Multiple sequence alignment - TraesCS6A01G266100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G266100 chr6A 100.000 3939 0 0 1 3939 491025772 491029710 0.000000e+00 7275.0
1 TraesCS6A01G266100 chr6A 86.458 192 26 0 2077 2268 56134606 56134797 1.110000e-50 211.0
2 TraesCS6A01G266100 chr6A 91.304 69 6 0 3871 3939 546707197 546707265 1.170000e-15 95.3
3 TraesCS6A01G266100 chr6A 80.952 105 20 0 1282 1386 56134499 56134603 2.520000e-12 84.2
4 TraesCS6A01G266100 chr6D 89.899 2772 147 73 855 3582 351971754 351969072 0.000000e+00 3445.0
5 TraesCS6A01G266100 chr6D 88.876 836 44 27 1 813 351972552 351971743 0.000000e+00 983.0
6 TraesCS6A01G266100 chr6B 87.940 2015 104 66 1473 3443 527042992 527044911 0.000000e+00 2246.0
7 TraesCS6A01G266100 chr6B 85.000 900 63 46 623 1482 527041915 527042782 0.000000e+00 848.0
8 TraesCS6A01G266100 chr6B 88.517 627 35 13 1 625 527039499 527040090 0.000000e+00 725.0
9 TraesCS6A01G266100 chr6B 86.458 192 26 0 2077 2268 92697751 92697942 1.110000e-50 211.0
10 TraesCS6A01G266100 chr5B 87.156 218 24 4 2070 2285 367212636 367212421 1.090000e-60 244.0
11 TraesCS6A01G266100 chr5B 79.904 209 40 2 2373 2580 367212000 367211793 6.820000e-33 152.0
12 TraesCS6A01G266100 chr5D 86.697 218 25 4 2070 2285 317453037 317452822 5.090000e-59 239.0
13 TraesCS6A01G266100 chr5D 77.143 315 58 10 3502 3807 319510714 319511023 1.880000e-38 171.0
14 TraesCS6A01G266100 chr5A 86.697 218 25 4 2070 2285 412104200 412103985 5.090000e-59 239.0
15 TraesCS6A01G266100 chr5A 76.721 305 61 7 3504 3801 612159202 612159503 1.130000e-35 161.0
16 TraesCS6A01G266100 chr5A 79.426 209 41 2 2373 2580 412103614 412103407 3.170000e-31 147.0
17 TraesCS6A01G266100 chr5A 91.304 69 6 0 3871 3939 121639770 121639702 1.170000e-15 95.3
18 TraesCS6A01G266100 chrUn 86.458 192 26 0 2077 2268 20367270 20367461 1.110000e-50 211.0
19 TraesCS6A01G266100 chrUn 80.952 105 20 0 1282 1386 20367163 20367267 2.520000e-12 84.2
20 TraesCS6A01G266100 chr3B 78.723 329 51 17 3501 3818 560875696 560875376 6.670000e-48 202.0
21 TraesCS6A01G266100 chr3B 77.673 318 58 11 3499 3809 36468739 36469050 8.690000e-42 182.0
22 TraesCS6A01G266100 chr3B 91.304 69 6 0 3871 3939 92929543 92929611 1.170000e-15 95.3
23 TraesCS6A01G266100 chr2A 78.797 316 51 15 3502 3807 72933543 72933234 8.630000e-47 198.0
24 TraesCS6A01G266100 chr2A 93.056 72 3 2 3869 3939 143274629 143274699 1.940000e-18 104.0
25 TraesCS6A01G266100 chr4D 83.838 198 28 4 2071 2266 390598131 390598326 6.720000e-43 185.0
26 TraesCS6A01G266100 chr4D 87.654 81 10 0 1312 1392 390597931 390598011 1.170000e-15 95.3
27 TraesCS6A01G266100 chr1D 81.614 223 37 4 2379 2599 282137488 282137708 8.690000e-42 182.0
28 TraesCS6A01G266100 chr7B 78.967 271 45 9 3542 3805 710460068 710460333 1.450000e-39 174.0
29 TraesCS6A01G266100 chr3D 77.070 314 60 9 3503 3808 123313298 123312989 1.880000e-38 171.0
30 TraesCS6A01G266100 chr2D 77.152 302 56 8 3512 3804 649822240 649821943 3.150000e-36 163.0
31 TraesCS6A01G266100 chr1B 76.489 319 61 12 3500 3809 17804329 17804642 1.130000e-35 161.0
32 TraesCS6A01G266100 chr1B 91.549 71 6 0 3869 3939 622367465 622367395 9.010000e-17 99.0
33 TraesCS6A01G266100 chr1B 90.278 72 7 0 3868 3939 41839785 41839856 1.170000e-15 95.3
34 TraesCS6A01G266100 chr1A 90.909 77 5 2 3864 3939 369512474 369512549 6.960000e-18 102.0
35 TraesCS6A01G266100 chr3A 91.304 69 6 0 3871 3939 22781803 22781735 1.170000e-15 95.3
36 TraesCS6A01G266100 chr3A 91.304 69 6 0 3869 3937 443099175 443099243 1.170000e-15 95.3
37 TraesCS6A01G266100 chr4A 86.420 81 11 0 1312 1392 72294213 72294293 5.420000e-14 89.8
38 TraesCS6A01G266100 chr4B 85.185 81 12 0 1312 1392 480590717 480590797 2.520000e-12 84.2
39 TraesCS6A01G266100 chr2B 86.486 74 8 1 1321 1392 374241015 374240942 3.260000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G266100 chr6A 491025772 491029710 3938 False 7275 7275 100.000000 1 3939 1 chr6A.!!$F1 3938
1 TraesCS6A01G266100 chr6D 351969072 351972552 3480 True 2214 3445 89.387500 1 3582 2 chr6D.!!$R1 3581
2 TraesCS6A01G266100 chr6B 527039499 527044911 5412 False 1273 2246 87.152333 1 3443 3 chr6B.!!$F2 3442

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 360 0.237761 CGACCCGAGCTAATCTACGG 59.762 60.0 2.41 2.41 44.16 4.02 F
1440 3339 0.041576 GCGAACGTTTCCTGTCCAAC 60.042 55.0 0.46 0.00 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 4451 0.099968 TATACGTGCGGTGAGAGTGC 59.900 55.0 0.0 0.0 0.00 4.40 R
3143 5297 0.555769 TGGTGCCTTTGGAGGAAACT 59.444 50.0 0.0 0.0 46.74 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.075698 ACCGGTCAGAAAGGAGAGAGA 59.924 52.381 0.00 0.00 0.00 3.10
52 53 2.171840 CCGGTCAGAAAGGAGAGAGAA 58.828 52.381 0.00 0.00 0.00 2.87
53 54 2.094442 CCGGTCAGAAAGGAGAGAGAAC 60.094 54.545 0.00 0.00 0.00 3.01
54 55 2.414824 CGGTCAGAAAGGAGAGAGAACG 60.415 54.545 0.00 0.00 0.00 3.95
55 56 2.559231 GGTCAGAAAGGAGAGAGAACGT 59.441 50.000 0.00 0.00 0.00 3.99
56 57 3.757493 GGTCAGAAAGGAGAGAGAACGTA 59.243 47.826 0.00 0.00 0.00 3.57
57 58 4.217983 GGTCAGAAAGGAGAGAGAACGTAA 59.782 45.833 0.00 0.00 0.00 3.18
70 71 1.856802 AACGTAAGGTCGTGGTTGTC 58.143 50.000 0.00 0.00 43.38 3.18
147 148 1.380112 ACCAGTCCTACTCGGAGGC 60.380 63.158 10.23 0.00 44.20 4.70
164 165 3.220222 CCGGAGCAGAGGCATACA 58.780 61.111 0.00 0.00 44.61 2.29
165 166 1.750930 CCGGAGCAGAGGCATACAT 59.249 57.895 0.00 0.00 44.61 2.29
291 292 1.511850 CGATCCGCCATTAATCTGCA 58.488 50.000 7.15 0.00 0.00 4.41
313 314 5.619086 GCAAACAGTAACACGCCATATTCTT 60.619 40.000 0.00 0.00 0.00 2.52
339 340 1.298713 CGAGCACCGATCTCTTCCG 60.299 63.158 0.00 0.00 41.76 4.30
340 341 1.715862 CGAGCACCGATCTCTTCCGA 61.716 60.000 0.00 0.00 41.76 4.55
357 360 0.237761 CGACCCGAGCTAATCTACGG 59.762 60.000 2.41 2.41 44.16 4.02
367 370 2.373269 CTAATCTACGGAAGCACGTCG 58.627 52.381 4.40 0.00 45.08 5.12
375 378 2.027073 GAAGCACGTCGCATGACCA 61.027 57.895 11.58 0.00 46.13 4.02
383 386 2.209273 CGTCGCATGACCATCCATAAA 58.791 47.619 0.00 0.00 42.37 1.40
393 396 4.165180 TGACCATCCATAAAAATCTCCCGA 59.835 41.667 0.00 0.00 0.00 5.14
400 403 4.576463 CCATAAAAATCTCCCGACTCCAAG 59.424 45.833 0.00 0.00 0.00 3.61
419 422 1.429423 CGTTCGTCCTACGTACCCC 59.571 63.158 0.00 0.00 43.14 4.95
420 423 1.026718 CGTTCGTCCTACGTACCCCT 61.027 60.000 0.00 0.00 43.14 4.79
444 447 7.752239 CCTGCGAATAATCATCATATTTCAACC 59.248 37.037 0.00 0.00 0.00 3.77
445 448 8.164058 TGCGAATAATCATCATATTTCAACCA 57.836 30.769 0.00 0.00 0.00 3.67
587 603 4.319949 ATGCCAAGCCAAGCCCCA 62.320 61.111 0.00 0.00 0.00 4.96
588 604 3.629035 ATGCCAAGCCAAGCCCCAT 62.629 57.895 0.00 0.00 0.00 4.00
589 605 3.464494 GCCAAGCCAAGCCCCATC 61.464 66.667 0.00 0.00 0.00 3.51
591 607 2.037687 CAAGCCAAGCCCCATCCA 59.962 61.111 0.00 0.00 0.00 3.41
592 608 1.382146 CAAGCCAAGCCCCATCCAT 60.382 57.895 0.00 0.00 0.00 3.41
593 609 1.075748 AAGCCAAGCCCCATCCATC 60.076 57.895 0.00 0.00 0.00 3.51
594 610 1.877672 AAGCCAAGCCCCATCCATCA 61.878 55.000 0.00 0.00 0.00 3.07
595 611 2.129785 GCCAAGCCCCATCCATCAC 61.130 63.158 0.00 0.00 0.00 3.06
597 613 1.307309 CAAGCCCCATCCATCACCA 59.693 57.895 0.00 0.00 0.00 4.17
598 614 1.039233 CAAGCCCCATCCATCACCAC 61.039 60.000 0.00 0.00 0.00 4.16
599 615 1.217057 AAGCCCCATCCATCACCACT 61.217 55.000 0.00 0.00 0.00 4.00
642 2485 1.462426 TACCCACCACCATCCCTTTT 58.538 50.000 0.00 0.00 0.00 2.27
650 2493 2.299867 CCACCATCCCTTTTTCCTGTTG 59.700 50.000 0.00 0.00 0.00 3.33
675 2518 3.556999 TCATAAACTCCTCCTCTCTCGG 58.443 50.000 0.00 0.00 0.00 4.63
781 2630 4.704833 GAACGGGCCAGCTCAGCA 62.705 66.667 4.39 0.00 0.00 4.41
828 2702 3.120086 GCGGCATAGGATGGGTGGT 62.120 63.158 0.00 0.00 0.00 4.16
851 2725 4.468689 CCCGCCCGGTTCCTTCTC 62.469 72.222 0.00 0.00 0.00 2.87
944 2818 4.292186 TGGTTCTTGAATCTTGAGAGGG 57.708 45.455 0.00 0.00 0.00 4.30
968 2842 5.937540 GGAAAGAGAAAGAAAGGAAGAGAGG 59.062 44.000 0.00 0.00 0.00 3.69
976 2851 3.839432 GGAAGAGAGGGGACGCCG 61.839 72.222 2.39 0.00 0.00 6.46
991 2866 4.007644 CCGTGAGAGCACCAGCCA 62.008 66.667 0.00 0.00 42.09 4.75
993 2868 2.046507 GTGAGAGCACCAGCCAGG 60.047 66.667 0.00 0.00 43.56 4.45
1014 2889 3.518003 GCAATGGCGATGAAGGCT 58.482 55.556 0.00 0.00 37.59 4.58
1015 2890 1.065273 GCAATGGCGATGAAGGCTG 59.935 57.895 0.00 0.00 37.59 4.85
1195 3085 2.777972 CGCTCCGGTAACCCATCGA 61.778 63.158 0.00 0.00 0.00 3.59
1197 3087 0.106149 GCTCCGGTAACCCATCGATT 59.894 55.000 0.00 0.00 0.00 3.34
1198 3088 1.872653 GCTCCGGTAACCCATCGATTC 60.873 57.143 0.00 0.00 0.00 2.52
1202 3092 2.366266 CCGGTAACCCATCGATTCCTTA 59.634 50.000 0.00 0.00 0.00 2.69
1209 3106 7.553760 GGTAACCCATCGATTCCTTACTTTTTA 59.446 37.037 0.00 0.00 0.00 1.52
1211 3108 5.884232 ACCCATCGATTCCTTACTTTTTACC 59.116 40.000 0.00 0.00 0.00 2.85
1225 3122 5.628130 ACTTTTTACCTACCTGAAACCCTC 58.372 41.667 0.00 0.00 0.00 4.30
1235 3134 2.239400 CTGAAACCCTCCCTTGTTTCC 58.761 52.381 11.33 0.00 46.13 3.13
1238 3137 2.143231 AACCCTCCCTTGTTTCCCTA 57.857 50.000 0.00 0.00 0.00 3.53
1280 3179 1.796796 GGCGCTCTTTGGATCACAC 59.203 57.895 7.64 0.00 0.00 3.82
1319 3218 2.894126 CTCCTCGGATTACTACCTGCAT 59.106 50.000 0.00 0.00 0.00 3.96
1440 3339 0.041576 GCGAACGTTTCCTGTCCAAC 60.042 55.000 0.46 0.00 0.00 3.77
1446 3345 5.614013 CGAACGTTTCCTGTCCAACTTAATC 60.614 44.000 0.46 0.00 0.00 1.75
1471 3585 3.667166 GCAACGGTTTCAGCTTAGCTTAC 60.667 47.826 3.00 3.15 36.40 2.34
1505 3620 3.840890 TGTTAATCCATGGCGTTGTTC 57.159 42.857 6.96 1.30 0.00 3.18
1555 3670 0.389817 TCACATGGCGTGTCAGCTAC 60.390 55.000 9.92 0.00 46.44 3.58
1590 3705 2.472695 TTTACTACCTGCCACTGCTG 57.527 50.000 0.00 0.00 38.71 4.41
1638 3755 1.748122 CACACCATGCTCTCTGGCC 60.748 63.158 0.00 0.00 37.27 5.36
1645 3762 3.695606 GCTCTCTGGCCGTGGTGA 61.696 66.667 0.00 0.00 0.00 4.02
1646 3763 2.575993 CTCTCTGGCCGTGGTGAG 59.424 66.667 0.00 3.17 0.00 3.51
1647 3764 2.203640 TCTCTGGCCGTGGTGAGT 60.204 61.111 0.00 0.00 0.00 3.41
1648 3765 2.047844 CTCTGGCCGTGGTGAGTG 60.048 66.667 0.00 0.00 0.00 3.51
1649 3766 2.842462 TCTGGCCGTGGTGAGTGT 60.842 61.111 0.00 0.00 0.00 3.55
1651 3768 4.248842 TGGCCGTGGTGAGTGTGG 62.249 66.667 0.00 0.00 0.00 4.17
1652 3769 4.250305 GGCCGTGGTGAGTGTGGT 62.250 66.667 0.00 0.00 0.00 4.16
1653 3770 2.972505 GCCGTGGTGAGTGTGGTG 60.973 66.667 0.00 0.00 0.00 4.17
1655 3772 1.594293 CCGTGGTGAGTGTGGTGAC 60.594 63.158 0.00 0.00 0.00 3.67
1656 3773 1.142965 CGTGGTGAGTGTGGTGACA 59.857 57.895 0.00 0.00 38.70 3.58
1668 3785 2.364972 TGGTGACACACAGAGAGAGA 57.635 50.000 8.08 0.00 35.86 3.10
1669 3786 2.234143 TGGTGACACACAGAGAGAGAG 58.766 52.381 8.08 0.00 35.86 3.20
1670 3787 2.158608 TGGTGACACACAGAGAGAGAGA 60.159 50.000 8.08 0.00 35.86 3.10
1671 3788 2.487762 GGTGACACACAGAGAGAGAGAG 59.512 54.545 8.08 0.00 35.86 3.20
1672 3789 3.407698 GTGACACACAGAGAGAGAGAGA 58.592 50.000 0.00 0.00 34.08 3.10
1673 3790 3.436704 GTGACACACAGAGAGAGAGAGAG 59.563 52.174 0.00 0.00 34.08 3.20
1674 3791 3.326297 TGACACACAGAGAGAGAGAGAGA 59.674 47.826 0.00 0.00 0.00 3.10
1675 3792 3.935203 GACACACAGAGAGAGAGAGAGAG 59.065 52.174 0.00 0.00 0.00 3.20
1676 3793 3.582647 ACACACAGAGAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
1677 3794 4.186926 CACACAGAGAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
1678 3795 3.840666 ACACAGAGAGAGAGAGAGAGAGT 59.159 47.826 0.00 0.00 0.00 3.24
1742 3860 2.414750 CCTTCACGGCCACAAAAGT 58.585 52.632 2.24 0.00 0.00 2.66
1783 3901 4.202243 CCGGAATAAATGTTGCCATCCATT 60.202 41.667 0.00 0.00 32.83 3.16
1784 3902 4.984161 CGGAATAAATGTTGCCATCCATTC 59.016 41.667 0.00 0.00 34.02 2.67
1785 3903 5.299949 GGAATAAATGTTGCCATCCATTCC 58.700 41.667 10.23 10.23 40.47 3.01
1786 3904 5.163322 GGAATAAATGTTGCCATCCATTCCA 60.163 40.000 15.87 0.00 43.15 3.53
1787 3905 6.464749 GGAATAAATGTTGCCATCCATTCCAT 60.465 38.462 15.87 0.00 43.15 3.41
1806 3924 2.807045 CCTGTCACGCGCTCTCAC 60.807 66.667 5.73 0.00 0.00 3.51
1836 3954 4.798924 GCATTCATCAGCCTCACCTACTAG 60.799 50.000 0.00 0.00 0.00 2.57
1936 4063 0.107263 TGTGCACAAGAAGCCAGTGA 60.107 50.000 19.28 0.00 35.33 3.41
1937 4064 1.024271 GTGCACAAGAAGCCAGTGAA 58.976 50.000 13.17 0.00 35.33 3.18
1950 4077 2.038295 GCCAGTGAATAGATGGAGGGAG 59.962 54.545 0.00 0.00 36.09 4.30
1979 4112 9.081204 ACGTACAGTACATATTTGGTATGGATA 57.919 33.333 11.37 0.00 43.70 2.59
1985 4118 9.672673 AGTACATATTTGGTATGGATAGATTGC 57.327 33.333 0.00 0.00 43.70 3.56
1996 4129 3.818210 TGGATAGATTGCACAAACACGTT 59.182 39.130 0.00 0.00 0.00 3.99
2059 4209 8.655651 AACTTAACAATGGTGGTATTTTGTTG 57.344 30.769 9.46 0.00 41.13 3.33
2172 4322 3.345808 CGGGTGCAGACCAACGTG 61.346 66.667 8.02 0.00 45.25 4.49
2288 4438 0.251916 CCCACCCACATCATGTACGT 59.748 55.000 0.00 0.00 0.00 3.57
2290 4440 2.546778 CCACCCACATCATGTACGTAC 58.453 52.381 18.90 18.90 0.00 3.67
2291 4441 2.190161 CACCCACATCATGTACGTACG 58.810 52.381 20.18 15.01 0.00 3.67
2292 4442 1.205657 CCCACATCATGTACGTACGC 58.794 55.000 20.18 0.00 0.00 4.42
2293 4443 1.470112 CCCACATCATGTACGTACGCA 60.470 52.381 20.18 6.61 0.00 5.24
2294 4444 2.469826 CCACATCATGTACGTACGCAT 58.530 47.619 20.18 8.92 0.00 4.73
2297 4451 3.180387 CACATCATGTACGTACGCATCAG 59.820 47.826 20.18 10.89 0.00 2.90
2302 4456 1.189403 GTACGTACGCATCAGCACTC 58.811 55.000 16.72 0.00 42.27 3.51
2303 4457 1.092348 TACGTACGCATCAGCACTCT 58.908 50.000 16.72 0.00 42.27 3.24
2307 4461 0.173481 TACGCATCAGCACTCTCACC 59.827 55.000 0.00 0.00 42.27 4.02
2310 4464 1.079612 CATCAGCACTCTCACCGCA 60.080 57.895 0.00 0.00 0.00 5.69
2311 4465 1.079543 ATCAGCACTCTCACCGCAC 60.080 57.895 0.00 0.00 0.00 5.34
2312 4466 2.825726 ATCAGCACTCTCACCGCACG 62.826 60.000 0.00 0.00 0.00 5.34
2314 4468 2.257371 GCACTCTCACCGCACGTA 59.743 61.111 0.00 0.00 0.00 3.57
2315 4469 1.153823 GCACTCTCACCGCACGTAT 60.154 57.895 0.00 0.00 0.00 3.06
2317 4471 1.860399 GCACTCTCACCGCACGTATAG 60.860 57.143 0.00 0.00 0.00 1.31
2318 4472 1.669265 CACTCTCACCGCACGTATAGA 59.331 52.381 0.00 0.00 0.00 1.98
2319 4473 1.669779 ACTCTCACCGCACGTATAGAC 59.330 52.381 0.00 0.00 0.00 2.59
2320 4474 1.941294 CTCTCACCGCACGTATAGACT 59.059 52.381 0.00 0.00 0.00 3.24
2324 4478 2.352651 TCACCGCACGTATAGACTGTAC 59.647 50.000 0.00 0.00 0.00 2.90
2336 4490 7.487189 ACGTATAGACTGTACAATACAAAGTGC 59.513 37.037 13.29 0.00 38.38 4.40
2337 4491 7.486870 CGTATAGACTGTACAATACAAAGTGCA 59.513 37.037 13.29 0.00 38.38 4.57
2338 4492 9.314321 GTATAGACTGTACAATACAAAGTGCAT 57.686 33.333 9.55 0.00 38.38 3.96
2339 4493 6.486253 AGACTGTACAATACAAAGTGCATG 57.514 37.500 0.00 0.00 38.38 4.06
2340 4494 5.412594 AGACTGTACAATACAAAGTGCATGG 59.587 40.000 0.00 0.00 38.38 3.66
2341 4495 4.082787 ACTGTACAATACAAAGTGCATGGC 60.083 41.667 0.00 0.00 38.38 4.40
2342 4496 3.823304 TGTACAATACAAAGTGCATGGCA 59.177 39.130 0.00 0.00 35.38 4.92
2343 4497 4.462132 TGTACAATACAAAGTGCATGGCAT 59.538 37.500 0.00 0.00 36.94 4.40
2344 4498 3.852286 ACAATACAAAGTGCATGGCATG 58.148 40.909 22.99 22.99 41.91 4.06
2345 4499 3.191669 CAATACAAAGTGCATGGCATGG 58.808 45.455 27.48 12.87 41.91 3.66
2346 4500 0.531657 TACAAAGTGCATGGCATGGC 59.468 50.000 27.48 19.51 41.91 4.40
2358 4512 3.104766 CATGGCCACTGACGATGC 58.895 61.111 8.16 0.00 0.00 3.91
2568 4722 1.215679 TTCTCCGACCTCTCCCTCCT 61.216 60.000 0.00 0.00 0.00 3.69
2569 4723 1.152839 CTCCGACCTCTCCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
2572 4726 2.835895 GACCTCTCCCTCCTCGGC 60.836 72.222 0.00 0.00 0.00 5.54
2803 4957 1.444553 GGAGTGCGACAACTCGGAG 60.445 63.158 2.83 2.83 46.31 4.63
2858 5012 1.442769 CAAGACCGTGGTCATGAAGG 58.557 55.000 20.51 1.40 43.84 3.46
2956 5110 3.030291 CTGAGCTCTTACCTGACAGGAT 58.970 50.000 28.56 14.27 37.67 3.24
3010 5164 2.411031 CGGCGTTATATGATTTCGGTGC 60.411 50.000 0.00 0.00 0.00 5.01
3090 5244 9.326413 AGTATTACTATTCTTTGATTCGTTGGG 57.674 33.333 0.00 0.00 0.00 4.12
3113 5267 5.587844 GGTGGCAGCTAATAATATGATCAGG 59.412 44.000 9.90 0.00 0.00 3.86
3143 5297 4.826274 ACTATGGCTACTTTCAGCTTCA 57.174 40.909 0.00 0.00 41.50 3.02
3144 5298 4.764172 ACTATGGCTACTTTCAGCTTCAG 58.236 43.478 0.00 0.00 41.50 3.02
3156 5310 3.480470 TCAGCTTCAGTTTCCTCCAAAG 58.520 45.455 0.00 0.00 0.00 2.77
3170 5324 2.892852 CTCCAAAGGCACCATTTTCAGA 59.107 45.455 0.00 0.00 0.00 3.27
3196 5350 1.581934 TTGTTCCAGTGCTCGACAAG 58.418 50.000 0.00 0.00 0.00 3.16
3199 5353 1.996191 GTTCCAGTGCTCGACAAGATC 59.004 52.381 0.00 0.00 0.00 2.75
3226 5380 6.667558 ACTTCACAATACCCTATAGCCTAC 57.332 41.667 0.00 0.00 0.00 3.18
3229 5383 5.460416 TCACAATACCCTATAGCCTACACA 58.540 41.667 0.00 0.00 0.00 3.72
3230 5384 5.538813 TCACAATACCCTATAGCCTACACAG 59.461 44.000 0.00 0.00 0.00 3.66
3231 5385 5.538813 CACAATACCCTATAGCCTACACAGA 59.461 44.000 0.00 0.00 0.00 3.41
3246 5402 7.281774 AGCCTACACAGAAGTAATCAAATCATG 59.718 37.037 0.00 0.00 0.00 3.07
3283 5448 3.417101 ACCCGACATTTCAAAGCATGTA 58.583 40.909 0.00 0.00 33.62 2.29
3312 5477 3.899052 TTAATCACGGGATTTCGAGGT 57.101 42.857 19.76 0.00 40.87 3.85
3366 5531 1.295423 CGGTGACAACCCGGAGATT 59.705 57.895 0.73 0.00 44.42 2.40
3382 5547 3.123050 GAGATTTTTGGTGTTTTGCGCT 58.877 40.909 9.73 0.00 0.00 5.92
3383 5548 4.295051 GAGATTTTTGGTGTTTTGCGCTA 58.705 39.130 9.73 0.00 0.00 4.26
3384 5549 4.298332 AGATTTTTGGTGTTTTGCGCTAG 58.702 39.130 9.73 0.00 0.00 3.42
3385 5550 2.500509 TTTTGGTGTTTTGCGCTAGG 57.499 45.000 9.73 0.00 0.00 3.02
3386 5551 1.394618 TTTGGTGTTTTGCGCTAGGT 58.605 45.000 9.73 0.00 0.00 3.08
3387 5552 2.257691 TTGGTGTTTTGCGCTAGGTA 57.742 45.000 9.73 0.00 0.00 3.08
3408 5573 1.369625 AGCTTTATTCGCCCGTTCAG 58.630 50.000 0.00 0.00 0.00 3.02
3461 5626 6.827762 CCTACTGTTACTACTAGCAACTAGGT 59.172 42.308 6.58 0.00 38.30 3.08
3463 5628 5.105837 ACTGTTACTACTAGCAACTAGGTGC 60.106 44.000 25.66 25.66 45.28 5.01
3474 5639 1.656587 ACTAGGTGCTGGATTGTCCA 58.343 50.000 0.00 0.00 45.98 4.02
3527 5697 2.162408 CCTCCTTTGAATCAAACGAGCC 59.838 50.000 21.34 0.00 36.17 4.70
3536 5706 0.606604 TCAAACGAGCCCTGTAGGAC 59.393 55.000 0.00 0.00 38.24 3.85
3554 5724 9.401058 CTGTAGGACTTTTGAGGATTGAAATAT 57.599 33.333 0.00 0.00 0.00 1.28
3593 5763 8.900781 ACATTGATTCTTTGATTCATAGGACTG 58.099 33.333 4.57 0.00 0.00 3.51
3594 5764 7.870509 TTGATTCTTTGATTCATAGGACTGG 57.129 36.000 4.57 0.00 0.00 4.00
3595 5765 7.199167 TGATTCTTTGATTCATAGGACTGGA 57.801 36.000 4.57 0.00 0.00 3.86
3596 5766 7.809238 TGATTCTTTGATTCATAGGACTGGAT 58.191 34.615 4.57 0.00 0.00 3.41
3597 5767 7.935755 TGATTCTTTGATTCATAGGACTGGATC 59.064 37.037 4.57 0.00 32.56 3.36
3613 5783 8.341892 GGACTGGATCCCATAGAAATATTTTC 57.658 38.462 9.90 0.00 42.46 2.29
3614 5784 8.166726 GGACTGGATCCCATAGAAATATTTTCT 58.833 37.037 9.90 7.57 42.46 2.52
3665 5835 9.958180 TTCATAGAAAATCTAACATCCACTTCA 57.042 29.630 0.00 0.00 31.96 3.02
3666 5836 9.958180 TCATAGAAAATCTAACATCCACTTCAA 57.042 29.630 0.00 0.00 31.96 2.69
3669 5839 8.868522 AGAAAATCTAACATCCACTTCAATCA 57.131 30.769 0.00 0.00 0.00 2.57
3670 5840 8.734386 AGAAAATCTAACATCCACTTCAATCAC 58.266 33.333 0.00 0.00 0.00 3.06
3671 5841 7.396540 AAATCTAACATCCACTTCAATCACC 57.603 36.000 0.00 0.00 0.00 4.02
3672 5842 5.762179 TCTAACATCCACTTCAATCACCT 57.238 39.130 0.00 0.00 0.00 4.00
3673 5843 6.126863 TCTAACATCCACTTCAATCACCTT 57.873 37.500 0.00 0.00 0.00 3.50
3674 5844 6.173339 TCTAACATCCACTTCAATCACCTTC 58.827 40.000 0.00 0.00 0.00 3.46
3675 5845 4.647564 ACATCCACTTCAATCACCTTCT 57.352 40.909 0.00 0.00 0.00 2.85
3676 5846 5.762179 ACATCCACTTCAATCACCTTCTA 57.238 39.130 0.00 0.00 0.00 2.10
3677 5847 6.319048 ACATCCACTTCAATCACCTTCTAT 57.681 37.500 0.00 0.00 0.00 1.98
3678 5848 7.437713 ACATCCACTTCAATCACCTTCTATA 57.562 36.000 0.00 0.00 0.00 1.31
3679 5849 8.038862 ACATCCACTTCAATCACCTTCTATAT 57.961 34.615 0.00 0.00 0.00 0.86
3680 5850 8.497745 ACATCCACTTCAATCACCTTCTATATT 58.502 33.333 0.00 0.00 0.00 1.28
3681 5851 9.347240 CATCCACTTCAATCACCTTCTATATTT 57.653 33.333 0.00 0.00 0.00 1.40
3682 5852 9.927081 ATCCACTTCAATCACCTTCTATATTTT 57.073 29.630 0.00 0.00 0.00 1.82
3683 5853 9.396022 TCCACTTCAATCACCTTCTATATTTTC 57.604 33.333 0.00 0.00 0.00 2.29
3684 5854 9.401058 CCACTTCAATCACCTTCTATATTTTCT 57.599 33.333 0.00 0.00 0.00 2.52
3703 5873 8.862550 ATTTTCTTTATTTCTTCGATGGCATC 57.137 30.769 17.58 17.58 0.00 3.91
3704 5874 7.389803 TTTCTTTATTTCTTCGATGGCATCA 57.610 32.000 25.88 11.30 0.00 3.07
3705 5875 7.389803 TTCTTTATTTCTTCGATGGCATCAA 57.610 32.000 25.88 17.25 0.00 2.57
3706 5876 7.389803 TCTTTATTTCTTCGATGGCATCAAA 57.610 32.000 25.88 18.20 0.00 2.69
3707 5877 7.250569 TCTTTATTTCTTCGATGGCATCAAAC 58.749 34.615 25.88 0.92 0.00 2.93
3708 5878 6.507958 TTATTTCTTCGATGGCATCAAACA 57.492 33.333 25.88 6.59 0.00 2.83
3709 5879 3.829886 TTCTTCGATGGCATCAAACAC 57.170 42.857 25.88 0.00 0.00 3.32
3710 5880 3.057969 TCTTCGATGGCATCAAACACT 57.942 42.857 25.88 0.00 0.00 3.55
3711 5881 3.411446 TCTTCGATGGCATCAAACACTT 58.589 40.909 25.88 0.00 0.00 3.16
3712 5882 3.436704 TCTTCGATGGCATCAAACACTTC 59.563 43.478 25.88 0.00 0.00 3.01
3713 5883 3.057969 TCGATGGCATCAAACACTTCT 57.942 42.857 25.88 0.00 0.00 2.85
3714 5884 3.411446 TCGATGGCATCAAACACTTCTT 58.589 40.909 25.88 0.00 0.00 2.52
3715 5885 4.574892 TCGATGGCATCAAACACTTCTTA 58.425 39.130 25.88 0.00 0.00 2.10
3716 5886 4.391830 TCGATGGCATCAAACACTTCTTAC 59.608 41.667 25.88 0.00 0.00 2.34
3717 5887 4.393062 CGATGGCATCAAACACTTCTTACT 59.607 41.667 25.88 0.00 0.00 2.24
3718 5888 5.580691 CGATGGCATCAAACACTTCTTACTA 59.419 40.000 25.88 0.00 0.00 1.82
3719 5889 6.092122 CGATGGCATCAAACACTTCTTACTAA 59.908 38.462 25.88 0.00 0.00 2.24
3720 5890 6.554334 TGGCATCAAACACTTCTTACTAAC 57.446 37.500 0.00 0.00 0.00 2.34
3721 5891 5.472137 TGGCATCAAACACTTCTTACTAACC 59.528 40.000 0.00 0.00 0.00 2.85
3722 5892 5.106277 GGCATCAAACACTTCTTACTAACCC 60.106 44.000 0.00 0.00 0.00 4.11
3723 5893 5.705905 GCATCAAACACTTCTTACTAACCCT 59.294 40.000 0.00 0.00 0.00 4.34
3724 5894 6.877322 GCATCAAACACTTCTTACTAACCCTA 59.123 38.462 0.00 0.00 0.00 3.53
3725 5895 7.553044 GCATCAAACACTTCTTACTAACCCTAT 59.447 37.037 0.00 0.00 0.00 2.57
3728 5898 8.755977 TCAAACACTTCTTACTAACCCTATAGG 58.244 37.037 12.27 12.27 43.78 2.57
3729 5899 8.755977 CAAACACTTCTTACTAACCCTATAGGA 58.244 37.037 21.07 0.00 39.89 2.94
3730 5900 9.503369 AAACACTTCTTACTAACCCTATAGGAT 57.497 33.333 21.07 10.98 39.89 3.24
3731 5901 8.709272 ACACTTCTTACTAACCCTATAGGATC 57.291 38.462 21.07 0.00 39.89 3.36
3732 5902 7.729431 ACACTTCTTACTAACCCTATAGGATCC 59.271 40.741 21.07 2.48 39.89 3.36
3733 5903 7.728981 CACTTCTTACTAACCCTATAGGATCCA 59.271 40.741 21.07 0.00 39.89 3.41
3734 5904 8.294690 ACTTCTTACTAACCCTATAGGATCCAA 58.705 37.037 21.07 5.52 39.89 3.53
3735 5905 9.155785 CTTCTTACTAACCCTATAGGATCCAAA 57.844 37.037 21.07 1.21 39.89 3.28
3736 5906 9.684702 TTCTTACTAACCCTATAGGATCCAAAT 57.315 33.333 21.07 9.64 39.89 2.32
3737 5907 9.101325 TCTTACTAACCCTATAGGATCCAAATG 57.899 37.037 21.07 3.14 39.89 2.32
3738 5908 6.704056 ACTAACCCTATAGGATCCAAATGG 57.296 41.667 21.07 10.43 39.89 3.16
3739 5909 5.551977 ACTAACCCTATAGGATCCAAATGGG 59.448 44.000 21.07 23.13 39.89 4.00
3740 5910 2.649816 ACCCTATAGGATCCAAATGGGC 59.350 50.000 21.07 0.00 39.89 5.36
3741 5911 2.649312 CCCTATAGGATCCAAATGGGCA 59.351 50.000 21.07 0.00 38.24 5.36
3742 5912 3.270433 CCCTATAGGATCCAAATGGGCAT 59.730 47.826 21.07 0.00 38.24 4.40
3743 5913 4.275810 CCTATAGGATCCAAATGGGCATG 58.724 47.826 14.11 0.00 37.39 4.06
3744 5914 3.909427 ATAGGATCCAAATGGGCATGT 57.091 42.857 15.82 0.00 36.21 3.21
3745 5915 1.784358 AGGATCCAAATGGGCATGTG 58.216 50.000 15.82 0.00 36.21 3.21
3746 5916 1.288633 AGGATCCAAATGGGCATGTGA 59.711 47.619 15.82 0.00 36.21 3.58
3747 5917 2.090943 AGGATCCAAATGGGCATGTGAT 60.091 45.455 15.82 0.00 36.21 3.06
3748 5918 2.701951 GGATCCAAATGGGCATGTGATT 59.298 45.455 6.95 0.00 36.21 2.57
3749 5919 3.243975 GGATCCAAATGGGCATGTGATTC 60.244 47.826 6.95 0.00 36.21 2.52
3750 5920 2.109774 TCCAAATGGGCATGTGATTCC 58.890 47.619 0.00 0.00 36.21 3.01
3751 5921 1.832366 CCAAATGGGCATGTGATTCCA 59.168 47.619 0.00 0.00 0.00 3.53
3752 5922 2.236644 CCAAATGGGCATGTGATTCCAA 59.763 45.455 0.00 0.00 32.56 3.53
3753 5923 3.264104 CAAATGGGCATGTGATTCCAAC 58.736 45.455 0.00 0.00 32.56 3.77
3754 5924 1.488390 ATGGGCATGTGATTCCAACC 58.512 50.000 0.00 0.00 32.56 3.77
3755 5925 0.614415 TGGGCATGTGATTCCAACCC 60.614 55.000 0.00 0.00 36.04 4.11
3756 5926 0.324645 GGGCATGTGATTCCAACCCT 60.325 55.000 0.00 0.00 33.86 4.34
3757 5927 1.064017 GGGCATGTGATTCCAACCCTA 60.064 52.381 0.00 0.00 33.86 3.53
3758 5928 2.622977 GGGCATGTGATTCCAACCCTAA 60.623 50.000 0.00 0.00 33.86 2.69
3759 5929 2.689983 GGCATGTGATTCCAACCCTAAG 59.310 50.000 0.00 0.00 0.00 2.18
3760 5930 3.356290 GCATGTGATTCCAACCCTAAGT 58.644 45.455 0.00 0.00 0.00 2.24
3761 5931 3.763897 GCATGTGATTCCAACCCTAAGTT 59.236 43.478 0.00 0.00 40.16 2.66
3762 5932 4.220602 GCATGTGATTCCAACCCTAAGTTT 59.779 41.667 0.00 0.00 36.18 2.66
3763 5933 5.622233 GCATGTGATTCCAACCCTAAGTTTC 60.622 44.000 0.00 0.00 36.18 2.78
3764 5934 5.319043 TGTGATTCCAACCCTAAGTTTCT 57.681 39.130 0.00 0.00 36.18 2.52
3765 5935 6.442541 TGTGATTCCAACCCTAAGTTTCTA 57.557 37.500 0.00 0.00 36.18 2.10
3766 5936 7.027874 TGTGATTCCAACCCTAAGTTTCTAT 57.972 36.000 0.00 0.00 36.18 1.98
3767 5937 7.466804 TGTGATTCCAACCCTAAGTTTCTATT 58.533 34.615 0.00 0.00 36.18 1.73
3768 5938 7.610305 TGTGATTCCAACCCTAAGTTTCTATTC 59.390 37.037 0.00 0.00 36.18 1.75
3769 5939 7.067129 GTGATTCCAACCCTAAGTTTCTATTCC 59.933 40.741 0.00 0.00 36.18 3.01
3770 5940 5.446260 TCCAACCCTAAGTTTCTATTCCC 57.554 43.478 0.00 0.00 36.18 3.97
3771 5941 5.105853 TCCAACCCTAAGTTTCTATTCCCT 58.894 41.667 0.00 0.00 36.18 4.20
3772 5942 5.191124 TCCAACCCTAAGTTTCTATTCCCTC 59.809 44.000 0.00 0.00 36.18 4.30
3773 5943 5.045140 CCAACCCTAAGTTTCTATTCCCTCA 60.045 44.000 0.00 0.00 36.18 3.86
3774 5944 6.353951 CCAACCCTAAGTTTCTATTCCCTCAT 60.354 42.308 0.00 0.00 36.18 2.90
3775 5945 6.910259 ACCCTAAGTTTCTATTCCCTCATT 57.090 37.500 0.00 0.00 0.00 2.57
3776 5946 7.285340 ACCCTAAGTTTCTATTCCCTCATTT 57.715 36.000 0.00 0.00 0.00 2.32
3777 5947 7.709601 ACCCTAAGTTTCTATTCCCTCATTTT 58.290 34.615 0.00 0.00 0.00 1.82
3778 5948 8.177456 ACCCTAAGTTTCTATTCCCTCATTTTT 58.823 33.333 0.00 0.00 0.00 1.94
3800 5970 8.606040 TTTTTAAATCCTGCAAATCAAAGAGG 57.394 30.769 0.00 0.00 0.00 3.69
3801 5971 7.537596 TTTAAATCCTGCAAATCAAAGAGGA 57.462 32.000 0.00 0.00 37.24 3.71
3802 5972 5.397142 AAATCCTGCAAATCAAAGAGGAC 57.603 39.130 0.00 0.00 35.65 3.85
3803 5973 2.795329 TCCTGCAAATCAAAGAGGACC 58.205 47.619 0.00 0.00 0.00 4.46
3804 5974 2.376518 TCCTGCAAATCAAAGAGGACCT 59.623 45.455 0.00 0.00 0.00 3.85
3805 5975 3.587061 TCCTGCAAATCAAAGAGGACCTA 59.413 43.478 0.00 0.00 0.00 3.08
3806 5976 4.042809 TCCTGCAAATCAAAGAGGACCTAA 59.957 41.667 0.00 0.00 0.00 2.69
3807 5977 4.766891 CCTGCAAATCAAAGAGGACCTAAA 59.233 41.667 0.00 0.00 0.00 1.85
3808 5978 5.243730 CCTGCAAATCAAAGAGGACCTAAAA 59.756 40.000 0.00 0.00 0.00 1.52
3809 5979 6.331369 TGCAAATCAAAGAGGACCTAAAAG 57.669 37.500 0.00 0.00 0.00 2.27
3810 5980 5.833131 TGCAAATCAAAGAGGACCTAAAAGT 59.167 36.000 0.00 0.00 0.00 2.66
3811 5981 6.152379 GCAAATCAAAGAGGACCTAAAAGTG 58.848 40.000 0.00 0.00 0.00 3.16
3812 5982 6.016276 GCAAATCAAAGAGGACCTAAAAGTGA 60.016 38.462 0.00 0.00 0.00 3.41
3813 5983 7.470009 GCAAATCAAAGAGGACCTAAAAGTGAA 60.470 37.037 0.00 0.00 0.00 3.18
3814 5984 7.751768 AATCAAAGAGGACCTAAAAGTGAAG 57.248 36.000 0.00 0.00 0.00 3.02
3815 5985 5.621193 TCAAAGAGGACCTAAAAGTGAAGG 58.379 41.667 0.00 0.00 38.93 3.46
3816 5986 5.368523 TCAAAGAGGACCTAAAAGTGAAGGA 59.631 40.000 0.00 0.00 36.66 3.36
3817 5987 4.893829 AGAGGACCTAAAAGTGAAGGAC 57.106 45.455 0.00 0.00 36.66 3.85
3818 5988 3.583526 AGAGGACCTAAAAGTGAAGGACC 59.416 47.826 0.00 2.20 44.91 4.46
3819 5989 3.323775 AGGACCTAAAAGTGAAGGACCA 58.676 45.455 11.49 0.00 46.37 4.02
3820 5990 3.328050 AGGACCTAAAAGTGAAGGACCAG 59.672 47.826 11.49 0.00 46.37 4.00
3821 5991 3.559384 GGACCTAAAAGTGAAGGACCAGG 60.559 52.174 5.22 0.00 44.25 4.45
3822 5992 2.224793 ACCTAAAAGTGAAGGACCAGGC 60.225 50.000 0.00 0.00 36.66 4.85
3823 5993 2.076863 CTAAAAGTGAAGGACCAGGCG 58.923 52.381 0.00 0.00 0.00 5.52
3824 5994 0.182775 AAAAGTGAAGGACCAGGCGT 59.817 50.000 0.00 0.00 0.00 5.68
3825 5995 0.182775 AAAGTGAAGGACCAGGCGTT 59.817 50.000 0.00 0.00 0.00 4.84
3826 5996 0.250338 AAGTGAAGGACCAGGCGTTC 60.250 55.000 0.00 0.00 34.27 3.95
3827 5997 1.671379 GTGAAGGACCAGGCGTTCC 60.671 63.158 3.63 1.17 33.09 3.62
3828 5998 1.841556 TGAAGGACCAGGCGTTCCT 60.842 57.895 3.63 3.26 45.66 3.36
3829 5999 1.079057 GAAGGACCAGGCGTTCCTC 60.079 63.158 0.24 0.00 41.93 3.71
3830 6000 1.536662 AAGGACCAGGCGTTCCTCT 60.537 57.895 0.24 0.00 41.93 3.69
3831 6001 1.545706 AAGGACCAGGCGTTCCTCTC 61.546 60.000 0.24 0.00 41.93 3.20
3832 6002 2.182030 GACCAGGCGTTCCTCTCG 59.818 66.667 0.00 0.00 41.93 4.04
3833 6003 2.600769 ACCAGGCGTTCCTCTCGT 60.601 61.111 0.00 0.00 41.93 4.18
3834 6004 2.125912 CCAGGCGTTCCTCTCGTG 60.126 66.667 0.00 0.00 41.93 4.35
3835 6005 2.636412 CCAGGCGTTCCTCTCGTGA 61.636 63.158 0.00 0.00 41.93 4.35
3836 6006 1.289066 CAGGCGTTCCTCTCGTGAA 59.711 57.895 0.00 0.00 41.93 3.18
3837 6007 1.009389 CAGGCGTTCCTCTCGTGAAC 61.009 60.000 0.00 0.00 41.93 3.18
3838 6008 1.006571 GGCGTTCCTCTCGTGAACA 60.007 57.895 0.00 0.00 41.70 3.18
3839 6009 1.282930 GGCGTTCCTCTCGTGAACAC 61.283 60.000 0.00 0.00 41.70 3.32
3840 6010 0.318784 GCGTTCCTCTCGTGAACACT 60.319 55.000 3.51 0.00 41.70 3.55
3841 6011 1.868519 GCGTTCCTCTCGTGAACACTT 60.869 52.381 3.51 0.00 41.70 3.16
3842 6012 2.470821 CGTTCCTCTCGTGAACACTTT 58.529 47.619 3.51 0.00 41.70 2.66
3843 6013 2.218759 CGTTCCTCTCGTGAACACTTTG 59.781 50.000 3.51 0.00 41.70 2.77
3844 6014 3.195661 GTTCCTCTCGTGAACACTTTGT 58.804 45.455 3.51 0.00 41.35 2.83
3845 6015 3.536956 TCCTCTCGTGAACACTTTGTT 57.463 42.857 3.51 0.00 44.37 2.83
3852 6022 2.770818 GAACACTTTGTTCGCGCTG 58.229 52.632 5.56 0.00 45.88 5.18
3853 6023 0.303493 GAACACTTTGTTCGCGCTGA 59.697 50.000 5.56 1.08 45.88 4.26
3854 6024 0.304705 AACACTTTGTTCGCGCTGAG 59.695 50.000 5.56 0.00 35.27 3.35
3855 6025 0.529773 ACACTTTGTTCGCGCTGAGA 60.530 50.000 5.56 0.00 0.00 3.27
3856 6026 0.162507 CACTTTGTTCGCGCTGAGAG 59.837 55.000 5.56 0.00 0.00 3.20
3857 6027 0.946221 ACTTTGTTCGCGCTGAGAGG 60.946 55.000 5.56 0.00 0.00 3.69
3858 6028 0.667487 CTTTGTTCGCGCTGAGAGGA 60.667 55.000 5.56 0.00 0.00 3.71
3859 6029 0.944311 TTTGTTCGCGCTGAGAGGAC 60.944 55.000 5.56 0.00 0.00 3.85
3860 6030 1.806461 TTGTTCGCGCTGAGAGGACT 61.806 55.000 5.56 0.00 0.00 3.85
3861 6031 1.803519 GTTCGCGCTGAGAGGACTG 60.804 63.158 5.56 0.00 0.00 3.51
3862 6032 1.971695 TTCGCGCTGAGAGGACTGA 60.972 57.895 5.56 0.00 0.00 3.41
3863 6033 2.201436 TTCGCGCTGAGAGGACTGAC 62.201 60.000 5.56 0.00 0.00 3.51
3864 6034 2.183046 GCGCTGAGAGGACTGACC 59.817 66.667 0.00 0.00 39.35 4.02
3875 6045 1.501582 GGACTGACCTGATAAGGCCT 58.498 55.000 0.00 0.00 36.07 5.19
3876 6046 1.840635 GGACTGACCTGATAAGGCCTT 59.159 52.381 24.18 24.18 36.07 4.35
3877 6047 2.158885 GGACTGACCTGATAAGGCCTTC 60.159 54.545 24.49 9.80 36.07 3.46
3878 6048 2.769095 GACTGACCTGATAAGGCCTTCT 59.231 50.000 24.49 13.31 0.00 2.85
3879 6049 3.185455 ACTGACCTGATAAGGCCTTCTT 58.815 45.455 24.49 11.35 39.40 2.52
3880 6050 3.589288 ACTGACCTGATAAGGCCTTCTTT 59.411 43.478 24.49 8.39 36.93 2.52
3881 6051 3.944015 CTGACCTGATAAGGCCTTCTTTG 59.056 47.826 24.49 11.17 36.93 2.77
3882 6052 3.282885 GACCTGATAAGGCCTTCTTTGG 58.717 50.000 24.49 21.35 36.93 3.28
3883 6053 2.649816 ACCTGATAAGGCCTTCTTTGGT 59.350 45.455 24.49 22.00 36.93 3.67
3884 6054 3.076032 ACCTGATAAGGCCTTCTTTGGTT 59.924 43.478 24.49 8.62 36.93 3.67
3885 6055 4.089361 CCTGATAAGGCCTTCTTTGGTTT 58.911 43.478 24.49 0.00 36.93 3.27
3886 6056 4.082026 CCTGATAAGGCCTTCTTTGGTTTG 60.082 45.833 24.49 3.87 36.93 2.93
3887 6057 4.735369 TGATAAGGCCTTCTTTGGTTTGA 58.265 39.130 24.49 0.00 36.93 2.69
3888 6058 5.144100 TGATAAGGCCTTCTTTGGTTTGAA 58.856 37.500 24.49 0.00 36.93 2.69
3889 6059 5.243730 TGATAAGGCCTTCTTTGGTTTGAAG 59.756 40.000 24.49 0.00 39.32 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.856802 GACAACCACGACCTTACGTT 58.143 50.000 0.00 0.00 44.76 3.99
53 54 1.611592 GCGACAACCACGACCTTACG 61.612 60.000 0.00 0.00 39.31 3.18
54 55 0.598158 TGCGACAACCACGACCTTAC 60.598 55.000 0.00 0.00 0.00 2.34
55 56 0.598158 GTGCGACAACCACGACCTTA 60.598 55.000 0.00 0.00 0.00 2.69
56 57 1.885850 GTGCGACAACCACGACCTT 60.886 57.895 0.00 0.00 0.00 3.50
57 58 2.279918 GTGCGACAACCACGACCT 60.280 61.111 0.00 0.00 0.00 3.85
126 127 3.510846 CCGAGTAGGACTGGTCGG 58.489 66.667 9.01 9.01 45.48 4.79
127 128 1.096386 CCTCCGAGTAGGACTGGTCG 61.096 65.000 0.00 0.00 45.98 4.79
128 129 1.385756 GCCTCCGAGTAGGACTGGTC 61.386 65.000 2.96 0.00 45.98 4.02
147 148 0.320247 GATGTATGCCTCTGCTCCGG 60.320 60.000 0.00 0.00 38.71 5.14
162 163 1.548719 TCGTCCAGATTTGACCGATGT 59.451 47.619 0.00 0.00 0.00 3.06
163 164 1.927174 GTCGTCCAGATTTGACCGATG 59.073 52.381 1.69 0.00 31.96 3.84
164 165 1.469251 CGTCGTCCAGATTTGACCGAT 60.469 52.381 1.69 0.00 31.96 4.18
165 166 0.109458 CGTCGTCCAGATTTGACCGA 60.109 55.000 0.00 0.00 0.00 4.69
196 197 2.742372 CGTGAAGGGAGCGGTTGG 60.742 66.667 0.00 0.00 0.00 3.77
235 236 1.305930 ATTTTCTCGCGGGAGTTGCC 61.306 55.000 26.49 0.00 41.26 4.52
288 289 1.313772 ATGGCGTGTTACTGTTTGCA 58.686 45.000 0.00 0.00 0.00 4.08
289 290 3.757745 ATATGGCGTGTTACTGTTTGC 57.242 42.857 0.00 0.00 0.00 3.68
290 291 5.545658 AGAATATGGCGTGTTACTGTTTG 57.454 39.130 0.00 0.00 0.00 2.93
291 292 5.163893 CGAAGAATATGGCGTGTTACTGTTT 60.164 40.000 0.00 0.00 0.00 2.83
332 333 1.001158 GATTAGCTCGGGTCGGAAGAG 60.001 57.143 0.00 3.05 43.49 2.85
334 335 1.033574 AGATTAGCTCGGGTCGGAAG 58.966 55.000 0.00 0.00 0.00 3.46
335 336 1.952296 GTAGATTAGCTCGGGTCGGAA 59.048 52.381 0.00 0.00 0.00 4.30
339 340 1.602311 TCCGTAGATTAGCTCGGGTC 58.398 55.000 9.16 0.00 42.71 4.46
340 341 1.955080 CTTCCGTAGATTAGCTCGGGT 59.045 52.381 9.16 0.00 42.71 5.28
357 360 1.361668 ATGGTCATGCGACGTGCTTC 61.362 55.000 0.00 0.00 46.63 3.86
367 370 5.279156 GGGAGATTTTTATGGATGGTCATGC 60.279 44.000 0.00 0.00 0.00 4.06
375 378 4.412199 TGGAGTCGGGAGATTTTTATGGAT 59.588 41.667 0.00 0.00 43.27 3.41
383 386 0.108138 CGCTTGGAGTCGGGAGATTT 60.108 55.000 0.00 0.00 43.27 2.17
393 396 0.243095 GTAGGACGAACGCTTGGAGT 59.757 55.000 0.00 0.00 0.00 3.85
400 403 1.226407 GGGTACGTAGGACGAACGC 60.226 63.158 5.94 0.00 46.05 4.84
419 422 8.291740 TGGTTGAAATATGATGATTATTCGCAG 58.708 33.333 0.00 0.00 0.00 5.18
420 423 8.075574 GTGGTTGAAATATGATGATTATTCGCA 58.924 33.333 0.00 0.00 0.00 5.10
444 447 3.803082 CAATGGACCGGCGCAGTG 61.803 66.667 10.83 0.00 0.00 3.66
468 484 2.668550 TCAGTGCTGCTGCTGCTG 60.669 61.111 27.67 23.72 44.66 4.41
469 485 2.668889 GTCAGTGCTGCTGCTGCT 60.669 61.111 27.67 11.56 44.66 4.24
487 503 2.787249 CCACTATGCACGCACAGC 59.213 61.111 0.00 0.00 0.00 4.40
587 603 0.254178 GCTGGTGAGTGGTGATGGAT 59.746 55.000 0.00 0.00 0.00 3.41
588 604 1.126948 TGCTGGTGAGTGGTGATGGA 61.127 55.000 0.00 0.00 0.00 3.41
589 605 0.250858 TTGCTGGTGAGTGGTGATGG 60.251 55.000 0.00 0.00 0.00 3.51
591 607 1.901591 CTTTGCTGGTGAGTGGTGAT 58.098 50.000 0.00 0.00 0.00 3.06
592 608 0.819259 GCTTTGCTGGTGAGTGGTGA 60.819 55.000 0.00 0.00 0.00 4.02
593 609 0.820891 AGCTTTGCTGGTGAGTGGTG 60.821 55.000 0.00 0.00 37.57 4.17
594 610 0.106519 AAGCTTTGCTGGTGAGTGGT 60.107 50.000 0.00 0.00 39.62 4.16
595 611 1.808945 CTAAGCTTTGCTGGTGAGTGG 59.191 52.381 3.20 0.00 39.62 4.00
597 613 1.072965 AGCTAAGCTTTGCTGGTGAGT 59.927 47.619 30.31 8.48 39.62 3.41
598 614 1.818642 AGCTAAGCTTTGCTGGTGAG 58.181 50.000 30.31 9.24 39.62 3.51
642 2485 4.287067 AGGAGTTTATGAGCTCAACAGGAA 59.713 41.667 22.50 8.35 35.06 3.36
650 2493 4.215109 AGAGAGGAGGAGTTTATGAGCTC 58.785 47.826 6.82 6.82 32.84 4.09
675 2518 3.585525 AAAAAGAGGAGGGGGCGGC 62.586 63.158 0.00 0.00 0.00 6.53
738 2587 4.549516 GTAGGGCCGTCGTCTCGC 62.550 72.222 0.00 0.00 0.00 5.03
800 2649 2.202960 TATGCCGCGGCCACTTAC 60.203 61.111 44.42 18.68 41.09 2.34
801 2650 2.108157 CTATGCCGCGGCCACTTA 59.892 61.111 44.42 28.23 41.09 2.24
812 2661 0.398318 GAGACCACCCATCCTATGCC 59.602 60.000 0.00 0.00 0.00 4.40
813 2662 1.346068 GAGAGACCACCCATCCTATGC 59.654 57.143 0.00 0.00 0.00 3.14
814 2663 1.974236 GGAGAGACCACCCATCCTATG 59.026 57.143 0.00 0.00 38.79 2.23
842 2716 2.094649 CGGTACCACTCTGAGAAGGAAC 60.095 54.545 21.56 8.03 0.00 3.62
851 2725 4.470462 GTTATATACGCGGTACCACTCTG 58.530 47.826 12.47 0.00 0.00 3.35
944 2818 5.937540 CCTCTCTTCCTTTCTTTCTCTTTCC 59.062 44.000 0.00 0.00 0.00 3.13
976 2851 2.046507 CCTGGCTGGTGCTCTCAC 60.047 66.667 1.62 0.00 42.40 3.51
991 2866 2.831742 CATCGCCATTGCTGCCCT 60.832 61.111 0.00 0.00 34.43 5.19
993 2868 1.065273 CTTCATCGCCATTGCTGCC 59.935 57.895 0.00 0.00 34.43 4.85
1195 3085 9.293404 GTTTCAGGTAGGTAAAAAGTAAGGAAT 57.707 33.333 0.00 0.00 0.00 3.01
1197 3087 7.226441 GGTTTCAGGTAGGTAAAAAGTAAGGA 58.774 38.462 0.00 0.00 0.00 3.36
1198 3088 6.432162 GGGTTTCAGGTAGGTAAAAAGTAAGG 59.568 42.308 0.00 0.00 0.00 2.69
1202 3092 5.457197 GGAGGGTTTCAGGTAGGTAAAAAGT 60.457 44.000 0.00 0.00 0.00 2.66
1209 3106 0.496841 AGGGAGGGTTTCAGGTAGGT 59.503 55.000 0.00 0.00 0.00 3.08
1211 3108 1.985895 ACAAGGGAGGGTTTCAGGTAG 59.014 52.381 0.00 0.00 0.00 3.18
1225 3122 4.017126 GGAAGAACATAGGGAAACAAGGG 58.983 47.826 0.00 0.00 0.00 3.95
1235 3134 5.529060 GCCATAAGAACAGGAAGAACATAGG 59.471 44.000 0.00 0.00 0.00 2.57
1238 3137 3.941483 CGCCATAAGAACAGGAAGAACAT 59.059 43.478 0.00 0.00 0.00 2.71
1269 3168 1.234821 GAACCTGCGTGTGATCCAAA 58.765 50.000 0.00 0.00 0.00 3.28
1272 3171 2.100631 CCGAACCTGCGTGTGATCC 61.101 63.158 0.00 0.00 0.00 3.36
1280 3179 0.179073 AGATGAATCCCGAACCTGCG 60.179 55.000 0.00 0.00 0.00 5.18
1395 3294 0.179029 ATTAATCGGAGCGGGGTTGG 60.179 55.000 0.00 0.00 0.00 3.77
1440 3339 3.914364 GCTGAAACCGTTGCTTGATTAAG 59.086 43.478 0.00 0.00 36.97 1.85
1446 3345 2.918131 GCTAAGCTGAAACCGTTGCTTG 60.918 50.000 14.48 7.99 44.21 4.01
1471 3585 8.668353 CCATGGATTAACATTAACGGATGATAG 58.332 37.037 5.56 0.00 0.00 2.08
1523 3638 2.606108 CCATGTGACGATTGACGAAGA 58.394 47.619 0.00 0.00 45.77 2.87
1555 3670 8.995220 CAGGTAGTAAATCTCAGCTACTACTAG 58.005 40.741 16.39 8.60 43.78 2.57
1590 3705 5.010617 TGCCATGGTTTTTCCTCTTTAAGAC 59.989 40.000 14.67 0.00 37.07 3.01
1630 3747 2.203640 ACTCACCACGGCCAGAGA 60.204 61.111 2.24 0.00 32.59 3.10
1638 3755 1.142965 TGTCACCACACTCACCACG 59.857 57.895 0.00 0.00 0.00 4.94
1648 3765 1.957177 TCTCTCTCTGTGTGTCACCAC 59.043 52.381 0.00 0.00 42.19 4.16
1649 3766 2.158608 TCTCTCTCTCTGTGTGTCACCA 60.159 50.000 0.00 0.00 32.73 4.17
1651 3768 3.407698 TCTCTCTCTCTCTGTGTGTCAC 58.592 50.000 0.00 0.00 34.56 3.67
1652 3769 3.326297 TCTCTCTCTCTCTCTGTGTGTCA 59.674 47.826 0.00 0.00 0.00 3.58
1653 3770 3.935203 CTCTCTCTCTCTCTCTGTGTGTC 59.065 52.174 0.00 0.00 0.00 3.67
1655 3772 4.186926 CTCTCTCTCTCTCTCTCTGTGTG 58.813 52.174 0.00 0.00 0.00 3.82
1656 3773 3.840666 ACTCTCTCTCTCTCTCTCTGTGT 59.159 47.826 0.00 0.00 0.00 3.72
1659 3776 4.502259 GCCTACTCTCTCTCTCTCTCTCTG 60.502 54.167 0.00 0.00 0.00 3.35
1660 3777 3.643792 GCCTACTCTCTCTCTCTCTCTCT 59.356 52.174 0.00 0.00 0.00 3.10
1661 3778 3.388024 TGCCTACTCTCTCTCTCTCTCTC 59.612 52.174 0.00 0.00 0.00 3.20
1662 3779 3.384168 TGCCTACTCTCTCTCTCTCTCT 58.616 50.000 0.00 0.00 0.00 3.10
1663 3780 3.495100 CCTGCCTACTCTCTCTCTCTCTC 60.495 56.522 0.00 0.00 0.00 3.20
1664 3781 2.439507 CCTGCCTACTCTCTCTCTCTCT 59.560 54.545 0.00 0.00 0.00 3.10
1665 3782 2.851195 CCTGCCTACTCTCTCTCTCTC 58.149 57.143 0.00 0.00 0.00 3.20
1666 3783 1.133792 GCCTGCCTACTCTCTCTCTCT 60.134 57.143 0.00 0.00 0.00 3.10
1667 3784 1.318576 GCCTGCCTACTCTCTCTCTC 58.681 60.000 0.00 0.00 0.00 3.20
1668 3785 0.628522 TGCCTGCCTACTCTCTCTCT 59.371 55.000 0.00 0.00 0.00 3.10
1669 3786 1.136110 GTTGCCTGCCTACTCTCTCTC 59.864 57.143 0.00 0.00 0.00 3.20
1670 3787 1.190643 GTTGCCTGCCTACTCTCTCT 58.809 55.000 0.00 0.00 0.00 3.10
1671 3788 0.898320 TGTTGCCTGCCTACTCTCTC 59.102 55.000 0.00 0.00 0.00 3.20
1672 3789 0.901124 CTGTTGCCTGCCTACTCTCT 59.099 55.000 0.00 0.00 0.00 3.10
1673 3790 0.107945 CCTGTTGCCTGCCTACTCTC 60.108 60.000 0.00 0.00 0.00 3.20
1674 3791 1.557269 CCCTGTTGCCTGCCTACTCT 61.557 60.000 0.00 0.00 0.00 3.24
1675 3792 1.078143 CCCTGTTGCCTGCCTACTC 60.078 63.158 0.00 0.00 0.00 2.59
1676 3793 3.081554 CCCTGTTGCCTGCCTACT 58.918 61.111 0.00 0.00 0.00 2.57
1677 3794 2.751837 GCCCTGTTGCCTGCCTAC 60.752 66.667 0.00 0.00 0.00 3.18
1678 3795 4.408821 CGCCCTGTTGCCTGCCTA 62.409 66.667 0.00 0.00 0.00 3.93
1710 3827 0.464013 TGAAGGCCCGAAAACGAACA 60.464 50.000 0.00 0.00 0.00 3.18
1783 3901 4.451150 GCGCGTGACAGGGATGGA 62.451 66.667 8.43 0.00 0.00 3.41
1784 3902 4.457496 AGCGCGTGACAGGGATGG 62.457 66.667 8.43 0.00 0.00 3.51
1785 3903 2.887568 GAGCGCGTGACAGGGATG 60.888 66.667 8.43 0.00 0.00 3.51
1786 3904 3.069980 GAGAGCGCGTGACAGGGAT 62.070 63.158 8.43 0.00 0.00 3.85
1787 3905 3.749064 GAGAGCGCGTGACAGGGA 61.749 66.667 8.43 0.00 0.00 4.20
1806 3924 1.895707 GCTGATGAATGCGGAGGGG 60.896 63.158 0.00 0.00 0.00 4.79
1809 3927 0.179065 TGAGGCTGATGAATGCGGAG 60.179 55.000 0.00 0.00 0.00 4.63
1860 3981 7.275341 CCCTCGTATACTCTGACGTATTAGTAG 59.725 44.444 0.56 2.59 40.00 2.57
1861 3982 7.039714 TCCCTCGTATACTCTGACGTATTAGTA 60.040 40.741 0.56 6.00 40.00 1.82
1862 3983 5.931146 CCCTCGTATACTCTGACGTATTAGT 59.069 44.000 0.56 0.00 40.00 2.24
1929 4056 2.038295 CTCCCTCCATCTATTCACTGGC 59.962 54.545 0.00 0.00 0.00 4.85
1930 4057 3.312890 ACTCCCTCCATCTATTCACTGG 58.687 50.000 0.00 0.00 0.00 4.00
1932 4059 4.585162 CGTTACTCCCTCCATCTATTCACT 59.415 45.833 0.00 0.00 0.00 3.41
1936 4063 5.452255 TGTACGTTACTCCCTCCATCTATT 58.548 41.667 0.00 0.00 0.00 1.73
1937 4064 5.057843 TGTACGTTACTCCCTCCATCTAT 57.942 43.478 0.00 0.00 0.00 1.98
1950 4077 8.971321 CCATACCAAATATGTACTGTACGTTAC 58.029 37.037 17.06 0.00 39.36 2.50
1979 4112 3.625764 ACTGTAACGTGTTTGTGCAATCT 59.374 39.130 0.00 0.00 0.00 2.40
1981 4114 4.095782 AGAACTGTAACGTGTTTGTGCAAT 59.904 37.500 0.00 0.00 0.00 3.56
1982 4115 3.437395 AGAACTGTAACGTGTTTGTGCAA 59.563 39.130 0.00 0.00 0.00 4.08
1983 4116 3.004171 AGAACTGTAACGTGTTTGTGCA 58.996 40.909 0.00 0.00 0.00 4.57
1984 4117 3.668596 AGAACTGTAACGTGTTTGTGC 57.331 42.857 0.00 0.00 0.00 4.57
1985 4118 6.996106 TCTTTAGAACTGTAACGTGTTTGTG 58.004 36.000 0.00 0.00 0.00 3.33
1996 4129 8.459635 CACAGCAGTACTATCTTTAGAACTGTA 58.540 37.037 0.00 0.80 32.60 2.74
2041 4191 5.236047 CCACAACAACAAAATACCACCATTG 59.764 40.000 0.00 0.00 0.00 2.82
2059 4209 2.353839 CAGCTGCAACGCCACAAC 60.354 61.111 0.00 0.00 0.00 3.32
2172 4322 4.084888 GTGCTGCCGTTGCCGTAC 62.085 66.667 0.00 0.00 36.33 3.67
2288 4438 0.173481 GGTGAGAGTGCTGATGCGTA 59.827 55.000 0.00 0.00 43.34 4.42
2290 4440 2.163390 CGGTGAGAGTGCTGATGCG 61.163 63.158 0.00 0.00 43.34 4.73
2291 4441 2.459442 GCGGTGAGAGTGCTGATGC 61.459 63.158 0.00 0.00 40.20 3.91
2292 4442 1.079612 TGCGGTGAGAGTGCTGATG 60.080 57.895 0.00 0.00 0.00 3.07
2293 4443 1.079543 GTGCGGTGAGAGTGCTGAT 60.080 57.895 0.00 0.00 0.00 2.90
2294 4444 2.340078 GTGCGGTGAGAGTGCTGA 59.660 61.111 0.00 0.00 0.00 4.26
2297 4451 0.099968 TATACGTGCGGTGAGAGTGC 59.900 55.000 0.00 0.00 0.00 4.40
2302 4456 1.400846 ACAGTCTATACGTGCGGTGAG 59.599 52.381 0.00 0.00 0.00 3.51
2303 4457 1.456296 ACAGTCTATACGTGCGGTGA 58.544 50.000 0.00 0.00 0.00 4.02
2307 4461 5.504392 TGTATTGTACAGTCTATACGTGCG 58.496 41.667 0.00 0.00 34.06 5.34
2310 4464 7.487189 GCACTTTGTATTGTACAGTCTATACGT 59.513 37.037 9.69 0.00 40.24 3.57
2311 4465 7.486870 TGCACTTTGTATTGTACAGTCTATACG 59.513 37.037 9.69 0.00 40.24 3.06
2312 4466 8.697846 TGCACTTTGTATTGTACAGTCTATAC 57.302 34.615 8.03 8.03 40.24 1.47
2314 4468 7.280876 CCATGCACTTTGTATTGTACAGTCTAT 59.719 37.037 0.00 0.00 40.24 1.98
2315 4469 6.593770 CCATGCACTTTGTATTGTACAGTCTA 59.406 38.462 0.00 0.00 40.24 2.59
2317 4471 5.631026 CCATGCACTTTGTATTGTACAGTC 58.369 41.667 0.00 0.00 40.24 3.51
2318 4472 4.082787 GCCATGCACTTTGTATTGTACAGT 60.083 41.667 0.00 0.00 40.24 3.55
2319 4473 4.082841 TGCCATGCACTTTGTATTGTACAG 60.083 41.667 0.00 0.00 35.03 2.74
2320 4474 3.823304 TGCCATGCACTTTGTATTGTACA 59.177 39.130 0.00 0.00 32.76 2.90
2324 4478 3.191669 CCATGCCATGCACTTTGTATTG 58.808 45.455 0.00 0.00 43.04 1.90
2340 4494 3.104766 CATCGTCAGTGGCCATGC 58.895 61.111 9.72 0.00 0.00 4.06
2341 4495 2.816360 CGCATCGTCAGTGGCCATG 61.816 63.158 9.72 8.88 0.00 3.66
2342 4496 2.512286 CGCATCGTCAGTGGCCAT 60.512 61.111 9.72 0.00 0.00 4.40
2663 4817 4.764336 CGCGTAGTCGGCCGTCAA 62.764 66.667 27.15 8.61 37.56 3.18
2947 5101 5.481824 TCCATAGCCATTAGTATCCTGTCAG 59.518 44.000 0.00 0.00 0.00 3.51
2956 5110 9.812347 AATCAATCAAATCCATAGCCATTAGTA 57.188 29.630 0.00 0.00 0.00 1.82
3010 5164 3.568853 CCTACGACCAACCTATACAGAGG 59.431 52.174 0.00 0.00 42.89 3.69
3090 5244 6.176183 ACCTGATCATATTATTAGCTGCCAC 58.824 40.000 0.00 0.00 0.00 5.01
3120 5274 6.070767 ACTGAAGCTGAAAGTAGCCATAGTAA 60.071 38.462 0.00 0.00 44.76 2.24
3123 5277 4.764172 ACTGAAGCTGAAAGTAGCCATAG 58.236 43.478 0.00 0.00 44.76 2.23
3124 5278 4.826274 ACTGAAGCTGAAAGTAGCCATA 57.174 40.909 0.00 0.00 44.76 2.74
3137 5291 2.868899 CCTTTGGAGGAAACTGAAGCT 58.131 47.619 0.00 0.00 46.74 3.74
3143 5297 0.555769 TGGTGCCTTTGGAGGAAACT 59.444 50.000 0.00 0.00 46.74 2.66
3144 5298 1.632589 ATGGTGCCTTTGGAGGAAAC 58.367 50.000 0.00 0.00 46.74 2.78
3156 5310 5.759763 ACAAAATCTTTCTGAAAATGGTGCC 59.240 36.000 4.18 0.00 0.00 5.01
3170 5324 3.882888 TCGAGCACTGGAACAAAATCTTT 59.117 39.130 0.00 0.00 38.70 2.52
3196 5350 7.171678 GCTATAGGGTATTGTGAAGTTGTGATC 59.828 40.741 1.04 0.00 0.00 2.92
3199 5353 5.527582 GGCTATAGGGTATTGTGAAGTTGTG 59.472 44.000 1.04 0.00 0.00 3.33
3226 5380 5.961843 GCGACATGATTTGATTACTTCTGTG 59.038 40.000 0.00 0.00 0.00 3.66
3229 5383 4.576463 GGGCGACATGATTTGATTACTTCT 59.424 41.667 0.00 0.00 0.00 2.85
3230 5384 4.261197 GGGGCGACATGATTTGATTACTTC 60.261 45.833 0.00 0.00 0.00 3.01
3231 5385 3.632145 GGGGCGACATGATTTGATTACTT 59.368 43.478 0.00 0.00 0.00 2.24
3283 5448 6.147821 CGAAATCCCGTGATTAATATTGCTCT 59.852 38.462 0.00 0.00 40.34 4.09
3333 5498 2.509336 CCGTGCTGTCCGTGATCC 60.509 66.667 0.00 0.00 0.00 3.36
3366 5531 1.751924 ACCTAGCGCAAAACACCAAAA 59.248 42.857 11.47 0.00 0.00 2.44
3382 5547 3.828451 ACGGGCGAATAAAGCTATACCTA 59.172 43.478 0.00 0.00 34.52 3.08
3383 5548 2.631545 ACGGGCGAATAAAGCTATACCT 59.368 45.455 0.00 0.00 34.52 3.08
3384 5549 3.036075 ACGGGCGAATAAAGCTATACC 57.964 47.619 0.00 0.00 34.52 2.73
3385 5550 4.053295 TGAACGGGCGAATAAAGCTATAC 58.947 43.478 0.00 0.00 34.52 1.47
3386 5551 4.202182 ACTGAACGGGCGAATAAAGCTATA 60.202 41.667 0.00 0.00 34.52 1.31
3387 5552 3.131396 CTGAACGGGCGAATAAAGCTAT 58.869 45.455 0.00 0.00 34.52 2.97
3408 5573 1.069432 CACACTGTGCTCTGCATGAAC 60.069 52.381 7.90 0.00 41.91 3.18
3474 5639 0.259065 TCTCGGATACAGGAGGCAGT 59.741 55.000 0.00 0.00 0.00 4.40
3500 5665 4.399303 CGTTTGATTCAAAGGAGGCCTTAT 59.601 41.667 21.52 0.00 43.92 1.73
3501 5666 3.756434 CGTTTGATTCAAAGGAGGCCTTA 59.244 43.478 21.52 0.00 43.92 2.69
3509 5679 2.095059 CAGGGCTCGTTTGATTCAAAGG 60.095 50.000 20.51 20.51 39.57 3.11
3527 5697 5.165961 TCAATCCTCAAAAGTCCTACAGG 57.834 43.478 0.00 0.00 0.00 4.00
3573 5743 7.230027 GGATCCAGTCCTATGAATCAAAGAAT 58.770 38.462 6.95 0.00 44.16 2.40
3575 5745 5.072329 GGGATCCAGTCCTATGAATCAAAGA 59.928 44.000 15.23 0.00 46.91 2.52
3582 5752 5.354184 TCTATGGGATCCAGTCCTATGAA 57.646 43.478 15.23 0.00 46.64 2.57
3583 5753 5.354184 TTCTATGGGATCCAGTCCTATGA 57.646 43.478 15.23 0.00 46.64 2.15
3584 5754 6.633325 ATTTCTATGGGATCCAGTCCTATG 57.367 41.667 15.23 0.00 46.64 2.23
3586 5756 8.757307 AAATATTTCTATGGGATCCAGTCCTA 57.243 34.615 15.23 0.00 46.91 2.94
3587 5757 7.654287 AAATATTTCTATGGGATCCAGTCCT 57.346 36.000 15.23 0.00 46.91 3.85
3639 5809 9.958180 TGAAGTGGATGTTAGATTTTCTATGAA 57.042 29.630 0.00 0.00 0.00 2.57
3640 5810 9.958180 TTGAAGTGGATGTTAGATTTTCTATGA 57.042 29.630 0.00 0.00 0.00 2.15
3643 5813 9.958180 TGATTGAAGTGGATGTTAGATTTTCTA 57.042 29.630 0.00 0.00 0.00 2.10
3644 5814 8.734386 GTGATTGAAGTGGATGTTAGATTTTCT 58.266 33.333 0.00 0.00 0.00 2.52
3645 5815 7.970614 GGTGATTGAAGTGGATGTTAGATTTTC 59.029 37.037 0.00 0.00 0.00 2.29
3646 5816 7.671398 AGGTGATTGAAGTGGATGTTAGATTTT 59.329 33.333 0.00 0.00 0.00 1.82
3647 5817 7.177878 AGGTGATTGAAGTGGATGTTAGATTT 58.822 34.615 0.00 0.00 0.00 2.17
3648 5818 6.725364 AGGTGATTGAAGTGGATGTTAGATT 58.275 36.000 0.00 0.00 0.00 2.40
3649 5819 6.319048 AGGTGATTGAAGTGGATGTTAGAT 57.681 37.500 0.00 0.00 0.00 1.98
3650 5820 5.762179 AGGTGATTGAAGTGGATGTTAGA 57.238 39.130 0.00 0.00 0.00 2.10
3651 5821 6.176183 AGAAGGTGATTGAAGTGGATGTTAG 58.824 40.000 0.00 0.00 0.00 2.34
3652 5822 6.126863 AGAAGGTGATTGAAGTGGATGTTA 57.873 37.500 0.00 0.00 0.00 2.41
3653 5823 4.990526 AGAAGGTGATTGAAGTGGATGTT 58.009 39.130 0.00 0.00 0.00 2.71
3654 5824 4.647564 AGAAGGTGATTGAAGTGGATGT 57.352 40.909 0.00 0.00 0.00 3.06
3655 5825 8.915057 AATATAGAAGGTGATTGAAGTGGATG 57.085 34.615 0.00 0.00 0.00 3.51
3656 5826 9.927081 AAAATATAGAAGGTGATTGAAGTGGAT 57.073 29.630 0.00 0.00 0.00 3.41
3657 5827 9.396022 GAAAATATAGAAGGTGATTGAAGTGGA 57.604 33.333 0.00 0.00 0.00 4.02
3658 5828 9.401058 AGAAAATATAGAAGGTGATTGAAGTGG 57.599 33.333 0.00 0.00 0.00 4.00
3677 5847 9.950680 GATGCCATCGAAGAAATAAAGAAAATA 57.049 29.630 0.00 0.00 43.58 1.40
3678 5848 8.469200 TGATGCCATCGAAGAAATAAAGAAAAT 58.531 29.630 0.00 0.00 43.58 1.82
3679 5849 7.825681 TGATGCCATCGAAGAAATAAAGAAAA 58.174 30.769 0.00 0.00 43.58 2.29
3680 5850 7.389803 TGATGCCATCGAAGAAATAAAGAAA 57.610 32.000 0.00 0.00 43.58 2.52
3681 5851 7.389803 TTGATGCCATCGAAGAAATAAAGAA 57.610 32.000 0.00 0.00 43.58 2.52
3682 5852 7.094420 TGTTTGATGCCATCGAAGAAATAAAGA 60.094 33.333 7.63 0.00 43.58 2.52
3683 5853 7.008628 GTGTTTGATGCCATCGAAGAAATAAAG 59.991 37.037 7.63 0.00 43.58 1.85
3684 5854 6.806249 GTGTTTGATGCCATCGAAGAAATAAA 59.194 34.615 7.63 0.00 43.58 1.40
3685 5855 6.150976 AGTGTTTGATGCCATCGAAGAAATAA 59.849 34.615 7.63 0.00 43.58 1.40
3686 5856 5.647658 AGTGTTTGATGCCATCGAAGAAATA 59.352 36.000 7.63 0.00 43.58 1.40
3687 5857 4.460382 AGTGTTTGATGCCATCGAAGAAAT 59.540 37.500 7.63 0.00 43.58 2.17
3688 5858 3.820467 AGTGTTTGATGCCATCGAAGAAA 59.180 39.130 7.63 0.00 43.58 2.52
3689 5859 3.411446 AGTGTTTGATGCCATCGAAGAA 58.589 40.909 7.63 0.00 43.58 2.52
3690 5860 3.057969 AGTGTTTGATGCCATCGAAGA 57.942 42.857 7.63 4.00 45.75 2.87
3691 5861 3.438087 AGAAGTGTTTGATGCCATCGAAG 59.562 43.478 7.63 0.00 33.48 3.79
3692 5862 3.411446 AGAAGTGTTTGATGCCATCGAA 58.589 40.909 3.13 3.13 0.00 3.71
3693 5863 3.057969 AGAAGTGTTTGATGCCATCGA 57.942 42.857 0.00 0.00 0.00 3.59
3694 5864 3.837213 AAGAAGTGTTTGATGCCATCG 57.163 42.857 0.00 0.00 0.00 3.84
3695 5865 5.886960 AGTAAGAAGTGTTTGATGCCATC 57.113 39.130 0.00 0.00 0.00 3.51
3696 5866 6.151144 GGTTAGTAAGAAGTGTTTGATGCCAT 59.849 38.462 0.00 0.00 0.00 4.40
3697 5867 5.472137 GGTTAGTAAGAAGTGTTTGATGCCA 59.528 40.000 0.00 0.00 0.00 4.92
3698 5868 5.106277 GGGTTAGTAAGAAGTGTTTGATGCC 60.106 44.000 0.00 0.00 0.00 4.40
3699 5869 5.705905 AGGGTTAGTAAGAAGTGTTTGATGC 59.294 40.000 0.00 0.00 0.00 3.91
3702 5872 8.755977 CCTATAGGGTTAGTAAGAAGTGTTTGA 58.244 37.037 11.33 0.00 0.00 2.69
3703 5873 8.755977 TCCTATAGGGTTAGTAAGAAGTGTTTG 58.244 37.037 18.97 0.00 36.25 2.93
3704 5874 8.906238 TCCTATAGGGTTAGTAAGAAGTGTTT 57.094 34.615 18.97 0.00 36.25 2.83
3705 5875 9.145442 GATCCTATAGGGTTAGTAAGAAGTGTT 57.855 37.037 18.97 0.00 36.25 3.32
3706 5876 7.729431 GGATCCTATAGGGTTAGTAAGAAGTGT 59.271 40.741 18.97 0.00 36.25 3.55
3707 5877 7.728981 TGGATCCTATAGGGTTAGTAAGAAGTG 59.271 40.741 18.97 0.00 36.25 3.16
3708 5878 7.834046 TGGATCCTATAGGGTTAGTAAGAAGT 58.166 38.462 18.97 0.00 36.25 3.01
3709 5879 8.722622 TTGGATCCTATAGGGTTAGTAAGAAG 57.277 38.462 18.97 0.00 36.25 2.85
3710 5880 9.684702 ATTTGGATCCTATAGGGTTAGTAAGAA 57.315 33.333 18.97 2.37 36.25 2.52
3711 5881 9.101325 CATTTGGATCCTATAGGGTTAGTAAGA 57.899 37.037 18.97 0.00 36.25 2.10
3712 5882 8.322091 CCATTTGGATCCTATAGGGTTAGTAAG 58.678 40.741 18.97 2.65 37.39 2.34
3713 5883 7.238933 CCCATTTGGATCCTATAGGGTTAGTAA 59.761 40.741 18.97 5.74 37.39 2.24
3714 5884 6.733807 CCCATTTGGATCCTATAGGGTTAGTA 59.266 42.308 18.97 0.00 37.39 1.82
3715 5885 5.551977 CCCATTTGGATCCTATAGGGTTAGT 59.448 44.000 18.97 0.51 37.39 2.24
3716 5886 5.573707 GCCCATTTGGATCCTATAGGGTTAG 60.574 48.000 24.40 8.64 37.38 2.34
3717 5887 4.291249 GCCCATTTGGATCCTATAGGGTTA 59.709 45.833 24.40 2.42 37.38 2.85
3718 5888 3.076032 GCCCATTTGGATCCTATAGGGTT 59.924 47.826 24.40 6.89 37.38 4.11
3719 5889 2.649816 GCCCATTTGGATCCTATAGGGT 59.350 50.000 24.40 12.31 37.38 4.34
3720 5890 2.649312 TGCCCATTTGGATCCTATAGGG 59.351 50.000 21.57 21.57 37.39 3.53
3721 5891 4.264083 ACATGCCCATTTGGATCCTATAGG 60.264 45.833 13.07 13.07 37.39 2.57
3722 5892 4.703575 CACATGCCCATTTGGATCCTATAG 59.296 45.833 14.23 0.92 37.39 1.31
3723 5893 4.353489 TCACATGCCCATTTGGATCCTATA 59.647 41.667 14.23 0.00 37.39 1.31
3724 5894 3.140707 TCACATGCCCATTTGGATCCTAT 59.859 43.478 14.23 3.64 37.39 2.57
3725 5895 2.513317 TCACATGCCCATTTGGATCCTA 59.487 45.455 14.23 1.56 37.39 2.94
3726 5896 1.288633 TCACATGCCCATTTGGATCCT 59.711 47.619 14.23 0.00 37.39 3.24
3727 5897 1.779221 TCACATGCCCATTTGGATCC 58.221 50.000 4.20 4.20 37.39 3.36
3728 5898 3.243975 GGAATCACATGCCCATTTGGATC 60.244 47.826 0.00 0.00 37.39 3.36
3729 5899 2.701951 GGAATCACATGCCCATTTGGAT 59.298 45.455 0.00 0.00 37.39 3.41
3730 5900 2.109774 GGAATCACATGCCCATTTGGA 58.890 47.619 0.00 0.00 37.39 3.53
3731 5901 1.832366 TGGAATCACATGCCCATTTGG 59.168 47.619 0.00 0.00 37.09 3.28
3732 5902 3.264104 GTTGGAATCACATGCCCATTTG 58.736 45.455 0.00 0.00 0.00 2.32
3733 5903 2.236893 GGTTGGAATCACATGCCCATTT 59.763 45.455 0.00 0.00 0.00 2.32
3734 5904 1.832998 GGTTGGAATCACATGCCCATT 59.167 47.619 0.00 0.00 0.00 3.16
3735 5905 1.488390 GGTTGGAATCACATGCCCAT 58.512 50.000 0.00 0.00 0.00 4.00
3736 5906 0.614415 GGGTTGGAATCACATGCCCA 60.614 55.000 0.00 0.00 36.51 5.36
3737 5907 0.324645 AGGGTTGGAATCACATGCCC 60.325 55.000 0.00 0.00 36.65 5.36
3738 5908 2.435372 TAGGGTTGGAATCACATGCC 57.565 50.000 0.00 0.00 0.00 4.40
3739 5909 3.356290 ACTTAGGGTTGGAATCACATGC 58.644 45.455 0.00 0.00 0.00 4.06
3740 5910 5.711976 AGAAACTTAGGGTTGGAATCACATG 59.288 40.000 0.00 0.00 38.29 3.21
3741 5911 5.892348 AGAAACTTAGGGTTGGAATCACAT 58.108 37.500 0.00 0.00 38.29 3.21
3742 5912 5.319043 AGAAACTTAGGGTTGGAATCACA 57.681 39.130 0.00 0.00 38.29 3.58
3743 5913 7.067129 GGAATAGAAACTTAGGGTTGGAATCAC 59.933 40.741 0.00 0.00 38.29 3.06
3744 5914 7.116736 GGAATAGAAACTTAGGGTTGGAATCA 58.883 38.462 0.00 0.00 38.29 2.57
3745 5915 6.546403 GGGAATAGAAACTTAGGGTTGGAATC 59.454 42.308 0.00 0.00 38.29 2.52
3746 5916 6.219772 AGGGAATAGAAACTTAGGGTTGGAAT 59.780 38.462 0.00 0.00 38.29 3.01
3747 5917 5.554350 AGGGAATAGAAACTTAGGGTTGGAA 59.446 40.000 0.00 0.00 38.29 3.53
3748 5918 5.105853 AGGGAATAGAAACTTAGGGTTGGA 58.894 41.667 0.00 0.00 38.29 3.53
3749 5919 5.045140 TGAGGGAATAGAAACTTAGGGTTGG 60.045 44.000 0.00 0.00 38.29 3.77
3750 5920 6.062258 TGAGGGAATAGAAACTTAGGGTTG 57.938 41.667 0.00 0.00 38.29 3.77
3751 5921 6.910259 ATGAGGGAATAGAAACTTAGGGTT 57.090 37.500 0.00 0.00 40.28 4.11
3752 5922 6.910259 AATGAGGGAATAGAAACTTAGGGT 57.090 37.500 0.00 0.00 0.00 4.34
3753 5923 8.595362 AAAAATGAGGGAATAGAAACTTAGGG 57.405 34.615 0.00 0.00 0.00 3.53
3775 5945 8.428063 TCCTCTTTGATTTGCAGGATTTAAAAA 58.572 29.630 0.00 0.00 0.00 1.94
3776 5946 7.872483 GTCCTCTTTGATTTGCAGGATTTAAAA 59.128 33.333 0.00 0.00 35.69 1.52
3777 5947 7.378181 GTCCTCTTTGATTTGCAGGATTTAAA 58.622 34.615 0.00 0.00 35.69 1.52
3778 5948 6.071391 GGTCCTCTTTGATTTGCAGGATTTAA 60.071 38.462 0.00 0.00 35.69 1.52
3779 5949 5.418840 GGTCCTCTTTGATTTGCAGGATTTA 59.581 40.000 0.00 0.00 35.69 1.40
3780 5950 4.221482 GGTCCTCTTTGATTTGCAGGATTT 59.779 41.667 0.00 0.00 35.69 2.17
3781 5951 3.766051 GGTCCTCTTTGATTTGCAGGATT 59.234 43.478 0.00 0.00 35.69 3.01
3782 5952 3.011032 AGGTCCTCTTTGATTTGCAGGAT 59.989 43.478 0.00 0.00 35.69 3.24
3783 5953 2.376518 AGGTCCTCTTTGATTTGCAGGA 59.623 45.455 0.00 0.00 0.00 3.86
3784 5954 2.800250 AGGTCCTCTTTGATTTGCAGG 58.200 47.619 0.00 0.00 0.00 4.85
3785 5955 5.964958 TTTAGGTCCTCTTTGATTTGCAG 57.035 39.130 0.00 0.00 0.00 4.41
3786 5956 5.833131 ACTTTTAGGTCCTCTTTGATTTGCA 59.167 36.000 0.00 0.00 0.00 4.08
3787 5957 6.016276 TCACTTTTAGGTCCTCTTTGATTTGC 60.016 38.462 0.00 0.00 0.00 3.68
3788 5958 7.510549 TCACTTTTAGGTCCTCTTTGATTTG 57.489 36.000 0.00 0.00 0.00 2.32
3789 5959 7.231519 CCTTCACTTTTAGGTCCTCTTTGATTT 59.768 37.037 0.00 0.00 0.00 2.17
3790 5960 6.717084 CCTTCACTTTTAGGTCCTCTTTGATT 59.283 38.462 0.00 0.00 0.00 2.57
3791 5961 6.044404 TCCTTCACTTTTAGGTCCTCTTTGAT 59.956 38.462 0.00 0.00 33.15 2.57
3792 5962 5.368523 TCCTTCACTTTTAGGTCCTCTTTGA 59.631 40.000 0.00 0.00 33.15 2.69
3793 5963 5.470437 GTCCTTCACTTTTAGGTCCTCTTTG 59.530 44.000 0.00 0.00 33.15 2.77
3794 5964 5.456330 GGTCCTTCACTTTTAGGTCCTCTTT 60.456 44.000 0.00 0.00 36.96 2.52
3795 5965 4.041815 GGTCCTTCACTTTTAGGTCCTCTT 59.958 45.833 0.00 0.00 36.96 2.85
3796 5966 3.583526 GGTCCTTCACTTTTAGGTCCTCT 59.416 47.826 0.00 0.00 36.96 3.69
3797 5967 3.326880 TGGTCCTTCACTTTTAGGTCCTC 59.673 47.826 0.00 0.00 39.55 3.71
3798 5968 3.323775 TGGTCCTTCACTTTTAGGTCCT 58.676 45.455 0.00 0.00 39.55 3.85
3799 5969 3.559384 CCTGGTCCTTCACTTTTAGGTCC 60.559 52.174 0.00 0.00 39.36 4.46
3800 5970 3.676093 CCTGGTCCTTCACTTTTAGGTC 58.324 50.000 0.00 0.00 33.15 3.85
3801 5971 2.224793 GCCTGGTCCTTCACTTTTAGGT 60.225 50.000 0.00 0.00 33.15 3.08
3802 5972 2.437413 GCCTGGTCCTTCACTTTTAGG 58.563 52.381 0.00 0.00 0.00 2.69
3803 5973 2.076863 CGCCTGGTCCTTCACTTTTAG 58.923 52.381 0.00 0.00 0.00 1.85
3804 5974 1.418637 ACGCCTGGTCCTTCACTTTTA 59.581 47.619 0.00 0.00 0.00 1.52
3805 5975 0.182775 ACGCCTGGTCCTTCACTTTT 59.817 50.000 0.00 0.00 0.00 2.27
3806 5976 0.182775 AACGCCTGGTCCTTCACTTT 59.817 50.000 0.00 0.00 0.00 2.66
3807 5977 0.250338 GAACGCCTGGTCCTTCACTT 60.250 55.000 0.00 0.00 0.00 3.16
3808 5978 1.371558 GAACGCCTGGTCCTTCACT 59.628 57.895 0.00 0.00 0.00 3.41
3809 5979 1.671379 GGAACGCCTGGTCCTTCAC 60.671 63.158 0.00 0.00 0.00 3.18
3810 5980 1.841556 AGGAACGCCTGGTCCTTCA 60.842 57.895 0.00 0.00 44.90 3.02
3811 5981 3.069778 AGGAACGCCTGGTCCTTC 58.930 61.111 0.00 0.00 44.90 3.46
3820 5990 1.006571 TGTTCACGAGAGGAACGCC 60.007 57.895 0.00 0.00 45.86 5.68
3821 5991 2.142641 GTGTTCACGAGAGGAACGC 58.857 57.895 0.00 0.00 45.86 4.84
3822 5992 2.135664 AAGTGTTCACGAGAGGAACG 57.864 50.000 0.00 0.00 45.86 3.95
3823 5993 3.195661 ACAAAGTGTTCACGAGAGGAAC 58.804 45.455 0.00 0.00 43.78 3.62
3824 5994 3.536956 ACAAAGTGTTCACGAGAGGAA 57.463 42.857 0.00 0.00 0.00 3.36
3825 5995 3.536956 AACAAAGTGTTCACGAGAGGA 57.463 42.857 0.00 0.00 35.27 3.71
3835 6005 0.304705 CTCAGCGCGAACAAAGTGTT 59.695 50.000 12.10 0.00 44.37 3.32
3836 6006 0.529773 TCTCAGCGCGAACAAAGTGT 60.530 50.000 12.10 0.00 0.00 3.55
3837 6007 0.162507 CTCTCAGCGCGAACAAAGTG 59.837 55.000 12.10 0.00 0.00 3.16
3838 6008 0.946221 CCTCTCAGCGCGAACAAAGT 60.946 55.000 12.10 0.00 0.00 2.66
3839 6009 0.667487 TCCTCTCAGCGCGAACAAAG 60.667 55.000 12.10 0.04 0.00 2.77
3840 6010 0.944311 GTCCTCTCAGCGCGAACAAA 60.944 55.000 12.10 0.00 0.00 2.83
3841 6011 1.372997 GTCCTCTCAGCGCGAACAA 60.373 57.895 12.10 0.00 0.00 2.83
3842 6012 2.258591 GTCCTCTCAGCGCGAACA 59.741 61.111 12.10 0.00 0.00 3.18
3843 6013 1.803519 CAGTCCTCTCAGCGCGAAC 60.804 63.158 12.10 0.00 0.00 3.95
3844 6014 1.971695 TCAGTCCTCTCAGCGCGAA 60.972 57.895 12.10 0.00 0.00 4.70
3845 6015 2.359975 TCAGTCCTCTCAGCGCGA 60.360 61.111 12.10 1.16 0.00 5.87
3846 6016 2.202544 GTCAGTCCTCTCAGCGCG 60.203 66.667 0.00 0.00 0.00 6.86
3847 6017 2.183046 GGTCAGTCCTCTCAGCGC 59.817 66.667 0.00 0.00 0.00 5.92
3848 6018 0.962855 TCAGGTCAGTCCTCTCAGCG 60.963 60.000 0.00 0.00 46.24 5.18
3849 6019 1.484038 ATCAGGTCAGTCCTCTCAGC 58.516 55.000 0.00 0.00 46.24 4.26
3850 6020 3.636300 CCTTATCAGGTCAGTCCTCTCAG 59.364 52.174 0.00 0.00 46.24 3.35
3851 6021 3.636679 CCTTATCAGGTCAGTCCTCTCA 58.363 50.000 0.00 0.00 46.24 3.27
3852 6022 2.364002 GCCTTATCAGGTCAGTCCTCTC 59.636 54.545 0.00 0.00 46.24 3.20
3853 6023 2.393646 GCCTTATCAGGTCAGTCCTCT 58.606 52.381 0.00 0.00 46.24 3.69
3854 6024 1.414550 GGCCTTATCAGGTCAGTCCTC 59.585 57.143 0.00 0.00 45.38 3.71
3855 6025 1.501582 GGCCTTATCAGGTCAGTCCT 58.498 55.000 0.00 0.00 45.38 3.85
3861 6031 3.282885 CCAAAGAAGGCCTTATCAGGTC 58.717 50.000 20.54 3.72 46.62 3.85
3862 6032 2.649816 ACCAAAGAAGGCCTTATCAGGT 59.350 45.455 23.52 23.52 43.18 4.00
3863 6033 3.372440 ACCAAAGAAGGCCTTATCAGG 57.628 47.619 20.54 21.77 44.28 3.86
3864 6034 4.766891 TCAAACCAAAGAAGGCCTTATCAG 59.233 41.667 20.54 11.31 34.00 2.90
3865 6035 4.735369 TCAAACCAAAGAAGGCCTTATCA 58.265 39.130 20.54 0.00 34.00 2.15
3866 6036 5.714047 CTTCAAACCAAAGAAGGCCTTATC 58.286 41.667 20.54 7.26 38.03 1.75
3867 6037 5.728637 CTTCAAACCAAAGAAGGCCTTAT 57.271 39.130 20.54 13.78 38.03 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.