Multiple sequence alignment - TraesCS6A01G263700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G263700 chr6A 100.000 3293 0 0 1 3293 486839786 486843078 0.000000e+00 6082.0
1 TraesCS6A01G263700 chr6A 88.065 310 34 2 2641 2949 359051265 359050958 6.720000e-97 364.0
2 TraesCS6A01G263700 chr6D 94.033 2145 80 21 508 2631 354993027 354990910 0.000000e+00 3208.0
3 TraesCS6A01G263700 chr6D 84.127 504 37 20 1 501 354993682 354993219 6.480000e-122 448.0
4 TraesCS6A01G263700 chr6B 93.016 2162 90 24 521 2636 523064283 523066429 0.000000e+00 3099.0
5 TraesCS6A01G263700 chr6B 82.629 426 45 13 2209 2631 523066980 523067379 1.880000e-92 350.0
6 TraesCS6A01G263700 chr6B 94.366 142 7 1 347 488 523063833 523063973 1.990000e-52 217.0
7 TraesCS6A01G263700 chr3A 88.925 307 29 4 2641 2945 22781800 22781497 1.120000e-99 374.0
8 TraesCS6A01G263700 chr3A 88.462 312 33 2 2641 2951 692964889 692964580 1.120000e-99 374.0
9 TraesCS6A01G263700 chr3A 86.957 92 10 1 96 185 293585543 293585634 5.810000e-18 102.0
10 TraesCS6A01G263700 chr3A 88.000 75 7 2 113 185 446570494 446570420 1.630000e-13 87.9
11 TraesCS6A01G263700 chr7A 88.065 310 34 2 2641 2949 345230036 345229729 6.720000e-97 364.0
12 TraesCS6A01G263700 chr7A 89.024 82 9 0 3062 3143 691146743 691146824 5.810000e-18 102.0
13 TraesCS6A01G263700 chr5B 87.821 312 35 2 2641 2951 90506867 90506558 2.420000e-96 363.0
14 TraesCS6A01G263700 chr4A 88.026 309 34 2 2641 2948 590230526 590230220 2.420000e-96 363.0
15 TraesCS6A01G263700 chr4A 87.781 311 32 5 2638 2945 614550974 614551281 3.120000e-95 359.0
16 TraesCS6A01G263700 chr1A 87.781 311 34 3 2641 2950 261368699 261368392 8.690000e-96 361.0
17 TraesCS6A01G263700 chr1A 87.147 319 37 3 2640 2956 282546226 282546542 3.120000e-95 359.0
18 TraesCS6A01G263700 chr1A 95.455 66 3 0 1 66 156431706 156431641 4.490000e-19 106.0
19 TraesCS6A01G263700 chr1A 84.270 89 11 3 103 189 405482977 405482890 2.110000e-12 84.2
20 TraesCS6A01G263700 chr2D 88.259 247 27 2 1006 1251 559311932 559311687 8.940000e-76 294.0
21 TraesCS6A01G263700 chr2D 84.884 86 10 2 103 186 592630996 592631080 2.110000e-12 84.2
22 TraesCS6A01G263700 chr2B 86.905 252 31 2 1007 1257 668378261 668378011 6.960000e-72 281.0
23 TraesCS6A01G263700 chr2A 86.454 251 30 4 1006 1254 699868895 699868647 4.190000e-69 272.0
24 TraesCS6A01G263700 chr2A 87.059 85 9 1 103 185 464165122 464165206 9.730000e-16 95.3
25 TraesCS6A01G263700 chr2A 86.047 86 10 1 103 186 674043539 674043454 1.260000e-14 91.6
26 TraesCS6A01G263700 chr7B 87.059 85 9 1 104 186 572400400 572400316 9.730000e-16 95.3
27 TraesCS6A01G263700 chr1D 85.882 85 10 1 103 185 269811328 269811244 4.530000e-14 89.8
28 TraesCS6A01G263700 chr3D 82.000 100 15 2 102 199 609775789 609775691 7.570000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G263700 chr6A 486839786 486843078 3292 False 6082 6082 100.000000 1 3293 1 chr6A.!!$F1 3292
1 TraesCS6A01G263700 chr6D 354990910 354993682 2772 True 1828 3208 89.080000 1 2631 2 chr6D.!!$R1 2630
2 TraesCS6A01G263700 chr6B 523063833 523067379 3546 False 1222 3099 90.003667 347 2636 3 chr6B.!!$F1 2289

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.179029 GGTGACATTATGGGACGGGG 60.179 60.0 0.00 0.0 0.0 5.73 F
895 1224 0.323360 ATTGCCGGCCTACATGTTGT 60.323 50.0 26.77 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1366 1707 1.300620 TCACCTTGAACGGCGTCTG 60.301 57.895 15.17 3.69 0.00 3.51 R
2530 3826 0.599558 CAGTGCAACAACCCATGAGG 59.400 55.000 0.00 0.00 41.43 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.064758 TGGCAGGTGACATTATGGGAC 60.065 52.381 0.00 0.00 0.00 4.46
25 26 1.299541 GCAGGTGACATTATGGGACG 58.700 55.000 0.00 0.00 0.00 4.79
26 27 1.953559 CAGGTGACATTATGGGACGG 58.046 55.000 0.00 0.00 0.00 4.79
27 28 0.837272 AGGTGACATTATGGGACGGG 59.163 55.000 0.00 0.00 0.00 5.28
28 29 0.179029 GGTGACATTATGGGACGGGG 60.179 60.000 0.00 0.00 0.00 5.73
32 33 1.420138 GACATTATGGGACGGGGTGAT 59.580 52.381 0.00 0.00 0.00 3.06
66 68 1.300971 AAGCATGCCGTGTGTAGCAG 61.301 55.000 15.66 0.00 43.38 4.24
67 69 2.034879 GCATGCCGTGTGTAGCAGT 61.035 57.895 6.36 0.00 43.38 4.40
77 80 2.226437 GTGTGTAGCAGTCCACATTTGG 59.774 50.000 0.00 0.00 42.95 3.28
95 98 1.988107 TGGATTCCTCTTGCACCTTCT 59.012 47.619 3.95 0.00 0.00 2.85
96 99 2.376518 TGGATTCCTCTTGCACCTTCTT 59.623 45.455 3.95 0.00 0.00 2.52
98 101 3.192212 GGATTCCTCTTGCACCTTCTTTG 59.808 47.826 0.00 0.00 0.00 2.77
106 109 4.574828 TCTTGCACCTTCTTTGTGTTACTC 59.425 41.667 0.00 0.00 36.11 2.59
129 132 9.955102 ACTCCCTTCGTAAAGAAATATAAAAGT 57.045 29.630 0.00 0.00 38.57 2.66
180 183 7.792032 ACAATCTCATATTTCTTTACCGAGGA 58.208 34.615 0.00 0.00 0.00 3.71
191 194 8.635765 TTTCTTTACCGAGGAAGTACTTACTA 57.364 34.615 20.61 1.90 32.95 1.82
209 212 7.445945 ACTTACTAGCAGAGAATTTTGAGTGT 58.554 34.615 0.00 0.00 0.00 3.55
213 216 4.322567 AGCAGAGAATTTTGAGTGTCTCC 58.677 43.478 0.00 0.00 37.77 3.71
214 217 3.438434 GCAGAGAATTTTGAGTGTCTCCC 59.562 47.826 0.00 0.00 37.77 4.30
235 238 5.773680 TCCCGAAATACAGAGGGTCTAATAG 59.226 44.000 0.00 0.00 44.13 1.73
247 250 8.040132 CAGAGGGTCTAATAGATCAATGAATCC 58.960 40.741 2.68 0.00 0.00 3.01
248 251 7.960861 AGAGGGTCTAATAGATCAATGAATCCT 59.039 37.037 2.68 0.00 0.00 3.24
250 253 9.796242 AGGGTCTAATAGATCAATGAATCCTAT 57.204 33.333 2.68 0.00 0.00 2.57
252 255 9.829507 GGTCTAATAGATCAATGAATCCTATGG 57.170 37.037 0.00 0.00 0.00 2.74
278 281 7.752695 ACTCGGTTTTTCATTAATTAGCTGAG 58.247 34.615 0.00 0.00 0.00 3.35
294 297 9.551734 AATTAGCTGAGCAATTTTCTTTTTCTT 57.448 25.926 7.39 0.00 0.00 2.52
298 301 9.551734 AGCTGAGCAATTTTCTTTTTCTTAATT 57.448 25.926 7.39 0.00 0.00 1.40
329 332 8.847444 ATTAATCGATGAGTCAAATCTTTTGC 57.153 30.769 0.00 0.00 0.00 3.68
332 335 6.317789 TCGATGAGTCAAATCTTTTGCTTT 57.682 33.333 0.00 0.00 0.00 3.51
333 336 6.373779 TCGATGAGTCAAATCTTTTGCTTTC 58.626 36.000 0.00 0.00 0.00 2.62
334 337 5.570589 CGATGAGTCAAATCTTTTGCTTTCC 59.429 40.000 0.00 0.00 0.00 3.13
378 382 2.887152 CAGTTTAGCCAGAGCCAAGTTT 59.113 45.455 0.00 0.00 41.25 2.66
638 923 0.777446 TCCCCTTGTTTTCTCCCTGG 59.223 55.000 0.00 0.00 0.00 4.45
644 929 3.511540 CCTTGTTTTCTCCCTGGAAATCC 59.488 47.826 0.00 0.00 35.51 3.01
668 953 1.797933 CGCGTCTCACGTTGAGGAG 60.798 63.158 12.89 5.01 44.39 3.69
675 960 1.203523 CTCACGTTGAGGAGAGGGAAG 59.796 57.143 7.01 0.00 40.71 3.46
680 965 1.258445 TTGAGGAGAGGGAAGACGCC 61.258 60.000 0.00 0.00 0.00 5.68
748 1033 4.152402 CCAAAACCAGTATGAACAGAGACG 59.848 45.833 0.00 0.00 39.69 4.18
782 1067 8.755028 ACCAGGGTTAACAATCCAATAAAATAC 58.245 33.333 8.10 0.00 32.57 1.89
783 1068 8.977412 CCAGGGTTAACAATCCAATAAAATACT 58.023 33.333 8.10 0.00 32.57 2.12
835 1132 3.539253 GCACTAATTGCCAGCATCG 57.461 52.632 0.00 0.00 46.63 3.84
836 1133 0.734889 GCACTAATTGCCAGCATCGT 59.265 50.000 0.00 0.00 46.63 3.73
837 1134 1.268234 GCACTAATTGCCAGCATCGTC 60.268 52.381 0.00 0.00 46.63 4.20
839 1136 2.286294 CACTAATTGCCAGCATCGTCTC 59.714 50.000 0.00 0.00 0.00 3.36
840 1137 2.169352 ACTAATTGCCAGCATCGTCTCT 59.831 45.455 0.00 0.00 0.00 3.10
841 1138 1.661341 AATTGCCAGCATCGTCTCTC 58.339 50.000 0.00 0.00 0.00 3.20
889 1186 1.748879 GCAGAATTGCCGGCCTACA 60.749 57.895 26.77 0.59 44.74 2.74
894 1223 0.817013 AATTGCCGGCCTACATGTTG 59.183 50.000 26.77 0.84 0.00 3.33
895 1224 0.323360 ATTGCCGGCCTACATGTTGT 60.323 50.000 26.77 0.00 0.00 3.32
896 1225 1.240641 TTGCCGGCCTACATGTTGTG 61.241 55.000 26.77 0.00 0.00 3.33
897 1226 2.406616 GCCGGCCTACATGTTGTGG 61.407 63.158 18.11 5.75 0.00 4.17
898 1227 1.002624 CCGGCCTACATGTTGTGGT 60.003 57.895 2.30 0.00 0.00 4.16
899 1228 0.608035 CCGGCCTACATGTTGTGGTT 60.608 55.000 2.30 0.00 0.00 3.67
900 1229 0.521291 CGGCCTACATGTTGTGGTTG 59.479 55.000 2.30 0.00 0.00 3.77
901 1230 1.616159 GGCCTACATGTTGTGGTTGT 58.384 50.000 2.30 0.00 0.00 3.32
902 1231 2.785562 GGCCTACATGTTGTGGTTGTA 58.214 47.619 2.30 0.00 0.00 2.41
903 1232 2.747446 GGCCTACATGTTGTGGTTGTAG 59.253 50.000 2.30 0.00 41.49 2.74
904 1233 3.408634 GCCTACATGTTGTGGTTGTAGT 58.591 45.455 2.30 0.00 40.66 2.73
905 1234 3.188460 GCCTACATGTTGTGGTTGTAGTG 59.812 47.826 2.30 2.57 40.66 2.74
945 1274 4.677378 CGCATCATTTCTACTCCTACTTCG 59.323 45.833 0.00 0.00 0.00 3.79
947 1276 5.460419 GCATCATTTCTACTCCTACTTCGTG 59.540 44.000 0.00 0.00 0.00 4.35
1254 1595 1.820481 CTCCTCCTCCTCGTCGTCC 60.820 68.421 0.00 0.00 0.00 4.79
1634 1975 3.402681 CCTGAGGCCCGTCATGGT 61.403 66.667 0.00 0.00 35.15 3.55
2100 2441 2.436646 CTCGTGTCCATGGTGGCC 60.437 66.667 12.58 0.00 37.47 5.36
2202 2543 0.934496 CGTCCACGAAGCAAAAGACA 59.066 50.000 0.00 0.00 43.02 3.41
2256 2597 1.378762 GCAGTACCCTTGCTTCCCA 59.621 57.895 0.00 0.00 38.51 4.37
2414 2756 9.831737 ATAATGTAACGACTATACGGATTGTAC 57.168 33.333 0.00 0.00 35.44 2.90
2465 2807 2.507058 ACAGCAAGAGCATCATTCCCTA 59.493 45.455 0.00 0.00 45.49 3.53
2469 2811 5.944599 CAGCAAGAGCATCATTCCCTATTAT 59.055 40.000 0.00 0.00 45.49 1.28
2474 2816 4.836825 AGCATCATTCCCTATTATGTCCG 58.163 43.478 0.00 0.00 0.00 4.79
2481 2823 8.025270 TCATTCCCTATTATGTCCGTCTTAAA 57.975 34.615 0.00 0.00 0.00 1.52
2492 3788 7.630242 ATGTCCGTCTTAAATTTCATGTGAT 57.370 32.000 0.00 0.00 0.00 3.06
2497 3793 9.613428 TCCGTCTTAAATTTCATGTGATATTCT 57.387 29.630 0.00 0.00 0.00 2.40
2527 3823 4.402155 TCTTCAAGAAATTGGCAGTTGTGT 59.598 37.500 0.00 0.00 0.00 3.72
2530 3826 3.733443 AGAAATTGGCAGTTGTGTTCC 57.267 42.857 0.00 0.00 0.00 3.62
2534 3830 0.257328 TTGGCAGTTGTGTTCCCTCA 59.743 50.000 0.00 0.00 0.00 3.86
2536 3832 0.883833 GGCAGTTGTGTTCCCTCATG 59.116 55.000 0.00 0.00 0.00 3.07
2551 3849 0.467844 TCATGGGTTGTTGCACTGCT 60.468 50.000 1.98 0.00 0.00 4.24
2552 3850 0.390124 CATGGGTTGTTGCACTGCTT 59.610 50.000 1.98 0.00 0.00 3.91
2556 3854 1.135689 GGGTTGTTGCACTGCTTATCG 60.136 52.381 1.98 0.00 0.00 2.92
2560 3858 3.251479 TGTTGCACTGCTTATCGATCT 57.749 42.857 0.00 0.00 0.00 2.75
2572 3870 7.933577 ACTGCTTATCGATCTCCAATCATAAAA 59.066 33.333 0.00 0.00 0.00 1.52
2579 3877 5.506317 CGATCTCCAATCATAAAACCAAGCC 60.506 44.000 0.00 0.00 0.00 4.35
2583 3881 1.111277 ATCATAAAACCAAGCCCCGC 58.889 50.000 0.00 0.00 0.00 6.13
2602 3900 1.718504 CTGCACGAATTCGCATTACG 58.281 50.000 27.03 10.12 44.43 3.18
2631 3929 3.186001 GTCTTCGATCCTATGCATTGCAG 59.814 47.826 17.52 4.21 43.65 4.41
2632 3930 1.516161 TCGATCCTATGCATTGCAGC 58.484 50.000 17.52 0.00 43.65 5.25
2633 3931 0.520404 CGATCCTATGCATTGCAGCC 59.480 55.000 17.52 1.81 43.65 4.85
2634 3932 1.881072 CGATCCTATGCATTGCAGCCT 60.881 52.381 17.52 2.90 43.65 4.58
2635 3933 2.613725 CGATCCTATGCATTGCAGCCTA 60.614 50.000 17.52 3.99 43.65 3.93
2636 3934 3.415212 GATCCTATGCATTGCAGCCTAA 58.585 45.455 17.52 2.05 43.65 2.69
2637 3935 3.295585 TCCTATGCATTGCAGCCTAAA 57.704 42.857 17.52 0.00 43.65 1.85
2638 3936 2.951642 TCCTATGCATTGCAGCCTAAAC 59.048 45.455 17.52 0.00 43.65 2.01
2639 3937 2.689471 CCTATGCATTGCAGCCTAAACA 59.311 45.455 17.52 0.00 43.65 2.83
2640 3938 2.660189 ATGCATTGCAGCCTAAACAC 57.340 45.000 17.52 0.00 43.65 3.32
2641 3939 0.602562 TGCATTGCAGCCTAAACACC 59.397 50.000 7.38 0.00 33.32 4.16
2642 3940 0.890683 GCATTGCAGCCTAAACACCT 59.109 50.000 3.15 0.00 0.00 4.00
2643 3941 1.135286 GCATTGCAGCCTAAACACCTC 60.135 52.381 3.15 0.00 0.00 3.85
2644 3942 1.474077 CATTGCAGCCTAAACACCTCC 59.526 52.381 0.00 0.00 0.00 4.30
2645 3943 0.771127 TTGCAGCCTAAACACCTCCT 59.229 50.000 0.00 0.00 0.00 3.69
2646 3944 0.771127 TGCAGCCTAAACACCTCCTT 59.229 50.000 0.00 0.00 0.00 3.36
2647 3945 1.144913 TGCAGCCTAAACACCTCCTTT 59.855 47.619 0.00 0.00 0.00 3.11
2648 3946 1.541588 GCAGCCTAAACACCTCCTTTG 59.458 52.381 0.00 0.00 0.00 2.77
2649 3947 2.162681 CAGCCTAAACACCTCCTTTGG 58.837 52.381 0.00 0.00 0.00 3.28
2650 3948 1.780919 AGCCTAAACACCTCCTTTGGT 59.219 47.619 0.00 0.00 41.77 3.67
2651 3949 2.177016 AGCCTAAACACCTCCTTTGGTT 59.823 45.455 0.00 0.00 38.45 3.67
2652 3950 2.963101 GCCTAAACACCTCCTTTGGTTT 59.037 45.455 0.00 0.00 38.45 3.27
2653 3951 3.243737 GCCTAAACACCTCCTTTGGTTTG 60.244 47.826 0.00 0.00 38.45 2.93
2654 3952 4.211920 CCTAAACACCTCCTTTGGTTTGA 58.788 43.478 0.00 0.00 38.45 2.69
2655 3953 4.647399 CCTAAACACCTCCTTTGGTTTGAA 59.353 41.667 0.00 0.00 38.45 2.69
2656 3954 4.736126 AAACACCTCCTTTGGTTTGAAG 57.264 40.909 0.00 0.00 38.45 3.02
2657 3955 2.666317 ACACCTCCTTTGGTTTGAAGG 58.334 47.619 0.00 0.00 44.06 3.46
2721 4019 5.619625 AAAAATCCTTCAGAGCTCTTTCG 57.380 39.130 15.27 2.92 0.00 3.46
2722 4020 3.971245 AATCCTTCAGAGCTCTTTCGT 57.029 42.857 15.27 0.00 0.00 3.85
2723 4021 3.971245 ATCCTTCAGAGCTCTTTCGTT 57.029 42.857 15.27 0.00 0.00 3.85
2724 4022 3.753294 TCCTTCAGAGCTCTTTCGTTT 57.247 42.857 15.27 0.00 0.00 3.60
2725 4023 3.393800 TCCTTCAGAGCTCTTTCGTTTG 58.606 45.455 15.27 1.50 0.00 2.93
2726 4024 3.134458 CCTTCAGAGCTCTTTCGTTTGT 58.866 45.455 15.27 0.00 0.00 2.83
2727 4025 4.038763 TCCTTCAGAGCTCTTTCGTTTGTA 59.961 41.667 15.27 0.00 0.00 2.41
2728 4026 4.387256 CCTTCAGAGCTCTTTCGTTTGTAG 59.613 45.833 15.27 5.08 0.00 2.74
2729 4027 3.914312 TCAGAGCTCTTTCGTTTGTAGG 58.086 45.455 15.27 0.00 0.00 3.18
2730 4028 3.572682 TCAGAGCTCTTTCGTTTGTAGGA 59.427 43.478 15.27 0.20 0.00 2.94
2731 4029 4.038763 TCAGAGCTCTTTCGTTTGTAGGAA 59.961 41.667 15.27 0.00 0.00 3.36
2732 4030 4.932200 CAGAGCTCTTTCGTTTGTAGGAAT 59.068 41.667 15.27 0.00 0.00 3.01
2733 4031 4.932200 AGAGCTCTTTCGTTTGTAGGAATG 59.068 41.667 11.45 0.00 0.00 2.67
2734 4032 4.894784 AGCTCTTTCGTTTGTAGGAATGA 58.105 39.130 0.00 0.00 33.77 2.57
2735 4033 5.305585 AGCTCTTTCGTTTGTAGGAATGAA 58.694 37.500 0.00 0.00 34.19 2.57
2736 4034 5.763204 AGCTCTTTCGTTTGTAGGAATGAAA 59.237 36.000 5.28 5.28 40.40 2.69
2737 4035 6.431234 AGCTCTTTCGTTTGTAGGAATGAAAT 59.569 34.615 5.71 0.00 41.26 2.17
2738 4036 7.040409 AGCTCTTTCGTTTGTAGGAATGAAATT 60.040 33.333 5.71 0.00 41.26 1.82
2778 4076 9.745018 AGAATTCTTTCTATCCTTCACATTTCA 57.255 29.630 0.88 0.00 40.47 2.69
2813 4111 8.934023 AAACATTAACCTAGACTCAATGGAAA 57.066 30.769 0.00 0.00 32.20 3.13
2814 4112 8.934023 AACATTAACCTAGACTCAATGGAAAA 57.066 30.769 0.00 0.00 32.20 2.29
2815 4113 8.934023 ACATTAACCTAGACTCAATGGAAAAA 57.066 30.769 0.00 0.00 32.20 1.94
2816 4114 9.533831 ACATTAACCTAGACTCAATGGAAAAAT 57.466 29.630 0.00 0.00 32.20 1.82
2819 4117 9.807921 TTAACCTAGACTCAATGGAAAAATTCT 57.192 29.630 0.00 0.00 0.00 2.40
2821 4119 9.981460 AACCTAGACTCAATGGAAAAATTCTAT 57.019 29.630 0.00 0.00 31.64 1.98
2838 4136 9.822185 AAAATTCTATAATGTGAATCAAAGGGC 57.178 29.630 0.00 0.00 32.43 5.19
2839 4137 6.618287 TTCTATAATGTGAATCAAAGGGCG 57.382 37.500 0.00 0.00 0.00 6.13
2840 4138 5.680619 TCTATAATGTGAATCAAAGGGCGT 58.319 37.500 0.00 0.00 0.00 5.68
2841 4139 4.900635 ATAATGTGAATCAAAGGGCGTC 57.099 40.909 0.00 0.00 0.00 5.19
2842 4140 2.496899 ATGTGAATCAAAGGGCGTCT 57.503 45.000 0.00 0.00 0.00 4.18
2843 4141 2.270352 TGTGAATCAAAGGGCGTCTT 57.730 45.000 0.00 0.00 37.28 3.01
2844 4142 2.151202 TGTGAATCAAAGGGCGTCTTC 58.849 47.619 0.00 0.00 33.94 2.87
2845 4143 2.224523 TGTGAATCAAAGGGCGTCTTCT 60.225 45.455 0.00 0.00 33.94 2.85
2846 4144 2.814336 GTGAATCAAAGGGCGTCTTCTT 59.186 45.455 0.00 0.00 33.94 2.52
2847 4145 3.253432 GTGAATCAAAGGGCGTCTTCTTT 59.747 43.478 0.00 0.00 33.94 2.52
2848 4146 3.888930 TGAATCAAAGGGCGTCTTCTTTT 59.111 39.130 0.00 0.00 33.94 2.27
2849 4147 4.023193 TGAATCAAAGGGCGTCTTCTTTTC 60.023 41.667 0.00 0.00 33.94 2.29
2850 4148 3.208747 TCAAAGGGCGTCTTCTTTTCT 57.791 42.857 0.00 0.00 33.94 2.52
2851 4149 4.345859 TCAAAGGGCGTCTTCTTTTCTA 57.654 40.909 0.00 0.00 33.94 2.10
2852 4150 4.906618 TCAAAGGGCGTCTTCTTTTCTAT 58.093 39.130 0.00 0.00 33.94 1.98
2853 4151 5.313712 TCAAAGGGCGTCTTCTTTTCTATT 58.686 37.500 0.00 0.00 33.94 1.73
2854 4152 5.411669 TCAAAGGGCGTCTTCTTTTCTATTC 59.588 40.000 0.00 0.00 33.94 1.75
2855 4153 3.875125 AGGGCGTCTTCTTTTCTATTCC 58.125 45.455 0.00 0.00 0.00 3.01
2856 4154 3.519913 AGGGCGTCTTCTTTTCTATTCCT 59.480 43.478 0.00 0.00 0.00 3.36
2857 4155 4.715297 AGGGCGTCTTCTTTTCTATTCCTA 59.285 41.667 0.00 0.00 0.00 2.94
2858 4156 5.367060 AGGGCGTCTTCTTTTCTATTCCTAT 59.633 40.000 0.00 0.00 0.00 2.57
2859 4157 5.467063 GGGCGTCTTCTTTTCTATTCCTATG 59.533 44.000 0.00 0.00 0.00 2.23
2860 4158 5.050023 GGCGTCTTCTTTTCTATTCCTATGC 60.050 44.000 0.00 0.00 0.00 3.14
2861 4159 5.523916 GCGTCTTCTTTTCTATTCCTATGCA 59.476 40.000 0.00 0.00 0.00 3.96
2862 4160 6.203723 GCGTCTTCTTTTCTATTCCTATGCAT 59.796 38.462 3.79 3.79 0.00 3.96
2863 4161 7.385205 GCGTCTTCTTTTCTATTCCTATGCATA 59.615 37.037 6.20 6.20 0.00 3.14
2864 4162 9.261180 CGTCTTCTTTTCTATTCCTATGCATAA 57.739 33.333 8.00 0.00 0.00 1.90
2876 4174 7.444629 TTCCTATGCATAAGATTTGAGATGC 57.555 36.000 8.00 0.00 44.00 3.91
2882 4180 6.068473 GCATAAGATTTGAGATGCATGTCA 57.932 37.500 21.70 21.70 43.36 3.58
2883 4181 6.678878 GCATAAGATTTGAGATGCATGTCAT 58.321 36.000 25.41 13.07 43.36 3.06
2896 4194 6.819397 ATGCATGTCATCTCATTTCCTATG 57.181 37.500 0.00 0.00 0.00 2.23
2897 4195 5.932455 TGCATGTCATCTCATTTCCTATGA 58.068 37.500 0.00 0.00 0.00 2.15
2898 4196 5.761726 TGCATGTCATCTCATTTCCTATGAC 59.238 40.000 7.23 7.23 45.40 3.06
2937 4235 9.880157 ATGAATTTTCAATCCTATGAACCAAAG 57.120 29.630 0.00 0.00 41.13 2.77
2938 4236 8.313292 TGAATTTTCAATCCTATGAACCAAAGG 58.687 33.333 0.00 0.00 38.95 3.11
2939 4237 8.434589 AATTTTCAATCCTATGAACCAAAGGA 57.565 30.769 0.00 0.00 43.38 3.36
2940 4238 7.466746 TTTTCAATCCTATGAACCAAAGGAG 57.533 36.000 0.00 0.00 42.53 3.69
2941 4239 4.526970 TCAATCCTATGAACCAAAGGAGC 58.473 43.478 0.00 0.00 42.53 4.70
2942 4240 3.584733 ATCCTATGAACCAAAGGAGCC 57.415 47.619 0.00 0.00 42.53 4.70
2943 4241 1.564348 TCCTATGAACCAAAGGAGCCC 59.436 52.381 0.00 0.00 34.46 5.19
2944 4242 1.566231 CCTATGAACCAAAGGAGCCCT 59.434 52.381 0.00 0.00 33.87 5.19
2945 4243 2.648059 CTATGAACCAAAGGAGCCCTG 58.352 52.381 0.00 0.00 32.13 4.45
2946 4244 1.075601 ATGAACCAAAGGAGCCCTGA 58.924 50.000 0.00 0.00 32.13 3.86
2947 4245 0.850100 TGAACCAAAGGAGCCCTGAA 59.150 50.000 0.00 0.00 32.13 3.02
2948 4246 1.428912 TGAACCAAAGGAGCCCTGAAT 59.571 47.619 0.00 0.00 32.13 2.57
2949 4247 2.158325 TGAACCAAAGGAGCCCTGAATT 60.158 45.455 0.00 0.00 32.13 2.17
2950 4248 2.702270 ACCAAAGGAGCCCTGAATTT 57.298 45.000 0.00 0.00 32.13 1.82
2951 4249 2.529632 ACCAAAGGAGCCCTGAATTTC 58.470 47.619 0.00 0.00 32.13 2.17
2952 4250 2.110721 ACCAAAGGAGCCCTGAATTTCT 59.889 45.455 0.00 0.00 32.13 2.52
2953 4251 3.333680 ACCAAAGGAGCCCTGAATTTCTA 59.666 43.478 0.00 0.00 32.13 2.10
2954 4252 3.950395 CCAAAGGAGCCCTGAATTTCTAG 59.050 47.826 0.00 0.00 32.13 2.43
2955 4253 4.568592 CCAAAGGAGCCCTGAATTTCTAGT 60.569 45.833 0.00 0.00 32.13 2.57
2956 4254 3.922171 AGGAGCCCTGAATTTCTAGTG 57.078 47.619 0.00 0.00 29.57 2.74
2957 4255 3.454858 AGGAGCCCTGAATTTCTAGTGA 58.545 45.455 0.00 0.00 29.57 3.41
2958 4256 4.043596 AGGAGCCCTGAATTTCTAGTGAT 58.956 43.478 0.00 0.00 29.57 3.06
2959 4257 4.476479 AGGAGCCCTGAATTTCTAGTGATT 59.524 41.667 0.00 0.00 29.57 2.57
2960 4258 5.667626 AGGAGCCCTGAATTTCTAGTGATTA 59.332 40.000 0.00 0.00 29.57 1.75
2961 4259 6.158695 AGGAGCCCTGAATTTCTAGTGATTAA 59.841 38.462 0.00 0.00 29.57 1.40
2962 4260 6.484977 GGAGCCCTGAATTTCTAGTGATTAAG 59.515 42.308 0.00 0.00 0.00 1.85
2963 4261 6.963322 AGCCCTGAATTTCTAGTGATTAAGT 58.037 36.000 0.00 0.00 0.00 2.24
2964 4262 7.406104 AGCCCTGAATTTCTAGTGATTAAGTT 58.594 34.615 0.00 0.00 0.00 2.66
2965 4263 7.890655 AGCCCTGAATTTCTAGTGATTAAGTTT 59.109 33.333 0.00 0.00 0.00 2.66
2966 4264 7.970614 GCCCTGAATTTCTAGTGATTAAGTTTG 59.029 37.037 0.00 0.00 0.00 2.93
2967 4265 9.231297 CCCTGAATTTCTAGTGATTAAGTTTGA 57.769 33.333 0.00 0.00 0.00 2.69
2969 4267 9.766277 CTGAATTTCTAGTGATTAAGTTTGAGC 57.234 33.333 0.00 0.00 0.00 4.26
2970 4268 9.283768 TGAATTTCTAGTGATTAAGTTTGAGCA 57.716 29.630 0.00 0.00 0.00 4.26
2971 4269 9.548208 GAATTTCTAGTGATTAAGTTTGAGCAC 57.452 33.333 0.00 0.00 33.87 4.40
2972 4270 8.854614 ATTTCTAGTGATTAAGTTTGAGCACT 57.145 30.769 11.42 11.42 44.10 4.40
2973 4271 7.658179 TTCTAGTGATTAAGTTTGAGCACTG 57.342 36.000 15.13 7.55 42.27 3.66
2974 4272 4.756084 AGTGATTAAGTTTGAGCACTGC 57.244 40.909 6.73 0.00 41.05 4.40
2975 4273 4.392940 AGTGATTAAGTTTGAGCACTGCT 58.607 39.130 2.22 2.22 41.05 4.24
2976 4274 4.823989 AGTGATTAAGTTTGAGCACTGCTT 59.176 37.500 4.67 0.00 41.05 3.91
2977 4275 5.300286 AGTGATTAAGTTTGAGCACTGCTTT 59.700 36.000 4.67 0.00 41.05 3.51
2978 4276 6.486657 AGTGATTAAGTTTGAGCACTGCTTTA 59.513 34.615 4.67 0.00 41.05 1.85
2979 4277 7.013274 AGTGATTAAGTTTGAGCACTGCTTTAA 59.987 33.333 4.67 6.19 41.05 1.52
2980 4278 7.647715 GTGATTAAGTTTGAGCACTGCTTTAAA 59.352 33.333 4.67 7.53 39.88 1.52
2981 4279 7.862372 TGATTAAGTTTGAGCACTGCTTTAAAG 59.138 33.333 11.02 11.02 39.88 1.85
2982 4280 5.835113 AAGTTTGAGCACTGCTTTAAAGA 57.165 34.783 19.48 3.58 39.88 2.52
2983 4281 5.835113 AGTTTGAGCACTGCTTTAAAGAA 57.165 34.783 19.48 7.64 39.88 2.52
2984 4282 6.207691 AGTTTGAGCACTGCTTTAAAGAAA 57.792 33.333 19.48 5.04 39.88 2.52
2985 4283 6.036470 AGTTTGAGCACTGCTTTAAAGAAAC 58.964 36.000 19.48 15.59 39.88 2.78
2986 4284 5.574891 TTGAGCACTGCTTTAAAGAAACA 57.425 34.783 19.48 6.62 39.88 2.83
2987 4285 5.574891 TGAGCACTGCTTTAAAGAAACAA 57.425 34.783 19.48 0.00 39.88 2.83
2988 4286 5.960113 TGAGCACTGCTTTAAAGAAACAAA 58.040 33.333 19.48 0.00 39.88 2.83
2989 4287 6.572519 TGAGCACTGCTTTAAAGAAACAAAT 58.427 32.000 19.48 0.00 39.88 2.32
2990 4288 7.711846 TGAGCACTGCTTTAAAGAAACAAATA 58.288 30.769 19.48 0.00 39.88 1.40
2991 4289 8.194104 TGAGCACTGCTTTAAAGAAACAAATAA 58.806 29.630 19.48 0.00 39.88 1.40
2992 4290 8.940768 AGCACTGCTTTAAAGAAACAAATAAA 57.059 26.923 19.48 0.00 33.89 1.40
2993 4291 9.034544 AGCACTGCTTTAAAGAAACAAATAAAG 57.965 29.630 19.48 0.00 33.89 1.85
2994 4292 9.030301 GCACTGCTTTAAAGAAACAAATAAAGA 57.970 29.630 19.48 0.00 37.48 2.52
3005 4303 9.793259 AAGAAACAAATAAAGAGTAGGTGATGA 57.207 29.630 0.00 0.00 0.00 2.92
3006 4304 9.965902 AGAAACAAATAAAGAGTAGGTGATGAT 57.034 29.630 0.00 0.00 0.00 2.45
3009 4307 9.739276 AACAAATAAAGAGTAGGTGATGATTGA 57.261 29.630 0.00 0.00 0.00 2.57
3010 4308 9.739276 ACAAATAAAGAGTAGGTGATGATTGAA 57.261 29.630 0.00 0.00 0.00 2.69
3012 4310 9.965902 AAATAAAGAGTAGGTGATGATTGAAGT 57.034 29.630 0.00 0.00 0.00 3.01
3013 4311 9.965902 AATAAAGAGTAGGTGATGATTGAAGTT 57.034 29.630 0.00 0.00 0.00 2.66
3014 4312 9.965902 ATAAAGAGTAGGTGATGATTGAAGTTT 57.034 29.630 0.00 0.00 0.00 2.66
3015 4313 7.678947 AAGAGTAGGTGATGATTGAAGTTTG 57.321 36.000 0.00 0.00 0.00 2.93
3016 4314 6.773638 AGAGTAGGTGATGATTGAAGTTTGT 58.226 36.000 0.00 0.00 0.00 2.83
3017 4315 7.227156 AGAGTAGGTGATGATTGAAGTTTGTT 58.773 34.615 0.00 0.00 0.00 2.83
3018 4316 7.721399 AGAGTAGGTGATGATTGAAGTTTGTTT 59.279 33.333 0.00 0.00 0.00 2.83
3019 4317 8.237811 AGTAGGTGATGATTGAAGTTTGTTTT 57.762 30.769 0.00 0.00 0.00 2.43
3020 4318 8.352942 AGTAGGTGATGATTGAAGTTTGTTTTC 58.647 33.333 0.00 0.00 0.00 2.29
3021 4319 7.111247 AGGTGATGATTGAAGTTTGTTTTCA 57.889 32.000 0.00 0.00 33.00 2.69
3022 4320 7.205297 AGGTGATGATTGAAGTTTGTTTTCAG 58.795 34.615 0.00 0.00 36.07 3.02
3023 4321 7.068593 AGGTGATGATTGAAGTTTGTTTTCAGA 59.931 33.333 0.00 0.00 36.07 3.27
3024 4322 7.869429 GGTGATGATTGAAGTTTGTTTTCAGAT 59.131 33.333 0.00 0.00 36.07 2.90
3025 4323 9.897744 GTGATGATTGAAGTTTGTTTTCAGATA 57.102 29.630 0.00 0.00 36.07 1.98
3054 4352 9.767684 TCTTATATGCACAATAAAAACGACAAG 57.232 29.630 0.00 0.00 0.00 3.16
3055 4353 9.767684 CTTATATGCACAATAAAAACGACAAGA 57.232 29.630 0.00 0.00 0.00 3.02
3056 4354 9.767684 TTATATGCACAATAAAAACGACAAGAG 57.232 29.630 0.00 0.00 0.00 2.85
3057 4355 5.743026 TGCACAATAAAAACGACAAGAGA 57.257 34.783 0.00 0.00 0.00 3.10
3058 4356 6.125327 TGCACAATAAAAACGACAAGAGAA 57.875 33.333 0.00 0.00 0.00 2.87
3059 4357 6.556212 TGCACAATAAAAACGACAAGAGAAA 58.444 32.000 0.00 0.00 0.00 2.52
3060 4358 6.690957 TGCACAATAAAAACGACAAGAGAAAG 59.309 34.615 0.00 0.00 0.00 2.62
3061 4359 6.691388 GCACAATAAAAACGACAAGAGAAAGT 59.309 34.615 0.00 0.00 0.00 2.66
3062 4360 7.853929 GCACAATAAAAACGACAAGAGAAAGTA 59.146 33.333 0.00 0.00 0.00 2.24
3063 4361 9.155053 CACAATAAAAACGACAAGAGAAAGTAC 57.845 33.333 0.00 0.00 0.00 2.73
3064 4362 9.106070 ACAATAAAAACGACAAGAGAAAGTACT 57.894 29.630 0.00 0.00 0.00 2.73
3065 4363 9.931210 CAATAAAAACGACAAGAGAAAGTACTT 57.069 29.630 1.12 1.12 0.00 2.24
3069 4367 8.483307 AAAACGACAAGAGAAAGTACTTTACA 57.517 30.769 20.58 0.00 32.11 2.41
3070 4368 7.695869 AACGACAAGAGAAAGTACTTTACAG 57.304 36.000 20.58 14.98 32.11 2.74
3071 4369 6.803642 ACGACAAGAGAAAGTACTTTACAGT 58.196 36.000 20.58 17.41 36.99 3.55
3072 4370 7.934457 ACGACAAGAGAAAGTACTTTACAGTA 58.066 34.615 20.58 0.00 34.06 2.74
3073 4371 8.574737 ACGACAAGAGAAAGTACTTTACAGTAT 58.425 33.333 20.58 6.13 37.83 2.12
3101 4399 7.948357 ACACAATAACTTAGACTAGTGTCACA 58.052 34.615 0.00 0.00 45.20 3.58
3102 4400 8.585881 ACACAATAACTTAGACTAGTGTCACAT 58.414 33.333 0.00 0.00 45.20 3.21
3103 4401 8.864024 CACAATAACTTAGACTAGTGTCACATG 58.136 37.037 0.00 0.00 45.20 3.21
3104 4402 7.545965 ACAATAACTTAGACTAGTGTCACATGC 59.454 37.037 0.00 0.00 45.20 4.06
3105 4403 5.468540 AACTTAGACTAGTGTCACATGCA 57.531 39.130 0.00 0.00 45.20 3.96
3106 4404 5.667539 ACTTAGACTAGTGTCACATGCAT 57.332 39.130 0.00 0.00 45.20 3.96
3107 4405 6.775594 ACTTAGACTAGTGTCACATGCATA 57.224 37.500 0.00 0.00 45.20 3.14
3108 4406 7.170393 ACTTAGACTAGTGTCACATGCATAA 57.830 36.000 0.00 0.00 45.20 1.90
3109 4407 7.786030 ACTTAGACTAGTGTCACATGCATAAT 58.214 34.615 0.00 0.00 45.20 1.28
3110 4408 8.914011 ACTTAGACTAGTGTCACATGCATAATA 58.086 33.333 0.00 0.00 45.20 0.98
3111 4409 9.920133 CTTAGACTAGTGTCACATGCATAATAT 57.080 33.333 0.00 0.00 45.20 1.28
3140 4438 4.946478 AGTTACTCCCACTATGATGAGC 57.054 45.455 0.00 0.00 0.00 4.26
3141 4439 3.643792 AGTTACTCCCACTATGATGAGCC 59.356 47.826 0.00 0.00 0.00 4.70
3142 4440 2.485966 ACTCCCACTATGATGAGCCT 57.514 50.000 0.00 0.00 0.00 4.58
3143 4441 3.619900 ACTCCCACTATGATGAGCCTA 57.380 47.619 0.00 0.00 0.00 3.93
3144 4442 3.928754 ACTCCCACTATGATGAGCCTAA 58.071 45.455 0.00 0.00 0.00 2.69
3145 4443 4.497516 ACTCCCACTATGATGAGCCTAAT 58.502 43.478 0.00 0.00 0.00 1.73
3146 4444 4.285517 ACTCCCACTATGATGAGCCTAATG 59.714 45.833 0.00 0.00 0.00 1.90
3147 4445 3.008375 TCCCACTATGATGAGCCTAATGC 59.992 47.826 0.00 0.00 41.71 3.56
3158 4456 1.900237 GCCTAATGCTCAAACTTGCG 58.100 50.000 0.00 0.00 36.87 4.85
3159 4457 1.900237 CCTAATGCTCAAACTTGCGC 58.100 50.000 0.00 0.00 39.24 6.09
3160 4458 1.470098 CCTAATGCTCAAACTTGCGCT 59.530 47.619 9.73 0.00 39.50 5.92
3161 4459 2.476854 CCTAATGCTCAAACTTGCGCTC 60.477 50.000 9.73 0.00 39.50 5.03
3162 4460 0.953727 AATGCTCAAACTTGCGCTCA 59.046 45.000 9.73 0.00 39.50 4.26
3163 4461 1.171308 ATGCTCAAACTTGCGCTCAT 58.829 45.000 9.73 0.00 39.50 2.90
3164 4462 1.807139 TGCTCAAACTTGCGCTCATA 58.193 45.000 9.73 0.00 39.50 2.15
3165 4463 2.358957 TGCTCAAACTTGCGCTCATAT 58.641 42.857 9.73 0.00 39.50 1.78
3166 4464 2.096335 TGCTCAAACTTGCGCTCATATG 59.904 45.455 9.73 2.64 39.50 1.78
3167 4465 2.352651 GCTCAAACTTGCGCTCATATGA 59.647 45.455 9.73 5.07 36.08 2.15
3168 4466 3.003068 GCTCAAACTTGCGCTCATATGAT 59.997 43.478 9.73 0.00 36.08 2.45
3169 4467 4.497006 GCTCAAACTTGCGCTCATATGATT 60.497 41.667 9.73 0.00 36.08 2.57
3170 4468 5.277490 GCTCAAACTTGCGCTCATATGATTA 60.277 40.000 9.73 0.00 36.08 1.75
3171 4469 6.676237 TCAAACTTGCGCTCATATGATTAA 57.324 33.333 9.73 0.00 0.00 1.40
3172 4470 7.263100 TCAAACTTGCGCTCATATGATTAAT 57.737 32.000 9.73 0.00 0.00 1.40
3173 4471 7.134163 TCAAACTTGCGCTCATATGATTAATG 58.866 34.615 9.73 0.00 0.00 1.90
3174 4472 5.039480 ACTTGCGCTCATATGATTAATGC 57.961 39.130 9.73 4.87 0.00 3.56
3175 4473 4.516321 ACTTGCGCTCATATGATTAATGCA 59.484 37.500 9.73 9.22 0.00 3.96
3176 4474 4.673534 TGCGCTCATATGATTAATGCAG 57.326 40.909 9.73 4.11 0.00 4.41
3177 4475 3.120095 TGCGCTCATATGATTAATGCAGC 60.120 43.478 9.73 12.92 0.00 5.25
3178 4476 3.730061 GCGCTCATATGATTAATGCAGCC 60.730 47.826 5.72 0.00 30.42 4.85
3179 4477 3.437741 CGCTCATATGATTAATGCAGCCA 59.562 43.478 5.72 0.00 30.42 4.75
3180 4478 4.095932 CGCTCATATGATTAATGCAGCCAT 59.904 41.667 5.72 0.00 30.42 4.40
3181 4479 5.340803 GCTCATATGATTAATGCAGCCATG 58.659 41.667 5.72 0.00 0.00 3.66
3182 4480 5.105877 GCTCATATGATTAATGCAGCCATGT 60.106 40.000 5.72 0.00 0.00 3.21
3183 4481 6.262193 TCATATGATTAATGCAGCCATGTG 57.738 37.500 0.00 0.00 0.00 3.21
3184 4482 2.875087 TGATTAATGCAGCCATGTGC 57.125 45.000 1.45 1.45 44.27 4.57
3193 4491 4.771684 GCCATGTGCTAAGCAACG 57.228 55.556 0.00 0.00 41.47 4.10
3194 4492 1.137404 GCCATGTGCTAAGCAACGG 59.863 57.895 0.00 0.00 41.47 4.44
3195 4493 1.305219 GCCATGTGCTAAGCAACGGA 61.305 55.000 0.00 0.00 41.47 4.69
3196 4494 1.164411 CCATGTGCTAAGCAACGGAA 58.836 50.000 0.00 0.00 41.47 4.30
3197 4495 1.539388 CCATGTGCTAAGCAACGGAAA 59.461 47.619 0.00 0.00 41.47 3.13
3198 4496 2.030363 CCATGTGCTAAGCAACGGAAAA 60.030 45.455 0.00 0.00 41.47 2.29
3199 4497 3.367292 CCATGTGCTAAGCAACGGAAAAT 60.367 43.478 0.00 0.00 41.47 1.82
3200 4498 3.552604 TGTGCTAAGCAACGGAAAATC 57.447 42.857 0.00 0.00 41.47 2.17
3201 4499 2.881513 TGTGCTAAGCAACGGAAAATCA 59.118 40.909 0.00 0.00 41.47 2.57
3202 4500 3.316588 TGTGCTAAGCAACGGAAAATCAA 59.683 39.130 0.00 0.00 41.47 2.57
3203 4501 4.022416 TGTGCTAAGCAACGGAAAATCAAT 60.022 37.500 0.00 0.00 41.47 2.57
3204 4502 4.324402 GTGCTAAGCAACGGAAAATCAATG 59.676 41.667 0.00 0.00 41.47 2.82
3205 4503 3.304293 GCTAAGCAACGGAAAATCAATGC 59.696 43.478 0.00 0.00 0.00 3.56
3206 4504 3.665745 AAGCAACGGAAAATCAATGCT 57.334 38.095 0.00 0.00 45.32 3.79
3207 4505 2.950433 AGCAACGGAAAATCAATGCTG 58.050 42.857 0.00 0.00 42.12 4.41
3208 4506 2.557924 AGCAACGGAAAATCAATGCTGA 59.442 40.909 0.00 0.00 42.12 4.26
3209 4507 3.194116 AGCAACGGAAAATCAATGCTGAT 59.806 39.130 0.00 0.00 44.54 2.90
3210 4508 4.398988 AGCAACGGAAAATCAATGCTGATA 59.601 37.500 0.00 0.00 41.66 2.15
3211 4509 5.068198 AGCAACGGAAAATCAATGCTGATAT 59.932 36.000 0.00 0.00 41.66 1.63
3212 4510 5.174398 GCAACGGAAAATCAATGCTGATATG 59.826 40.000 0.00 0.00 41.66 1.78
3213 4511 4.863491 ACGGAAAATCAATGCTGATATGC 58.137 39.130 0.00 0.00 41.66 3.14
3214 4512 4.338964 ACGGAAAATCAATGCTGATATGCA 59.661 37.500 0.00 0.00 41.66 3.96
3215 4513 4.678287 CGGAAAATCAATGCTGATATGCAC 59.322 41.667 0.00 0.00 46.33 4.57
3216 4514 5.593968 GGAAAATCAATGCTGATATGCACA 58.406 37.500 0.00 0.00 46.33 4.57
3217 4515 5.461078 GGAAAATCAATGCTGATATGCACAC 59.539 40.000 0.00 0.00 46.33 3.82
3218 4516 4.579454 AATCAATGCTGATATGCACACC 57.421 40.909 0.00 0.00 46.33 4.16
3219 4517 3.286329 TCAATGCTGATATGCACACCT 57.714 42.857 0.00 0.00 46.33 4.00
3220 4518 3.208594 TCAATGCTGATATGCACACCTC 58.791 45.455 0.00 0.00 46.33 3.85
3221 4519 3.118149 TCAATGCTGATATGCACACCTCT 60.118 43.478 0.00 0.00 46.33 3.69
3222 4520 2.609427 TGCTGATATGCACACCTCTC 57.391 50.000 0.00 0.00 38.12 3.20
3223 4521 1.832998 TGCTGATATGCACACCTCTCA 59.167 47.619 0.00 0.00 38.12 3.27
3224 4522 2.436911 TGCTGATATGCACACCTCTCAT 59.563 45.455 0.00 0.00 38.12 2.90
3225 4523 2.806818 GCTGATATGCACACCTCTCATG 59.193 50.000 0.00 0.00 0.00 3.07
3226 4524 3.743584 GCTGATATGCACACCTCTCATGT 60.744 47.826 0.00 0.00 0.00 3.21
3232 4530 1.436600 CACACCTCTCATGTGTCAGC 58.563 55.000 0.00 0.00 44.77 4.26
3233 4531 0.322975 ACACCTCTCATGTGTCAGCC 59.677 55.000 0.00 0.00 43.15 4.85
3234 4532 0.322648 CACCTCTCATGTGTCAGCCA 59.677 55.000 0.00 0.00 0.00 4.75
3235 4533 1.059098 ACCTCTCATGTGTCAGCCAA 58.941 50.000 0.00 0.00 0.00 4.52
3236 4534 1.421268 ACCTCTCATGTGTCAGCCAAA 59.579 47.619 0.00 0.00 0.00 3.28
3237 4535 2.082231 CCTCTCATGTGTCAGCCAAAG 58.918 52.381 0.00 0.00 0.00 2.77
3238 4536 1.467734 CTCTCATGTGTCAGCCAAAGC 59.532 52.381 0.00 0.00 40.32 3.51
3239 4537 0.524862 CTCATGTGTCAGCCAAAGCC 59.475 55.000 0.00 0.00 41.25 4.35
3240 4538 0.111061 TCATGTGTCAGCCAAAGCCT 59.889 50.000 0.00 0.00 41.25 4.58
3241 4539 0.524862 CATGTGTCAGCCAAAGCCTC 59.475 55.000 0.00 0.00 41.25 4.70
3242 4540 0.403271 ATGTGTCAGCCAAAGCCTCT 59.597 50.000 0.00 0.00 41.25 3.69
3243 4541 1.055849 TGTGTCAGCCAAAGCCTCTA 58.944 50.000 0.00 0.00 41.25 2.43
3244 4542 1.002430 TGTGTCAGCCAAAGCCTCTAG 59.998 52.381 0.00 0.00 41.25 2.43
3245 4543 1.002544 GTGTCAGCCAAAGCCTCTAGT 59.997 52.381 0.00 0.00 41.25 2.57
3246 4544 2.233922 GTGTCAGCCAAAGCCTCTAGTA 59.766 50.000 0.00 0.00 41.25 1.82
3247 4545 2.233922 TGTCAGCCAAAGCCTCTAGTAC 59.766 50.000 0.00 0.00 41.25 2.73
3248 4546 1.476891 TCAGCCAAAGCCTCTAGTACG 59.523 52.381 0.00 0.00 41.25 3.67
3249 4547 0.175989 AGCCAAAGCCTCTAGTACGC 59.824 55.000 0.00 0.00 41.25 4.42
3250 4548 0.108329 GCCAAAGCCTCTAGTACGCA 60.108 55.000 0.00 0.00 0.00 5.24
3251 4549 1.473434 GCCAAAGCCTCTAGTACGCAT 60.473 52.381 0.00 0.00 0.00 4.73
3252 4550 2.205074 CCAAAGCCTCTAGTACGCATG 58.795 52.381 0.00 0.00 0.00 4.06
3253 4551 2.205074 CAAAGCCTCTAGTACGCATGG 58.795 52.381 0.00 0.00 0.00 3.66
3254 4552 0.105039 AAGCCTCTAGTACGCATGGC 59.895 55.000 12.75 12.75 40.54 4.40
3255 4553 1.301009 GCCTCTAGTACGCATGGCC 60.301 63.158 0.00 0.00 34.81 5.36
3256 4554 1.367840 CCTCTAGTACGCATGGCCC 59.632 63.158 0.00 0.00 0.00 5.80
3257 4555 1.399744 CCTCTAGTACGCATGGCCCA 61.400 60.000 0.00 0.00 0.00 5.36
3258 4556 0.681733 CTCTAGTACGCATGGCCCAT 59.318 55.000 0.00 0.00 0.00 4.00
3259 4557 1.070758 CTCTAGTACGCATGGCCCATT 59.929 52.381 0.00 0.00 0.00 3.16
3260 4558 1.488812 TCTAGTACGCATGGCCCATTT 59.511 47.619 0.00 0.00 0.00 2.32
3261 4559 2.701423 TCTAGTACGCATGGCCCATTTA 59.299 45.455 0.00 0.00 0.00 1.40
3262 4560 2.656947 AGTACGCATGGCCCATTTAT 57.343 45.000 0.00 0.00 0.00 1.40
3263 4561 2.229792 AGTACGCATGGCCCATTTATG 58.770 47.619 0.00 0.00 0.00 1.90
3264 4562 2.158682 AGTACGCATGGCCCATTTATGA 60.159 45.455 0.00 0.00 0.00 2.15
3265 4563 1.032014 ACGCATGGCCCATTTATGAC 58.968 50.000 0.00 0.00 0.00 3.06
3266 4564 1.031235 CGCATGGCCCATTTATGACA 58.969 50.000 0.00 0.00 0.00 3.58
3267 4565 1.614903 CGCATGGCCCATTTATGACAT 59.385 47.619 0.00 0.00 0.00 3.06
3268 4566 2.819019 CGCATGGCCCATTTATGACATA 59.181 45.455 0.00 0.00 0.00 2.29
3269 4567 3.444742 CGCATGGCCCATTTATGACATAT 59.555 43.478 0.00 0.00 0.00 1.78
3270 4568 4.082081 CGCATGGCCCATTTATGACATATT 60.082 41.667 0.00 0.00 0.00 1.28
3271 4569 5.413499 GCATGGCCCATTTATGACATATTC 58.587 41.667 0.00 0.00 0.00 1.75
3272 4570 5.047164 GCATGGCCCATTTATGACATATTCA 60.047 40.000 0.00 0.00 39.11 2.57
3274 4572 6.593268 TGGCCCATTTATGACATATTCATG 57.407 37.500 0.00 0.39 45.22 3.07
3276 4574 7.237255 TGGCCCATTTATGACATATTCATGTA 58.763 34.615 0.00 0.00 45.58 2.29
3277 4575 7.894897 TGGCCCATTTATGACATATTCATGTAT 59.105 33.333 0.00 0.00 45.58 2.29
3278 4576 9.407380 GGCCCATTTATGACATATTCATGTATA 57.593 33.333 0.00 0.00 45.58 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.179029 CCCCGTCCCATAATGTCACC 60.179 60.000 0.00 0.00 0.00 4.02
27 28 1.568504 TGTCCTAGTGTGGGATCACC 58.431 55.000 0.00 0.00 42.98 4.02
28 29 3.600388 CTTTGTCCTAGTGTGGGATCAC 58.400 50.000 0.00 0.00 43.87 3.06
32 33 1.429930 TGCTTTGTCCTAGTGTGGGA 58.570 50.000 0.00 0.00 0.00 4.37
42 43 1.081242 CACACGGCATGCTTTGTCC 60.081 57.895 18.92 0.00 0.00 4.02
45 46 0.454957 GCTACACACGGCATGCTTTG 60.455 55.000 18.92 16.62 0.00 2.77
77 80 3.823304 ACAAAGAAGGTGCAAGAGGAATC 59.177 43.478 0.00 0.00 0.00 2.52
95 98 5.916318 TCTTTACGAAGGGAGTAACACAAA 58.084 37.500 0.00 0.00 34.25 2.83
96 99 5.534207 TCTTTACGAAGGGAGTAACACAA 57.466 39.130 0.00 0.00 34.25 3.33
98 101 8.713737 ATATTTCTTTACGAAGGGAGTAACAC 57.286 34.615 0.00 0.00 34.25 3.32
153 156 8.893727 CCTCGGTAAAGAAATATGAGATTGTTT 58.106 33.333 0.00 0.00 0.00 2.83
154 157 8.265055 TCCTCGGTAAAGAAATATGAGATTGTT 58.735 33.333 0.00 0.00 0.00 2.83
155 158 7.792032 TCCTCGGTAAAGAAATATGAGATTGT 58.208 34.615 0.00 0.00 0.00 2.71
156 159 8.662781 TTCCTCGGTAAAGAAATATGAGATTG 57.337 34.615 0.00 0.00 0.00 2.67
157 160 8.487028 ACTTCCTCGGTAAAGAAATATGAGATT 58.513 33.333 0.00 0.00 0.00 2.40
158 161 8.024145 ACTTCCTCGGTAAAGAAATATGAGAT 57.976 34.615 0.00 0.00 0.00 2.75
159 162 7.419711 ACTTCCTCGGTAAAGAAATATGAGA 57.580 36.000 0.00 0.00 0.00 3.27
160 163 8.414778 AGTACTTCCTCGGTAAAGAAATATGAG 58.585 37.037 0.00 0.00 0.00 2.90
161 164 8.302515 AGTACTTCCTCGGTAAAGAAATATGA 57.697 34.615 0.00 0.00 0.00 2.15
162 165 8.943909 AAGTACTTCCTCGGTAAAGAAATATG 57.056 34.615 1.12 0.00 0.00 1.78
164 167 9.247861 AGTAAGTACTTCCTCGGTAAAGAAATA 57.752 33.333 12.39 0.00 31.13 1.40
165 168 8.131847 AGTAAGTACTTCCTCGGTAAAGAAAT 57.868 34.615 12.39 0.00 31.13 2.17
166 169 7.530426 AGTAAGTACTTCCTCGGTAAAGAAA 57.470 36.000 12.39 0.00 31.13 2.52
167 170 7.148171 GCTAGTAAGTACTTCCTCGGTAAAGAA 60.148 40.741 12.39 0.00 37.73 2.52
168 171 6.317391 GCTAGTAAGTACTTCCTCGGTAAAGA 59.683 42.308 12.39 0.00 37.73 2.52
180 183 9.646427 CTCAAAATTCTCTGCTAGTAAGTACTT 57.354 33.333 13.68 13.68 37.73 2.24
191 194 4.322567 GGAGACACTCAAAATTCTCTGCT 58.677 43.478 0.00 0.00 35.74 4.24
209 212 2.024273 AGACCCTCTGTATTTCGGGAGA 60.024 50.000 0.00 0.00 39.08 3.71
213 216 6.896021 TCTATTAGACCCTCTGTATTTCGG 57.104 41.667 0.00 0.00 0.00 4.30
214 217 8.112016 TGATCTATTAGACCCTCTGTATTTCG 57.888 38.462 0.00 0.00 0.00 3.46
235 238 5.174395 CCGAGTCCATAGGATTCATTGATC 58.826 45.833 8.90 0.00 38.18 2.92
248 251 8.617809 GCTAATTAATGAAAAACCGAGTCCATA 58.382 33.333 0.00 0.00 0.00 2.74
250 253 6.657541 AGCTAATTAATGAAAAACCGAGTCCA 59.342 34.615 0.00 0.00 0.00 4.02
252 255 7.748847 TCAGCTAATTAATGAAAAACCGAGTC 58.251 34.615 0.00 0.00 0.00 3.36
310 313 5.570589 GGAAAGCAAAAGATTTGACTCATCG 59.429 40.000 6.99 0.00 0.00 3.84
313 316 6.469782 AAGGAAAGCAAAAGATTTGACTCA 57.530 33.333 6.99 0.00 0.00 3.41
329 332 7.593644 ACGATCGGACAAAAATTTAAAGGAAAG 59.406 33.333 20.98 0.00 0.00 2.62
332 335 6.563222 ACGATCGGACAAAAATTTAAAGGA 57.437 33.333 20.98 0.00 0.00 3.36
333 336 6.858993 TGAACGATCGGACAAAAATTTAAAGG 59.141 34.615 20.98 0.00 0.00 3.11
334 337 7.589954 ACTGAACGATCGGACAAAAATTTAAAG 59.410 33.333 20.98 5.27 35.77 1.85
378 382 1.552337 GAGCCTGAGAATGACACCTGA 59.448 52.381 0.00 0.00 0.00 3.86
430 434 2.282462 GGGTTGGTGGCACCTGAG 60.282 66.667 34.69 0.00 39.58 3.35
475 479 2.249844 TTCGTTCTTGTTCCAGGGAC 57.750 50.000 0.00 0.00 0.00 4.46
505 509 2.657143 ACTACTGCTAGAGGTAGTGCC 58.343 52.381 20.08 0.00 44.44 5.01
506 510 4.453751 AGTACTACTGCTAGAGGTAGTGC 58.546 47.826 25.21 24.05 45.30 4.40
517 801 4.202182 TGTTCCGTTTCAAGTACTACTGCT 60.202 41.667 0.00 0.00 0.00 4.24
518 802 4.053295 TGTTCCGTTTCAAGTACTACTGC 58.947 43.478 0.00 0.00 0.00 4.40
519 803 4.150098 GCTGTTCCGTTTCAAGTACTACTG 59.850 45.833 0.00 0.00 0.00 2.74
638 923 1.140816 GAGACGCGCTATGGGATTTC 58.859 55.000 5.73 0.00 0.00 2.17
668 953 4.430765 TTCGCGGCGTCTTCCCTC 62.431 66.667 22.90 0.00 0.00 4.30
713 998 2.105128 TTTTGGTTGCCGTTGCCG 59.895 55.556 0.00 0.00 36.33 5.69
714 999 1.885388 GGTTTTGGTTGCCGTTGCC 60.885 57.895 0.00 0.00 36.33 4.52
715 1000 1.151172 CTGGTTTTGGTTGCCGTTGC 61.151 55.000 0.00 0.00 38.26 4.17
716 1001 0.174617 ACTGGTTTTGGTTGCCGTTG 59.825 50.000 0.00 0.00 0.00 4.10
717 1002 1.765230 TACTGGTTTTGGTTGCCGTT 58.235 45.000 0.00 0.00 0.00 4.44
718 1003 1.611491 CATACTGGTTTTGGTTGCCGT 59.389 47.619 0.00 0.00 0.00 5.68
748 1033 5.337250 GGATTGTTAACCCTGGTTTCATTCC 60.337 44.000 19.54 19.54 39.31 3.01
782 1067 2.108168 TCGGGGGAAGATTCACACTAG 58.892 52.381 0.00 0.00 29.74 2.57
783 1068 2.241281 TCGGGGGAAGATTCACACTA 57.759 50.000 0.00 0.00 29.74 2.74
784 1069 1.358152 TTCGGGGGAAGATTCACACT 58.642 50.000 0.00 0.00 29.74 3.55
785 1070 2.420058 ATTCGGGGGAAGATTCACAC 57.580 50.000 0.00 0.00 30.30 3.82
787 1072 3.315470 GCTTAATTCGGGGGAAGATTCAC 59.685 47.826 0.00 0.00 0.00 3.18
788 1073 3.202151 AGCTTAATTCGGGGGAAGATTCA 59.798 43.478 0.00 0.00 0.00 2.57
791 1076 3.435169 GGAAGCTTAATTCGGGGGAAGAT 60.435 47.826 0.00 0.00 0.00 2.40
792 1077 2.092592 GGAAGCTTAATTCGGGGGAAGA 60.093 50.000 0.00 0.00 0.00 2.87
793 1078 2.092375 AGGAAGCTTAATTCGGGGGAAG 60.092 50.000 0.00 0.00 0.00 3.46
794 1079 1.920351 AGGAAGCTTAATTCGGGGGAA 59.080 47.619 0.00 0.00 0.00 3.97
835 1132 5.622346 AAGGGGTCATAATTGAGAGAGAC 57.378 43.478 0.00 0.00 30.85 3.36
836 1133 5.726308 TCAAAGGGGTCATAATTGAGAGAGA 59.274 40.000 0.00 0.00 30.85 3.10
837 1134 5.819901 GTCAAAGGGGTCATAATTGAGAGAG 59.180 44.000 0.00 0.00 31.24 3.20
839 1136 5.749462 AGTCAAAGGGGTCATAATTGAGAG 58.251 41.667 0.00 0.00 31.24 3.20
840 1137 5.779241 AGTCAAAGGGGTCATAATTGAGA 57.221 39.130 0.00 0.00 31.24 3.27
841 1138 7.229506 GGAATAGTCAAAGGGGTCATAATTGAG 59.770 40.741 0.00 0.00 31.24 3.02
889 1186 4.425180 TGTACCACTACAACCACAACAT 57.575 40.909 0.00 0.00 29.36 2.71
894 1223 5.070047 AGGCTATATGTACCACTACAACCAC 59.930 44.000 0.00 0.00 36.43 4.16
895 1224 5.213519 AGGCTATATGTACCACTACAACCA 58.786 41.667 0.00 0.00 36.43 3.67
896 1225 5.564259 CGAGGCTATATGTACCACTACAACC 60.564 48.000 0.00 0.00 36.43 3.77
897 1226 5.009410 ACGAGGCTATATGTACCACTACAAC 59.991 44.000 0.00 0.00 36.43 3.32
898 1227 5.135383 ACGAGGCTATATGTACCACTACAA 58.865 41.667 0.00 0.00 36.43 2.41
899 1228 4.722220 ACGAGGCTATATGTACCACTACA 58.278 43.478 0.00 0.00 37.28 2.74
900 1229 4.142945 CGACGAGGCTATATGTACCACTAC 60.143 50.000 0.00 0.00 0.00 2.73
901 1230 3.999001 CGACGAGGCTATATGTACCACTA 59.001 47.826 0.00 0.00 0.00 2.74
902 1231 2.812591 CGACGAGGCTATATGTACCACT 59.187 50.000 0.00 0.00 0.00 4.00
903 1232 2.667724 GCGACGAGGCTATATGTACCAC 60.668 54.545 0.00 0.00 0.00 4.16
904 1233 1.538512 GCGACGAGGCTATATGTACCA 59.461 52.381 0.00 0.00 0.00 3.25
905 1234 1.538512 TGCGACGAGGCTATATGTACC 59.461 52.381 0.00 0.00 0.00 3.34
945 1274 0.672711 GGCCCGTTCCAAGTCTACAC 60.673 60.000 0.00 0.00 0.00 2.90
947 1276 0.252197 ATGGCCCGTTCCAAGTCTAC 59.748 55.000 0.00 0.00 39.96 2.59
959 1288 1.567504 CAACTCGTACTAATGGCCCG 58.432 55.000 0.00 0.00 0.00 6.13
1248 1589 4.808238 GGCGACGACGAGGACGAC 62.808 72.222 12.29 0.00 42.66 4.34
1366 1707 1.300620 TCACCTTGAACGGCGTCTG 60.301 57.895 15.17 3.69 0.00 3.51
2100 2441 1.216710 GAGCACCTTCTCCGACTGG 59.783 63.158 0.00 0.00 0.00 4.00
2202 2543 1.008815 TGGATCCTCACCATCCTCACT 59.991 52.381 14.23 0.00 40.66 3.41
2281 2622 4.796830 CCAATGAACAAATCAATCGAGCAG 59.203 41.667 0.00 0.00 42.54 4.24
2423 2765 8.363390 TGCTGTTTCATGTACATTTTCCATAAA 58.637 29.630 5.37 0.00 0.00 1.40
2465 2807 9.173021 TCACATGAAATTTAAGACGGACATAAT 57.827 29.630 0.00 0.00 0.00 1.28
2469 2811 8.731275 ATATCACATGAAATTTAAGACGGACA 57.269 30.769 0.00 0.00 0.00 4.02
2497 3793 7.274447 ACTGCCAATTTCTTGAAGAAAATTGA 58.726 30.769 26.22 15.90 46.08 2.57
2530 3826 0.599558 CAGTGCAACAACCCATGAGG 59.400 55.000 0.00 0.00 41.43 3.86
2534 3830 1.993956 TAAGCAGTGCAACAACCCAT 58.006 45.000 19.20 0.00 41.43 4.00
2536 3832 1.135689 CGATAAGCAGTGCAACAACCC 60.136 52.381 19.20 0.00 41.43 4.11
2538 3834 3.372206 AGATCGATAAGCAGTGCAACAAC 59.628 43.478 19.20 3.71 41.43 3.32
2539 3835 3.599343 AGATCGATAAGCAGTGCAACAA 58.401 40.909 19.20 0.00 41.43 2.83
2551 3849 8.972458 TTGGTTTTATGATTGGAGATCGATAA 57.028 30.769 0.00 0.00 0.00 1.75
2552 3850 7.173218 GCTTGGTTTTATGATTGGAGATCGATA 59.827 37.037 0.00 0.00 0.00 2.92
2556 3854 5.221322 GGGCTTGGTTTTATGATTGGAGATC 60.221 44.000 0.00 0.00 0.00 2.75
2560 3858 3.103742 GGGGCTTGGTTTTATGATTGGA 58.896 45.455 0.00 0.00 0.00 3.53
2579 3877 4.520846 GCGAATTCGTGCAGCGGG 62.521 66.667 27.24 0.00 42.22 6.13
2583 3881 1.592110 CCGTAATGCGAATTCGTGCAG 60.592 52.381 27.24 14.36 45.52 4.41
2593 3891 1.466856 AGACCTACACCGTAATGCGA 58.533 50.000 0.00 0.00 44.77 5.10
2595 3893 2.159338 TCGAAGACCTACACCGTAATGC 60.159 50.000 0.00 0.00 0.00 3.56
2598 3896 2.684881 GGATCGAAGACCTACACCGTAA 59.315 50.000 0.00 0.00 42.51 3.18
2602 3900 3.305471 GCATAGGATCGAAGACCTACACC 60.305 52.174 15.23 6.49 42.51 4.16
2631 3929 2.287977 ACCAAAGGAGGTGTTTAGGC 57.712 50.000 0.00 0.00 41.30 3.93
2632 3930 4.211920 TCAAACCAAAGGAGGTGTTTAGG 58.788 43.478 0.00 0.00 42.25 2.69
2633 3931 5.221244 CCTTCAAACCAAAGGAGGTGTTTAG 60.221 44.000 0.00 0.00 45.15 1.85
2634 3932 4.647399 CCTTCAAACCAAAGGAGGTGTTTA 59.353 41.667 0.00 0.00 45.15 2.01
2635 3933 3.450817 CCTTCAAACCAAAGGAGGTGTTT 59.549 43.478 0.00 0.00 45.15 2.83
2636 3934 3.031013 CCTTCAAACCAAAGGAGGTGTT 58.969 45.455 0.00 0.00 45.15 3.32
2637 3935 2.243736 TCCTTCAAACCAAAGGAGGTGT 59.756 45.455 0.51 0.00 45.74 4.16
2638 3936 2.944129 TCCTTCAAACCAAAGGAGGTG 58.056 47.619 0.51 0.00 45.74 4.00
2699 3997 5.066593 ACGAAAGAGCTCTGAAGGATTTTT 58.933 37.500 19.06 3.88 0.00 1.94
2700 3998 4.646572 ACGAAAGAGCTCTGAAGGATTTT 58.353 39.130 19.06 4.70 0.00 1.82
2701 3999 4.278975 ACGAAAGAGCTCTGAAGGATTT 57.721 40.909 19.06 5.54 0.00 2.17
2702 4000 3.971245 ACGAAAGAGCTCTGAAGGATT 57.029 42.857 19.06 6.38 0.00 3.01
2703 4001 3.971245 AACGAAAGAGCTCTGAAGGAT 57.029 42.857 19.06 0.00 0.00 3.24
2704 4002 3.181465 ACAAACGAAAGAGCTCTGAAGGA 60.181 43.478 19.06 0.00 0.00 3.36
2705 4003 3.134458 ACAAACGAAAGAGCTCTGAAGG 58.866 45.455 19.06 9.75 0.00 3.46
2706 4004 4.387256 CCTACAAACGAAAGAGCTCTGAAG 59.613 45.833 19.06 13.57 0.00 3.02
2707 4005 4.038763 TCCTACAAACGAAAGAGCTCTGAA 59.961 41.667 19.06 0.00 0.00 3.02
2708 4006 3.572682 TCCTACAAACGAAAGAGCTCTGA 59.427 43.478 19.06 2.19 0.00 3.27
2709 4007 3.914312 TCCTACAAACGAAAGAGCTCTG 58.086 45.455 19.06 7.57 0.00 3.35
2710 4008 4.602340 TTCCTACAAACGAAAGAGCTCT 57.398 40.909 11.45 11.45 0.00 4.09
2711 4009 4.929808 TCATTCCTACAAACGAAAGAGCTC 59.070 41.667 5.27 5.27 0.00 4.09
2712 4010 4.894784 TCATTCCTACAAACGAAAGAGCT 58.105 39.130 0.00 0.00 0.00 4.09
2713 4011 5.607119 TTCATTCCTACAAACGAAAGAGC 57.393 39.130 0.00 0.00 0.00 4.09
2714 4012 8.507249 AGAATTTCATTCCTACAAACGAAAGAG 58.493 33.333 0.00 0.00 40.13 2.85
2715 4013 8.391075 AGAATTTCATTCCTACAAACGAAAGA 57.609 30.769 0.00 0.00 40.13 2.52
2788 4086 8.934023 TTTCCATTGAGTCTAGGTTAATGTTT 57.066 30.769 8.63 0.00 0.00 2.83
2789 4087 8.934023 TTTTCCATTGAGTCTAGGTTAATGTT 57.066 30.769 8.63 0.00 0.00 2.71
2790 4088 8.934023 TTTTTCCATTGAGTCTAGGTTAATGT 57.066 30.769 8.63 0.00 0.00 2.71
2793 4091 9.807921 AGAATTTTTCCATTGAGTCTAGGTTAA 57.192 29.630 0.00 0.00 0.00 2.01
2795 4093 9.981460 ATAGAATTTTTCCATTGAGTCTAGGTT 57.019 29.630 0.00 0.00 0.00 3.50
2812 4110 9.822185 GCCCTTTGATTCACATTATAGAATTTT 57.178 29.630 0.00 0.00 34.79 1.82
2813 4111 8.137437 CGCCCTTTGATTCACATTATAGAATTT 58.863 33.333 0.00 0.00 34.79 1.82
2814 4112 7.285401 ACGCCCTTTGATTCACATTATAGAATT 59.715 33.333 0.00 0.00 34.79 2.17
2815 4113 6.772716 ACGCCCTTTGATTCACATTATAGAAT 59.227 34.615 0.00 0.00 37.19 2.40
2816 4114 6.119536 ACGCCCTTTGATTCACATTATAGAA 58.880 36.000 0.00 0.00 0.00 2.10
2817 4115 5.680619 ACGCCCTTTGATTCACATTATAGA 58.319 37.500 0.00 0.00 0.00 1.98
2818 4116 5.760253 AGACGCCCTTTGATTCACATTATAG 59.240 40.000 0.00 0.00 0.00 1.31
2819 4117 5.680619 AGACGCCCTTTGATTCACATTATA 58.319 37.500 0.00 0.00 0.00 0.98
2820 4118 4.526970 AGACGCCCTTTGATTCACATTAT 58.473 39.130 0.00 0.00 0.00 1.28
2821 4119 3.950397 AGACGCCCTTTGATTCACATTA 58.050 40.909 0.00 0.00 0.00 1.90
2822 4120 2.795329 AGACGCCCTTTGATTCACATT 58.205 42.857 0.00 0.00 0.00 2.71
2823 4121 2.496899 AGACGCCCTTTGATTCACAT 57.503 45.000 0.00 0.00 0.00 3.21
2824 4122 2.151202 GAAGACGCCCTTTGATTCACA 58.849 47.619 0.00 0.00 34.68 3.58
2825 4123 2.427506 AGAAGACGCCCTTTGATTCAC 58.572 47.619 0.00 0.00 34.68 3.18
2826 4124 2.859165 AGAAGACGCCCTTTGATTCA 57.141 45.000 0.00 0.00 34.68 2.57
2827 4125 4.216472 AGAAAAGAAGACGCCCTTTGATTC 59.784 41.667 0.00 0.00 34.68 2.52
2828 4126 4.145052 AGAAAAGAAGACGCCCTTTGATT 58.855 39.130 0.00 0.00 34.68 2.57
2829 4127 3.756117 AGAAAAGAAGACGCCCTTTGAT 58.244 40.909 0.00 0.00 34.68 2.57
2830 4128 3.208747 AGAAAAGAAGACGCCCTTTGA 57.791 42.857 0.00 0.00 34.68 2.69
2831 4129 5.392057 GGAATAGAAAAGAAGACGCCCTTTG 60.392 44.000 0.00 0.00 34.68 2.77
2832 4130 4.700692 GGAATAGAAAAGAAGACGCCCTTT 59.299 41.667 0.00 0.00 34.68 3.11
2833 4131 4.019231 AGGAATAGAAAAGAAGACGCCCTT 60.019 41.667 0.00 0.00 37.93 3.95
2834 4132 3.519913 AGGAATAGAAAAGAAGACGCCCT 59.480 43.478 0.00 0.00 0.00 5.19
2835 4133 3.875125 AGGAATAGAAAAGAAGACGCCC 58.125 45.455 0.00 0.00 0.00 6.13
2836 4134 5.050023 GCATAGGAATAGAAAAGAAGACGCC 60.050 44.000 0.00 0.00 0.00 5.68
2837 4135 5.523916 TGCATAGGAATAGAAAAGAAGACGC 59.476 40.000 0.00 0.00 0.00 5.19
2838 4136 7.721286 ATGCATAGGAATAGAAAAGAAGACG 57.279 36.000 0.00 0.00 0.00 4.18
2850 4148 9.170734 GCATCTCAAATCTTATGCATAGGAATA 57.829 33.333 20.90 7.40 43.30 1.75
2851 4149 8.053026 GCATCTCAAATCTTATGCATAGGAAT 57.947 34.615 20.90 11.27 43.30 3.01
2852 4150 7.444629 GCATCTCAAATCTTATGCATAGGAA 57.555 36.000 20.90 5.49 43.30 3.36
2859 4157 6.068473 TGACATGCATCTCAAATCTTATGC 57.932 37.500 1.73 0.00 43.92 3.14
2873 4171 6.430308 GTCATAGGAAATGAGATGACATGCAT 59.570 38.462 8.58 0.00 44.91 3.96
2874 4172 5.761726 GTCATAGGAAATGAGATGACATGCA 59.238 40.000 8.58 0.00 44.91 3.96
2875 4173 6.238610 GTCATAGGAAATGAGATGACATGC 57.761 41.667 8.58 0.00 44.91 4.06
2911 4209 9.880157 CTTTGGTTCATAGGATTGAAAATTCAT 57.120 29.630 0.00 0.00 37.36 2.57
2912 4210 8.313292 CCTTTGGTTCATAGGATTGAAAATTCA 58.687 33.333 0.00 0.00 37.36 2.57
2913 4211 8.531146 TCCTTTGGTTCATAGGATTGAAAATTC 58.469 33.333 3.54 0.00 36.84 2.17
2914 4212 8.434589 TCCTTTGGTTCATAGGATTGAAAATT 57.565 30.769 3.54 0.00 36.84 1.82
2915 4213 7.364144 GCTCCTTTGGTTCATAGGATTGAAAAT 60.364 37.037 7.38 0.00 39.94 1.82
2916 4214 6.071391 GCTCCTTTGGTTCATAGGATTGAAAA 60.071 38.462 7.38 0.00 39.94 2.29
2917 4215 5.418840 GCTCCTTTGGTTCATAGGATTGAAA 59.581 40.000 7.38 0.00 39.94 2.69
2918 4216 4.949856 GCTCCTTTGGTTCATAGGATTGAA 59.050 41.667 7.38 0.00 39.94 2.69
2919 4217 4.526970 GCTCCTTTGGTTCATAGGATTGA 58.473 43.478 7.38 0.00 39.94 2.57
2920 4218 3.633986 GGCTCCTTTGGTTCATAGGATTG 59.366 47.826 7.38 0.33 39.94 2.67
2921 4219 3.373110 GGGCTCCTTTGGTTCATAGGATT 60.373 47.826 7.38 0.00 39.94 3.01
2922 4220 2.175715 GGGCTCCTTTGGTTCATAGGAT 59.824 50.000 7.38 0.00 39.94 3.24
2923 4221 1.564348 GGGCTCCTTTGGTTCATAGGA 59.436 52.381 6.86 6.86 38.81 2.94
2924 4222 1.566231 AGGGCTCCTTTGGTTCATAGG 59.434 52.381 0.00 0.00 34.61 2.57
2925 4223 2.239654 TCAGGGCTCCTTTGGTTCATAG 59.760 50.000 0.00 0.00 0.00 2.23
2926 4224 2.274542 TCAGGGCTCCTTTGGTTCATA 58.725 47.619 0.00 0.00 0.00 2.15
2927 4225 1.075601 TCAGGGCTCCTTTGGTTCAT 58.924 50.000 0.00 0.00 0.00 2.57
2928 4226 0.850100 TTCAGGGCTCCTTTGGTTCA 59.150 50.000 0.00 0.00 0.00 3.18
2929 4227 2.222227 ATTCAGGGCTCCTTTGGTTC 57.778 50.000 0.00 0.00 0.00 3.62
2930 4228 2.702270 AATTCAGGGCTCCTTTGGTT 57.298 45.000 0.00 0.00 0.00 3.67
2931 4229 2.110721 AGAAATTCAGGGCTCCTTTGGT 59.889 45.455 0.00 0.00 0.00 3.67
2932 4230 2.812658 AGAAATTCAGGGCTCCTTTGG 58.187 47.619 0.00 0.00 0.00 3.28
2933 4231 4.397417 CACTAGAAATTCAGGGCTCCTTTG 59.603 45.833 0.00 0.00 0.00 2.77
2934 4232 4.289672 TCACTAGAAATTCAGGGCTCCTTT 59.710 41.667 0.00 0.00 0.00 3.11
2935 4233 3.846588 TCACTAGAAATTCAGGGCTCCTT 59.153 43.478 0.00 0.00 0.00 3.36
2936 4234 3.454858 TCACTAGAAATTCAGGGCTCCT 58.545 45.455 0.00 0.00 0.00 3.69
2937 4235 3.914426 TCACTAGAAATTCAGGGCTCC 57.086 47.619 0.00 0.00 0.00 4.70
2938 4236 7.051000 ACTTAATCACTAGAAATTCAGGGCTC 58.949 38.462 0.00 0.00 0.00 4.70
2939 4237 6.963322 ACTTAATCACTAGAAATTCAGGGCT 58.037 36.000 0.00 0.00 0.00 5.19
2940 4238 7.631717 AACTTAATCACTAGAAATTCAGGGC 57.368 36.000 0.00 0.00 0.00 5.19
2941 4239 9.231297 TCAAACTTAATCACTAGAAATTCAGGG 57.769 33.333 0.00 0.00 0.00 4.45
2943 4241 9.766277 GCTCAAACTTAATCACTAGAAATTCAG 57.234 33.333 0.00 0.00 0.00 3.02
2944 4242 9.283768 TGCTCAAACTTAATCACTAGAAATTCA 57.716 29.630 0.00 0.00 0.00 2.57
2945 4243 9.548208 GTGCTCAAACTTAATCACTAGAAATTC 57.452 33.333 0.00 0.00 0.00 2.17
2946 4244 9.289782 AGTGCTCAAACTTAATCACTAGAAATT 57.710 29.630 0.00 0.00 33.56 1.82
2947 4245 8.725148 CAGTGCTCAAACTTAATCACTAGAAAT 58.275 33.333 0.00 0.00 33.93 2.17
2948 4246 7.307989 GCAGTGCTCAAACTTAATCACTAGAAA 60.308 37.037 8.18 0.00 33.93 2.52
2949 4247 6.147821 GCAGTGCTCAAACTTAATCACTAGAA 59.852 38.462 8.18 0.00 33.93 2.10
2950 4248 5.639506 GCAGTGCTCAAACTTAATCACTAGA 59.360 40.000 8.18 0.00 33.93 2.43
2951 4249 5.641209 AGCAGTGCTCAAACTTAATCACTAG 59.359 40.000 13.14 0.00 30.62 2.57
2952 4250 5.551233 AGCAGTGCTCAAACTTAATCACTA 58.449 37.500 13.14 0.00 30.62 2.74
2953 4251 4.392940 AGCAGTGCTCAAACTTAATCACT 58.607 39.130 13.14 0.00 30.62 3.41
2954 4252 4.756084 AGCAGTGCTCAAACTTAATCAC 57.244 40.909 13.14 0.00 30.62 3.06
2955 4253 5.772825 AAAGCAGTGCTCAAACTTAATCA 57.227 34.783 20.03 0.00 38.25 2.57
2956 4254 8.076178 TCTTTAAAGCAGTGCTCAAACTTAATC 58.924 33.333 20.03 0.00 38.25 1.75
2957 4255 7.940850 TCTTTAAAGCAGTGCTCAAACTTAAT 58.059 30.769 20.03 0.00 38.25 1.40
2958 4256 7.328277 TCTTTAAAGCAGTGCTCAAACTTAA 57.672 32.000 20.03 15.56 38.25 1.85
2959 4257 6.935741 TCTTTAAAGCAGTGCTCAAACTTA 57.064 33.333 20.03 10.09 38.25 2.24
2960 4258 5.835113 TCTTTAAAGCAGTGCTCAAACTT 57.165 34.783 20.03 11.18 38.25 2.66
2961 4259 5.835113 TTCTTTAAAGCAGTGCTCAAACT 57.165 34.783 20.03 0.00 38.25 2.66
2962 4260 5.804979 TGTTTCTTTAAAGCAGTGCTCAAAC 59.195 36.000 20.03 18.18 38.25 2.93
2963 4261 5.960113 TGTTTCTTTAAAGCAGTGCTCAAA 58.040 33.333 20.03 19.13 38.25 2.69
2964 4262 5.574891 TGTTTCTTTAAAGCAGTGCTCAA 57.425 34.783 20.03 12.88 38.25 3.02
2965 4263 5.574891 TTGTTTCTTTAAAGCAGTGCTCA 57.425 34.783 20.03 6.69 38.25 4.26
2966 4264 8.574196 TTATTTGTTTCTTTAAAGCAGTGCTC 57.426 30.769 20.03 2.68 38.25 4.26
2967 4265 8.940768 TTTATTTGTTTCTTTAAAGCAGTGCT 57.059 26.923 13.14 13.14 42.56 4.40
2968 4266 9.030301 TCTTTATTTGTTTCTTTAAAGCAGTGC 57.970 29.630 7.13 7.13 33.63 4.40
2979 4277 9.793259 TCATCACCTACTCTTTATTTGTTTCTT 57.207 29.630 0.00 0.00 0.00 2.52
2980 4278 9.965902 ATCATCACCTACTCTTTATTTGTTTCT 57.034 29.630 0.00 0.00 0.00 2.52
2983 4281 9.739276 TCAATCATCACCTACTCTTTATTTGTT 57.261 29.630 0.00 0.00 0.00 2.83
2984 4282 9.739276 TTCAATCATCACCTACTCTTTATTTGT 57.261 29.630 0.00 0.00 0.00 2.83
2986 4284 9.965902 ACTTCAATCATCACCTACTCTTTATTT 57.034 29.630 0.00 0.00 0.00 1.40
2987 4285 9.965902 AACTTCAATCATCACCTACTCTTTATT 57.034 29.630 0.00 0.00 0.00 1.40
2988 4286 9.965902 AAACTTCAATCATCACCTACTCTTTAT 57.034 29.630 0.00 0.00 0.00 1.40
2989 4287 9.219603 CAAACTTCAATCATCACCTACTCTTTA 57.780 33.333 0.00 0.00 0.00 1.85
2990 4288 7.721399 ACAAACTTCAATCATCACCTACTCTTT 59.279 33.333 0.00 0.00 0.00 2.52
2991 4289 7.227156 ACAAACTTCAATCATCACCTACTCTT 58.773 34.615 0.00 0.00 0.00 2.85
2992 4290 6.773638 ACAAACTTCAATCATCACCTACTCT 58.226 36.000 0.00 0.00 0.00 3.24
2993 4291 7.440523 AACAAACTTCAATCATCACCTACTC 57.559 36.000 0.00 0.00 0.00 2.59
2994 4292 7.823745 AAACAAACTTCAATCATCACCTACT 57.176 32.000 0.00 0.00 0.00 2.57
2995 4293 8.134895 TGAAAACAAACTTCAATCATCACCTAC 58.865 33.333 0.00 0.00 29.93 3.18
2996 4294 8.231692 TGAAAACAAACTTCAATCATCACCTA 57.768 30.769 0.00 0.00 29.93 3.08
2997 4295 7.068593 TCTGAAAACAAACTTCAATCATCACCT 59.931 33.333 0.00 0.00 32.57 4.00
2998 4296 7.202526 TCTGAAAACAAACTTCAATCATCACC 58.797 34.615 0.00 0.00 32.57 4.02
2999 4297 8.807667 ATCTGAAAACAAACTTCAATCATCAC 57.192 30.769 0.00 0.00 32.57 3.06
3028 4326 9.767684 CTTGTCGTTTTTATTGTGCATATAAGA 57.232 29.630 0.00 0.00 0.00 2.10
3029 4327 9.767684 TCTTGTCGTTTTTATTGTGCATATAAG 57.232 29.630 0.00 0.00 0.00 1.73
3030 4328 9.767684 CTCTTGTCGTTTTTATTGTGCATATAA 57.232 29.630 0.00 0.00 0.00 0.98
3031 4329 9.157104 TCTCTTGTCGTTTTTATTGTGCATATA 57.843 29.630 0.00 0.00 0.00 0.86
3032 4330 8.039603 TCTCTTGTCGTTTTTATTGTGCATAT 57.960 30.769 0.00 0.00 0.00 1.78
3033 4331 7.428282 TCTCTTGTCGTTTTTATTGTGCATA 57.572 32.000 0.00 0.00 0.00 3.14
3034 4332 6.312399 TCTCTTGTCGTTTTTATTGTGCAT 57.688 33.333 0.00 0.00 0.00 3.96
3035 4333 5.743026 TCTCTTGTCGTTTTTATTGTGCA 57.257 34.783 0.00 0.00 0.00 4.57
3036 4334 6.691388 ACTTTCTCTTGTCGTTTTTATTGTGC 59.309 34.615 0.00 0.00 0.00 4.57
3037 4335 9.155053 GTACTTTCTCTTGTCGTTTTTATTGTG 57.845 33.333 0.00 0.00 0.00 3.33
3038 4336 9.106070 AGTACTTTCTCTTGTCGTTTTTATTGT 57.894 29.630 0.00 0.00 0.00 2.71
3039 4337 9.931210 AAGTACTTTCTCTTGTCGTTTTTATTG 57.069 29.630 1.12 0.00 0.00 1.90
3043 4341 8.938906 TGTAAAGTACTTTCTCTTGTCGTTTTT 58.061 29.630 23.76 0.00 34.23 1.94
3044 4342 8.483307 TGTAAAGTACTTTCTCTTGTCGTTTT 57.517 30.769 23.76 0.00 34.23 2.43
3045 4343 7.763071 ACTGTAAAGTACTTTCTCTTGTCGTTT 59.237 33.333 23.76 0.00 34.23 3.60
3046 4344 7.263496 ACTGTAAAGTACTTTCTCTTGTCGTT 58.737 34.615 23.76 0.00 34.23 3.85
3047 4345 6.803642 ACTGTAAAGTACTTTCTCTTGTCGT 58.196 36.000 23.76 8.60 34.23 4.34
3048 4346 8.967552 ATACTGTAAAGTACTTTCTCTTGTCG 57.032 34.615 23.76 8.05 34.23 4.35
3076 4374 7.948357 TGTGACACTAGTCTAAGTTATTGTGT 58.052 34.615 7.20 0.00 45.20 3.72
3077 4375 8.864024 CATGTGACACTAGTCTAAGTTATTGTG 58.136 37.037 7.20 0.00 45.20 3.33
3078 4376 7.545965 GCATGTGACACTAGTCTAAGTTATTGT 59.454 37.037 7.20 0.00 45.20 2.71
3079 4377 7.545615 TGCATGTGACACTAGTCTAAGTTATTG 59.454 37.037 7.20 0.00 45.20 1.90
3080 4378 7.611770 TGCATGTGACACTAGTCTAAGTTATT 58.388 34.615 7.20 0.00 45.20 1.40
3081 4379 7.170393 TGCATGTGACACTAGTCTAAGTTAT 57.830 36.000 7.20 0.00 45.20 1.89
3082 4380 6.584185 TGCATGTGACACTAGTCTAAGTTA 57.416 37.500 7.20 0.00 45.20 2.24
3083 4381 5.468540 TGCATGTGACACTAGTCTAAGTT 57.531 39.130 7.20 0.00 45.20 2.66
3084 4382 5.667539 ATGCATGTGACACTAGTCTAAGT 57.332 39.130 7.20 0.00 45.20 2.24
3085 4383 9.920133 ATATTATGCATGTGACACTAGTCTAAG 57.080 33.333 10.16 0.00 45.20 2.18
3114 4412 8.754080 GCTCATCATAGTGGGAGTAACTTATAT 58.246 37.037 0.00 0.00 0.00 0.86
3115 4413 7.178628 GGCTCATCATAGTGGGAGTAACTTATA 59.821 40.741 0.00 0.00 0.00 0.98
3116 4414 6.014156 GGCTCATCATAGTGGGAGTAACTTAT 60.014 42.308 0.00 0.00 0.00 1.73
3117 4415 5.304614 GGCTCATCATAGTGGGAGTAACTTA 59.695 44.000 0.00 0.00 0.00 2.24
3118 4416 4.101741 GGCTCATCATAGTGGGAGTAACTT 59.898 45.833 0.00 0.00 0.00 2.66
3119 4417 3.643792 GGCTCATCATAGTGGGAGTAACT 59.356 47.826 0.00 0.00 0.00 2.24
3120 4418 3.643792 AGGCTCATCATAGTGGGAGTAAC 59.356 47.826 0.00 0.00 0.00 2.50
3121 4419 3.928754 AGGCTCATCATAGTGGGAGTAA 58.071 45.455 0.00 0.00 0.00 2.24
3122 4420 3.619900 AGGCTCATCATAGTGGGAGTA 57.380 47.619 0.00 0.00 0.00 2.59
3123 4421 2.485966 AGGCTCATCATAGTGGGAGT 57.514 50.000 0.00 0.00 0.00 3.85
3124 4422 4.829968 CATTAGGCTCATCATAGTGGGAG 58.170 47.826 0.00 0.00 0.00 4.30
3125 4423 3.008375 GCATTAGGCTCATCATAGTGGGA 59.992 47.826 0.00 0.00 40.25 4.37
3126 4424 3.341823 GCATTAGGCTCATCATAGTGGG 58.658 50.000 0.00 0.00 40.25 4.61
3139 4437 1.900237 CGCAAGTTTGAGCATTAGGC 58.100 50.000 0.00 0.00 45.30 3.93
3147 4445 4.808077 ATCATATGAGCGCAAGTTTGAG 57.192 40.909 11.47 0.00 41.68 3.02
3148 4446 6.676237 TTAATCATATGAGCGCAAGTTTGA 57.324 33.333 11.47 7.53 41.68 2.69
3149 4447 6.129273 GCATTAATCATATGAGCGCAAGTTTG 60.129 38.462 11.47 1.26 41.68 2.93
3150 4448 5.916883 GCATTAATCATATGAGCGCAAGTTT 59.083 36.000 11.47 0.65 41.68 2.66
3151 4449 5.008911 TGCATTAATCATATGAGCGCAAGTT 59.991 36.000 11.47 1.37 41.68 2.66
3152 4450 4.516321 TGCATTAATCATATGAGCGCAAGT 59.484 37.500 11.47 0.00 41.68 3.16
3153 4451 5.038247 TGCATTAATCATATGAGCGCAAG 57.962 39.130 11.47 1.10 43.44 4.01
3154 4452 4.614306 GCTGCATTAATCATATGAGCGCAA 60.614 41.667 11.47 0.00 0.00 4.85
3155 4453 3.120095 GCTGCATTAATCATATGAGCGCA 60.120 43.478 11.47 12.76 0.00 6.09
3156 4454 3.423571 GCTGCATTAATCATATGAGCGC 58.576 45.455 11.78 0.00 0.00 5.92
3157 4455 3.437741 TGGCTGCATTAATCATATGAGCG 59.562 43.478 11.78 6.49 32.15 5.03
3158 4456 5.105877 ACATGGCTGCATTAATCATATGAGC 60.106 40.000 11.78 9.05 0.00 4.26
3159 4457 6.322491 CACATGGCTGCATTAATCATATGAG 58.678 40.000 11.78 0.00 0.00 2.90
3160 4458 5.336134 GCACATGGCTGCATTAATCATATGA 60.336 40.000 8.10 8.10 40.25 2.15
3161 4459 4.862574 GCACATGGCTGCATTAATCATATG 59.137 41.667 0.50 0.00 40.25 1.78
3162 4460 5.068234 GCACATGGCTGCATTAATCATAT 57.932 39.130 0.50 0.00 40.25 1.78
3163 4461 4.508461 GCACATGGCTGCATTAATCATA 57.492 40.909 0.50 0.00 40.25 2.15
3164 4462 3.380479 GCACATGGCTGCATTAATCAT 57.620 42.857 0.50 0.00 40.25 2.45
3165 4463 2.875087 GCACATGGCTGCATTAATCA 57.125 45.000 0.50 0.00 40.25 2.57
3176 4474 1.137404 CCGTTGCTTAGCACATGGC 59.863 57.895 6.34 0.00 38.71 4.40
3177 4475 1.164411 TTCCGTTGCTTAGCACATGG 58.836 50.000 6.34 12.98 38.71 3.66
3178 4476 2.987413 TTTCCGTTGCTTAGCACATG 57.013 45.000 6.34 4.16 38.71 3.21
3179 4477 3.505680 TGATTTTCCGTTGCTTAGCACAT 59.494 39.130 6.34 0.00 38.71 3.21
3180 4478 2.881513 TGATTTTCCGTTGCTTAGCACA 59.118 40.909 6.34 0.00 38.71 4.57
3181 4479 3.552604 TGATTTTCCGTTGCTTAGCAC 57.447 42.857 6.34 1.40 38.71 4.40
3182 4480 4.484236 CATTGATTTTCCGTTGCTTAGCA 58.516 39.130 1.39 1.39 36.47 3.49
3183 4481 3.304293 GCATTGATTTTCCGTTGCTTAGC 59.696 43.478 0.00 0.00 0.00 3.09
3184 4482 4.560035 CAGCATTGATTTTCCGTTGCTTAG 59.440 41.667 0.00 0.00 38.30 2.18
3185 4483 4.217334 TCAGCATTGATTTTCCGTTGCTTA 59.783 37.500 0.00 0.00 38.30 3.09
3186 4484 3.005684 TCAGCATTGATTTTCCGTTGCTT 59.994 39.130 0.00 0.00 38.30 3.91
3187 4485 2.557924 TCAGCATTGATTTTCCGTTGCT 59.442 40.909 0.00 0.00 40.83 3.91
3188 4486 2.945278 TCAGCATTGATTTTCCGTTGC 58.055 42.857 0.00 0.00 0.00 4.17
3189 4487 5.174398 GCATATCAGCATTGATTTTCCGTTG 59.826 40.000 0.00 0.00 41.24 4.10
3190 4488 5.163530 TGCATATCAGCATTGATTTTCCGTT 60.164 36.000 0.00 0.00 41.24 4.44
3191 4489 4.338964 TGCATATCAGCATTGATTTTCCGT 59.661 37.500 0.00 0.00 41.24 4.69
3192 4490 4.862350 TGCATATCAGCATTGATTTTCCG 58.138 39.130 0.00 0.00 41.24 4.30
3203 4501 1.832998 TGAGAGGTGTGCATATCAGCA 59.167 47.619 7.61 0.00 43.35 4.41
3204 4502 2.609427 TGAGAGGTGTGCATATCAGC 57.391 50.000 0.00 0.00 0.00 4.26
3205 4503 3.808174 CACATGAGAGGTGTGCATATCAG 59.192 47.826 0.00 0.00 40.30 2.90
3206 4504 3.800531 CACATGAGAGGTGTGCATATCA 58.199 45.455 0.00 0.00 40.30 2.15
3215 4513 0.322648 TGGCTGACACATGAGAGGTG 59.677 55.000 0.00 0.00 41.95 4.00
3216 4514 1.059098 TTGGCTGACACATGAGAGGT 58.941 50.000 0.00 0.00 0.00 3.85
3217 4515 2.082231 CTTTGGCTGACACATGAGAGG 58.918 52.381 0.00 0.00 0.00 3.69
3218 4516 1.467734 GCTTTGGCTGACACATGAGAG 59.532 52.381 0.00 0.00 35.22 3.20
3219 4517 1.527034 GCTTTGGCTGACACATGAGA 58.473 50.000 0.00 0.00 35.22 3.27
3220 4518 0.524862 GGCTTTGGCTGACACATGAG 59.475 55.000 0.00 0.00 38.73 2.90
3221 4519 0.111061 AGGCTTTGGCTGACACATGA 59.889 50.000 0.00 0.00 36.97 3.07
3222 4520 0.524862 GAGGCTTTGGCTGACACATG 59.475 55.000 0.00 0.00 38.98 3.21
3223 4521 0.403271 AGAGGCTTTGGCTGACACAT 59.597 50.000 0.00 0.00 38.98 3.21
3224 4522 1.002430 CTAGAGGCTTTGGCTGACACA 59.998 52.381 0.00 0.00 38.98 3.72
3225 4523 1.002544 ACTAGAGGCTTTGGCTGACAC 59.997 52.381 0.00 0.00 38.98 3.67
3226 4524 1.352083 ACTAGAGGCTTTGGCTGACA 58.648 50.000 0.00 0.00 38.98 3.58
3227 4525 2.735762 CGTACTAGAGGCTTTGGCTGAC 60.736 54.545 0.00 0.00 38.98 3.51
3228 4526 1.476891 CGTACTAGAGGCTTTGGCTGA 59.523 52.381 0.00 0.00 38.98 4.26
3229 4527 1.927895 CGTACTAGAGGCTTTGGCTG 58.072 55.000 0.00 0.00 38.98 4.85
3230 4528 0.175989 GCGTACTAGAGGCTTTGGCT 59.824 55.000 0.00 0.00 42.48 4.75
3231 4529 0.108329 TGCGTACTAGAGGCTTTGGC 60.108 55.000 0.00 0.00 39.76 4.52
3232 4530 2.205074 CATGCGTACTAGAGGCTTTGG 58.795 52.381 0.00 0.00 39.76 3.28
3233 4531 2.205074 CCATGCGTACTAGAGGCTTTG 58.795 52.381 0.00 1.21 39.76 2.77
3234 4532 1.473434 GCCATGCGTACTAGAGGCTTT 60.473 52.381 0.00 0.00 39.76 3.51
3235 4533 0.105039 GCCATGCGTACTAGAGGCTT 59.895 55.000 0.00 0.00 39.76 4.35
3236 4534 1.742768 GCCATGCGTACTAGAGGCT 59.257 57.895 0.00 0.00 39.76 4.58
3237 4535 1.301009 GGCCATGCGTACTAGAGGC 60.301 63.158 0.00 7.49 41.29 4.70
3238 4536 1.367840 GGGCCATGCGTACTAGAGG 59.632 63.158 4.39 0.00 0.00 3.69
3239 4537 0.681733 ATGGGCCATGCGTACTAGAG 59.318 55.000 20.49 0.00 0.00 2.43
3240 4538 1.128200 AATGGGCCATGCGTACTAGA 58.872 50.000 22.01 0.00 0.00 2.43
3241 4539 1.967319 AAATGGGCCATGCGTACTAG 58.033 50.000 22.01 0.00 0.00 2.57
3242 4540 3.071747 TCATAAATGGGCCATGCGTACTA 59.928 43.478 22.01 5.56 0.00 1.82
3243 4541 2.158682 TCATAAATGGGCCATGCGTACT 60.159 45.455 22.01 0.00 0.00 2.73
3244 4542 2.031157 GTCATAAATGGGCCATGCGTAC 60.031 50.000 22.01 11.27 0.00 3.67
3245 4543 2.226330 GTCATAAATGGGCCATGCGTA 58.774 47.619 22.01 13.15 0.00 4.42
3246 4544 1.032014 GTCATAAATGGGCCATGCGT 58.968 50.000 22.01 11.23 0.00 5.24
3247 4545 1.031235 TGTCATAAATGGGCCATGCG 58.969 50.000 22.01 9.03 0.00 4.73
3248 4546 5.047164 TGAATATGTCATAAATGGGCCATGC 60.047 40.000 22.01 6.10 0.00 4.06
3249 4547 6.593268 TGAATATGTCATAAATGGGCCATG 57.407 37.500 22.01 9.42 0.00 3.66
3250 4548 6.727231 ACATGAATATGTCATAAATGGGCCAT 59.273 34.615 14.78 14.78 45.69 4.40
3251 4549 6.076653 ACATGAATATGTCATAAATGGGCCA 58.923 36.000 9.61 9.61 45.69 5.36
3252 4550 6.594788 ACATGAATATGTCATAAATGGGCC 57.405 37.500 0.00 0.00 45.69 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.