Multiple sequence alignment - TraesCS6A01G267400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G267400 chr6A 100.000 3140 0 0 1 3140 492809163 492806024 0.000000e+00 5799
1 TraesCS6A01G267400 chr6A 93.052 403 27 1 3 404 164556488 164556890 3.490000e-164 588
2 TraesCS6A01G267400 chr6A 92.840 405 28 1 1 404 365334430 365334026 1.250000e-163 586
3 TraesCS6A01G267400 chr6B 92.760 2790 137 32 406 3139 528918353 528915573 0.000000e+00 3973
4 TraesCS6A01G267400 chr6D 91.750 2691 131 27 406 3040 350912650 350915305 0.000000e+00 3655
5 TraesCS6A01G267400 chr6D 82.792 308 33 8 406 696 380999004 380999308 1.120000e-64 257
6 TraesCS6A01G267400 chr6D 98.095 105 2 0 3036 3140 350928027 350928131 1.920000e-42 183
7 TraesCS6A01G267400 chr4D 93.103 406 26 2 1 404 314846644 314847049 7.500000e-166 593
8 TraesCS6A01G267400 chr4D 80.827 532 48 14 406 888 91236398 91235872 4.950000e-98 368
9 TraesCS6A01G267400 chr3A 93.086 405 27 1 1 404 185077277 185077681 2.700000e-165 592
10 TraesCS6A01G267400 chr3A 91.441 222 19 0 516 737 177112115 177111894 3.930000e-79 305
11 TraesCS6A01G267400 chr1A 93.086 405 27 1 1 404 287262367 287262771 2.700000e-165 592
12 TraesCS6A01G267400 chr1A 92.289 415 27 4 1 412 264153718 264154130 4.510000e-163 584
13 TraesCS6A01G267400 chr2D 92.647 408 26 4 1 406 528793499 528793094 4.510000e-163 584
14 TraesCS6A01G267400 chr2D 92.857 406 24 5 1 404 528801874 528801472 4.510000e-163 584
15 TraesCS6A01G267400 chr2D 84.527 349 34 9 406 737 74989622 74989277 8.400000e-86 327
16 TraesCS6A01G267400 chr2D 77.130 223 34 9 406 617 571949530 571949746 2.560000e-21 113
17 TraesCS6A01G267400 chr5D 92.195 410 30 2 1 408 18014626 18015035 2.100000e-161 579
18 TraesCS6A01G267400 chr2B 83.280 311 33 7 406 699 787137651 787137343 5.160000e-68 268
19 TraesCS6A01G267400 chr2B 89.604 202 20 1 495 696 236779273 236779073 4.020000e-64 255
20 TraesCS6A01G267400 chr3B 83.117 308 33 7 406 696 223657507 223657812 2.400000e-66 263
21 TraesCS6A01G267400 chr2A 89.423 208 20 2 495 702 699814401 699814606 8.640000e-66 261
22 TraesCS6A01G267400 chr2A 80.114 352 44 10 406 737 710613112 710613457 4.050000e-59 239
23 TraesCS6A01G267400 chr2A 89.130 92 9 1 733 824 682973828 682973918 2.560000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G267400 chr6A 492806024 492809163 3139 True 5799 5799 100.000 1 3140 1 chr6A.!!$R2 3139
1 TraesCS6A01G267400 chr6B 528915573 528918353 2780 True 3973 3973 92.760 406 3139 1 chr6B.!!$R1 2733
2 TraesCS6A01G267400 chr6D 350912650 350915305 2655 False 3655 3655 91.750 406 3040 1 chr6D.!!$F1 2634
3 TraesCS6A01G267400 chr4D 91235872 91236398 526 True 368 368 80.827 406 888 1 chr4D.!!$R1 482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 353 0.036765 TGTGTCAGCATTACCGGTCC 60.037 55.0 12.4 0.0 0.00 4.46 F
353 354 0.036765 GTGTCAGCATTACCGGTCCA 60.037 55.0 12.4 0.0 0.00 4.02 F
398 399 0.179134 GACCGTCTGAGATTGGGTCG 60.179 60.0 12.4 0.0 37.96 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1244 1325 0.398098 GTACGAGAGGGATTGGGGGA 60.398 60.000 0.00 0.00 0.00 4.81 R
2065 2146 1.064803 CATCGTCTCCCTCGAGTTCAG 59.935 57.143 12.31 3.98 40.57 3.02 R
2353 2434 0.320421 GCGAGAAGTTACAGGCCACA 60.320 55.000 5.01 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.035139 CCTCCACCAGCCAAATATGC 58.965 55.000 0.00 0.00 0.00 3.14
20 21 1.685803 CCTCCACCAGCCAAATATGCA 60.686 52.381 0.00 0.00 0.00 3.96
21 22 2.313317 CTCCACCAGCCAAATATGCAT 58.687 47.619 3.79 3.79 0.00 3.96
22 23 2.033372 TCCACCAGCCAAATATGCATG 58.967 47.619 10.16 0.00 0.00 4.06
23 24 1.758280 CCACCAGCCAAATATGCATGT 59.242 47.619 10.16 0.00 0.00 3.21
24 25 2.957680 CCACCAGCCAAATATGCATGTA 59.042 45.455 10.16 0.00 0.00 2.29
25 26 3.005050 CCACCAGCCAAATATGCATGTAG 59.995 47.826 10.16 0.00 0.00 2.74
26 27 3.633525 CACCAGCCAAATATGCATGTAGT 59.366 43.478 10.16 0.00 0.00 2.73
27 28 3.633525 ACCAGCCAAATATGCATGTAGTG 59.366 43.478 10.16 4.81 0.00 2.74
28 29 3.884693 CCAGCCAAATATGCATGTAGTGA 59.115 43.478 10.16 0.00 0.00 3.41
29 30 4.521639 CCAGCCAAATATGCATGTAGTGAT 59.478 41.667 10.16 0.00 0.00 3.06
30 31 5.706833 CCAGCCAAATATGCATGTAGTGATA 59.293 40.000 10.16 0.00 0.00 2.15
31 32 6.128090 CCAGCCAAATATGCATGTAGTGATAG 60.128 42.308 10.16 0.00 0.00 2.08
32 33 5.413833 AGCCAAATATGCATGTAGTGATAGC 59.586 40.000 10.16 4.42 0.00 2.97
33 34 5.392380 GCCAAATATGCATGTAGTGATAGCC 60.392 44.000 10.16 0.00 0.00 3.93
34 35 5.942236 CCAAATATGCATGTAGTGATAGCCT 59.058 40.000 10.16 0.00 0.00 4.58
35 36 6.432162 CCAAATATGCATGTAGTGATAGCCTT 59.568 38.462 10.16 0.00 0.00 4.35
36 37 7.040201 CCAAATATGCATGTAGTGATAGCCTTT 60.040 37.037 10.16 0.00 0.00 3.11
37 38 9.002600 CAAATATGCATGTAGTGATAGCCTTTA 57.997 33.333 10.16 0.00 0.00 1.85
38 39 8.553459 AATATGCATGTAGTGATAGCCTTTAC 57.447 34.615 10.16 0.00 0.00 2.01
39 40 4.703897 TGCATGTAGTGATAGCCTTTACC 58.296 43.478 0.00 0.00 0.00 2.85
40 41 4.408921 TGCATGTAGTGATAGCCTTTACCT 59.591 41.667 0.00 0.00 0.00 3.08
41 42 4.752101 GCATGTAGTGATAGCCTTTACCTG 59.248 45.833 0.00 0.00 0.00 4.00
42 43 5.685075 GCATGTAGTGATAGCCTTTACCTGT 60.685 44.000 0.00 0.00 0.00 4.00
43 44 5.593679 TGTAGTGATAGCCTTTACCTGTC 57.406 43.478 0.00 0.00 0.00 3.51
44 45 4.404715 TGTAGTGATAGCCTTTACCTGTCC 59.595 45.833 0.00 0.00 0.00 4.02
45 46 3.450904 AGTGATAGCCTTTACCTGTCCA 58.549 45.455 0.00 0.00 0.00 4.02
46 47 4.040755 AGTGATAGCCTTTACCTGTCCAT 58.959 43.478 0.00 0.00 0.00 3.41
47 48 4.475016 AGTGATAGCCTTTACCTGTCCATT 59.525 41.667 0.00 0.00 0.00 3.16
48 49 4.576463 GTGATAGCCTTTACCTGTCCATTG 59.424 45.833 0.00 0.00 0.00 2.82
49 50 1.839424 AGCCTTTACCTGTCCATTGC 58.161 50.000 0.00 0.00 0.00 3.56
50 51 1.355720 AGCCTTTACCTGTCCATTGCT 59.644 47.619 0.00 0.00 0.00 3.91
51 52 2.171003 GCCTTTACCTGTCCATTGCTT 58.829 47.619 0.00 0.00 0.00 3.91
52 53 2.562738 GCCTTTACCTGTCCATTGCTTT 59.437 45.455 0.00 0.00 0.00 3.51
53 54 3.761752 GCCTTTACCTGTCCATTGCTTTA 59.238 43.478 0.00 0.00 0.00 1.85
54 55 4.380550 GCCTTTACCTGTCCATTGCTTTAC 60.381 45.833 0.00 0.00 0.00 2.01
55 56 5.010282 CCTTTACCTGTCCATTGCTTTACT 58.990 41.667 0.00 0.00 0.00 2.24
56 57 5.106157 CCTTTACCTGTCCATTGCTTTACTG 60.106 44.000 0.00 0.00 0.00 2.74
57 58 3.508845 ACCTGTCCATTGCTTTACTGT 57.491 42.857 0.00 0.00 0.00 3.55
58 59 3.149196 ACCTGTCCATTGCTTTACTGTG 58.851 45.455 0.00 0.00 0.00 3.66
59 60 3.149196 CCTGTCCATTGCTTTACTGTGT 58.851 45.455 0.00 0.00 0.00 3.72
60 61 3.569701 CCTGTCCATTGCTTTACTGTGTT 59.430 43.478 0.00 0.00 0.00 3.32
61 62 4.759693 CCTGTCCATTGCTTTACTGTGTTA 59.240 41.667 0.00 0.00 0.00 2.41
62 63 5.415701 CCTGTCCATTGCTTTACTGTGTTAT 59.584 40.000 0.00 0.00 0.00 1.89
63 64 6.071952 CCTGTCCATTGCTTTACTGTGTTATT 60.072 38.462 0.00 0.00 0.00 1.40
64 65 7.283625 TGTCCATTGCTTTACTGTGTTATTT 57.716 32.000 0.00 0.00 0.00 1.40
65 66 7.721402 TGTCCATTGCTTTACTGTGTTATTTT 58.279 30.769 0.00 0.00 0.00 1.82
66 67 7.651304 TGTCCATTGCTTTACTGTGTTATTTTG 59.349 33.333 0.00 0.00 0.00 2.44
67 68 6.644592 TCCATTGCTTTACTGTGTTATTTTGC 59.355 34.615 0.00 0.00 0.00 3.68
68 69 6.128580 CCATTGCTTTACTGTGTTATTTTGCC 60.129 38.462 0.00 0.00 0.00 4.52
69 70 5.521906 TGCTTTACTGTGTTATTTTGCCA 57.478 34.783 0.00 0.00 0.00 4.92
70 71 5.527951 TGCTTTACTGTGTTATTTTGCCAG 58.472 37.500 0.00 0.00 0.00 4.85
71 72 4.385748 GCTTTACTGTGTTATTTTGCCAGC 59.614 41.667 0.00 0.00 0.00 4.85
72 73 5.521906 TTTACTGTGTTATTTTGCCAGCA 57.478 34.783 0.00 0.00 0.00 4.41
73 74 5.720371 TTACTGTGTTATTTTGCCAGCAT 57.280 34.783 0.00 0.00 0.00 3.79
74 75 6.825944 TTACTGTGTTATTTTGCCAGCATA 57.174 33.333 0.00 0.00 0.00 3.14
75 76 5.920193 ACTGTGTTATTTTGCCAGCATAT 57.080 34.783 0.00 0.00 0.00 1.78
76 77 6.284891 ACTGTGTTATTTTGCCAGCATATT 57.715 33.333 0.00 0.00 0.00 1.28
77 78 6.700352 ACTGTGTTATTTTGCCAGCATATTT 58.300 32.000 0.00 0.00 0.00 1.40
78 79 6.813152 ACTGTGTTATTTTGCCAGCATATTTC 59.187 34.615 0.00 0.00 0.00 2.17
79 80 6.695429 TGTGTTATTTTGCCAGCATATTTCA 58.305 32.000 0.00 0.00 0.00 2.69
80 81 7.329499 TGTGTTATTTTGCCAGCATATTTCAT 58.671 30.769 0.00 0.00 0.00 2.57
81 82 7.278203 TGTGTTATTTTGCCAGCATATTTCATG 59.722 33.333 0.00 0.00 0.00 3.07
82 83 7.278424 GTGTTATTTTGCCAGCATATTTCATGT 59.722 33.333 0.00 0.00 0.00 3.21
83 84 7.278203 TGTTATTTTGCCAGCATATTTCATGTG 59.722 33.333 0.00 0.00 0.00 3.21
84 85 2.875087 TGCCAGCATATTTCATGTGC 57.125 45.000 0.00 0.00 46.26 4.57
90 91 3.360249 GCATATTTCATGTGCTGACCC 57.640 47.619 0.00 0.00 43.11 4.46
91 92 2.287188 GCATATTTCATGTGCTGACCCG 60.287 50.000 0.00 0.00 43.11 5.28
92 93 2.779755 TATTTCATGTGCTGACCCGT 57.220 45.000 0.00 0.00 32.17 5.28
93 94 1.909700 ATTTCATGTGCTGACCCGTT 58.090 45.000 0.00 0.00 32.17 4.44
94 95 1.686355 TTTCATGTGCTGACCCGTTT 58.314 45.000 0.00 0.00 32.17 3.60
95 96 1.686355 TTCATGTGCTGACCCGTTTT 58.314 45.000 0.00 0.00 32.17 2.43
96 97 1.234821 TCATGTGCTGACCCGTTTTC 58.765 50.000 0.00 0.00 0.00 2.29
97 98 0.110238 CATGTGCTGACCCGTTTTCG 60.110 55.000 0.00 0.00 43.67 3.46
107 108 2.426752 CGTTTTCGGGCTGCAACG 60.427 61.111 13.80 13.80 39.94 4.10
108 109 2.719354 GTTTTCGGGCTGCAACGT 59.281 55.556 14.05 0.00 0.00 3.99
109 110 1.833434 CGTTTTCGGGCTGCAACGTA 61.833 55.000 17.55 3.96 37.75 3.57
110 111 0.519961 GTTTTCGGGCTGCAACGTAT 59.480 50.000 14.05 0.00 0.00 3.06
111 112 0.800012 TTTTCGGGCTGCAACGTATC 59.200 50.000 14.05 0.00 0.00 2.24
112 113 0.320858 TTTCGGGCTGCAACGTATCA 60.321 50.000 14.05 0.00 0.00 2.15
113 114 0.107897 TTCGGGCTGCAACGTATCAT 60.108 50.000 14.05 0.00 0.00 2.45
114 115 0.747852 TCGGGCTGCAACGTATCATA 59.252 50.000 14.05 0.00 0.00 2.15
115 116 1.343142 TCGGGCTGCAACGTATCATAT 59.657 47.619 14.05 0.00 0.00 1.78
116 117 2.143122 CGGGCTGCAACGTATCATATT 58.857 47.619 0.50 0.00 0.00 1.28
117 118 2.096268 CGGGCTGCAACGTATCATATTG 60.096 50.000 0.50 0.00 0.00 1.90
124 125 5.409643 GCAACGTATCATATTGCAGACTT 57.590 39.130 3.42 0.00 46.37 3.01
125 126 5.810525 GCAACGTATCATATTGCAGACTTT 58.189 37.500 3.42 0.00 46.37 2.66
126 127 6.258160 GCAACGTATCATATTGCAGACTTTT 58.742 36.000 3.42 0.00 46.37 2.27
127 128 6.412072 GCAACGTATCATATTGCAGACTTTTC 59.588 38.462 3.42 0.00 46.37 2.29
128 129 7.463544 CAACGTATCATATTGCAGACTTTTCA 58.536 34.615 0.00 0.00 0.00 2.69
129 130 7.239166 ACGTATCATATTGCAGACTTTTCAG 57.761 36.000 0.00 0.00 0.00 3.02
130 131 7.041721 ACGTATCATATTGCAGACTTTTCAGA 58.958 34.615 0.00 0.00 0.00 3.27
131 132 7.010552 ACGTATCATATTGCAGACTTTTCAGAC 59.989 37.037 0.00 0.00 0.00 3.51
132 133 5.784750 TCATATTGCAGACTTTTCAGACG 57.215 39.130 0.00 0.00 0.00 4.18
133 134 5.478407 TCATATTGCAGACTTTTCAGACGA 58.522 37.500 0.00 0.00 0.00 4.20
134 135 5.578336 TCATATTGCAGACTTTTCAGACGAG 59.422 40.000 0.00 0.00 0.00 4.18
135 136 2.154854 TGCAGACTTTTCAGACGAGG 57.845 50.000 0.00 0.00 0.00 4.63
136 137 1.686587 TGCAGACTTTTCAGACGAGGA 59.313 47.619 0.00 0.00 0.00 3.71
137 138 2.288457 TGCAGACTTTTCAGACGAGGAG 60.288 50.000 0.00 0.00 0.00 3.69
138 139 2.288518 GCAGACTTTTCAGACGAGGAGT 60.289 50.000 0.00 0.00 0.00 3.85
139 140 3.057456 GCAGACTTTTCAGACGAGGAGTA 60.057 47.826 0.00 0.00 0.00 2.59
140 141 4.558898 GCAGACTTTTCAGACGAGGAGTAA 60.559 45.833 0.00 0.00 0.00 2.24
141 142 5.157781 CAGACTTTTCAGACGAGGAGTAAG 58.842 45.833 0.00 0.00 0.00 2.34
142 143 5.048643 CAGACTTTTCAGACGAGGAGTAAGA 60.049 44.000 0.00 0.00 0.00 2.10
143 144 5.712917 AGACTTTTCAGACGAGGAGTAAGAT 59.287 40.000 0.00 0.00 0.00 2.40
144 145 5.715070 ACTTTTCAGACGAGGAGTAAGATG 58.285 41.667 0.00 0.00 0.00 2.90
145 146 3.784701 TTCAGACGAGGAGTAAGATGC 57.215 47.619 0.00 0.00 0.00 3.91
146 147 2.025155 TCAGACGAGGAGTAAGATGCC 58.975 52.381 0.00 0.00 0.00 4.40
147 148 1.025812 AGACGAGGAGTAAGATGCCG 58.974 55.000 0.00 0.00 0.00 5.69
148 149 0.739561 GACGAGGAGTAAGATGCCGT 59.260 55.000 0.00 0.00 0.00 5.68
149 150 1.945394 GACGAGGAGTAAGATGCCGTA 59.055 52.381 0.00 0.00 0.00 4.02
150 151 1.948145 ACGAGGAGTAAGATGCCGTAG 59.052 52.381 0.00 0.00 0.00 3.51
165 166 1.424403 CGTAGGTCGTTTGTCATGCA 58.576 50.000 0.00 0.00 34.52 3.96
166 167 1.126113 CGTAGGTCGTTTGTCATGCAC 59.874 52.381 0.00 0.00 34.52 4.57
167 168 2.413837 GTAGGTCGTTTGTCATGCACT 58.586 47.619 0.00 0.00 0.00 4.40
168 169 1.512926 AGGTCGTTTGTCATGCACTC 58.487 50.000 0.00 0.00 0.00 3.51
169 170 0.163788 GGTCGTTTGTCATGCACTCG 59.836 55.000 0.00 0.00 0.00 4.18
170 171 0.163788 GTCGTTTGTCATGCACTCGG 59.836 55.000 0.00 0.00 0.00 4.63
171 172 1.154413 CGTTTGTCATGCACTCGGC 60.154 57.895 0.00 0.00 45.13 5.54
172 173 1.568612 CGTTTGTCATGCACTCGGCT 61.569 55.000 0.00 0.00 45.15 5.52
173 174 1.438651 GTTTGTCATGCACTCGGCTA 58.561 50.000 0.00 0.00 45.15 3.93
174 175 2.009774 GTTTGTCATGCACTCGGCTAT 58.990 47.619 0.00 0.00 45.15 2.97
175 176 1.655484 TTGTCATGCACTCGGCTATG 58.345 50.000 0.00 0.00 45.15 2.23
176 177 0.811219 TGTCATGCACTCGGCTATGC 60.811 55.000 0.00 0.00 45.15 3.14
177 178 1.227645 TCATGCACTCGGCTATGCC 60.228 57.895 0.00 0.00 46.75 4.40
186 187 4.637771 GGCTATGCCGTTGGAGTT 57.362 55.556 0.00 0.00 39.62 3.01
187 188 2.098293 GGCTATGCCGTTGGAGTTG 58.902 57.895 0.00 0.00 39.62 3.16
188 189 0.392461 GGCTATGCCGTTGGAGTTGA 60.392 55.000 0.00 0.00 39.62 3.18
189 190 1.668419 GCTATGCCGTTGGAGTTGAT 58.332 50.000 0.00 0.00 0.00 2.57
190 191 1.331756 GCTATGCCGTTGGAGTTGATG 59.668 52.381 0.00 0.00 0.00 3.07
191 192 1.942657 CTATGCCGTTGGAGTTGATGG 59.057 52.381 0.00 0.00 0.00 3.51
192 193 0.327924 ATGCCGTTGGAGTTGATGGA 59.672 50.000 0.00 0.00 0.00 3.41
193 194 0.605319 TGCCGTTGGAGTTGATGGAC 60.605 55.000 0.00 0.00 0.00 4.02
194 195 0.321653 GCCGTTGGAGTTGATGGACT 60.322 55.000 0.00 0.00 0.00 3.85
195 196 1.726853 CCGTTGGAGTTGATGGACTC 58.273 55.000 0.00 0.00 44.20 3.36
196 197 1.001974 CCGTTGGAGTTGATGGACTCA 59.998 52.381 7.27 0.00 46.21 3.41
197 198 2.069273 CGTTGGAGTTGATGGACTCAC 58.931 52.381 7.27 0.00 46.21 3.51
198 199 2.289072 CGTTGGAGTTGATGGACTCACT 60.289 50.000 7.27 0.00 46.21 3.41
199 200 3.744660 GTTGGAGTTGATGGACTCACTT 58.255 45.455 7.27 0.00 46.21 3.16
200 201 4.137543 GTTGGAGTTGATGGACTCACTTT 58.862 43.478 7.27 0.00 46.21 2.66
201 202 4.437682 TGGAGTTGATGGACTCACTTTT 57.562 40.909 7.27 0.00 46.21 2.27
202 203 4.389374 TGGAGTTGATGGACTCACTTTTC 58.611 43.478 7.27 0.00 46.21 2.29
203 204 4.103153 TGGAGTTGATGGACTCACTTTTCT 59.897 41.667 7.27 0.00 46.21 2.52
204 205 5.066593 GGAGTTGATGGACTCACTTTTCTT 58.933 41.667 7.27 0.00 46.21 2.52
205 206 5.180304 GGAGTTGATGGACTCACTTTTCTTC 59.820 44.000 7.27 0.00 46.21 2.87
206 207 5.066593 AGTTGATGGACTCACTTTTCTTCC 58.933 41.667 0.00 0.00 32.17 3.46
207 208 4.705110 TGATGGACTCACTTTTCTTCCA 57.295 40.909 0.00 0.00 40.61 3.53
208 209 5.047566 TGATGGACTCACTTTTCTTCCAA 57.952 39.130 0.00 0.00 39.77 3.53
209 210 5.065914 TGATGGACTCACTTTTCTTCCAAG 58.934 41.667 0.00 0.00 39.77 3.61
210 211 3.214328 TGGACTCACTTTTCTTCCAAGC 58.786 45.455 0.00 0.00 33.31 4.01
211 212 2.554462 GGACTCACTTTTCTTCCAAGCC 59.446 50.000 0.00 0.00 0.00 4.35
212 213 3.481453 GACTCACTTTTCTTCCAAGCCT 58.519 45.455 0.00 0.00 0.00 4.58
213 214 3.885901 GACTCACTTTTCTTCCAAGCCTT 59.114 43.478 0.00 0.00 0.00 4.35
214 215 3.885901 ACTCACTTTTCTTCCAAGCCTTC 59.114 43.478 0.00 0.00 0.00 3.46
215 216 3.222603 TCACTTTTCTTCCAAGCCTTCC 58.777 45.455 0.00 0.00 0.00 3.46
216 217 2.958355 CACTTTTCTTCCAAGCCTTCCA 59.042 45.455 0.00 0.00 0.00 3.53
217 218 3.575687 CACTTTTCTTCCAAGCCTTCCAT 59.424 43.478 0.00 0.00 0.00 3.41
218 219 4.039609 CACTTTTCTTCCAAGCCTTCCATT 59.960 41.667 0.00 0.00 0.00 3.16
219 220 4.039609 ACTTTTCTTCCAAGCCTTCCATTG 59.960 41.667 0.00 0.00 0.00 2.82
220 221 2.978156 TCTTCCAAGCCTTCCATTGT 57.022 45.000 0.00 0.00 0.00 2.71
221 222 3.243359 TCTTCCAAGCCTTCCATTGTT 57.757 42.857 0.00 0.00 0.00 2.83
222 223 4.380843 TCTTCCAAGCCTTCCATTGTTA 57.619 40.909 0.00 0.00 0.00 2.41
223 224 4.934356 TCTTCCAAGCCTTCCATTGTTAT 58.066 39.130 0.00 0.00 0.00 1.89
224 225 4.949856 TCTTCCAAGCCTTCCATTGTTATC 59.050 41.667 0.00 0.00 0.00 1.75
225 226 3.278574 TCCAAGCCTTCCATTGTTATCG 58.721 45.455 0.00 0.00 0.00 2.92
226 227 3.016736 CCAAGCCTTCCATTGTTATCGT 58.983 45.455 0.00 0.00 0.00 3.73
227 228 3.443681 CCAAGCCTTCCATTGTTATCGTT 59.556 43.478 0.00 0.00 0.00 3.85
228 229 4.082245 CCAAGCCTTCCATTGTTATCGTTT 60.082 41.667 0.00 0.00 0.00 3.60
229 230 5.469479 CAAGCCTTCCATTGTTATCGTTTT 58.531 37.500 0.00 0.00 0.00 2.43
230 231 5.722021 AGCCTTCCATTGTTATCGTTTTT 57.278 34.783 0.00 0.00 0.00 1.94
231 232 6.827586 AGCCTTCCATTGTTATCGTTTTTA 57.172 33.333 0.00 0.00 0.00 1.52
232 233 6.852664 AGCCTTCCATTGTTATCGTTTTTAG 58.147 36.000 0.00 0.00 0.00 1.85
233 234 6.657541 AGCCTTCCATTGTTATCGTTTTTAGA 59.342 34.615 0.00 0.00 0.00 2.10
234 235 7.339466 AGCCTTCCATTGTTATCGTTTTTAGAT 59.661 33.333 0.00 0.00 0.00 1.98
235 236 7.432252 GCCTTCCATTGTTATCGTTTTTAGATG 59.568 37.037 0.00 0.00 0.00 2.90
236 237 7.915397 CCTTCCATTGTTATCGTTTTTAGATGG 59.085 37.037 0.00 0.00 34.31 3.51
237 238 7.931578 TCCATTGTTATCGTTTTTAGATGGT 57.068 32.000 0.00 0.00 34.56 3.55
238 239 7.981142 TCCATTGTTATCGTTTTTAGATGGTC 58.019 34.615 0.00 0.00 34.56 4.02
239 240 7.827236 TCCATTGTTATCGTTTTTAGATGGTCT 59.173 33.333 0.00 0.00 34.56 3.85
240 241 8.458843 CCATTGTTATCGTTTTTAGATGGTCTT 58.541 33.333 0.00 0.00 0.00 3.01
244 245 8.662141 TGTTATCGTTTTTAGATGGTCTTAAGC 58.338 33.333 0.00 0.00 0.00 3.09
245 246 6.679327 ATCGTTTTTAGATGGTCTTAAGCC 57.321 37.500 0.00 3.33 0.00 4.35
246 247 5.553123 TCGTTTTTAGATGGTCTTAAGCCA 58.447 37.500 17.36 17.36 40.68 4.75
248 249 7.332557 TCGTTTTTAGATGGTCTTAAGCCATA 58.667 34.615 23.13 11.89 45.87 2.74
249 250 7.990886 TCGTTTTTAGATGGTCTTAAGCCATAT 59.009 33.333 23.13 22.31 45.87 1.78
250 251 8.621286 CGTTTTTAGATGGTCTTAAGCCATATT 58.379 33.333 23.13 18.21 45.87 1.28
278 279 9.911788 ATTGTAATGAGTTATCCTTTGAGACAT 57.088 29.630 0.00 0.00 0.00 3.06
279 280 9.739276 TTGTAATGAGTTATCCTTTGAGACATT 57.261 29.630 0.00 0.00 0.00 2.71
280 281 9.383519 TGTAATGAGTTATCCTTTGAGACATTC 57.616 33.333 0.00 0.00 0.00 2.67
281 282 7.545362 AATGAGTTATCCTTTGAGACATTCG 57.455 36.000 0.00 0.00 0.00 3.34
282 283 6.280855 TGAGTTATCCTTTGAGACATTCGA 57.719 37.500 0.00 0.00 0.00 3.71
283 284 6.878317 TGAGTTATCCTTTGAGACATTCGAT 58.122 36.000 0.00 0.00 0.00 3.59
284 285 6.758416 TGAGTTATCCTTTGAGACATTCGATG 59.242 38.462 0.00 0.00 0.00 3.84
286 287 7.782049 AGTTATCCTTTGAGACATTCGATGTA 58.218 34.615 0.00 0.00 45.03 2.29
287 288 8.258007 AGTTATCCTTTGAGACATTCGATGTAA 58.742 33.333 0.00 0.00 45.03 2.41
288 289 9.046296 GTTATCCTTTGAGACATTCGATGTAAT 57.954 33.333 0.00 0.00 45.03 1.89
291 292 8.648557 TCCTTTGAGACATTCGATGTAATAAG 57.351 34.615 0.00 0.00 45.03 1.73
292 293 8.258007 TCCTTTGAGACATTCGATGTAATAAGT 58.742 33.333 0.00 0.00 45.03 2.24
293 294 8.331022 CCTTTGAGACATTCGATGTAATAAGTG 58.669 37.037 0.00 0.00 45.03 3.16
294 295 8.771920 TTTGAGACATTCGATGTAATAAGTGT 57.228 30.769 0.00 0.00 45.03 3.55
295 296 7.755582 TGAGACATTCGATGTAATAAGTGTG 57.244 36.000 0.00 0.00 45.03 3.82
296 297 7.320399 TGAGACATTCGATGTAATAAGTGTGT 58.680 34.615 0.00 0.00 45.03 3.72
297 298 7.275560 TGAGACATTCGATGTAATAAGTGTGTG 59.724 37.037 0.00 0.00 45.03 3.82
298 299 7.320399 AGACATTCGATGTAATAAGTGTGTGA 58.680 34.615 0.00 0.00 45.03 3.58
299 300 7.981789 AGACATTCGATGTAATAAGTGTGTGAT 59.018 33.333 0.00 0.00 45.03 3.06
300 301 8.492673 ACATTCGATGTAATAAGTGTGTGATT 57.507 30.769 0.00 0.00 42.78 2.57
301 302 8.390354 ACATTCGATGTAATAAGTGTGTGATTG 58.610 33.333 0.00 0.00 42.78 2.67
302 303 6.344572 TCGATGTAATAAGTGTGTGATTGC 57.655 37.500 0.00 0.00 0.00 3.56
303 304 6.106003 TCGATGTAATAAGTGTGTGATTGCT 58.894 36.000 0.00 0.00 0.00 3.91
304 305 7.262048 TCGATGTAATAAGTGTGTGATTGCTA 58.738 34.615 0.00 0.00 0.00 3.49
305 306 7.222031 TCGATGTAATAAGTGTGTGATTGCTAC 59.778 37.037 0.00 0.00 0.00 3.58
306 307 7.222805 CGATGTAATAAGTGTGTGATTGCTACT 59.777 37.037 0.00 0.00 0.00 2.57
307 308 7.827819 TGTAATAAGTGTGTGATTGCTACTC 57.172 36.000 0.00 0.00 0.00 2.59
308 309 7.611770 TGTAATAAGTGTGTGATTGCTACTCT 58.388 34.615 0.00 0.00 0.00 3.24
309 310 6.974932 AATAAGTGTGTGATTGCTACTCTG 57.025 37.500 0.00 0.00 0.00 3.35
310 311 4.342862 AAGTGTGTGATTGCTACTCTGT 57.657 40.909 0.00 0.00 0.00 3.41
311 312 4.342862 AGTGTGTGATTGCTACTCTGTT 57.657 40.909 0.00 0.00 0.00 3.16
312 313 5.468540 AGTGTGTGATTGCTACTCTGTTA 57.531 39.130 0.00 0.00 0.00 2.41
313 314 5.230942 AGTGTGTGATTGCTACTCTGTTAC 58.769 41.667 0.00 0.00 0.00 2.50
314 315 4.988540 GTGTGTGATTGCTACTCTGTTACA 59.011 41.667 0.00 0.00 0.00 2.41
315 316 5.465390 GTGTGTGATTGCTACTCTGTTACAA 59.535 40.000 0.00 0.00 0.00 2.41
316 317 6.018262 GTGTGTGATTGCTACTCTGTTACAAA 60.018 38.462 0.00 0.00 0.00 2.83
317 318 6.710295 TGTGTGATTGCTACTCTGTTACAAAT 59.290 34.615 0.00 0.00 0.00 2.32
318 319 7.095229 TGTGTGATTGCTACTCTGTTACAAATC 60.095 37.037 0.00 0.00 0.00 2.17
319 320 6.371548 TGTGATTGCTACTCTGTTACAAATCC 59.628 38.462 2.53 0.00 0.00 3.01
320 321 6.595716 GTGATTGCTACTCTGTTACAAATCCT 59.404 38.462 2.53 0.00 0.00 3.24
321 322 7.119846 GTGATTGCTACTCTGTTACAAATCCTT 59.880 37.037 2.53 0.00 0.00 3.36
322 323 7.334421 TGATTGCTACTCTGTTACAAATCCTTC 59.666 37.037 2.53 0.00 0.00 3.46
323 324 5.168569 TGCTACTCTGTTACAAATCCTTCG 58.831 41.667 0.00 0.00 0.00 3.79
324 325 5.047590 TGCTACTCTGTTACAAATCCTTCGA 60.048 40.000 0.00 0.00 0.00 3.71
325 326 5.517054 GCTACTCTGTTACAAATCCTTCGAG 59.483 44.000 0.00 0.00 0.00 4.04
326 327 5.470047 ACTCTGTTACAAATCCTTCGAGT 57.530 39.130 0.00 0.00 0.00 4.18
327 328 6.585695 ACTCTGTTACAAATCCTTCGAGTA 57.414 37.500 0.00 0.00 0.00 2.59
328 329 7.171630 ACTCTGTTACAAATCCTTCGAGTAT 57.828 36.000 0.00 0.00 0.00 2.12
329 330 7.612677 ACTCTGTTACAAATCCTTCGAGTATT 58.387 34.615 0.00 0.00 0.00 1.89
330 331 8.746530 ACTCTGTTACAAATCCTTCGAGTATTA 58.253 33.333 0.00 0.00 0.00 0.98
331 332 9.751542 CTCTGTTACAAATCCTTCGAGTATTAT 57.248 33.333 0.00 0.00 0.00 1.28
332 333 9.529325 TCTGTTACAAATCCTTCGAGTATTATG 57.471 33.333 0.00 0.00 0.00 1.90
333 334 9.314321 CTGTTACAAATCCTTCGAGTATTATGT 57.686 33.333 0.00 0.00 0.00 2.29
334 335 9.093970 TGTTACAAATCCTTCGAGTATTATGTG 57.906 33.333 0.00 0.00 0.00 3.21
335 336 9.095065 GTTACAAATCCTTCGAGTATTATGTGT 57.905 33.333 0.00 0.00 0.00 3.72
336 337 7.539712 ACAAATCCTTCGAGTATTATGTGTG 57.460 36.000 0.00 0.00 0.00 3.82
337 338 7.103641 ACAAATCCTTCGAGTATTATGTGTGT 58.896 34.615 0.00 0.00 0.00 3.72
338 339 7.277981 ACAAATCCTTCGAGTATTATGTGTGTC 59.722 37.037 0.00 0.00 0.00 3.67
339 340 5.907866 TCCTTCGAGTATTATGTGTGTCA 57.092 39.130 0.00 0.00 0.00 3.58
340 341 5.891451 TCCTTCGAGTATTATGTGTGTCAG 58.109 41.667 0.00 0.00 0.00 3.51
341 342 4.504461 CCTTCGAGTATTATGTGTGTCAGC 59.496 45.833 0.00 0.00 0.00 4.26
342 343 4.712122 TCGAGTATTATGTGTGTCAGCA 57.288 40.909 0.00 0.00 0.00 4.41
343 344 5.262588 TCGAGTATTATGTGTGTCAGCAT 57.737 39.130 0.00 0.00 0.00 3.79
344 345 5.660460 TCGAGTATTATGTGTGTCAGCATT 58.340 37.500 0.00 0.00 0.00 3.56
345 346 6.801575 TCGAGTATTATGTGTGTCAGCATTA 58.198 36.000 0.00 0.00 0.00 1.90
346 347 6.695713 TCGAGTATTATGTGTGTCAGCATTAC 59.304 38.462 0.00 0.00 0.00 1.89
347 348 6.074302 CGAGTATTATGTGTGTCAGCATTACC 60.074 42.308 0.00 0.00 0.00 2.85
348 349 5.753438 AGTATTATGTGTGTCAGCATTACCG 59.247 40.000 0.00 0.00 0.00 4.02
349 350 1.737838 ATGTGTGTCAGCATTACCGG 58.262 50.000 0.00 0.00 0.00 5.28
350 351 0.394938 TGTGTGTCAGCATTACCGGT 59.605 50.000 13.98 13.98 0.00 5.28
351 352 1.076332 GTGTGTCAGCATTACCGGTC 58.924 55.000 12.40 0.00 0.00 4.79
352 353 0.036765 TGTGTCAGCATTACCGGTCC 60.037 55.000 12.40 0.00 0.00 4.46
353 354 0.036765 GTGTCAGCATTACCGGTCCA 60.037 55.000 12.40 0.00 0.00 4.02
354 355 0.249120 TGTCAGCATTACCGGTCCAG 59.751 55.000 12.40 2.42 0.00 3.86
355 356 0.462047 GTCAGCATTACCGGTCCAGG 60.462 60.000 12.40 1.22 37.30 4.45
356 357 1.153168 CAGCATTACCGGTCCAGGG 60.153 63.158 12.40 0.00 35.02 4.45
357 358 1.306654 AGCATTACCGGTCCAGGGA 60.307 57.895 12.40 0.00 35.02 4.20
358 359 0.694444 AGCATTACCGGTCCAGGGAT 60.694 55.000 12.40 0.00 35.02 3.85
359 360 0.535102 GCATTACCGGTCCAGGGATG 60.535 60.000 12.40 8.39 34.29 3.51
360 361 1.128200 CATTACCGGTCCAGGGATGA 58.872 55.000 12.40 0.00 33.53 2.92
361 362 1.129058 ATTACCGGTCCAGGGATGAC 58.871 55.000 12.40 0.00 35.02 3.06
362 363 0.252330 TTACCGGTCCAGGGATGACA 60.252 55.000 12.40 0.00 34.36 3.58
363 364 0.974010 TACCGGTCCAGGGATGACAC 60.974 60.000 12.40 0.00 34.36 3.67
364 365 1.990060 CCGGTCCAGGGATGACACT 60.990 63.158 0.00 0.00 34.36 3.55
365 366 1.219124 CGGTCCAGGGATGACACTG 59.781 63.158 0.00 0.00 46.15 3.66
372 373 2.847327 AGGGATGACACTGAACACAG 57.153 50.000 0.00 0.00 37.63 3.66
373 374 2.329267 AGGGATGACACTGAACACAGA 58.671 47.619 0.00 0.00 35.80 3.41
374 375 2.301296 AGGGATGACACTGAACACAGAG 59.699 50.000 0.00 0.00 35.80 3.35
375 376 2.300152 GGGATGACACTGAACACAGAGA 59.700 50.000 0.00 0.00 35.80 3.10
376 377 3.321497 GGATGACACTGAACACAGAGAC 58.679 50.000 0.00 0.00 35.80 3.36
377 378 3.006323 GGATGACACTGAACACAGAGACT 59.994 47.826 0.00 0.00 35.80 3.24
378 379 4.502259 GGATGACACTGAACACAGAGACTT 60.502 45.833 0.00 0.00 35.80 3.01
379 380 3.785486 TGACACTGAACACAGAGACTTG 58.215 45.455 0.00 0.00 35.80 3.16
380 381 3.447229 TGACACTGAACACAGAGACTTGA 59.553 43.478 0.00 0.00 35.80 3.02
381 382 3.786635 ACACTGAACACAGAGACTTGAC 58.213 45.455 0.00 0.00 35.80 3.18
382 383 3.126831 CACTGAACACAGAGACTTGACC 58.873 50.000 0.00 0.00 35.80 4.02
383 384 2.223829 ACTGAACACAGAGACTTGACCG 60.224 50.000 0.00 0.00 35.80 4.79
384 385 1.754803 TGAACACAGAGACTTGACCGT 59.245 47.619 0.00 0.00 0.00 4.83
385 386 2.223735 TGAACACAGAGACTTGACCGTC 60.224 50.000 0.00 0.00 0.00 4.79
386 387 1.693627 ACACAGAGACTTGACCGTCT 58.306 50.000 0.00 0.00 46.39 4.18
387 388 1.338337 ACACAGAGACTTGACCGTCTG 59.662 52.381 0.00 0.00 43.91 3.51
388 389 1.609072 CACAGAGACTTGACCGTCTGA 59.391 52.381 5.24 0.00 43.91 3.27
389 390 1.883275 ACAGAGACTTGACCGTCTGAG 59.117 52.381 5.24 0.97 43.91 3.35
390 391 2.155279 CAGAGACTTGACCGTCTGAGA 58.845 52.381 0.00 0.00 43.91 3.27
391 392 2.752354 CAGAGACTTGACCGTCTGAGAT 59.248 50.000 0.00 0.00 43.91 2.75
392 393 3.192422 CAGAGACTTGACCGTCTGAGATT 59.808 47.826 0.00 0.00 43.91 2.40
393 394 3.192422 AGAGACTTGACCGTCTGAGATTG 59.808 47.826 0.00 0.00 43.91 2.67
394 395 2.232452 AGACTTGACCGTCTGAGATTGG 59.768 50.000 0.00 2.57 42.39 3.16
395 396 1.276421 ACTTGACCGTCTGAGATTGGG 59.724 52.381 8.31 2.76 0.00 4.12
396 397 1.276421 CTTGACCGTCTGAGATTGGGT 59.724 52.381 8.31 5.73 0.00 4.51
397 398 0.895530 TGACCGTCTGAGATTGGGTC 59.104 55.000 17.86 17.86 45.75 4.46
398 399 0.179134 GACCGTCTGAGATTGGGTCG 60.179 60.000 12.40 0.00 37.96 4.79
399 400 1.519455 CCGTCTGAGATTGGGTCGC 60.519 63.158 0.00 0.00 0.00 5.19
400 401 1.513158 CGTCTGAGATTGGGTCGCT 59.487 57.895 0.00 0.00 0.00 4.93
401 402 0.738975 CGTCTGAGATTGGGTCGCTA 59.261 55.000 0.00 0.00 0.00 4.26
402 403 1.534175 CGTCTGAGATTGGGTCGCTAC 60.534 57.143 0.00 0.00 0.00 3.58
403 404 1.476891 GTCTGAGATTGGGTCGCTACA 59.523 52.381 0.00 0.00 0.00 2.74
404 405 2.101582 GTCTGAGATTGGGTCGCTACAT 59.898 50.000 0.00 0.00 0.00 2.29
413 414 3.028130 TGGGTCGCTACATGTTCTATGA 58.972 45.455 2.30 0.00 0.00 2.15
415 416 3.181479 GGGTCGCTACATGTTCTATGACA 60.181 47.826 2.30 0.00 0.00 3.58
463 465 6.108015 TCATCACATGATCATTGAAGACGAA 58.892 36.000 18.28 3.22 33.59 3.85
464 466 6.594937 TCATCACATGATCATTGAAGACGAAA 59.405 34.615 18.28 2.97 33.59 3.46
479 481 1.480137 ACGAAAGAGAGAGATGCCTGG 59.520 52.381 0.00 0.00 0.00 4.45
483 485 2.493099 AGAGAGAGATGCCTGGGAAT 57.507 50.000 0.00 0.00 0.00 3.01
492 494 4.990526 AGATGCCTGGGAATTTTCGATAT 58.009 39.130 0.00 0.00 0.00 1.63
503 521 6.192360 GGAATTTTCGATATTGGTTGAGTCG 58.808 40.000 0.00 0.00 0.00 4.18
520 538 6.465439 TGAGTCGGAGTATGATACAAACAT 57.535 37.500 5.28 0.00 0.00 2.71
524 542 7.500992 AGTCGGAGTATGATACAAACATGATT 58.499 34.615 5.28 0.00 0.00 2.57
543 561 7.232127 ACATGATTTTGACATTCTTTGAGGAGT 59.768 33.333 0.00 0.00 0.00 3.85
882 961 1.831736 AGTGGATCGGTTAGAGTTGGG 59.168 52.381 0.00 0.00 0.00 4.12
888 967 1.829222 TCGGTTAGAGTTGGGCTAAGG 59.171 52.381 0.00 0.00 0.00 2.69
889 968 1.553704 CGGTTAGAGTTGGGCTAAGGT 59.446 52.381 0.00 0.00 0.00 3.50
891 970 2.838813 GGTTAGAGTTGGGCTAAGGTCT 59.161 50.000 1.72 1.72 0.00 3.85
893 972 1.280457 AGAGTTGGGCTAAGGTCTGG 58.720 55.000 0.00 0.00 0.00 3.86
894 973 0.984995 GAGTTGGGCTAAGGTCTGGT 59.015 55.000 0.00 0.00 0.00 4.00
895 974 1.351350 GAGTTGGGCTAAGGTCTGGTT 59.649 52.381 0.00 0.00 0.00 3.67
1009 1090 3.197790 CACTTCCGATGCCGCCAG 61.198 66.667 0.00 0.00 0.00 4.85
1244 1325 3.441290 CTTCTCCCCGCTCGTCGT 61.441 66.667 0.00 0.00 36.19 4.34
1431 1512 1.754803 CACTTCCCCTATCACTACGCA 59.245 52.381 0.00 0.00 0.00 5.24
1520 1601 1.269012 CATCCAAGCCCCAACAACAT 58.731 50.000 0.00 0.00 0.00 2.71
1671 1752 4.344865 GCCCCTTCGAACCAGGCA 62.345 66.667 18.76 0.00 43.32 4.75
1673 1754 2.747855 CCCTTCGAACCAGGCAGC 60.748 66.667 0.00 0.00 0.00 5.25
1728 1809 2.743664 CACCAGATTCGACAGATTGCAA 59.256 45.455 0.00 0.00 0.00 4.08
1845 1926 3.596214 GGTGAACAAGATCGGTGTGTAT 58.404 45.455 5.93 0.00 0.00 2.29
2065 2146 0.310854 CAACGTTGAAGGGCTTGGAC 59.689 55.000 23.90 0.00 0.00 4.02
2144 2225 6.241207 TCCACGTCTTTTCTTTTGATGATC 57.759 37.500 0.00 0.00 0.00 2.92
2150 2231 6.401047 CGTCTTTTCTTTTGATGATCGTAGCA 60.401 38.462 0.00 0.00 0.00 3.49
2282 2363 6.183360 CGCATTGTACGGATTAATCATGCTAT 60.183 38.462 23.12 12.83 0.00 2.97
2311 2392 5.091431 GTGAATATTTGTGCTTGTGCTCTC 58.909 41.667 0.00 0.00 40.48 3.20
2350 2431 9.787532 GATATCTATGTGCATCTCTCTTAAGAC 57.212 37.037 0.00 0.00 0.00 3.01
2353 2434 5.674052 ATGTGCATCTCTCTTAAGACTGT 57.326 39.130 0.00 0.00 0.00 3.55
2362 2443 2.037772 CTCTTAAGACTGTGTGGCCTGT 59.962 50.000 3.32 0.00 0.00 4.00
2427 2508 2.965147 ACCTTAGCTTGCCAATTGTTGT 59.035 40.909 4.43 0.00 0.00 3.32
2435 2516 4.794169 CTTGCCAATTGTTGTACTGTACC 58.206 43.478 14.91 1.78 0.00 3.34
2437 2518 2.413634 GCCAATTGTTGTACTGTACCGC 60.414 50.000 14.91 8.37 0.00 5.68
2774 2861 6.728200 TCTTTCTTGAAAGTAGCACAATGTG 58.272 36.000 18.84 9.36 36.51 3.21
2816 2903 8.747471 TGACATGATTGTTATGCCTTAATTTCA 58.253 29.630 0.00 0.00 35.79 2.69
2925 3012 2.416547 CACAGGGTGATTTGCTAGAACG 59.583 50.000 0.00 0.00 35.23 3.95
2926 3013 2.301870 ACAGGGTGATTTGCTAGAACGA 59.698 45.455 0.00 0.00 0.00 3.85
2985 3072 5.473162 CACAATTCTGTCTACAAATCCACCA 59.527 40.000 0.00 0.00 31.64 4.17
3139 3227 6.115446 TGAAACATGGGAGAAGATGTACATC 58.885 40.000 25.47 25.47 38.09 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.035139 GCATATTTGGCTGGTGGAGG 58.965 55.000 0.00 0.00 0.00 4.30
1 2 1.766494 TGCATATTTGGCTGGTGGAG 58.234 50.000 0.00 0.00 0.00 3.86
2 3 2.033372 CATGCATATTTGGCTGGTGGA 58.967 47.619 0.00 0.00 0.00 4.02
3 4 1.758280 ACATGCATATTTGGCTGGTGG 59.242 47.619 0.00 0.00 0.00 4.61
4 5 3.633525 ACTACATGCATATTTGGCTGGTG 59.366 43.478 0.00 0.00 0.00 4.17
5 6 3.633525 CACTACATGCATATTTGGCTGGT 59.366 43.478 0.00 0.00 0.00 4.00
6 7 3.884693 TCACTACATGCATATTTGGCTGG 59.115 43.478 0.00 0.00 0.00 4.85
7 8 5.700722 ATCACTACATGCATATTTGGCTG 57.299 39.130 0.00 0.00 0.00 4.85
8 9 5.413833 GCTATCACTACATGCATATTTGGCT 59.586 40.000 0.00 0.00 0.00 4.75
9 10 5.392380 GGCTATCACTACATGCATATTTGGC 60.392 44.000 0.00 0.00 0.00 4.52
10 11 5.942236 AGGCTATCACTACATGCATATTTGG 59.058 40.000 0.00 0.00 0.00 3.28
11 12 7.444629 AAGGCTATCACTACATGCATATTTG 57.555 36.000 0.00 0.00 0.00 2.32
12 13 9.003658 GTAAAGGCTATCACTACATGCATATTT 57.996 33.333 0.00 0.00 0.00 1.40
13 14 7.607991 GGTAAAGGCTATCACTACATGCATATT 59.392 37.037 0.00 0.00 0.00 1.28
14 15 7.038017 AGGTAAAGGCTATCACTACATGCATAT 60.038 37.037 0.00 0.00 0.00 1.78
15 16 6.270000 AGGTAAAGGCTATCACTACATGCATA 59.730 38.462 0.00 0.00 0.00 3.14
16 17 5.072329 AGGTAAAGGCTATCACTACATGCAT 59.928 40.000 0.00 0.00 0.00 3.96
17 18 4.408921 AGGTAAAGGCTATCACTACATGCA 59.591 41.667 0.00 0.00 0.00 3.96
18 19 4.752101 CAGGTAAAGGCTATCACTACATGC 59.248 45.833 0.00 0.00 0.00 4.06
19 20 5.918608 ACAGGTAAAGGCTATCACTACATG 58.081 41.667 0.00 0.00 32.19 3.21
20 21 5.070580 GGACAGGTAAAGGCTATCACTACAT 59.929 44.000 0.00 0.00 0.00 2.29
21 22 4.404715 GGACAGGTAAAGGCTATCACTACA 59.595 45.833 0.00 0.00 0.00 2.74
22 23 4.404715 TGGACAGGTAAAGGCTATCACTAC 59.595 45.833 0.00 0.00 0.00 2.73
23 24 4.616553 TGGACAGGTAAAGGCTATCACTA 58.383 43.478 0.00 0.00 0.00 2.74
24 25 3.450904 TGGACAGGTAAAGGCTATCACT 58.549 45.455 0.00 0.00 0.00 3.41
25 26 3.906720 TGGACAGGTAAAGGCTATCAC 57.093 47.619 0.00 0.00 0.00 3.06
26 27 4.780815 CAATGGACAGGTAAAGGCTATCA 58.219 43.478 0.00 0.00 0.00 2.15
27 28 3.565902 GCAATGGACAGGTAAAGGCTATC 59.434 47.826 0.00 0.00 0.00 2.08
28 29 3.203040 AGCAATGGACAGGTAAAGGCTAT 59.797 43.478 0.00 0.00 0.00 2.97
29 30 2.576191 AGCAATGGACAGGTAAAGGCTA 59.424 45.455 0.00 0.00 0.00 3.93
30 31 1.355720 AGCAATGGACAGGTAAAGGCT 59.644 47.619 0.00 0.00 0.00 4.58
31 32 1.839424 AGCAATGGACAGGTAAAGGC 58.161 50.000 0.00 0.00 0.00 4.35
32 33 5.010282 AGTAAAGCAATGGACAGGTAAAGG 58.990 41.667 0.00 0.00 0.00 3.11
33 34 5.473504 ACAGTAAAGCAATGGACAGGTAAAG 59.526 40.000 0.00 0.00 0.00 1.85
34 35 5.240623 CACAGTAAAGCAATGGACAGGTAAA 59.759 40.000 0.00 0.00 0.00 2.01
35 36 4.759693 CACAGTAAAGCAATGGACAGGTAA 59.240 41.667 0.00 0.00 0.00 2.85
36 37 4.202419 ACACAGTAAAGCAATGGACAGGTA 60.202 41.667 0.00 0.00 0.00 3.08
37 38 3.149196 CACAGTAAAGCAATGGACAGGT 58.851 45.455 0.00 0.00 0.00 4.00
38 39 3.149196 ACACAGTAAAGCAATGGACAGG 58.851 45.455 0.00 0.00 0.00 4.00
39 40 4.836125 AACACAGTAAAGCAATGGACAG 57.164 40.909 0.00 0.00 0.00 3.51
40 41 6.892658 AATAACACAGTAAAGCAATGGACA 57.107 33.333 0.00 0.00 0.00 4.02
41 42 7.359181 GCAAAATAACACAGTAAAGCAATGGAC 60.359 37.037 0.00 0.00 0.00 4.02
42 43 6.644592 GCAAAATAACACAGTAAAGCAATGGA 59.355 34.615 0.00 0.00 0.00 3.41
43 44 6.128580 GGCAAAATAACACAGTAAAGCAATGG 60.129 38.462 0.00 0.00 0.00 3.16
44 45 6.423302 TGGCAAAATAACACAGTAAAGCAATG 59.577 34.615 0.00 0.00 0.00 2.82
45 46 6.520272 TGGCAAAATAACACAGTAAAGCAAT 58.480 32.000 0.00 0.00 0.00 3.56
46 47 5.907207 TGGCAAAATAACACAGTAAAGCAA 58.093 33.333 0.00 0.00 0.00 3.91
47 48 5.521906 TGGCAAAATAACACAGTAAAGCA 57.478 34.783 0.00 0.00 0.00 3.91
48 49 4.385748 GCTGGCAAAATAACACAGTAAAGC 59.614 41.667 0.00 0.00 0.00 3.51
49 50 5.527951 TGCTGGCAAAATAACACAGTAAAG 58.472 37.500 0.00 0.00 0.00 1.85
50 51 5.521906 TGCTGGCAAAATAACACAGTAAA 57.478 34.783 0.00 0.00 0.00 2.01
51 52 5.720371 ATGCTGGCAAAATAACACAGTAA 57.280 34.783 0.00 0.00 0.00 2.24
52 53 7.403312 AATATGCTGGCAAAATAACACAGTA 57.597 32.000 0.00 0.00 0.00 2.74
53 54 5.920193 ATATGCTGGCAAAATAACACAGT 57.080 34.783 0.00 0.00 0.00 3.55
54 55 6.812656 TGAAATATGCTGGCAAAATAACACAG 59.187 34.615 0.00 0.00 0.00 3.66
55 56 6.695429 TGAAATATGCTGGCAAAATAACACA 58.305 32.000 0.00 0.00 0.00 3.72
56 57 7.278424 ACATGAAATATGCTGGCAAAATAACAC 59.722 33.333 0.00 0.00 0.00 3.32
57 58 7.278203 CACATGAAATATGCTGGCAAAATAACA 59.722 33.333 0.00 2.29 0.00 2.41
58 59 7.623770 CACATGAAATATGCTGGCAAAATAAC 58.376 34.615 0.00 0.00 0.00 1.89
59 60 6.258287 GCACATGAAATATGCTGGCAAAATAA 59.742 34.615 0.00 0.00 36.40 1.40
60 61 5.754406 GCACATGAAATATGCTGGCAAAATA 59.246 36.000 0.00 0.00 36.40 1.40
61 62 4.573201 GCACATGAAATATGCTGGCAAAAT 59.427 37.500 0.00 0.00 36.40 1.82
62 63 3.933955 GCACATGAAATATGCTGGCAAAA 59.066 39.130 0.00 0.00 36.40 2.44
63 64 3.523547 GCACATGAAATATGCTGGCAAA 58.476 40.909 0.00 0.00 36.40 3.68
64 65 3.167921 GCACATGAAATATGCTGGCAA 57.832 42.857 0.00 0.00 36.40 4.52
65 66 2.875087 GCACATGAAATATGCTGGCA 57.125 45.000 0.00 0.00 36.40 4.92
70 71 2.287188 CGGGTCAGCACATGAAATATGC 60.287 50.000 0.00 0.00 40.43 3.14
71 72 2.945008 ACGGGTCAGCACATGAAATATG 59.055 45.455 0.00 0.00 40.43 1.78
72 73 3.281727 ACGGGTCAGCACATGAAATAT 57.718 42.857 0.00 0.00 40.43 1.28
73 74 2.779755 ACGGGTCAGCACATGAAATA 57.220 45.000 0.00 0.00 40.43 1.40
74 75 1.909700 AACGGGTCAGCACATGAAAT 58.090 45.000 0.00 0.00 40.43 2.17
75 76 1.686355 AAACGGGTCAGCACATGAAA 58.314 45.000 0.00 0.00 40.43 2.69
76 77 1.606668 GAAAACGGGTCAGCACATGAA 59.393 47.619 0.00 0.00 40.43 2.57
77 78 1.234821 GAAAACGGGTCAGCACATGA 58.765 50.000 0.00 0.00 34.79 3.07
78 79 0.110238 CGAAAACGGGTCAGCACATG 60.110 55.000 0.00 0.00 0.00 3.21
79 80 1.234615 CCGAAAACGGGTCAGCACAT 61.235 55.000 0.00 0.00 0.00 3.21
80 81 1.890041 CCGAAAACGGGTCAGCACA 60.890 57.895 0.00 0.00 0.00 4.57
81 82 2.613506 CCCGAAAACGGGTCAGCAC 61.614 63.158 18.03 0.00 43.90 4.40
82 83 2.281208 CCCGAAAACGGGTCAGCA 60.281 61.111 18.03 0.00 43.90 4.41
89 90 2.050442 GTTGCAGCCCGAAAACGG 60.050 61.111 0.00 0.00 0.00 4.44
90 91 2.426752 CGTTGCAGCCCGAAAACG 60.427 61.111 1.06 1.06 39.35 3.60
91 92 0.519961 ATACGTTGCAGCCCGAAAAC 59.480 50.000 8.43 0.00 0.00 2.43
92 93 0.800012 GATACGTTGCAGCCCGAAAA 59.200 50.000 8.43 0.00 0.00 2.29
93 94 0.320858 TGATACGTTGCAGCCCGAAA 60.321 50.000 8.43 0.00 0.00 3.46
94 95 0.107897 ATGATACGTTGCAGCCCGAA 60.108 50.000 8.43 0.00 0.00 4.30
95 96 0.747852 TATGATACGTTGCAGCCCGA 59.252 50.000 8.43 0.00 0.00 5.14
96 97 1.795768 ATATGATACGTTGCAGCCCG 58.204 50.000 0.00 0.00 0.00 6.13
97 98 2.350772 GCAATATGATACGTTGCAGCCC 60.351 50.000 0.00 0.00 45.57 5.19
98 99 2.921126 GCAATATGATACGTTGCAGCC 58.079 47.619 0.00 0.00 45.57 4.85
102 103 5.409643 AAGTCTGCAATATGATACGTTGC 57.590 39.130 0.00 4.30 46.24 4.17
103 104 7.463544 TGAAAAGTCTGCAATATGATACGTTG 58.536 34.615 0.00 0.00 0.00 4.10
104 105 7.549134 TCTGAAAAGTCTGCAATATGATACGTT 59.451 33.333 0.00 0.00 0.00 3.99
105 106 7.010552 GTCTGAAAAGTCTGCAATATGATACGT 59.989 37.037 0.00 0.00 0.00 3.57
106 107 7.340699 GTCTGAAAAGTCTGCAATATGATACG 58.659 38.462 0.00 0.00 0.00 3.06
107 108 7.222805 TCGTCTGAAAAGTCTGCAATATGATAC 59.777 37.037 0.00 0.00 0.00 2.24
108 109 7.264947 TCGTCTGAAAAGTCTGCAATATGATA 58.735 34.615 0.00 0.00 0.00 2.15
109 110 6.108687 TCGTCTGAAAAGTCTGCAATATGAT 58.891 36.000 0.00 0.00 0.00 2.45
110 111 5.478407 TCGTCTGAAAAGTCTGCAATATGA 58.522 37.500 0.00 0.00 0.00 2.15
111 112 5.220548 CCTCGTCTGAAAAGTCTGCAATATG 60.221 44.000 0.00 0.00 0.00 1.78
112 113 4.872691 CCTCGTCTGAAAAGTCTGCAATAT 59.127 41.667 0.00 0.00 0.00 1.28
113 114 4.021456 TCCTCGTCTGAAAAGTCTGCAATA 60.021 41.667 0.00 0.00 0.00 1.90
114 115 3.070018 CCTCGTCTGAAAAGTCTGCAAT 58.930 45.455 0.00 0.00 0.00 3.56
115 116 2.102420 TCCTCGTCTGAAAAGTCTGCAA 59.898 45.455 0.00 0.00 0.00 4.08
116 117 1.686587 TCCTCGTCTGAAAAGTCTGCA 59.313 47.619 0.00 0.00 0.00 4.41
117 118 2.288518 ACTCCTCGTCTGAAAAGTCTGC 60.289 50.000 0.00 0.00 0.00 4.26
118 119 3.651803 ACTCCTCGTCTGAAAAGTCTG 57.348 47.619 0.00 0.00 0.00 3.51
119 120 5.071370 TCTTACTCCTCGTCTGAAAAGTCT 58.929 41.667 0.00 0.00 0.00 3.24
120 121 5.373981 TCTTACTCCTCGTCTGAAAAGTC 57.626 43.478 0.00 0.00 0.00 3.01
121 122 5.715070 CATCTTACTCCTCGTCTGAAAAGT 58.285 41.667 0.00 0.00 0.00 2.66
122 123 4.564769 GCATCTTACTCCTCGTCTGAAAAG 59.435 45.833 0.00 0.00 0.00 2.27
123 124 4.495422 GCATCTTACTCCTCGTCTGAAAA 58.505 43.478 0.00 0.00 0.00 2.29
124 125 3.119101 GGCATCTTACTCCTCGTCTGAAA 60.119 47.826 0.00 0.00 0.00 2.69
125 126 2.427453 GGCATCTTACTCCTCGTCTGAA 59.573 50.000 0.00 0.00 0.00 3.02
126 127 2.025155 GGCATCTTACTCCTCGTCTGA 58.975 52.381 0.00 0.00 0.00 3.27
127 128 1.268794 CGGCATCTTACTCCTCGTCTG 60.269 57.143 0.00 0.00 0.00 3.51
128 129 1.025812 CGGCATCTTACTCCTCGTCT 58.974 55.000 0.00 0.00 0.00 4.18
129 130 0.739561 ACGGCATCTTACTCCTCGTC 59.260 55.000 0.00 0.00 0.00 4.20
130 131 1.948145 CTACGGCATCTTACTCCTCGT 59.052 52.381 0.00 0.00 0.00 4.18
131 132 1.267261 CCTACGGCATCTTACTCCTCG 59.733 57.143 0.00 0.00 0.00 4.63
132 133 2.293955 GACCTACGGCATCTTACTCCTC 59.706 54.545 0.00 0.00 0.00 3.71
133 134 2.308690 GACCTACGGCATCTTACTCCT 58.691 52.381 0.00 0.00 0.00 3.69
134 135 1.001597 CGACCTACGGCATCTTACTCC 60.002 57.143 0.00 0.00 38.46 3.85
135 136 2.402640 CGACCTACGGCATCTTACTC 57.597 55.000 0.00 0.00 38.46 2.59
147 148 2.412089 GAGTGCATGACAAACGACCTAC 59.588 50.000 0.00 0.00 0.00 3.18
148 149 2.683968 GAGTGCATGACAAACGACCTA 58.316 47.619 0.00 0.00 0.00 3.08
149 150 1.512926 GAGTGCATGACAAACGACCT 58.487 50.000 0.00 0.00 0.00 3.85
150 151 0.163788 CGAGTGCATGACAAACGACC 59.836 55.000 0.00 0.00 33.00 4.79
151 152 0.163788 CCGAGTGCATGACAAACGAC 59.836 55.000 0.00 0.00 33.00 4.34
152 153 1.565156 GCCGAGTGCATGACAAACGA 61.565 55.000 0.00 0.00 40.77 3.85
153 154 1.154413 GCCGAGTGCATGACAAACG 60.154 57.895 0.00 3.93 40.77 3.60
154 155 1.438651 TAGCCGAGTGCATGACAAAC 58.561 50.000 0.00 0.00 44.83 2.93
155 156 2.009051 CATAGCCGAGTGCATGACAAA 58.991 47.619 0.00 0.00 44.83 2.83
156 157 1.655484 CATAGCCGAGTGCATGACAA 58.345 50.000 0.00 0.00 44.83 3.18
157 158 0.811219 GCATAGCCGAGTGCATGACA 60.811 55.000 0.00 0.00 44.83 3.58
158 159 1.502163 GGCATAGCCGAGTGCATGAC 61.502 60.000 0.00 0.00 44.83 3.06
159 160 1.227645 GGCATAGCCGAGTGCATGA 60.228 57.895 0.00 0.00 44.83 3.07
160 161 3.337619 GGCATAGCCGAGTGCATG 58.662 61.111 0.00 0.00 44.83 4.06
169 170 0.392461 TCAACTCCAACGGCATAGCC 60.392 55.000 0.00 0.00 46.75 3.93
170 171 1.331756 CATCAACTCCAACGGCATAGC 59.668 52.381 0.00 0.00 0.00 2.97
171 172 1.942657 CCATCAACTCCAACGGCATAG 59.057 52.381 0.00 0.00 0.00 2.23
172 173 1.557371 TCCATCAACTCCAACGGCATA 59.443 47.619 0.00 0.00 0.00 3.14
173 174 0.327924 TCCATCAACTCCAACGGCAT 59.672 50.000 0.00 0.00 0.00 4.40
174 175 0.605319 GTCCATCAACTCCAACGGCA 60.605 55.000 0.00 0.00 0.00 5.69
175 176 0.321653 AGTCCATCAACTCCAACGGC 60.322 55.000 0.00 0.00 0.00 5.68
176 177 1.001974 TGAGTCCATCAACTCCAACGG 59.998 52.381 1.88 0.00 44.17 4.44
177 178 2.069273 GTGAGTCCATCAACTCCAACG 58.931 52.381 1.88 0.00 44.17 4.10
178 179 3.409026 AGTGAGTCCATCAACTCCAAC 57.591 47.619 1.88 0.00 44.17 3.77
179 180 4.437682 AAAGTGAGTCCATCAACTCCAA 57.562 40.909 1.88 0.00 44.17 3.53
180 181 4.103153 AGAAAAGTGAGTCCATCAACTCCA 59.897 41.667 1.88 0.00 44.17 3.86
181 182 4.646572 AGAAAAGTGAGTCCATCAACTCC 58.353 43.478 1.88 0.00 44.17 3.85
182 183 5.180304 GGAAGAAAAGTGAGTCCATCAACTC 59.820 44.000 0.00 0.00 44.87 3.01
183 184 5.066593 GGAAGAAAAGTGAGTCCATCAACT 58.933 41.667 0.00 0.00 40.43 3.16
184 185 4.821805 TGGAAGAAAAGTGAGTCCATCAAC 59.178 41.667 0.00 0.00 40.43 3.18
185 186 5.047566 TGGAAGAAAAGTGAGTCCATCAA 57.952 39.130 0.00 0.00 40.43 2.57
186 187 4.705110 TGGAAGAAAAGTGAGTCCATCA 57.295 40.909 0.00 0.00 33.43 3.07
187 188 4.083057 GCTTGGAAGAAAAGTGAGTCCATC 60.083 45.833 0.00 0.00 38.16 3.51
188 189 3.823304 GCTTGGAAGAAAAGTGAGTCCAT 59.177 43.478 0.00 0.00 38.16 3.41
189 190 3.214328 GCTTGGAAGAAAAGTGAGTCCA 58.786 45.455 0.00 0.00 36.59 4.02
190 191 2.554462 GGCTTGGAAGAAAAGTGAGTCC 59.446 50.000 0.00 0.00 0.00 3.85
191 192 3.481453 AGGCTTGGAAGAAAAGTGAGTC 58.519 45.455 0.00 0.00 0.00 3.36
192 193 3.584733 AGGCTTGGAAGAAAAGTGAGT 57.415 42.857 0.00 0.00 0.00 3.41
193 194 3.254411 GGAAGGCTTGGAAGAAAAGTGAG 59.746 47.826 3.46 0.00 0.00 3.51
194 195 3.222603 GGAAGGCTTGGAAGAAAAGTGA 58.777 45.455 3.46 0.00 0.00 3.41
195 196 2.958355 TGGAAGGCTTGGAAGAAAAGTG 59.042 45.455 3.46 0.00 0.00 3.16
196 197 3.312736 TGGAAGGCTTGGAAGAAAAGT 57.687 42.857 3.46 0.00 0.00 2.66
197 198 4.039609 ACAATGGAAGGCTTGGAAGAAAAG 59.960 41.667 3.46 0.00 0.00 2.27
198 199 3.966665 ACAATGGAAGGCTTGGAAGAAAA 59.033 39.130 3.46 0.00 0.00 2.29
199 200 3.575805 ACAATGGAAGGCTTGGAAGAAA 58.424 40.909 3.46 0.00 0.00 2.52
200 201 3.243359 ACAATGGAAGGCTTGGAAGAA 57.757 42.857 3.46 0.00 0.00 2.52
201 202 2.978156 ACAATGGAAGGCTTGGAAGA 57.022 45.000 3.46 0.00 0.00 2.87
202 203 4.201950 CGATAACAATGGAAGGCTTGGAAG 60.202 45.833 3.46 0.00 0.00 3.46
203 204 3.694072 CGATAACAATGGAAGGCTTGGAA 59.306 43.478 3.46 0.00 0.00 3.53
204 205 3.278574 CGATAACAATGGAAGGCTTGGA 58.721 45.455 3.46 0.00 0.00 3.53
205 206 3.016736 ACGATAACAATGGAAGGCTTGG 58.983 45.455 3.46 0.00 0.00 3.61
206 207 4.701956 AACGATAACAATGGAAGGCTTG 57.298 40.909 3.46 0.00 0.00 4.01
207 208 5.722021 AAAACGATAACAATGGAAGGCTT 57.278 34.783 0.00 0.00 0.00 4.35
208 209 5.722021 AAAAACGATAACAATGGAAGGCT 57.278 34.783 0.00 0.00 0.00 4.58
209 210 6.848451 TCTAAAAACGATAACAATGGAAGGC 58.152 36.000 0.00 0.00 0.00 4.35
210 211 7.915397 CCATCTAAAAACGATAACAATGGAAGG 59.085 37.037 0.00 0.00 34.40 3.46
211 212 8.458843 ACCATCTAAAAACGATAACAATGGAAG 58.541 33.333 4.67 0.00 35.73 3.46
212 213 8.343168 ACCATCTAAAAACGATAACAATGGAA 57.657 30.769 4.67 0.00 35.73 3.53
213 214 7.827236 AGACCATCTAAAAACGATAACAATGGA 59.173 33.333 4.67 0.00 35.73 3.41
214 215 7.985476 AGACCATCTAAAAACGATAACAATGG 58.015 34.615 0.00 0.00 37.68 3.16
218 219 8.662141 GCTTAAGACCATCTAAAAACGATAACA 58.338 33.333 6.67 0.00 0.00 2.41
219 220 8.121086 GGCTTAAGACCATCTAAAAACGATAAC 58.879 37.037 6.67 0.00 0.00 1.89
220 221 7.825270 TGGCTTAAGACCATCTAAAAACGATAA 59.175 33.333 5.69 0.00 30.29 1.75
221 222 7.332557 TGGCTTAAGACCATCTAAAAACGATA 58.667 34.615 5.69 0.00 30.29 2.92
222 223 6.177610 TGGCTTAAGACCATCTAAAAACGAT 58.822 36.000 5.69 0.00 30.29 3.73
223 224 5.553123 TGGCTTAAGACCATCTAAAAACGA 58.447 37.500 5.69 0.00 30.29 3.85
224 225 5.873179 TGGCTTAAGACCATCTAAAAACG 57.127 39.130 5.69 0.00 30.29 3.60
252 253 9.911788 ATGTCTCAAAGGATAACTCATTACAAT 57.088 29.630 0.00 0.00 0.00 2.71
253 254 9.739276 AATGTCTCAAAGGATAACTCATTACAA 57.261 29.630 0.00 0.00 0.00 2.41
254 255 9.383519 GAATGTCTCAAAGGATAACTCATTACA 57.616 33.333 0.00 0.00 0.00 2.41
255 256 8.543774 CGAATGTCTCAAAGGATAACTCATTAC 58.456 37.037 0.00 0.00 0.00 1.89
256 257 8.474831 TCGAATGTCTCAAAGGATAACTCATTA 58.525 33.333 0.00 0.00 0.00 1.90
257 258 7.331026 TCGAATGTCTCAAAGGATAACTCATT 58.669 34.615 0.00 0.00 0.00 2.57
258 259 6.878317 TCGAATGTCTCAAAGGATAACTCAT 58.122 36.000 0.00 0.00 0.00 2.90
259 260 6.280855 TCGAATGTCTCAAAGGATAACTCA 57.719 37.500 0.00 0.00 0.00 3.41
260 261 6.758886 ACATCGAATGTCTCAAAGGATAACTC 59.241 38.462 0.00 0.00 39.92 3.01
261 262 6.644347 ACATCGAATGTCTCAAAGGATAACT 58.356 36.000 0.00 0.00 39.92 2.24
262 263 6.910536 ACATCGAATGTCTCAAAGGATAAC 57.089 37.500 0.00 0.00 39.92 1.89
265 266 9.265901 CTTATTACATCGAATGTCTCAAAGGAT 57.734 33.333 4.15 0.00 43.67 3.24
266 267 8.258007 ACTTATTACATCGAATGTCTCAAAGGA 58.742 33.333 4.15 0.00 43.67 3.36
267 268 8.331022 CACTTATTACATCGAATGTCTCAAAGG 58.669 37.037 4.15 0.00 43.67 3.11
268 269 8.873830 ACACTTATTACATCGAATGTCTCAAAG 58.126 33.333 4.15 7.03 43.67 2.77
269 270 8.655970 CACACTTATTACATCGAATGTCTCAAA 58.344 33.333 4.15 0.00 43.67 2.69
270 271 7.817478 ACACACTTATTACATCGAATGTCTCAA 59.183 33.333 4.15 0.00 43.67 3.02
271 272 7.275560 CACACACTTATTACATCGAATGTCTCA 59.724 37.037 4.15 0.00 43.67 3.27
272 273 7.488150 TCACACACTTATTACATCGAATGTCTC 59.512 37.037 4.15 0.00 43.67 3.36
273 274 7.320399 TCACACACTTATTACATCGAATGTCT 58.680 34.615 4.15 0.00 43.67 3.41
274 275 7.520119 TCACACACTTATTACATCGAATGTC 57.480 36.000 4.15 0.00 43.67 3.06
275 276 8.390354 CAATCACACACTTATTACATCGAATGT 58.610 33.333 0.00 0.00 46.92 2.71
276 277 7.374228 GCAATCACACACTTATTACATCGAATG 59.626 37.037 0.00 0.00 0.00 2.67
277 278 7.280876 AGCAATCACACACTTATTACATCGAAT 59.719 33.333 0.00 0.00 0.00 3.34
278 279 6.593770 AGCAATCACACACTTATTACATCGAA 59.406 34.615 0.00 0.00 0.00 3.71
279 280 6.106003 AGCAATCACACACTTATTACATCGA 58.894 36.000 0.00 0.00 0.00 3.59
280 281 6.349973 AGCAATCACACACTTATTACATCG 57.650 37.500 0.00 0.00 0.00 3.84
281 282 8.425577 AGTAGCAATCACACACTTATTACATC 57.574 34.615 0.00 0.00 0.00 3.06
282 283 8.260818 AGAGTAGCAATCACACACTTATTACAT 58.739 33.333 0.00 0.00 0.00 2.29
283 284 7.545615 CAGAGTAGCAATCACACACTTATTACA 59.454 37.037 0.00 0.00 0.00 2.41
284 285 7.545965 ACAGAGTAGCAATCACACACTTATTAC 59.454 37.037 0.00 0.00 0.00 1.89
285 286 7.611770 ACAGAGTAGCAATCACACACTTATTA 58.388 34.615 0.00 0.00 0.00 0.98
286 287 6.467677 ACAGAGTAGCAATCACACACTTATT 58.532 36.000 0.00 0.00 0.00 1.40
287 288 6.042638 ACAGAGTAGCAATCACACACTTAT 57.957 37.500 0.00 0.00 0.00 1.73
288 289 5.468540 ACAGAGTAGCAATCACACACTTA 57.531 39.130 0.00 0.00 0.00 2.24
289 290 4.342862 ACAGAGTAGCAATCACACACTT 57.657 40.909 0.00 0.00 0.00 3.16
290 291 4.342862 AACAGAGTAGCAATCACACACT 57.657 40.909 0.00 0.00 0.00 3.55
291 292 4.988540 TGTAACAGAGTAGCAATCACACAC 59.011 41.667 0.00 0.00 0.00 3.82
292 293 5.208463 TGTAACAGAGTAGCAATCACACA 57.792 39.130 0.00 0.00 0.00 3.72
293 294 6.539649 TTTGTAACAGAGTAGCAATCACAC 57.460 37.500 0.00 0.00 0.00 3.82
294 295 6.371548 GGATTTGTAACAGAGTAGCAATCACA 59.628 38.462 0.00 0.00 0.00 3.58
295 296 6.595716 AGGATTTGTAACAGAGTAGCAATCAC 59.404 38.462 0.00 0.00 0.00 3.06
296 297 6.711277 AGGATTTGTAACAGAGTAGCAATCA 58.289 36.000 0.00 0.00 0.00 2.57
297 298 7.464710 CGAAGGATTTGTAACAGAGTAGCAATC 60.465 40.741 0.00 0.00 0.00 2.67
298 299 6.313905 CGAAGGATTTGTAACAGAGTAGCAAT 59.686 38.462 0.00 0.00 0.00 3.56
299 300 5.637810 CGAAGGATTTGTAACAGAGTAGCAA 59.362 40.000 0.00 0.00 0.00 3.91
300 301 5.047590 TCGAAGGATTTGTAACAGAGTAGCA 60.048 40.000 0.00 0.00 0.00 3.49
301 302 5.408356 TCGAAGGATTTGTAACAGAGTAGC 58.592 41.667 0.00 0.00 0.00 3.58
302 303 6.622549 ACTCGAAGGATTTGTAACAGAGTAG 58.377 40.000 0.00 0.00 35.06 2.57
303 304 6.585695 ACTCGAAGGATTTGTAACAGAGTA 57.414 37.500 0.00 0.00 35.06 2.59
304 305 5.470047 ACTCGAAGGATTTGTAACAGAGT 57.530 39.130 0.00 0.00 0.00 3.24
305 306 9.751542 ATAATACTCGAAGGATTTGTAACAGAG 57.248 33.333 0.00 0.00 0.00 3.35
306 307 9.529325 CATAATACTCGAAGGATTTGTAACAGA 57.471 33.333 0.00 0.00 0.00 3.41
307 308 9.314321 ACATAATACTCGAAGGATTTGTAACAG 57.686 33.333 0.00 0.00 0.00 3.16
308 309 9.093970 CACATAATACTCGAAGGATTTGTAACA 57.906 33.333 0.00 0.00 0.00 2.41
309 310 9.095065 ACACATAATACTCGAAGGATTTGTAAC 57.905 33.333 0.00 0.00 0.00 2.50
310 311 9.093970 CACACATAATACTCGAAGGATTTGTAA 57.906 33.333 0.00 0.00 0.00 2.41
311 312 8.255206 ACACACATAATACTCGAAGGATTTGTA 58.745 33.333 0.00 0.00 0.00 2.41
312 313 7.103641 ACACACATAATACTCGAAGGATTTGT 58.896 34.615 0.00 0.00 0.00 2.83
313 314 7.277760 TGACACACATAATACTCGAAGGATTTG 59.722 37.037 0.00 0.00 0.00 2.32
314 315 7.327975 TGACACACATAATACTCGAAGGATTT 58.672 34.615 0.00 0.00 0.00 2.17
315 316 6.873997 TGACACACATAATACTCGAAGGATT 58.126 36.000 0.00 0.00 0.00 3.01
316 317 6.465439 TGACACACATAATACTCGAAGGAT 57.535 37.500 0.00 0.00 0.00 3.24
317 318 5.678871 GCTGACACACATAATACTCGAAGGA 60.679 44.000 0.00 0.00 0.00 3.36
318 319 4.504461 GCTGACACACATAATACTCGAAGG 59.496 45.833 0.00 0.00 0.00 3.46
319 320 5.102313 TGCTGACACACATAATACTCGAAG 58.898 41.667 0.00 0.00 0.00 3.79
320 321 5.066968 TGCTGACACACATAATACTCGAA 57.933 39.130 0.00 0.00 0.00 3.71
321 322 4.712122 TGCTGACACACATAATACTCGA 57.288 40.909 0.00 0.00 0.00 4.04
322 323 5.973651 AATGCTGACACACATAATACTCG 57.026 39.130 0.00 0.00 0.00 4.18
323 324 6.074302 CGGTAATGCTGACACACATAATACTC 60.074 42.308 0.00 0.00 0.00 2.59
324 325 5.753438 CGGTAATGCTGACACACATAATACT 59.247 40.000 0.00 0.00 0.00 2.12
325 326 5.050363 CCGGTAATGCTGACACACATAATAC 60.050 44.000 0.00 0.00 0.00 1.89
326 327 5.053811 CCGGTAATGCTGACACACATAATA 58.946 41.667 0.00 0.00 0.00 0.98
327 328 3.876914 CCGGTAATGCTGACACACATAAT 59.123 43.478 0.00 0.00 0.00 1.28
328 329 3.266636 CCGGTAATGCTGACACACATAA 58.733 45.455 0.00 0.00 0.00 1.90
329 330 2.235155 ACCGGTAATGCTGACACACATA 59.765 45.455 4.49 0.00 0.00 2.29
330 331 1.003118 ACCGGTAATGCTGACACACAT 59.997 47.619 4.49 0.00 0.00 3.21
331 332 0.394938 ACCGGTAATGCTGACACACA 59.605 50.000 4.49 0.00 0.00 3.72
332 333 1.076332 GACCGGTAATGCTGACACAC 58.924 55.000 7.34 0.00 0.00 3.82
333 334 0.036765 GGACCGGTAATGCTGACACA 60.037 55.000 7.34 0.00 0.00 3.72
334 335 0.036765 TGGACCGGTAATGCTGACAC 60.037 55.000 7.34 0.00 0.00 3.67
335 336 0.249120 CTGGACCGGTAATGCTGACA 59.751 55.000 7.34 0.00 0.00 3.58
336 337 0.462047 CCTGGACCGGTAATGCTGAC 60.462 60.000 7.34 0.00 0.00 3.51
337 338 1.622607 CCCTGGACCGGTAATGCTGA 61.623 60.000 7.34 0.00 0.00 4.26
338 339 1.153168 CCCTGGACCGGTAATGCTG 60.153 63.158 7.34 0.00 0.00 4.41
339 340 0.694444 ATCCCTGGACCGGTAATGCT 60.694 55.000 7.34 0.00 0.00 3.79
340 341 0.535102 CATCCCTGGACCGGTAATGC 60.535 60.000 7.34 0.00 0.00 3.56
341 342 1.128200 TCATCCCTGGACCGGTAATG 58.872 55.000 7.34 5.19 0.00 1.90
342 343 1.129058 GTCATCCCTGGACCGGTAAT 58.871 55.000 7.34 0.00 0.00 1.89
343 344 0.252330 TGTCATCCCTGGACCGGTAA 60.252 55.000 7.34 0.00 34.36 2.85
344 345 0.974010 GTGTCATCCCTGGACCGGTA 60.974 60.000 7.34 0.00 34.36 4.02
345 346 2.121832 TGTCATCCCTGGACCGGT 59.878 61.111 6.92 6.92 34.36 5.28
346 347 1.990060 AGTGTCATCCCTGGACCGG 60.990 63.158 0.00 0.00 34.36 5.28
347 348 1.219124 CAGTGTCATCCCTGGACCG 59.781 63.158 0.00 0.00 34.36 4.79
348 349 0.984230 TTCAGTGTCATCCCTGGACC 59.016 55.000 0.00 0.00 34.36 4.46
349 350 1.347707 TGTTCAGTGTCATCCCTGGAC 59.652 52.381 0.00 0.00 37.65 4.02
350 351 1.347707 GTGTTCAGTGTCATCCCTGGA 59.652 52.381 0.00 0.00 0.00 3.86
351 352 1.072173 TGTGTTCAGTGTCATCCCTGG 59.928 52.381 0.00 0.00 0.00 4.45
352 353 2.037641 TCTGTGTTCAGTGTCATCCCTG 59.962 50.000 0.00 0.00 41.91 4.45
353 354 2.301296 CTCTGTGTTCAGTGTCATCCCT 59.699 50.000 0.00 0.00 41.91 4.20
354 355 2.300152 TCTCTGTGTTCAGTGTCATCCC 59.700 50.000 0.00 0.00 41.91 3.85
355 356 3.006323 AGTCTCTGTGTTCAGTGTCATCC 59.994 47.826 0.00 0.00 41.91 3.51
356 357 4.250116 AGTCTCTGTGTTCAGTGTCATC 57.750 45.455 0.00 0.00 41.91 2.92
357 358 4.100035 TCAAGTCTCTGTGTTCAGTGTCAT 59.900 41.667 0.00 0.00 41.91 3.06
358 359 3.447229 TCAAGTCTCTGTGTTCAGTGTCA 59.553 43.478 0.00 0.00 41.91 3.58
359 360 3.799420 GTCAAGTCTCTGTGTTCAGTGTC 59.201 47.826 0.00 0.00 41.91 3.67
360 361 3.430929 GGTCAAGTCTCTGTGTTCAGTGT 60.431 47.826 0.00 0.00 41.91 3.55
361 362 3.126831 GGTCAAGTCTCTGTGTTCAGTG 58.873 50.000 0.00 0.00 41.91 3.66
362 363 2.223829 CGGTCAAGTCTCTGTGTTCAGT 60.224 50.000 0.00 0.00 41.91 3.41
363 364 2.223829 ACGGTCAAGTCTCTGTGTTCAG 60.224 50.000 0.00 0.00 42.54 3.02
364 365 1.754803 ACGGTCAAGTCTCTGTGTTCA 59.245 47.619 0.00 0.00 0.00 3.18
365 366 2.395654 GACGGTCAAGTCTCTGTGTTC 58.604 52.381 2.62 0.00 38.09 3.18
366 367 2.510768 GACGGTCAAGTCTCTGTGTT 57.489 50.000 2.62 0.00 38.09 3.32
374 375 2.611518 CCAATCTCAGACGGTCAAGTC 58.388 52.381 11.27 0.00 41.23 3.01
375 376 1.276421 CCCAATCTCAGACGGTCAAGT 59.724 52.381 11.27 0.00 0.00 3.16
376 377 1.276421 ACCCAATCTCAGACGGTCAAG 59.724 52.381 11.27 7.50 0.00 3.02
377 378 1.275291 GACCCAATCTCAGACGGTCAA 59.725 52.381 11.27 0.00 42.17 3.18
378 379 0.895530 GACCCAATCTCAGACGGTCA 59.104 55.000 11.27 0.00 42.17 4.02
379 380 0.179134 CGACCCAATCTCAGACGGTC 60.179 60.000 0.00 0.00 39.73 4.79
380 381 1.890894 CGACCCAATCTCAGACGGT 59.109 57.895 0.00 0.00 0.00 4.83
381 382 1.519455 GCGACCCAATCTCAGACGG 60.519 63.158 0.00 0.00 0.00 4.79
382 383 0.738975 TAGCGACCCAATCTCAGACG 59.261 55.000 0.00 0.00 0.00 4.18
383 384 1.476891 TGTAGCGACCCAATCTCAGAC 59.523 52.381 0.00 0.00 0.00 3.51
384 385 1.847328 TGTAGCGACCCAATCTCAGA 58.153 50.000 0.00 0.00 0.00 3.27
385 386 2.159043 ACATGTAGCGACCCAATCTCAG 60.159 50.000 0.00 0.00 0.00 3.35
386 387 1.831106 ACATGTAGCGACCCAATCTCA 59.169 47.619 0.00 0.00 0.00 3.27
387 388 2.604046 ACATGTAGCGACCCAATCTC 57.396 50.000 0.00 0.00 0.00 2.75
388 389 2.501723 AGAACATGTAGCGACCCAATCT 59.498 45.455 0.00 0.00 0.00 2.40
389 390 2.906354 AGAACATGTAGCGACCCAATC 58.094 47.619 0.00 0.00 0.00 2.67
390 391 4.100963 TCATAGAACATGTAGCGACCCAAT 59.899 41.667 0.00 0.00 0.00 3.16
391 392 3.449377 TCATAGAACATGTAGCGACCCAA 59.551 43.478 0.00 0.00 0.00 4.12
392 393 3.028130 TCATAGAACATGTAGCGACCCA 58.972 45.455 0.00 0.00 0.00 4.51
393 394 3.181479 TGTCATAGAACATGTAGCGACCC 60.181 47.826 0.00 0.00 0.00 4.46
394 395 4.041740 TGTCATAGAACATGTAGCGACC 57.958 45.455 0.00 0.00 0.00 4.79
395 396 6.255670 TGATTTGTCATAGAACATGTAGCGAC 59.744 38.462 0.00 2.96 0.00 5.19
396 397 6.337356 TGATTTGTCATAGAACATGTAGCGA 58.663 36.000 0.00 0.00 0.00 4.93
397 398 6.588348 TGATTTGTCATAGAACATGTAGCG 57.412 37.500 0.00 0.00 0.00 4.26
398 399 8.066595 GTCATGATTTGTCATAGAACATGTAGC 58.933 37.037 0.00 0.00 36.23 3.58
399 400 9.322773 AGTCATGATTTGTCATAGAACATGTAG 57.677 33.333 0.00 0.00 36.23 2.74
400 401 9.671279 AAGTCATGATTTGTCATAGAACATGTA 57.329 29.630 2.18 0.00 36.23 2.29
401 402 8.456471 CAAGTCATGATTTGTCATAGAACATGT 58.544 33.333 19.77 0.00 36.23 3.21
402 403 8.456471 ACAAGTCATGATTTGTCATAGAACATG 58.544 33.333 25.86 3.91 36.70 3.21
403 404 8.571461 ACAAGTCATGATTTGTCATAGAACAT 57.429 30.769 25.86 4.55 36.70 2.71
404 405 7.984422 ACAAGTCATGATTTGTCATAGAACA 57.016 32.000 25.86 0.00 36.70 3.18
439 441 5.663456 TCGTCTTCAATGATCATGTGATGA 58.337 37.500 9.46 16.93 44.55 2.92
443 445 6.312180 TCTCTTTCGTCTTCAATGATCATGTG 59.688 38.462 9.46 9.84 0.00 3.21
463 465 2.260639 TTCCCAGGCATCTCTCTCTT 57.739 50.000 0.00 0.00 0.00 2.85
464 466 2.493099 ATTCCCAGGCATCTCTCTCT 57.507 50.000 0.00 0.00 0.00 3.10
479 481 6.192360 CGACTCAACCAATATCGAAAATTCC 58.808 40.000 0.00 0.00 34.77 3.01
483 485 4.823157 TCCGACTCAACCAATATCGAAAA 58.177 39.130 0.00 0.00 34.77 2.29
492 494 4.707934 TGTATCATACTCCGACTCAACCAA 59.292 41.667 0.00 0.00 0.00 3.67
503 521 9.722056 GTCAAAATCATGTTTGTATCATACTCC 57.278 33.333 8.23 0.00 39.16 3.85
520 538 8.868522 ATACTCCTCAAAGAATGTCAAAATCA 57.131 30.769 0.00 0.00 0.00 2.57
524 542 5.351465 GCGATACTCCTCAAAGAATGTCAAA 59.649 40.000 0.00 0.00 0.00 2.69
534 552 3.380320 TCGATCTTGCGATACTCCTCAAA 59.620 43.478 0.00 0.00 35.01 2.69
543 561 3.317993 TGATGGTTCTCGATCTTGCGATA 59.682 43.478 0.00 0.00 39.85 2.92
562 580 4.927267 TGGAGTTGGGTATGAACTTGAT 57.073 40.909 0.00 0.00 33.71 2.57
812 881 6.622427 AGTGGAGTATACTAAGTTTTGGCT 57.378 37.500 5.09 0.00 0.00 4.75
882 961 2.284190 GAGCATCAACCAGACCTTAGC 58.716 52.381 0.00 0.00 33.17 3.09
895 974 4.758251 CCGTGCCGGTGAGCATCA 62.758 66.667 1.90 0.00 46.24 3.07
917 997 2.418083 GGCAGCATGGTTGGTAGGC 61.418 63.158 0.00 0.00 35.86 3.93
988 1069 2.819595 CGGCATCGGAAGTGTGGG 60.820 66.667 0.00 0.00 0.00 4.61
1244 1325 0.398098 GTACGAGAGGGATTGGGGGA 60.398 60.000 0.00 0.00 0.00 4.81
1347 1428 1.136984 GTCGACGAGGTGTAGGCTG 59.863 63.158 0.00 0.00 0.00 4.85
1573 1654 2.460918 GAATTCGATGACGGTCGTGAT 58.539 47.619 7.75 0.00 42.07 3.06
1673 1754 4.641645 TGGTTGGCAGCAGTCGGG 62.642 66.667 3.14 0.00 0.00 5.14
1698 1779 3.000819 AATCTGGTGGCGTCCGGA 61.001 61.111 0.00 0.00 45.47 5.14
1728 1809 1.981853 AACCAAATGCGGCCCGAAT 60.982 52.632 7.68 0.00 0.00 3.34
1932 2013 2.203153 ACGTCCACACAAGCCACC 60.203 61.111 0.00 0.00 0.00 4.61
2065 2146 1.064803 CATCGTCTCCCTCGAGTTCAG 59.935 57.143 12.31 3.98 40.57 3.02
2126 2207 6.831769 TGCTACGATCATCAAAAGAAAAGAC 58.168 36.000 0.00 0.00 0.00 3.01
2144 2225 6.888430 AGAAACAGTGACTTATTTTGCTACG 58.112 36.000 0.00 0.00 0.00 3.51
2150 2231 7.514721 TCCAGGTAGAAACAGTGACTTATTTT 58.485 34.615 0.00 0.00 0.00 1.82
2180 2261 7.928307 ACAATAAGCAACTGAATGTAGACAT 57.072 32.000 0.00 0.00 38.41 3.06
2282 2363 6.145858 GCACAAGCACAAATATTCACATCAAA 59.854 34.615 0.00 0.00 41.58 2.69
2311 2392 6.017605 GCACATAGATATCTCCAAACAACAGG 60.018 42.308 8.95 0.00 0.00 4.00
2350 2431 2.417719 GAGAAGTTACAGGCCACACAG 58.582 52.381 5.01 0.00 0.00 3.66
2353 2434 0.320421 GCGAGAAGTTACAGGCCACA 60.320 55.000 5.01 0.00 0.00 4.17
2362 2443 4.037089 TCAGTGTGTAAGTGCGAGAAGTTA 59.963 41.667 0.00 0.00 0.00 2.24
2427 2508 9.835389 AACCATATAAATTTTAGCGGTACAGTA 57.165 29.630 0.00 0.00 0.00 2.74
2435 2516 7.589587 TCGATGCAAACCATATAAATTTTAGCG 59.410 33.333 0.00 0.00 33.29 4.26
2573 2657 5.537674 ACTCACTTTCTCAGCCAAAATTCAT 59.462 36.000 0.00 0.00 0.00 2.57
2774 2861 9.199982 CAATCATGTCATTATTATGGAAAAGGC 57.800 33.333 0.00 0.00 32.40 4.35
2812 2899 9.473007 TCCATGATAACAGAAATGGTTATGAAA 57.527 29.630 0.00 0.00 40.51 2.69
2816 2903 9.818270 ATCATCCATGATAACAGAAATGGTTAT 57.182 29.630 0.00 0.00 45.17 1.89
2835 2922 5.408880 TCCACTAACAAACGTATCATCCA 57.591 39.130 0.00 0.00 0.00 3.41
2837 2924 7.715265 ATCATCCACTAACAAACGTATCATC 57.285 36.000 0.00 0.00 0.00 2.92
2925 3012 4.945246 ACATGTGGACTATTCGGTACATC 58.055 43.478 0.00 0.00 32.21 3.06
2926 3013 5.128827 AGAACATGTGGACTATTCGGTACAT 59.871 40.000 0.00 0.00 32.21 2.29
3083 3171 7.395190 AAATACATGTGCTTGCTAGAATCAA 57.605 32.000 9.11 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.