Multiple sequence alignment - TraesCS6A01G263800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G263800 chr6A 100.000 7865 0 0 1 7865 486953154 486961018 0.000000e+00 14525.0
1 TraesCS6A01G263800 chr6A 85.926 540 59 7 1644 2172 181567391 181566858 1.920000e-155 560.0
2 TraesCS6A01G263800 chr6A 79.787 188 24 7 1643 1820 556656056 556656239 2.980000e-24 124.0
3 TraesCS6A01G263800 chr6A 98.361 61 0 1 6044 6104 486959142 486959201 1.080000e-18 106.0
4 TraesCS6A01G263800 chr6A 98.361 61 0 1 5989 6048 486959197 486959257 1.080000e-18 106.0
5 TraesCS6A01G263800 chr6A 84.337 83 11 2 7352 7433 391255482 391255401 6.540000e-11 80.5
6 TraesCS6A01G263800 chr6B 94.490 4991 147 49 2772 7692 523191919 523196851 0.000000e+00 7576.0
7 TraesCS6A01G263800 chr6B 90.364 1235 60 17 1404 2609 523190728 523191932 0.000000e+00 1567.0
8 TraesCS6A01G263800 chr6B 93.469 689 36 7 660 1346 523189797 523190478 0.000000e+00 1014.0
9 TraesCS6A01G263800 chr6B 87.137 241 24 5 379 615 523188955 523189192 4.680000e-67 267.0
10 TraesCS6A01G263800 chr6B 87.946 224 27 0 4930 5153 88825129 88825352 1.680000e-66 265.0
11 TraesCS6A01G263800 chr6B 85.490 255 23 8 211 452 701088136 701087883 3.640000e-63 254.0
12 TraesCS6A01G263800 chr6B 82.573 241 31 4 3600 3829 88823986 88824226 1.340000e-47 202.0
13 TraesCS6A01G263800 chr6B 78.859 298 49 9 2195 2487 648093165 648092877 1.040000e-43 189.0
14 TraesCS6A01G263800 chr6B 88.889 153 15 2 7714 7865 523197207 523197358 3.750000e-43 187.0
15 TraesCS6A01G263800 chr6B 95.946 74 3 0 377 450 27127273 27127200 3.850000e-23 121.0
16 TraesCS6A01G263800 chr6B 94.737 76 4 0 377 452 55007148 55007223 1.390000e-22 119.0
17 TraesCS6A01G263800 chr6B 95.082 61 2 1 5989 6048 523195168 523195228 2.340000e-15 95.3
18 TraesCS6A01G263800 chr6D 95.637 3621 115 22 4099 7694 354903222 354899620 0.000000e+00 5771.0
19 TraesCS6A01G263800 chr6D 93.175 1304 36 10 2780 4078 354904467 354903212 0.000000e+00 1866.0
20 TraesCS6A01G263800 chr6D 90.374 1257 58 21 1370 2609 354905670 354904460 0.000000e+00 1592.0
21 TraesCS6A01G263800 chr6D 93.343 721 31 5 636 1346 354906720 354906007 0.000000e+00 1050.0
22 TraesCS6A01G263800 chr6D 87.139 381 37 3 1645 2013 391929590 391929210 9.440000e-114 422.0
23 TraesCS6A01G263800 chr6D 92.086 139 5 1 2610 2748 131679868 131679736 2.900000e-44 191.0
24 TraesCS6A01G263800 chr6D 89.542 153 12 4 7713 7865 354899132 354898984 2.900000e-44 191.0
25 TraesCS6A01G263800 chr6D 84.277 159 21 3 2330 2487 121415779 121415624 1.370000e-32 152.0
26 TraesCS6A01G263800 chr6D 88.312 77 8 1 7357 7433 330111495 330111420 3.020000e-14 91.6
27 TraesCS6A01G263800 chr6D 96.364 55 2 0 5994 6048 354901265 354901211 3.020000e-14 91.6
28 TraesCS6A01G263800 chr6D 86.486 74 9 1 7356 7429 451854834 451854906 6.540000e-11 80.5
29 TraesCS6A01G263800 chr3A 87.284 1101 102 18 4102 5196 6781093 6782161 0.000000e+00 1223.0
30 TraesCS6A01G263800 chr3A 87.193 1101 103 18 4102 5196 6759493 6760561 0.000000e+00 1218.0
31 TraesCS6A01G263800 chr3A 87.012 1101 105 18 4102 5196 6704922 6705990 0.000000e+00 1206.0
32 TraesCS6A01G263800 chr3A 82.868 537 49 18 3600 4118 6758944 6759455 7.240000e-120 442.0
33 TraesCS6A01G263800 chr3A 82.682 537 50 18 3600 4118 6704372 6704883 3.370000e-118 436.0
34 TraesCS6A01G263800 chr3A 82.682 537 50 18 3600 4118 6780543 6781054 3.370000e-118 436.0
35 TraesCS6A01G263800 chr3A 89.595 173 16 2 208 378 436431715 436431887 1.330000e-52 219.0
36 TraesCS6A01G263800 chr3A 82.353 153 20 7 2328 2478 90180757 90180610 8.290000e-25 126.0
37 TraesCS6A01G263800 chr3A 92.857 42 3 0 102 143 432044685 432044726 2.370000e-05 62.1
38 TraesCS6A01G263800 chr3D 83.814 1075 113 34 3600 4654 439419768 439420801 0.000000e+00 965.0
39 TraesCS6A01G263800 chr3D 86.085 539 57 9 1644 2171 94496739 94497270 1.480000e-156 564.0
40 TraesCS6A01G263800 chr3D 91.250 80 7 0 7354 7433 477907356 477907435 8.340000e-20 110.0
41 TraesCS6A01G263800 chr3D 85.526 76 10 1 7357 7431 213681367 213681292 2.350000e-10 78.7
42 TraesCS6A01G263800 chr5B 86.765 680 67 14 3784 4452 425668260 425668927 0.000000e+00 736.0
43 TraesCS6A01G263800 chr5B 86.745 679 66 14 3784 4451 264912093 264911428 0.000000e+00 734.0
44 TraesCS6A01G263800 chr5B 86.252 531 63 7 1643 2170 259570090 259570613 1.150000e-157 568.0
45 TraesCS6A01G263800 chr5B 81.639 610 60 23 3606 4195 439442886 439443463 7.190000e-125 459.0
46 TraesCS6A01G263800 chr5B 80.827 532 52 20 4677 5196 439443777 439444270 9.640000e-99 372.0
47 TraesCS6A01G263800 chr1B 86.136 678 74 12 3784 4451 656526169 656525502 0.000000e+00 713.0
48 TraesCS6A01G263800 chr1B 89.881 168 14 3 211 376 601378806 601378640 6.180000e-51 213.0
49 TraesCS6A01G263800 chr1B 87.719 171 18 3 211 378 653870158 653869988 6.230000e-46 196.0
50 TraesCS6A01G263800 chr1B 90.278 144 4 3 2645 2785 230030549 230030413 6.270000e-41 180.0
51 TraesCS6A01G263800 chr1B 97.368 38 1 0 2289 2326 576282240 576282203 1.830000e-06 65.8
52 TraesCS6A01G263800 chr5A 90.476 483 33 5 1644 2126 487792703 487792234 6.700000e-175 625.0
53 TraesCS6A01G263800 chr5A 85.965 513 53 9 1674 2174 128197358 128196853 1.500000e-146 531.0
54 TraesCS6A01G263800 chr5A 86.640 494 49 6 1644 2126 306503170 306502683 1.500000e-146 531.0
55 TraesCS6A01G263800 chr5A 89.349 169 14 4 211 376 656731612 656731779 8.000000e-50 209.0
56 TraesCS6A01G263800 chr5A 88.000 175 17 4 208 378 644875137 644874963 3.720000e-48 204.0
57 TraesCS6A01G263800 chr5A 87.898 157 6 2 2607 2763 657542819 657542962 1.050000e-38 172.0
58 TraesCS6A01G263800 chr4B 86.322 541 57 6 1642 2171 232111265 232111799 2.460000e-159 573.0
59 TraesCS6A01G263800 chr4B 86.239 545 56 8 1638 2170 241350270 241350807 2.460000e-159 573.0
60 TraesCS6A01G263800 chr4B 90.909 77 7 0 7357 7433 41531501 41531425 3.880000e-18 104.0
61 TraesCS6A01G263800 chr4B 79.310 116 22 2 86 200 240734934 240734820 6.540000e-11 80.5
62 TraesCS6A01G263800 chr2A 85.766 555 58 11 1643 2183 681092946 681092399 1.150000e-157 568.0
63 TraesCS6A01G263800 chr2A 88.344 163 3 6 2609 2761 606829560 606829716 1.740000e-41 182.0
64 TraesCS6A01G263800 chr2A 82.955 88 14 1 106 192 733443967 733443880 2.350000e-10 78.7
65 TraesCS6A01G263800 chr5D 85.900 539 57 8 1644 2170 356694981 356694450 2.480000e-154 556.0
66 TraesCS6A01G263800 chr5D 79.115 565 54 25 4632 5185 120935671 120936182 1.640000e-86 331.0
67 TraesCS6A01G263800 chr5D 90.541 148 8 2 2635 2782 78798090 78797949 2.900000e-44 191.0
68 TraesCS6A01G263800 chr4A 85.064 549 61 10 1634 2170 531552055 531551516 2.500000e-149 540.0
69 TraesCS6A01G263800 chr4A 88.824 170 17 2 211 378 39082177 39082346 2.880000e-49 207.0
70 TraesCS6A01G263800 chr4A 76.899 316 55 13 2181 2489 677116936 677117240 6.310000e-36 163.0
71 TraesCS6A01G263800 chr4A 91.358 81 7 0 7353 7433 27643614 27643534 2.320000e-20 111.0
72 TraesCS6A01G263800 chr4A 80.952 126 20 2 2203 2325 457822179 457822303 6.500000e-16 97.1
73 TraesCS6A01G263800 chr7B 81.475 610 61 23 3606 4195 98985904 98986481 3.350000e-123 453.0
74 TraesCS6A01G263800 chr7B 79.887 532 57 20 4677 5196 98986797 98987290 2.100000e-90 344.0
75 TraesCS6A01G263800 chr7B 88.525 122 11 1 2204 2322 138654296 138654417 2.290000e-30 145.0
76 TraesCS6A01G263800 chr7B 87.234 94 11 1 377 470 23717388 23717296 1.080000e-18 106.0
77 TraesCS6A01G263800 chr7B 80.000 130 24 2 2197 2325 203741539 203741667 2.340000e-15 95.3
78 TraesCS6A01G263800 chr7B 79.310 116 21 3 86 200 263799268 263799155 2.350000e-10 78.7
79 TraesCS6A01G263800 chr7B 78.632 117 23 2 86 201 91323415 91323530 8.460000e-10 76.8
80 TraesCS6A01G263800 chr7D 80.736 571 57 23 4632 5191 77498971 77498443 5.720000e-106 396.0
81 TraesCS6A01G263800 chr7D 80.531 565 57 23 4632 5185 147586123 147586645 1.240000e-102 385.0
82 TraesCS6A01G263800 chr7D 88.889 171 17 2 208 377 474264521 474264690 8.000000e-50 209.0
83 TraesCS6A01G263800 chr7D 88.235 170 18 2 211 378 167533124 167533293 1.340000e-47 202.0
84 TraesCS6A01G263800 chr7D 88.095 168 19 1 212 378 634258794 634258961 1.730000e-46 198.0
85 TraesCS6A01G263800 chr7D 91.429 70 5 1 7364 7433 66954735 66954803 2.340000e-15 95.3
86 TraesCS6A01G263800 chr7D 87.654 81 7 2 7356 7433 59711290 59711370 3.020000e-14 91.6
87 TraesCS6A01G263800 chr3B 91.447 152 7 2 2610 2761 29375476 29375331 3.720000e-48 204.0
88 TraesCS6A01G263800 chr3B 78.351 291 48 10 2204 2489 612802933 612802653 2.920000e-39 174.0
89 TraesCS6A01G263800 chr3B 91.250 80 7 0 7354 7433 637089694 637089773 8.340000e-20 110.0
90 TraesCS6A01G263800 chr3B 97.297 37 1 0 2290 2326 81674786 81674750 6.590000e-06 63.9
91 TraesCS6A01G263800 chr7A 88.439 173 11 3 2610 2779 44439638 44439472 4.810000e-47 200.0
92 TraesCS6A01G263800 chr7A 89.744 78 7 1 7356 7433 505687216 505687292 1.810000e-16 99.0
93 TraesCS6A01G263800 chr2B 79.000 300 49 9 2193 2487 439218491 439218781 8.050000e-45 193.0
94 TraesCS6A01G263800 chr1A 92.199 141 4 3 2645 2785 209359286 209359419 8.050000e-45 193.0
95 TraesCS6A01G263800 chr1A 90.588 85 5 2 7352 7433 350017090 350017174 8.340000e-20 110.0
96 TraesCS6A01G263800 chr1A 89.189 74 8 0 7357 7430 154576781 154576854 8.400000e-15 93.5
97 TraesCS6A01G263800 chr1A 97.297 37 1 0 2290 2326 506702627 506702591 6.590000e-06 63.9
98 TraesCS6A01G263800 chr2D 92.537 134 4 1 2646 2779 220355096 220354969 3.750000e-43 187.0
99 TraesCS6A01G263800 chr2D 87.597 129 12 2 322 450 5897318 5897194 6.360000e-31 147.0
100 TraesCS6A01G263800 chr2D 88.095 84 8 2 7352 7433 86080906 86080989 1.810000e-16 99.0
101 TraesCS6A01G263800 chrUn 91.473 129 5 4 2633 2761 75469239 75469361 1.050000e-38 172.0
102 TraesCS6A01G263800 chr4D 85.625 160 18 5 2328 2485 311159982 311160138 6.310000e-36 163.0
103 TraesCS6A01G263800 chr4D 96.053 76 3 0 377 452 226455268 226455343 2.980000e-24 124.0
104 TraesCS6A01G263800 chr4D 96.000 75 3 0 376 450 473138716 473138642 1.070000e-23 122.0
105 TraesCS6A01G263800 chr4D 94.737 76 4 0 377 452 226385176 226385251 1.390000e-22 119.0
106 TraesCS6A01G263800 chr4D 86.747 83 8 3 2246 2325 117658452 117658370 1.090000e-13 89.8
107 TraesCS6A01G263800 chr4D 86.441 59 6 2 7346 7402 82830169 82830111 6.590000e-06 63.9
108 TraesCS6A01G263800 chr1D 90.588 85 5 2 7352 7433 277362514 277362598 8.340000e-20 110.0
109 TraesCS6A01G263800 chr1D 89.189 74 8 0 7357 7430 138347207 138347280 8.400000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G263800 chr6A 486953154 486961018 7864 False 4912.333333 14525 98.907333 1 7865 3 chr6A.!!$F2 7864
1 TraesCS6A01G263800 chr6A 181566858 181567391 533 True 560.000000 560 85.926000 1644 2172 1 chr6A.!!$R1 528
2 TraesCS6A01G263800 chr6B 523188955 523197358 8403 False 1784.383333 7576 91.571833 379 7865 6 chr6B.!!$F3 7486
3 TraesCS6A01G263800 chr6B 88823986 88825352 1366 False 233.500000 265 85.259500 3600 5153 2 chr6B.!!$F2 1553
4 TraesCS6A01G263800 chr6D 354898984 354906720 7736 True 1760.266667 5771 93.072500 636 7865 6 chr6D.!!$R5 7229
5 TraesCS6A01G263800 chr3A 6758944 6760561 1617 False 830.000000 1218 85.030500 3600 5196 2 chr3A.!!$F4 1596
6 TraesCS6A01G263800 chr3A 6780543 6782161 1618 False 829.500000 1223 84.983000 3600 5196 2 chr3A.!!$F5 1596
7 TraesCS6A01G263800 chr3A 6704372 6705990 1618 False 821.000000 1206 84.847000 3600 5196 2 chr3A.!!$F3 1596
8 TraesCS6A01G263800 chr3D 439419768 439420801 1033 False 965.000000 965 83.814000 3600 4654 1 chr3D.!!$F2 1054
9 TraesCS6A01G263800 chr3D 94496739 94497270 531 False 564.000000 564 86.085000 1644 2171 1 chr3D.!!$F1 527
10 TraesCS6A01G263800 chr5B 425668260 425668927 667 False 736.000000 736 86.765000 3784 4452 1 chr5B.!!$F2 668
11 TraesCS6A01G263800 chr5B 264911428 264912093 665 True 734.000000 734 86.745000 3784 4451 1 chr5B.!!$R1 667
12 TraesCS6A01G263800 chr5B 259570090 259570613 523 False 568.000000 568 86.252000 1643 2170 1 chr5B.!!$F1 527
13 TraesCS6A01G263800 chr5B 439442886 439444270 1384 False 415.500000 459 81.233000 3606 5196 2 chr5B.!!$F3 1590
14 TraesCS6A01G263800 chr1B 656525502 656526169 667 True 713.000000 713 86.136000 3784 4451 1 chr1B.!!$R5 667
15 TraesCS6A01G263800 chr5A 128196853 128197358 505 True 531.000000 531 85.965000 1674 2174 1 chr5A.!!$R1 500
16 TraesCS6A01G263800 chr4B 232111265 232111799 534 False 573.000000 573 86.322000 1642 2171 1 chr4B.!!$F1 529
17 TraesCS6A01G263800 chr4B 241350270 241350807 537 False 573.000000 573 86.239000 1638 2170 1 chr4B.!!$F2 532
18 TraesCS6A01G263800 chr2A 681092399 681092946 547 True 568.000000 568 85.766000 1643 2183 1 chr2A.!!$R1 540
19 TraesCS6A01G263800 chr5D 356694450 356694981 531 True 556.000000 556 85.900000 1644 2170 1 chr5D.!!$R2 526
20 TraesCS6A01G263800 chr5D 120935671 120936182 511 False 331.000000 331 79.115000 4632 5185 1 chr5D.!!$F1 553
21 TraesCS6A01G263800 chr4A 531551516 531552055 539 True 540.000000 540 85.064000 1634 2170 1 chr4A.!!$R2 536
22 TraesCS6A01G263800 chr7B 98985904 98987290 1386 False 398.500000 453 80.681000 3606 5196 2 chr7B.!!$F4 1590
23 TraesCS6A01G263800 chr7D 77498443 77498971 528 True 396.000000 396 80.736000 4632 5191 1 chr7D.!!$R1 559
24 TraesCS6A01G263800 chr7D 147586123 147586645 522 False 385.000000 385 80.531000 4632 5185 1 chr7D.!!$F3 553


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
460 461 0.041090 GGTTGGTTCACCCCATCCAT 59.959 55.000 0.00 0.00 41.94 3.41 F
1408 2489 0.461693 GATGAGTGAGGCACTGAGGC 60.462 60.000 4.60 0.00 45.44 4.70 F
2624 3748 0.165944 GTGCCATGGTTTTCGAGTCG 59.834 55.000 14.67 6.09 0.00 4.18 F
2664 3788 0.037046 GGGGTAGCGACTCGGAAAAA 60.037 55.000 0.00 0.00 0.00 1.94 F
2678 3802 0.110010 GAAAAAGTCGAGCCTGCAGC 60.110 55.000 8.66 3.91 44.25 5.25 F
2695 3819 0.389166 AGCTGCAGTTGCGACTAGTC 60.389 55.000 16.64 13.18 45.83 2.59 F
2781 3905 0.531974 GCGGCTCGAAATCCATGGTA 60.532 55.000 12.58 0.00 0.00 3.25 F
3965 5131 0.827507 TTTCCTGAGGGCCTGTTTGC 60.828 55.000 12.95 0.00 0.00 3.68 F
4693 5962 1.475930 GGGAGGCTTCAGCTGTATTCC 60.476 57.143 14.67 13.83 41.70 3.01 F
6343 8256 0.533755 GGCCACCGATTCAGATGGAG 60.534 60.000 0.00 0.00 33.80 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1665 2764 0.321298 GGCCTTCCGCTTGACTTACA 60.321 55.000 0.00 0.00 37.74 2.41 R
2645 3769 0.037046 TTTTTCCGAGTCGCTACCCC 60.037 55.000 7.12 0.00 0.00 4.95 R
4282 5532 1.067295 ATGGTGGGAACTGAAGCAGA 58.933 50.000 0.82 0.00 35.18 4.26 R
4315 5566 3.825585 TGCCAGAGTCAATATTGCAAACA 59.174 39.130 10.76 0.00 0.00 2.83 R
4669 5938 1.142748 CAGCTGAAGCCTCCCTACG 59.857 63.158 8.42 0.00 43.38 3.51 R
4771 6041 7.862741 ATGAGATGCATTTAAAATGTATGCG 57.137 32.000 0.00 0.00 45.80 4.73 R
4839 6110 1.143813 CTGAGGGAAGTATGGGCCAT 58.856 55.000 24.69 24.69 0.00 4.40 R
5028 6940 0.666577 GACACCGGAAACCTCAGACG 60.667 60.000 9.46 0.00 0.00 4.18 R
6615 8529 0.106268 TGCAGGAAGCCAGGAAACAA 60.106 50.000 0.00 0.00 44.83 2.83 R
7167 9090 0.387239 GCAAGCGATTTGACACCCAC 60.387 55.000 4.50 0.00 39.21 4.61 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.357018 GGTTTCGTCATTCCAAGGAATC 57.643 45.455 11.31 1.43 42.30 2.52
22 23 3.756434 GGTTTCGTCATTCCAAGGAATCA 59.244 43.478 11.31 0.00 42.30 2.57
23 24 4.379499 GGTTTCGTCATTCCAAGGAATCAC 60.379 45.833 11.31 8.48 42.30 3.06
24 25 3.694043 TCGTCATTCCAAGGAATCACA 57.306 42.857 14.82 1.45 42.30 3.58
25 26 4.220693 TCGTCATTCCAAGGAATCACAT 57.779 40.909 14.82 0.00 42.30 3.21
26 27 5.351948 TCGTCATTCCAAGGAATCACATA 57.648 39.130 14.82 1.19 42.30 2.29
27 28 5.359756 TCGTCATTCCAAGGAATCACATAG 58.640 41.667 14.82 3.18 42.30 2.23
28 29 5.128663 TCGTCATTCCAAGGAATCACATAGA 59.871 40.000 14.82 5.24 42.30 1.98
29 30 5.817296 CGTCATTCCAAGGAATCACATAGAA 59.183 40.000 14.82 0.00 42.30 2.10
30 31 6.238211 CGTCATTCCAAGGAATCACATAGAAC 60.238 42.308 14.82 3.28 42.30 3.01
31 32 6.599244 GTCATTCCAAGGAATCACATAGAACA 59.401 38.462 11.31 0.00 42.30 3.18
32 33 7.284034 GTCATTCCAAGGAATCACATAGAACAT 59.716 37.037 11.31 0.00 42.30 2.71
33 34 8.493607 TCATTCCAAGGAATCACATAGAACATA 58.506 33.333 11.31 0.00 42.30 2.29
34 35 9.293404 CATTCCAAGGAATCACATAGAACATAT 57.707 33.333 11.31 0.00 42.30 1.78
35 36 8.681486 TTCCAAGGAATCACATAGAACATATG 57.319 34.615 0.00 0.00 0.00 1.78
36 37 7.226441 TCCAAGGAATCACATAGAACATATGG 58.774 38.462 7.80 0.00 0.00 2.74
37 38 6.432162 CCAAGGAATCACATAGAACATATGGG 59.568 42.308 7.80 0.00 0.00 4.00
38 39 6.131972 AGGAATCACATAGAACATATGGGG 57.868 41.667 7.80 0.00 0.00 4.96
39 40 5.851693 AGGAATCACATAGAACATATGGGGA 59.148 40.000 7.80 0.00 0.00 4.81
40 41 6.013032 AGGAATCACATAGAACATATGGGGAG 60.013 42.308 7.80 0.00 0.00 4.30
41 42 6.240002 GGAATCACATAGAACATATGGGGAGT 60.240 42.308 7.80 0.00 0.00 3.85
42 43 5.551305 TCACATAGAACATATGGGGAGTG 57.449 43.478 7.80 8.04 0.00 3.51
43 44 4.347876 TCACATAGAACATATGGGGAGTGG 59.652 45.833 7.80 0.00 0.00 4.00
44 45 3.073062 ACATAGAACATATGGGGAGTGGC 59.927 47.826 7.80 0.00 0.00 5.01
45 46 0.469917 AGAACATATGGGGAGTGGCG 59.530 55.000 7.80 0.00 0.00 5.69
46 47 0.535102 GAACATATGGGGAGTGGCGG 60.535 60.000 7.80 0.00 0.00 6.13
47 48 1.994885 AACATATGGGGAGTGGCGGG 61.995 60.000 7.80 0.00 0.00 6.13
48 49 3.570212 ATATGGGGAGTGGCGGGC 61.570 66.667 0.00 0.00 0.00 6.13
49 50 4.815973 TATGGGGAGTGGCGGGCT 62.816 66.667 2.38 0.00 0.00 5.19
80 81 1.204146 CCATGTGGGCTACTGTAGGT 58.796 55.000 16.09 0.00 0.00 3.08
81 82 1.559682 CCATGTGGGCTACTGTAGGTT 59.440 52.381 16.09 0.00 0.00 3.50
82 83 2.026262 CCATGTGGGCTACTGTAGGTTT 60.026 50.000 16.09 0.00 0.00 3.27
83 84 3.270877 CATGTGGGCTACTGTAGGTTTC 58.729 50.000 16.09 0.00 0.00 2.78
84 85 1.274167 TGTGGGCTACTGTAGGTTTCG 59.726 52.381 16.09 0.00 0.00 3.46
85 86 0.899720 TGGGCTACTGTAGGTTTCGG 59.100 55.000 16.09 0.00 0.00 4.30
86 87 0.177373 GGGCTACTGTAGGTTTCGGG 59.823 60.000 16.09 0.00 0.00 5.14
87 88 0.177373 GGCTACTGTAGGTTTCGGGG 59.823 60.000 16.09 0.00 0.00 5.73
88 89 1.188863 GCTACTGTAGGTTTCGGGGA 58.811 55.000 16.09 0.00 0.00 4.81
89 90 1.136500 GCTACTGTAGGTTTCGGGGAG 59.864 57.143 16.09 0.00 0.00 4.30
90 91 1.755380 CTACTGTAGGTTTCGGGGAGG 59.245 57.143 6.95 0.00 0.00 4.30
91 92 0.908180 ACTGTAGGTTTCGGGGAGGG 60.908 60.000 0.00 0.00 0.00 4.30
92 93 2.253403 CTGTAGGTTTCGGGGAGGGC 62.253 65.000 0.00 0.00 0.00 5.19
93 94 2.689771 TAGGTTTCGGGGAGGGCC 60.690 66.667 0.00 0.00 0.00 5.80
94 95 3.566016 TAGGTTTCGGGGAGGGCCA 62.566 63.158 6.18 0.00 35.15 5.36
95 96 4.735358 GGTTTCGGGGAGGGCCAC 62.735 72.222 6.18 0.00 35.15 5.01
107 108 4.171103 GGCCACGCGGGGTTAGAT 62.171 66.667 31.19 0.00 37.04 1.98
108 109 2.895372 GCCACGCGGGGTTAGATG 60.895 66.667 31.19 5.58 37.04 2.90
109 110 2.582436 CCACGCGGGGTTAGATGT 59.418 61.111 22.33 0.00 0.00 3.06
110 111 1.078708 CCACGCGGGGTTAGATGTT 60.079 57.895 22.33 0.00 0.00 2.71
111 112 1.366111 CCACGCGGGGTTAGATGTTG 61.366 60.000 22.33 0.00 0.00 3.33
112 113 0.390603 CACGCGGGGTTAGATGTTGA 60.391 55.000 12.47 0.00 0.00 3.18
113 114 0.390735 ACGCGGGGTTAGATGTTGAC 60.391 55.000 12.47 0.00 0.00 3.18
114 115 1.087771 CGCGGGGTTAGATGTTGACC 61.088 60.000 0.00 0.00 0.00 4.02
118 119 2.124277 GGGTTAGATGTTGACCCCAC 57.876 55.000 0.00 0.00 45.94 4.61
119 120 1.353022 GGGTTAGATGTTGACCCCACA 59.647 52.381 0.00 0.00 45.94 4.17
120 121 2.025321 GGGTTAGATGTTGACCCCACAT 60.025 50.000 0.00 0.00 45.94 3.21
121 122 3.016736 GGTTAGATGTTGACCCCACATG 58.983 50.000 0.00 0.00 0.00 3.21
122 123 3.561313 GGTTAGATGTTGACCCCACATGT 60.561 47.826 0.00 0.00 0.00 3.21
123 124 2.496899 AGATGTTGACCCCACATGTC 57.503 50.000 0.00 0.00 0.00 3.06
124 125 1.704628 AGATGTTGACCCCACATGTCA 59.295 47.619 0.00 0.00 40.80 3.58
125 126 2.309755 AGATGTTGACCCCACATGTCAT 59.690 45.455 0.00 0.00 41.99 3.06
126 127 3.523157 AGATGTTGACCCCACATGTCATA 59.477 43.478 0.00 0.00 41.99 2.15
127 128 3.797559 TGTTGACCCCACATGTCATAA 57.202 42.857 0.00 0.00 41.99 1.90
128 129 3.684908 TGTTGACCCCACATGTCATAAG 58.315 45.455 0.00 0.00 41.99 1.73
129 130 3.329225 TGTTGACCCCACATGTCATAAGA 59.671 43.478 0.00 0.00 41.99 2.10
130 131 3.912496 TGACCCCACATGTCATAAGAG 57.088 47.619 0.00 0.00 37.80 2.85
131 132 3.181329 TGACCCCACATGTCATAAGAGT 58.819 45.455 0.00 0.00 37.80 3.24
132 133 3.587061 TGACCCCACATGTCATAAGAGTT 59.413 43.478 0.00 0.00 37.80 3.01
133 134 4.780554 TGACCCCACATGTCATAAGAGTTA 59.219 41.667 0.00 0.00 37.80 2.24
134 135 5.428457 TGACCCCACATGTCATAAGAGTTAT 59.572 40.000 0.00 0.00 37.80 1.89
135 136 6.069673 TGACCCCACATGTCATAAGAGTTATT 60.070 38.462 0.00 0.00 37.80 1.40
136 137 6.731467 ACCCCACATGTCATAAGAGTTATTT 58.269 36.000 0.00 0.00 0.00 1.40
137 138 7.182060 ACCCCACATGTCATAAGAGTTATTTT 58.818 34.615 0.00 0.00 0.00 1.82
138 139 7.673926 ACCCCACATGTCATAAGAGTTATTTTT 59.326 33.333 0.00 0.00 0.00 1.94
139 140 9.184523 CCCCACATGTCATAAGAGTTATTTTTA 57.815 33.333 0.00 0.00 0.00 1.52
205 206 7.961326 ATAAATTCATAAGCATACCCCATCC 57.039 36.000 0.00 0.00 0.00 3.51
206 207 5.337956 AATTCATAAGCATACCCCATCCA 57.662 39.130 0.00 0.00 0.00 3.41
207 208 5.541258 ATTCATAAGCATACCCCATCCAT 57.459 39.130 0.00 0.00 0.00 3.41
208 209 6.656965 ATTCATAAGCATACCCCATCCATA 57.343 37.500 0.00 0.00 0.00 2.74
209 210 5.698741 TCATAAGCATACCCCATCCATAG 57.301 43.478 0.00 0.00 0.00 2.23
210 211 5.100811 TCATAAGCATACCCCATCCATAGT 58.899 41.667 0.00 0.00 0.00 2.12
211 212 5.551583 TCATAAGCATACCCCATCCATAGTT 59.448 40.000 0.00 0.00 0.00 2.24
212 213 4.814224 AAGCATACCCCATCCATAGTTT 57.186 40.909 0.00 0.00 0.00 2.66
213 214 4.814224 AGCATACCCCATCCATAGTTTT 57.186 40.909 0.00 0.00 0.00 2.43
214 215 5.142806 AGCATACCCCATCCATAGTTTTT 57.857 39.130 0.00 0.00 0.00 1.94
232 233 3.408288 TTTTTAACACGGCACAGACAC 57.592 42.857 0.00 0.00 0.00 3.67
233 234 2.025589 TTTAACACGGCACAGACACA 57.974 45.000 0.00 0.00 0.00 3.72
234 235 2.025589 TTAACACGGCACAGACACAA 57.974 45.000 0.00 0.00 0.00 3.33
235 236 1.577468 TAACACGGCACAGACACAAG 58.423 50.000 0.00 0.00 0.00 3.16
236 237 1.714899 AACACGGCACAGACACAAGC 61.715 55.000 0.00 0.00 0.00 4.01
237 238 2.967076 ACGGCACAGACACAAGCG 60.967 61.111 0.00 0.00 0.00 4.68
238 239 4.374702 CGGCACAGACACAAGCGC 62.375 66.667 0.00 0.00 0.00 5.92
239 240 2.974698 GGCACAGACACAAGCGCT 60.975 61.111 2.64 2.64 0.00 5.92
240 241 2.553268 GCACAGACACAAGCGCTC 59.447 61.111 12.06 0.00 0.00 5.03
241 242 2.246739 GCACAGACACAAGCGCTCA 61.247 57.895 12.06 0.00 0.00 4.26
242 243 1.572085 GCACAGACACAAGCGCTCAT 61.572 55.000 12.06 0.00 0.00 2.90
243 244 1.713597 CACAGACACAAGCGCTCATA 58.286 50.000 12.06 0.00 0.00 2.15
244 245 1.391485 CACAGACACAAGCGCTCATAC 59.609 52.381 12.06 1.58 0.00 2.39
245 246 1.000843 ACAGACACAAGCGCTCATACA 59.999 47.619 12.06 0.00 0.00 2.29
246 247 2.274437 CAGACACAAGCGCTCATACAT 58.726 47.619 12.06 0.00 0.00 2.29
247 248 3.119137 ACAGACACAAGCGCTCATACATA 60.119 43.478 12.06 0.00 0.00 2.29
248 249 3.243877 CAGACACAAGCGCTCATACATAC 59.756 47.826 12.06 0.00 0.00 2.39
249 250 2.193447 ACACAAGCGCTCATACATACG 58.807 47.619 12.06 0.00 0.00 3.06
253 254 3.916439 CGCTCATACATACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
254 255 2.434688 CGCTCATACATACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
255 256 1.613270 CGCTCATACATACGCGCATA 58.387 50.000 5.73 0.00 39.11 3.14
256 257 1.317611 CGCTCATACATACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
257 258 2.324860 GCTCATACATACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
258 259 2.090658 GCTCATACATACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
259 260 2.312348 TCATACATACGCGCATACACG 58.688 47.619 5.73 0.00 0.00 4.49
270 271 2.933769 CGCATACACGCATCTCTATGA 58.066 47.619 0.00 0.00 34.84 2.15
271 272 3.308530 CGCATACACGCATCTCTATGAA 58.691 45.455 0.00 0.00 34.84 2.57
272 273 3.120286 CGCATACACGCATCTCTATGAAC 59.880 47.826 0.00 0.00 34.84 3.18
273 274 4.051237 GCATACACGCATCTCTATGAACA 58.949 43.478 0.00 0.00 34.84 3.18
274 275 4.084849 GCATACACGCATCTCTATGAACAC 60.085 45.833 0.00 0.00 34.84 3.32
275 276 3.592898 ACACGCATCTCTATGAACACA 57.407 42.857 0.00 0.00 34.84 3.72
276 277 3.925379 ACACGCATCTCTATGAACACAA 58.075 40.909 0.00 0.00 34.84 3.33
277 278 3.679980 ACACGCATCTCTATGAACACAAC 59.320 43.478 0.00 0.00 34.84 3.32
278 279 3.679502 CACGCATCTCTATGAACACAACA 59.320 43.478 0.00 0.00 34.84 3.33
279 280 3.679980 ACGCATCTCTATGAACACAACAC 59.320 43.478 0.00 0.00 34.84 3.32
280 281 3.241773 CGCATCTCTATGAACACAACACG 60.242 47.826 0.00 0.00 34.84 4.49
281 282 3.484229 GCATCTCTATGAACACAACACGC 60.484 47.826 0.00 0.00 34.84 5.34
282 283 3.378911 TCTCTATGAACACAACACGCA 57.621 42.857 0.00 0.00 0.00 5.24
283 284 3.057019 TCTCTATGAACACAACACGCAC 58.943 45.455 0.00 0.00 0.00 5.34
284 285 2.799978 CTCTATGAACACAACACGCACA 59.200 45.455 0.00 0.00 0.00 4.57
285 286 2.542178 TCTATGAACACAACACGCACAC 59.458 45.455 0.00 0.00 0.00 3.82
286 287 0.380378 ATGAACACAACACGCACACC 59.620 50.000 0.00 0.00 0.00 4.16
287 288 1.063488 GAACACAACACGCACACCC 59.937 57.895 0.00 0.00 0.00 4.61
288 289 1.373590 GAACACAACACGCACACCCT 61.374 55.000 0.00 0.00 0.00 4.34
289 290 0.107606 AACACAACACGCACACCCTA 60.108 50.000 0.00 0.00 0.00 3.53
290 291 0.812412 ACACAACACGCACACCCTAC 60.812 55.000 0.00 0.00 0.00 3.18
291 292 1.227734 ACAACACGCACACCCTACC 60.228 57.895 0.00 0.00 0.00 3.18
292 293 1.964373 CAACACGCACACCCTACCC 60.964 63.158 0.00 0.00 0.00 3.69
293 294 3.186656 AACACGCACACCCTACCCC 62.187 63.158 0.00 0.00 0.00 4.95
294 295 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
295 296 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
296 297 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
297 298 0.262580 ACGCACACCCTACCCCTATA 59.737 55.000 0.00 0.00 0.00 1.31
298 299 1.343277 ACGCACACCCTACCCCTATAA 60.343 52.381 0.00 0.00 0.00 0.98
299 300 1.343465 CGCACACCCTACCCCTATAAG 59.657 57.143 0.00 0.00 0.00 1.73
300 301 1.071857 GCACACCCTACCCCTATAAGC 59.928 57.143 0.00 0.00 0.00 3.09
301 302 2.404559 CACACCCTACCCCTATAAGCA 58.595 52.381 0.00 0.00 0.00 3.91
302 303 2.368875 CACACCCTACCCCTATAAGCAG 59.631 54.545 0.00 0.00 0.00 4.24
303 304 2.022330 ACACCCTACCCCTATAAGCAGT 60.022 50.000 0.00 0.00 0.00 4.40
304 305 3.046374 CACCCTACCCCTATAAGCAGTT 58.954 50.000 0.00 0.00 0.00 3.16
305 306 3.458487 CACCCTACCCCTATAAGCAGTTT 59.542 47.826 0.00 0.00 0.00 2.66
306 307 3.715315 ACCCTACCCCTATAAGCAGTTTC 59.285 47.826 0.00 0.00 0.00 2.78
307 308 3.244112 CCCTACCCCTATAAGCAGTTTCG 60.244 52.174 0.00 0.00 0.00 3.46
308 309 3.640029 CCTACCCCTATAAGCAGTTTCGA 59.360 47.826 0.00 0.00 0.00 3.71
309 310 3.821421 ACCCCTATAAGCAGTTTCGAG 57.179 47.619 0.00 0.00 0.00 4.04
310 311 3.371965 ACCCCTATAAGCAGTTTCGAGA 58.628 45.455 0.00 0.00 0.00 4.04
311 312 3.385111 ACCCCTATAAGCAGTTTCGAGAG 59.615 47.826 0.00 0.00 0.00 3.20
312 313 3.637229 CCCCTATAAGCAGTTTCGAGAGA 59.363 47.826 0.00 0.00 39.20 3.10
313 314 4.500035 CCCCTATAAGCAGTTTCGAGAGAC 60.500 50.000 0.00 0.00 41.84 3.36
314 315 4.339814 CCCTATAAGCAGTTTCGAGAGACT 59.660 45.833 0.00 0.00 41.84 3.24
315 316 5.277825 CCTATAAGCAGTTTCGAGAGACTG 58.722 45.833 16.51 16.51 44.67 3.51
316 317 5.066634 CCTATAAGCAGTTTCGAGAGACTGA 59.933 44.000 22.71 6.95 44.65 3.41
317 318 3.296322 AAGCAGTTTCGAGAGACTGAG 57.704 47.619 22.71 3.13 44.65 3.35
318 319 1.067915 AGCAGTTTCGAGAGACTGAGC 60.068 52.381 22.71 11.46 44.65 4.26
319 320 1.067915 GCAGTTTCGAGAGACTGAGCT 60.068 52.381 22.71 0.00 44.65 4.09
320 321 2.594321 CAGTTTCGAGAGACTGAGCTG 58.406 52.381 15.99 1.09 44.65 4.24
321 322 2.227626 CAGTTTCGAGAGACTGAGCTGA 59.772 50.000 15.99 0.00 44.65 4.26
322 323 2.227865 AGTTTCGAGAGACTGAGCTGAC 59.772 50.000 0.00 0.00 41.84 3.51
323 324 1.897560 TTCGAGAGACTGAGCTGACA 58.102 50.000 0.00 0.00 41.84 3.58
324 325 2.121291 TCGAGAGACTGAGCTGACAT 57.879 50.000 0.00 0.00 33.31 3.06
325 326 3.268023 TCGAGAGACTGAGCTGACATA 57.732 47.619 0.00 0.00 33.31 2.29
326 327 3.814625 TCGAGAGACTGAGCTGACATAT 58.185 45.455 0.00 0.00 33.31 1.78
327 328 3.812609 TCGAGAGACTGAGCTGACATATC 59.187 47.826 0.00 0.00 33.31 1.63
328 329 3.563390 CGAGAGACTGAGCTGACATATCA 59.437 47.826 0.00 0.00 0.00 2.15
329 330 4.216042 CGAGAGACTGAGCTGACATATCAT 59.784 45.833 0.00 0.00 33.22 2.45
330 331 5.278414 CGAGAGACTGAGCTGACATATCATT 60.278 44.000 0.00 0.00 33.22 2.57
331 332 6.482898 AGAGACTGAGCTGACATATCATTT 57.517 37.500 0.00 0.00 33.22 2.32
332 333 6.887013 AGAGACTGAGCTGACATATCATTTT 58.113 36.000 0.00 0.00 33.22 1.82
333 334 6.762187 AGAGACTGAGCTGACATATCATTTTG 59.238 38.462 0.00 0.00 33.22 2.44
334 335 6.647229 AGACTGAGCTGACATATCATTTTGA 58.353 36.000 0.00 0.00 33.22 2.69
335 336 6.762187 AGACTGAGCTGACATATCATTTTGAG 59.238 38.462 0.00 0.00 33.22 3.02
336 337 6.647229 ACTGAGCTGACATATCATTTTGAGA 58.353 36.000 0.00 0.00 33.22 3.27
337 338 7.281098 ACTGAGCTGACATATCATTTTGAGAT 58.719 34.615 0.00 0.00 33.22 2.75
338 339 7.774157 ACTGAGCTGACATATCATTTTGAGATT 59.226 33.333 0.00 0.00 33.22 2.40
339 340 8.515695 TGAGCTGACATATCATTTTGAGATTT 57.484 30.769 0.00 0.00 33.22 2.17
340 341 9.617523 TGAGCTGACATATCATTTTGAGATTTA 57.382 29.630 0.00 0.00 33.22 1.40
341 342 9.875675 GAGCTGACATATCATTTTGAGATTTAC 57.124 33.333 0.00 0.00 33.22 2.01
342 343 8.554528 AGCTGACATATCATTTTGAGATTTACG 58.445 33.333 0.00 0.00 33.22 3.18
343 344 8.551205 GCTGACATATCATTTTGAGATTTACGA 58.449 33.333 0.00 0.00 33.22 3.43
350 351 7.129109 TCATTTTGAGATTTACGAAGTCACC 57.871 36.000 0.00 0.00 43.93 4.02
351 352 5.585500 TTTTGAGATTTACGAAGTCACCG 57.415 39.130 0.00 0.00 43.93 4.94
352 353 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
353 354 5.375417 TTGAGATTTACGAAGTCACCGTA 57.625 39.130 0.00 0.00 43.93 4.02
354 355 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
366 367 3.494336 CCGTAGGCGTCTCGTCGT 61.494 66.667 0.00 0.00 46.14 4.34
367 368 2.021106 CGTAGGCGTCTCGTCGTC 59.979 66.667 0.00 0.00 36.23 4.20
368 369 2.021106 GTAGGCGTCTCGTCGTCG 59.979 66.667 0.00 0.00 40.52 5.12
369 370 2.125952 TAGGCGTCTCGTCGTCGA 60.126 61.111 4.42 4.42 44.12 4.20
370 371 2.447887 TAGGCGTCTCGTCGTCGAC 61.448 63.158 15.51 15.51 41.35 4.20
397 398 1.143073 GAACACCAGGACTTGAACCCT 59.857 52.381 0.00 0.00 0.00 4.34
442 443 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
453 454 4.174305 CCACAGGTTGGTTCACCC 57.826 61.111 0.00 0.00 41.10 4.61
456 457 0.178964 CACAGGTTGGTTCACCCCAT 60.179 55.000 0.00 0.00 37.58 4.00
458 459 0.611896 CAGGTTGGTTCACCCCATCC 60.612 60.000 0.00 0.00 42.45 3.51
459 460 1.071314 AGGTTGGTTCACCCCATCCA 61.071 55.000 9.37 0.00 43.91 3.41
460 461 0.041090 GGTTGGTTCACCCCATCCAT 59.959 55.000 0.00 0.00 41.94 3.41
468 473 2.109774 TCACCCCATCCATGATTTTGC 58.890 47.619 0.00 0.00 0.00 3.68
512 517 5.221561 CGATGTTTATGGGTAGGGTACATGA 60.222 44.000 0.00 0.00 0.00 3.07
518 523 3.533146 TGGGTAGGGTACATGAGGAAAA 58.467 45.455 0.00 0.00 0.00 2.29
519 524 3.917629 TGGGTAGGGTACATGAGGAAAAA 59.082 43.478 0.00 0.00 0.00 1.94
528 533 6.040504 GGGTACATGAGGAAAAACCAATATCC 59.959 42.308 0.00 0.00 42.04 2.59
530 535 6.530019 ACATGAGGAAAAACCAATATCCAC 57.470 37.500 0.00 0.00 42.04 4.02
542 547 4.111916 CCAATATCCACGGACAAATTTGC 58.888 43.478 18.12 10.56 0.00 3.68
631 636 9.442033 CAACATAGTACTGTATGATTTTGCATG 57.558 33.333 11.75 2.91 34.88 4.06
724 1294 0.661020 CACCAACCGAAGACAACCAC 59.339 55.000 0.00 0.00 0.00 4.16
871 1441 3.407967 GCCCATCCCGTTCCTCCA 61.408 66.667 0.00 0.00 0.00 3.86
1187 1767 2.287427 CGGTCGTAGCCTGTAGTTATGG 60.287 54.545 0.00 0.00 0.00 2.74
1188 1768 2.954318 GGTCGTAGCCTGTAGTTATGGA 59.046 50.000 0.00 0.00 0.00 3.41
1189 1769 3.004524 GGTCGTAGCCTGTAGTTATGGAG 59.995 52.174 0.00 0.00 0.00 3.86
1190 1770 3.631227 GTCGTAGCCTGTAGTTATGGAGT 59.369 47.826 0.00 0.00 0.00 3.85
1191 1771 4.818546 GTCGTAGCCTGTAGTTATGGAGTA 59.181 45.833 0.00 0.00 0.00 2.59
1192 1772 5.049543 GTCGTAGCCTGTAGTTATGGAGTAG 60.050 48.000 0.00 0.00 0.00 2.57
1211 1791 3.300239 AGTAGATCGCTAGAAGGGTGT 57.700 47.619 0.00 0.00 0.00 4.16
1238 1818 3.829948 AGCTTGTGAATTTCGATTGCTG 58.170 40.909 0.00 0.00 0.00 4.41
1239 1819 2.343544 GCTTGTGAATTTCGATTGCTGC 59.656 45.455 0.00 0.00 0.00 5.25
1240 1820 2.245795 TGTGAATTTCGATTGCTGCG 57.754 45.000 0.00 0.00 0.00 5.18
1241 1821 1.535028 TGTGAATTTCGATTGCTGCGT 59.465 42.857 0.00 0.00 0.00 5.24
1289 1870 2.899838 GTGCAGTTGACGGCCACA 60.900 61.111 2.24 0.00 36.20 4.17
1292 1873 2.607892 GCAGTTGACGGCCACACTC 61.608 63.158 2.24 0.00 0.00 3.51
1311 1892 4.025401 GGTGGTTGGCTCGTTGCG 62.025 66.667 0.00 0.00 44.05 4.85
1363 1957 1.873698 TGTTGTGGCGTTCCTAACTC 58.126 50.000 0.00 0.00 33.93 3.01
1404 2485 3.144506 AGTTTTGATGAGTGAGGCACTG 58.855 45.455 4.60 0.00 45.44 3.66
1405 2486 3.141398 GTTTTGATGAGTGAGGCACTGA 58.859 45.455 4.60 0.00 45.44 3.41
1406 2487 2.756840 TTGATGAGTGAGGCACTGAG 57.243 50.000 4.60 0.00 45.44 3.35
1407 2488 0.900421 TGATGAGTGAGGCACTGAGG 59.100 55.000 4.60 0.00 45.44 3.86
1408 2489 0.461693 GATGAGTGAGGCACTGAGGC 60.462 60.000 4.60 0.00 45.44 4.70
1409 2490 1.196766 ATGAGTGAGGCACTGAGGCA 61.197 55.000 4.60 0.00 45.44 4.75
1410 2491 1.375268 GAGTGAGGCACTGAGGCAC 60.375 63.158 4.60 0.00 45.44 5.01
1411 2492 1.825281 GAGTGAGGCACTGAGGCACT 61.825 60.000 4.60 0.00 45.44 4.40
1454 2538 5.525012 TGCATAGTTCATTTCATCTCTTCCG 59.475 40.000 0.00 0.00 0.00 4.30
1517 2603 7.724305 AGTCGAAATTTTACTTCTACTGCAA 57.276 32.000 0.00 0.00 30.19 4.08
1518 2604 7.797819 AGTCGAAATTTTACTTCTACTGCAAG 58.202 34.615 0.00 0.00 42.29 4.01
1530 2628 1.528129 ACTGCAAGCCAGCTAACTTC 58.472 50.000 0.00 0.00 45.78 3.01
1602 2700 5.819901 CACCATAGATTTCCAAGAGGTCTTC 59.180 44.000 0.00 0.00 33.11 2.87
1651 2750 6.423905 ACATCTCGTAATATTCCCAATGTTCG 59.576 38.462 0.00 0.00 0.00 3.95
1665 2764 3.982576 ATGTTCGAAAAAGCGGAAAGT 57.017 38.095 0.00 0.00 0.00 2.66
1671 2770 3.872771 TCGAAAAAGCGGAAAGTGTAAGT 59.127 39.130 0.00 0.00 0.00 2.24
1672 2771 4.025480 TCGAAAAAGCGGAAAGTGTAAGTC 60.025 41.667 0.00 0.00 0.00 3.01
1921 3031 6.098838 AGACACAACCTAATAGAGATCATGCA 59.901 38.462 0.00 0.00 0.00 3.96
1925 3035 4.166539 ACCTAATAGAGATCATGCAGCCT 58.833 43.478 0.00 0.00 0.00 4.58
1931 3041 3.215151 AGAGATCATGCAGCCTGAATTG 58.785 45.455 4.31 0.00 0.00 2.32
1989 3099 9.454859 AGAGCCTAATAATAAGATAAATGGCAC 57.545 33.333 0.00 0.00 39.10 5.01
2041 3151 6.253512 GCAGAAGTAGTTCAAAAACAACCAAG 59.746 38.462 12.77 0.00 37.88 3.61
2119 3229 1.160137 GCGTTTTGCCATCTCTCAGT 58.840 50.000 0.00 0.00 37.76 3.41
2120 3230 1.129437 GCGTTTTGCCATCTCTCAGTC 59.871 52.381 0.00 0.00 37.76 3.51
2126 3236 4.908601 TTGCCATCTCTCAGTCCTTAAA 57.091 40.909 0.00 0.00 0.00 1.52
2127 3237 4.908601 TGCCATCTCTCAGTCCTTAAAA 57.091 40.909 0.00 0.00 0.00 1.52
2130 3240 4.396478 GCCATCTCTCAGTCCTTAAAAACC 59.604 45.833 0.00 0.00 0.00 3.27
2132 3242 4.267349 TCTCTCAGTCCTTAAAAACCCG 57.733 45.455 0.00 0.00 0.00 5.28
2133 3243 2.742589 CTCTCAGTCCTTAAAAACCCGC 59.257 50.000 0.00 0.00 0.00 6.13
2134 3244 2.370849 TCTCAGTCCTTAAAAACCCGCT 59.629 45.455 0.00 0.00 0.00 5.52
2135 3245 3.146847 CTCAGTCCTTAAAAACCCGCTT 58.853 45.455 0.00 0.00 0.00 4.68
2136 3246 4.040706 TCTCAGTCCTTAAAAACCCGCTTA 59.959 41.667 0.00 0.00 0.00 3.09
2137 3247 4.716794 TCAGTCCTTAAAAACCCGCTTAA 58.283 39.130 0.00 0.00 0.00 1.85
2138 3248 5.318630 TCAGTCCTTAAAAACCCGCTTAAT 58.681 37.500 0.00 0.00 0.00 1.40
2139 3249 6.474630 TCAGTCCTTAAAAACCCGCTTAATA 58.525 36.000 0.00 0.00 0.00 0.98
2140 3250 7.114095 TCAGTCCTTAAAAACCCGCTTAATAT 58.886 34.615 0.00 0.00 0.00 1.28
2141 3251 8.266473 TCAGTCCTTAAAAACCCGCTTAATATA 58.734 33.333 0.00 0.00 0.00 0.86
2142 3252 8.340443 CAGTCCTTAAAAACCCGCTTAATATAC 58.660 37.037 0.00 0.00 0.00 1.47
2179 3289 6.071952 GCTTTCTTGAACACTGAATATTCCCA 60.072 38.462 12.90 0.00 0.00 4.37
2229 3341 1.724582 AAGTGCCTGTGCGTTGGAAC 61.725 55.000 0.00 0.00 41.78 3.62
2243 3355 3.777478 GTTGGAACGGATCTACAATCGA 58.223 45.455 0.00 0.00 0.00 3.59
2245 3357 3.021695 TGGAACGGATCTACAATCGACT 58.978 45.455 0.00 0.00 0.00 4.18
2250 3362 5.769484 ACGGATCTACAATCGACTAATGT 57.231 39.130 0.00 0.00 0.00 2.71
2352 3464 2.972021 AGGGGTTTTCTGAAATGTTGGG 59.028 45.455 3.31 0.00 0.00 4.12
2403 3515 1.538047 CCACAGCTTACCTTGCATGT 58.462 50.000 0.00 0.00 0.00 3.21
2478 3601 7.265599 TCACCAACTGGATCTTTTATAGGAA 57.734 36.000 1.86 0.00 38.94 3.36
2541 3665 6.572167 TGAGAATGTTTTCATACATGCACA 57.428 33.333 0.00 0.00 39.94 4.57
2585 3709 3.164268 ACCATTCAATAAACCTGCAGCA 58.836 40.909 8.66 0.00 0.00 4.41
2608 3732 3.270027 TGTGCTGTAATCCTGTATGTGC 58.730 45.455 0.00 0.00 0.00 4.57
2609 3733 2.614057 GTGCTGTAATCCTGTATGTGCC 59.386 50.000 0.00 0.00 0.00 5.01
2610 3734 2.238395 TGCTGTAATCCTGTATGTGCCA 59.762 45.455 0.00 0.00 0.00 4.92
2611 3735 3.117926 TGCTGTAATCCTGTATGTGCCAT 60.118 43.478 0.00 0.00 0.00 4.40
2612 3736 3.251729 GCTGTAATCCTGTATGTGCCATG 59.748 47.826 0.00 0.00 0.00 3.66
2613 3737 3.817084 CTGTAATCCTGTATGTGCCATGG 59.183 47.826 7.63 7.63 0.00 3.66
2614 3738 3.201930 TGTAATCCTGTATGTGCCATGGT 59.798 43.478 14.67 0.00 0.00 3.55
2615 3739 3.386932 AATCCTGTATGTGCCATGGTT 57.613 42.857 14.67 0.00 0.00 3.67
2616 3740 2.897271 TCCTGTATGTGCCATGGTTT 57.103 45.000 14.67 0.00 0.00 3.27
2617 3741 3.168035 TCCTGTATGTGCCATGGTTTT 57.832 42.857 14.67 0.00 0.00 2.43
2618 3742 3.088532 TCCTGTATGTGCCATGGTTTTC 58.911 45.455 14.67 0.00 0.00 2.29
2619 3743 2.159393 CCTGTATGTGCCATGGTTTTCG 60.159 50.000 14.67 0.00 0.00 3.46
2620 3744 2.746904 CTGTATGTGCCATGGTTTTCGA 59.253 45.455 14.67 0.00 0.00 3.71
2621 3745 2.746904 TGTATGTGCCATGGTTTTCGAG 59.253 45.455 14.67 0.00 0.00 4.04
2622 3746 1.909700 ATGTGCCATGGTTTTCGAGT 58.090 45.000 14.67 0.00 0.00 4.18
2623 3747 1.234821 TGTGCCATGGTTTTCGAGTC 58.765 50.000 14.67 0.00 0.00 3.36
2624 3748 0.165944 GTGCCATGGTTTTCGAGTCG 59.834 55.000 14.67 6.09 0.00 4.18
2625 3749 1.134694 GCCATGGTTTTCGAGTCGC 59.865 57.895 14.67 0.00 0.00 5.19
2626 3750 1.419922 CCATGGTTTTCGAGTCGCG 59.580 57.895 7.92 0.00 42.69 5.87
2637 3761 3.102985 AGTCGCGACTCATCCGAG 58.897 61.111 34.98 0.00 45.49 4.63
2647 3771 2.015736 CTCATCCGAGTCACTTTGGG 57.984 55.000 0.00 0.00 34.29 4.12
2648 3772 0.613260 TCATCCGAGTCACTTTGGGG 59.387 55.000 0.00 0.00 0.00 4.96
2649 3773 0.324943 CATCCGAGTCACTTTGGGGT 59.675 55.000 0.00 0.00 0.00 4.95
2650 3774 1.553248 CATCCGAGTCACTTTGGGGTA 59.447 52.381 0.00 0.00 0.00 3.69
2651 3775 1.263356 TCCGAGTCACTTTGGGGTAG 58.737 55.000 0.00 0.00 0.00 3.18
2652 3776 0.391263 CCGAGTCACTTTGGGGTAGC 60.391 60.000 0.00 0.00 0.00 3.58
2653 3777 0.736325 CGAGTCACTTTGGGGTAGCG 60.736 60.000 0.00 0.00 0.00 4.26
2654 3778 0.606604 GAGTCACTTTGGGGTAGCGA 59.393 55.000 0.00 0.00 0.00 4.93
2655 3779 0.320697 AGTCACTTTGGGGTAGCGAC 59.679 55.000 0.00 0.00 0.00 5.19
2656 3780 0.320697 GTCACTTTGGGGTAGCGACT 59.679 55.000 0.00 0.00 0.00 4.18
2657 3781 0.606604 TCACTTTGGGGTAGCGACTC 59.393 55.000 0.00 0.00 0.00 3.36
2658 3782 0.736325 CACTTTGGGGTAGCGACTCG 60.736 60.000 0.00 0.00 0.00 4.18
2659 3783 1.153628 CTTTGGGGTAGCGACTCGG 60.154 63.158 0.00 0.00 0.00 4.63
2660 3784 1.601419 CTTTGGGGTAGCGACTCGGA 61.601 60.000 0.00 0.00 0.00 4.55
2661 3785 1.186917 TTTGGGGTAGCGACTCGGAA 61.187 55.000 0.00 0.00 0.00 4.30
2662 3786 1.186917 TTGGGGTAGCGACTCGGAAA 61.187 55.000 0.00 0.00 0.00 3.13
2663 3787 1.186917 TGGGGTAGCGACTCGGAAAA 61.187 55.000 0.00 0.00 0.00 2.29
2664 3788 0.037046 GGGGTAGCGACTCGGAAAAA 60.037 55.000 0.00 0.00 0.00 1.94
2665 3789 1.356938 GGGTAGCGACTCGGAAAAAG 58.643 55.000 0.00 0.00 0.00 2.27
2666 3790 1.337541 GGGTAGCGACTCGGAAAAAGT 60.338 52.381 0.00 0.00 0.00 2.66
2667 3791 1.991264 GGTAGCGACTCGGAAAAAGTC 59.009 52.381 0.00 0.00 39.82 3.01
2673 3797 3.516578 CTCGGAAAAAGTCGAGCCT 57.483 52.632 0.00 0.00 44.68 4.58
2674 3798 1.071605 CTCGGAAAAAGTCGAGCCTG 58.928 55.000 0.00 0.00 44.68 4.85
2675 3799 0.949105 TCGGAAAAAGTCGAGCCTGC 60.949 55.000 0.00 0.00 0.00 4.85
2676 3800 1.227999 CGGAAAAAGTCGAGCCTGCA 61.228 55.000 0.00 0.00 0.00 4.41
2677 3801 0.519077 GGAAAAAGTCGAGCCTGCAG 59.481 55.000 6.78 6.78 0.00 4.41
2678 3802 0.110010 GAAAAAGTCGAGCCTGCAGC 60.110 55.000 8.66 3.91 44.25 5.25
2691 3815 3.352222 GCAGCTGCAGTTGCGACT 61.352 61.111 34.78 11.45 42.06 4.18
2692 3816 2.029288 GCAGCTGCAGTTGCGACTA 61.029 57.895 34.78 0.00 42.06 2.59
2693 3817 1.964290 GCAGCTGCAGTTGCGACTAG 61.964 60.000 34.78 8.51 42.06 2.57
2694 3818 0.668706 CAGCTGCAGTTGCGACTAGT 60.669 55.000 18.01 0.00 45.83 2.57
2695 3819 0.389166 AGCTGCAGTTGCGACTAGTC 60.389 55.000 16.64 13.18 45.83 2.59
2725 3849 3.809918 GACTCGAGTCGACACTAAGTT 57.190 47.619 28.46 0.00 35.12 2.66
2726 3850 3.480894 GACTCGAGTCGACACTAAGTTG 58.519 50.000 28.46 0.87 35.12 3.16
2727 3851 3.136763 ACTCGAGTCGACACTAAGTTGA 58.863 45.455 19.50 4.20 38.33 3.18
2728 3852 3.186817 ACTCGAGTCGACACTAAGTTGAG 59.813 47.826 19.50 15.73 41.31 3.02
2729 3853 3.136763 TCGAGTCGACACTAAGTTGAGT 58.863 45.455 19.50 0.00 45.19 3.41
2738 3862 6.526566 GACACTAAGTTGAGTCGACATTTT 57.473 37.500 19.50 7.13 0.00 1.82
2739 3863 6.920569 ACACTAAGTTGAGTCGACATTTTT 57.079 33.333 19.50 7.82 0.00 1.94
2771 3895 4.531912 CTAGTCGCGCGGCTCGAA 62.532 66.667 42.56 23.46 41.67 3.71
2772 3896 4.105733 TAGTCGCGCGGCTCGAAA 62.106 61.111 42.56 21.87 41.67 3.46
2773 3897 3.405592 TAGTCGCGCGGCTCGAAAT 62.406 57.895 42.56 19.44 41.67 2.17
2774 3898 4.267013 GTCGCGCGGCTCGAAATC 62.267 66.667 29.62 1.00 41.67 2.17
2777 3901 3.272334 GCGCGGCTCGAAATCCAT 61.272 61.111 8.83 0.00 41.67 3.41
2778 3902 2.628106 CGCGGCTCGAAATCCATG 59.372 61.111 0.00 0.00 41.67 3.66
2779 3903 2.885676 CGCGGCTCGAAATCCATGG 61.886 63.158 4.97 4.97 41.67 3.66
2780 3904 1.819632 GCGGCTCGAAATCCATGGT 60.820 57.895 12.58 0.00 0.00 3.55
2781 3905 0.531974 GCGGCTCGAAATCCATGGTA 60.532 55.000 12.58 0.00 0.00 3.25
2782 3906 1.878102 GCGGCTCGAAATCCATGGTAT 60.878 52.381 12.58 0.98 0.00 2.73
2783 3907 1.800586 CGGCTCGAAATCCATGGTATG 59.199 52.381 12.58 0.00 0.00 2.39
2784 3908 2.806745 CGGCTCGAAATCCATGGTATGT 60.807 50.000 12.58 0.00 0.00 2.29
2785 3909 2.549754 GGCTCGAAATCCATGGTATGTG 59.450 50.000 12.58 0.58 0.00 3.21
2836 3960 9.922305 CTTACACTAGTTTAATATTGAGCAAGC 57.078 33.333 2.04 0.00 0.00 4.01
2910 4037 9.733556 AGGACACTAAAACATGTAAATATGACA 57.266 29.630 0.00 0.00 0.00 3.58
3022 4151 7.436376 CACCATGTCCTTTTCTTTCTTTCTTTC 59.564 37.037 0.00 0.00 0.00 2.62
3023 4152 6.638468 CCATGTCCTTTTCTTTCTTTCTTTCG 59.362 38.462 0.00 0.00 0.00 3.46
3024 4153 6.753107 TGTCCTTTTCTTTCTTTCTTTCGT 57.247 33.333 0.00 0.00 0.00 3.85
3025 4154 7.153217 TGTCCTTTTCTTTCTTTCTTTCGTT 57.847 32.000 0.00 0.00 0.00 3.85
3026 4155 7.248437 TGTCCTTTTCTTTCTTTCTTTCGTTC 58.752 34.615 0.00 0.00 0.00 3.95
3027 4156 7.120726 TGTCCTTTTCTTTCTTTCTTTCGTTCT 59.879 33.333 0.00 0.00 0.00 3.01
3028 4157 7.968956 GTCCTTTTCTTTCTTTCTTTCGTTCTT 59.031 33.333 0.00 0.00 0.00 2.52
3029 4158 8.520351 TCCTTTTCTTTCTTTCTTTCGTTCTTT 58.480 29.630 0.00 0.00 0.00 2.52
3030 4159 8.799091 CCTTTTCTTTCTTTCTTTCGTTCTTTC 58.201 33.333 0.00 0.00 0.00 2.62
3031 4160 9.561270 CTTTTCTTTCTTTCTTTCGTTCTTTCT 57.439 29.630 0.00 0.00 0.00 2.52
3032 4161 9.908152 TTTTCTTTCTTTCTTTCGTTCTTTCTT 57.092 25.926 0.00 0.00 0.00 2.52
3033 4162 9.908152 TTTCTTTCTTTCTTTCGTTCTTTCTTT 57.092 25.926 0.00 0.00 0.00 2.52
3034 4163 9.556030 TTCTTTCTTTCTTTCGTTCTTTCTTTC 57.444 29.630 0.00 0.00 0.00 2.62
3035 4164 8.947115 TCTTTCTTTCTTTCGTTCTTTCTTTCT 58.053 29.630 0.00 0.00 0.00 2.52
3036 4165 9.561270 CTTTCTTTCTTTCGTTCTTTCTTTCTT 57.439 29.630 0.00 0.00 0.00 2.52
3037 4166 9.908152 TTTCTTTCTTTCGTTCTTTCTTTCTTT 57.092 25.926 0.00 0.00 0.00 2.52
3040 4169 9.129209 CTTTCTTTCGTTCTTTCTTTCTTTTGT 57.871 29.630 0.00 0.00 0.00 2.83
3047 4176 6.506827 CGTTCTTTCTTTCTTTTGTGCACATG 60.507 38.462 22.39 13.94 0.00 3.21
3068 4197 8.777413 CACATGTATTTATTATCACCTGGACAG 58.223 37.037 0.00 0.00 0.00 3.51
3157 4286 8.777865 TCAGTTATCACTTCAATAGGAAACAG 57.222 34.615 0.00 0.00 34.44 3.16
3194 4323 6.469782 TTTTGCTTCTCTCACTTTCCATTT 57.530 33.333 0.00 0.00 0.00 2.32
3225 4354 6.603940 ATTTGGTTGCACATACCTTTACAT 57.396 33.333 7.54 0.00 36.60 2.29
3245 4374 9.590451 TTTACATTTAGTGACTAAACCCTATCG 57.410 33.333 18.99 5.77 38.51 2.92
3256 4385 7.120923 ACTAAACCCTATCGTGTTCATGTAT 57.879 36.000 0.00 0.00 0.00 2.29
3604 4733 8.009974 GTCTGTGATGTTTGTGTATTTGTCTAC 58.990 37.037 0.00 0.00 0.00 2.59
3656 4785 9.859427 CTTAACAAGCCATATGATTTTCTGAAA 57.141 29.630 3.65 0.00 0.00 2.69
3782 4922 9.573133 CTGGAATTTTCTATTGCGAAAAGTAAT 57.427 29.630 5.19 0.00 43.65 1.89
3844 4997 4.337274 ACAAGCAGGTGGTACAAAAACTAC 59.663 41.667 0.00 0.00 44.16 2.73
3847 5000 4.578928 AGCAGGTGGTACAAAAACTACAAG 59.421 41.667 0.00 0.00 44.16 3.16
3965 5131 0.827507 TTTCCTGAGGGCCTGTTTGC 60.828 55.000 12.95 0.00 0.00 3.68
4036 5202 8.733458 CCAAAGATGATTCAGTGATGAAACTAA 58.267 33.333 0.00 0.00 0.00 2.24
4049 5216 8.230486 AGTGATGAAACTAAAGTTGCTAATTCG 58.770 33.333 2.60 0.00 38.44 3.34
4060 5227 8.723942 AAAGTTGCTAATTCGATGTAGAGATT 57.276 30.769 6.99 0.00 0.00 2.40
4064 5231 9.464714 GTTGCTAATTCGATGTAGAGATTCTAA 57.535 33.333 6.99 0.00 29.58 2.10
4090 5257 8.782339 TCAATGTATACATCATGTCATCATCC 57.218 34.615 18.52 0.00 35.10 3.51
4091 5258 8.599792 TCAATGTATACATCATGTCATCATCCT 58.400 33.333 18.52 0.00 35.10 3.24
4092 5259 9.227777 CAATGTATACATCATGTCATCATCCTT 57.772 33.333 18.52 0.00 35.10 3.36
4132 5382 5.242171 TGTCCTATCTCATTCGCCGTTATTA 59.758 40.000 0.00 0.00 0.00 0.98
4282 5532 5.010282 ACATCCGATTTTGGACTTAGCTTT 58.990 37.500 0.00 0.00 41.85 3.51
4483 5736 7.741027 AATGAAGTCTGCTGTATTGGATATG 57.259 36.000 0.00 0.00 0.00 1.78
4558 5812 7.566879 ACCATATTTCCTTCTCTCTGTACTGAT 59.433 37.037 2.62 0.00 0.00 2.90
4559 5813 9.083422 CCATATTTCCTTCTCTCTGTACTGATA 57.917 37.037 2.62 0.00 0.00 2.15
4693 5962 1.475930 GGGAGGCTTCAGCTGTATTCC 60.476 57.143 14.67 13.83 41.70 3.01
4771 6041 2.283145 ACTAGCAATGCCATCATCCC 57.717 50.000 0.00 0.00 31.27 3.85
4839 6110 3.230134 ACCAGCATTCCTGTTAAAGCAA 58.770 40.909 0.00 0.00 40.06 3.91
4868 6161 6.889722 CCCATACTTCCCTCAGTTTTCATTTA 59.110 38.462 0.00 0.00 0.00 1.40
4899 6801 8.745464 TGTCATTAATGTCATGTCATTGTTTG 57.255 30.769 23.09 17.44 38.32 2.93
4991 6903 5.176592 AGCGTAAACCTTCTTATGTCTTCC 58.823 41.667 0.00 0.00 0.00 3.46
5074 6986 2.677836 TGTTCAGCTATTTGATGTCCGC 59.322 45.455 0.00 0.00 33.14 5.54
5153 7065 6.259829 GGAAGATTCTTATGAAGTGCTTCCTC 59.740 42.308 24.67 9.28 44.53 3.71
5243 7156 1.628846 TCCAGGCCTTCAAAGAGGTAC 59.371 52.381 0.00 0.00 39.11 3.34
5268 7181 4.991056 GCTTTACTGAGTCTTGACACATGA 59.009 41.667 0.00 0.00 0.00 3.07
5276 7189 5.237127 TGAGTCTTGACACATGATGACAAAC 59.763 40.000 0.00 8.13 41.44 2.93
5304 7217 8.349245 GTGCACATATATATAACTGTTTTGCCA 58.651 33.333 13.17 0.00 0.00 4.92
5507 7420 7.864108 TGGTGAATTCGAATTGATGAAGTAT 57.136 32.000 27.27 0.00 0.00 2.12
5600 7513 6.033966 GGATTTTGACGGACATATTTGTTCC 58.966 40.000 0.00 0.00 35.79 3.62
5827 7740 2.683867 TGGTGTTGTGGTTAAAGTTCCG 59.316 45.455 0.00 0.00 0.00 4.30
5956 7869 8.836413 TGTCTAATATTTGCACTATACCAAAGC 58.164 33.333 0.00 0.00 34.77 3.51
5975 7888 2.865343 CCAGTATGTGGGTCGTAGTC 57.135 55.000 0.00 0.00 43.63 2.59
5983 7896 1.117150 TGGGTCGTAGTCTAATGGGC 58.883 55.000 0.00 0.00 0.00 5.36
5989 7902 4.280174 GGTCGTAGTCTAATGGGCTTGATA 59.720 45.833 0.00 0.00 0.00 2.15
6017 7930 7.068103 TGTGAATTGTTCAGAATGGTGTAAACT 59.932 33.333 0.00 0.00 41.01 2.66
6052 7965 1.565390 ATGCCCTGCCTAGCTGTGAA 61.565 55.000 0.00 0.00 0.00 3.18
6073 7986 7.068103 TGTGAATTGTTCAGAATGGTGTAAACT 59.932 33.333 0.00 0.00 41.01 2.66
6157 8070 4.762251 GCATGTACTGGGAGTTCTTTTTCT 59.238 41.667 0.00 0.00 0.00 2.52
6343 8256 0.533755 GGCCACCGATTCAGATGGAG 60.534 60.000 0.00 0.00 33.80 3.86
6413 8326 2.371510 AGATGGCTATGAGCTTTCCTCC 59.628 50.000 0.00 0.00 41.99 4.30
6418 8331 2.433970 GCTATGAGCTTTCCTCCACTCT 59.566 50.000 0.00 0.00 39.98 3.24
6419 8332 3.740764 GCTATGAGCTTTCCTCCACTCTG 60.741 52.174 0.00 0.00 39.98 3.35
6485 8399 4.065321 AGCAAAGAATCCCAGTATCTCG 57.935 45.455 0.00 0.00 0.00 4.04
6564 8478 6.155393 TGGTTGACCTTGGAGTATTTTTGTTT 59.845 34.615 1.34 0.00 36.82 2.83
6595 8509 7.498239 AGCCTTCATGCATATAATGTGCTATAG 59.502 37.037 0.00 0.00 42.92 1.31
6598 8512 6.057533 TCATGCATATAATGTGCTATAGGCC 58.942 40.000 0.00 0.00 39.61 5.19
6654 8576 8.874156 TCCTGCACTCTTATTCACTATGATATT 58.126 33.333 0.00 0.00 0.00 1.28
6690 8612 0.445436 CGATGTTCACTGCTTCTGGC 59.555 55.000 0.00 0.00 42.22 4.85
6738 8660 6.494893 TGTGGAGCAAGTACAATATGAAAC 57.505 37.500 0.00 0.00 0.00 2.78
6908 8830 4.439974 GGCTCATTATTTCGTGGATTTGCA 60.440 41.667 0.00 0.00 0.00 4.08
6942 8864 9.623000 TTTTGTACTCATCATGATTGATCAGAT 57.377 29.630 5.16 0.00 40.70 2.90
6963 8885 3.687125 TGGCACGTAAATTATGACCCAA 58.313 40.909 0.00 0.00 0.00 4.12
6968 8890 5.448089 GCACGTAAATTATGACCCAATTCGT 60.448 40.000 0.00 0.00 30.52 3.85
6979 8901 2.428890 ACCCAATTCGTTGCAAGTTTGA 59.571 40.909 0.00 0.00 0.00 2.69
7152 9075 3.365265 CCCCTTGCCAGTTCGTGC 61.365 66.667 0.00 0.00 0.00 5.34
7162 9085 1.939934 CCAGTTCGTGCTGTTTTCTCA 59.060 47.619 7.85 0.00 34.84 3.27
7167 9090 4.024556 AGTTCGTGCTGTTTTCTCATTGAG 60.025 41.667 7.38 7.38 0.00 3.02
7482 9406 1.751924 ACTACTGCTGCTGCTACTACC 59.248 52.381 17.00 0.00 40.48 3.18
7489 9413 2.950309 GCTGCTGCTACTACCACTACTA 59.050 50.000 8.53 0.00 36.03 1.82
7622 9574 8.550376 CAATTATTGTGTTTTGGAAGGAGTTTG 58.450 33.333 0.00 0.00 0.00 2.93
7713 9677 7.586349 AGTTTGACCATTTGGATCCTATACAT 58.414 34.615 14.23 0.00 38.94 2.29
7765 10219 3.871006 CACATGTCGATTAGCCAGCTTAA 59.129 43.478 0.00 0.00 0.00 1.85
7767 10221 4.941263 ACATGTCGATTAGCCAGCTTAAAA 59.059 37.500 0.00 0.00 0.00 1.52
7769 10223 3.369756 TGTCGATTAGCCAGCTTAAAACG 59.630 43.478 0.00 0.00 0.00 3.60
7771 10225 2.933906 CGATTAGCCAGCTTAAAACGGA 59.066 45.455 0.00 0.00 0.00 4.69
7791 10245 7.797038 ACGGAGTAGTTTTGTCATTAGTTTT 57.203 32.000 0.00 0.00 41.94 2.43
7813 10267 7.660030 TTTGAAGGGAGTCATTTCTTCTTTT 57.340 32.000 12.59 0.00 37.21 2.27
7814 10268 6.639632 TGAAGGGAGTCATTTCTTCTTTTG 57.360 37.500 12.59 0.00 37.21 2.44
7817 10271 3.573967 GGGAGTCATTTCTTCTTTTGCCA 59.426 43.478 0.00 0.00 0.00 4.92
7818 10272 4.221482 GGGAGTCATTTCTTCTTTTGCCAT 59.779 41.667 0.00 0.00 0.00 4.40
7819 10273 5.418840 GGGAGTCATTTCTTCTTTTGCCATA 59.581 40.000 0.00 0.00 0.00 2.74
7820 10274 6.405176 GGGAGTCATTTCTTCTTTTGCCATAG 60.405 42.308 0.00 0.00 0.00 2.23
7821 10275 5.958955 AGTCATTTCTTCTTTTGCCATAGC 58.041 37.500 0.00 0.00 40.48 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.215399 TGTGATTCCTTGGAATGACGAAAC 59.785 41.667 20.94 7.46 32.58 2.78
2 3 4.393834 TGTGATTCCTTGGAATGACGAAA 58.606 39.130 20.94 6.86 32.58 3.46
3 4 4.014569 TGTGATTCCTTGGAATGACGAA 57.985 40.909 20.94 7.43 32.58 3.85
4 5 3.694043 TGTGATTCCTTGGAATGACGA 57.306 42.857 20.94 11.44 32.58 4.20
5 6 5.359756 TCTATGTGATTCCTTGGAATGACG 58.640 41.667 20.94 11.21 32.58 4.35
6 7 6.599244 TGTTCTATGTGATTCCTTGGAATGAC 59.401 38.462 20.06 20.06 30.98 3.06
7 8 6.720309 TGTTCTATGTGATTCCTTGGAATGA 58.280 36.000 18.46 8.44 0.00 2.57
8 9 7.578310 ATGTTCTATGTGATTCCTTGGAATG 57.422 36.000 18.46 4.57 0.00 2.67
9 10 9.293404 CATATGTTCTATGTGATTCCTTGGAAT 57.707 33.333 14.09 14.09 0.00 3.01
10 11 7.720957 CCATATGTTCTATGTGATTCCTTGGAA 59.279 37.037 4.43 4.43 0.00 3.53
11 12 7.226441 CCATATGTTCTATGTGATTCCTTGGA 58.774 38.462 1.24 0.00 0.00 3.53
12 13 6.432162 CCCATATGTTCTATGTGATTCCTTGG 59.568 42.308 1.24 0.00 0.00 3.61
13 14 6.432162 CCCCATATGTTCTATGTGATTCCTTG 59.568 42.308 1.24 0.00 0.00 3.61
14 15 6.332635 TCCCCATATGTTCTATGTGATTCCTT 59.667 38.462 1.24 0.00 0.00 3.36
15 16 5.851693 TCCCCATATGTTCTATGTGATTCCT 59.148 40.000 1.24 0.00 0.00 3.36
16 17 6.126863 TCCCCATATGTTCTATGTGATTCC 57.873 41.667 1.24 0.00 0.00 3.01
17 18 6.652481 CACTCCCCATATGTTCTATGTGATTC 59.348 42.308 1.24 0.00 0.00 2.52
18 19 6.466326 CCACTCCCCATATGTTCTATGTGATT 60.466 42.308 1.24 0.00 0.00 2.57
19 20 5.013495 CCACTCCCCATATGTTCTATGTGAT 59.987 44.000 1.24 0.00 0.00 3.06
20 21 4.347876 CCACTCCCCATATGTTCTATGTGA 59.652 45.833 1.24 0.00 0.00 3.58
21 22 4.645535 CCACTCCCCATATGTTCTATGTG 58.354 47.826 1.24 3.49 0.00 3.21
22 23 3.073062 GCCACTCCCCATATGTTCTATGT 59.927 47.826 1.24 0.00 0.00 2.29
23 24 3.679389 GCCACTCCCCATATGTTCTATG 58.321 50.000 1.24 0.00 0.00 2.23
24 25 2.303022 CGCCACTCCCCATATGTTCTAT 59.697 50.000 1.24 0.00 0.00 1.98
25 26 1.691976 CGCCACTCCCCATATGTTCTA 59.308 52.381 1.24 0.00 0.00 2.10
26 27 0.469917 CGCCACTCCCCATATGTTCT 59.530 55.000 1.24 0.00 0.00 3.01
27 28 0.535102 CCGCCACTCCCCATATGTTC 60.535 60.000 1.24 0.00 0.00 3.18
28 29 1.531748 CCGCCACTCCCCATATGTT 59.468 57.895 1.24 0.00 0.00 2.71
29 30 2.452064 CCCGCCACTCCCCATATGT 61.452 63.158 1.24 0.00 0.00 2.29
30 31 2.431683 CCCGCCACTCCCCATATG 59.568 66.667 0.00 0.00 0.00 1.78
31 32 3.570212 GCCCGCCACTCCCCATAT 61.570 66.667 0.00 0.00 0.00 1.78
32 33 4.815973 AGCCCGCCACTCCCCATA 62.816 66.667 0.00 0.00 0.00 2.74
61 62 1.204146 ACCTACAGTAGCCCACATGG 58.796 55.000 1.50 0.00 37.09 3.66
62 63 3.270877 GAAACCTACAGTAGCCCACATG 58.729 50.000 1.50 0.00 0.00 3.21
63 64 2.093658 CGAAACCTACAGTAGCCCACAT 60.094 50.000 1.50 0.00 0.00 3.21
64 65 1.274167 CGAAACCTACAGTAGCCCACA 59.726 52.381 1.50 0.00 0.00 4.17
65 66 1.405121 CCGAAACCTACAGTAGCCCAC 60.405 57.143 1.50 0.00 0.00 4.61
66 67 0.899720 CCGAAACCTACAGTAGCCCA 59.100 55.000 1.50 0.00 0.00 5.36
67 68 0.177373 CCCGAAACCTACAGTAGCCC 59.823 60.000 1.50 0.00 0.00 5.19
68 69 0.177373 CCCCGAAACCTACAGTAGCC 59.823 60.000 1.50 0.00 0.00 3.93
69 70 1.136500 CTCCCCGAAACCTACAGTAGC 59.864 57.143 1.50 0.00 0.00 3.58
70 71 1.755380 CCTCCCCGAAACCTACAGTAG 59.245 57.143 0.00 0.00 0.00 2.57
71 72 1.620524 CCCTCCCCGAAACCTACAGTA 60.621 57.143 0.00 0.00 0.00 2.74
72 73 0.908180 CCCTCCCCGAAACCTACAGT 60.908 60.000 0.00 0.00 0.00 3.55
73 74 1.905512 CCCTCCCCGAAACCTACAG 59.094 63.158 0.00 0.00 0.00 2.74
74 75 2.295602 GCCCTCCCCGAAACCTACA 61.296 63.158 0.00 0.00 0.00 2.74
75 76 2.588439 GCCCTCCCCGAAACCTAC 59.412 66.667 0.00 0.00 0.00 3.18
76 77 2.689771 GGCCCTCCCCGAAACCTA 60.690 66.667 0.00 0.00 0.00 3.08
77 78 4.995058 TGGCCCTCCCCGAAACCT 62.995 66.667 0.00 0.00 0.00 3.50
78 79 4.735358 GTGGCCCTCCCCGAAACC 62.735 72.222 0.00 0.00 0.00 3.27
90 91 4.171103 ATCTAACCCCGCGTGGCC 62.171 66.667 7.81 0.00 0.00 5.36
91 92 2.895372 CATCTAACCCCGCGTGGC 60.895 66.667 7.81 0.00 0.00 5.01
92 93 1.078708 AACATCTAACCCCGCGTGG 60.079 57.895 5.91 5.91 0.00 4.94
93 94 0.390603 TCAACATCTAACCCCGCGTG 60.391 55.000 4.92 0.00 0.00 5.34
94 95 0.390735 GTCAACATCTAACCCCGCGT 60.391 55.000 4.92 0.00 0.00 6.01
95 96 1.087771 GGTCAACATCTAACCCCGCG 61.088 60.000 0.00 0.00 0.00 6.46
96 97 0.746923 GGGTCAACATCTAACCCCGC 60.747 60.000 0.00 0.00 45.87 6.13
97 98 3.471354 GGGTCAACATCTAACCCCG 57.529 57.895 0.00 0.00 45.87 5.73
100 101 2.871096 TGTGGGGTCAACATCTAACC 57.129 50.000 0.00 0.00 0.00 2.85
101 102 3.686016 ACATGTGGGGTCAACATCTAAC 58.314 45.455 0.00 0.00 0.00 2.34
102 103 3.329225 TGACATGTGGGGTCAACATCTAA 59.671 43.478 1.15 0.00 41.96 2.10
103 104 2.909662 TGACATGTGGGGTCAACATCTA 59.090 45.455 1.15 0.00 41.96 1.98
104 105 1.704628 TGACATGTGGGGTCAACATCT 59.295 47.619 1.15 0.00 41.96 2.90
105 106 2.198827 TGACATGTGGGGTCAACATC 57.801 50.000 1.15 0.00 41.96 3.06
111 112 3.914426 ACTCTTATGACATGTGGGGTC 57.086 47.619 1.15 0.00 35.83 4.46
112 113 5.975988 ATAACTCTTATGACATGTGGGGT 57.024 39.130 1.15 0.00 0.00 4.95
113 114 7.645058 AAAATAACTCTTATGACATGTGGGG 57.355 36.000 1.15 0.00 0.00 4.96
152 153 9.992442 TCATGGTAACCCAATTAATACCTAAAA 57.008 29.630 4.81 0.00 46.04 1.52
153 154 9.992442 TTCATGGTAACCCAATTAATACCTAAA 57.008 29.630 4.81 0.00 46.04 1.85
179 180 9.646522 GGATGGGGTATGCTTATGAATTTATAT 57.353 33.333 0.00 0.00 0.00 0.86
180 181 8.619281 TGGATGGGGTATGCTTATGAATTTATA 58.381 33.333 0.00 0.00 0.00 0.98
181 182 7.477864 TGGATGGGGTATGCTTATGAATTTAT 58.522 34.615 0.00 0.00 0.00 1.40
182 183 6.857848 TGGATGGGGTATGCTTATGAATTTA 58.142 36.000 0.00 0.00 0.00 1.40
183 184 5.714863 TGGATGGGGTATGCTTATGAATTT 58.285 37.500 0.00 0.00 0.00 1.82
184 185 5.337956 TGGATGGGGTATGCTTATGAATT 57.662 39.130 0.00 0.00 0.00 2.17
185 186 5.541258 ATGGATGGGGTATGCTTATGAAT 57.459 39.130 0.00 0.00 0.00 2.57
186 187 5.551583 ACTATGGATGGGGTATGCTTATGAA 59.448 40.000 0.00 0.00 0.00 2.57
187 188 5.100811 ACTATGGATGGGGTATGCTTATGA 58.899 41.667 0.00 0.00 0.00 2.15
188 189 5.441718 ACTATGGATGGGGTATGCTTATG 57.558 43.478 0.00 0.00 0.00 1.90
189 190 6.468972 AAACTATGGATGGGGTATGCTTAT 57.531 37.500 0.00 0.00 0.00 1.73
190 191 5.922960 AAACTATGGATGGGGTATGCTTA 57.077 39.130 0.00 0.00 0.00 3.09
191 192 4.814224 AAACTATGGATGGGGTATGCTT 57.186 40.909 0.00 0.00 0.00 3.91
192 193 4.814224 AAAACTATGGATGGGGTATGCT 57.186 40.909 0.00 0.00 0.00 3.79
212 213 2.747989 TGTGTCTGTGCCGTGTTAAAAA 59.252 40.909 0.00 0.00 0.00 1.94
213 214 2.357075 TGTGTCTGTGCCGTGTTAAAA 58.643 42.857 0.00 0.00 0.00 1.52
214 215 2.025589 TGTGTCTGTGCCGTGTTAAA 57.974 45.000 0.00 0.00 0.00 1.52
215 216 1.937223 CTTGTGTCTGTGCCGTGTTAA 59.063 47.619 0.00 0.00 0.00 2.01
216 217 1.577468 CTTGTGTCTGTGCCGTGTTA 58.423 50.000 0.00 0.00 0.00 2.41
217 218 1.714899 GCTTGTGTCTGTGCCGTGTT 61.715 55.000 0.00 0.00 0.00 3.32
218 219 2.180204 GCTTGTGTCTGTGCCGTGT 61.180 57.895 0.00 0.00 0.00 4.49
219 220 2.633657 GCTTGTGTCTGTGCCGTG 59.366 61.111 0.00 0.00 0.00 4.94
220 221 2.967076 CGCTTGTGTCTGTGCCGT 60.967 61.111 0.00 0.00 0.00 5.68
221 222 4.374702 GCGCTTGTGTCTGTGCCG 62.375 66.667 0.00 0.00 34.05 5.69
222 223 2.959357 GAGCGCTTGTGTCTGTGCC 61.959 63.158 13.26 0.00 40.18 5.01
223 224 1.572085 ATGAGCGCTTGTGTCTGTGC 61.572 55.000 13.26 0.00 39.68 4.57
224 225 1.391485 GTATGAGCGCTTGTGTCTGTG 59.609 52.381 13.26 0.00 0.00 3.66
225 226 1.000843 TGTATGAGCGCTTGTGTCTGT 59.999 47.619 13.26 0.00 0.00 3.41
226 227 1.713597 TGTATGAGCGCTTGTGTCTG 58.286 50.000 13.26 0.00 0.00 3.51
227 228 2.680312 ATGTATGAGCGCTTGTGTCT 57.320 45.000 13.26 0.00 0.00 3.41
228 229 2.216488 CGTATGTATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
229 230 2.193447 CGTATGTATGAGCGCTTGTGT 58.807 47.619 13.26 0.12 0.00 3.72
230 231 1.071239 GCGTATGTATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
231 232 1.209128 GCGTATGTATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
232 233 0.159554 CGCGTATGTATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
233 234 2.506544 CGCGTATGTATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
234 235 4.228451 CGCGTATGTATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
237 238 2.090658 GTGTATGCGCGTATGTATGAGC 59.909 50.000 20.45 0.00 38.31 4.26
238 239 2.338520 CGTGTATGCGCGTATGTATGAG 59.661 50.000 20.45 2.70 42.94 2.90
239 240 2.312348 CGTGTATGCGCGTATGTATGA 58.688 47.619 20.45 0.00 42.94 2.15
240 241 2.744094 CGTGTATGCGCGTATGTATG 57.256 50.000 20.45 9.76 42.94 2.39
250 251 2.933769 TCATAGAGATGCGTGTATGCG 58.066 47.619 0.00 0.00 37.81 4.73
251 252 4.051237 TGTTCATAGAGATGCGTGTATGC 58.949 43.478 0.00 0.00 32.62 3.14
252 253 5.043248 TGTGTTCATAGAGATGCGTGTATG 58.957 41.667 0.00 0.00 32.62 2.39
253 254 5.262588 TGTGTTCATAGAGATGCGTGTAT 57.737 39.130 0.00 0.00 32.62 2.29
254 255 4.712122 TGTGTTCATAGAGATGCGTGTA 57.288 40.909 0.00 0.00 32.62 2.90
255 256 3.592898 TGTGTTCATAGAGATGCGTGT 57.407 42.857 0.00 0.00 32.62 4.49
256 257 3.679502 TGTTGTGTTCATAGAGATGCGTG 59.320 43.478 0.00 0.00 32.62 5.34
257 258 3.679980 GTGTTGTGTTCATAGAGATGCGT 59.320 43.478 0.00 0.00 32.62 5.24
258 259 3.241773 CGTGTTGTGTTCATAGAGATGCG 60.242 47.826 0.00 0.00 32.62 4.73
259 260 3.484229 GCGTGTTGTGTTCATAGAGATGC 60.484 47.826 0.00 0.00 32.62 3.91
260 261 3.679502 TGCGTGTTGTGTTCATAGAGATG 59.320 43.478 0.00 0.00 0.00 2.90
261 262 3.679980 GTGCGTGTTGTGTTCATAGAGAT 59.320 43.478 0.00 0.00 0.00 2.75
262 263 3.057019 GTGCGTGTTGTGTTCATAGAGA 58.943 45.455 0.00 0.00 0.00 3.10
263 264 2.799978 TGTGCGTGTTGTGTTCATAGAG 59.200 45.455 0.00 0.00 0.00 2.43
264 265 2.542178 GTGTGCGTGTTGTGTTCATAGA 59.458 45.455 0.00 0.00 0.00 1.98
265 266 2.349438 GGTGTGCGTGTTGTGTTCATAG 60.349 50.000 0.00 0.00 0.00 2.23
266 267 1.600013 GGTGTGCGTGTTGTGTTCATA 59.400 47.619 0.00 0.00 0.00 2.15
267 268 0.380378 GGTGTGCGTGTTGTGTTCAT 59.620 50.000 0.00 0.00 0.00 2.57
268 269 1.649390 GGGTGTGCGTGTTGTGTTCA 61.649 55.000 0.00 0.00 0.00 3.18
269 270 1.063488 GGGTGTGCGTGTTGTGTTC 59.937 57.895 0.00 0.00 0.00 3.18
270 271 0.107606 TAGGGTGTGCGTGTTGTGTT 60.108 50.000 0.00 0.00 0.00 3.32
271 272 0.812412 GTAGGGTGTGCGTGTTGTGT 60.812 55.000 0.00 0.00 0.00 3.72
272 273 1.503818 GGTAGGGTGTGCGTGTTGTG 61.504 60.000 0.00 0.00 0.00 3.33
273 274 1.227734 GGTAGGGTGTGCGTGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
274 275 1.964373 GGGTAGGGTGTGCGTGTTG 60.964 63.158 0.00 0.00 0.00 3.33
275 276 2.428622 GGGTAGGGTGTGCGTGTT 59.571 61.111 0.00 0.00 0.00 3.32
276 277 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
277 278 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
278 279 0.262580 TATAGGGGTAGGGTGTGCGT 59.737 55.000 0.00 0.00 0.00 5.24
279 280 1.343465 CTTATAGGGGTAGGGTGTGCG 59.657 57.143 0.00 0.00 0.00 5.34
280 281 1.071857 GCTTATAGGGGTAGGGTGTGC 59.928 57.143 0.00 0.00 0.00 4.57
281 282 2.368875 CTGCTTATAGGGGTAGGGTGTG 59.631 54.545 0.00 0.00 0.00 3.82
282 283 2.022330 ACTGCTTATAGGGGTAGGGTGT 60.022 50.000 0.00 0.00 0.00 4.16
283 284 2.690840 ACTGCTTATAGGGGTAGGGTG 58.309 52.381 0.00 0.00 0.00 4.61
284 285 3.433088 AACTGCTTATAGGGGTAGGGT 57.567 47.619 0.00 0.00 0.00 4.34
285 286 3.244112 CGAAACTGCTTATAGGGGTAGGG 60.244 52.174 0.00 0.00 0.00 3.53
286 287 3.640029 TCGAAACTGCTTATAGGGGTAGG 59.360 47.826 0.00 0.00 0.00 3.18
287 288 4.583489 TCTCGAAACTGCTTATAGGGGTAG 59.417 45.833 0.00 0.00 0.00 3.18
288 289 4.539726 TCTCGAAACTGCTTATAGGGGTA 58.460 43.478 0.00 0.00 0.00 3.69
289 290 3.371965 TCTCGAAACTGCTTATAGGGGT 58.628 45.455 0.00 0.00 0.00 4.95
290 291 3.637229 TCTCTCGAAACTGCTTATAGGGG 59.363 47.826 0.00 0.00 0.00 4.79
291 292 4.339814 AGTCTCTCGAAACTGCTTATAGGG 59.660 45.833 0.00 0.00 0.00 3.53
292 293 5.066634 TCAGTCTCTCGAAACTGCTTATAGG 59.933 44.000 14.34 0.00 42.10 2.57
293 294 6.125327 TCAGTCTCTCGAAACTGCTTATAG 57.875 41.667 14.34 0.00 42.10 1.31
294 295 5.449314 GCTCAGTCTCTCGAAACTGCTTATA 60.449 44.000 14.34 1.03 42.10 0.98
295 296 4.676723 GCTCAGTCTCTCGAAACTGCTTAT 60.677 45.833 14.34 0.00 42.10 1.73
296 297 3.366476 GCTCAGTCTCTCGAAACTGCTTA 60.366 47.826 14.34 1.58 42.10 3.09
297 298 2.609244 GCTCAGTCTCTCGAAACTGCTT 60.609 50.000 14.34 0.00 42.10 3.91
298 299 1.067915 GCTCAGTCTCTCGAAACTGCT 60.068 52.381 14.34 0.00 42.10 4.24
299 300 1.067915 AGCTCAGTCTCTCGAAACTGC 60.068 52.381 14.34 6.84 42.10 4.40
300 301 2.227626 TCAGCTCAGTCTCTCGAAACTG 59.772 50.000 13.40 13.40 43.41 3.16
301 302 2.227865 GTCAGCTCAGTCTCTCGAAACT 59.772 50.000 0.00 0.00 0.00 2.66
302 303 2.030717 TGTCAGCTCAGTCTCTCGAAAC 60.031 50.000 0.00 0.00 0.00 2.78
303 304 2.230660 TGTCAGCTCAGTCTCTCGAAA 58.769 47.619 0.00 0.00 0.00 3.46
304 305 1.897560 TGTCAGCTCAGTCTCTCGAA 58.102 50.000 0.00 0.00 0.00 3.71
305 306 2.121291 ATGTCAGCTCAGTCTCTCGA 57.879 50.000 0.00 0.00 0.00 4.04
306 307 3.563390 TGATATGTCAGCTCAGTCTCTCG 59.437 47.826 0.00 0.00 0.00 4.04
307 308 5.710513 ATGATATGTCAGCTCAGTCTCTC 57.289 43.478 0.00 0.00 37.87 3.20
308 309 6.482898 AAATGATATGTCAGCTCAGTCTCT 57.517 37.500 0.00 0.00 37.87 3.10
309 310 6.760298 TCAAAATGATATGTCAGCTCAGTCTC 59.240 38.462 0.00 0.00 37.87 3.36
310 311 6.647229 TCAAAATGATATGTCAGCTCAGTCT 58.353 36.000 0.00 0.00 37.87 3.24
311 312 6.760298 TCTCAAAATGATATGTCAGCTCAGTC 59.240 38.462 0.00 0.00 37.87 3.51
312 313 6.647229 TCTCAAAATGATATGTCAGCTCAGT 58.353 36.000 0.00 0.00 37.87 3.41
313 314 7.731882 ATCTCAAAATGATATGTCAGCTCAG 57.268 36.000 0.00 0.00 37.87 3.35
314 315 8.515695 AAATCTCAAAATGATATGTCAGCTCA 57.484 30.769 0.00 0.00 37.87 4.26
315 316 9.875675 GTAAATCTCAAAATGATATGTCAGCTC 57.124 33.333 0.00 0.00 37.87 4.09
316 317 8.554528 CGTAAATCTCAAAATGATATGTCAGCT 58.445 33.333 0.00 0.00 37.87 4.24
317 318 8.551205 TCGTAAATCTCAAAATGATATGTCAGC 58.449 33.333 0.00 0.00 37.87 4.26
324 325 8.879759 GGTGACTTCGTAAATCTCAAAATGATA 58.120 33.333 0.00 0.00 0.00 2.15
325 326 7.413000 CGGTGACTTCGTAAATCTCAAAATGAT 60.413 37.037 0.00 0.00 0.00 2.45
326 327 6.128661 CGGTGACTTCGTAAATCTCAAAATGA 60.129 38.462 0.00 0.00 0.00 2.57
327 328 6.015504 CGGTGACTTCGTAAATCTCAAAATG 58.984 40.000 0.00 0.00 0.00 2.32
328 329 5.699458 ACGGTGACTTCGTAAATCTCAAAAT 59.301 36.000 0.00 0.00 39.22 1.82
329 330 5.051816 ACGGTGACTTCGTAAATCTCAAAA 58.948 37.500 0.00 0.00 39.22 2.44
330 331 4.624015 ACGGTGACTTCGTAAATCTCAAA 58.376 39.130 0.00 0.00 39.22 2.69
331 332 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
332 333 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
333 334 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
334 335 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
335 336 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
336 337 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
337 338 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
338 339 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
339 340 0.955428 ACGCCTACGGTGACTTCGTA 60.955 55.000 0.00 0.00 46.04 3.43
340 341 2.192608 GACGCCTACGGTGACTTCGT 62.193 60.000 0.00 0.00 46.04 3.85
341 342 1.513586 GACGCCTACGGTGACTTCG 60.514 63.158 0.00 0.00 46.04 3.79
342 343 0.179169 GAGACGCCTACGGTGACTTC 60.179 60.000 0.00 0.00 46.04 3.01
343 344 1.881602 GAGACGCCTACGGTGACTT 59.118 57.895 0.00 0.00 46.04 3.01
344 345 2.396955 CGAGACGCCTACGGTGACT 61.397 63.158 0.00 0.00 46.04 3.41
345 346 2.099831 CGAGACGCCTACGGTGAC 59.900 66.667 0.00 0.00 46.04 3.67
346 347 2.359107 ACGAGACGCCTACGGTGA 60.359 61.111 0.00 0.00 46.04 4.02
347 348 2.099831 GACGAGACGCCTACGGTG 59.900 66.667 0.00 0.00 46.04 4.94
348 349 3.494336 CGACGAGACGCCTACGGT 61.494 66.667 0.00 0.00 46.04 4.83
349 350 3.431683 GACGACGAGACGCCTACGG 62.432 68.421 0.00 0.00 46.04 4.02
350 351 3.747514 CGACGACGAGACGCCTACG 62.748 68.421 0.00 0.00 43.40 3.51
351 352 2.021106 CGACGACGAGACGCCTAC 59.979 66.667 0.00 0.00 42.66 3.18
352 353 2.125952 TCGACGACGAGACGCCTA 60.126 61.111 5.75 0.00 43.81 3.93
362 363 0.383491 TGTTCGTTCTCGTCGACGAC 60.383 55.000 34.97 24.63 46.61 4.34
364 365 1.325904 GGTGTTCGTTCTCGTCGACG 61.326 60.000 31.30 31.30 40.43 5.12
365 366 0.317269 TGGTGTTCGTTCTCGTCGAC 60.317 55.000 5.18 5.18 37.05 4.20
366 367 0.040692 CTGGTGTTCGTTCTCGTCGA 60.041 55.000 0.00 0.00 38.33 4.20
367 368 1.002250 CCTGGTGTTCGTTCTCGTCG 61.002 60.000 0.00 0.00 38.33 5.12
368 369 0.313043 TCCTGGTGTTCGTTCTCGTC 59.687 55.000 0.00 0.00 38.33 4.20
369 370 0.031721 GTCCTGGTGTTCGTTCTCGT 59.968 55.000 0.00 0.00 38.33 4.18
370 371 0.314302 AGTCCTGGTGTTCGTTCTCG 59.686 55.000 0.00 0.00 38.55 4.04
371 372 2.135933 CAAGTCCTGGTGTTCGTTCTC 58.864 52.381 0.00 0.00 0.00 2.87
372 373 1.760613 TCAAGTCCTGGTGTTCGTTCT 59.239 47.619 0.00 0.00 0.00 3.01
373 374 2.234300 TCAAGTCCTGGTGTTCGTTC 57.766 50.000 0.00 0.00 0.00 3.95
374 375 2.285977 GTTCAAGTCCTGGTGTTCGTT 58.714 47.619 0.00 0.00 0.00 3.85
375 376 1.474498 GGTTCAAGTCCTGGTGTTCGT 60.474 52.381 0.00 0.00 0.00 3.85
376 377 1.226746 GGTTCAAGTCCTGGTGTTCG 58.773 55.000 0.00 0.00 0.00 3.95
377 378 1.143073 AGGGTTCAAGTCCTGGTGTTC 59.857 52.381 0.00 0.00 31.11 3.18
397 398 1.052124 GTGGTATCCCCGACCCATCA 61.052 60.000 0.00 0.00 35.99 3.07
398 399 0.763223 AGTGGTATCCCCGACCCATC 60.763 60.000 0.00 0.00 35.99 3.51
404 405 4.368003 GGACAGTGGTATCCCCGA 57.632 61.111 0.00 0.00 35.15 5.14
409 410 3.371965 TGGTTAGAGGGACAGTGGTATC 58.628 50.000 0.00 0.00 0.00 2.24
416 417 2.092914 GGTTGGATGGTTAGAGGGACAG 60.093 54.545 0.00 0.00 0.00 3.51
418 419 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
442 443 1.185315 CATGGATGGGGTGAACCAAC 58.815 55.000 1.16 0.00 45.13 3.77
445 446 2.459555 AATCATGGATGGGGTGAACC 57.540 50.000 0.00 0.00 39.11 3.62
446 447 3.679639 GCAAAATCATGGATGGGGTGAAC 60.680 47.826 0.00 0.00 0.00 3.18
448 449 2.109774 GCAAAATCATGGATGGGGTGA 58.890 47.619 0.00 0.00 0.00 4.02
449 450 1.832366 TGCAAAATCATGGATGGGGTG 59.168 47.619 0.00 0.00 0.00 4.61
450 451 2.112998 CTGCAAAATCATGGATGGGGT 58.887 47.619 0.00 0.00 0.00 4.95
451 452 1.414919 CCTGCAAAATCATGGATGGGG 59.585 52.381 0.00 0.00 0.00 4.96
453 454 4.878439 CATACCTGCAAAATCATGGATGG 58.122 43.478 0.00 0.00 0.00 3.51
468 473 0.104304 GGTACTCCCACGCATACCTG 59.896 60.000 0.00 0.00 35.23 4.00
512 517 4.014406 GTCCGTGGATATTGGTTTTTCCT 58.986 43.478 0.00 0.00 37.07 3.36
518 523 5.719173 CAAATTTGTCCGTGGATATTGGTT 58.281 37.500 10.15 0.00 0.00 3.67
519 524 4.381505 GCAAATTTGTCCGTGGATATTGGT 60.382 41.667 19.03 0.00 0.00 3.67
528 533 3.077229 TGAACAGCAAATTTGTCCGTG 57.923 42.857 19.03 13.32 0.00 4.94
530 535 5.295431 TCTATGAACAGCAAATTTGTCCG 57.705 39.130 19.03 10.34 0.00 4.79
581 586 5.305902 GTCCCAACCCAAAAAGAAAAGGATA 59.694 40.000 0.00 0.00 0.00 2.59
584 589 3.198853 TGTCCCAACCCAAAAAGAAAAGG 59.801 43.478 0.00 0.00 0.00 3.11
586 591 4.041691 TGTTGTCCCAACCCAAAAAGAAAA 59.958 37.500 4.78 0.00 0.00 2.29
597 602 4.281898 ACAGTACTATGTTGTCCCAACC 57.718 45.455 0.00 0.00 0.00 3.77
615 620 4.987408 TGTCCCATGCAAAATCATACAG 57.013 40.909 0.00 0.00 0.00 2.74
616 621 4.710865 ACATGTCCCATGCAAAATCATACA 59.289 37.500 4.19 0.00 0.00 2.29
617 622 5.266733 ACATGTCCCATGCAAAATCATAC 57.733 39.130 4.19 0.00 0.00 2.39
618 623 5.187381 ACAACATGTCCCATGCAAAATCATA 59.813 36.000 0.00 0.00 0.00 2.15
619 624 4.020039 ACAACATGTCCCATGCAAAATCAT 60.020 37.500 0.00 0.00 0.00 2.45
631 636 4.911514 AGTACACAAAACAACATGTCCC 57.088 40.909 0.00 0.00 0.00 4.46
641 646 5.535333 TCTGCTGGTAGTAGTACACAAAAC 58.465 41.667 9.89 0.00 0.00 2.43
724 1294 1.655325 CGGCGTATTTCCGTATTTGCG 60.655 52.381 0.00 0.00 41.85 4.85
857 1427 1.264749 TGAGGTGGAGGAACGGGATG 61.265 60.000 0.00 0.00 0.00 3.51
1108 1686 4.748798 CCAGGGAGCCAGGGAGGT 62.749 72.222 0.00 0.00 40.61 3.85
1150 1728 0.902531 ACCGGAATCAACGATCCTGT 59.097 50.000 9.46 0.00 0.00 4.00
1187 1767 4.453136 CACCCTTCTAGCGATCTACTACTC 59.547 50.000 0.00 0.00 0.00 2.59
1188 1768 4.141436 ACACCCTTCTAGCGATCTACTACT 60.141 45.833 0.00 0.00 0.00 2.57
1189 1769 4.136051 ACACCCTTCTAGCGATCTACTAC 58.864 47.826 0.00 0.00 0.00 2.73
1190 1770 4.141551 TGACACCCTTCTAGCGATCTACTA 60.142 45.833 0.00 0.00 0.00 1.82
1191 1771 3.215975 GACACCCTTCTAGCGATCTACT 58.784 50.000 0.00 0.00 0.00 2.57
1192 1772 2.950309 TGACACCCTTCTAGCGATCTAC 59.050 50.000 0.00 0.00 0.00 2.59
1211 1791 4.265904 TCGAAATTCACAAGCTACCTGA 57.734 40.909 0.00 0.00 0.00 3.86
1238 1818 3.609103 ATTTCACTTGTCACTCAACGC 57.391 42.857 0.00 0.00 32.18 4.84
1239 1819 5.200454 CAGAATTTCACTTGTCACTCAACG 58.800 41.667 0.00 0.00 32.18 4.10
1240 1820 4.972440 GCAGAATTTCACTTGTCACTCAAC 59.028 41.667 0.00 0.00 32.18 3.18
1241 1821 4.260743 CGCAGAATTTCACTTGTCACTCAA 60.261 41.667 0.00 0.00 34.61 3.02
1289 1870 1.696097 AACGAGCCAACCACCAGAGT 61.696 55.000 0.00 0.00 0.00 3.24
1292 1873 2.908073 GCAACGAGCCAACCACCAG 61.908 63.158 0.00 0.00 37.23 4.00
1363 1957 6.991485 AACTACGAGTTCAAAATGCAAATG 57.009 33.333 0.00 0.00 31.77 2.32
1404 2485 4.385358 TTTTTCTTGTCCAAAGTGCCTC 57.615 40.909 0.00 0.00 0.00 4.70
1405 2486 5.118286 CAATTTTTCTTGTCCAAAGTGCCT 58.882 37.500 0.00 0.00 0.00 4.75
1406 2487 4.260743 GCAATTTTTCTTGTCCAAAGTGCC 60.261 41.667 5.26 0.00 42.70 5.01
1407 2488 4.571984 AGCAATTTTTCTTGTCCAAAGTGC 59.428 37.500 7.93 7.93 46.62 4.40
1408 2489 5.502869 GCAGCAATTTTTCTTGTCCAAAGTG 60.503 40.000 0.00 0.00 0.00 3.16
1409 2490 4.571984 GCAGCAATTTTTCTTGTCCAAAGT 59.428 37.500 0.00 0.00 0.00 2.66
1410 2491 4.571580 TGCAGCAATTTTTCTTGTCCAAAG 59.428 37.500 0.00 0.00 0.00 2.77
1411 2492 4.511527 TGCAGCAATTTTTCTTGTCCAAA 58.488 34.783 0.00 0.00 0.00 3.28
1454 2538 2.271944 AACTACTGTCAAAGCCCACC 57.728 50.000 0.00 0.00 0.00 4.61
1517 2603 4.473477 ACTATTTCGAAGTTAGCTGGCT 57.527 40.909 13.97 0.00 0.00 4.75
1518 2604 5.006455 GGTTACTATTTCGAAGTTAGCTGGC 59.994 44.000 13.97 0.00 0.00 4.85
1530 2628 3.103738 CAGTCCGACGGTTACTATTTCG 58.896 50.000 14.79 0.00 0.00 3.46
1602 2700 4.663636 AATAACTTCTGCCGTTCTTTCG 57.336 40.909 0.00 0.00 0.00 3.46
1651 2750 5.164606 TGACTTACACTTTCCGCTTTTTC 57.835 39.130 0.00 0.00 0.00 2.29
1665 2764 0.321298 GGCCTTCCGCTTGACTTACA 60.321 55.000 0.00 0.00 37.74 2.41
1671 2770 2.032528 CTGTGGCCTTCCGCTTGA 59.967 61.111 3.32 0.00 43.26 3.02
1672 2771 3.741476 GCTGTGGCCTTCCGCTTG 61.741 66.667 3.32 0.00 43.26 4.01
1921 3031 2.226962 ATTCTGGCACAATTCAGGCT 57.773 45.000 0.00 0.00 38.70 4.58
1925 3035 5.508567 TCCTTCATATTCTGGCACAATTCA 58.491 37.500 0.00 0.00 38.70 2.57
1931 3041 7.573968 AACTATTTCCTTCATATTCTGGCAC 57.426 36.000 0.00 0.00 0.00 5.01
1989 3099 0.915904 CTTGCGCAATAACGGCAATG 59.084 50.000 25.26 3.58 44.71 2.82
2066 3176 3.056322 CCTAAGCGGTATATTAAGCGGGT 60.056 47.826 0.00 0.00 40.57 5.28
2067 3177 3.518590 CCTAAGCGGTATATTAAGCGGG 58.481 50.000 0.00 0.00 40.57 6.13
2068 3178 3.518590 CCCTAAGCGGTATATTAAGCGG 58.481 50.000 0.00 0.00 40.57 5.52
2113 3223 2.370849 AGCGGGTTTTTAAGGACTGAGA 59.629 45.455 0.00 0.00 0.00 3.27
2119 3229 6.482973 CGGTATATTAAGCGGGTTTTTAAGGA 59.517 38.462 0.00 0.00 36.75 3.36
2120 3230 6.661669 CGGTATATTAAGCGGGTTTTTAAGG 58.338 40.000 0.00 0.00 36.75 2.69
2126 3236 3.480505 AGCGGTATATTAAGCGGGTTT 57.519 42.857 0.00 0.00 40.57 3.27
2127 3237 3.480505 AAGCGGTATATTAAGCGGGTT 57.519 42.857 0.00 0.00 40.57 4.11
2130 3240 5.842327 CGTTTTTAAGCGGTATATTAAGCGG 59.158 40.000 0.00 0.00 40.57 5.52
2132 3242 6.424683 AGCGTTTTTAAGCGGTATATTAAGC 58.575 36.000 1.66 0.00 41.36 3.09
2133 3243 8.831000 AAAGCGTTTTTAAGCGGTATATTAAG 57.169 30.769 3.99 0.00 42.28 1.85
2134 3244 8.667463 AGAAAGCGTTTTTAAGCGGTATATTAA 58.333 29.630 0.00 0.00 42.28 1.40
2135 3245 8.200364 AGAAAGCGTTTTTAAGCGGTATATTA 57.800 30.769 0.00 0.00 42.28 0.98
2136 3246 7.080353 AGAAAGCGTTTTTAAGCGGTATATT 57.920 32.000 0.00 0.00 42.28 1.28
2137 3247 6.673154 AGAAAGCGTTTTTAAGCGGTATAT 57.327 33.333 0.00 0.00 42.28 0.86
2138 3248 6.147492 TCAAGAAAGCGTTTTTAAGCGGTATA 59.853 34.615 0.00 0.00 42.28 1.47
2139 3249 5.049267 TCAAGAAAGCGTTTTTAAGCGGTAT 60.049 36.000 0.00 0.00 42.28 2.73
2140 3250 4.272991 TCAAGAAAGCGTTTTTAAGCGGTA 59.727 37.500 0.00 0.00 42.28 4.02
2141 3251 3.065648 TCAAGAAAGCGTTTTTAAGCGGT 59.934 39.130 0.00 0.00 44.87 5.68
2142 3252 3.623863 TCAAGAAAGCGTTTTTAAGCGG 58.376 40.909 0.00 0.00 38.61 5.52
2229 3341 7.306213 ACATACATTAGTCGATTGTAGATCCG 58.694 38.462 0.00 0.00 29.70 4.18
2368 3480 2.286872 TGTGGCATTTTTGCAACAAGG 58.713 42.857 5.72 5.65 44.85 3.61
2403 3515 2.165641 ACCATTCGATCTGCGTCTAACA 59.834 45.455 0.00 0.00 41.80 2.41
2541 3665 9.349713 TGGTCTTGTTTTGTTTCTACTATCAAT 57.650 29.630 0.00 0.00 0.00 2.57
2585 3709 4.336433 GCACATACAGGATTACAGCACATT 59.664 41.667 0.00 0.00 0.00 2.71
2608 3732 1.011968 TCGCGACTCGAAAACCATGG 61.012 55.000 11.19 11.19 45.36 3.66
2609 3733 2.441023 TCGCGACTCGAAAACCATG 58.559 52.632 3.71 0.00 45.36 3.66
2610 3734 4.979204 TCGCGACTCGAAAACCAT 57.021 50.000 3.71 0.00 45.36 3.55
2620 3744 3.102985 CTCGGATGAGTCGCGACT 58.897 61.111 39.89 39.89 45.84 4.18
2629 3753 0.613260 CCCCAAAGTGACTCGGATGA 59.387 55.000 2.79 0.00 0.00 2.92
2630 3754 0.324943 ACCCCAAAGTGACTCGGATG 59.675 55.000 2.79 0.00 0.00 3.51
2631 3755 1.831736 CTACCCCAAAGTGACTCGGAT 59.168 52.381 2.79 0.00 0.00 4.18
2632 3756 1.263356 CTACCCCAAAGTGACTCGGA 58.737 55.000 2.79 0.00 0.00 4.55
2633 3757 0.391263 GCTACCCCAAAGTGACTCGG 60.391 60.000 0.00 0.00 0.00 4.63
2634 3758 0.736325 CGCTACCCCAAAGTGACTCG 60.736 60.000 0.00 0.00 0.00 4.18
2635 3759 0.606604 TCGCTACCCCAAAGTGACTC 59.393 55.000 0.00 0.00 0.00 3.36
2636 3760 0.320697 GTCGCTACCCCAAAGTGACT 59.679 55.000 9.02 0.00 46.28 3.41
2637 3761 2.836944 GTCGCTACCCCAAAGTGAC 58.163 57.895 1.49 1.49 44.52 3.67
2638 3762 0.606604 GAGTCGCTACCCCAAAGTGA 59.393 55.000 0.00 0.00 0.00 3.41
2639 3763 0.736325 CGAGTCGCTACCCCAAAGTG 60.736 60.000 0.00 0.00 0.00 3.16
2640 3764 1.590147 CGAGTCGCTACCCCAAAGT 59.410 57.895 0.00 0.00 0.00 2.66
2641 3765 1.153628 CCGAGTCGCTACCCCAAAG 60.154 63.158 7.12 0.00 0.00 2.77
2642 3766 1.186917 TTCCGAGTCGCTACCCCAAA 61.187 55.000 7.12 0.00 0.00 3.28
2643 3767 1.186917 TTTCCGAGTCGCTACCCCAA 61.187 55.000 7.12 0.00 0.00 4.12
2644 3768 1.186917 TTTTCCGAGTCGCTACCCCA 61.187 55.000 7.12 0.00 0.00 4.96
2645 3769 0.037046 TTTTTCCGAGTCGCTACCCC 60.037 55.000 7.12 0.00 0.00 4.95
2646 3770 1.337541 ACTTTTTCCGAGTCGCTACCC 60.338 52.381 7.12 0.00 0.00 3.69
2647 3771 1.991264 GACTTTTTCCGAGTCGCTACC 59.009 52.381 7.12 0.00 34.76 3.18
2656 3780 0.949105 GCAGGCTCGACTTTTTCCGA 60.949 55.000 0.00 0.00 0.00 4.55
2657 3781 1.227999 TGCAGGCTCGACTTTTTCCG 61.228 55.000 0.00 0.00 0.00 4.30
2658 3782 0.519077 CTGCAGGCTCGACTTTTTCC 59.481 55.000 5.57 0.00 0.00 3.13
2659 3783 0.110010 GCTGCAGGCTCGACTTTTTC 60.110 55.000 17.12 0.00 38.06 2.29
2660 3784 1.952263 GCTGCAGGCTCGACTTTTT 59.048 52.632 17.12 0.00 38.06 1.94
2661 3785 3.660621 GCTGCAGGCTCGACTTTT 58.339 55.556 17.12 0.00 38.06 2.27
2674 3798 1.964290 CTAGTCGCAACTGCAGCTGC 61.964 60.000 31.89 31.89 42.21 5.25
2675 3799 0.668706 ACTAGTCGCAACTGCAGCTG 60.669 55.000 15.27 13.95 42.21 4.24
2676 3800 0.389166 GACTAGTCGCAACTGCAGCT 60.389 55.000 15.27 0.00 42.21 4.24
2677 3801 1.678269 CGACTAGTCGCAACTGCAGC 61.678 60.000 30.44 0.00 46.50 5.25
2678 3802 2.353807 CGACTAGTCGCAACTGCAG 58.646 57.895 30.44 13.48 46.50 4.41
2679 3803 4.552278 CGACTAGTCGCAACTGCA 57.448 55.556 30.44 0.00 46.50 4.41
2705 3829 3.186001 TCAACTTAGTGTCGACTCGAGTC 59.814 47.826 31.46 31.46 41.47 3.36
2706 3830 3.136763 TCAACTTAGTGTCGACTCGAGT 58.863 45.455 20.18 20.18 36.23 4.18
2707 3831 3.186817 ACTCAACTTAGTGTCGACTCGAG 59.813 47.826 17.92 11.84 36.23 4.04
2708 3832 3.136763 ACTCAACTTAGTGTCGACTCGA 58.863 45.455 17.92 6.73 33.21 4.04
2709 3833 3.480894 GACTCAACTTAGTGTCGACTCG 58.519 50.000 17.92 3.38 33.21 4.18
2715 3839 6.526566 AAAATGTCGACTCAACTTAGTGTC 57.473 37.500 17.92 0.00 0.00 3.67
2716 3840 6.920569 AAAAATGTCGACTCAACTTAGTGT 57.079 33.333 17.92 0.00 0.00 3.55
2754 3878 4.531912 TTCGAGCCGCGCGACTAG 62.532 66.667 34.63 26.30 35.18 2.57
2755 3879 3.405592 ATTTCGAGCCGCGCGACTA 62.406 57.895 34.63 10.66 35.18 2.59
2756 3880 4.796231 ATTTCGAGCCGCGCGACT 62.796 61.111 34.63 28.28 35.18 4.18
2757 3881 4.267013 GATTTCGAGCCGCGCGAC 62.267 66.667 34.63 22.66 35.18 5.19
2760 3884 3.272334 ATGGATTTCGAGCCGCGC 61.272 61.111 0.00 0.00 40.61 6.86
2761 3885 2.628106 CATGGATTTCGAGCCGCG 59.372 61.111 0.00 0.00 42.69 6.46
2762 3886 0.531974 TACCATGGATTTCGAGCCGC 60.532 55.000 21.47 0.00 0.00 6.53
2763 3887 1.800586 CATACCATGGATTTCGAGCCG 59.199 52.381 21.47 0.00 0.00 5.52
2764 3888 2.549754 CACATACCATGGATTTCGAGCC 59.450 50.000 21.47 0.00 33.60 4.70
2765 3889 2.031682 GCACATACCATGGATTTCGAGC 60.032 50.000 21.47 9.51 33.60 5.03
2766 3890 3.249320 CAGCACATACCATGGATTTCGAG 59.751 47.826 21.47 2.91 33.60 4.04
2767 3891 3.118445 TCAGCACATACCATGGATTTCGA 60.118 43.478 21.47 1.26 33.60 3.71
2768 3892 3.205338 TCAGCACATACCATGGATTTCG 58.795 45.455 21.47 4.76 33.60 3.46
2769 3893 3.004106 GCTCAGCACATACCATGGATTTC 59.996 47.826 21.47 2.06 33.60 2.17
2770 3894 2.954318 GCTCAGCACATACCATGGATTT 59.046 45.455 21.47 0.00 33.60 2.17
2771 3895 2.579873 GCTCAGCACATACCATGGATT 58.420 47.619 21.47 1.40 33.60 3.01
2772 3896 1.202855 GGCTCAGCACATACCATGGAT 60.203 52.381 21.47 4.69 33.60 3.41
2773 3897 0.181114 GGCTCAGCACATACCATGGA 59.819 55.000 21.47 2.01 33.60 3.41
2774 3898 0.182061 AGGCTCAGCACATACCATGG 59.818 55.000 11.19 11.19 33.60 3.66
2775 3899 2.916702 TAGGCTCAGCACATACCATG 57.083 50.000 0.00 0.00 0.00 3.66
2776 3900 4.392940 GAAATAGGCTCAGCACATACCAT 58.607 43.478 0.00 0.00 0.00 3.55
2777 3901 3.741075 CGAAATAGGCTCAGCACATACCA 60.741 47.826 0.00 0.00 0.00 3.25
2778 3902 2.802816 CGAAATAGGCTCAGCACATACC 59.197 50.000 0.00 0.00 0.00 2.73
2779 3903 3.491267 GTCGAAATAGGCTCAGCACATAC 59.509 47.826 0.00 0.00 0.00 2.39
2780 3904 3.132111 TGTCGAAATAGGCTCAGCACATA 59.868 43.478 0.00 0.00 0.00 2.29
2781 3905 2.093500 TGTCGAAATAGGCTCAGCACAT 60.093 45.455 0.00 0.00 0.00 3.21
2782 3906 1.275010 TGTCGAAATAGGCTCAGCACA 59.725 47.619 0.00 0.00 0.00 4.57
2783 3907 2.010145 TGTCGAAATAGGCTCAGCAC 57.990 50.000 0.00 0.00 0.00 4.40
2784 3908 2.093500 ACATGTCGAAATAGGCTCAGCA 60.093 45.455 0.00 0.00 0.00 4.41
2785 3909 2.555199 ACATGTCGAAATAGGCTCAGC 58.445 47.619 0.00 0.00 0.00 4.26
2904 4031 6.930731 TGCATTACTCAACAGTAGTGTCATA 58.069 36.000 3.07 0.00 42.29 2.15
2905 4032 5.793817 TGCATTACTCAACAGTAGTGTCAT 58.206 37.500 3.07 0.00 42.29 3.06
2906 4033 5.208463 TGCATTACTCAACAGTAGTGTCA 57.792 39.130 3.07 0.00 42.29 3.58
2907 4034 5.389935 GCTTGCATTACTCAACAGTAGTGTC 60.390 44.000 3.07 0.00 42.29 3.67
2908 4035 4.452455 GCTTGCATTACTCAACAGTAGTGT 59.548 41.667 0.00 0.00 42.29 3.55
2909 4036 4.452114 TGCTTGCATTACTCAACAGTAGTG 59.548 41.667 0.00 0.00 42.87 2.74
2910 4037 4.641396 TGCTTGCATTACTCAACAGTAGT 58.359 39.130 0.00 0.00 36.43 2.73
2941 4070 5.047590 TCCTACGTTTATCAACAGAGCTTGA 60.048 40.000 0.00 0.00 34.65 3.02
2958 4087 8.795842 TTAAAATTTACATCCATGTCCTACGT 57.204 30.769 0.00 0.00 41.97 3.57
2987 4116 1.604604 AGGACATGGTGGAACAAACG 58.395 50.000 0.00 0.00 44.16 3.60
3022 4151 4.856487 TGTGCACAAAAGAAAGAAAGAACG 59.144 37.500 19.28 0.00 0.00 3.95
3023 4152 6.311200 ACATGTGCACAAAAGAAAGAAAGAAC 59.689 34.615 25.72 0.00 0.00 3.01
3024 4153 6.397272 ACATGTGCACAAAAGAAAGAAAGAA 58.603 32.000 25.72 0.00 0.00 2.52
3025 4154 5.964758 ACATGTGCACAAAAGAAAGAAAGA 58.035 33.333 25.72 0.00 0.00 2.52
3026 4155 7.935338 ATACATGTGCACAAAAGAAAGAAAG 57.065 32.000 25.72 4.69 0.00 2.62
3027 4156 8.715191 AAATACATGTGCACAAAAGAAAGAAA 57.285 26.923 25.72 0.00 0.00 2.52
3028 4157 9.979578 ATAAATACATGTGCACAAAAGAAAGAA 57.020 25.926 25.72 5.39 0.00 2.52
3029 4158 9.979578 AATAAATACATGTGCACAAAAGAAAGA 57.020 25.926 25.72 6.64 0.00 2.52
3035 4164 9.579768 GGTGATAATAAATACATGTGCACAAAA 57.420 29.630 25.72 12.57 0.00 2.44
3036 4165 8.965819 AGGTGATAATAAATACATGTGCACAAA 58.034 29.630 25.72 12.96 0.00 2.83
3037 4166 8.404765 CAGGTGATAATAAATACATGTGCACAA 58.595 33.333 25.72 8.09 0.00 3.33
3040 4169 7.228507 GTCCAGGTGATAATAAATACATGTGCA 59.771 37.037 9.11 0.00 0.00 4.57
3068 4197 2.223203 CGCTTTGGAATGATGAGACAGC 60.223 50.000 0.00 0.00 0.00 4.40
3157 4286 1.400494 AGCAAAATGAATACGCGGGAC 59.600 47.619 12.47 0.00 0.00 4.46
3194 4323 2.591923 TGTGCAACCAAATAAGCAGGA 58.408 42.857 0.00 0.00 37.72 3.86
3245 4374 3.251729 CCTGCATAGCCATACATGAACAC 59.748 47.826 0.00 0.00 0.00 3.32
3256 4385 2.225091 CCATATTTCCCCTGCATAGCCA 60.225 50.000 0.00 0.00 0.00 4.75
3582 4711 8.083462 TGAGTAGACAAATACACAAACATCAC 57.917 34.615 0.00 0.00 0.00 3.06
3733 4873 3.196469 TCACCAAACAAAGCCAAACATCA 59.804 39.130 0.00 0.00 0.00 3.07
3782 4922 5.185454 GTGATTCTGATGTACCATCACCAA 58.815 41.667 2.88 0.75 38.44 3.67
3844 4997 5.047802 ACACCATCTAGGCATTGAAAACTTG 60.048 40.000 0.00 0.00 43.14 3.16
3847 5000 4.458989 TCACACCATCTAGGCATTGAAAAC 59.541 41.667 0.00 0.00 43.14 2.43
3965 5131 1.419387 CCTAGCCCAATCCCTCTCTTG 59.581 57.143 0.00 0.00 0.00 3.02
4036 5202 8.200792 AGAATCTCTACATCGAATTAGCAACTT 58.799 33.333 0.00 0.00 0.00 2.66
4064 5231 9.392259 GGATGATGACATGATGTATACATTGAT 57.608 33.333 19.19 11.65 35.23 2.57
4069 5236 9.880157 CATAAGGATGATGACATGATGTATACA 57.120 33.333 8.27 8.27 36.82 2.29
4072 5239 7.769507 GCTCATAAGGATGATGACATGATGTAT 59.230 37.037 0.00 0.00 41.33 2.29
4073 5240 7.101700 GCTCATAAGGATGATGACATGATGTA 58.898 38.462 0.00 0.00 41.33 2.29
4074 5241 5.938710 GCTCATAAGGATGATGACATGATGT 59.061 40.000 0.00 0.00 41.33 3.06
4075 5242 5.938125 TGCTCATAAGGATGATGACATGATG 59.062 40.000 0.00 0.00 41.33 3.07
4076 5243 6.123045 TGCTCATAAGGATGATGACATGAT 57.877 37.500 0.00 0.00 41.33 2.45
4077 5244 5.556006 TGCTCATAAGGATGATGACATGA 57.444 39.130 0.00 0.00 41.33 3.07
4078 5245 6.819397 ATTGCTCATAAGGATGATGACATG 57.181 37.500 0.00 0.00 41.33 3.21
4079 5246 7.834881 AAATTGCTCATAAGGATGATGACAT 57.165 32.000 0.00 0.00 41.33 3.06
4080 5247 8.623903 GTTAAATTGCTCATAAGGATGATGACA 58.376 33.333 0.00 0.00 41.33 3.58
4081 5248 8.623903 TGTTAAATTGCTCATAAGGATGATGAC 58.376 33.333 0.00 0.00 41.33 3.06
4082 5249 8.750515 TGTTAAATTGCTCATAAGGATGATGA 57.249 30.769 0.00 0.00 41.33 2.92
4083 5250 9.406828 CATGTTAAATTGCTCATAAGGATGATG 57.593 33.333 0.00 0.00 41.33 3.07
4084 5251 9.139734 ACATGTTAAATTGCTCATAAGGATGAT 57.860 29.630 0.00 0.00 41.33 2.45
4085 5252 8.523915 ACATGTTAAATTGCTCATAAGGATGA 57.476 30.769 0.00 0.00 39.88 2.92
4086 5253 7.864379 GGACATGTTAAATTGCTCATAAGGATG 59.136 37.037 0.00 0.00 0.00 3.51
4087 5254 7.781693 AGGACATGTTAAATTGCTCATAAGGAT 59.218 33.333 0.00 0.00 0.00 3.24
4088 5255 7.118723 AGGACATGTTAAATTGCTCATAAGGA 58.881 34.615 0.00 0.00 0.00 3.36
4089 5256 7.338800 AGGACATGTTAAATTGCTCATAAGG 57.661 36.000 0.00 0.00 0.00 2.69
4091 5258 9.851686 AGATAGGACATGTTAAATTGCTCATAA 57.148 29.630 0.00 0.00 0.00 1.90
4092 5259 9.494271 GAGATAGGACATGTTAAATTGCTCATA 57.506 33.333 0.00 0.00 0.00 2.15
4282 5532 1.067295 ATGGTGGGAACTGAAGCAGA 58.933 50.000 0.82 0.00 35.18 4.26
4315 5566 3.825585 TGCCAGAGTCAATATTGCAAACA 59.174 39.130 10.76 0.00 0.00 2.83
4669 5938 1.142748 CAGCTGAAGCCTCCCTACG 59.857 63.158 8.42 0.00 43.38 3.51
4771 6041 7.862741 ATGAGATGCATTTAAAATGTATGCG 57.137 32.000 0.00 0.00 45.80 4.73
4803 6074 5.947228 ATGCTGGTACATGTACAATATGC 57.053 39.130 31.52 25.16 38.20 3.14
4839 6110 1.143813 CTGAGGGAAGTATGGGCCAT 58.856 55.000 24.69 24.69 0.00 4.40
4868 6161 9.932207 AATGACATGACATTAATGACAACAAAT 57.068 25.926 22.16 11.58 38.49 2.32
4899 6801 4.773323 ACTTCACTTGCTAAATGGAAGC 57.227 40.909 0.00 0.00 46.29 3.86
4991 6903 9.889128 AAATTGATGGTCCATAAAATACCTTTG 57.111 29.630 3.72 0.00 34.23 2.77
5028 6940 0.666577 GACACCGGAAACCTCAGACG 60.667 60.000 9.46 0.00 0.00 4.18
5074 6986 7.915508 TGCAGAAATGTAAGAAATATACACGG 58.084 34.615 0.00 0.00 36.19 4.94
5153 7065 3.118334 ACTTCAGATCAGGCATTCCAGAG 60.118 47.826 0.00 0.00 31.00 3.35
5243 7156 4.371786 TGTGTCAAGACTCAGTAAAGCAG 58.628 43.478 1.53 0.00 31.97 4.24
5276 7189 9.385902 GCAAAACAGTTATATATATGTGCACAG 57.614 33.333 25.84 9.12 0.00 3.66
5304 7217 5.708697 GGGTAGCCAGTAAACAATGTTAACT 59.291 40.000 5.96 0.00 0.00 2.24
5339 7252 6.610741 ATCAGGAGATCATTTACGAAAAGC 57.389 37.500 0.00 0.00 0.00 3.51
5600 7513 4.011023 ACCCTCCGTGATTCGATATCTAG 58.989 47.826 0.34 0.00 42.86 2.43
5737 7650 2.485426 AGATTCACCATGTCAGCAAACG 59.515 45.455 0.00 0.00 0.00 3.60
5827 7740 1.032014 TTGCTGTCTGCTTTGGAACC 58.968 50.000 3.20 0.00 43.37 3.62
5845 7758 5.357032 AGATGTTGTTTGGAAACTCGTCTTT 59.643 36.000 4.02 0.00 36.96 2.52
5956 7869 2.376109 AGACTACGACCCACATACTGG 58.624 52.381 0.00 0.00 40.26 4.00
5973 7886 5.023533 TCACACTATCAAGCCCATTAGAC 57.976 43.478 0.00 0.00 0.00 2.59
5975 7888 6.319658 ACAATTCACACTATCAAGCCCATTAG 59.680 38.462 0.00 0.00 0.00 1.73
5983 7896 7.966753 CCATTCTGAACAATTCACACTATCAAG 59.033 37.037 0.00 0.00 35.46 3.02
5989 7902 4.889409 ACACCATTCTGAACAATTCACACT 59.111 37.500 0.00 0.00 35.46 3.55
6017 7930 6.042666 GGCAGGGCATAATTTAGGGAAATTTA 59.957 38.462 1.32 0.00 41.53 1.40
6030 7943 1.143813 ACAGCTAGGCAGGGCATAAT 58.856 50.000 0.00 0.00 0.00 1.28
6073 7986 6.042666 GGCAGGGCATAATTTAGGGAAATTTA 59.957 38.462 1.32 0.00 41.53 1.40
6157 8070 0.686789 TGCAAGAGGTAGCTCAGCAA 59.313 50.000 28.44 17.44 35.07 3.91
6343 8256 6.980051 ACGAGATTAAATGTAACCTGGAAC 57.020 37.500 0.00 0.00 0.00 3.62
6413 8326 8.506437 TGCAGAACAGATAAATAAAACAGAGTG 58.494 33.333 0.00 0.00 0.00 3.51
6564 8478 4.980339 TTATATGCATGAAGGCTCCTCA 57.020 40.909 10.16 0.00 34.04 3.86
6615 8529 0.106268 TGCAGGAAGCCAGGAAACAA 60.106 50.000 0.00 0.00 44.83 2.83
6654 8576 0.762418 TCGGAACCTGCAGGAAAGAA 59.238 50.000 39.19 17.74 38.94 2.52
6690 8612 4.404299 CCTTGAGGAACCGAACACGTAAG 61.404 52.174 0.00 0.00 40.25 2.34
6738 8660 9.319143 TGGTTTTAGTACCAAACATTTTCAATG 57.681 29.630 16.31 0.00 44.97 2.82
6908 8830 6.705302 TCATGATGAGTACAAAAAGAGCTCT 58.295 36.000 11.45 11.45 0.00 4.09
6942 8864 3.351794 TGGGTCATAATTTACGTGCCA 57.648 42.857 0.00 0.00 0.00 4.92
6979 8901 2.456627 TCTGCCCTCTGCTGAAGTT 58.543 52.632 0.00 0.00 43.93 2.66
7152 9075 3.885297 ACACCCACTCAATGAGAAAACAG 59.115 43.478 18.20 4.76 33.32 3.16
7162 9085 1.812571 GCGATTTGACACCCACTCAAT 59.187 47.619 0.00 0.00 0.00 2.57
7167 9090 0.387239 GCAAGCGATTTGACACCCAC 60.387 55.000 4.50 0.00 39.21 4.61
7505 9429 4.918588 TGATTTTGGAAAGGAGGGAGTAC 58.081 43.478 0.00 0.00 0.00 2.73
7604 9556 2.167487 TGCCAAACTCCTTCCAAAACAC 59.833 45.455 0.00 0.00 0.00 3.32
7608 9560 1.039856 GCTGCCAAACTCCTTCCAAA 58.960 50.000 0.00 0.00 0.00 3.28
7699 9663 6.334378 TGGTGGAAAATGTATAGGATCCAA 57.666 37.500 15.82 0.00 38.58 3.53
7765 10219 7.797038 AACTAATGACAAAACTACTCCGTTT 57.203 32.000 0.00 0.00 38.66 3.60
7767 10221 7.496591 TCAAAACTAATGACAAAACTACTCCGT 59.503 33.333 0.00 0.00 0.00 4.69
7769 10223 9.665264 CTTCAAAACTAATGACAAAACTACTCC 57.335 33.333 0.00 0.00 0.00 3.85
7771 10225 8.630037 CCCTTCAAAACTAATGACAAAACTACT 58.370 33.333 0.00 0.00 0.00 2.57
7791 10245 5.010012 GCAAAAGAAGAAATGACTCCCTTCA 59.990 40.000 0.00 0.00 37.92 3.02
7817 10271 3.908103 ACATATTTACCCCTCCACGCTAT 59.092 43.478 0.00 0.00 0.00 2.97
7818 10272 3.311091 ACATATTTACCCCTCCACGCTA 58.689 45.455 0.00 0.00 0.00 4.26
7819 10273 2.124411 ACATATTTACCCCTCCACGCT 58.876 47.619 0.00 0.00 0.00 5.07
7820 10274 2.632987 ACATATTTACCCCTCCACGC 57.367 50.000 0.00 0.00 0.00 5.34
7821 10275 7.393841 TTTTAAACATATTTACCCCTCCACG 57.606 36.000 0.00 0.00 29.77 4.94



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.