Multiple sequence alignment - TraesCS6A01G270100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G270100 chr6A 100.000 4998 0 0 1 4998 496470652 496475649 0.000000e+00 9230.0
1 TraesCS6A01G270100 chr6A 90.909 77 6 1 247 323 496470814 496470889 8.850000e-18 102.0
2 TraesCS6A01G270100 chr6A 90.909 77 6 1 163 238 496470898 496470974 8.850000e-18 102.0
3 TraesCS6A01G270100 chr6D 95.719 3294 87 22 877 4131 346957839 346954561 0.000000e+00 5252.0
4 TraesCS6A01G270100 chr6D 91.937 831 33 19 4187 4996 346954562 346953745 0.000000e+00 1133.0
5 TraesCS6A01G270100 chr6D 98.182 55 1 0 185 239 346957878 346957824 4.120000e-16 97.1
6 TraesCS6A01G270100 chr6D 86.076 79 11 0 50 128 318956885 318956807 8.910000e-13 86.1
7 TraesCS6A01G270100 chr6D 94.545 55 2 1 269 323 346957878 346957825 3.210000e-12 84.2
8 TraesCS6A01G270100 chr6B 94.883 3107 103 20 1058 4131 534091960 534095043 0.000000e+00 4806.0
9 TraesCS6A01G270100 chr6B 91.828 722 32 14 4288 4996 534095570 534096277 0.000000e+00 981.0
10 TraesCS6A01G270100 chr6B 90.000 140 11 2 877 1015 534091821 534091958 1.430000e-40 178.0
11 TraesCS6A01G270100 chr6B 95.556 90 1 2 4185 4272 534095040 534095128 1.880000e-29 141.0
12 TraesCS6A01G270100 chr6B 98.182 55 1 0 185 239 534091782 534091836 4.120000e-16 97.1
13 TraesCS6A01G270100 chr6B 96.226 53 2 0 4142 4194 400075878 400075930 2.480000e-13 87.9
14 TraesCS6A01G270100 chr6B 94.545 55 2 1 269 323 534091782 534091835 3.210000e-12 84.2
15 TraesCS6A01G270100 chr2A 77.296 577 89 22 337 881 2742315 2741749 8.130000e-78 302.0
16 TraesCS6A01G270100 chr2A 85.526 76 8 3 4146 4218 650624374 650624449 5.370000e-10 76.8
17 TraesCS6A01G270100 chr3B 81.717 361 54 4 516 874 581073923 581073573 1.760000e-74 291.0
18 TraesCS6A01G270100 chr3B 90.909 66 2 4 4142 4206 246157498 246157436 8.910000e-13 86.1
19 TraesCS6A01G270100 chr5A 80.593 371 54 11 516 881 635281180 635281537 2.290000e-68 270.0
20 TraesCS6A01G270100 chr5A 79.670 364 55 10 517 874 368130696 368131046 1.390000e-60 244.0
21 TraesCS6A01G270100 chr4B 80.054 371 57 11 516 881 604073071 604073429 4.960000e-65 259.0
22 TraesCS6A01G270100 chr4B 98.039 51 0 1 4138 4187 95218821 95218871 2.480000e-13 87.9
23 TraesCS6A01G270100 chr4B 93.478 46 1 2 842 885 437406600 437406645 3.230000e-07 67.6
24 TraesCS6A01G270100 chr3A 80.387 362 54 7 516 874 711256975 711256628 4.960000e-65 259.0
25 TraesCS6A01G270100 chr3A 86.986 146 12 3 27 166 681559639 681559495 1.860000e-34 158.0
26 TraesCS6A01G270100 chr3A 84.348 115 15 3 50 163 466781431 466781543 5.290000e-20 110.0
27 TraesCS6A01G270100 chrUn 80.460 348 54 7 530 874 156733297 156732961 2.310000e-63 254.0
28 TraesCS6A01G270100 chr7D 79.564 367 60 10 518 881 160871602 160871956 1.070000e-61 248.0
29 TraesCS6A01G270100 chr7D 74.132 576 101 28 324 874 219850965 219851517 1.420000e-45 195.0
30 TraesCS6A01G270100 chr7D 89.781 137 14 0 27 163 53449155 53449291 5.140000e-40 176.0
31 TraesCS6A01G270100 chr7B 79.200 375 64 5 513 883 741945480 741945844 1.070000e-61 248.0
32 TraesCS6A01G270100 chr7B 79.931 289 39 10 599 880 6182261 6181985 1.420000e-45 195.0
33 TraesCS6A01G270100 chr7B 77.273 286 48 13 590 872 637945587 637945316 8.670000e-33 152.0
34 TraesCS6A01G270100 chr3D 80.597 335 43 11 552 881 132274001 132273684 6.470000e-59 239.0
35 TraesCS6A01G270100 chr2D 78.552 373 60 11 516 881 404405817 404406176 1.400000e-55 228.0
36 TraesCS6A01G270100 chr2D 98.077 52 1 0 4142 4193 296852096 296852045 1.920000e-14 91.6
37 TraesCS6A01G270100 chr5D 86.726 113 13 2 50 161 507615411 507615522 1.890000e-24 124.0
38 TraesCS6A01G270100 chr1B 96.226 53 2 0 4142 4194 527834285 527834233 2.480000e-13 87.9
39 TraesCS6A01G270100 chr4D 94.444 54 3 0 4142 4195 76446851 76446904 3.210000e-12 84.2
40 TraesCS6A01G270100 chr1A 93.103 58 2 2 4142 4199 124484439 124484494 3.210000e-12 84.2
41 TraesCS6A01G270100 chr5B 91.667 60 4 1 4142 4201 554645045 554645103 1.150000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G270100 chr6A 496470652 496475649 4997 False 9230.000000 9230 100.000000 1 4998 1 chr6A.!!$F1 4997
1 TraesCS6A01G270100 chr6D 346953745 346957878 4133 True 1641.575000 5252 95.095750 185 4996 4 chr6D.!!$R2 4811
2 TraesCS6A01G270100 chr6B 534091782 534096277 4495 False 1047.883333 4806 94.165667 185 4996 6 chr6B.!!$F2 4811
3 TraesCS6A01G270100 chr2A 2741749 2742315 566 True 302.000000 302 77.296000 337 881 1 chr2A.!!$R1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 295 0.031178 CAGTGCCAACTTTCTGGTGC 59.969 55.000 0.00 0.00 38.86 5.01 F
765 795 0.108615 TTAGCTCGCTCCAGTGCTTC 60.109 55.000 0.00 0.00 40.77 3.86 F
769 799 0.246086 CTCGCTCCAGTGCTTCTTCT 59.754 55.000 0.00 0.00 0.00 2.85 F
804 834 0.395311 CTAGGTGGTCCACGGAGCTA 60.395 60.000 15.93 10.15 42.49 3.32 F
1090 1128 0.821517 TCGGAGATGTACACGGCAAT 59.178 50.000 0.00 0.00 0.00 3.56 F
2172 2262 0.959372 CCTCAGGCAGGCTGAGTTTG 60.959 60.000 38.42 26.00 44.88 2.93 F
3029 3119 1.212751 GCCAAAACCCGTGAGCATC 59.787 57.895 0.00 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 1803 0.321564 TCGAACAGTTCATGGGCAGG 60.322 55.000 13.82 0.00 0.00 4.85 R
2186 2276 1.774254 ACCTCAAGATTGGTGGTGACA 59.226 47.619 9.31 0.00 35.36 3.58 R
2700 2790 4.458989 AGCAAGGCATTTCGAGAATGTTAA 59.541 37.500 16.39 0.00 0.00 2.01 R
2752 2842 9.473007 CCCTTATCAGTGATTCTAGATAGATGA 57.527 37.037 11.68 0.00 31.40 2.92 R
3032 3122 1.065926 TCACGCTGCTCTTGATCCAAT 60.066 47.619 0.00 0.00 0.00 3.16 R
3308 3398 1.246737 GCTTTGGGAGAACAGGCTGG 61.247 60.000 20.34 0.58 0.00 4.85 R
4438 4963 0.248289 GCCAAATGCCATGCTGAGTT 59.752 50.000 0.00 0.00 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.438291 CATTTTGGCAGTCTTATATTTACTTCG 57.562 33.333 0.00 0.00 0.00 3.79
28 29 6.598753 TTGGCAGTCTTATATTTACTTCGC 57.401 37.500 0.00 0.00 0.00 4.70
29 30 4.743151 TGGCAGTCTTATATTTACTTCGCG 59.257 41.667 0.00 0.00 0.00 5.87
30 31 4.743644 GGCAGTCTTATATTTACTTCGCGT 59.256 41.667 5.77 0.00 0.00 6.01
31 32 5.107951 GGCAGTCTTATATTTACTTCGCGTC 60.108 44.000 5.77 0.00 0.00 5.19
32 33 5.107951 GCAGTCTTATATTTACTTCGCGTCC 60.108 44.000 5.77 0.00 0.00 4.79
33 34 5.115171 CAGTCTTATATTTACTTCGCGTCCG 59.885 44.000 5.77 0.00 0.00 4.79
34 35 4.380974 GTCTTATATTTACTTCGCGTCCGG 59.619 45.833 5.77 0.00 34.56 5.14
35 36 1.494824 ATATTTACTTCGCGTCCGGC 58.505 50.000 5.77 0.00 38.69 6.13
36 37 0.457035 TATTTACTTCGCGTCCGGCT 59.543 50.000 5.77 0.00 40.44 5.52
37 38 0.804933 ATTTACTTCGCGTCCGGCTC 60.805 55.000 5.77 0.00 40.44 4.70
38 39 2.824071 TTTACTTCGCGTCCGGCTCC 62.824 60.000 5.77 0.00 40.44 4.70
40 41 4.856607 CTTCGCGTCCGGCTCCTC 62.857 72.222 5.77 0.00 40.44 3.71
50 51 4.851214 GGCTCCTCTCCGCTCCCT 62.851 72.222 0.00 0.00 0.00 4.20
51 52 3.223589 GCTCCTCTCCGCTCCCTC 61.224 72.222 0.00 0.00 0.00 4.30
52 53 2.520741 CTCCTCTCCGCTCCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
53 54 3.347590 TCCTCTCCGCTCCCTCCA 61.348 66.667 0.00 0.00 0.00 3.86
54 55 3.151022 CCTCTCCGCTCCCTCCAC 61.151 72.222 0.00 0.00 0.00 4.02
55 56 2.043450 CTCTCCGCTCCCTCCACT 60.043 66.667 0.00 0.00 0.00 4.00
56 57 2.043852 TCTCCGCTCCCTCCACTC 60.044 66.667 0.00 0.00 0.00 3.51
57 58 3.151022 CTCCGCTCCCTCCACTCC 61.151 72.222 0.00 0.00 0.00 3.85
61 62 3.462678 GCTCCCTCCACTCCGGTC 61.463 72.222 0.00 0.00 35.57 4.79
62 63 2.760385 CTCCCTCCACTCCGGTCC 60.760 72.222 0.00 0.00 35.57 4.46
63 64 4.753662 TCCCTCCACTCCGGTCCG 62.754 72.222 3.60 3.60 35.57 4.79
82 83 3.151022 AGCGGACCAGGCTCTAGC 61.151 66.667 0.00 0.00 35.37 3.42
83 84 3.151022 GCGGACCAGGCTCTAGCT 61.151 66.667 1.39 0.00 41.70 3.32
84 85 3.124686 CGGACCAGGCTCTAGCTC 58.875 66.667 1.39 0.00 41.70 4.09
85 86 1.754621 CGGACCAGGCTCTAGCTCA 60.755 63.158 1.39 0.00 41.70 4.26
86 87 1.112315 CGGACCAGGCTCTAGCTCAT 61.112 60.000 1.39 0.00 41.70 2.90
87 88 1.127343 GGACCAGGCTCTAGCTCATT 58.873 55.000 1.39 0.00 41.70 2.57
88 89 1.488393 GGACCAGGCTCTAGCTCATTT 59.512 52.381 1.39 0.00 41.70 2.32
89 90 2.092699 GGACCAGGCTCTAGCTCATTTT 60.093 50.000 1.39 0.00 41.70 1.82
90 91 3.202097 GACCAGGCTCTAGCTCATTTTC 58.798 50.000 1.39 0.00 41.70 2.29
91 92 2.573462 ACCAGGCTCTAGCTCATTTTCA 59.427 45.455 1.39 0.00 41.70 2.69
92 93 2.941720 CCAGGCTCTAGCTCATTTTCAC 59.058 50.000 1.39 0.00 41.70 3.18
93 94 3.603532 CAGGCTCTAGCTCATTTTCACA 58.396 45.455 1.39 0.00 41.70 3.58
94 95 3.622163 CAGGCTCTAGCTCATTTTCACAG 59.378 47.826 1.39 0.00 41.70 3.66
95 96 3.517100 AGGCTCTAGCTCATTTTCACAGA 59.483 43.478 1.39 0.00 41.70 3.41
96 97 3.620821 GGCTCTAGCTCATTTTCACAGAC 59.379 47.826 1.39 0.00 41.70 3.51
97 98 3.305629 GCTCTAGCTCATTTTCACAGACG 59.694 47.826 0.00 0.00 38.21 4.18
98 99 4.489810 CTCTAGCTCATTTTCACAGACGT 58.510 43.478 0.00 0.00 0.00 4.34
99 100 4.883083 TCTAGCTCATTTTCACAGACGTT 58.117 39.130 0.00 0.00 0.00 3.99
100 101 5.297547 TCTAGCTCATTTTCACAGACGTTT 58.702 37.500 0.00 0.00 0.00 3.60
101 102 4.900635 AGCTCATTTTCACAGACGTTTT 57.099 36.364 0.00 0.00 0.00 2.43
102 103 4.601019 AGCTCATTTTCACAGACGTTTTG 58.399 39.130 0.00 0.00 0.00 2.44
103 104 3.730715 GCTCATTTTCACAGACGTTTTGG 59.269 43.478 0.00 0.00 0.00 3.28
104 105 3.701241 TCATTTTCACAGACGTTTTGGC 58.299 40.909 0.00 0.00 0.00 4.52
105 106 3.129462 TCATTTTCACAGACGTTTTGGCA 59.871 39.130 0.00 0.00 0.00 4.92
106 107 2.842208 TTTCACAGACGTTTTGGCAG 57.158 45.000 0.00 0.00 0.00 4.85
107 108 1.745232 TTCACAGACGTTTTGGCAGT 58.255 45.000 0.00 0.00 0.00 4.40
108 109 1.013596 TCACAGACGTTTTGGCAGTG 58.986 50.000 0.00 0.00 0.00 3.66
109 110 1.013596 CACAGACGTTTTGGCAGTGA 58.986 50.000 0.00 0.00 0.00 3.41
110 111 1.003545 CACAGACGTTTTGGCAGTGAG 60.004 52.381 0.00 0.00 0.00 3.51
111 112 0.040958 CAGACGTTTTGGCAGTGAGC 60.041 55.000 0.00 0.00 44.65 4.26
112 113 0.179045 AGACGTTTTGGCAGTGAGCT 60.179 50.000 0.00 0.00 44.79 4.09
113 114 0.235926 GACGTTTTGGCAGTGAGCTC 59.764 55.000 6.82 6.82 44.79 4.09
114 115 1.166531 ACGTTTTGGCAGTGAGCTCC 61.167 55.000 12.15 2.40 44.79 4.70
115 116 1.165907 CGTTTTGGCAGTGAGCTCCA 61.166 55.000 12.15 0.00 44.79 3.86
116 117 0.312102 GTTTTGGCAGTGAGCTCCAC 59.688 55.000 12.15 9.60 46.03 4.02
123 124 4.268687 GTGAGCTCCACAACTCCG 57.731 61.111 12.15 0.00 45.03 4.63
124 125 1.367840 GTGAGCTCCACAACTCCGT 59.632 57.895 12.15 0.00 45.03 4.69
125 126 0.946221 GTGAGCTCCACAACTCCGTG 60.946 60.000 12.15 0.00 45.03 4.94
136 137 3.686760 CTCCGTGGAGTCAGAGCA 58.313 61.111 7.79 0.00 37.47 4.26
137 138 1.510383 CTCCGTGGAGTCAGAGCAG 59.490 63.158 7.79 0.00 37.47 4.24
138 139 0.962855 CTCCGTGGAGTCAGAGCAGA 60.963 60.000 7.79 0.00 37.47 4.26
139 140 0.962855 TCCGTGGAGTCAGAGCAGAG 60.963 60.000 0.00 0.00 0.00 3.35
140 141 0.962855 CCGTGGAGTCAGAGCAGAGA 60.963 60.000 0.00 0.00 0.00 3.10
141 142 1.102154 CGTGGAGTCAGAGCAGAGAT 58.898 55.000 0.00 0.00 0.00 2.75
142 143 1.202279 CGTGGAGTCAGAGCAGAGATG 60.202 57.143 0.00 0.00 0.00 2.90
143 144 2.098614 GTGGAGTCAGAGCAGAGATGA 58.901 52.381 0.00 0.00 0.00 2.92
144 145 2.099592 GTGGAGTCAGAGCAGAGATGAG 59.900 54.545 0.00 0.00 0.00 2.90
145 146 1.682854 GGAGTCAGAGCAGAGATGAGG 59.317 57.143 0.00 0.00 0.00 3.86
146 147 1.682854 GAGTCAGAGCAGAGATGAGGG 59.317 57.143 0.00 0.00 0.00 4.30
147 148 1.287442 AGTCAGAGCAGAGATGAGGGA 59.713 52.381 0.00 0.00 0.00 4.20
148 149 2.091166 AGTCAGAGCAGAGATGAGGGAT 60.091 50.000 0.00 0.00 0.00 3.85
149 150 2.699846 GTCAGAGCAGAGATGAGGGATT 59.300 50.000 0.00 0.00 0.00 3.01
150 151 2.964464 TCAGAGCAGAGATGAGGGATTC 59.036 50.000 0.00 0.00 0.00 2.52
151 152 2.037511 CAGAGCAGAGATGAGGGATTCC 59.962 54.545 0.00 0.00 0.00 3.01
152 153 1.000731 GAGCAGAGATGAGGGATTCCG 59.999 57.143 0.00 0.00 38.33 4.30
153 154 1.043816 GCAGAGATGAGGGATTCCGA 58.956 55.000 0.00 0.00 38.33 4.55
154 155 1.414181 GCAGAGATGAGGGATTCCGAA 59.586 52.381 0.00 0.00 38.33 4.30
155 156 2.804933 GCAGAGATGAGGGATTCCGAAC 60.805 54.545 0.00 0.00 38.33 3.95
156 157 2.432146 CAGAGATGAGGGATTCCGAACA 59.568 50.000 0.00 0.00 38.33 3.18
157 158 3.107601 AGAGATGAGGGATTCCGAACAA 58.892 45.455 0.00 0.00 38.33 2.83
158 159 3.133721 AGAGATGAGGGATTCCGAACAAG 59.866 47.826 0.00 0.00 38.33 3.16
159 160 2.171448 AGATGAGGGATTCCGAACAAGG 59.829 50.000 0.00 0.00 38.33 3.61
160 161 0.035439 TGAGGGATTCCGAACAAGGC 60.035 55.000 0.00 0.00 38.33 4.35
161 162 0.748367 GAGGGATTCCGAACAAGGCC 60.748 60.000 0.00 0.00 38.33 5.19
162 163 1.208165 AGGGATTCCGAACAAGGCCT 61.208 55.000 0.00 0.00 38.33 5.19
163 164 0.323451 GGGATTCCGAACAAGGCCTT 60.323 55.000 13.78 13.78 0.00 4.35
164 165 1.064979 GGGATTCCGAACAAGGCCTTA 60.065 52.381 20.00 0.00 0.00 2.69
165 166 2.289565 GGATTCCGAACAAGGCCTTAG 58.710 52.381 20.00 15.05 0.00 2.18
166 167 2.289565 GATTCCGAACAAGGCCTTAGG 58.710 52.381 20.00 18.44 0.00 2.69
167 168 1.354101 TTCCGAACAAGGCCTTAGGA 58.646 50.000 20.00 20.37 0.00 2.94
168 169 1.354101 TCCGAACAAGGCCTTAGGAA 58.646 50.000 20.00 7.02 0.00 3.36
169 170 1.913419 TCCGAACAAGGCCTTAGGAAT 59.087 47.619 20.00 2.29 0.00 3.01
170 171 3.109151 TCCGAACAAGGCCTTAGGAATA 58.891 45.455 20.00 0.00 0.00 1.75
171 172 3.134081 TCCGAACAAGGCCTTAGGAATAG 59.866 47.826 20.00 6.42 0.00 1.73
172 173 3.134081 CCGAACAAGGCCTTAGGAATAGA 59.866 47.826 20.00 0.00 0.00 1.98
173 174 4.372656 CGAACAAGGCCTTAGGAATAGAG 58.627 47.826 20.00 4.78 0.00 2.43
174 175 4.709250 GAACAAGGCCTTAGGAATAGAGG 58.291 47.826 20.00 3.96 0.00 3.69
175 176 3.737263 ACAAGGCCTTAGGAATAGAGGT 58.263 45.455 20.00 4.69 33.03 3.85
176 177 3.456277 ACAAGGCCTTAGGAATAGAGGTG 59.544 47.826 20.00 3.95 33.03 4.00
177 178 2.695585 AGGCCTTAGGAATAGAGGTGG 58.304 52.381 0.00 0.00 33.03 4.61
178 179 2.021936 AGGCCTTAGGAATAGAGGTGGT 60.022 50.000 0.00 0.00 33.03 4.16
179 180 3.209152 AGGCCTTAGGAATAGAGGTGGTA 59.791 47.826 0.00 0.00 33.03 3.25
180 181 3.579151 GGCCTTAGGAATAGAGGTGGTAG 59.421 52.174 0.69 0.00 33.03 3.18
181 182 4.224762 GCCTTAGGAATAGAGGTGGTAGT 58.775 47.826 0.69 0.00 33.03 2.73
182 183 5.392125 GCCTTAGGAATAGAGGTGGTAGTA 58.608 45.833 0.69 0.00 33.03 1.82
183 184 5.243507 GCCTTAGGAATAGAGGTGGTAGTAC 59.756 48.000 0.69 0.00 33.03 2.73
224 225 6.662865 TTTCTGGTGCCATTTCTAAATGAA 57.337 33.333 15.37 2.70 46.72 2.57
225 226 6.662865 TTCTGGTGCCATTTCTAAATGAAA 57.337 33.333 15.37 2.40 46.72 2.69
226 227 6.662865 TCTGGTGCCATTTCTAAATGAAAA 57.337 33.333 15.37 0.26 46.72 2.29
227 228 7.060383 TCTGGTGCCATTTCTAAATGAAAAA 57.940 32.000 15.37 0.00 46.72 1.94
228 229 7.678837 TCTGGTGCCATTTCTAAATGAAAAAT 58.321 30.769 15.37 0.00 46.72 1.82
229 230 7.603404 TCTGGTGCCATTTCTAAATGAAAAATG 59.397 33.333 15.37 0.00 46.72 2.32
230 231 7.222872 TGGTGCCATTTCTAAATGAAAAATGT 58.777 30.769 15.37 0.00 46.72 2.71
231 232 8.370940 TGGTGCCATTTCTAAATGAAAAATGTA 58.629 29.630 15.37 0.00 46.72 2.29
232 233 9.382275 GGTGCCATTTCTAAATGAAAAATGTAT 57.618 29.630 15.37 0.00 46.72 2.29
234 235 9.598517 TGCCATTTCTAAATGAAAAATGTATCC 57.401 29.630 15.37 0.00 46.72 2.59
235 236 9.598517 GCCATTTCTAAATGAAAAATGTATCCA 57.401 29.630 15.37 0.00 46.72 3.41
257 258 8.737168 TCCACAGATGTTATTTAGAAATGGAG 57.263 34.615 0.00 0.00 0.00 3.86
258 259 7.775093 TCCACAGATGTTATTTAGAAATGGAGG 59.225 37.037 0.00 0.00 0.00 4.30
259 260 7.557719 CCACAGATGTTATTTAGAAATGGAGGT 59.442 37.037 0.00 0.00 0.00 3.85
260 261 9.613428 CACAGATGTTATTTAGAAATGGAGGTA 57.387 33.333 0.00 0.00 0.00 3.08
261 262 9.838339 ACAGATGTTATTTAGAAATGGAGGTAG 57.162 33.333 0.00 0.00 0.00 3.18
262 263 9.838339 CAGATGTTATTTAGAAATGGAGGTAGT 57.162 33.333 0.00 0.00 0.00 2.73
277 278 9.742144 AATGGAGGTAGTAGTACTATGTATCAG 57.258 37.037 13.09 0.00 32.65 2.90
278 279 8.272659 TGGAGGTAGTAGTACTATGTATCAGT 57.727 38.462 13.09 0.00 32.65 3.41
279 280 8.155510 TGGAGGTAGTAGTACTATGTATCAGTG 58.844 40.741 13.09 0.00 32.65 3.66
280 281 7.119553 GGAGGTAGTAGTACTATGTATCAGTGC 59.880 44.444 13.09 0.00 32.65 4.40
281 282 6.941436 AGGTAGTAGTACTATGTATCAGTGCC 59.059 42.308 13.09 5.88 32.65 5.01
282 283 6.713903 GGTAGTAGTACTATGTATCAGTGCCA 59.286 42.308 13.09 0.00 32.65 4.92
283 284 7.230108 GGTAGTAGTACTATGTATCAGTGCCAA 59.770 40.741 13.09 0.00 32.65 4.52
284 285 7.040473 AGTAGTACTATGTATCAGTGCCAAC 57.960 40.000 5.75 0.00 29.78 3.77
285 286 6.834451 AGTAGTACTATGTATCAGTGCCAACT 59.166 38.462 5.75 0.00 36.98 3.16
286 287 6.546428 AGTACTATGTATCAGTGCCAACTT 57.454 37.500 0.00 0.00 32.98 2.66
287 288 6.947464 AGTACTATGTATCAGTGCCAACTTT 58.053 36.000 0.00 0.00 32.98 2.66
288 289 7.042335 AGTACTATGTATCAGTGCCAACTTTC 58.958 38.462 0.00 0.00 32.98 2.62
289 290 6.054860 ACTATGTATCAGTGCCAACTTTCT 57.945 37.500 0.00 0.00 32.98 2.52
290 291 5.877012 ACTATGTATCAGTGCCAACTTTCTG 59.123 40.000 0.00 0.00 32.98 3.02
291 292 3.411446 TGTATCAGTGCCAACTTTCTGG 58.589 45.455 0.00 0.00 39.71 3.86
292 293 2.664402 ATCAGTGCCAACTTTCTGGT 57.336 45.000 0.00 0.00 38.86 4.00
293 294 1.679139 TCAGTGCCAACTTTCTGGTG 58.321 50.000 0.00 0.00 38.86 4.17
294 295 0.031178 CAGTGCCAACTTTCTGGTGC 59.969 55.000 0.00 0.00 38.86 5.01
295 296 1.109323 AGTGCCAACTTTCTGGTGCC 61.109 55.000 0.00 0.00 38.86 5.01
296 297 1.076412 TGCCAACTTTCTGGTGCCA 60.076 52.632 0.00 0.00 38.86 4.92
297 298 0.469705 TGCCAACTTTCTGGTGCCAT 60.470 50.000 0.00 0.00 38.86 4.40
298 299 0.681175 GCCAACTTTCTGGTGCCATT 59.319 50.000 0.00 0.00 38.86 3.16
299 300 1.070601 GCCAACTTTCTGGTGCCATTT 59.929 47.619 0.00 0.00 38.86 2.32
300 301 2.867647 GCCAACTTTCTGGTGCCATTTC 60.868 50.000 0.00 0.00 38.86 2.17
301 302 2.629617 CCAACTTTCTGGTGCCATTTCT 59.370 45.455 0.00 0.00 30.42 2.52
302 303 3.826157 CCAACTTTCTGGTGCCATTTCTA 59.174 43.478 0.00 0.00 30.42 2.10
303 304 4.280677 CCAACTTTCTGGTGCCATTTCTAA 59.719 41.667 0.00 0.00 30.42 2.10
304 305 5.221422 CCAACTTTCTGGTGCCATTTCTAAA 60.221 40.000 0.00 0.00 30.42 1.85
305 306 6.458210 CAACTTTCTGGTGCCATTTCTAAAT 58.542 36.000 0.00 0.00 0.00 1.40
306 307 6.029346 ACTTTCTGGTGCCATTTCTAAATG 57.971 37.500 8.21 8.21 44.12 2.32
307 308 5.774690 ACTTTCTGGTGCCATTTCTAAATGA 59.225 36.000 15.37 0.00 46.72 2.57
308 309 6.267471 ACTTTCTGGTGCCATTTCTAAATGAA 59.733 34.615 15.37 2.70 46.72 2.57
309 310 6.662865 TTCTGGTGCCATTTCTAAATGAAA 57.337 33.333 15.37 2.40 46.72 2.69
310 311 6.662865 TCTGGTGCCATTTCTAAATGAAAA 57.337 33.333 15.37 0.26 46.72 2.29
311 312 7.060383 TCTGGTGCCATTTCTAAATGAAAAA 57.940 32.000 15.37 0.00 46.72 1.94
312 313 7.678837 TCTGGTGCCATTTCTAAATGAAAAAT 58.321 30.769 15.37 0.00 46.72 1.82
313 314 8.156165 TCTGGTGCCATTTCTAAATGAAAAATT 58.844 29.630 15.37 0.00 46.72 1.82
314 315 8.097078 TGGTGCCATTTCTAAATGAAAAATTG 57.903 30.769 15.37 0.51 46.72 2.32
315 316 7.022979 GGTGCCATTTCTAAATGAAAAATTGC 58.977 34.615 15.37 9.39 46.72 3.56
316 317 7.308469 GGTGCCATTTCTAAATGAAAAATTGCA 60.308 33.333 15.37 11.42 46.72 4.08
317 318 8.238631 GTGCCATTTCTAAATGAAAAATTGCAT 58.761 29.630 15.37 0.00 46.72 3.96
318 319 8.452534 TGCCATTTCTAAATGAAAAATTGCATC 58.547 29.630 15.37 0.00 46.72 3.91
319 320 7.911727 GCCATTTCTAAATGAAAAATTGCATCC 59.088 33.333 15.37 0.00 46.72 3.51
320 321 8.948145 CCATTTCTAAATGAAAAATTGCATCCA 58.052 29.630 15.37 0.00 46.72 3.41
321 322 9.763465 CATTTCTAAATGAAAAATTGCATCCAC 57.237 29.630 9.37 0.00 46.72 4.02
322 323 8.899427 TTTCTAAATGAAAAATTGCATCCACA 57.101 26.923 0.00 0.00 41.23 4.17
323 324 9.504708 TTTCTAAATGAAAAATTGCATCCACAT 57.495 25.926 0.00 0.00 41.23 3.21
324 325 8.706492 TCTAAATGAAAAATTGCATCCACATC 57.294 30.769 0.00 0.00 0.00 3.06
325 326 6.411630 AAATGAAAAATTGCATCCACATCG 57.588 33.333 0.00 0.00 0.00 3.84
326 327 4.780275 TGAAAAATTGCATCCACATCGA 57.220 36.364 0.00 0.00 0.00 3.59
327 328 5.327616 TGAAAAATTGCATCCACATCGAT 57.672 34.783 0.00 0.00 0.00 3.59
328 329 5.103687 TGAAAAATTGCATCCACATCGATG 58.896 37.500 23.68 23.68 42.20 3.84
329 330 3.720949 AAATTGCATCCACATCGATGG 57.279 42.857 28.09 14.43 40.08 3.51
330 331 2.353357 ATTGCATCCACATCGATGGT 57.647 45.000 28.09 11.93 40.08 3.55
331 332 1.667236 TTGCATCCACATCGATGGTC 58.333 50.000 28.09 11.07 40.08 4.02
332 333 0.832626 TGCATCCACATCGATGGTCT 59.167 50.000 28.09 5.74 40.08 3.85
333 334 1.210234 TGCATCCACATCGATGGTCTT 59.790 47.619 28.09 5.36 40.08 3.01
334 335 1.869767 GCATCCACATCGATGGTCTTC 59.130 52.381 28.09 9.70 40.08 2.87
335 336 2.130395 CATCCACATCGATGGTCTTCG 58.870 52.381 28.09 9.13 40.95 3.79
349 350 2.609299 TTCGGGCCATGGAGGTGA 60.609 61.111 18.40 3.95 40.61 4.02
354 355 2.191641 GCCATGGAGGTGAGGAGC 59.808 66.667 18.40 0.00 40.61 4.70
356 357 1.222936 CCATGGAGGTGAGGAGCAC 59.777 63.158 5.56 0.00 46.98 4.40
390 392 1.991230 CGGGAGGGACCATGTTCTT 59.009 57.895 0.00 0.00 41.20 2.52
391 393 1.200519 CGGGAGGGACCATGTTCTTA 58.799 55.000 0.00 0.00 41.20 2.10
394 396 3.371595 CGGGAGGGACCATGTTCTTATTT 60.372 47.826 0.00 0.00 41.20 1.40
403 405 8.749354 GGGACCATGTTCTTATTTTTGTTAGAT 58.251 33.333 0.00 0.00 0.00 1.98
421 423 2.299867 AGATTCATTGTGTTGGTTGGGC 59.700 45.455 0.00 0.00 0.00 5.36
428 431 1.034838 GTGTTGGTTGGGCTGTGTGA 61.035 55.000 0.00 0.00 0.00 3.58
463 466 5.302313 GTCCCTCGGTAGAAATAATGTCTCT 59.698 44.000 0.00 0.00 0.00 3.10
466 469 6.210078 CCTCGGTAGAAATAATGTCTCTCAC 58.790 44.000 0.00 0.00 0.00 3.51
470 473 6.530534 CGGTAGAAATAATGTCTCTCACGTTT 59.469 38.462 0.00 0.00 35.68 3.60
479 482 3.006110 TGTCTCTCACGTTTTATTCCCGT 59.994 43.478 0.00 0.00 34.71 5.28
480 483 3.611549 GTCTCTCACGTTTTATTCCCGTC 59.388 47.826 0.00 0.00 31.46 4.79
482 485 2.299582 TCTCACGTTTTATTCCCGTCCA 59.700 45.455 0.00 0.00 31.46 4.02
484 487 2.037511 TCACGTTTTATTCCCGTCCAGT 59.962 45.455 0.00 0.00 31.46 4.00
509 538 1.795889 GCGTCTAGCTTTGTCGGAGAG 60.796 57.143 0.00 0.00 44.04 3.20
511 540 1.202582 GTCTAGCTTTGTCGGAGAGCA 59.797 52.381 0.00 0.00 36.95 4.26
514 543 0.322975 AGCTTTGTCGGAGAGCATGT 59.677 50.000 9.66 0.00 36.95 3.21
521 550 0.465705 TCGGAGAGCATGTGGGATTC 59.534 55.000 0.00 0.00 0.00 2.52
523 552 0.179000 GGAGAGCATGTGGGATTCGT 59.821 55.000 0.00 0.00 0.00 3.85
526 555 1.278985 AGAGCATGTGGGATTCGTTCA 59.721 47.619 0.00 0.00 0.00 3.18
528 557 0.734889 GCATGTGGGATTCGTTCAGG 59.265 55.000 0.00 0.00 0.00 3.86
538 567 0.472471 TTCGTTCAGGGCTGGTCTTT 59.528 50.000 0.00 0.00 0.00 2.52
545 574 1.603739 GGGCTGGTCTTTGGTGGAC 60.604 63.158 0.00 0.00 0.00 4.02
557 586 1.455822 TGGTGGACCCTTTTGGATCT 58.544 50.000 0.00 0.00 44.07 2.75
563 592 2.041755 GGACCCTTTTGGATCTGGTCTT 59.958 50.000 6.91 0.00 43.94 3.01
574 603 3.576648 GATCTGGTCTTCGTTCGTCTTT 58.423 45.455 0.00 0.00 0.00 2.52
575 604 3.009301 TCTGGTCTTCGTTCGTCTTTC 57.991 47.619 0.00 0.00 0.00 2.62
579 608 3.554324 TGGTCTTCGTTCGTCTTTCTTTG 59.446 43.478 0.00 0.00 0.00 2.77
629 659 2.098607 ACGACTTCTTTCATCGGCGATA 59.901 45.455 23.53 4.95 40.16 2.92
636 666 1.570813 TTCATCGGCGATAGTTGCTG 58.429 50.000 23.53 10.18 40.13 4.41
639 669 0.179073 ATCGGCGATAGTTGCTGCTT 60.179 50.000 22.68 0.00 38.62 3.91
640 670 0.806102 TCGGCGATAGTTGCTGCTTC 60.806 55.000 4.99 0.00 38.62 3.86
647 677 2.709125 TAGTTGCTGCTTCGGTGCGT 62.709 55.000 0.00 0.00 35.36 5.24
655 685 1.290955 CTTCGGTGCGTTGGTCCTA 59.709 57.895 0.00 0.00 0.00 2.94
678 708 1.336609 GGGTCTTAGCACGACGACTTT 60.337 52.381 0.00 0.00 32.24 2.66
680 710 2.351544 GGTCTTAGCACGACGACTTTCT 60.352 50.000 0.00 0.00 32.24 2.52
683 713 3.190744 TCTTAGCACGACGACTTTCTGAT 59.809 43.478 0.00 0.00 0.00 2.90
715 745 3.701532 ACAAAATTTGTTCGGCTTCGA 57.298 38.095 5.41 0.00 42.22 3.71
716 746 3.368495 ACAAAATTTGTTCGGCTTCGAC 58.632 40.909 5.41 0.00 42.22 4.20
723 753 2.050350 TTCGGCTTCGACGAGGGAT 61.050 57.895 9.18 0.00 46.39 3.85
727 757 2.722201 GCTTCGACGAGGGATGGGT 61.722 63.158 9.18 0.00 0.00 4.51
739 769 3.385749 GATGGGTGATGACGGCGGT 62.386 63.158 13.24 0.00 0.00 5.68
744 774 4.002506 TGATGACGGCGGTGCACT 62.003 61.111 17.98 0.00 0.00 4.40
747 777 1.852067 GATGACGGCGGTGCACTTTT 61.852 55.000 17.98 0.00 0.00 2.27
748 778 0.604243 ATGACGGCGGTGCACTTTTA 60.604 50.000 17.98 0.00 0.00 1.52
765 795 0.108615 TTAGCTCGCTCCAGTGCTTC 60.109 55.000 0.00 0.00 40.77 3.86
766 796 0.967887 TAGCTCGCTCCAGTGCTTCT 60.968 55.000 0.00 0.00 40.77 2.85
767 797 1.375268 GCTCGCTCCAGTGCTTCTT 60.375 57.895 0.00 0.00 0.00 2.52
768 798 1.357991 GCTCGCTCCAGTGCTTCTTC 61.358 60.000 0.00 0.00 0.00 2.87
769 799 0.246086 CTCGCTCCAGTGCTTCTTCT 59.754 55.000 0.00 0.00 0.00 2.85
770 800 1.474478 CTCGCTCCAGTGCTTCTTCTA 59.526 52.381 0.00 0.00 0.00 2.10
771 801 1.474478 TCGCTCCAGTGCTTCTTCTAG 59.526 52.381 0.00 0.00 0.00 2.43
772 802 1.474478 CGCTCCAGTGCTTCTTCTAGA 59.526 52.381 0.00 0.00 0.00 2.43
773 803 2.733858 CGCTCCAGTGCTTCTTCTAGAC 60.734 54.545 0.00 0.00 0.00 2.59
774 804 2.495669 GCTCCAGTGCTTCTTCTAGACT 59.504 50.000 0.00 0.00 0.00 3.24
775 805 3.428862 GCTCCAGTGCTTCTTCTAGACTC 60.429 52.174 0.00 0.00 0.00 3.36
794 824 0.656785 CTAGTCGTCGCTAGGTGGTC 59.343 60.000 12.93 0.00 35.89 4.02
795 825 0.745845 TAGTCGTCGCTAGGTGGTCC 60.746 60.000 0.00 0.00 0.00 4.46
798 828 2.181021 GTCGCTAGGTGGTCCACG 59.819 66.667 15.93 4.19 34.83 4.94
801 831 2.893398 GCTAGGTGGTCCACGGAG 59.107 66.667 15.93 15.19 34.83 4.63
802 832 2.893398 CTAGGTGGTCCACGGAGC 59.107 66.667 15.93 8.36 42.37 4.70
804 834 0.395311 CTAGGTGGTCCACGGAGCTA 60.395 60.000 15.93 10.15 42.49 3.32
811 841 1.135170 GGTCCACGGAGCTAGTTGTAC 60.135 57.143 8.03 0.00 39.31 2.90
821 851 9.095065 CACGGAGCTAGTTGTACTTTTTATTAT 57.905 33.333 0.00 0.00 0.00 1.28
822 852 9.095065 ACGGAGCTAGTTGTACTTTTTATTATG 57.905 33.333 0.00 0.00 0.00 1.90
829 859 8.863872 AGTTGTACTTTTTATTATGTCTGGCT 57.136 30.769 0.00 0.00 0.00 4.75
853 884 1.913778 TGTGCTGGCATGATTGAAGT 58.086 45.000 0.00 0.00 0.00 3.01
900 931 4.668576 AATGCATCTACACAGTTTCGTG 57.331 40.909 0.00 0.00 42.81 4.35
1090 1128 0.821517 TCGGAGATGTACACGGCAAT 59.178 50.000 0.00 0.00 0.00 3.56
1243 1284 1.377333 CTTCTTCCCCACCTTCGCC 60.377 63.158 0.00 0.00 0.00 5.54
1392 1433 3.507009 GGACGAGGAGGACGACGG 61.507 72.222 0.00 0.00 34.70 4.79
1683 1724 3.075005 TACCCTCGCAGGCTCACC 61.075 66.667 0.00 0.00 32.73 4.02
1684 1725 3.897681 TACCCTCGCAGGCTCACCA 62.898 63.158 0.00 0.00 39.06 4.17
1685 1726 4.767255 CCCTCGCAGGCTCACCAC 62.767 72.222 0.00 0.00 39.06 4.16
1688 1729 4.662961 TCGCAGGCTCACCACACG 62.663 66.667 0.00 0.00 39.06 4.49
1716 1765 2.169769 TCCCTCCCATAACATGTTCGAC 59.830 50.000 15.85 0.00 0.00 4.20
1719 1768 4.501571 CCCTCCCATAACATGTTCGACTAG 60.502 50.000 15.85 8.55 0.00 2.57
1721 1770 5.006153 TCCCATAACATGTTCGACTAGTG 57.994 43.478 15.85 4.17 0.00 2.74
1722 1771 4.707934 TCCCATAACATGTTCGACTAGTGA 59.292 41.667 15.85 0.00 0.00 3.41
1723 1772 5.362717 TCCCATAACATGTTCGACTAGTGAT 59.637 40.000 15.85 0.00 0.00 3.06
1728 1777 5.242069 ACATGTTCGACTAGTGATCTCTG 57.758 43.478 0.00 0.97 0.00 3.35
1729 1778 4.702612 ACATGTTCGACTAGTGATCTCTGT 59.297 41.667 0.00 3.97 0.00 3.41
1730 1779 5.880887 ACATGTTCGACTAGTGATCTCTGTA 59.119 40.000 0.00 0.00 0.00 2.74
1731 1780 6.037720 ACATGTTCGACTAGTGATCTCTGTAG 59.962 42.308 0.00 0.72 0.00 2.74
1734 1783 4.361420 TCGACTAGTGATCTCTGTAGACG 58.639 47.826 0.00 9.58 33.57 4.18
1744 1793 7.067615 AGTGATCTCTGTAGACGTATGTTCATT 59.932 37.037 0.00 0.00 33.57 2.57
1754 1803 6.899114 AGACGTATGTTCATTTGGTTTCTTC 58.101 36.000 0.00 0.00 0.00 2.87
1783 1832 1.529438 GAACTGTTCGACGAATTGCCA 59.471 47.619 14.27 6.03 0.00 4.92
2172 2262 0.959372 CCTCAGGCAGGCTGAGTTTG 60.959 60.000 38.42 26.00 44.88 2.93
2186 2276 4.757149 GCTGAGTTTGTCTACCACAATCTT 59.243 41.667 0.80 0.00 44.77 2.40
2667 2757 2.042686 TCTTGCCCTGATGTACATGC 57.957 50.000 14.43 10.94 0.00 4.06
2752 2842 5.527582 GCCGTCCAAATAGAATCTTGTACAT 59.472 40.000 0.00 0.00 0.00 2.29
2981 3071 2.550180 GTTGGAAGAACTTCAGACTGGC 59.450 50.000 15.02 0.00 41.20 4.85
3029 3119 1.212751 GCCAAAACCCGTGAGCATC 59.787 57.895 0.00 0.00 0.00 3.91
3251 3341 6.810911 TGAGAGCAAGATACCTTATGAGTTC 58.189 40.000 0.00 0.00 0.00 3.01
3275 3365 8.506168 TCTCAACCATACCTCATTTACATTTC 57.494 34.615 0.00 0.00 0.00 2.17
3290 3380 3.964909 ACATTTCGGTTTCTTTGCTGAC 58.035 40.909 0.00 0.00 0.00 3.51
3308 3398 4.320567 GCTGACCAGTTCTTTCTAAAAGGC 60.321 45.833 0.00 0.00 0.00 4.35
3384 3474 1.337118 TTGGTTCATGTTTGGAGGCC 58.663 50.000 0.00 0.00 0.00 5.19
3395 3485 0.321671 TTGGAGGCCTCAAACTCTCG 59.678 55.000 33.29 0.00 34.22 4.04
3701 3791 2.501723 TGAAGAGTGAATACCAGGGAGC 59.498 50.000 0.00 0.00 0.00 4.70
3956 4046 0.605050 GCTCTGCCCTTATAGCCTGC 60.605 60.000 0.00 0.00 0.00 4.85
4055 4149 5.711976 CCTACAGATTGATCAGGGTTTTGTT 59.288 40.000 0.00 0.00 0.00 2.83
4086 4180 7.462571 ACTTTTACTTTGTTGTTCACCTTCT 57.537 32.000 0.00 0.00 0.00 2.85
4089 4183 9.503427 CTTTTACTTTGTTGTTCACCTTCTTAG 57.497 33.333 0.00 0.00 0.00 2.18
4091 4185 9.669887 TTTACTTTGTTGTTCACCTTCTTAGTA 57.330 29.630 0.00 0.00 0.00 1.82
4128 4224 4.415881 ACATGTTGCCCGTATTGATCTA 57.584 40.909 0.00 0.00 0.00 1.98
4129 4225 4.127171 ACATGTTGCCCGTATTGATCTAC 58.873 43.478 0.00 0.00 0.00 2.59
4130 4226 3.188159 TGTTGCCCGTATTGATCTACC 57.812 47.619 0.00 0.00 0.00 3.18
4131 4227 2.158871 TGTTGCCCGTATTGATCTACCC 60.159 50.000 0.00 0.00 0.00 3.69
4132 4228 1.053424 TGCCCGTATTGATCTACCCC 58.947 55.000 0.00 0.00 0.00 4.95
4133 4229 0.323957 GCCCGTATTGATCTACCCCC 59.676 60.000 0.00 0.00 0.00 5.40
4134 4230 2.025636 CCCGTATTGATCTACCCCCT 57.974 55.000 0.00 0.00 0.00 4.79
4135 4231 1.900486 CCCGTATTGATCTACCCCCTC 59.100 57.143 0.00 0.00 0.00 4.30
4136 4232 1.900486 CCGTATTGATCTACCCCCTCC 59.100 57.143 0.00 0.00 0.00 4.30
4137 4233 2.605257 CGTATTGATCTACCCCCTCCA 58.395 52.381 0.00 0.00 0.00 3.86
4138 4234 3.173965 CGTATTGATCTACCCCCTCCAT 58.826 50.000 0.00 0.00 0.00 3.41
4139 4235 4.350245 CGTATTGATCTACCCCCTCCATA 58.650 47.826 0.00 0.00 0.00 2.74
4140 4236 4.775780 CGTATTGATCTACCCCCTCCATAA 59.224 45.833 0.00 0.00 0.00 1.90
4141 4237 5.247564 CGTATTGATCTACCCCCTCCATAAA 59.752 44.000 0.00 0.00 0.00 1.40
4142 4238 6.239772 CGTATTGATCTACCCCCTCCATAAAA 60.240 42.308 0.00 0.00 0.00 1.52
4143 4239 6.606241 ATTGATCTACCCCCTCCATAAAAA 57.394 37.500 0.00 0.00 0.00 1.94
4144 4240 5.646692 TGATCTACCCCCTCCATAAAAAG 57.353 43.478 0.00 0.00 0.00 2.27
4145 4241 5.043762 TGATCTACCCCCTCCATAAAAAGT 58.956 41.667 0.00 0.00 0.00 2.66
4146 4242 6.214278 TGATCTACCCCCTCCATAAAAAGTA 58.786 40.000 0.00 0.00 0.00 2.24
4147 4243 6.329197 TGATCTACCCCCTCCATAAAAAGTAG 59.671 42.308 0.00 0.00 0.00 2.57
4148 4244 5.606761 TCTACCCCCTCCATAAAAAGTAGT 58.393 41.667 0.00 0.00 0.00 2.73
4149 4245 4.586306 ACCCCCTCCATAAAAAGTAGTG 57.414 45.455 0.00 0.00 0.00 2.74
4150 4246 4.180723 ACCCCCTCCATAAAAAGTAGTGA 58.819 43.478 0.00 0.00 0.00 3.41
4151 4247 4.794067 ACCCCCTCCATAAAAAGTAGTGAT 59.206 41.667 0.00 0.00 0.00 3.06
4152 4248 5.104067 ACCCCCTCCATAAAAAGTAGTGATC 60.104 44.000 0.00 0.00 0.00 2.92
4153 4249 5.132816 CCCCCTCCATAAAAAGTAGTGATCT 59.867 44.000 0.00 0.00 0.00 2.75
4154 4250 6.329197 CCCCCTCCATAAAAAGTAGTGATCTA 59.671 42.308 0.00 0.00 0.00 1.98
4155 4251 7.147373 CCCCCTCCATAAAAAGTAGTGATCTAA 60.147 40.741 0.00 0.00 0.00 2.10
4156 4252 8.272173 CCCCTCCATAAAAAGTAGTGATCTAAA 58.728 37.037 0.00 0.00 0.00 1.85
4157 4253 9.110502 CCCTCCATAAAAAGTAGTGATCTAAAC 57.889 37.037 0.00 0.00 0.00 2.01
4158 4254 9.667107 CCTCCATAAAAAGTAGTGATCTAAACA 57.333 33.333 0.00 0.00 0.00 2.83
4181 4277 9.892130 AACACTCTTATATTTCTTTACAGAGGG 57.108 33.333 0.00 0.00 36.55 4.30
4182 4278 9.268282 ACACTCTTATATTTCTTTACAGAGGGA 57.732 33.333 2.59 0.00 34.50 4.20
4183 4279 9.757227 CACTCTTATATTTCTTTACAGAGGGAG 57.243 37.037 0.00 0.00 32.92 4.30
4244 4343 8.598041 ACTAGACTAGACAGAAAATTTGTGGAT 58.402 33.333 16.55 0.00 0.00 3.41
4369 4894 6.645003 TGTCGCTAATGGCAGTACATAATAAG 59.355 38.462 0.00 0.00 41.91 1.73
4407 4932 1.099879 GTCCCATGATGTCTGGCAGC 61.100 60.000 10.34 5.78 32.08 5.25
4438 4963 7.669089 AAAACATTTACCCTTCCAGAAAGAA 57.331 32.000 0.00 0.00 37.12 2.52
4439 4964 7.669089 AAACATTTACCCTTCCAGAAAGAAA 57.331 32.000 0.00 0.00 37.12 2.52
4441 4966 6.373759 ACATTTACCCTTCCAGAAAGAAACT 58.626 36.000 0.00 0.00 37.12 2.66
4444 4969 4.092116 ACCCTTCCAGAAAGAAACTCAG 57.908 45.455 0.00 0.00 37.12 3.35
4446 4971 3.480470 CCTTCCAGAAAGAAACTCAGCA 58.520 45.455 0.00 0.00 37.12 4.41
4447 4972 4.077822 CCTTCCAGAAAGAAACTCAGCAT 58.922 43.478 0.00 0.00 37.12 3.79
4481 5006 6.426328 GCAGCATCTTAGCTAGTGATTACATT 59.574 38.462 8.14 0.00 44.54 2.71
4482 5007 7.600375 GCAGCATCTTAGCTAGTGATTACATTA 59.400 37.037 8.14 0.00 44.54 1.90
4483 5008 8.920665 CAGCATCTTAGCTAGTGATTACATTAC 58.079 37.037 8.14 0.00 44.54 1.89
4484 5009 8.642432 AGCATCTTAGCTAGTGATTACATTACA 58.358 33.333 8.14 0.00 44.50 2.41
4485 5010 9.429359 GCATCTTAGCTAGTGATTACATTACAT 57.571 33.333 8.14 0.00 0.00 2.29
4503 5028 7.337689 ACATTACATGTGTATGCAACTGAGATT 59.662 33.333 9.11 0.00 43.01 2.40
4592 5117 7.454260 AACAAAGAATTTCTACTGATCCACC 57.546 36.000 12.87 0.00 35.03 4.61
4604 5131 1.414919 TGATCCACCGCCATAACCTAC 59.585 52.381 0.00 0.00 0.00 3.18
4614 5141 2.802057 GCCATAACCTACGCTACCAGTG 60.802 54.545 0.00 0.00 0.00 3.66
4616 5143 3.131577 CCATAACCTACGCTACCAGTGAA 59.868 47.826 0.00 0.00 0.00 3.18
4618 5145 2.738013 ACCTACGCTACCAGTGAAAC 57.262 50.000 0.00 0.00 0.00 2.78
4624 5151 4.911514 ACGCTACCAGTGAAACATTTTT 57.088 36.364 0.00 0.00 41.43 1.94
4683 5213 0.804544 TCCCTAAAAGTCATCGCGCG 60.805 55.000 26.76 26.76 0.00 6.86
4701 5231 0.514691 CGAGAGTTTGTTGAGCAGGC 59.485 55.000 0.00 0.00 0.00 4.85
4996 5541 2.126307 TCTCGTCTTCTGCTGCGC 60.126 61.111 0.00 0.00 0.00 6.09
4997 5542 3.540014 CTCGTCTTCTGCTGCGCG 61.540 66.667 0.00 0.00 0.00 6.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.438291 CGAAGTAAATATAAGACTGCCAAAATG 57.562 33.333 0.00 0.00 0.00 2.32
2 3 8.129211 GCGAAGTAAATATAAGACTGCCAAAAT 58.871 33.333 0.00 0.00 0.00 1.82
3 4 7.469260 GCGAAGTAAATATAAGACTGCCAAAA 58.531 34.615 0.00 0.00 0.00 2.44
4 5 6.237996 CGCGAAGTAAATATAAGACTGCCAAA 60.238 38.462 0.00 0.00 0.00 3.28
5 6 5.233476 CGCGAAGTAAATATAAGACTGCCAA 59.767 40.000 0.00 0.00 0.00 4.52
6 7 4.743151 CGCGAAGTAAATATAAGACTGCCA 59.257 41.667 0.00 0.00 0.00 4.92
7 8 4.743644 ACGCGAAGTAAATATAAGACTGCC 59.256 41.667 15.93 0.00 0.00 4.85
8 9 5.107951 GGACGCGAAGTAAATATAAGACTGC 60.108 44.000 15.93 0.00 0.00 4.40
9 10 5.115171 CGGACGCGAAGTAAATATAAGACTG 59.885 44.000 15.93 0.00 0.00 3.51
10 11 5.210715 CGGACGCGAAGTAAATATAAGACT 58.789 41.667 15.93 0.00 0.00 3.24
11 12 4.380974 CCGGACGCGAAGTAAATATAAGAC 59.619 45.833 15.93 0.00 0.00 3.01
12 13 4.539870 CCGGACGCGAAGTAAATATAAGA 58.460 43.478 15.93 0.00 0.00 2.10
13 14 3.120782 GCCGGACGCGAAGTAAATATAAG 59.879 47.826 15.93 0.00 0.00 1.73
14 15 3.052036 GCCGGACGCGAAGTAAATATAA 58.948 45.455 15.93 0.00 0.00 0.98
15 16 2.294233 AGCCGGACGCGAAGTAAATATA 59.706 45.455 15.93 0.00 44.76 0.86
16 17 1.068127 AGCCGGACGCGAAGTAAATAT 59.932 47.619 15.93 0.00 44.76 1.28
17 18 0.457035 AGCCGGACGCGAAGTAAATA 59.543 50.000 15.93 0.00 44.76 1.40
18 19 0.804933 GAGCCGGACGCGAAGTAAAT 60.805 55.000 15.93 0.00 44.76 1.40
19 20 1.444895 GAGCCGGACGCGAAGTAAA 60.445 57.895 15.93 0.00 44.76 2.01
20 21 2.180017 GAGCCGGACGCGAAGTAA 59.820 61.111 15.93 0.00 44.76 2.24
21 22 3.818787 GGAGCCGGACGCGAAGTA 61.819 66.667 15.93 0.00 44.76 2.24
23 24 4.856607 GAGGAGCCGGACGCGAAG 62.857 72.222 15.93 2.74 44.76 3.79
33 34 4.851214 AGGGAGCGGAGAGGAGCC 62.851 72.222 0.00 0.00 0.00 4.70
34 35 3.223589 GAGGGAGCGGAGAGGAGC 61.224 72.222 0.00 0.00 0.00 4.70
35 36 2.520741 GGAGGGAGCGGAGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
36 37 3.347590 TGGAGGGAGCGGAGAGGA 61.348 66.667 0.00 0.00 0.00 3.71
37 38 3.151022 GTGGAGGGAGCGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
38 39 2.043450 AGTGGAGGGAGCGGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
39 40 2.043852 GAGTGGAGGGAGCGGAGA 60.044 66.667 0.00 0.00 0.00 3.71
40 41 3.151022 GGAGTGGAGGGAGCGGAG 61.151 72.222 0.00 0.00 0.00 4.63
44 45 3.462678 GACCGGAGTGGAGGGAGC 61.463 72.222 9.46 0.00 42.00 4.70
45 46 2.760385 GGACCGGAGTGGAGGGAG 60.760 72.222 9.46 0.00 42.00 4.30
46 47 4.753662 CGGACCGGAGTGGAGGGA 62.754 72.222 9.46 0.00 42.00 4.20
65 66 3.151022 GCTAGAGCCTGGTCCGCT 61.151 66.667 0.00 0.00 39.95 5.52
66 67 3.145422 GAGCTAGAGCCTGGTCCGC 62.145 68.421 0.00 0.00 43.38 5.54
67 68 1.112315 ATGAGCTAGAGCCTGGTCCG 61.112 60.000 0.00 0.00 43.38 4.79
68 69 1.127343 AATGAGCTAGAGCCTGGTCC 58.873 55.000 0.00 0.00 43.38 4.46
69 70 2.998316 AAATGAGCTAGAGCCTGGTC 57.002 50.000 0.00 0.00 43.38 4.02
70 71 2.573462 TGAAAATGAGCTAGAGCCTGGT 59.427 45.455 0.00 0.00 43.38 4.00
71 72 2.941720 GTGAAAATGAGCTAGAGCCTGG 59.058 50.000 0.00 0.00 43.38 4.45
72 73 3.603532 TGTGAAAATGAGCTAGAGCCTG 58.396 45.455 0.00 0.00 43.38 4.85
73 74 3.517100 TCTGTGAAAATGAGCTAGAGCCT 59.483 43.478 0.00 0.00 43.38 4.58
74 75 3.620821 GTCTGTGAAAATGAGCTAGAGCC 59.379 47.826 0.00 0.00 43.38 4.70
75 76 3.305629 CGTCTGTGAAAATGAGCTAGAGC 59.694 47.826 0.00 0.00 42.49 4.09
76 77 4.489810 ACGTCTGTGAAAATGAGCTAGAG 58.510 43.478 0.00 0.00 0.00 2.43
77 78 4.521130 ACGTCTGTGAAAATGAGCTAGA 57.479 40.909 0.00 0.00 0.00 2.43
78 79 5.597813 AAACGTCTGTGAAAATGAGCTAG 57.402 39.130 0.00 0.00 0.00 3.42
79 80 5.277779 CCAAAACGTCTGTGAAAATGAGCTA 60.278 40.000 0.00 0.00 0.00 3.32
80 81 4.498009 CCAAAACGTCTGTGAAAATGAGCT 60.498 41.667 0.00 0.00 0.00 4.09
81 82 3.730715 CCAAAACGTCTGTGAAAATGAGC 59.269 43.478 0.00 0.00 0.00 4.26
82 83 3.730715 GCCAAAACGTCTGTGAAAATGAG 59.269 43.478 0.00 0.00 0.00 2.90
83 84 3.129462 TGCCAAAACGTCTGTGAAAATGA 59.871 39.130 0.00 0.00 0.00 2.57
84 85 3.443037 TGCCAAAACGTCTGTGAAAATG 58.557 40.909 0.00 0.00 0.00 2.32
85 86 3.130340 ACTGCCAAAACGTCTGTGAAAAT 59.870 39.130 0.00 0.00 0.00 1.82
86 87 2.490115 ACTGCCAAAACGTCTGTGAAAA 59.510 40.909 0.00 0.00 0.00 2.29
87 88 2.088423 ACTGCCAAAACGTCTGTGAAA 58.912 42.857 0.00 0.00 0.00 2.69
88 89 1.400142 CACTGCCAAAACGTCTGTGAA 59.600 47.619 5.60 0.00 33.37 3.18
89 90 1.013596 CACTGCCAAAACGTCTGTGA 58.986 50.000 5.60 0.00 33.37 3.58
90 91 1.003545 CTCACTGCCAAAACGTCTGTG 60.004 52.381 0.00 0.00 0.00 3.66
91 92 1.299541 CTCACTGCCAAAACGTCTGT 58.700 50.000 0.00 0.00 0.00 3.41
92 93 0.040958 GCTCACTGCCAAAACGTCTG 60.041 55.000 0.00 0.00 35.15 3.51
93 94 0.179045 AGCTCACTGCCAAAACGTCT 60.179 50.000 0.00 0.00 44.23 4.18
94 95 0.235926 GAGCTCACTGCCAAAACGTC 59.764 55.000 9.40 0.00 44.23 4.34
95 96 1.166531 GGAGCTCACTGCCAAAACGT 61.167 55.000 17.19 0.00 44.23 3.99
96 97 1.165907 TGGAGCTCACTGCCAAAACG 61.166 55.000 17.19 0.00 44.23 3.60
97 98 0.312102 GTGGAGCTCACTGCCAAAAC 59.688 55.000 17.19 0.00 44.23 2.43
98 99 0.106769 TGTGGAGCTCACTGCCAAAA 60.107 50.000 17.19 0.00 46.20 2.44
99 100 0.106769 TTGTGGAGCTCACTGCCAAA 60.107 50.000 17.19 0.00 46.20 3.28
100 101 0.819259 GTTGTGGAGCTCACTGCCAA 60.819 55.000 17.19 7.29 46.20 4.52
101 102 1.227943 GTTGTGGAGCTCACTGCCA 60.228 57.895 17.19 0.66 46.20 4.92
102 103 0.952984 GAGTTGTGGAGCTCACTGCC 60.953 60.000 17.19 0.00 46.20 4.85
103 104 0.952984 GGAGTTGTGGAGCTCACTGC 60.953 60.000 17.19 11.67 46.20 4.40
104 105 0.668706 CGGAGTTGTGGAGCTCACTG 60.669 60.000 17.19 0.00 46.20 3.66
105 106 1.115930 ACGGAGTTGTGGAGCTCACT 61.116 55.000 17.19 10.24 46.20 3.41
106 107 0.946221 CACGGAGTTGTGGAGCTCAC 60.946 60.000 17.19 12.22 41.61 3.51
107 108 1.367471 CACGGAGTTGTGGAGCTCA 59.633 57.895 17.19 0.00 41.61 4.26
108 109 4.268687 CACGGAGTTGTGGAGCTC 57.731 61.111 4.71 4.71 41.61 4.09
119 120 0.962855 TCTGCTCTGACTCCACGGAG 60.963 60.000 11.67 11.67 46.91 4.63
120 121 0.962855 CTCTGCTCTGACTCCACGGA 60.963 60.000 0.00 0.00 0.00 4.69
121 122 0.962855 TCTCTGCTCTGACTCCACGG 60.963 60.000 0.00 0.00 0.00 4.94
122 123 1.102154 ATCTCTGCTCTGACTCCACG 58.898 55.000 0.00 0.00 0.00 4.94
123 124 2.098614 TCATCTCTGCTCTGACTCCAC 58.901 52.381 0.00 0.00 0.00 4.02
124 125 2.377073 CTCATCTCTGCTCTGACTCCA 58.623 52.381 0.00 0.00 0.00 3.86
125 126 1.682854 CCTCATCTCTGCTCTGACTCC 59.317 57.143 0.00 0.00 0.00 3.85
126 127 1.682854 CCCTCATCTCTGCTCTGACTC 59.317 57.143 0.00 0.00 0.00 3.36
127 128 1.287442 TCCCTCATCTCTGCTCTGACT 59.713 52.381 0.00 0.00 0.00 3.41
128 129 1.774110 TCCCTCATCTCTGCTCTGAC 58.226 55.000 0.00 0.00 0.00 3.51
129 130 2.771562 ATCCCTCATCTCTGCTCTGA 57.228 50.000 0.00 0.00 0.00 3.27
130 131 2.037511 GGAATCCCTCATCTCTGCTCTG 59.962 54.545 0.00 0.00 0.00 3.35
131 132 2.328319 GGAATCCCTCATCTCTGCTCT 58.672 52.381 0.00 0.00 0.00 4.09
132 133 1.000731 CGGAATCCCTCATCTCTGCTC 59.999 57.143 0.00 0.00 0.00 4.26
133 134 1.047002 CGGAATCCCTCATCTCTGCT 58.953 55.000 0.00 0.00 0.00 4.24
134 135 1.043816 TCGGAATCCCTCATCTCTGC 58.956 55.000 0.00 0.00 0.00 4.26
135 136 2.432146 TGTTCGGAATCCCTCATCTCTG 59.568 50.000 0.00 0.00 0.00 3.35
136 137 2.752030 TGTTCGGAATCCCTCATCTCT 58.248 47.619 0.00 0.00 0.00 3.10
137 138 3.462021 CTTGTTCGGAATCCCTCATCTC 58.538 50.000 0.00 0.00 0.00 2.75
138 139 2.171448 CCTTGTTCGGAATCCCTCATCT 59.829 50.000 0.00 0.00 0.00 2.90
139 140 2.565841 CCTTGTTCGGAATCCCTCATC 58.434 52.381 0.00 0.00 0.00 2.92
140 141 1.408822 GCCTTGTTCGGAATCCCTCAT 60.409 52.381 0.00 0.00 0.00 2.90
141 142 0.035439 GCCTTGTTCGGAATCCCTCA 60.035 55.000 0.00 0.00 0.00 3.86
142 143 0.748367 GGCCTTGTTCGGAATCCCTC 60.748 60.000 0.00 0.00 0.00 4.30
143 144 1.208165 AGGCCTTGTTCGGAATCCCT 61.208 55.000 0.00 0.00 0.00 4.20
144 145 0.323451 AAGGCCTTGTTCGGAATCCC 60.323 55.000 19.73 0.00 0.00 3.85
145 146 2.289565 CTAAGGCCTTGTTCGGAATCC 58.710 52.381 28.77 0.00 0.00 3.01
146 147 2.093128 TCCTAAGGCCTTGTTCGGAATC 60.093 50.000 28.77 0.00 0.00 2.52
147 148 1.913419 TCCTAAGGCCTTGTTCGGAAT 59.087 47.619 28.77 0.00 0.00 3.01
148 149 1.354101 TCCTAAGGCCTTGTTCGGAA 58.646 50.000 28.77 4.85 0.00 4.30
149 150 1.354101 TTCCTAAGGCCTTGTTCGGA 58.646 50.000 28.77 22.43 0.00 4.55
150 151 2.420058 ATTCCTAAGGCCTTGTTCGG 57.580 50.000 28.77 20.65 0.00 4.30
151 152 4.372656 CTCTATTCCTAAGGCCTTGTTCG 58.627 47.826 28.77 12.86 0.00 3.95
152 153 4.164413 ACCTCTATTCCTAAGGCCTTGTTC 59.836 45.833 28.77 0.00 33.21 3.18
153 154 4.080299 CACCTCTATTCCTAAGGCCTTGTT 60.080 45.833 28.77 4.09 33.21 2.83
154 155 3.456277 CACCTCTATTCCTAAGGCCTTGT 59.544 47.826 28.77 10.08 33.21 3.16
155 156 3.181450 CCACCTCTATTCCTAAGGCCTTG 60.181 52.174 28.77 16.94 33.21 3.61
156 157 3.049344 CCACCTCTATTCCTAAGGCCTT 58.951 50.000 24.18 24.18 33.21 4.35
157 158 2.021936 ACCACCTCTATTCCTAAGGCCT 60.022 50.000 0.00 0.00 33.21 5.19
158 159 2.409570 ACCACCTCTATTCCTAAGGCC 58.590 52.381 0.00 0.00 33.21 5.19
159 160 4.224762 ACTACCACCTCTATTCCTAAGGC 58.775 47.826 0.00 0.00 33.21 4.35
160 161 6.612741 AGTACTACCACCTCTATTCCTAAGG 58.387 44.000 0.00 0.00 36.21 2.69
170 171 7.830201 GCACTGATATATAGTACTACCACCTCT 59.170 40.741 4.31 0.00 0.00 3.69
171 172 7.067251 GGCACTGATATATAGTACTACCACCTC 59.933 44.444 4.31 0.16 0.00 3.85
172 173 6.890814 GGCACTGATATATAGTACTACCACCT 59.109 42.308 4.31 0.00 0.00 4.00
173 174 6.662234 TGGCACTGATATATAGTACTACCACC 59.338 42.308 4.31 0.00 0.00 4.61
174 175 7.698506 TGGCACTGATATATAGTACTACCAC 57.301 40.000 4.31 0.00 0.00 4.16
175 176 8.895141 ATTGGCACTGATATATAGTACTACCA 57.105 34.615 4.31 1.16 0.00 3.25
181 182 9.725019 CCAGAAAATTGGCACTGATATATAGTA 57.275 33.333 3.82 0.00 32.90 1.82
182 183 8.220559 ACCAGAAAATTGGCACTGATATATAGT 58.779 33.333 3.82 0.00 42.18 2.12
183 184 8.509690 CACCAGAAAATTGGCACTGATATATAG 58.490 37.037 3.82 0.00 42.18 1.31
231 232 9.347240 CTCCATTTCTAAATAACATCTGTGGAT 57.653 33.333 0.00 0.00 0.00 3.41
232 233 7.775093 CCTCCATTTCTAAATAACATCTGTGGA 59.225 37.037 0.00 0.00 0.00 4.02
233 234 7.557719 ACCTCCATTTCTAAATAACATCTGTGG 59.442 37.037 0.00 0.00 0.00 4.17
234 235 8.511604 ACCTCCATTTCTAAATAACATCTGTG 57.488 34.615 0.00 0.00 0.00 3.66
235 236 9.838339 CTACCTCCATTTCTAAATAACATCTGT 57.162 33.333 0.00 0.00 0.00 3.41
236 237 9.838339 ACTACCTCCATTTCTAAATAACATCTG 57.162 33.333 0.00 0.00 0.00 2.90
251 252 9.742144 CTGATACATAGTACTACTACCTCCATT 57.258 37.037 4.31 0.00 32.84 3.16
252 253 8.892530 ACTGATACATAGTACTACTACCTCCAT 58.107 37.037 4.31 0.00 32.84 3.41
253 254 8.155510 CACTGATACATAGTACTACTACCTCCA 58.844 40.741 4.31 0.00 32.84 3.86
254 255 7.119553 GCACTGATACATAGTACTACTACCTCC 59.880 44.444 4.31 0.00 32.84 4.30
255 256 7.119553 GGCACTGATACATAGTACTACTACCTC 59.880 44.444 4.31 0.16 32.84 3.85
256 257 6.941436 GGCACTGATACATAGTACTACTACCT 59.059 42.308 4.31 0.00 32.84 3.08
257 258 6.713903 TGGCACTGATACATAGTACTACTACC 59.286 42.308 4.31 0.00 32.84 3.18
258 259 7.741027 TGGCACTGATACATAGTACTACTAC 57.259 40.000 4.31 0.00 32.84 2.73
259 260 7.997223 AGTTGGCACTGATACATAGTACTACTA 59.003 37.037 4.31 0.00 34.82 1.82
260 261 6.834451 AGTTGGCACTGATACATAGTACTACT 59.166 38.462 4.31 0.00 0.00 2.57
261 262 7.040473 AGTTGGCACTGATACATAGTACTAC 57.960 40.000 4.31 0.00 0.00 2.73
262 263 7.655521 AAGTTGGCACTGATACATAGTACTA 57.344 36.000 4.77 4.77 31.60 1.82
263 264 6.546428 AAGTTGGCACTGATACATAGTACT 57.454 37.500 0.00 0.00 31.60 2.73
264 265 7.010552 CAGAAAGTTGGCACTGATACATAGTAC 59.989 40.741 0.00 0.00 31.60 2.73
265 266 7.041721 CAGAAAGTTGGCACTGATACATAGTA 58.958 38.462 0.00 0.00 31.60 1.82
266 267 5.877012 CAGAAAGTTGGCACTGATACATAGT 59.123 40.000 0.00 0.00 31.60 2.12
267 268 5.295292 CCAGAAAGTTGGCACTGATACATAG 59.705 44.000 3.82 0.00 31.60 2.23
268 269 5.185454 CCAGAAAGTTGGCACTGATACATA 58.815 41.667 3.82 0.00 31.60 2.29
269 270 4.012374 CCAGAAAGTTGGCACTGATACAT 58.988 43.478 3.82 0.00 31.60 2.29
270 271 3.181445 ACCAGAAAGTTGGCACTGATACA 60.181 43.478 3.82 0.00 42.18 2.29
271 272 3.189287 CACCAGAAAGTTGGCACTGATAC 59.811 47.826 3.82 0.00 42.18 2.24
272 273 3.411446 CACCAGAAAGTTGGCACTGATA 58.589 45.455 3.82 0.00 42.18 2.15
273 274 2.233271 CACCAGAAAGTTGGCACTGAT 58.767 47.619 3.82 0.00 42.18 2.90
274 275 1.679139 CACCAGAAAGTTGGCACTGA 58.321 50.000 3.82 0.00 42.18 3.41
275 276 0.031178 GCACCAGAAAGTTGGCACTG 59.969 55.000 0.00 0.00 42.18 3.66
276 277 1.109323 GGCACCAGAAAGTTGGCACT 61.109 55.000 0.00 0.00 42.18 4.40
277 278 1.363807 GGCACCAGAAAGTTGGCAC 59.636 57.895 0.00 0.00 42.18 5.01
278 279 0.469705 ATGGCACCAGAAAGTTGGCA 60.470 50.000 0.00 0.00 42.18 4.92
279 280 0.681175 AATGGCACCAGAAAGTTGGC 59.319 50.000 0.00 0.00 42.18 4.52
280 281 2.629617 AGAAATGGCACCAGAAAGTTGG 59.370 45.455 0.00 0.00 44.09 3.77
281 282 5.452078 TTAGAAATGGCACCAGAAAGTTG 57.548 39.130 0.00 0.00 0.00 3.16
282 283 6.267471 TCATTTAGAAATGGCACCAGAAAGTT 59.733 34.615 13.60 0.00 44.51 2.66
283 284 5.774690 TCATTTAGAAATGGCACCAGAAAGT 59.225 36.000 13.60 0.00 44.51 2.66
284 285 6.271488 TCATTTAGAAATGGCACCAGAAAG 57.729 37.500 13.60 0.00 44.51 2.62
285 286 6.662865 TTCATTTAGAAATGGCACCAGAAA 57.337 33.333 13.60 0.00 44.51 2.52
286 287 6.662865 TTTCATTTAGAAATGGCACCAGAA 57.337 33.333 13.60 0.00 44.51 3.02
287 288 6.662865 TTTTCATTTAGAAATGGCACCAGA 57.337 33.333 13.60 0.00 45.15 3.86
288 289 7.910441 ATTTTTCATTTAGAAATGGCACCAG 57.090 32.000 13.60 0.00 45.15 4.00
289 290 7.308469 GCAATTTTTCATTTAGAAATGGCACCA 60.308 33.333 13.60 0.00 45.15 4.17
290 291 7.022979 GCAATTTTTCATTTAGAAATGGCACC 58.977 34.615 13.60 0.00 45.15 5.01
291 292 7.583230 TGCAATTTTTCATTTAGAAATGGCAC 58.417 30.769 13.60 0.00 45.15 5.01
292 293 7.741027 TGCAATTTTTCATTTAGAAATGGCA 57.259 28.000 13.60 10.54 45.15 4.92
293 294 7.911727 GGATGCAATTTTTCATTTAGAAATGGC 59.088 33.333 13.60 8.51 45.15 4.40
294 295 8.948145 TGGATGCAATTTTTCATTTAGAAATGG 58.052 29.630 13.60 0.00 45.15 3.16
295 296 9.763465 GTGGATGCAATTTTTCATTTAGAAATG 57.237 29.630 8.42 8.42 45.15 2.32
296 297 9.504708 TGTGGATGCAATTTTTCATTTAGAAAT 57.495 25.926 0.00 0.00 45.15 2.17
297 298 8.899427 TGTGGATGCAATTTTTCATTTAGAAA 57.101 26.923 0.00 0.00 44.21 2.52
298 299 9.153721 GATGTGGATGCAATTTTTCATTTAGAA 57.846 29.630 0.00 0.00 0.00 2.10
299 300 7.488792 CGATGTGGATGCAATTTTTCATTTAGA 59.511 33.333 0.00 0.00 0.00 2.10
300 301 7.488792 TCGATGTGGATGCAATTTTTCATTTAG 59.511 33.333 0.00 0.00 0.00 1.85
301 302 7.318893 TCGATGTGGATGCAATTTTTCATTTA 58.681 30.769 0.00 0.00 0.00 1.40
302 303 6.164876 TCGATGTGGATGCAATTTTTCATTT 58.835 32.000 0.00 0.00 0.00 2.32
303 304 5.722263 TCGATGTGGATGCAATTTTTCATT 58.278 33.333 0.00 0.00 0.00 2.57
304 305 5.327616 TCGATGTGGATGCAATTTTTCAT 57.672 34.783 0.00 0.00 0.00 2.57
305 306 4.780275 TCGATGTGGATGCAATTTTTCA 57.220 36.364 0.00 0.00 0.00 2.69
306 307 4.505191 CCATCGATGTGGATGCAATTTTTC 59.495 41.667 23.27 0.00 41.95 2.29
307 308 4.081531 ACCATCGATGTGGATGCAATTTTT 60.082 37.500 23.27 0.00 41.95 1.94
308 309 3.448301 ACCATCGATGTGGATGCAATTTT 59.552 39.130 23.27 0.00 41.95 1.82
309 310 3.025978 ACCATCGATGTGGATGCAATTT 58.974 40.909 23.27 0.00 41.95 1.82
310 311 2.620115 GACCATCGATGTGGATGCAATT 59.380 45.455 23.27 0.00 41.95 2.32
311 312 2.158711 AGACCATCGATGTGGATGCAAT 60.159 45.455 23.27 0.00 41.95 3.56
312 313 1.210234 AGACCATCGATGTGGATGCAA 59.790 47.619 23.27 0.00 41.95 4.08
313 314 0.832626 AGACCATCGATGTGGATGCA 59.167 50.000 23.27 0.00 41.95 3.96
314 315 1.869767 GAAGACCATCGATGTGGATGC 59.130 52.381 23.27 6.88 41.95 3.91
315 316 2.130395 CGAAGACCATCGATGTGGATG 58.870 52.381 23.27 10.49 45.48 3.51
316 317 1.069204 CCGAAGACCATCGATGTGGAT 59.931 52.381 23.27 7.60 45.48 3.41
317 318 0.459899 CCGAAGACCATCGATGTGGA 59.540 55.000 23.27 0.00 45.48 4.02
318 319 0.530650 CCCGAAGACCATCGATGTGG 60.531 60.000 23.27 13.87 45.48 4.17
319 320 1.154205 GCCCGAAGACCATCGATGTG 61.154 60.000 23.27 16.61 45.48 3.21
320 321 1.144057 GCCCGAAGACCATCGATGT 59.856 57.895 23.27 11.88 45.48 3.06
321 322 1.595382 GGCCCGAAGACCATCGATG 60.595 63.158 18.76 18.76 45.48 3.84
322 323 1.410850 ATGGCCCGAAGACCATCGAT 61.411 55.000 0.00 0.00 45.48 3.59
323 324 2.063979 ATGGCCCGAAGACCATCGA 61.064 57.895 0.00 0.00 45.48 3.59
324 325 1.889105 CATGGCCCGAAGACCATCG 60.889 63.158 0.00 0.00 41.25 3.84
325 326 1.526917 CCATGGCCCGAAGACCATC 60.527 63.158 0.00 0.00 41.25 3.51
326 327 1.987807 CTCCATGGCCCGAAGACCAT 61.988 60.000 6.96 0.00 43.38 3.55
327 328 2.609299 TCCATGGCCCGAAGACCA 60.609 61.111 6.96 0.00 37.90 4.02
328 329 2.190578 CTCCATGGCCCGAAGACC 59.809 66.667 6.96 0.00 0.00 3.85
329 330 2.190578 CCTCCATGGCCCGAAGAC 59.809 66.667 6.96 0.00 0.00 3.01
330 331 2.285368 ACCTCCATGGCCCGAAGA 60.285 61.111 6.96 0.00 40.22 2.87
331 332 2.124570 CACCTCCATGGCCCGAAG 60.125 66.667 6.96 0.00 40.22 3.79
332 333 2.609299 TCACCTCCATGGCCCGAA 60.609 61.111 6.96 0.00 40.22 4.30
333 334 3.083349 CTCACCTCCATGGCCCGA 61.083 66.667 6.96 0.00 40.22 5.14
334 335 4.181010 CCTCACCTCCATGGCCCG 62.181 72.222 6.96 0.00 40.22 6.13
335 336 2.692368 TCCTCACCTCCATGGCCC 60.692 66.667 6.96 0.00 40.22 5.80
391 393 9.612066 AACCAACACAATGAATCTAACAAAAAT 57.388 25.926 0.00 0.00 0.00 1.82
394 396 6.983307 CCAACCAACACAATGAATCTAACAAA 59.017 34.615 0.00 0.00 0.00 2.83
403 405 1.411977 CAGCCCAACCAACACAATGAA 59.588 47.619 0.00 0.00 0.00 2.57
407 409 0.613292 ACACAGCCCAACCAACACAA 60.613 50.000 0.00 0.00 0.00 3.33
408 410 1.000270 ACACAGCCCAACCAACACA 60.000 52.632 0.00 0.00 0.00 3.72
409 411 1.034838 TCACACAGCCCAACCAACAC 61.035 55.000 0.00 0.00 0.00 3.32
411 413 1.733526 GTCACACAGCCCAACCAAC 59.266 57.895 0.00 0.00 0.00 3.77
437 440 2.877043 TTATTTCTACCGAGGGACGC 57.123 50.000 0.00 0.00 41.07 5.19
438 441 4.037684 AGACATTATTTCTACCGAGGGACG 59.962 45.833 0.00 0.00 42.18 4.79
443 446 5.910166 CGTGAGAGACATTATTTCTACCGAG 59.090 44.000 0.00 0.00 0.00 4.63
445 448 5.579718 ACGTGAGAGACATTATTTCTACCG 58.420 41.667 0.00 0.00 0.00 4.02
446 449 7.829378 AAACGTGAGAGACATTATTTCTACC 57.171 36.000 0.00 0.00 0.00 3.18
451 454 8.674607 GGGAATAAAACGTGAGAGACATTATTT 58.325 33.333 0.00 0.00 0.00 1.40
463 466 2.037511 ACTGGACGGGAATAAAACGTGA 59.962 45.455 0.00 0.00 41.40 4.35
466 469 2.160813 CCAACTGGACGGGAATAAAACG 59.839 50.000 0.00 0.00 37.39 3.60
470 473 1.612199 GCACCAACTGGACGGGAATAA 60.612 52.381 1.86 0.00 38.94 1.40
474 477 4.308458 CGCACCAACTGGACGGGA 62.308 66.667 1.86 0.00 38.94 5.14
479 482 1.185618 AGCTAGACGCACCAACTGGA 61.186 55.000 1.86 0.00 42.61 3.86
480 483 0.320771 AAGCTAGACGCACCAACTGG 60.321 55.000 0.00 0.00 42.61 4.00
482 485 1.202651 ACAAAGCTAGACGCACCAACT 60.203 47.619 0.00 0.00 42.61 3.16
484 487 1.508632 GACAAAGCTAGACGCACCAA 58.491 50.000 0.00 0.00 42.61 3.67
498 501 0.321564 CCCACATGCTCTCCGACAAA 60.322 55.000 0.00 0.00 0.00 2.83
500 503 0.977627 ATCCCACATGCTCTCCGACA 60.978 55.000 0.00 0.00 0.00 4.35
509 538 0.734889 CCTGAACGAATCCCACATGC 59.265 55.000 0.00 0.00 0.00 4.06
511 540 0.394352 GCCCTGAACGAATCCCACAT 60.394 55.000 0.00 0.00 0.00 3.21
514 543 1.299648 CAGCCCTGAACGAATCCCA 59.700 57.895 0.00 0.00 0.00 4.37
521 550 1.237285 CCAAAGACCAGCCCTGAACG 61.237 60.000 0.00 0.00 0.00 3.95
523 552 0.178992 CACCAAAGACCAGCCCTGAA 60.179 55.000 0.00 0.00 0.00 3.02
526 555 1.774217 TCCACCAAAGACCAGCCCT 60.774 57.895 0.00 0.00 0.00 5.19
528 557 4.081050 GTCCACCAAAGACCAGCC 57.919 61.111 0.00 0.00 0.00 4.85
538 567 1.075374 CAGATCCAAAAGGGTCCACCA 59.925 52.381 0.00 0.00 43.89 4.17
545 574 2.290323 ACGAAGACCAGATCCAAAAGGG 60.290 50.000 0.00 0.00 38.37 3.95
547 576 3.123621 CGAACGAAGACCAGATCCAAAAG 59.876 47.826 0.00 0.00 0.00 2.27
548 577 3.064207 CGAACGAAGACCAGATCCAAAA 58.936 45.455 0.00 0.00 0.00 2.44
557 586 3.447918 AAGAAAGACGAACGAAGACCA 57.552 42.857 0.14 0.00 0.00 4.02
563 592 2.607631 ACCCAAAGAAAGACGAACGA 57.392 45.000 0.14 0.00 0.00 3.85
574 603 5.303333 GGATCAAACCTGTAAAACCCAAAGA 59.697 40.000 0.00 0.00 0.00 2.52
575 604 5.304357 AGGATCAAACCTGTAAAACCCAAAG 59.696 40.000 0.00 0.00 39.01 2.77
579 608 5.048013 CAGAAGGATCAAACCTGTAAAACCC 60.048 44.000 0.00 0.00 40.49 4.11
615 645 2.033407 CAGCAACTATCGCCGATGAAAG 60.033 50.000 10.41 1.50 0.00 2.62
616 646 1.933181 CAGCAACTATCGCCGATGAAA 59.067 47.619 10.41 0.00 0.00 2.69
629 659 3.349006 CGCACCGAAGCAGCAACT 61.349 61.111 0.00 0.00 0.00 3.16
636 666 2.775032 TAGGACCAACGCACCGAAGC 62.775 60.000 0.00 0.00 0.00 3.86
639 669 1.216977 CATAGGACCAACGCACCGA 59.783 57.895 0.00 0.00 0.00 4.69
640 670 1.813753 CCATAGGACCAACGCACCG 60.814 63.158 0.00 0.00 0.00 4.94
647 677 2.124411 GCTAAGACCCCATAGGACCAA 58.876 52.381 0.00 0.00 39.89 3.67
655 685 0.968901 TCGTCGTGCTAAGACCCCAT 60.969 55.000 0.00 0.00 35.33 4.00
699 729 1.459592 CTCGTCGAAGCCGAACAAATT 59.540 47.619 0.00 0.00 37.54 1.82
700 730 1.068474 CTCGTCGAAGCCGAACAAAT 58.932 50.000 0.00 0.00 37.54 2.32
703 733 2.257371 CCTCGTCGAAGCCGAACA 59.743 61.111 0.00 0.00 37.54 3.18
706 736 2.439701 ATCCCTCGTCGAAGCCGA 60.440 61.111 0.00 0.00 43.35 5.54
709 739 2.107141 CCCATCCCTCGTCGAAGC 59.893 66.667 0.00 0.00 0.00 3.86
712 742 1.076265 ATCACCCATCCCTCGTCGA 60.076 57.895 0.00 0.00 0.00 4.20
715 745 1.676678 CGTCATCACCCATCCCTCGT 61.677 60.000 0.00 0.00 0.00 4.18
716 746 1.068083 CGTCATCACCCATCCCTCG 59.932 63.158 0.00 0.00 0.00 4.63
723 753 4.386951 CACCGCCGTCATCACCCA 62.387 66.667 0.00 0.00 0.00 4.51
727 757 3.529341 AAGTGCACCGCCGTCATCA 62.529 57.895 14.63 0.00 0.00 3.07
739 769 0.034756 TGGAGCGAGCTAAAAGTGCA 59.965 50.000 0.00 0.00 0.00 4.57
742 772 1.941668 GCACTGGAGCGAGCTAAAAGT 60.942 52.381 0.00 0.00 0.00 2.66
744 774 0.321671 AGCACTGGAGCGAGCTAAAA 59.678 50.000 0.00 0.00 40.15 1.52
747 777 0.967887 AGAAGCACTGGAGCGAGCTA 60.968 55.000 0.00 0.00 40.15 3.32
748 778 1.825281 AAGAAGCACTGGAGCGAGCT 61.825 55.000 0.00 0.00 40.15 4.09
765 795 3.450578 AGCGACGACTAGAGTCTAGAAG 58.549 50.000 29.87 23.28 42.66 2.85
766 796 3.523606 AGCGACGACTAGAGTCTAGAA 57.476 47.619 29.87 0.00 42.66 2.10
767 797 3.004629 CCTAGCGACGACTAGAGTCTAGA 59.995 52.174 29.87 7.36 41.92 2.43
768 798 3.243501 ACCTAGCGACGACTAGAGTCTAG 60.244 52.174 23.12 23.12 41.92 2.43
769 799 2.692557 ACCTAGCGACGACTAGAGTCTA 59.307 50.000 20.67 0.00 41.92 2.59
770 800 1.481772 ACCTAGCGACGACTAGAGTCT 59.518 52.381 20.67 0.00 41.92 3.24
771 801 1.593933 CACCTAGCGACGACTAGAGTC 59.406 57.143 20.67 4.89 41.92 3.36
772 802 1.654317 CACCTAGCGACGACTAGAGT 58.346 55.000 20.67 15.46 41.92 3.24
773 803 0.938713 CCACCTAGCGACGACTAGAG 59.061 60.000 20.67 15.03 41.92 2.43
774 804 0.251354 ACCACCTAGCGACGACTAGA 59.749 55.000 20.67 0.00 41.92 2.43
775 805 0.656785 GACCACCTAGCGACGACTAG 59.343 60.000 15.21 15.21 39.54 2.57
784 814 2.893398 CTCCGTGGACCACCTAGC 59.107 66.667 19.11 0.00 37.04 3.42
788 818 1.542187 AACTAGCTCCGTGGACCACC 61.542 60.000 19.11 4.77 0.00 4.61
794 824 3.314541 AAAGTACAACTAGCTCCGTGG 57.685 47.619 0.00 0.00 0.00 4.94
795 825 6.963049 ATAAAAAGTACAACTAGCTCCGTG 57.037 37.500 0.00 0.00 0.00 4.94
804 834 8.863872 AGCCAGACATAATAAAAAGTACAACT 57.136 30.769 0.00 0.00 0.00 3.16
835 865 2.229543 TCAACTTCAATCATGCCAGCAC 59.770 45.455 0.00 0.00 0.00 4.40
836 866 2.516906 TCAACTTCAATCATGCCAGCA 58.483 42.857 0.00 0.00 0.00 4.41
837 867 3.581024 TTCAACTTCAATCATGCCAGC 57.419 42.857 0.00 0.00 0.00 4.85
838 868 6.688637 TCTATTCAACTTCAATCATGCCAG 57.311 37.500 0.00 0.00 0.00 4.85
839 869 7.417003 CCAATCTATTCAACTTCAATCATGCCA 60.417 37.037 0.00 0.00 0.00 4.92
840 870 6.921857 CCAATCTATTCAACTTCAATCATGCC 59.078 38.462 0.00 0.00 0.00 4.40
841 871 7.709947 TCCAATCTATTCAACTTCAATCATGC 58.290 34.615 0.00 0.00 0.00 4.06
876 907 5.914635 CACGAAACTGTGTAGATGCATTTTT 59.085 36.000 0.00 0.00 35.12 1.94
900 931 4.255833 TGGATTTTGCCTCATCAAACAC 57.744 40.909 0.00 0.00 35.86 3.32
958 989 6.285061 TCGATCTTTATTTCGACGATCCACG 61.285 44.000 0.00 0.00 39.29 4.94
1090 1128 3.209812 CCTCATCGTCTCCGCGGA 61.210 66.667 29.03 29.03 0.00 5.54
1111 1150 1.867698 GCTGCTTCTATCTCACTCGGC 60.868 57.143 0.00 0.00 0.00 5.54
1369 1410 1.376942 GTCCTCCTCGTCCTCGTCA 60.377 63.158 0.00 0.00 38.33 4.35
1392 1433 0.606673 GTCCTTGAACAGCCCAGACC 60.607 60.000 0.00 0.00 0.00 3.85
1683 1724 4.394712 GAGGGAGGTGGGCGTGTG 62.395 72.222 0.00 0.00 0.00 3.82
1688 1729 1.696314 TTATGGGAGGGAGGTGGGC 60.696 63.158 0.00 0.00 0.00 5.36
1716 1765 7.224949 TGAACATACGTCTACAGAGATCACTAG 59.775 40.741 0.00 0.00 33.14 2.57
1719 1768 6.120378 TGAACATACGTCTACAGAGATCAC 57.880 41.667 0.00 0.00 33.14 3.06
1721 1770 7.168302 CCAAATGAACATACGTCTACAGAGATC 59.832 40.741 0.00 0.00 33.14 2.75
1722 1771 6.980978 CCAAATGAACATACGTCTACAGAGAT 59.019 38.462 0.00 0.00 33.14 2.75
1723 1772 6.071560 ACCAAATGAACATACGTCTACAGAGA 60.072 38.462 0.00 0.00 0.00 3.10
1728 1777 7.360575 AGAAACCAAATGAACATACGTCTAC 57.639 36.000 0.00 0.00 0.00 2.59
1729 1778 7.118680 GGAAGAAACCAAATGAACATACGTCTA 59.881 37.037 0.00 0.00 0.00 2.59
1730 1779 6.072673 GGAAGAAACCAAATGAACATACGTCT 60.073 38.462 0.00 0.00 0.00 4.18
1731 1780 6.072673 AGGAAGAAACCAAATGAACATACGTC 60.073 38.462 0.00 0.00 0.00 4.34
1734 1783 5.863935 GCAGGAAGAAACCAAATGAACATAC 59.136 40.000 0.00 0.00 0.00 2.39
1744 1793 1.146774 TCATGGGCAGGAAGAAACCAA 59.853 47.619 0.00 0.00 34.45 3.67
1754 1803 0.321564 TCGAACAGTTCATGGGCAGG 60.322 55.000 13.82 0.00 0.00 4.85
1783 1832 7.013178 CGAGTACATCTATGATCCATCAGCTAT 59.987 40.741 0.00 0.00 40.64 2.97
2172 2262 3.746492 GTGGTGACAAGATTGTGGTAGAC 59.254 47.826 2.31 0.00 46.06 2.59
2186 2276 1.774254 ACCTCAAGATTGGTGGTGACA 59.226 47.619 9.31 0.00 35.36 3.58
2667 2757 7.448748 TCTCATGCATATCAAGATCCAAATG 57.551 36.000 0.00 0.00 0.00 2.32
2700 2790 4.458989 AGCAAGGCATTTCGAGAATGTTAA 59.541 37.500 16.39 0.00 0.00 2.01
2752 2842 9.473007 CCCTTATCAGTGATTCTAGATAGATGA 57.527 37.037 11.68 0.00 31.40 2.92
2981 3071 3.586892 GACTTTCTTACCAAGACGGAGG 58.413 50.000 0.00 0.00 37.23 4.30
3029 3119 2.163010 ACGCTGCTCTTGATCCAATTTG 59.837 45.455 0.00 0.00 0.00 2.32
3032 3122 1.065926 TCACGCTGCTCTTGATCCAAT 60.066 47.619 0.00 0.00 0.00 3.16
3251 3341 7.409697 CGAAATGTAAATGAGGTATGGTTGAG 58.590 38.462 0.00 0.00 0.00 3.02
3275 3365 1.308998 ACTGGTCAGCAAAGAAACCG 58.691 50.000 0.00 0.00 34.39 4.44
3290 3380 3.057245 GCTGGCCTTTTAGAAAGAACTGG 60.057 47.826 3.32 0.00 0.00 4.00
3308 3398 1.246737 GCTTTGGGAGAACAGGCTGG 61.247 60.000 20.34 0.58 0.00 4.85
3395 3485 4.142138 ACCTTGAGAACGATATCACCTGAC 60.142 45.833 3.12 0.00 0.00 3.51
3719 3809 3.162666 TGACGTTGATGAAGTACCTCCT 58.837 45.455 0.00 0.00 0.00 3.69
3725 3815 5.050363 GCAAGAACTTGACGTTGATGAAGTA 60.050 40.000 17.19 0.00 42.93 2.24
3729 3819 3.248363 CAGCAAGAACTTGACGTTGATGA 59.752 43.478 17.19 0.00 42.93 2.92
3953 4043 3.013276 TGTCTTCAGTCTACGTTGCAG 57.987 47.619 0.00 0.00 0.00 4.41
3956 4046 7.009631 CCTGAATATTGTCTTCAGTCTACGTTG 59.990 40.741 11.01 0.00 45.26 4.10
3996 4087 5.175859 GTGTTCCTTCCGATGTTCAGATTA 58.824 41.667 0.00 0.00 0.00 1.75
4089 4183 8.219105 GCAACATGTTGTTAGTACTTACTGTAC 58.781 37.037 33.01 11.61 43.80 2.90
4091 4185 6.204108 GGCAACATGTTGTTAGTACTTACTGT 59.796 38.462 33.01 6.26 38.77 3.55
4128 4224 4.180723 TCACTACTTTTTATGGAGGGGGT 58.819 43.478 0.00 0.00 0.00 4.95
4129 4225 4.855298 TCACTACTTTTTATGGAGGGGG 57.145 45.455 0.00 0.00 0.00 5.40
4130 4226 6.253946 AGATCACTACTTTTTATGGAGGGG 57.746 41.667 0.00 0.00 0.00 4.79
4131 4227 9.110502 GTTTAGATCACTACTTTTTATGGAGGG 57.889 37.037 0.00 0.00 0.00 4.30
4132 4228 9.667107 TGTTTAGATCACTACTTTTTATGGAGG 57.333 33.333 0.00 0.00 0.00 4.30
4155 4251 9.892130 CCCTCTGTAAAGAAATATAAGAGTGTT 57.108 33.333 0.00 0.00 0.00 3.32
4156 4252 9.268282 TCCCTCTGTAAAGAAATATAAGAGTGT 57.732 33.333 0.00 0.00 0.00 3.55
4157 4253 9.757227 CTCCCTCTGTAAAGAAATATAAGAGTG 57.243 37.037 0.00 0.00 0.00 3.51
4158 4254 9.495382 ACTCCCTCTGTAAAGAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
4161 4257 9.984190 GGTACTCCCTCTGTAAAGAAATATAAG 57.016 37.037 0.00 0.00 0.00 1.73
4162 4258 9.725206 AGGTACTCCCTCTGTAAAGAAATATAA 57.275 33.333 0.00 0.00 40.71 0.98
4164 4260 9.900112 ATAGGTACTCCCTCTGTAAAGAAATAT 57.100 33.333 0.00 0.00 44.81 1.28
4165 4261 9.144298 CATAGGTACTCCCTCTGTAAAGAAATA 57.856 37.037 0.00 0.00 44.81 1.40
4166 4262 7.624077 ACATAGGTACTCCCTCTGTAAAGAAAT 59.376 37.037 0.00 0.00 45.97 2.17
4167 4263 6.958192 ACATAGGTACTCCCTCTGTAAAGAAA 59.042 38.462 0.00 0.00 45.97 2.52
4168 4264 6.500336 ACATAGGTACTCCCTCTGTAAAGAA 58.500 40.000 0.00 0.00 45.97 2.52
4169 4265 6.088541 ACATAGGTACTCCCTCTGTAAAGA 57.911 41.667 0.00 0.00 45.97 2.52
4170 4266 6.016108 GCTACATAGGTACTCCCTCTGTAAAG 60.016 46.154 7.68 1.94 46.50 1.85
4171 4267 5.832060 GCTACATAGGTACTCCCTCTGTAAA 59.168 44.000 7.68 0.00 46.50 2.01
4172 4268 5.383476 GCTACATAGGTACTCCCTCTGTAA 58.617 45.833 7.68 0.00 46.50 2.41
4173 4269 4.202545 GGCTACATAGGTACTCCCTCTGTA 60.203 50.000 6.48 6.48 45.97 2.74
4175 4271 3.158676 GGCTACATAGGTACTCCCTCTG 58.841 54.545 0.00 0.00 44.81 3.35
4176 4272 2.789992 TGGCTACATAGGTACTCCCTCT 59.210 50.000 0.00 0.00 44.81 3.69
4177 4273 3.240310 TGGCTACATAGGTACTCCCTC 57.760 52.381 0.00 0.00 44.81 4.30
4179 4275 3.511934 CAGATGGCTACATAGGTACTCCC 59.488 52.174 0.00 0.00 41.75 4.30
4180 4276 3.056465 GCAGATGGCTACATAGGTACTCC 60.056 52.174 0.00 0.00 38.95 3.85
4181 4277 3.574396 TGCAGATGGCTACATAGGTACTC 59.426 47.826 0.00 0.00 45.15 2.59
4182 4278 3.576861 TGCAGATGGCTACATAGGTACT 58.423 45.455 0.00 0.00 45.15 2.73
4183 4279 4.021104 TCATGCAGATGGCTACATAGGTAC 60.021 45.833 0.00 0.00 45.15 3.34
4323 4848 7.503991 CGACAATCCATGAAAATTTCACAAAG 58.496 34.615 10.91 1.98 43.48 2.77
4325 4850 5.404968 GCGACAATCCATGAAAATTTCACAA 59.595 36.000 10.91 0.05 43.48 3.33
4326 4851 4.922692 GCGACAATCCATGAAAATTTCACA 59.077 37.500 10.91 0.00 43.48 3.58
4327 4852 5.163513 AGCGACAATCCATGAAAATTTCAC 58.836 37.500 10.91 0.00 43.48 3.18
4328 4853 5.389859 AGCGACAATCCATGAAAATTTCA 57.610 34.783 11.10 11.10 45.01 2.69
4390 4915 0.681887 TTGCTGCCAGACATCATGGG 60.682 55.000 0.00 0.00 38.33 4.00
4436 4961 2.613691 CCAAATGCCATGCTGAGTTTC 58.386 47.619 0.00 0.00 0.00 2.78
4438 4963 0.248289 GCCAAATGCCATGCTGAGTT 59.752 50.000 0.00 0.00 0.00 3.01
4439 4964 0.901114 TGCCAAATGCCATGCTGAGT 60.901 50.000 0.00 0.00 40.16 3.41
4441 4966 1.894512 CTGCCAAATGCCATGCTGA 59.105 52.632 0.00 0.00 40.16 4.26
4444 4969 1.153249 ATGCTGCCAAATGCCATGC 60.153 52.632 0.00 0.00 40.16 4.06
4446 4971 1.200519 AAGATGCTGCCAAATGCCAT 58.799 45.000 0.00 0.00 40.16 4.40
4447 4972 1.752498 CTAAGATGCTGCCAAATGCCA 59.248 47.619 0.00 0.00 40.16 4.92
4481 5006 8.962884 ATAAATCTCAGTTGCATACACATGTA 57.037 30.769 0.00 0.00 34.40 2.29
4482 5007 7.870509 ATAAATCTCAGTTGCATACACATGT 57.129 32.000 0.00 0.00 34.40 3.21
4483 5008 9.264719 TCTATAAATCTCAGTTGCATACACATG 57.735 33.333 0.00 0.00 35.07 3.21
4484 5009 9.265901 GTCTATAAATCTCAGTTGCATACACAT 57.734 33.333 0.00 0.00 0.00 3.21
4485 5010 8.478066 AGTCTATAAATCTCAGTTGCATACACA 58.522 33.333 0.00 0.00 0.00 3.72
4592 5117 0.386476 TGGTAGCGTAGGTTATGGCG 59.614 55.000 0.00 0.00 40.68 5.69
4624 5151 0.804364 GCGTGCCTGATGATCAACAA 59.196 50.000 7.13 0.00 0.00 2.83
4626 5153 1.349627 CGCGTGCCTGATGATCAAC 59.650 57.895 0.00 0.00 0.00 3.18
4627 5154 1.079197 ACGCGTGCCTGATGATCAA 60.079 52.632 12.93 0.00 0.00 2.57
4628 5155 1.519234 GACGCGTGCCTGATGATCA 60.519 57.895 20.70 0.00 0.00 2.92
4629 5156 2.580470 CGACGCGTGCCTGATGATC 61.580 63.158 20.70 0.00 0.00 2.92
4630 5157 2.583319 CGACGCGTGCCTGATGAT 60.583 61.111 20.70 0.00 0.00 2.45
4631 5158 4.050934 ACGACGCGTGCCTGATGA 62.051 61.111 20.70 0.00 39.18 2.92
4683 5213 1.534595 CAGCCTGCTCAACAAACTCTC 59.465 52.381 0.00 0.00 0.00 3.20
4701 5231 4.803426 GGACGCGCTCCTCACCAG 62.803 72.222 5.73 0.00 35.89 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.