 58.108 50.000 0.00 0.00 31.20 4.68
154 155 2.740447 CGTACCCTTGTAGACCAAAAGC 59.260 50.000 0.00 0.00 31.20 3.51
155 156 3.999046 ACGTACCCTTGTAGACCAAAAG 58.001 45.455 0.00 0.00 31.20 2.27
156 157 4.832266 TCTACGTACCCTTGTAGACCAAAA 59.168 41.667 4.74 0.00 41.47 2.44
157 158 4.406456 TCTACGTACCCTTGTAGACCAAA 58.594 43.478 4.74 0.00 41.47 3.28
158 159 4.032960 TCTACGTACCCTTGTAGACCAA 57.967 45.455 4.74 0.00 41.47 3.67
159 160 3.719268 TCTACGTACCCTTGTAGACCA 57.281 47.619 4.74 0.00 41.47 4.02
162 163 4.216257 GTGTTGTCTACGTACCCTTGTAGA 59.784 45.833 4.74 4.74 43.47 2.59
163 164 4.217118 AGTGTTGTCTACGTACCCTTGTAG 59.783 45.833 0.00 0.62 39.50 2.74
164 165 4.144297 AGTGTTGTCTACGTACCCTTGTA 58.856 43.478 0.00 0.00 0.00 2.41
165 166 2.961062 AGTGTTGTCTACGTACCCTTGT 59.039 45.455 0.00 0.00 0.00 3.16
166 167 3.255149 AGAGTGTTGTCTACGTACCCTTG 59.745 47.826 0.00 0.00 0.00 3.61
167 168 3.494332 AGAGTGTTGTCTACGTACCCTT 58.506 45.455 0.00 0.00 0.00 3.95
168 169 3.080319 GAGAGTGTTGTCTACGTACCCT 58.920 50.000 0.00 0.00 0.00 4.34
169 170 2.163211 GGAGAGTGTTGTCTACGTACCC 59.837 54.545 0.00 0.00 0.00 3.69
170 171 2.163211 GGGAGAGTGTTGTCTACGTACC 59.837 54.545 0.00 0.00 0.00 3.34
171 172 2.163211 GGGGAGAGTGTTGTCTACGTAC 59.837 54.545 0.00 0.00 0.00 3.67
172 173 2.040813 AGGGGAGAGTGTTGTCTACGTA 59.959 50.000 0.00 0.00 0.00 3.57
173 174 1.203025 AGGGGAGAGTGTTGTCTACGT 60.203 52.381 0.00 0.00 0.00 3.57
174 175 1.473278 GAGGGGAGAGTGTTGTCTACG 59.527 57.143 0.00 0.00 0.00 3.51
175 176 2.756207 GAGAGGGGAGAGTGTTGTCTAC 59.244 54.545 0.00 0.00 0.00 2.59
176 177 2.618302 CGAGAGGGGAGAGTGTTGTCTA 60.618 54.545 0.00 0.00 0.00 2.59
177 178 1.888826 CGAGAGGGGAGAGTGTTGTCT 60.889 57.143 0.00 0.00 0.00 3.41
178 179 0.528470 CGAGAGGGGAGAGTGTTGTC 59.472 60.000 0.00 0.00 0.00 3.18
179 180 0.178958 ACGAGAGGGGAGAGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
180 181 0.969894 AACGAGAGGGGAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
181 182 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
182 183 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
183 184 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
184 185 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
185 186 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
186 187 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
187 188 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
188 189 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
189 190 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
190 191 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
191 192 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
192 193 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
193 194 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
194 195 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
195 196 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
196 197 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
197 198 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
198 199 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
199 200 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
200 201 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
201 202 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
202 203 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
203 204 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
204 205 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
205 206 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
206 207 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
207 208 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
208 209 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
209 210 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
210 211 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
211 212 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
212 213 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
213 214 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
214 215 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
215 216 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
216 217 0.175760 ATCCTACGCACACGCAAGAT 59.824 50.000 0.00 0.00 45.53 2.40
217 218 0.037697 AATCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
218 219 0.796312 AAATCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
219 220 1.231221 AAAATCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
220 221 1.231221 AAAAATCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
239 240 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
240 241 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
241 242 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
242 243 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
243 244 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
244 245 4.393990 CCTGTTGGGGAACGTAGTAATTTC 59.606 45.833 0.00 0.00 45.00 2.17
245 246 4.041938 TCCTGTTGGGGAACGTAGTAATTT 59.958 41.667 0.00 0.00 35.74 1.82
246 247 3.583966 TCCTGTTGGGGAACGTAGTAATT 59.416 43.478 0.00 0.00 35.74 1.40
247 248 3.055602 GTCCTGTTGGGGAACGTAGTAAT 60.056 47.826 0.00 0.00 37.10 1.89
248 249 2.299867 GTCCTGTTGGGGAACGTAGTAA 59.700 50.000 0.00 0.00 37.10 2.24
249 250 1.895131 GTCCTGTTGGGGAACGTAGTA 59.105 52.381 0.00 0.00 37.10 1.82
250 251 0.683412 GTCCTGTTGGGGAACGTAGT 59.317 55.000 0.00 0.00 37.10 2.73
251 252 0.682852 TGTCCTGTTGGGGAACGTAG 59.317 55.000 0.00 0.00 37.10 3.51
252 253 0.682852 CTGTCCTGTTGGGGAACGTA 59.317 55.000 0.00 0.00 37.10 3.57
253 254 1.342672 ACTGTCCTGTTGGGGAACGT 61.343 55.000 0.00 0.00 37.10 3.99
254 255 0.884704 CACTGTCCTGTTGGGGAACG 60.885 60.000 0.00 0.00 37.10 3.95
255 256 0.537371 CCACTGTCCTGTTGGGGAAC 60.537 60.000 0.00 0.00 37.10 3.62
256 257 0.991355 ACCACTGTCCTGTTGGGGAA 60.991 55.000 0.00 0.00 37.10 3.97
257 258 0.104882 TACCACTGTCCTGTTGGGGA 60.105 55.000 0.00 0.00 35.33 4.81
258 259 0.991920 ATACCACTGTCCTGTTGGGG 59.008 55.000 0.00 0.00 35.33 4.96
259 260 1.628340 TGATACCACTGTCCTGTTGGG 59.372 52.381 0.00 0.00 0.00 4.12
260 261 2.615493 GGTGATACCACTGTCCTGTTGG 60.615 54.545 0.00 0.00 42.77 3.77
261 262 2.038426 TGGTGATACCACTGTCCTGTTG 59.962 50.000 0.00 0.00 44.79 3.33
262 263 2.303022 CTGGTGATACCACTGTCCTGTT 59.697 50.000 0.00 0.00 44.79 3.16
263 264 1.902508 CTGGTGATACCACTGTCCTGT 59.097 52.381 0.00 0.00 44.79 4.00
264 265 1.406069 GCTGGTGATACCACTGTCCTG 60.406 57.143 0.00 0.00 44.79 3.86
265 266 0.905357 GCTGGTGATACCACTGTCCT 59.095 55.000 0.00 0.00 44.79 3.85
266 267 0.107654 GGCTGGTGATACCACTGTCC 60.108 60.000 0.00 0.00 44.79 4.02
267 268 0.613260 TGGCTGGTGATACCACTGTC 59.387 55.000 0.00 0.00 44.79 3.51
268 269 0.324943 GTGGCTGGTGATACCACTGT 59.675 55.000 4.18 0.00 44.79 3.55
269 270 3.159298 GTGGCTGGTGATACCACTG 57.841 57.895 4.18 0.00 44.79 3.66
273 274 1.224592 CCTGGTGGCTGGTGATACC 59.775 63.158 0.00 0.00 39.22 2.73
274 275 1.224592 CCCTGGTGGCTGGTGATAC 59.775 63.158 0.00 0.00 0.00 2.24
275 276 0.844661 AACCCTGGTGGCTGGTGATA 60.845 55.000 0.00 0.00 37.83 2.15
276 277 1.729267 AAACCCTGGTGGCTGGTGAT 61.729 55.000 0.00 0.00 37.83 3.06
277 278 1.063070 TAAACCCTGGTGGCTGGTGA 61.063 55.000 0.00 0.00 37.83 4.02
278 279 0.178975 TTAAACCCTGGTGGCTGGTG 60.179 55.000 0.00 0.00 37.83 4.17
279 280 0.112412 CTTAAACCCTGGTGGCTGGT 59.888 55.000 0.00 0.00 37.83 4.00
280 281 0.112412 ACTTAAACCCTGGTGGCTGG 59.888 55.000 0.00 0.00 37.83 4.85
281 282 1.202879 TGACTTAAACCCTGGTGGCTG 60.203 52.381 0.00 0.00 37.83 4.85
282 283 1.145571 TGACTTAAACCCTGGTGGCT 58.854 50.000 0.00 0.00 37.83 4.75
283 284 2.215942 ATGACTTAAACCCTGGTGGC 57.784 50.000 0.00 0.00 37.83 5.01
284 285 4.225267 AGTCTATGACTTAAACCCTGGTGG 59.775 45.833 0.00 0.00 40.28 4.61
285 286 5.422214 AGTCTATGACTTAAACCCTGGTG 57.578 43.478 0.00 0.00 40.28 4.17
299 300 4.507710 GAGCACCAATGTCAAGTCTATGA 58.492 43.478 0.00 0.00 0.00 2.15
300 301 3.308053 CGAGCACCAATGTCAAGTCTATG 59.692 47.826 0.00 0.00 0.00 2.23
301 302 3.055819 ACGAGCACCAATGTCAAGTCTAT 60.056 43.478 0.00 0.00 0.00 1.98
302 303 2.299013 ACGAGCACCAATGTCAAGTCTA 59.701 45.455 0.00 0.00 0.00 2.59
303 304 1.070758 ACGAGCACCAATGTCAAGTCT 59.929 47.619 0.00 0.00 0.00 3.24
304 305 1.512926 ACGAGCACCAATGTCAAGTC 58.487 50.000 0.00 0.00 0.00 3.01
305 306 2.831685 TACGAGCACCAATGTCAAGT 57.168 45.000 0.00 0.00 0.00 3.16
306 307 5.991328 ATAATACGAGCACCAATGTCAAG 57.009 39.130 0.00 0.00 0.00 3.02
307 308 5.295787 GGAATAATACGAGCACCAATGTCAA 59.704 40.000 0.00 0.00 0.00 3.18
308 309 4.814234 GGAATAATACGAGCACCAATGTCA 59.186 41.667 0.00 0.00 0.00 3.58
309 310 5.050091 CAGGAATAATACGAGCACCAATGTC 60.050 44.000 0.00 0.00 0.00 3.06
310 311 4.816385 CAGGAATAATACGAGCACCAATGT 59.184 41.667 0.00 0.00 0.00 2.71
311 312 5.056480 TCAGGAATAATACGAGCACCAATG 58.944 41.667 0.00 0.00 0.00 2.82
312 313 5.290493 TCAGGAATAATACGAGCACCAAT 57.710 39.130 0.00 0.00 0.00 3.16
313 314 4.746535 TCAGGAATAATACGAGCACCAA 57.253 40.909 0.00 0.00 0.00 3.67
314 315 4.746535 TTCAGGAATAATACGAGCACCA 57.253 40.909 0.00 0.00 0.00 4.17
315 316 6.619801 AAATTCAGGAATAATACGAGCACC 57.380 37.500 0.00 0.00 0.00 5.01
332 333 4.952957 TGCCGGAATCCTGAAATAAATTCA 59.047 37.500 5.05 0.00 45.71 2.57
333 334 5.514274 TGCCGGAATCCTGAAATAAATTC 57.486 39.130 5.05 0.00 38.60 2.17
334 335 5.930837 TTGCCGGAATCCTGAAATAAATT 57.069 34.783 5.05 0.00 0.00 1.82
335 336 5.363580 ACATTGCCGGAATCCTGAAATAAAT 59.636 36.000 5.05 0.00 0.00 1.40
336 337 4.709397 ACATTGCCGGAATCCTGAAATAAA 59.291 37.500 5.05 0.00 0.00 1.40
337 338 4.277476 ACATTGCCGGAATCCTGAAATAA 58.723 39.130 5.05 0.00 0.00 1.40
338 339 3.897239 ACATTGCCGGAATCCTGAAATA 58.103 40.909 5.05 0.00 0.00 1.40
339 340 2.738743 ACATTGCCGGAATCCTGAAAT 58.261 42.857 5.05 0.00 0.00 2.17
340 341 2.214376 ACATTGCCGGAATCCTGAAA 57.786 45.000 5.05 0.00 0.00 2.69
341 342 2.091541 GAACATTGCCGGAATCCTGAA 58.908 47.619 5.05 0.00 0.00 3.02
342 343 1.750193 GAACATTGCCGGAATCCTGA 58.250 50.000 5.05 0.00 0.00 3.86
343 344 0.378257 CGAACATTGCCGGAATCCTG 59.622 55.000 5.05 0.00 0.00 3.86
344 345 1.376609 GCGAACATTGCCGGAATCCT 61.377 55.000 5.05 0.00 0.00 3.24
345 346 1.064134 GCGAACATTGCCGGAATCC 59.936 57.895 5.05 0.00 0.00 3.01
346 347 0.028110 GAGCGAACATTGCCGGAATC 59.972 55.000 5.05 0.00 0.00 2.52
347 348 0.676466 TGAGCGAACATTGCCGGAAT 60.676 50.000 5.05 0.00 0.00 3.01
348 349 1.298157 CTGAGCGAACATTGCCGGAA 61.298 55.000 5.05 0.00 0.00 4.30
349 350 1.741401 CTGAGCGAACATTGCCGGA 60.741 57.895 5.05 0.00 0.00 5.14
350 351 2.034879 ACTGAGCGAACATTGCCGG 61.035 57.895 0.00 0.00 0.00 6.13
351 352 1.133253 CACTGAGCGAACATTGCCG 59.867 57.895 0.00 0.00 0.00 5.69
352 353 0.110056 CACACTGAGCGAACATTGCC 60.110 55.000 0.00 0.00 0.00 4.52
353 354 0.867746 TCACACTGAGCGAACATTGC 59.132 50.000 0.00 0.00 0.00 3.56
354 355 2.738314 TCATCACACTGAGCGAACATTG 59.262 45.455 0.00 0.00 0.00 2.82
355 356 2.738846 GTCATCACACTGAGCGAACATT 59.261 45.455 0.00 0.00 0.00 2.71
356 357 2.289010 TGTCATCACACTGAGCGAACAT 60.289 45.455 0.00 0.00 0.00 2.71
357 358 1.068434 TGTCATCACACTGAGCGAACA 59.932 47.619 0.00 0.00 0.00 3.18
358 359 1.783284 TGTCATCACACTGAGCGAAC 58.217 50.000 0.00 0.00 0.00 3.95
368 369 2.301583 TCGATGGGAAAGTGTCATCACA 59.698 45.455 0.00 0.00 46.01 3.58
369 370 2.932614 CTCGATGGGAAAGTGTCATCAC 59.067 50.000 0.00 0.00 44.15 3.06
370 371 2.567169 ACTCGATGGGAAAGTGTCATCA 59.433 45.455 0.00 0.00 37.67 3.07
371 372 2.932614 CACTCGATGGGAAAGTGTCATC 59.067 50.000 0.00 0.00 36.50 2.92
372 373 2.936993 GCACTCGATGGGAAAGTGTCAT 60.937 50.000 3.94 0.00 41.90 3.06
373 374 1.608025 GCACTCGATGGGAAAGTGTCA 60.608 52.381 3.94 0.00 41.90 3.58
374 375 1.079503 GCACTCGATGGGAAAGTGTC 58.920 55.000 3.94 0.00 41.90 3.67
375 376 0.396435 TGCACTCGATGGGAAAGTGT 59.604 50.000 3.94 0.00 41.90 3.55
376 377 1.522668 TTGCACTCGATGGGAAAGTG 58.477 50.000 0.00 0.00 42.59 3.16
377 378 2.086869 CATTGCACTCGATGGGAAAGT 58.913 47.619 0.00 0.00 31.71 2.66
378 379 1.202222 GCATTGCACTCGATGGGAAAG 60.202 52.381 3.15 0.00 35.15 2.62
379 380 0.810648 GCATTGCACTCGATGGGAAA 59.189 50.000 3.15 0.00 35.15 3.13
380 381 1.368345 CGCATTGCACTCGATGGGAA 61.368 55.000 9.69 0.00 45.11 3.97
381 382 1.815003 CGCATTGCACTCGATGGGA 60.815 57.895 9.69 0.00 45.11 4.37
382 383 2.711311 CGCATTGCACTCGATGGG 59.289 61.111 9.69 0.00 39.62 4.00
383 384 2.023741 GCGCATTGCACTCGATGG 59.976 61.111 9.69 0.00 45.45 3.51
392 393 3.364441 TCACCACAGGCGCATTGC 61.364 61.111 10.83 0.00 45.38 3.56
393 394 1.518056 AAGTCACCACAGGCGCATTG 61.518 55.000 10.83 9.92 0.00 2.82
394 395 1.228245 AAGTCACCACAGGCGCATT 60.228 52.632 10.83 0.00 0.00 3.56
395 396 1.672356 GAAGTCACCACAGGCGCAT 60.672 57.895 10.83 0.00 0.00 4.73
396 397 2.280797 GAAGTCACCACAGGCGCA 60.281 61.111 10.83 0.00 0.00 6.09
397 398 3.414700 CGAAGTCACCACAGGCGC 61.415 66.667 0.00 0.00 0.00 6.53
398 399 2.029073 ACGAAGTCACCACAGGCG 59.971 61.111 0.00 0.00 29.74 5.52
399 400 0.531974 TTCACGAAGTCACCACAGGC 60.532 55.000 0.00 0.00 41.61 4.85
400 401 1.948104 TTTCACGAAGTCACCACAGG 58.052 50.000 0.00 0.00 41.61 4.00
401 402 3.393800 AGATTTCACGAAGTCACCACAG 58.606 45.455 5.27 0.00 41.61 3.66
402 403 3.181470 TGAGATTTCACGAAGTCACCACA 60.181 43.478 5.27 0.00 41.61 4.17
403 404 3.390135 TGAGATTTCACGAAGTCACCAC 58.610 45.455 5.27 0.00 41.61 4.16
404 405 3.744238 TGAGATTTCACGAAGTCACCA 57.256 42.857 5.27 0.74 41.61 4.17
405 406 4.307432 TCTTGAGATTTCACGAAGTCACC 58.693 43.478 5.27 0.00 41.61 4.02
406 407 5.406780 ACATCTTGAGATTTCACGAAGTCAC 59.593 40.000 5.27 0.00 35.52 3.67
407 408 5.541845 ACATCTTGAGATTTCACGAAGTCA 58.458 37.500 5.27 0.00 35.52 3.41
408 409 6.473397 AACATCTTGAGATTTCACGAAGTC 57.527 37.500 1.89 0.00 33.93 3.01
409 410 7.604164 ACATAACATCTTGAGATTTCACGAAGT 59.396 33.333 0.00 0.00 35.76 3.01
410 411 7.968246 ACATAACATCTTGAGATTTCACGAAG 58.032 34.615 0.00 0.00 35.52 3.79
411 412 7.201435 CGACATAACATCTTGAGATTTCACGAA 60.201 37.037 0.00 0.00 35.52 3.85
412 413 6.253512 CGACATAACATCTTGAGATTTCACGA 59.746 38.462 0.00 0.00 36.22 4.35
413 414 6.406018 CGACATAACATCTTGAGATTTCACG 58.594 40.000 0.00 0.00 31.71 4.35
414 415 6.709643 CCGACATAACATCTTGAGATTTCAC 58.290 40.000 0.00 0.00 31.71 3.18
415 416 5.294306 GCCGACATAACATCTTGAGATTTCA 59.706 40.000 0.00 0.00 31.21 2.69
416 417 5.525378 AGCCGACATAACATCTTGAGATTTC 59.475 40.000 0.00 0.00 31.21 2.17
417 418 5.431765 AGCCGACATAACATCTTGAGATTT 58.568 37.500 0.00 0.00 31.21 2.17
418 419 5.028549 AGCCGACATAACATCTTGAGATT 57.971 39.130 0.00 0.00 31.21 2.40
419 420 4.502259 GGAGCCGACATAACATCTTGAGAT 60.502 45.833 0.00 0.00 34.56 2.75
420 421 3.181475 GGAGCCGACATAACATCTTGAGA 60.181 47.826 0.00 0.00 0.00 3.27
421 422 3.126831 GGAGCCGACATAACATCTTGAG 58.873 50.000 0.00 0.00 0.00 3.02
422 423 2.481276 CGGAGCCGACATAACATCTTGA 60.481 50.000 2.00 0.00 42.83 3.02
423 424 1.860950 CGGAGCCGACATAACATCTTG 59.139 52.381 2.00 0.00 42.83 3.02
424 425 1.480954 ACGGAGCCGACATAACATCTT 59.519 47.619 16.83 0.00 42.83 2.40
425 426 1.067212 GACGGAGCCGACATAACATCT 59.933 52.381 16.83 0.00 42.83 2.90
426 427 1.067212 AGACGGAGCCGACATAACATC 59.933 52.381 16.83 0.00 42.83 3.06
427 428 1.067212 GAGACGGAGCCGACATAACAT 59.933 52.381 16.83 0.00 42.83 2.71
428 429 0.454600 GAGACGGAGCCGACATAACA 59.545 55.000 16.83 0.00 42.83 2.41
429 430 0.739561 AGAGACGGAGCCGACATAAC 59.260 55.000 16.83 3.38 42.83 1.89
430 431 1.022735 GAGAGACGGAGCCGACATAA 58.977 55.000 16.83 0.00 42.83 1.90
431 432 1.158484 CGAGAGACGGAGCCGACATA 61.158 60.000 16.83 0.00 42.83 2.29
432 433 2.473760 CGAGAGACGGAGCCGACAT 61.474 63.158 16.83 2.41 42.83 3.06
433 434 3.125573 CGAGAGACGGAGCCGACA 61.126 66.667 16.83 0.00 42.83 4.35
434 435 1.716826 ATTCGAGAGACGGAGCCGAC 61.717 60.000 16.83 9.76 41.84 4.79
435 436 1.451567 ATTCGAGAGACGGAGCCGA 60.452 57.895 16.83 0.00 41.84 5.54
444 445 2.562738 TCCTTTGAGCACATTCGAGAGA 59.437 45.455 0.00 0.00 39.20 3.10
453 454 2.364324 ACGTCTTACTCCTTTGAGCACA 59.636 45.455 0.00 0.00 42.74 4.57
461 462 1.893801 CACCCTCACGTCTTACTCCTT 59.106 52.381 0.00 0.00 0.00 3.36
474 475 1.937191 TGAGCATACACTCACCCTCA 58.063 50.000 0.00 0.00 41.72 3.86
548 549 5.906113 TCAACAAACATATACGGGCAATT 57.094 34.783 0.00 0.00 0.00 2.32
635 647 0.109132 CTGGGCCTTGTTGCGATTTC 60.109 55.000 4.53 0.00 0.00 2.17
675 687 3.928992 CAGCCTACTGTGTACACAATCAG 59.071 47.826 27.66 21.99 41.33 2.90
678 690 2.615493 GCCAGCCTACTGTGTACACAAT 60.615 50.000 27.66 21.69 42.81 2.71
682 694 0.895530 GAGCCAGCCTACTGTGTACA 59.104 55.000 0.00 0.00 42.81 2.90
690 702 2.176273 CGCATGTGAGCCAGCCTAC 61.176 63.158 0.00 0.00 0.00 3.18
726 738 1.077169 TCTACCAAGCCAGACTGAGGA 59.923 52.381 3.32 0.00 0.00 3.71
732 744 1.807142 GCAGTTTCTACCAAGCCAGAC 59.193 52.381 0.00 0.00 0.00 3.51
733 745 1.699634 AGCAGTTTCTACCAAGCCAGA 59.300 47.619 0.00 0.00 0.00 3.86
740 752 4.081697 TCGATGATTCAGCAGTTTCTACCA 60.082 41.667 2.47 0.00 0.00 3.25
749 761 6.364706 GGTAGAAACTATCGATGATTCAGCAG 59.635 42.308 8.54 0.00 0.00 4.24
753 765 6.628919 TCGGTAGAAACTATCGATGATTCA 57.371 37.500 8.54 0.00 0.00 2.57
818 830 4.388499 TCGCTTTCGCCCTGTCCC 62.388 66.667 0.00 0.00 35.26 4.46
819 831 2.815647 CTCGCTTTCGCCCTGTCC 60.816 66.667 0.00 0.00 35.26 4.02
820 832 3.491652 GCTCGCTTTCGCCCTGTC 61.492 66.667 0.00 0.00 35.26 3.51
846 1071 1.598130 GCCCGATTTCCATCTCCCG 60.598 63.158 0.00 0.00 0.00 5.14
890 1123 3.456277 AGTAAATGGGTGAGAGTGGGATC 59.544 47.826 0.00 0.00 0.00 3.36
977 1211 1.909302 CCTAGTCCACATTGAGGGTGT 59.091 52.381 0.00 0.00 34.46 4.16
1295 1537 1.144708 TGAAGGAACATGGCCACTTGA 59.855 47.619 8.16 0.00 0.00 3.02
1323 1565 2.557452 CCCTGAACCTTTGGTTATGGCT 60.557 50.000 1.61 0.00 46.95 4.75
1426 1668 5.066634 GTGACTTTATCATCTCTCGTCTGGA 59.933 44.000 0.00 0.00 40.28 3.86
1432 1674 5.518128 CAGTTGGTGACTTTATCATCTCTCG 59.482 44.000 0.00 0.00 39.44 4.04
1472 1714 3.130633 CGTCTTGGACTTGTGTGAATCA 58.869 45.455 0.00 0.00 0.00 2.57
1478 1720 2.028385 GGATACCGTCTTGGACTTGTGT 60.028 50.000 0.00 0.00 42.00 3.72
1663 1912 0.549902 TGCTTCCTCCCCCTGAATGA 60.550 55.000 0.00 0.00 0.00 2.57
1735 1986 0.035152 CCCAGACAGCCAGCACATAA 60.035 55.000 0.00 0.00 0.00 1.90
1798 2049 1.097547 GGATGTTGATGCCGTCTGGG 61.098 60.000 0.00 0.00 39.58 4.45
1800 2051 0.107508 AGGGATGTTGATGCCGTCTG 60.108 55.000 0.00 0.00 44.79 3.51
1801 2052 0.107508 CAGGGATGTTGATGCCGTCT 60.108 55.000 0.00 0.00 44.79 4.18
1802 2053 0.107703 TCAGGGATGTTGATGCCGTC 60.108 55.000 0.00 0.00 44.79 4.79
1803 2054 0.548031 ATCAGGGATGTTGATGCCGT 59.452 50.000 0.00 0.00 44.79 5.68
1804 2055 0.949397 CATCAGGGATGTTGATGCCG 59.051 55.000 2.67 0.00 44.79 5.69
1808 2059 4.581309 ACTTGTCATCAGGGATGTTGAT 57.419 40.909 6.15 0.00 40.55 2.57
1809 2060 4.042062 AGAACTTGTCATCAGGGATGTTGA 59.958 41.667 6.15 0.00 40.55 3.18
1810 2061 4.330250 AGAACTTGTCATCAGGGATGTTG 58.670 43.478 6.15 0.00 40.55 3.33
1811 2062 4.647564 AGAACTTGTCATCAGGGATGTT 57.352 40.909 6.15 0.00 40.55 2.71
1812 2063 4.780021 AGTAGAACTTGTCATCAGGGATGT 59.220 41.667 6.15 0.00 40.55 3.06
1813 2064 5.350504 AGTAGAACTTGTCATCAGGGATG 57.649 43.478 0.00 0.00 41.00 3.51
1814 2065 6.897966 TCTAAGTAGAACTTGTCATCAGGGAT 59.102 38.462 2.59 0.00 39.11 3.85
1815 2066 6.253758 TCTAAGTAGAACTTGTCATCAGGGA 58.746 40.000 2.59 0.00 39.11 4.20
1824 2093 6.651225 GCCAACATCTTCTAAGTAGAACTTGT 59.349 38.462 2.59 2.10 39.11 3.16
1835 2104 5.439721 ACATGCATAGCCAACATCTTCTAA 58.560 37.500 0.00 0.00 0.00 2.10
1884 2153 4.074627 TGTTCAGATGGTACGGTTTTCA 57.925 40.909 0.00 0.00 0.00 2.69
1985 2258 0.619832 TGAGAGCTCCAGATGCCCTT 60.620 55.000 10.93 0.00 0.00 3.95
1993 2266 3.902881 ACCTGTTATTGAGAGCTCCAG 57.097 47.619 10.93 8.45 0.00 3.86
2063 2337 7.112122 TCCAGAATGTAACATGCTAGAACAAT 58.888 34.615 0.00 0.00 0.00 2.71
2079 2353 4.445448 GCAGGATCCAGTTATCCAGAATGT 60.445 45.833 15.82 0.00 46.81 2.71
2087 2361 3.152341 CCCATTGCAGGATCCAGTTATC 58.848 50.000 15.82 0.00 0.00 1.75
2120 2394 1.349026 CTCTTCCTCTTCAGGCACCAA 59.651 52.381 0.00 0.00 40.12 3.67
2141 2415 0.817654 TCAAGATCGTCAGGCGTCAT 59.182 50.000 0.00 0.00 42.13 3.06
2169 2443 1.066716 CAAATGCCTCAACACCATGGG 60.067 52.381 18.09 7.72 0.00 4.00
2274 2560 1.753649 CCTCTGCTGCTACTCTTGCTA 59.246 52.381 0.00 0.00 0.00 3.49
2283 2583 0.336392 TTCCTCCTCCTCTGCTGCTA 59.664 55.000 0.00 0.00 0.00 3.49
2306 2686 1.082879 TCATCCCTCCCCTTCCTCTTT 59.917 52.381 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.