Multiple sequence alignment - TraesCS6A01G269500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G269500 chr6A 100.000 5421 0 0 1 5421 495697089 495691669 0.000000e+00 10011.0
1 TraesCS6A01G269500 chr6A 82.872 397 39 9 4796 5191 2072684 2072316 4.050000e-86 329.0
2 TraesCS6A01G269500 chr6B 92.944 2055 84 27 2704 4735 532345724 532343708 0.000000e+00 2935.0
3 TraesCS6A01G269500 chr6B 85.725 2655 159 94 1 2589 532348433 532345933 0.000000e+00 2601.0
4 TraesCS6A01G269500 chr6D 86.766 2743 150 89 1 2636 347677271 347679907 0.000000e+00 2857.0
5 TraesCS6A01G269500 chr6D 93.113 1902 67 32 2906 4788 347680300 347682156 0.000000e+00 2728.0
6 TraesCS6A01G269500 chr6D 95.217 230 9 2 2670 2897 347680010 347680239 3.990000e-96 363.0
7 TraesCS6A01G269500 chr5A 85.176 398 31 11 4796 5193 232292322 232292691 3.060000e-102 383.0
8 TraesCS6A01G269500 chr5A 82.620 397 40 5 4796 5191 576926516 576926884 1.880000e-84 324.0
9 TraesCS6A01G269500 chr7A 84.224 393 31 8 4796 5187 247210841 247210479 2.400000e-93 353.0
10 TraesCS6A01G269500 chr7A 91.925 161 9 4 4798 4958 315530607 315530763 7.070000e-54 222.0
11 TraesCS6A01G269500 chr2A 83.130 409 35 15 4790 5194 202768844 202769222 5.200000e-90 342.0
12 TraesCS6A01G269500 chr2A 91.026 234 19 2 4958 5189 413885555 413885322 1.130000e-81 315.0
13 TraesCS6A01G269500 chr2A 87.429 175 18 3 4068 4240 689931801 689931629 1.190000e-46 198.0
14 TraesCS6A01G269500 chr2A 89.815 108 7 2 3389 3495 689932549 689932445 9.470000e-28 135.0
15 TraesCS6A01G269500 chr2A 86.735 98 9 2 3937 4030 689931905 689931808 7.430000e-19 106.0
16 TraesCS6A01G269500 chr2A 85.567 97 6 5 3037 3127 689932853 689932759 1.610000e-15 95.3
17 TraesCS6A01G269500 chr4D 83.127 403 33 17 4796 5194 179844328 179843957 8.700000e-88 335.0
18 TraesCS6A01G269500 chr4D 82.995 394 39 8 4796 5188 385193177 385192811 1.130000e-86 331.0
19 TraesCS6A01G269500 chr4D 82.793 401 35 11 4798 5193 273297935 273297564 1.460000e-85 327.0
20 TraesCS6A01G269500 chr4D 91.411 163 11 3 4796 4958 495146996 495146837 2.540000e-53 220.0
21 TraesCS6A01G269500 chr1A 83.000 400 38 15 4796 5193 226907241 226906870 8.700000e-88 335.0
22 TraesCS6A01G269500 chr5D 82.836 402 40 16 4796 5197 493345774 493345402 3.130000e-87 333.0
23 TraesCS6A01G269500 chr5D 88.976 127 14 0 4114 4240 558973779 558973653 2.020000e-34 158.0
24 TraesCS6A01G269500 chr7D 82.915 398 39 16 4796 5193 408463310 408462942 1.130000e-86 331.0
25 TraesCS6A01G269500 chr1D 82.842 373 36 3 4795 5167 299277445 299277101 5.270000e-80 309.0
26 TraesCS6A01G269500 chr4A 92.073 164 11 1 4795 4958 447592714 447592553 4.220000e-56 230.0
27 TraesCS6A01G269500 chr2D 91.463 164 12 1 4795 4958 211585051 211585212 1.960000e-54 224.0
28 TraesCS6A01G269500 chr2D 88.439 173 20 0 4068 4240 546452984 546453156 5.500000e-50 209.0
29 TraesCS6A01G269500 chr2D 87.143 140 8 5 3586 3717 546452462 546452599 3.380000e-32 150.0
30 TraesCS6A01G269500 chr2D 89.815 108 7 2 3389 3495 546452236 546452340 9.470000e-28 135.0
31 TraesCS6A01G269500 chr2D 87.129 101 7 2 3934 4031 546452877 546452974 5.740000e-20 110.0
32 TraesCS6A01G269500 chr2D 87.500 88 3 5 3037 3118 546451932 546452017 1.610000e-15 95.3
33 TraesCS6A01G269500 chr3A 91.411 163 12 2 4796 4958 358763452 358763612 7.070000e-54 222.0
34 TraesCS6A01G269500 chr2B 87.861 173 21 0 4068 4240 653276826 653276998 2.560000e-48 204.0
35 TraesCS6A01G269500 chr2B 86.232 138 13 1 3586 3717 653276306 653276443 1.570000e-30 145.0
36 TraesCS6A01G269500 chr2B 87.129 101 9 2 3934 4030 653276719 653276819 1.600000e-20 111.0
37 TraesCS6A01G269500 chr2B 85.567 97 6 5 3037 3127 653275782 653275876 1.610000e-15 95.3
38 TraesCS6A01G269500 chr5B 89.764 127 13 0 4114 4240 693185155 693185029 4.340000e-36 163.0
39 TraesCS6A01G269500 chr3D 87.402 127 16 0 4114 4240 467322144 467322018 4.380000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G269500 chr6A 495691669 495697089 5420 True 10011.000000 10011 100.000000 1 5421 1 chr6A.!!$R2 5420
1 TraesCS6A01G269500 chr6B 532343708 532348433 4725 True 2768.000000 2935 89.334500 1 4735 2 chr6B.!!$R1 4734
2 TraesCS6A01G269500 chr6D 347677271 347682156 4885 False 1982.666667 2857 91.698667 1 4788 3 chr6D.!!$F1 4787

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
666 693 0.387878 CGGCACTGACTGACTGACTC 60.388 60.0 0.0 0.0 0.0 3.36 F
1393 1471 0.034059 AAGAACACGAGGGAGCACAG 59.966 55.0 0.0 0.0 0.0 3.66 F
2047 2152 0.184211 CCTGCACCATCCATCCATCA 59.816 55.0 0.0 0.0 0.0 3.07 F
2364 2510 0.247814 CTAGGCGAAAATGTGCTGCG 60.248 55.0 0.0 0.0 0.0 5.18 F
2748 3043 0.666274 AGCGAGACGTTTGATTGCGA 60.666 50.0 0.0 0.0 0.0 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2067 2204 0.036671 GGTAAACACTCGAGGGGTGG 60.037 60.000 20.91 4.27 38.83 4.61 R
3349 3722 0.028242 CCTCCTCATCGTCTTCGTCG 59.972 60.000 0.00 0.00 38.33 5.12 R
3825 4201 1.367840 GGCGCGGGAGTAGAATGAT 59.632 57.895 8.83 0.00 0.00 2.45 R
4310 4686 3.702048 ACCACACCATCGGTCGGG 61.702 66.667 3.76 1.61 31.02 5.14 R
4436 4813 0.040603 GCTGCTTCAGTTCAGTGTGC 60.041 55.000 0.00 0.00 33.43 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.665056 CAGCAGCGCAGATAAATGAG 57.335 50.000 11.47 0.00 0.00 2.90
20 21 1.263484 CAGCAGCGCAGATAAATGAGG 59.737 52.381 11.47 0.00 0.00 3.86
21 22 1.134280 AGCAGCGCAGATAAATGAGGT 60.134 47.619 11.47 0.00 0.00 3.85
22 23 1.262683 GCAGCGCAGATAAATGAGGTC 59.737 52.381 11.47 0.00 0.00 3.85
43 44 4.089636 GTCCGTCGTAGAACTTGAATGAAC 59.910 45.833 0.00 0.00 39.69 3.18
64 65 1.153086 TCTACCGAGTACCGAGCCC 60.153 63.158 5.46 0.00 41.76 5.19
69 70 3.468140 GAGTACCGAGCCCACCCC 61.468 72.222 0.00 0.00 0.00 4.95
141 142 0.947660 CATCCAGCATCGATCCGGTG 60.948 60.000 0.00 7.71 41.32 4.94
142 143 1.402896 ATCCAGCATCGATCCGGTGT 61.403 55.000 0.00 0.00 40.42 4.16
153 154 1.068741 GATCCGGTGTCACCCTATCAC 59.931 57.143 16.60 0.23 33.75 3.06
162 163 3.134623 TGTCACCCTATCACCATCATCAC 59.865 47.826 0.00 0.00 0.00 3.06
166 167 3.116356 ACCCTATCACCATCATCACCCTA 60.116 47.826 0.00 0.00 0.00 3.53
167 168 4.107072 CCCTATCACCATCATCACCCTAT 58.893 47.826 0.00 0.00 0.00 2.57
202 203 0.679960 GCAATCAACCTACCGGCCTT 60.680 55.000 0.00 0.00 0.00 4.35
203 204 1.094785 CAATCAACCTACCGGCCTTG 58.905 55.000 0.00 0.00 0.00 3.61
210 211 4.338710 TACCGGCCTTGCACCACC 62.339 66.667 0.00 0.00 0.00 4.61
228 229 4.074526 GGCCGCTGCTCTCTGTCA 62.075 66.667 0.00 0.00 37.74 3.58
229 230 2.047844 GCCGCTGCTCTCTGTCAA 60.048 61.111 0.00 0.00 33.53 3.18
292 301 3.056328 GGTTCCTTGCTCCGTGGC 61.056 66.667 0.00 0.00 0.00 5.01
395 412 2.801631 ATGGACGGAGCTAGCTGCC 61.802 63.158 28.04 22.52 44.23 4.85
467 490 4.266070 GCGTGCGCTCTCCCGATA 62.266 66.667 9.73 0.00 38.26 2.92
552 579 2.661866 GACGTGCGGTTGCTGTCT 60.662 61.111 0.00 0.00 41.17 3.41
597 624 2.985282 CCAAAGGCTGCGGCAGAA 60.985 61.111 32.72 0.00 40.87 3.02
666 693 0.387878 CGGCACTGACTGACTGACTC 60.388 60.000 0.00 0.00 0.00 3.36
743 770 3.766691 TGCTTCTCGTACGGGCCC 61.767 66.667 13.57 13.57 0.00 5.80
762 789 1.349259 CGGTGCCACGTAGTACAAGC 61.349 60.000 4.52 0.42 41.61 4.01
822 849 0.676782 AGACCCTTTACACATGCCGC 60.677 55.000 0.00 0.00 0.00 6.53
823 850 1.654023 GACCCTTTACACATGCCGCC 61.654 60.000 0.00 0.00 0.00 6.13
847 891 1.377725 CTGCACCGGAGCCTTTCAT 60.378 57.895 21.62 0.00 0.00 2.57
898 943 5.641209 GTGTCACTCAAGATAAGCATCAACT 59.359 40.000 0.00 0.00 33.21 3.16
899 944 5.640783 TGTCACTCAAGATAAGCATCAACTG 59.359 40.000 0.00 0.00 33.21 3.16
902 947 5.064452 CACTCAAGATAAGCATCAACTGACC 59.936 44.000 0.00 0.00 33.21 4.02
904 949 5.559770 TCAAGATAAGCATCAACTGACCAA 58.440 37.500 0.00 0.00 33.21 3.67
906 951 4.910195 AGATAAGCATCAACTGACCAACA 58.090 39.130 0.00 0.00 33.21 3.33
907 952 5.316167 AGATAAGCATCAACTGACCAACAA 58.684 37.500 0.00 0.00 33.21 2.83
908 953 5.948162 AGATAAGCATCAACTGACCAACAAT 59.052 36.000 0.00 0.00 33.21 2.71
909 954 4.510038 AAGCATCAACTGACCAACAATC 57.490 40.909 0.00 0.00 0.00 2.67
910 955 2.485426 AGCATCAACTGACCAACAATCG 59.515 45.455 0.00 0.00 0.00 3.34
911 956 2.226437 GCATCAACTGACCAACAATCGT 59.774 45.455 0.00 0.00 0.00 3.73
914 959 5.561919 GCATCAACTGACCAACAATCGTTTA 60.562 40.000 0.00 0.00 31.13 2.01
922 967 9.485206 ACTGACCAACAATCGTTTATATATACC 57.515 33.333 0.00 0.00 31.13 2.73
940 985 4.206958 TGCGATGCAGTGTGATCC 57.793 55.556 0.00 0.00 33.32 3.36
958 1016 2.588989 GGAGCAGGGGAGAAGCAG 59.411 66.667 0.00 0.00 0.00 4.24
1038 1098 3.296709 CTCGACCAAGGACGGTGGG 62.297 68.421 10.76 0.00 40.22 4.61
1120 1180 4.023107 CCTCACAGGTATGTATGTACTCCG 60.023 50.000 0.00 0.00 37.65 4.63
1121 1181 4.529897 TCACAGGTATGTATGTACTCCGT 58.470 43.478 0.00 0.00 37.65 4.69
1123 1183 3.562973 ACAGGTATGTATGTACTCCGTCG 59.437 47.826 0.00 0.00 38.09 5.12
1124 1184 3.562973 CAGGTATGTATGTACTCCGTCGT 59.437 47.826 0.00 0.00 0.00 4.34
1126 1186 2.486951 ATGTATGTACTCCGTCGTGC 57.513 50.000 0.00 0.00 0.00 5.34
1133 1193 0.800631 TACTCCGTCGTGCAGTACTG 59.199 55.000 18.93 18.93 0.00 2.74
1137 1197 1.504900 CGTCGTGCAGTACTGGCTA 59.495 57.895 23.95 5.45 0.00 3.93
1138 1198 0.523546 CGTCGTGCAGTACTGGCTAG 60.524 60.000 23.95 13.29 0.00 3.42
1139 1199 0.526662 GTCGTGCAGTACTGGCTAGT 59.473 55.000 23.95 8.18 40.99 2.57
1140 1200 1.741706 GTCGTGCAGTACTGGCTAGTA 59.258 52.381 23.95 5.74 38.36 1.82
1177 1237 7.275999 GCATCTTTACCTACTCACTTAGTGTTC 59.724 40.741 12.41 0.00 39.39 3.18
1182 1242 4.021894 ACCTACTCACTTAGTGTTCTGCTG 60.022 45.833 12.41 0.00 39.39 4.41
1203 1263 3.577848 TGCTGCATCCCAACAAATAAACT 59.422 39.130 0.00 0.00 0.00 2.66
1205 1265 4.414852 CTGCATCCCAACAAATAAACTCG 58.585 43.478 0.00 0.00 0.00 4.18
1229 1289 3.308035 TCCCGAGGAAGAACAGCTATA 57.692 47.619 0.00 0.00 0.00 1.31
1230 1290 3.638860 TCCCGAGGAAGAACAGCTATAA 58.361 45.455 0.00 0.00 0.00 0.98
1231 1291 3.637229 TCCCGAGGAAGAACAGCTATAAG 59.363 47.826 0.00 0.00 0.00 1.73
1232 1292 3.385577 CCGAGGAAGAACAGCTATAAGC 58.614 50.000 0.00 0.00 42.84 3.09
1273 1333 2.913613 CTTCTGCTTTTTCTGCTCGTG 58.086 47.619 0.00 0.00 0.00 4.35
1287 1362 4.459973 CGTGCAGAGAGTACCACG 57.540 61.111 5.84 5.84 43.83 4.94
1288 1363 1.579932 CGTGCAGAGAGTACCACGT 59.420 57.895 10.67 0.00 44.15 4.49
1393 1471 0.034059 AAGAACACGAGGGAGCACAG 59.966 55.000 0.00 0.00 0.00 3.66
1396 1474 2.031012 CACGAGGGAGCACAGCAA 59.969 61.111 0.00 0.00 0.00 3.91
1402 1480 0.987294 AGGGAGCACAGCAATACACT 59.013 50.000 0.00 0.00 0.00 3.55
1403 1481 2.168521 GAGGGAGCACAGCAATACACTA 59.831 50.000 0.00 0.00 0.00 2.74
1404 1482 2.093447 AGGGAGCACAGCAATACACTAC 60.093 50.000 0.00 0.00 0.00 2.73
1405 1483 2.354704 GGGAGCACAGCAATACACTACA 60.355 50.000 0.00 0.00 0.00 2.74
1406 1484 2.673368 GGAGCACAGCAATACACTACAC 59.327 50.000 0.00 0.00 0.00 2.90
1407 1485 3.325870 GAGCACAGCAATACACTACACA 58.674 45.455 0.00 0.00 0.00 3.72
1408 1486 3.935203 GAGCACAGCAATACACTACACAT 59.065 43.478 0.00 0.00 0.00 3.21
1409 1487 5.084818 AGCACAGCAATACACTACACATA 57.915 39.130 0.00 0.00 0.00 2.29
1410 1488 5.111989 AGCACAGCAATACACTACACATAG 58.888 41.667 0.00 0.00 34.25 2.23
1411 1489 4.271049 GCACAGCAATACACTACACATAGG 59.729 45.833 0.00 0.00 32.08 2.57
1412 1490 5.660460 CACAGCAATACACTACACATAGGA 58.340 41.667 0.00 0.00 32.08 2.94
1413 1491 5.750547 CACAGCAATACACTACACATAGGAG 59.249 44.000 0.00 0.00 32.08 3.69
1414 1492 5.422331 ACAGCAATACACTACACATAGGAGT 59.578 40.000 0.00 0.00 32.08 3.85
1415 1493 6.605995 ACAGCAATACACTACACATAGGAGTA 59.394 38.462 0.00 0.00 32.08 2.59
1416 1494 6.918569 CAGCAATACACTACACATAGGAGTAC 59.081 42.308 0.00 0.00 30.52 2.73
1417 1495 6.834451 AGCAATACACTACACATAGGAGTACT 59.166 38.462 0.00 0.00 30.52 2.73
1418 1496 7.997223 AGCAATACACTACACATAGGAGTACTA 59.003 37.037 0.00 0.00 35.80 1.82
1419 1497 8.074972 GCAATACACTACACATAGGAGTACTAC 58.925 40.741 0.00 0.00 33.70 2.73
1420 1498 9.117183 CAATACACTACACATAGGAGTACTACA 57.883 37.037 8.10 0.00 33.70 2.74
1421 1499 6.998968 ACACTACACATAGGAGTACTACAC 57.001 41.667 8.10 0.00 33.70 2.90
1422 1500 6.479006 ACACTACACATAGGAGTACTACACA 58.521 40.000 8.10 0.00 33.70 3.72
1423 1501 6.598457 ACACTACACATAGGAGTACTACACAG 59.402 42.308 8.10 0.00 33.70 3.66
1448 1539 5.133221 ACACAGCATTCCAGTCTAGTTTTT 58.867 37.500 0.00 0.00 0.00 1.94
1471 1562 1.305930 ATGAAAAGCGGGAGAACGGC 61.306 55.000 0.00 0.00 44.96 5.68
1505 1596 5.105554 GGAGCTAGTAGTACATGATGGATGG 60.106 48.000 0.00 0.00 36.23 3.51
1511 1602 2.507058 AGTACATGATGGATGGCAGTGT 59.493 45.455 0.00 0.00 36.23 3.55
1531 1622 6.016360 CAGTGTCCTCACATTTCCAAACATTA 60.016 38.462 1.36 0.00 46.01 1.90
1568 1659 2.062636 GTCAAGGCCCAGGGGAATATA 58.937 52.381 7.91 0.00 37.50 0.86
1574 1665 0.322546 CCCAGGGGAATATAAGCGCC 60.323 60.000 2.29 0.00 37.50 6.53
1658 1752 2.840651 AGGATGGGATTTGTTCTCGTCT 59.159 45.455 0.00 0.00 40.27 4.18
1705 1799 0.601841 CCTTTCGCACTTGGTACCGT 60.602 55.000 7.57 0.00 0.00 4.83
1706 1800 1.223187 CTTTCGCACTTGGTACCGTT 58.777 50.000 7.57 0.00 0.00 4.44
1707 1801 0.938713 TTTCGCACTTGGTACCGTTG 59.061 50.000 7.57 5.14 0.00 4.10
1708 1802 1.500512 TTCGCACTTGGTACCGTTGC 61.501 55.000 17.97 17.97 0.00 4.17
1714 1808 1.944709 ACTTGGTACCGTTGCTTGTTC 59.055 47.619 7.57 0.00 0.00 3.18
1717 1811 0.509929 GGTACCGTTGCTTGTTCGTC 59.490 55.000 0.00 0.00 0.00 4.20
1729 1823 3.058160 TTCGTCCGTCCGTCCTCC 61.058 66.667 0.00 0.00 0.00 4.30
1737 1831 3.068691 TCCGTCCTCCTTGCTCCG 61.069 66.667 0.00 0.00 0.00 4.63
1783 1878 0.407139 ATGGGAGATGCTAATGGGGC 59.593 55.000 0.00 0.00 0.00 5.80
1861 1956 9.646427 CTTCCAAGCCAATACTATAATACTCTC 57.354 37.037 0.00 0.00 0.00 3.20
1926 2026 3.052455 TGCTCACGCAAGGAATAAAGA 57.948 42.857 0.00 0.00 44.62 2.52
1949 2049 1.803366 GCCGTAGCCCGTAGTAGCAT 61.803 60.000 0.00 0.00 33.66 3.79
1969 2074 1.275291 TCACTCATTCCGTGGTCCTTC 59.725 52.381 0.00 0.00 33.31 3.46
1981 2086 2.204291 TCCTTCCATGGGCCTGGT 60.204 61.111 13.02 0.00 37.57 4.00
1982 2087 2.276740 CCTTCCATGGGCCTGGTC 59.723 66.667 13.02 0.00 37.57 4.02
1983 2088 2.124570 CTTCCATGGGCCTGGTCG 60.125 66.667 13.02 9.25 37.57 4.79
1984 2089 4.424711 TTCCATGGGCCTGGTCGC 62.425 66.667 13.02 0.00 37.57 5.19
1986 2091 4.738998 CCATGGGCCTGGTCGCAA 62.739 66.667 2.85 0.00 32.60 4.85
1987 2092 3.136123 CATGGGCCTGGTCGCAAG 61.136 66.667 4.53 4.59 32.60 4.01
1988 2093 4.431131 ATGGGCCTGGTCGCAAGG 62.431 66.667 4.53 0.00 37.91 3.61
1995 2100 3.003173 TGGTCGCAAGGCTAGGCT 61.003 61.111 14.10 14.10 45.30 4.58
1996 2101 2.269241 GGTCGCAAGGCTAGGCTT 59.731 61.111 24.88 24.88 45.30 4.35
1997 2102 1.815840 GGTCGCAAGGCTAGGCTTC 60.816 63.158 27.39 19.77 45.30 3.86
1998 2103 1.079127 GTCGCAAGGCTAGGCTTCA 60.079 57.895 27.39 12.45 40.30 3.02
1999 2104 1.086634 GTCGCAAGGCTAGGCTTCAG 61.087 60.000 27.39 22.32 40.30 3.02
2000 2105 1.219124 CGCAAGGCTAGGCTTCAGA 59.781 57.895 27.39 0.00 0.00 3.27
2001 2106 0.809241 CGCAAGGCTAGGCTTCAGAG 60.809 60.000 27.39 17.45 0.00 3.35
2002 2107 0.251634 GCAAGGCTAGGCTTCAGAGT 59.748 55.000 27.39 4.21 0.00 3.24
2010 2115 1.153349 GGCTTCAGAGTTAGGCCCG 60.153 63.158 0.00 0.00 37.12 6.13
2045 2150 0.995132 TCCCTGCACCATCCATCCAT 60.995 55.000 0.00 0.00 0.00 3.41
2046 2151 0.538977 CCCTGCACCATCCATCCATC 60.539 60.000 0.00 0.00 0.00 3.51
2047 2152 0.184211 CCTGCACCATCCATCCATCA 59.816 55.000 0.00 0.00 0.00 3.07
2048 2153 1.203013 CCTGCACCATCCATCCATCAT 60.203 52.381 0.00 0.00 0.00 2.45
2049 2154 2.160205 CTGCACCATCCATCCATCATC 58.840 52.381 0.00 0.00 0.00 2.92
2050 2155 1.202964 TGCACCATCCATCCATCATCC 60.203 52.381 0.00 0.00 0.00 3.51
2058 2163 1.337917 CCATCCATCATCCTCTCTGCG 60.338 57.143 0.00 0.00 0.00 5.18
2067 2204 2.515926 TCCTCTCTGCGTTATCATGC 57.484 50.000 0.00 0.00 35.21 4.06
2071 2208 0.940126 CTCTGCGTTATCATGCCACC 59.060 55.000 0.00 0.00 33.44 4.61
2152 2289 8.055986 GCTTTTGCAATCAGTTAAAGTACAAAC 58.944 33.333 0.00 0.00 46.58 2.93
2153 2290 7.672351 TTTGCAATCAGTTAAAGTACAAACG 57.328 32.000 0.00 0.00 0.00 3.60
2157 2294 8.065407 TGCAATCAGTTAAAGTACAAACGTTAG 58.935 33.333 0.00 0.00 32.33 2.34
2210 2347 0.250209 GCTGGCTGATCATGATCGGT 60.250 55.000 34.37 6.32 44.17 4.69
2211 2348 1.509703 CTGGCTGATCATGATCGGTG 58.490 55.000 34.37 24.40 44.17 4.94
2215 2352 1.563435 CTGATCATGATCGGTGCCGC 61.563 60.000 29.25 7.88 40.63 6.53
2221 2358 1.369091 ATGATCGGTGCCGCTTTGTC 61.369 55.000 5.64 0.33 39.59 3.18
2230 2367 1.079503 GCCGCTTTGTCTTGGAGTAG 58.920 55.000 0.00 0.00 0.00 2.57
2364 2510 0.247814 CTAGGCGAAAATGTGCTGCG 60.248 55.000 0.00 0.00 0.00 5.18
2383 2529 3.056607 TGCGTGGTTAGTTTCCTACTACC 60.057 47.826 0.00 0.00 39.05 3.18
2397 2543 7.838079 TTCCTACTACCACTAGTTACAACAA 57.162 36.000 0.00 0.00 34.79 2.83
2398 2544 7.219484 TCCTACTACCACTAGTTACAACAAC 57.781 40.000 0.00 0.00 34.79 3.32
2399 2545 6.072508 TCCTACTACCACTAGTTACAACAACG 60.073 42.308 0.00 0.00 34.79 4.10
2467 2613 3.055591 AGACTGATGAATTATCGCGCAG 58.944 45.455 8.75 1.63 38.71 5.18
2473 2619 1.202475 TGAATTATCGCGCAGTAGGCA 60.202 47.619 8.75 0.00 45.17 4.75
2564 2714 1.604593 CCCTGTGGCTCTTGGGTTG 60.605 63.158 9.12 0.00 35.13 3.77
2586 2736 1.217882 CGGAGCCGTTCATTATGGAC 58.782 55.000 0.00 0.00 34.56 4.02
2616 2766 0.951040 GGAAATATCAGGCGCTCCCG 60.951 60.000 7.64 0.00 39.21 5.14
2636 2786 2.738846 CGATGCTTAGGTGATACCATGC 59.261 50.000 0.28 2.49 41.95 4.06
2638 2788 1.142870 TGCTTAGGTGATACCATGCCC 59.857 52.381 0.28 0.00 41.95 5.36
2639 2789 1.545651 GCTTAGGTGATACCATGCCCC 60.546 57.143 0.28 0.00 41.95 5.80
2667 2906 2.244695 TGTGGTAGTGGTGGTGTCTAG 58.755 52.381 0.00 0.00 0.00 2.43
2668 2907 2.158430 TGTGGTAGTGGTGGTGTCTAGA 60.158 50.000 0.00 0.00 0.00 2.43
2670 2909 2.377531 TGGTAGTGGTGGTGTCTAGAGA 59.622 50.000 0.00 0.00 0.00 3.10
2671 2910 3.018149 GGTAGTGGTGGTGTCTAGAGAG 58.982 54.545 0.00 0.00 0.00 3.20
2672 2911 3.308259 GGTAGTGGTGGTGTCTAGAGAGA 60.308 52.174 0.00 0.00 0.00 3.10
2748 3043 0.666274 AGCGAGACGTTTGATTGCGA 60.666 50.000 0.00 0.00 0.00 5.10
2839 3141 1.481901 TACACCCCGGCAAGCTAACA 61.482 55.000 0.00 0.00 0.00 2.41
2885 3187 1.480954 GTTGGGTCCTAATCGAGCAGA 59.519 52.381 0.00 0.00 31.74 4.26
2886 3188 1.860641 TGGGTCCTAATCGAGCAGAA 58.139 50.000 0.00 0.00 31.74 3.02
2888 3190 2.771943 TGGGTCCTAATCGAGCAGAATT 59.228 45.455 0.00 0.00 31.74 2.17
2890 3192 4.407621 TGGGTCCTAATCGAGCAGAATTAA 59.592 41.667 0.00 0.00 31.74 1.40
2891 3193 4.750598 GGGTCCTAATCGAGCAGAATTAAC 59.249 45.833 0.00 0.00 31.74 2.01
2892 3194 5.357257 GGTCCTAATCGAGCAGAATTAACA 58.643 41.667 0.00 0.00 0.00 2.41
2968 3337 9.559958 AATTCGAGTCACAATTGATATTTTGTC 57.440 29.630 13.59 0.00 33.93 3.18
3012 3385 8.731275 TTACATTACATTAACTGGTGATCTGG 57.269 34.615 0.00 0.00 0.00 3.86
3535 3911 2.016704 CGATGCCGGTATCGTGAGC 61.017 63.158 37.19 11.15 43.60 4.26
3551 3927 3.242706 CGTGAGCAGAGACTGAGTGATAG 60.243 52.174 0.00 0.00 32.44 2.08
3574 3950 6.175471 AGTGATGAACTGATGAAGCAACATA 58.825 36.000 0.00 0.00 37.88 2.29
3779 4155 1.201647 TCCTCTCGTTTCATCCGTGTC 59.798 52.381 0.00 0.00 0.00 3.67
3788 4164 2.896745 TCATCCGTGTCCTGATCATG 57.103 50.000 0.00 0.00 0.00 3.07
3825 4201 1.900245 TGCATTGCAAGCAGAGAGAA 58.100 45.000 9.33 0.00 37.02 2.87
3873 4249 4.767255 GAGAGCCCGGTGGTGCTG 62.767 72.222 7.73 0.00 38.11 4.41
3930 4306 2.602267 ATCACCCGGACCACGTCA 60.602 61.111 0.73 0.00 42.24 4.35
4274 4650 1.503542 CGACCATCACCTTTGCTGC 59.496 57.895 0.00 0.00 0.00 5.25
4310 4686 1.977412 GCTCACGTGAACTCGACTAAC 59.023 52.381 20.49 0.00 34.70 2.34
4446 4823 2.375766 CGAGCGAGGCACACTGAAC 61.376 63.158 0.00 0.00 0.00 3.18
4447 4824 1.005630 GAGCGAGGCACACTGAACT 60.006 57.895 0.00 0.00 0.00 3.01
4448 4825 1.287730 GAGCGAGGCACACTGAACTG 61.288 60.000 0.00 0.00 0.00 3.16
4449 4826 1.300931 GCGAGGCACACTGAACTGA 60.301 57.895 0.00 0.00 0.00 3.41
4450 4827 0.880278 GCGAGGCACACTGAACTGAA 60.880 55.000 0.00 0.00 0.00 3.02
4484 4861 0.179215 CGTACGTACGTCAGGTGACC 60.179 60.000 33.95 0.00 44.13 4.02
4492 4869 4.242586 TCAGGTGACCCGGGTCCA 62.243 66.667 43.35 30.51 43.97 4.02
4537 4914 6.100279 AGTGATGGTGATGGTGTGATACTTAT 59.900 38.462 0.00 0.00 0.00 1.73
4538 4915 7.290014 AGTGATGGTGATGGTGTGATACTTATA 59.710 37.037 0.00 0.00 0.00 0.98
4569 4949 1.404315 GCTAGTGCTGCCGTTAGTTCT 60.404 52.381 0.00 0.00 36.03 3.01
4653 5033 1.706443 CGGACAGTTACCGGTTCTTC 58.294 55.000 15.04 11.57 45.65 2.87
4736 5125 5.652994 TTTTTACCTGCTTTGTGTGAACT 57.347 34.783 0.00 0.00 0.00 3.01
4739 5128 3.508744 ACCTGCTTTGTGTGAACTTTG 57.491 42.857 0.00 0.00 0.00 2.77
4740 5129 3.088532 ACCTGCTTTGTGTGAACTTTGA 58.911 40.909 0.00 0.00 0.00 2.69
4741 5130 3.701040 ACCTGCTTTGTGTGAACTTTGAT 59.299 39.130 0.00 0.00 0.00 2.57
4742 5131 4.202050 ACCTGCTTTGTGTGAACTTTGATC 60.202 41.667 0.00 0.00 0.00 2.92
4744 5133 4.923893 TGCTTTGTGTGAACTTTGATCTG 58.076 39.130 0.00 0.00 0.00 2.90
4745 5134 4.398988 TGCTTTGTGTGAACTTTGATCTGT 59.601 37.500 0.00 0.00 0.00 3.41
4766 5161 8.675705 TCTGTTTAAATCTCACATGAACTTCA 57.324 30.769 0.00 0.00 0.00 3.02
4767 5162 8.559536 TCTGTTTAAATCTCACATGAACTTCAC 58.440 33.333 0.00 0.00 0.00 3.18
4784 5179 2.215196 TCACAACGGTAAGAAACAGGC 58.785 47.619 0.00 0.00 0.00 4.85
4785 5180 1.944024 CACAACGGTAAGAAACAGGCA 59.056 47.619 0.00 0.00 0.00 4.75
4789 5184 4.098807 ACAACGGTAAGAAACAGGCAAAAT 59.901 37.500 0.00 0.00 0.00 1.82
4790 5185 5.299782 ACAACGGTAAGAAACAGGCAAAATA 59.700 36.000 0.00 0.00 0.00 1.40
4791 5186 6.015772 ACAACGGTAAGAAACAGGCAAAATAT 60.016 34.615 0.00 0.00 0.00 1.28
4792 5187 7.175293 ACAACGGTAAGAAACAGGCAAAATATA 59.825 33.333 0.00 0.00 0.00 0.86
4793 5188 7.875327 ACGGTAAGAAACAGGCAAAATATAT 57.125 32.000 0.00 0.00 0.00 0.86
4794 5189 8.967664 ACGGTAAGAAACAGGCAAAATATATA 57.032 30.769 0.00 0.00 0.00 0.86
4795 5190 9.569122 ACGGTAAGAAACAGGCAAAATATATAT 57.431 29.630 0.00 0.00 0.00 0.86
4800 5195 8.409358 AGAAACAGGCAAAATATATATCACCC 57.591 34.615 0.00 0.00 0.00 4.61
4801 5196 8.227507 AGAAACAGGCAAAATATATATCACCCT 58.772 33.333 0.00 0.00 0.00 4.34
4802 5197 7.765695 AACAGGCAAAATATATATCACCCTG 57.234 36.000 19.65 19.65 42.20 4.45
4803 5198 6.248433 ACAGGCAAAATATATATCACCCTGG 58.752 40.000 22.42 12.64 41.13 4.45
4804 5199 5.653769 CAGGCAAAATATATATCACCCTGGG 59.346 44.000 12.28 12.28 35.01 4.45
4805 5200 5.315914 AGGCAAAATATATATCACCCTGGGT 59.684 40.000 14.05 14.05 35.62 4.51
4821 5216 7.226059 ACCCTGGGTGAGAAATAATTATTCT 57.774 36.000 19.82 9.76 39.76 2.40
4822 5217 7.652554 ACCCTGGGTGAGAAATAATTATTCTT 58.347 34.615 19.82 3.05 37.26 2.52
4823 5218 7.780271 ACCCTGGGTGAGAAATAATTATTCTTC 59.220 37.037 19.82 11.60 37.26 2.87
4824 5219 7.779798 CCCTGGGTGAGAAATAATTATTCTTCA 59.220 37.037 11.08 13.68 37.26 3.02
4825 5220 8.624776 CCTGGGTGAGAAATAATTATTCTTCAC 58.375 37.037 27.21 27.21 37.26 3.18
4826 5221 8.519799 TGGGTGAGAAATAATTATTCTTCACC 57.480 34.615 34.54 34.54 45.88 4.02
4828 5223 7.941919 GGTGAGAAATAATTATTCTTCACCCC 58.058 38.462 33.63 23.25 43.85 4.95
4829 5224 7.014326 GGTGAGAAATAATTATTCTTCACCCCC 59.986 40.741 33.63 22.84 43.85 5.40
4830 5225 7.780271 GTGAGAAATAATTATTCTTCACCCCCT 59.220 37.037 26.11 7.29 37.26 4.79
4831 5226 7.998964 TGAGAAATAATTATTCTTCACCCCCTC 59.001 37.037 11.08 1.89 37.26 4.30
4832 5227 8.119062 AGAAATAATTATTCTTCACCCCCTCT 57.881 34.615 11.08 4.00 33.41 3.69
4833 5228 8.221251 AGAAATAATTATTCTTCACCCCCTCTC 58.779 37.037 11.08 1.25 33.41 3.20
4834 5229 7.713704 AATAATTATTCTTCACCCCCTCTCT 57.286 36.000 4.81 0.00 0.00 3.10
4835 5230 8.814448 AATAATTATTCTTCACCCCCTCTCTA 57.186 34.615 4.81 0.00 0.00 2.43
4836 5231 8.997301 ATAATTATTCTTCACCCCCTCTCTAT 57.003 34.615 0.00 0.00 0.00 1.98
4837 5232 7.713704 AATTATTCTTCACCCCCTCTCTATT 57.286 36.000 0.00 0.00 0.00 1.73
4838 5233 7.713704 ATTATTCTTCACCCCCTCTCTATTT 57.286 36.000 0.00 0.00 0.00 1.40
4839 5234 8.814448 ATTATTCTTCACCCCCTCTCTATTTA 57.186 34.615 0.00 0.00 0.00 1.40
4840 5235 6.755542 ATTCTTCACCCCCTCTCTATTTAG 57.244 41.667 0.00 0.00 0.00 1.85
4841 5236 4.557705 TCTTCACCCCCTCTCTATTTAGG 58.442 47.826 0.00 0.00 0.00 2.69
4842 5237 2.690840 TCACCCCCTCTCTATTTAGGC 58.309 52.381 0.00 0.00 0.00 3.93
4843 5238 2.022428 TCACCCCCTCTCTATTTAGGCA 60.022 50.000 0.00 0.00 0.00 4.75
4844 5239 2.982488 CACCCCCTCTCTATTTAGGCAT 59.018 50.000 0.00 0.00 0.00 4.40
4845 5240 3.008485 CACCCCCTCTCTATTTAGGCATC 59.992 52.174 0.00 0.00 0.00 3.91
4846 5241 3.251484 CCCCCTCTCTATTTAGGCATCA 58.749 50.000 0.00 0.00 0.00 3.07
4847 5242 3.652869 CCCCCTCTCTATTTAGGCATCAA 59.347 47.826 0.00 0.00 0.00 2.57
4848 5243 4.290722 CCCCCTCTCTATTTAGGCATCAAT 59.709 45.833 0.00 0.00 0.00 2.57
4849 5244 5.251764 CCCCTCTCTATTTAGGCATCAATG 58.748 45.833 0.00 0.00 0.00 2.82
4850 5245 5.013495 CCCCTCTCTATTTAGGCATCAATGA 59.987 44.000 0.00 0.00 0.00 2.57
4851 5246 6.466326 CCCCTCTCTATTTAGGCATCAATGAA 60.466 42.308 0.00 0.00 0.00 2.57
4852 5247 7.173722 CCCTCTCTATTTAGGCATCAATGAAT 58.826 38.462 0.00 0.00 0.00 2.57
4853 5248 7.336427 CCCTCTCTATTTAGGCATCAATGAATC 59.664 40.741 0.00 0.00 0.00 2.52
4854 5249 7.064371 CCTCTCTATTTAGGCATCAATGAATCG 59.936 40.741 0.00 0.00 0.00 3.34
4855 5250 7.445121 TCTCTATTTAGGCATCAATGAATCGT 58.555 34.615 0.00 0.00 0.00 3.73
4856 5251 8.585018 TCTCTATTTAGGCATCAATGAATCGTA 58.415 33.333 0.00 0.00 0.00 3.43
4857 5252 9.376075 CTCTATTTAGGCATCAATGAATCGTAT 57.624 33.333 0.00 0.00 0.00 3.06
4858 5253 9.725019 TCTATTTAGGCATCAATGAATCGTATT 57.275 29.630 0.00 0.00 0.00 1.89
4864 5259 7.651808 AGGCATCAATGAATCGTATTTTTAGG 58.348 34.615 0.00 0.00 0.00 2.69
4865 5260 7.285401 AGGCATCAATGAATCGTATTTTTAGGT 59.715 33.333 0.00 0.00 0.00 3.08
4866 5261 7.920682 GGCATCAATGAATCGTATTTTTAGGTT 59.079 33.333 0.00 0.00 0.00 3.50
4867 5262 9.301153 GCATCAATGAATCGTATTTTTAGGTTT 57.699 29.630 0.00 0.00 0.00 3.27
4869 5264 9.716507 ATCAATGAATCGTATTTTTAGGTTTCG 57.283 29.630 0.00 0.00 0.00 3.46
4870 5265 8.723311 TCAATGAATCGTATTTTTAGGTTTCGT 58.277 29.630 0.00 0.00 0.00 3.85
4871 5266 9.976255 CAATGAATCGTATTTTTAGGTTTCGTA 57.024 29.630 0.00 0.00 0.00 3.43
4878 5273 9.596677 TCGTATTTTTAGGTTTCGTAAATTGTG 57.403 29.630 0.00 0.00 0.00 3.33
4879 5274 9.384682 CGTATTTTTAGGTTTCGTAAATTGTGT 57.615 29.630 0.00 0.00 0.00 3.72
4888 5283 8.842280 AGGTTTCGTAAATTGTGTCTTATTTCA 58.158 29.630 0.00 0.00 0.00 2.69
4889 5284 9.620660 GGTTTCGTAAATTGTGTCTTATTTCAT 57.379 29.630 0.00 0.00 0.00 2.57
4892 5287 9.961266 TTCGTAAATTGTGTCTTATTTCATACG 57.039 29.630 0.00 0.00 30.42 3.06
4893 5288 9.142515 TCGTAAATTGTGTCTTATTTCATACGT 57.857 29.630 0.00 0.00 30.87 3.57
5045 5440 9.457436 ACGATATTTGTGGTCTTATAACCTTTT 57.543 29.630 0.00 0.00 40.20 2.27
5148 5543 6.648725 AAAGTGATCGAAAGTTTATCTCGG 57.351 37.500 0.00 0.00 33.44 4.63
5149 5544 4.683832 AGTGATCGAAAGTTTATCTCGGG 58.316 43.478 0.00 0.00 33.44 5.14
5150 5545 4.159879 AGTGATCGAAAGTTTATCTCGGGT 59.840 41.667 0.00 0.00 33.44 5.28
5151 5546 4.267928 GTGATCGAAAGTTTATCTCGGGTG 59.732 45.833 0.00 0.00 33.44 4.61
5152 5547 4.158949 TGATCGAAAGTTTATCTCGGGTGA 59.841 41.667 0.00 0.00 33.44 4.02
5153 5548 4.524316 TCGAAAGTTTATCTCGGGTGAA 57.476 40.909 0.00 0.00 33.44 3.18
5154 5549 4.491676 TCGAAAGTTTATCTCGGGTGAAG 58.508 43.478 0.00 0.00 33.44 3.02
5155 5550 4.219070 TCGAAAGTTTATCTCGGGTGAAGA 59.781 41.667 0.00 0.00 33.44 2.87
5156 5551 4.927425 CGAAAGTTTATCTCGGGTGAAGAA 59.073 41.667 0.00 0.00 0.00 2.52
5157 5552 5.581085 CGAAAGTTTATCTCGGGTGAAGAAT 59.419 40.000 0.00 0.00 0.00 2.40
5158 5553 6.755141 CGAAAGTTTATCTCGGGTGAAGAATA 59.245 38.462 0.00 0.00 0.00 1.75
5159 5554 7.277098 CGAAAGTTTATCTCGGGTGAAGAATAA 59.723 37.037 0.00 0.00 0.00 1.40
5160 5555 8.494016 AAAGTTTATCTCGGGTGAAGAATAAG 57.506 34.615 0.00 0.00 0.00 1.73
5161 5556 7.184067 AGTTTATCTCGGGTGAAGAATAAGT 57.816 36.000 0.00 0.00 0.00 2.24
5162 5557 7.621796 AGTTTATCTCGGGTGAAGAATAAGTT 58.378 34.615 0.00 0.00 0.00 2.66
5163 5558 8.755977 AGTTTATCTCGGGTGAAGAATAAGTTA 58.244 33.333 0.00 0.00 0.00 2.24
5164 5559 9.543783 GTTTATCTCGGGTGAAGAATAAGTTAT 57.456 33.333 0.00 0.00 0.00 1.89
5166 5561 9.760077 TTATCTCGGGTGAAGAATAAGTTATTC 57.240 33.333 22.80 22.80 43.77 1.75
5178 5573 7.573968 GAATAAGTTATTCTGCACCTTGGAT 57.426 36.000 22.93 0.00 41.00 3.41
5179 5574 6.949352 ATAAGTTATTCTGCACCTTGGATG 57.051 37.500 0.00 0.00 0.00 3.51
5180 5575 4.574674 AGTTATTCTGCACCTTGGATGA 57.425 40.909 0.00 0.00 0.00 2.92
5181 5576 5.121380 AGTTATTCTGCACCTTGGATGAT 57.879 39.130 0.00 0.00 0.00 2.45
5182 5577 4.885907 AGTTATTCTGCACCTTGGATGATG 59.114 41.667 0.00 0.00 0.00 3.07
5183 5578 3.657398 ATTCTGCACCTTGGATGATGA 57.343 42.857 0.00 0.00 0.00 2.92
5184 5579 3.438216 TTCTGCACCTTGGATGATGAA 57.562 42.857 0.00 0.00 0.00 2.57
5185 5580 3.657398 TCTGCACCTTGGATGATGAAT 57.343 42.857 0.00 0.00 0.00 2.57
5186 5581 4.776435 TCTGCACCTTGGATGATGAATA 57.224 40.909 0.00 0.00 0.00 1.75
5187 5582 4.711399 TCTGCACCTTGGATGATGAATAG 58.289 43.478 0.00 0.00 0.00 1.73
5188 5583 4.164796 TCTGCACCTTGGATGATGAATAGT 59.835 41.667 0.00 0.00 0.00 2.12
5189 5584 5.366477 TCTGCACCTTGGATGATGAATAGTA 59.634 40.000 0.00 0.00 0.00 1.82
5190 5585 6.000246 TGCACCTTGGATGATGAATAGTAA 58.000 37.500 0.00 0.00 0.00 2.24
5191 5586 6.604171 TGCACCTTGGATGATGAATAGTAAT 58.396 36.000 0.00 0.00 0.00 1.89
5192 5587 7.744733 TGCACCTTGGATGATGAATAGTAATA 58.255 34.615 0.00 0.00 0.00 0.98
5193 5588 8.385491 TGCACCTTGGATGATGAATAGTAATAT 58.615 33.333 0.00 0.00 0.00 1.28
5194 5589 9.236006 GCACCTTGGATGATGAATAGTAATATT 57.764 33.333 0.00 0.00 0.00 1.28
5196 5591 9.745018 ACCTTGGATGATGAATAGTAATATTGG 57.255 33.333 0.00 0.00 0.00 3.16
5197 5592 9.745018 CCTTGGATGATGAATAGTAATATTGGT 57.255 33.333 0.00 0.00 0.00 3.67
5209 5604 9.860650 AATAGTAATATTGGTAGAAATGTGGCA 57.139 29.630 0.00 0.00 0.00 4.92
5211 5606 8.169977 AGTAATATTGGTAGAAATGTGGCATG 57.830 34.615 0.00 0.00 0.00 4.06
5212 5607 6.409524 AATATTGGTAGAAATGTGGCATGG 57.590 37.500 0.00 0.00 0.00 3.66
5213 5608 3.448093 TTGGTAGAAATGTGGCATGGA 57.552 42.857 0.00 0.00 0.00 3.41
5214 5609 2.722094 TGGTAGAAATGTGGCATGGAC 58.278 47.619 0.00 0.00 0.00 4.02
5215 5610 2.040947 TGGTAGAAATGTGGCATGGACA 59.959 45.455 0.00 0.00 0.00 4.02
5216 5611 3.290710 GGTAGAAATGTGGCATGGACAT 58.709 45.455 0.00 0.00 35.49 3.06
5217 5612 3.701040 GGTAGAAATGTGGCATGGACATT 59.299 43.478 0.00 0.00 44.21 2.71
5218 5613 3.880047 AGAAATGTGGCATGGACATTG 57.120 42.857 2.29 0.00 42.04 2.82
5219 5614 3.433343 AGAAATGTGGCATGGACATTGA 58.567 40.909 2.29 0.00 42.04 2.57
5220 5615 3.446161 AGAAATGTGGCATGGACATTGAG 59.554 43.478 2.29 0.00 42.04 3.02
5221 5616 2.519771 ATGTGGCATGGACATTGAGT 57.480 45.000 0.00 0.00 29.39 3.41
5222 5617 2.291209 TGTGGCATGGACATTGAGTT 57.709 45.000 0.00 0.00 0.00 3.01
5223 5618 2.596346 TGTGGCATGGACATTGAGTTT 58.404 42.857 0.00 0.00 0.00 2.66
5224 5619 2.557924 TGTGGCATGGACATTGAGTTTC 59.442 45.455 0.00 0.00 0.00 2.78
5225 5620 2.821969 GTGGCATGGACATTGAGTTTCT 59.178 45.455 0.00 0.00 0.00 2.52
5226 5621 4.009675 GTGGCATGGACATTGAGTTTCTA 58.990 43.478 0.00 0.00 0.00 2.10
5227 5622 4.095483 GTGGCATGGACATTGAGTTTCTAG 59.905 45.833 0.00 0.00 0.00 2.43
5228 5623 4.263462 TGGCATGGACATTGAGTTTCTAGT 60.263 41.667 0.00 0.00 0.00 2.57
5229 5624 4.333926 GGCATGGACATTGAGTTTCTAGTC 59.666 45.833 0.00 0.00 0.00 2.59
5230 5625 5.181748 GCATGGACATTGAGTTTCTAGTCT 58.818 41.667 0.00 0.00 0.00 3.24
5231 5626 5.293079 GCATGGACATTGAGTTTCTAGTCTC 59.707 44.000 0.00 0.00 0.00 3.36
5232 5627 5.060662 TGGACATTGAGTTTCTAGTCTCG 57.939 43.478 0.00 0.00 33.88 4.04
5233 5628 4.765339 TGGACATTGAGTTTCTAGTCTCGA 59.235 41.667 0.00 0.00 33.88 4.04
5234 5629 5.106118 TGGACATTGAGTTTCTAGTCTCGAG 60.106 44.000 5.93 5.93 33.88 4.04
5235 5630 4.739195 ACATTGAGTTTCTAGTCTCGAGC 58.261 43.478 7.81 2.90 33.88 5.03
5236 5631 4.461081 ACATTGAGTTTCTAGTCTCGAGCT 59.539 41.667 7.81 10.92 33.88 4.09
5237 5632 4.688511 TTGAGTTTCTAGTCTCGAGCTC 57.311 45.455 7.81 2.73 33.88 4.09
5238 5633 3.676093 TGAGTTTCTAGTCTCGAGCTCA 58.324 45.455 15.40 9.18 33.88 4.26
5239 5634 3.437395 TGAGTTTCTAGTCTCGAGCTCAC 59.563 47.826 15.40 4.41 33.88 3.51
5240 5635 3.413327 AGTTTCTAGTCTCGAGCTCACA 58.587 45.455 15.40 0.00 0.00 3.58
5241 5636 4.013728 AGTTTCTAGTCTCGAGCTCACAT 58.986 43.478 15.40 0.00 0.00 3.21
5242 5637 4.101942 GTTTCTAGTCTCGAGCTCACATG 58.898 47.826 15.40 0.00 0.00 3.21
5243 5638 1.673400 TCTAGTCTCGAGCTCACATGC 59.327 52.381 15.40 0.00 0.00 4.06
5253 5648 3.832615 AGCTCACATGCTCACATATGA 57.167 42.857 10.38 0.00 37.38 2.15
5254 5649 4.146745 AGCTCACATGCTCACATATGAA 57.853 40.909 10.38 0.00 39.17 2.57
5255 5650 3.875727 AGCTCACATGCTCACATATGAAC 59.124 43.478 10.38 0.00 39.17 3.18
5256 5651 3.624410 GCTCACATGCTCACATATGAACA 59.376 43.478 10.38 2.11 39.17 3.18
5257 5652 4.260661 GCTCACATGCTCACATATGAACAG 60.261 45.833 10.38 3.01 39.17 3.16
5258 5653 4.835678 TCACATGCTCACATATGAACAGT 58.164 39.130 10.38 0.00 36.78 3.55
5259 5654 5.976458 TCACATGCTCACATATGAACAGTA 58.024 37.500 10.38 1.90 36.78 2.74
5260 5655 6.405538 TCACATGCTCACATATGAACAGTAA 58.594 36.000 10.38 0.00 36.78 2.24
5261 5656 6.878389 TCACATGCTCACATATGAACAGTAAA 59.122 34.615 10.38 0.00 36.78 2.01
5262 5657 7.390162 TCACATGCTCACATATGAACAGTAAAA 59.610 33.333 10.38 0.00 36.78 1.52
5263 5658 7.695201 CACATGCTCACATATGAACAGTAAAAG 59.305 37.037 10.38 0.21 34.48 2.27
5264 5659 6.182039 TGCTCACATATGAACAGTAAAAGC 57.818 37.500 10.38 5.19 33.30 3.51
5265 5660 5.939883 TGCTCACATATGAACAGTAAAAGCT 59.060 36.000 10.38 0.00 33.30 3.74
5266 5661 6.128200 TGCTCACATATGAACAGTAAAAGCTG 60.128 38.462 10.38 0.00 41.92 4.24
5267 5662 6.092670 GCTCACATATGAACAGTAAAAGCTGA 59.907 38.462 10.38 0.00 39.62 4.26
5268 5663 7.361201 GCTCACATATGAACAGTAAAAGCTGAA 60.361 37.037 10.38 0.00 39.62 3.02
5269 5664 8.032952 TCACATATGAACAGTAAAAGCTGAAG 57.967 34.615 10.38 0.00 39.62 3.02
5270 5665 7.119699 TCACATATGAACAGTAAAAGCTGAAGG 59.880 37.037 10.38 0.00 39.62 3.46
5271 5666 6.375455 ACATATGAACAGTAAAAGCTGAAGGG 59.625 38.462 10.38 0.00 39.62 3.95
5272 5667 3.486383 TGAACAGTAAAAGCTGAAGGGG 58.514 45.455 0.00 0.00 39.62 4.79
5273 5668 2.586648 ACAGTAAAAGCTGAAGGGGG 57.413 50.000 0.00 0.00 39.62 5.40
5339 5734 9.467258 AATGTAAACATTGATTGACTGTTTCAG 57.533 29.630 7.52 0.00 44.22 3.02
5340 5735 6.917477 TGTAAACATTGATTGACTGTTTCAGC 59.083 34.615 3.41 0.00 41.01 4.26
5341 5736 5.779529 AACATTGATTGACTGTTTCAGCT 57.220 34.783 0.00 0.00 34.94 4.24
5342 5737 5.117355 ACATTGATTGACTGTTTCAGCTG 57.883 39.130 7.63 7.63 34.94 4.24
5343 5738 3.631145 TTGATTGACTGTTTCAGCTGC 57.369 42.857 9.47 0.00 34.94 5.25
5344 5739 1.532437 TGATTGACTGTTTCAGCTGCG 59.468 47.619 9.47 0.00 34.94 5.18
5345 5740 1.532868 GATTGACTGTTTCAGCTGCGT 59.467 47.619 9.47 0.36 34.94 5.24
5346 5741 0.657312 TTGACTGTTTCAGCTGCGTG 59.343 50.000 9.47 0.00 34.94 5.34
5347 5742 1.082496 GACTGTTTCAGCTGCGTGC 60.082 57.895 9.47 0.00 43.29 5.34
5348 5743 1.775039 GACTGTTTCAGCTGCGTGCA 61.775 55.000 9.47 4.47 45.94 4.57
5349 5744 1.356270 CTGTTTCAGCTGCGTGCAA 59.644 52.632 9.47 0.00 45.94 4.08
5350 5745 0.659417 CTGTTTCAGCTGCGTGCAAG 60.659 55.000 9.47 0.00 45.94 4.01
5351 5746 1.094650 TGTTTCAGCTGCGTGCAAGA 61.095 50.000 9.47 0.00 45.94 3.02
5352 5747 0.029300 GTTTCAGCTGCGTGCAAGAA 59.971 50.000 9.47 0.00 45.94 2.52
5353 5748 0.953727 TTTCAGCTGCGTGCAAGAAT 59.046 45.000 9.47 0.00 45.94 2.40
5354 5749 0.953727 TTCAGCTGCGTGCAAGAATT 59.046 45.000 9.47 0.00 45.94 2.17
5355 5750 0.953727 TCAGCTGCGTGCAAGAATTT 59.046 45.000 9.47 0.00 45.94 1.82
5356 5751 1.057636 CAGCTGCGTGCAAGAATTTG 58.942 50.000 0.00 0.00 45.94 2.32
5357 5752 0.670162 AGCTGCGTGCAAGAATTTGT 59.330 45.000 2.99 0.00 45.94 2.83
5358 5753 0.780002 GCTGCGTGCAAGAATTTGTG 59.220 50.000 2.99 0.00 42.31 3.33
5359 5754 1.600164 GCTGCGTGCAAGAATTTGTGA 60.600 47.619 2.99 0.00 42.31 3.58
5360 5755 2.923605 GCTGCGTGCAAGAATTTGTGAT 60.924 45.455 2.99 0.00 42.31 3.06
5361 5756 2.659757 CTGCGTGCAAGAATTTGTGATG 59.340 45.455 2.99 0.00 36.65 3.07
5362 5757 2.034432 TGCGTGCAAGAATTTGTGATGT 59.966 40.909 2.99 0.00 36.65 3.06
5363 5758 3.251972 TGCGTGCAAGAATTTGTGATGTA 59.748 39.130 2.99 0.00 36.65 2.29
5364 5759 4.225984 GCGTGCAAGAATTTGTGATGTAA 58.774 39.130 2.99 0.00 36.65 2.41
5365 5760 4.858692 GCGTGCAAGAATTTGTGATGTAAT 59.141 37.500 2.99 0.00 36.65 1.89
5366 5761 5.220080 GCGTGCAAGAATTTGTGATGTAATG 60.220 40.000 2.99 0.00 36.65 1.90
5367 5762 5.286797 CGTGCAAGAATTTGTGATGTAATGG 59.713 40.000 0.00 0.00 36.65 3.16
5368 5763 5.062558 GTGCAAGAATTTGTGATGTAATGGC 59.937 40.000 0.00 0.00 36.65 4.40
5369 5764 5.170021 GCAAGAATTTGTGATGTAATGGCA 58.830 37.500 0.00 0.00 36.65 4.92
5370 5765 5.813672 GCAAGAATTTGTGATGTAATGGCAT 59.186 36.000 0.00 0.00 36.65 4.40
5371 5766 6.314400 GCAAGAATTTGTGATGTAATGGCATT 59.686 34.615 18.01 18.01 36.65 3.56
5372 5767 7.148373 GCAAGAATTTGTGATGTAATGGCATTT 60.148 33.333 19.21 0.00 36.65 2.32
5373 5768 7.837202 AGAATTTGTGATGTAATGGCATTTG 57.163 32.000 19.21 0.00 0.00 2.32
5374 5769 7.388437 AGAATTTGTGATGTAATGGCATTTGT 58.612 30.769 19.21 4.74 0.00 2.83
5375 5770 6.971527 ATTTGTGATGTAATGGCATTTGTG 57.028 33.333 19.21 0.00 0.00 3.33
5376 5771 4.453177 TGTGATGTAATGGCATTTGTGG 57.547 40.909 19.21 0.00 0.00 4.17
5377 5772 4.085009 TGTGATGTAATGGCATTTGTGGA 58.915 39.130 19.21 0.00 0.00 4.02
5378 5773 4.158209 TGTGATGTAATGGCATTTGTGGAG 59.842 41.667 19.21 0.00 0.00 3.86
5379 5774 3.700539 TGATGTAATGGCATTTGTGGAGG 59.299 43.478 19.21 0.00 0.00 4.30
5380 5775 3.168035 TGTAATGGCATTTGTGGAGGT 57.832 42.857 19.21 0.00 0.00 3.85
5381 5776 3.088532 TGTAATGGCATTTGTGGAGGTC 58.911 45.455 19.21 0.00 0.00 3.85
5382 5777 2.610438 AATGGCATTTGTGGAGGTCT 57.390 45.000 6.96 0.00 0.00 3.85
5383 5778 1.843368 ATGGCATTTGTGGAGGTCTG 58.157 50.000 0.00 0.00 0.00 3.51
5384 5779 0.251297 TGGCATTTGTGGAGGTCTGG 60.251 55.000 0.00 0.00 0.00 3.86
5385 5780 0.967380 GGCATTTGTGGAGGTCTGGG 60.967 60.000 0.00 0.00 0.00 4.45
5386 5781 1.598701 GCATTTGTGGAGGTCTGGGC 61.599 60.000 0.00 0.00 0.00 5.36
5387 5782 0.038744 CATTTGTGGAGGTCTGGGCT 59.961 55.000 0.00 0.00 0.00 5.19
5388 5783 1.281867 CATTTGTGGAGGTCTGGGCTA 59.718 52.381 0.00 0.00 0.00 3.93
5389 5784 1.668826 TTTGTGGAGGTCTGGGCTAT 58.331 50.000 0.00 0.00 0.00 2.97
5390 5785 1.668826 TTGTGGAGGTCTGGGCTATT 58.331 50.000 0.00 0.00 0.00 1.73
5391 5786 2.561209 TGTGGAGGTCTGGGCTATTA 57.439 50.000 0.00 0.00 0.00 0.98
5392 5787 2.840511 TGTGGAGGTCTGGGCTATTAA 58.159 47.619 0.00 0.00 0.00 1.40
5393 5788 3.186283 TGTGGAGGTCTGGGCTATTAAA 58.814 45.455 0.00 0.00 0.00 1.52
5394 5789 3.589735 TGTGGAGGTCTGGGCTATTAAAA 59.410 43.478 0.00 0.00 0.00 1.52
5395 5790 3.945921 GTGGAGGTCTGGGCTATTAAAAC 59.054 47.826 0.00 0.00 0.00 2.43
5396 5791 3.589735 TGGAGGTCTGGGCTATTAAAACA 59.410 43.478 0.00 0.00 0.00 2.83
5397 5792 4.200092 GGAGGTCTGGGCTATTAAAACAG 58.800 47.826 0.00 0.00 0.00 3.16
5398 5793 4.080526 GGAGGTCTGGGCTATTAAAACAGA 60.081 45.833 0.00 0.00 35.97 3.41
5399 5794 5.497474 GAGGTCTGGGCTATTAAAACAGAA 58.503 41.667 0.00 0.00 39.60 3.02
5400 5795 6.079712 AGGTCTGGGCTATTAAAACAGAAT 57.920 37.500 0.00 0.00 39.60 2.40
5401 5796 6.122964 AGGTCTGGGCTATTAAAACAGAATC 58.877 40.000 0.00 0.00 39.60 2.52
5402 5797 6.069381 AGGTCTGGGCTATTAAAACAGAATCT 60.069 38.462 0.00 0.00 39.60 2.40
5403 5798 7.127339 AGGTCTGGGCTATTAAAACAGAATCTA 59.873 37.037 0.00 0.00 39.60 1.98
5404 5799 7.939588 GGTCTGGGCTATTAAAACAGAATCTAT 59.060 37.037 0.00 0.00 39.60 1.98
5405 5800 9.998106 GTCTGGGCTATTAAAACAGAATCTATA 57.002 33.333 0.00 0.00 39.60 1.31
5406 5801 9.998106 TCTGGGCTATTAAAACAGAATCTATAC 57.002 33.333 0.00 0.00 35.45 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.808945 TCAAGTTCTACGACGGACCTC 59.191 52.381 0.00 0.00 0.00 3.85
18 19 1.901591 TCAAGTTCTACGACGGACCT 58.098 50.000 0.00 0.00 0.00 3.85
19 20 2.712057 TTCAAGTTCTACGACGGACC 57.288 50.000 0.00 0.00 0.00 4.46
20 21 3.829948 TCATTCAAGTTCTACGACGGAC 58.170 45.455 0.00 0.00 0.00 4.79
21 22 4.232221 GTTCATTCAAGTTCTACGACGGA 58.768 43.478 0.00 0.00 0.00 4.69
22 23 3.985279 TGTTCATTCAAGTTCTACGACGG 59.015 43.478 0.00 0.00 0.00 4.79
55 56 4.791069 GGAGGGGTGGGCTCGGTA 62.791 72.222 0.00 0.00 0.00 4.02
80 81 4.796495 GTGGGATCGGCGGGCTTT 62.796 66.667 7.21 0.00 0.00 3.51
131 132 0.106369 ATAGGGTGACACCGGATCGA 60.106 55.000 18.40 1.34 39.83 3.59
141 142 3.495100 GGTGATGATGGTGATAGGGTGAC 60.495 52.174 0.00 0.00 0.00 3.67
142 143 2.705658 GGTGATGATGGTGATAGGGTGA 59.294 50.000 0.00 0.00 0.00 4.02
153 154 1.970640 TCGGTGATAGGGTGATGATGG 59.029 52.381 0.00 0.00 0.00 3.51
162 163 0.686789 TGCATGGATCGGTGATAGGG 59.313 55.000 0.00 0.00 0.00 3.53
166 167 0.179012 TGCATGCATGGATCGGTGAT 60.179 50.000 27.34 0.00 0.00 3.06
167 168 0.394080 TTGCATGCATGGATCGGTGA 60.394 50.000 27.34 6.36 0.00 4.02
211 212 3.596066 TTGACAGAGAGCAGCGGCC 62.596 63.158 4.82 0.00 42.56 6.13
228 229 2.027561 TGCTTCGTACCACAGGCTATTT 60.028 45.455 0.00 0.00 0.00 1.40
229 230 1.553248 TGCTTCGTACCACAGGCTATT 59.447 47.619 0.00 0.00 0.00 1.73
534 561 4.059459 GACAGCAACCGCACGTCG 62.059 66.667 0.00 0.00 42.27 5.12
535 562 2.661866 AGACAGCAACCGCACGTC 60.662 61.111 0.00 0.00 42.27 4.34
666 693 0.385390 GCCGGCATAAATTCCTGGTG 59.615 55.000 24.80 0.00 0.00 4.17
695 722 2.031919 ATGCACGTTTGGGCGAGA 59.968 55.556 0.00 0.00 35.59 4.04
696 723 2.176546 CATGCACGTTTGGGCGAG 59.823 61.111 0.00 0.00 35.59 5.03
697 724 3.361158 CCATGCACGTTTGGGCGA 61.361 61.111 0.00 0.00 35.59 5.54
743 770 1.349259 GCTTGTACTACGTGGCACCG 61.349 60.000 12.86 9.88 0.00 4.94
762 789 9.114965 GAAATGAATGAATATTTCTGCATCGAG 57.885 33.333 0.00 0.00 39.20 4.04
830 857 0.539438 AAATGAAAGGCTCCGGTGCA 60.539 50.000 28.14 9.30 34.04 4.57
831 858 0.109132 CAAATGAAAGGCTCCGGTGC 60.109 55.000 20.16 20.16 0.00 5.01
832 859 0.109132 GCAAATGAAAGGCTCCGGTG 60.109 55.000 0.00 0.00 0.00 4.94
833 860 0.539438 TGCAAATGAAAGGCTCCGGT 60.539 50.000 0.00 0.00 0.00 5.28
834 861 0.819582 ATGCAAATGAAAGGCTCCGG 59.180 50.000 0.00 0.00 0.00 5.14
835 862 2.660189 AATGCAAATGAAAGGCTCCG 57.340 45.000 0.00 0.00 0.00 4.63
837 864 4.572909 AGGAAAATGCAAATGAAAGGCTC 58.427 39.130 0.00 0.00 0.00 4.70
838 865 4.628963 AGGAAAATGCAAATGAAAGGCT 57.371 36.364 0.00 0.00 0.00 4.58
839 866 5.454520 CAAAGGAAAATGCAAATGAAAGGC 58.545 37.500 0.00 0.00 0.00 4.35
841 885 5.141568 CGCAAAGGAAAATGCAAATGAAAG 58.858 37.500 0.00 0.00 42.68 2.62
847 891 3.170791 TCACGCAAAGGAAAATGCAAA 57.829 38.095 0.00 0.00 42.68 3.68
898 943 9.483916 CAGGTATATATAAACGATTGTTGGTCA 57.516 33.333 0.00 0.00 38.62 4.02
899 944 8.440833 GCAGGTATATATAAACGATTGTTGGTC 58.559 37.037 0.00 0.00 38.62 4.02
902 947 8.234887 TCGCAGGTATATATAAACGATTGTTG 57.765 34.615 0.00 0.00 38.62 3.33
904 949 7.010183 GCATCGCAGGTATATATAAACGATTGT 59.990 37.037 13.48 0.00 36.94 2.71
906 951 7.039270 TGCATCGCAGGTATATATAAACGATT 58.961 34.615 13.48 0.00 36.94 3.34
907 952 6.569780 TGCATCGCAGGTATATATAAACGAT 58.430 36.000 11.60 11.60 39.38 3.73
908 953 5.956642 TGCATCGCAGGTATATATAAACGA 58.043 37.500 8.96 8.96 33.32 3.85
940 985 3.382803 CTGCTTCTCCCCTGCTCCG 62.383 68.421 0.00 0.00 0.00 4.63
979 1037 0.949105 TTCGCTTCTCCCTTTCACGC 60.949 55.000 0.00 0.00 0.00 5.34
980 1038 1.071605 CTTCGCTTCTCCCTTTCACG 58.928 55.000 0.00 0.00 0.00 4.35
981 1039 2.457366 TCTTCGCTTCTCCCTTTCAC 57.543 50.000 0.00 0.00 0.00 3.18
982 1040 2.936993 GCATCTTCGCTTCTCCCTTTCA 60.937 50.000 0.00 0.00 0.00 2.69
983 1041 1.668237 GCATCTTCGCTTCTCCCTTTC 59.332 52.381 0.00 0.00 0.00 2.62
986 1044 0.177604 CAGCATCTTCGCTTCTCCCT 59.822 55.000 0.00 0.00 41.38 4.20
987 1045 0.813210 CCAGCATCTTCGCTTCTCCC 60.813 60.000 0.00 0.00 41.38 4.30
989 1047 0.742281 TGCCAGCATCTTCGCTTCTC 60.742 55.000 0.00 0.00 41.38 2.87
1110 1170 1.456296 ACTGCACGACGGAGTACATA 58.544 50.000 0.00 0.00 45.79 2.29
1111 1171 1.456296 TACTGCACGACGGAGTACAT 58.544 50.000 0.00 0.00 45.79 2.29
1116 1176 1.154016 CCAGTACTGCACGACGGAG 60.154 63.158 17.86 0.00 39.42 4.63
1118 1178 1.929806 TAGCCAGTACTGCACGACGG 61.930 60.000 17.86 2.97 0.00 4.79
1120 1180 0.526662 ACTAGCCAGTACTGCACGAC 59.473 55.000 17.86 3.92 31.45 4.34
1121 1181 2.118313 TACTAGCCAGTACTGCACGA 57.882 50.000 17.86 7.02 36.14 4.35
1139 1199 5.195940 AGGTAAAGATGCAGGTACGTAGTA 58.804 41.667 0.00 0.00 45.11 1.82
1141 1201 4.650754 AGGTAAAGATGCAGGTACGTAG 57.349 45.455 0.00 0.00 0.00 3.51
1142 1202 5.195940 AGTAGGTAAAGATGCAGGTACGTA 58.804 41.667 0.00 0.00 0.00 3.57
1143 1203 4.021916 AGTAGGTAAAGATGCAGGTACGT 58.978 43.478 0.00 0.00 0.00 3.57
1144 1204 4.097437 TGAGTAGGTAAAGATGCAGGTACG 59.903 45.833 0.00 0.00 0.00 3.67
1145 1205 5.127356 AGTGAGTAGGTAAAGATGCAGGTAC 59.873 44.000 0.00 0.00 0.00 3.34
1146 1206 5.269991 AGTGAGTAGGTAAAGATGCAGGTA 58.730 41.667 0.00 0.00 0.00 3.08
1147 1207 4.097418 AGTGAGTAGGTAAAGATGCAGGT 58.903 43.478 0.00 0.00 0.00 4.00
1148 1208 4.744795 AGTGAGTAGGTAAAGATGCAGG 57.255 45.455 0.00 0.00 0.00 4.85
1182 1242 4.176271 GAGTTTATTTGTTGGGATGCAGC 58.824 43.478 0.00 0.00 0.00 5.25
1232 1292 0.882042 CATGGTGGGCGCTAGCTTAG 60.882 60.000 13.93 0.00 44.37 2.18
1233 1293 1.146041 CATGGTGGGCGCTAGCTTA 59.854 57.895 13.93 0.00 44.37 3.09
1244 1304 0.971386 AAAAGCAGAAGCCATGGTGG 59.029 50.000 14.67 0.00 43.56 4.61
1247 1307 2.929592 GCAGAAAAAGCAGAAGCCATGG 60.930 50.000 7.63 7.63 43.56 3.66
1273 1333 0.801251 ACGTACGTGGTACTCTCTGC 59.199 55.000 22.14 0.00 36.93 4.26
1285 1360 4.359971 TCAATGCATGTAGTACGTACGT 57.640 40.909 25.98 25.98 33.87 3.57
1286 1361 4.973663 TGATCAATGCATGTAGTACGTACG 59.026 41.667 19.49 15.01 33.87 3.67
1287 1362 5.977725 ACTGATCAATGCATGTAGTACGTAC 59.022 40.000 18.10 18.10 0.00 3.67
1288 1363 6.144078 ACTGATCAATGCATGTAGTACGTA 57.856 37.500 0.00 0.00 0.00 3.57
1355 1430 3.568007 TCTTTTTCAAATGTCAGGGACGG 59.432 43.478 0.00 0.00 34.95 4.79
1356 1431 4.829064 TCTTTTTCAAATGTCAGGGACG 57.171 40.909 0.00 0.00 34.95 4.79
1357 1432 5.748630 GTGTTCTTTTTCAAATGTCAGGGAC 59.251 40.000 0.00 0.00 0.00 4.46
1393 1471 7.040473 AGTACTCCTATGTGTAGTGTATTGC 57.960 40.000 0.00 0.00 0.00 3.56
1396 1474 8.270030 TGTGTAGTACTCCTATGTGTAGTGTAT 58.730 37.037 0.00 0.00 0.00 2.29
1414 1492 4.525100 TGGAATGCTGTGTACTGTGTAGTA 59.475 41.667 0.00 0.00 38.36 1.82
1415 1493 3.323691 TGGAATGCTGTGTACTGTGTAGT 59.676 43.478 0.00 0.00 40.99 2.73
1416 1494 3.925379 TGGAATGCTGTGTACTGTGTAG 58.075 45.455 0.00 0.00 0.00 2.74
1417 1495 3.323691 ACTGGAATGCTGTGTACTGTGTA 59.676 43.478 0.00 0.00 0.00 2.90
1418 1496 2.104792 ACTGGAATGCTGTGTACTGTGT 59.895 45.455 0.00 0.00 0.00 3.72
1419 1497 2.738846 GACTGGAATGCTGTGTACTGTG 59.261 50.000 0.00 0.00 0.00 3.66
1420 1498 2.634940 AGACTGGAATGCTGTGTACTGT 59.365 45.455 0.00 0.00 0.00 3.55
1421 1499 3.325293 AGACTGGAATGCTGTGTACTG 57.675 47.619 0.00 0.00 0.00 2.74
1422 1500 4.090090 ACTAGACTGGAATGCTGTGTACT 58.910 43.478 0.00 0.00 0.00 2.73
1423 1501 4.457834 ACTAGACTGGAATGCTGTGTAC 57.542 45.455 0.00 0.00 0.00 2.90
1448 1539 2.225491 CGTTCTCCCGCTTTTCATTTGA 59.775 45.455 0.00 0.00 0.00 2.69
1471 1562 1.405821 CTACTAGCTCCCACTTGGACG 59.594 57.143 0.00 0.00 38.61 4.79
1505 1596 1.896220 TGGAAATGTGAGGACACTGC 58.104 50.000 0.00 0.00 46.07 4.40
1531 1622 1.142060 TGACCGACTTTGTGACCCAAT 59.858 47.619 0.00 0.00 31.81 3.16
1574 1665 3.556004 GGGGATCGATCTAGGAAAAGCAG 60.556 52.174 23.96 0.00 0.00 4.24
1643 1737 5.674933 ACAAAAGAGACGAGAACAAATCC 57.325 39.130 0.00 0.00 0.00 3.01
1658 1752 2.604139 GGGAATGTGGGGAACAAAAGA 58.396 47.619 0.00 0.00 43.61 2.52
1705 1799 1.952133 CGGACGGACGAACAAGCAA 60.952 57.895 0.00 0.00 35.47 3.91
1706 1800 2.355363 CGGACGGACGAACAAGCA 60.355 61.111 0.00 0.00 35.47 3.91
1707 1801 2.355481 ACGGACGGACGAACAAGC 60.355 61.111 8.01 0.00 37.61 4.01
1708 1802 1.731969 GGACGGACGGACGAACAAG 60.732 63.158 8.01 0.00 37.61 3.16
1714 1808 3.060615 AAGGAGGACGGACGGACG 61.061 66.667 0.00 0.00 40.31 4.79
1717 1811 3.358076 GAGCAAGGAGGACGGACGG 62.358 68.421 0.00 0.00 0.00 4.79
1729 1823 2.939103 CCATACCTTTCTTCGGAGCAAG 59.061 50.000 0.00 0.00 0.00 4.01
1737 1831 2.096013 GTGCTTCGCCATACCTTTCTTC 59.904 50.000 0.00 0.00 0.00 2.87
1875 1975 8.661257 CACACACATTTGGAACTCGTATTATAA 58.339 33.333 0.00 0.00 0.00 0.98
1949 2049 1.275291 GAAGGACCACGGAATGAGTGA 59.725 52.381 0.00 0.00 41.83 3.41
1969 2074 4.738998 TTGCGACCAGGCCCATGG 62.739 66.667 9.48 9.48 46.47 3.66
1977 2082 2.512515 GCCTAGCCTTGCGACCAG 60.513 66.667 0.00 0.00 0.00 4.00
1981 2086 1.219124 CTGAAGCCTAGCCTTGCGA 59.781 57.895 0.00 0.00 0.00 5.10
1982 2087 0.809241 CTCTGAAGCCTAGCCTTGCG 60.809 60.000 0.00 0.00 0.00 4.85
1983 2088 0.251634 ACTCTGAAGCCTAGCCTTGC 59.748 55.000 0.00 0.00 0.00 4.01
1984 2089 2.777832 AACTCTGAAGCCTAGCCTTG 57.222 50.000 0.00 0.00 0.00 3.61
1985 2090 2.769095 CCTAACTCTGAAGCCTAGCCTT 59.231 50.000 0.00 0.00 0.00 4.35
1986 2091 2.393646 CCTAACTCTGAAGCCTAGCCT 58.606 52.381 0.00 0.00 0.00 4.58
1987 2092 1.202592 GCCTAACTCTGAAGCCTAGCC 60.203 57.143 0.00 0.00 0.00 3.93
1988 2093 1.202592 GGCCTAACTCTGAAGCCTAGC 60.203 57.143 0.00 0.00 40.57 3.42
1989 2094 1.414550 GGGCCTAACTCTGAAGCCTAG 59.585 57.143 0.84 0.00 43.36 3.02
1990 2095 1.497161 GGGCCTAACTCTGAAGCCTA 58.503 55.000 0.84 0.00 43.36 3.93
1991 2096 1.617947 CGGGCCTAACTCTGAAGCCT 61.618 60.000 0.84 0.00 43.36 4.58
1992 2097 1.153349 CGGGCCTAACTCTGAAGCC 60.153 63.158 0.84 0.00 43.09 4.35
1993 2098 1.153349 CCGGGCCTAACTCTGAAGC 60.153 63.158 0.84 0.00 0.00 3.86
1994 2099 1.153349 GCCGGGCCTAACTCTGAAG 60.153 63.158 8.12 0.00 0.00 3.02
1995 2100 2.666098 GGCCGGGCCTAACTCTGAA 61.666 63.158 30.86 0.00 46.69 3.02
1996 2101 3.081409 GGCCGGGCCTAACTCTGA 61.081 66.667 30.86 0.00 46.69 3.27
2045 2150 3.553715 GCATGATAACGCAGAGAGGATGA 60.554 47.826 0.00 0.00 0.00 2.92
2046 2151 2.735663 GCATGATAACGCAGAGAGGATG 59.264 50.000 0.00 0.00 0.00 3.51
2047 2152 2.289320 GGCATGATAACGCAGAGAGGAT 60.289 50.000 0.00 0.00 0.00 3.24
2048 2153 1.069204 GGCATGATAACGCAGAGAGGA 59.931 52.381 0.00 0.00 0.00 3.71
2049 2154 1.202568 TGGCATGATAACGCAGAGAGG 60.203 52.381 0.00 0.00 0.00 3.69
2050 2155 1.863454 GTGGCATGATAACGCAGAGAG 59.137 52.381 0.00 0.00 0.00 3.20
2058 2163 0.468226 TCGAGGGGTGGCATGATAAC 59.532 55.000 0.00 0.00 0.00 1.89
2067 2204 0.036671 GGTAAACACTCGAGGGGTGG 60.037 60.000 20.91 4.27 38.83 4.61
2152 2289 1.573829 ATGCCGTGTGTTGCCTAACG 61.574 55.000 0.00 0.00 39.71 3.18
2153 2290 0.109781 CATGCCGTGTGTTGCCTAAC 60.110 55.000 0.00 0.00 37.32 2.34
2157 2294 2.768503 AATGCATGCCGTGTGTTGCC 62.769 55.000 16.68 0.00 34.20 4.52
2191 2328 0.250209 ACCGATCATGATCAGCCAGC 60.250 55.000 30.13 7.28 37.69 4.85
2210 2347 0.394938 TACTCCAAGACAAAGCGGCA 59.605 50.000 1.45 0.00 0.00 5.69
2211 2348 1.079503 CTACTCCAAGACAAAGCGGC 58.920 55.000 0.00 0.00 0.00 6.53
2215 2352 5.094134 GCGTACTACTACTCCAAGACAAAG 58.906 45.833 0.00 0.00 0.00 2.77
2221 2358 4.413087 CACTTGCGTACTACTACTCCAAG 58.587 47.826 0.00 0.00 36.69 3.61
2364 2510 5.735285 AGTGGTAGTAGGAAACTAACCAC 57.265 43.478 15.80 15.80 46.32 4.16
2383 2529 3.994392 AGATGCCGTTGTTGTAACTAGTG 59.006 43.478 0.00 0.00 0.00 2.74
2397 2543 4.134563 GGGTGTTTAATGATAGATGCCGT 58.865 43.478 0.00 0.00 0.00 5.68
2398 2544 3.186409 CGGGTGTTTAATGATAGATGCCG 59.814 47.826 0.00 0.00 0.00 5.69
2399 2545 3.058224 GCGGGTGTTTAATGATAGATGCC 60.058 47.826 0.00 0.00 0.00 4.40
2450 2596 3.317150 CCTACTGCGCGATAATTCATCA 58.683 45.455 12.10 0.00 32.71 3.07
2451 2597 2.092838 GCCTACTGCGCGATAATTCATC 59.907 50.000 12.10 0.00 0.00 2.92
2452 2598 2.069273 GCCTACTGCGCGATAATTCAT 58.931 47.619 12.10 0.00 0.00 2.57
2467 2613 2.231215 AGCATCAAGATCGTGCCTAC 57.769 50.000 3.49 0.00 39.62 3.18
2473 2619 3.379240 CGAGATCAAGCATCAAGATCGT 58.621 45.455 0.00 0.00 42.21 3.73
2502 2648 4.965200 AGGTCTAGAATGTGCCCTAATC 57.035 45.455 0.00 0.00 0.00 1.75
2616 2766 3.077359 GGCATGGTATCACCTAAGCATC 58.923 50.000 0.00 0.00 39.58 3.91
2636 2786 1.752694 CTACCACATTTGCCGGGGG 60.753 63.158 2.18 0.00 0.00 5.40
2638 2788 1.312371 CCACTACCACATTTGCCGGG 61.312 60.000 2.18 0.00 0.00 5.73
2639 2789 0.608035 ACCACTACCACATTTGCCGG 60.608 55.000 0.00 0.00 0.00 6.13
2764 3060 3.297830 TCACCAAGTACATCAGTGTCG 57.702 47.619 0.00 0.00 39.77 4.35
2839 3141 2.356673 GGACGAAAGGAACGCCGT 60.357 61.111 0.00 0.00 39.96 5.68
2908 3270 7.573469 GCATATAGTACTAGAGAAGGGAACGTG 60.573 44.444 8.85 0.00 0.00 4.49
3001 3370 0.900421 TCAGTCAGCCAGATCACCAG 59.100 55.000 0.00 0.00 0.00 4.00
3012 3385 2.183046 GGAGCTCCGTCAGTCAGC 59.817 66.667 19.06 0.00 0.00 4.26
3112 3485 1.901464 GAAGCGGTTGCCCCTGAAA 60.901 57.895 3.70 0.00 44.31 2.69
3250 3623 3.758172 GGCATGTCCCACGTTGTT 58.242 55.556 0.00 0.00 0.00 2.83
3349 3722 0.028242 CCTCCTCATCGTCTTCGTCG 59.972 60.000 0.00 0.00 38.33 5.12
3535 3911 6.095300 AGTTCATCACTATCACTCAGTCTCTG 59.905 42.308 0.00 0.00 31.97 3.35
3551 3927 4.754372 TGTTGCTTCATCAGTTCATCAC 57.246 40.909 0.00 0.00 0.00 3.06
3779 4155 4.439153 CCACGGTTTCAAATCATGATCAGG 60.439 45.833 9.06 0.00 38.03 3.86
3825 4201 1.367840 GGCGCGGGAGTAGAATGAT 59.632 57.895 8.83 0.00 0.00 2.45
4147 4523 4.767255 CTGCTCCACCCACTCCGC 62.767 72.222 0.00 0.00 0.00 5.54
4310 4686 3.702048 ACCACACCATCGGTCGGG 61.702 66.667 3.76 1.61 31.02 5.14
4425 4802 4.427661 AGTGTGCCTCGCTCGCTC 62.428 66.667 0.00 0.00 38.25 5.03
4436 4813 0.040603 GCTGCTTCAGTTCAGTGTGC 60.041 55.000 0.00 0.00 33.43 4.57
4495 4872 1.209747 CACTCTAACCTACAAGGCCCC 59.790 57.143 0.00 0.00 39.63 5.80
4499 4876 4.466370 TCACCATCACTCTAACCTACAAGG 59.534 45.833 0.00 0.00 42.49 3.61
4502 4879 4.405680 CCATCACCATCACTCTAACCTACA 59.594 45.833 0.00 0.00 0.00 2.74
4569 4949 0.102481 GCCGCCTCTCAAGACGAATA 59.898 55.000 0.00 0.00 0.00 1.75
4736 5125 9.897744 GTTCATGTGAGATTTAAACAGATCAAA 57.102 29.630 0.00 0.00 0.00 2.69
4739 5128 9.766277 GAAGTTCATGTGAGATTTAAACAGATC 57.234 33.333 0.00 0.00 0.00 2.75
4740 5129 9.288576 TGAAGTTCATGTGAGATTTAAACAGAT 57.711 29.630 0.08 0.00 0.00 2.90
4741 5130 8.559536 GTGAAGTTCATGTGAGATTTAAACAGA 58.440 33.333 9.18 0.00 0.00 3.41
4742 5131 8.344831 TGTGAAGTTCATGTGAGATTTAAACAG 58.655 33.333 9.18 0.00 0.00 3.16
4744 5133 8.958043 GTTGTGAAGTTCATGTGAGATTTAAAC 58.042 33.333 9.18 0.00 0.00 2.01
4745 5134 7.855409 CGTTGTGAAGTTCATGTGAGATTTAAA 59.145 33.333 9.18 0.00 0.00 1.52
4758 5153 4.936411 TGTTTCTTACCGTTGTGAAGTTCA 59.064 37.500 0.08 0.08 0.00 3.18
4766 5161 2.335316 TGCCTGTTTCTTACCGTTGT 57.665 45.000 0.00 0.00 0.00 3.32
4767 5162 3.701532 TTTGCCTGTTTCTTACCGTTG 57.298 42.857 0.00 0.00 0.00 4.10
4797 5192 7.226059 AGAATAATTATTTCTCACCCAGGGT 57.774 36.000 4.76 4.76 35.62 4.34
4798 5193 7.779798 TGAAGAATAATTATTTCTCACCCAGGG 59.220 37.037 11.92 2.85 0.00 4.45
4799 5194 8.624776 GTGAAGAATAATTATTTCTCACCCAGG 58.375 37.037 25.52 0.00 34.68 4.45
4800 5195 8.624776 GGTGAAGAATAATTATTTCTCACCCAG 58.375 37.037 33.15 0.00 43.34 4.45
4801 5196 8.519799 GGTGAAGAATAATTATTTCTCACCCA 57.480 34.615 33.15 17.30 43.34 4.51
4803 5198 7.014326 GGGGGTGAAGAATAATTATTTCTCACC 59.986 40.741 34.07 34.07 45.40 4.02
4804 5199 7.780271 AGGGGGTGAAGAATAATTATTTCTCAC 59.220 37.037 26.64 26.64 37.12 3.51
4805 5200 7.882755 AGGGGGTGAAGAATAATTATTTCTCA 58.117 34.615 11.92 13.49 0.00 3.27
4806 5201 8.221251 AGAGGGGGTGAAGAATAATTATTTCTC 58.779 37.037 11.92 11.41 0.00 2.87
4807 5202 8.119062 AGAGGGGGTGAAGAATAATTATTTCT 57.881 34.615 11.92 7.92 0.00 2.52
4808 5203 8.221251 AGAGAGGGGGTGAAGAATAATTATTTC 58.779 37.037 11.92 7.41 0.00 2.17
4809 5204 8.119062 AGAGAGGGGGTGAAGAATAATTATTT 57.881 34.615 11.92 0.00 0.00 1.40
4810 5205 7.713704 AGAGAGGGGGTGAAGAATAATTATT 57.286 36.000 10.51 10.51 0.00 1.40
4811 5206 8.997301 ATAGAGAGGGGGTGAAGAATAATTAT 57.003 34.615 0.00 0.00 0.00 1.28
4812 5207 8.814448 AATAGAGAGGGGGTGAAGAATAATTA 57.186 34.615 0.00 0.00 0.00 1.40
4813 5208 7.713704 AATAGAGAGGGGGTGAAGAATAATT 57.286 36.000 0.00 0.00 0.00 1.40
4814 5209 7.713704 AAATAGAGAGGGGGTGAAGAATAAT 57.286 36.000 0.00 0.00 0.00 1.28
4815 5210 7.292591 CCTAAATAGAGAGGGGGTGAAGAATAA 59.707 40.741 0.00 0.00 0.00 1.40
4816 5211 6.787957 CCTAAATAGAGAGGGGGTGAAGAATA 59.212 42.308 0.00 0.00 0.00 1.75
4817 5212 5.608860 CCTAAATAGAGAGGGGGTGAAGAAT 59.391 44.000 0.00 0.00 0.00 2.40
4818 5213 4.969359 CCTAAATAGAGAGGGGGTGAAGAA 59.031 45.833 0.00 0.00 0.00 2.52
4819 5214 4.557705 CCTAAATAGAGAGGGGGTGAAGA 58.442 47.826 0.00 0.00 0.00 2.87
4820 5215 3.071747 GCCTAAATAGAGAGGGGGTGAAG 59.928 52.174 0.00 0.00 33.04 3.02
4821 5216 3.046374 GCCTAAATAGAGAGGGGGTGAA 58.954 50.000 0.00 0.00 33.04 3.18
4822 5217 2.022428 TGCCTAAATAGAGAGGGGGTGA 60.022 50.000 0.00 0.00 33.04 4.02
4823 5218 2.408565 TGCCTAAATAGAGAGGGGGTG 58.591 52.381 0.00 0.00 33.04 4.61
4824 5219 2.889522 TGCCTAAATAGAGAGGGGGT 57.110 50.000 0.00 0.00 33.04 4.95
4825 5220 3.251484 TGATGCCTAAATAGAGAGGGGG 58.749 50.000 0.00 0.00 33.04 5.40
4826 5221 4.982241 TTGATGCCTAAATAGAGAGGGG 57.018 45.455 0.00 0.00 33.04 4.79
4827 5222 6.119240 TCATTGATGCCTAAATAGAGAGGG 57.881 41.667 0.00 0.00 33.04 4.30
4828 5223 7.064371 CGATTCATTGATGCCTAAATAGAGAGG 59.936 40.741 0.00 0.00 35.78 3.69
4829 5224 7.601886 ACGATTCATTGATGCCTAAATAGAGAG 59.398 37.037 0.00 0.00 0.00 3.20
4830 5225 7.445121 ACGATTCATTGATGCCTAAATAGAGA 58.555 34.615 0.00 0.00 0.00 3.10
4831 5226 7.664082 ACGATTCATTGATGCCTAAATAGAG 57.336 36.000 0.00 0.00 0.00 2.43
4832 5227 9.725019 AATACGATTCATTGATGCCTAAATAGA 57.275 29.630 0.00 0.00 0.00 1.98
4838 5233 8.783093 CCTAAAAATACGATTCATTGATGCCTA 58.217 33.333 0.00 0.00 0.00 3.93
4839 5234 7.285401 ACCTAAAAATACGATTCATTGATGCCT 59.715 33.333 0.00 0.00 0.00 4.75
4840 5235 7.425606 ACCTAAAAATACGATTCATTGATGCC 58.574 34.615 0.00 0.00 0.00 4.40
4841 5236 8.856490 AACCTAAAAATACGATTCATTGATGC 57.144 30.769 0.00 0.00 0.00 3.91
4843 5238 9.716507 CGAAACCTAAAAATACGATTCATTGAT 57.283 29.630 0.00 0.00 0.00 2.57
4844 5239 8.723311 ACGAAACCTAAAAATACGATTCATTGA 58.277 29.630 0.00 0.00 0.00 2.57
4845 5240 8.889849 ACGAAACCTAAAAATACGATTCATTG 57.110 30.769 0.00 0.00 0.00 2.82
4852 5247 9.596677 CACAATTTACGAAACCTAAAAATACGA 57.403 29.630 0.00 0.00 0.00 3.43
4853 5248 9.384682 ACACAATTTACGAAACCTAAAAATACG 57.615 29.630 0.00 0.00 0.00 3.06
4862 5257 8.842280 TGAAATAAGACACAATTTACGAAACCT 58.158 29.630 0.00 0.00 0.00 3.50
4863 5258 9.620660 ATGAAATAAGACACAATTTACGAAACC 57.379 29.630 0.00 0.00 0.00 3.27
4866 5261 9.961266 CGTATGAAATAAGACACAATTTACGAA 57.039 29.630 0.00 0.00 31.23 3.85
4867 5262 9.142515 ACGTATGAAATAAGACACAATTTACGA 57.857 29.630 0.00 0.00 32.74 3.43
4884 5279 9.462174 TCTTACGTTCTCTTTTTACGTATGAAA 57.538 29.630 15.49 0.38 46.28 2.69
4886 5281 9.462174 TTTCTTACGTTCTCTTTTTACGTATGA 57.538 29.630 14.47 14.47 46.28 2.15
5019 5414 9.457436 AAAAGGTTATAAGACCACAAATATCGT 57.543 29.630 0.00 0.00 42.35 3.73
5122 5517 9.459640 CCGAGATAAACTTTCGATCACTTTATA 57.540 33.333 0.00 0.00 36.49 0.98
5123 5518 7.438459 CCCGAGATAAACTTTCGATCACTTTAT 59.562 37.037 0.00 0.00 36.49 1.40
5124 5519 6.755141 CCCGAGATAAACTTTCGATCACTTTA 59.245 38.462 0.00 0.00 36.49 1.85
5125 5520 5.581085 CCCGAGATAAACTTTCGATCACTTT 59.419 40.000 0.00 0.00 36.49 2.66
5126 5521 5.109903 CCCGAGATAAACTTTCGATCACTT 58.890 41.667 0.00 0.00 36.49 3.16
5127 5522 4.159879 ACCCGAGATAAACTTTCGATCACT 59.840 41.667 0.00 0.00 36.49 3.41
5128 5523 4.267928 CACCCGAGATAAACTTTCGATCAC 59.732 45.833 0.00 0.00 36.49 3.06
5129 5524 4.158949 TCACCCGAGATAAACTTTCGATCA 59.841 41.667 0.00 0.00 36.49 2.92
5130 5525 4.679662 TCACCCGAGATAAACTTTCGATC 58.320 43.478 0.00 0.00 36.49 3.69
5131 5526 4.730949 TCACCCGAGATAAACTTTCGAT 57.269 40.909 0.00 0.00 36.49 3.59
5132 5527 4.219070 TCTTCACCCGAGATAAACTTTCGA 59.781 41.667 0.00 0.00 36.49 3.71
5133 5528 4.491676 TCTTCACCCGAGATAAACTTTCG 58.508 43.478 0.00 0.00 0.00 3.46
5134 5529 6.986904 ATTCTTCACCCGAGATAAACTTTC 57.013 37.500 0.00 0.00 0.00 2.62
5135 5530 8.101419 ACTTATTCTTCACCCGAGATAAACTTT 58.899 33.333 0.00 0.00 0.00 2.66
5136 5531 7.621796 ACTTATTCTTCACCCGAGATAAACTT 58.378 34.615 0.00 0.00 0.00 2.66
5137 5532 7.184067 ACTTATTCTTCACCCGAGATAAACT 57.816 36.000 0.00 0.00 0.00 2.66
5138 5533 7.845066 AACTTATTCTTCACCCGAGATAAAC 57.155 36.000 0.00 0.00 0.00 2.01
5140 5535 9.760077 GAATAACTTATTCTTCACCCGAGATAA 57.240 33.333 12.55 0.00 41.00 1.75
5154 5549 7.283127 TCATCCAAGGTGCAGAATAACTTATTC 59.717 37.037 12.07 12.07 43.77 1.75
5155 5550 7.118723 TCATCCAAGGTGCAGAATAACTTATT 58.881 34.615 0.00 0.00 0.00 1.40
5156 5551 6.662755 TCATCCAAGGTGCAGAATAACTTAT 58.337 36.000 0.00 0.00 0.00 1.73
5157 5552 6.061022 TCATCCAAGGTGCAGAATAACTTA 57.939 37.500 0.00 0.00 0.00 2.24
5158 5553 4.922206 TCATCCAAGGTGCAGAATAACTT 58.078 39.130 0.00 0.00 0.00 2.66
5159 5554 4.574674 TCATCCAAGGTGCAGAATAACT 57.425 40.909 0.00 0.00 0.00 2.24
5160 5555 4.883585 TCATCATCCAAGGTGCAGAATAAC 59.116 41.667 0.00 0.00 0.00 1.89
5161 5556 5.114764 TCATCATCCAAGGTGCAGAATAA 57.885 39.130 0.00 0.00 0.00 1.40
5162 5557 4.776435 TCATCATCCAAGGTGCAGAATA 57.224 40.909 0.00 0.00 0.00 1.75
5163 5558 3.657398 TCATCATCCAAGGTGCAGAAT 57.343 42.857 0.00 0.00 0.00 2.40
5164 5559 3.438216 TTCATCATCCAAGGTGCAGAA 57.562 42.857 0.00 0.00 0.00 3.02
5165 5560 3.657398 ATTCATCATCCAAGGTGCAGA 57.343 42.857 0.00 0.00 0.00 4.26
5166 5561 4.458397 ACTATTCATCATCCAAGGTGCAG 58.542 43.478 0.00 0.00 0.00 4.41
5167 5562 4.508551 ACTATTCATCATCCAAGGTGCA 57.491 40.909 0.00 0.00 0.00 4.57
5168 5563 8.798859 ATATTACTATTCATCATCCAAGGTGC 57.201 34.615 0.00 0.00 0.00 5.01
5170 5565 9.745018 CCAATATTACTATTCATCATCCAAGGT 57.255 33.333 0.00 0.00 0.00 3.50
5171 5566 9.745018 ACCAATATTACTATTCATCATCCAAGG 57.255 33.333 0.00 0.00 0.00 3.61
5183 5578 9.860650 TGCCACATTTCTACCAATATTACTATT 57.139 29.630 0.00 0.00 0.00 1.73
5185 5580 9.283768 CATGCCACATTTCTACCAATATTACTA 57.716 33.333 0.00 0.00 0.00 1.82
5186 5581 7.231317 CCATGCCACATTTCTACCAATATTACT 59.769 37.037 0.00 0.00 0.00 2.24
5187 5582 7.230510 TCCATGCCACATTTCTACCAATATTAC 59.769 37.037 0.00 0.00 0.00 1.89
5188 5583 7.230510 GTCCATGCCACATTTCTACCAATATTA 59.769 37.037 0.00 0.00 0.00 0.98
5189 5584 6.040842 GTCCATGCCACATTTCTACCAATATT 59.959 38.462 0.00 0.00 0.00 1.28
5190 5585 5.536161 GTCCATGCCACATTTCTACCAATAT 59.464 40.000 0.00 0.00 0.00 1.28
5191 5586 4.887071 GTCCATGCCACATTTCTACCAATA 59.113 41.667 0.00 0.00 0.00 1.90
5192 5587 3.701040 GTCCATGCCACATTTCTACCAAT 59.299 43.478 0.00 0.00 0.00 3.16
5193 5588 3.088532 GTCCATGCCACATTTCTACCAA 58.911 45.455 0.00 0.00 0.00 3.67
5194 5589 2.040947 TGTCCATGCCACATTTCTACCA 59.959 45.455 0.00 0.00 0.00 3.25
5195 5590 2.722094 TGTCCATGCCACATTTCTACC 58.278 47.619 0.00 0.00 0.00 3.18
5196 5591 4.398988 TCAATGTCCATGCCACATTTCTAC 59.601 41.667 15.21 0.00 41.58 2.59
5197 5592 4.598022 TCAATGTCCATGCCACATTTCTA 58.402 39.130 15.21 5.39 41.58 2.10
5198 5593 3.433343 TCAATGTCCATGCCACATTTCT 58.567 40.909 15.21 0.00 41.58 2.52
5199 5594 3.194116 ACTCAATGTCCATGCCACATTTC 59.806 43.478 15.21 0.00 41.58 2.17
5200 5595 3.167485 ACTCAATGTCCATGCCACATTT 58.833 40.909 15.21 3.28 41.58 2.32
5201 5596 2.811410 ACTCAATGTCCATGCCACATT 58.189 42.857 13.03 13.03 43.80 2.71
5202 5597 2.519771 ACTCAATGTCCATGCCACAT 57.480 45.000 3.29 3.29 35.94 3.21
5203 5598 2.291209 AACTCAATGTCCATGCCACA 57.709 45.000 0.00 0.00 0.00 4.17
5204 5599 2.821969 AGAAACTCAATGTCCATGCCAC 59.178 45.455 0.00 0.00 0.00 5.01
5205 5600 3.159213 AGAAACTCAATGTCCATGCCA 57.841 42.857 0.00 0.00 0.00 4.92
5206 5601 4.265073 ACTAGAAACTCAATGTCCATGCC 58.735 43.478 0.00 0.00 0.00 4.40
5207 5602 5.181748 AGACTAGAAACTCAATGTCCATGC 58.818 41.667 0.00 0.00 0.00 4.06
5208 5603 5.518128 CGAGACTAGAAACTCAATGTCCATG 59.482 44.000 0.00 0.00 33.86 3.66
5209 5604 5.419155 TCGAGACTAGAAACTCAATGTCCAT 59.581 40.000 0.00 0.00 33.86 3.41
5210 5605 4.765339 TCGAGACTAGAAACTCAATGTCCA 59.235 41.667 0.00 0.00 33.86 4.02
5211 5606 5.312120 TCGAGACTAGAAACTCAATGTCC 57.688 43.478 0.00 0.00 33.86 4.02
5212 5607 4.796312 GCTCGAGACTAGAAACTCAATGTC 59.204 45.833 18.75 0.00 33.86 3.06
5213 5608 4.461081 AGCTCGAGACTAGAAACTCAATGT 59.539 41.667 18.75 0.00 33.86 2.71
5214 5609 4.992688 AGCTCGAGACTAGAAACTCAATG 58.007 43.478 18.75 0.00 33.86 2.82
5215 5610 4.702612 TGAGCTCGAGACTAGAAACTCAAT 59.297 41.667 18.75 0.00 31.86 2.57
5216 5611 4.072839 TGAGCTCGAGACTAGAAACTCAA 58.927 43.478 18.75 0.00 31.86 3.02
5217 5612 3.437395 GTGAGCTCGAGACTAGAAACTCA 59.563 47.826 18.75 13.39 32.14 3.41
5218 5613 3.437395 TGTGAGCTCGAGACTAGAAACTC 59.563 47.826 18.75 10.83 0.00 3.01
5219 5614 3.413327 TGTGAGCTCGAGACTAGAAACT 58.587 45.455 18.75 0.00 0.00 2.66
5220 5615 3.833545 TGTGAGCTCGAGACTAGAAAC 57.166 47.619 18.75 9.72 0.00 2.78
5221 5616 3.428180 GCATGTGAGCTCGAGACTAGAAA 60.428 47.826 18.75 0.00 0.00 2.52
5222 5617 2.098280 GCATGTGAGCTCGAGACTAGAA 59.902 50.000 18.75 2.43 0.00 2.10
5223 5618 1.673400 GCATGTGAGCTCGAGACTAGA 59.327 52.381 18.75 0.00 0.00 2.43
5224 5619 1.675483 AGCATGTGAGCTCGAGACTAG 59.325 52.381 18.75 3.88 42.18 2.57
5225 5620 1.756430 AGCATGTGAGCTCGAGACTA 58.244 50.000 18.75 0.00 42.18 2.59
5226 5621 2.577490 AGCATGTGAGCTCGAGACT 58.423 52.632 18.75 12.98 42.18 3.24
5233 5628 3.832615 TCATATGTGAGCATGTGAGCT 57.167 42.857 1.90 0.00 44.56 4.09
5236 5631 4.835678 ACTGTTCATATGTGAGCATGTGA 58.164 39.130 9.34 3.50 46.64 3.58
5237 5632 6.667007 TTACTGTTCATATGTGAGCATGTG 57.333 37.500 9.34 1.64 43.33 3.21
5238 5633 7.627088 GCTTTTACTGTTCATATGTGAGCATGT 60.627 37.037 9.34 11.39 43.33 3.21
5239 5634 6.690098 GCTTTTACTGTTCATATGTGAGCATG 59.310 38.462 9.34 6.79 43.33 4.06
5240 5635 6.600822 AGCTTTTACTGTTCATATGTGAGCAT 59.399 34.615 9.34 3.68 43.33 3.79
5241 5636 5.939883 AGCTTTTACTGTTCATATGTGAGCA 59.060 36.000 8.62 8.62 42.33 4.26
5242 5637 6.092670 TCAGCTTTTACTGTTCATATGTGAGC 59.907 38.462 1.90 0.00 38.84 4.26
5243 5638 7.601073 TCAGCTTTTACTGTTCATATGTGAG 57.399 36.000 1.90 0.21 38.84 3.51
5244 5639 7.119699 CCTTCAGCTTTTACTGTTCATATGTGA 59.880 37.037 1.90 0.00 38.84 3.58
5245 5640 7.246311 CCTTCAGCTTTTACTGTTCATATGTG 58.754 38.462 1.90 0.00 38.84 3.21
5246 5641 6.375455 CCCTTCAGCTTTTACTGTTCATATGT 59.625 38.462 1.90 0.00 38.84 2.29
5247 5642 6.183360 CCCCTTCAGCTTTTACTGTTCATATG 60.183 42.308 0.00 0.00 38.84 1.78
5248 5643 5.888161 CCCCTTCAGCTTTTACTGTTCATAT 59.112 40.000 0.00 0.00 38.84 1.78
5249 5644 5.253330 CCCCTTCAGCTTTTACTGTTCATA 58.747 41.667 0.00 0.00 38.84 2.15
5250 5645 4.082125 CCCCTTCAGCTTTTACTGTTCAT 58.918 43.478 0.00 0.00 38.84 2.57
5251 5646 3.486383 CCCCTTCAGCTTTTACTGTTCA 58.514 45.455 0.00 0.00 38.84 3.18
5252 5647 2.820197 CCCCCTTCAGCTTTTACTGTTC 59.180 50.000 0.00 0.00 38.84 3.18
5253 5648 2.876581 CCCCCTTCAGCTTTTACTGTT 58.123 47.619 0.00 0.00 38.84 3.16
5254 5649 2.586648 CCCCCTTCAGCTTTTACTGT 57.413 50.000 0.00 0.00 38.84 3.55
5313 5708 9.467258 CTGAAACAGTCAATCAATGTTTACATT 57.533 29.630 2.33 2.33 44.76 2.71
5314 5709 7.596248 GCTGAAACAGTCAATCAATGTTTACAT 59.404 33.333 2.79 0.00 44.76 2.29
5315 5710 6.917477 GCTGAAACAGTCAATCAATGTTTACA 59.083 34.615 2.79 3.40 44.76 2.41
5316 5711 7.113965 CAGCTGAAACAGTCAATCAATGTTTAC 59.886 37.037 8.42 0.00 44.76 2.01
5317 5712 7.140705 CAGCTGAAACAGTCAATCAATGTTTA 58.859 34.615 8.42 0.00 44.76 2.01
5318 5713 5.981315 CAGCTGAAACAGTCAATCAATGTTT 59.019 36.000 8.42 2.43 46.75 2.83
5319 5714 5.526115 CAGCTGAAACAGTCAATCAATGTT 58.474 37.500 8.42 0.00 38.76 2.71
5320 5715 4.558095 GCAGCTGAAACAGTCAATCAATGT 60.558 41.667 20.43 0.00 35.22 2.71
5321 5716 3.918591 GCAGCTGAAACAGTCAATCAATG 59.081 43.478 20.43 0.00 35.22 2.82
5322 5717 3.365666 CGCAGCTGAAACAGTCAATCAAT 60.366 43.478 20.43 0.00 35.22 2.57
5323 5718 2.031769 CGCAGCTGAAACAGTCAATCAA 60.032 45.455 20.43 0.00 35.22 2.57
5324 5719 1.532437 CGCAGCTGAAACAGTCAATCA 59.468 47.619 20.43 0.00 35.22 2.57
5325 5720 1.532868 ACGCAGCTGAAACAGTCAATC 59.467 47.619 20.43 0.00 35.22 2.67
5326 5721 1.265095 CACGCAGCTGAAACAGTCAAT 59.735 47.619 20.43 0.00 35.22 2.57
5327 5722 0.657312 CACGCAGCTGAAACAGTCAA 59.343 50.000 20.43 0.00 35.22 3.18
5328 5723 1.775039 GCACGCAGCTGAAACAGTCA 61.775 55.000 20.43 0.00 41.15 3.41
5329 5724 1.082496 GCACGCAGCTGAAACAGTC 60.082 57.895 20.43 0.00 41.15 3.51
5330 5725 1.375853 TTGCACGCAGCTGAAACAGT 61.376 50.000 20.43 5.65 45.94 3.55
5331 5726 0.659417 CTTGCACGCAGCTGAAACAG 60.659 55.000 20.43 4.97 45.94 3.16
5332 5727 1.094650 TCTTGCACGCAGCTGAAACA 61.095 50.000 20.43 6.47 45.94 2.83
5333 5728 0.029300 TTCTTGCACGCAGCTGAAAC 59.971 50.000 20.43 3.54 45.94 2.78
5334 5729 0.953727 ATTCTTGCACGCAGCTGAAA 59.046 45.000 20.43 2.04 45.94 2.69
5335 5730 0.953727 AATTCTTGCACGCAGCTGAA 59.046 45.000 20.43 0.54 45.94 3.02
5336 5731 0.953727 AAATTCTTGCACGCAGCTGA 59.046 45.000 20.43 0.00 45.94 4.26
5337 5732 1.057636 CAAATTCTTGCACGCAGCTG 58.942 50.000 10.11 10.11 45.94 4.24
5338 5733 0.670162 ACAAATTCTTGCACGCAGCT 59.330 45.000 2.02 0.00 45.94 4.24
5339 5734 0.780002 CACAAATTCTTGCACGCAGC 59.220 50.000 0.00 0.00 45.96 5.25
5340 5735 2.404265 TCACAAATTCTTGCACGCAG 57.596 45.000 0.00 0.00 35.84 5.18
5341 5736 2.034432 ACATCACAAATTCTTGCACGCA 59.966 40.909 0.00 0.00 35.84 5.24
5342 5737 2.664916 ACATCACAAATTCTTGCACGC 58.335 42.857 0.00 0.00 35.84 5.34
5343 5738 5.286797 CCATTACATCACAAATTCTTGCACG 59.713 40.000 0.00 0.00 35.84 5.34
5344 5739 5.062558 GCCATTACATCACAAATTCTTGCAC 59.937 40.000 0.00 0.00 35.84 4.57
5345 5740 5.170021 GCCATTACATCACAAATTCTTGCA 58.830 37.500 0.00 0.00 35.84 4.08
5346 5741 5.170021 TGCCATTACATCACAAATTCTTGC 58.830 37.500 0.00 0.00 35.84 4.01
5347 5742 7.837202 AATGCCATTACATCACAAATTCTTG 57.163 32.000 0.00 0.00 38.61 3.02
5348 5743 7.879160 ACAAATGCCATTACATCACAAATTCTT 59.121 29.630 0.00 0.00 0.00 2.52
5349 5744 7.332430 CACAAATGCCATTACATCACAAATTCT 59.668 33.333 0.00 0.00 0.00 2.40
5350 5745 7.413219 CCACAAATGCCATTACATCACAAATTC 60.413 37.037 0.00 0.00 0.00 2.17
5351 5746 6.372103 CCACAAATGCCATTACATCACAAATT 59.628 34.615 0.00 0.00 0.00 1.82
5352 5747 5.875910 CCACAAATGCCATTACATCACAAAT 59.124 36.000 0.00 0.00 0.00 2.32
5353 5748 5.011431 TCCACAAATGCCATTACATCACAAA 59.989 36.000 0.00 0.00 0.00 2.83
5354 5749 4.525874 TCCACAAATGCCATTACATCACAA 59.474 37.500 0.00 0.00 0.00 3.33
5355 5750 4.085009 TCCACAAATGCCATTACATCACA 58.915 39.130 0.00 0.00 0.00 3.58
5356 5751 4.440525 CCTCCACAAATGCCATTACATCAC 60.441 45.833 0.00 0.00 0.00 3.06
5357 5752 3.700539 CCTCCACAAATGCCATTACATCA 59.299 43.478 0.00 0.00 0.00 3.07
5358 5753 3.701040 ACCTCCACAAATGCCATTACATC 59.299 43.478 0.00 0.00 0.00 3.06
5359 5754 3.701040 GACCTCCACAAATGCCATTACAT 59.299 43.478 0.00 0.00 0.00 2.29
5360 5755 3.088532 GACCTCCACAAATGCCATTACA 58.911 45.455 0.00 0.00 0.00 2.41
5361 5756 3.129287 CAGACCTCCACAAATGCCATTAC 59.871 47.826 0.00 0.00 0.00 1.89
5362 5757 3.355378 CAGACCTCCACAAATGCCATTA 58.645 45.455 0.00 0.00 0.00 1.90
5363 5758 2.173519 CAGACCTCCACAAATGCCATT 58.826 47.619 0.00 0.00 0.00 3.16
5364 5759 1.617804 CCAGACCTCCACAAATGCCAT 60.618 52.381 0.00 0.00 0.00 4.40
5365 5760 0.251297 CCAGACCTCCACAAATGCCA 60.251 55.000 0.00 0.00 0.00 4.92
5366 5761 0.967380 CCCAGACCTCCACAAATGCC 60.967 60.000 0.00 0.00 0.00 4.40
5367 5762 1.598701 GCCCAGACCTCCACAAATGC 61.599 60.000 0.00 0.00 0.00 3.56
5368 5763 0.038744 AGCCCAGACCTCCACAAATG 59.961 55.000 0.00 0.00 0.00 2.32
5369 5764 1.668826 TAGCCCAGACCTCCACAAAT 58.331 50.000 0.00 0.00 0.00 2.32
5370 5765 1.668826 ATAGCCCAGACCTCCACAAA 58.331 50.000 0.00 0.00 0.00 2.83
5371 5766 1.668826 AATAGCCCAGACCTCCACAA 58.331 50.000 0.00 0.00 0.00 3.33
5372 5767 2.561209 TAATAGCCCAGACCTCCACA 57.439 50.000 0.00 0.00 0.00 4.17
5373 5768 3.926058 TTTAATAGCCCAGACCTCCAC 57.074 47.619 0.00 0.00 0.00 4.02
5374 5769 3.589735 TGTTTTAATAGCCCAGACCTCCA 59.410 43.478 0.00 0.00 0.00 3.86
5375 5770 4.080526 TCTGTTTTAATAGCCCAGACCTCC 60.081 45.833 0.00 0.00 0.00 4.30
5376 5771 5.099042 TCTGTTTTAATAGCCCAGACCTC 57.901 43.478 0.00 0.00 0.00 3.85
5377 5772 5.514500 TTCTGTTTTAATAGCCCAGACCT 57.486 39.130 0.00 0.00 32.26 3.85
5378 5773 6.122964 AGATTCTGTTTTAATAGCCCAGACC 58.877 40.000 0.00 0.00 32.26 3.85
5379 5774 8.910351 ATAGATTCTGTTTTAATAGCCCAGAC 57.090 34.615 0.00 0.00 32.26 3.51
5380 5775 9.998106 GTATAGATTCTGTTTTAATAGCCCAGA 57.002 33.333 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.