Multiple sequence alignment - TraesCS6A01G257800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G257800 chr6A 100.000 2288 0 0 1 2288 479912667 479910380 0.000000e+00 4226
1 TraesCS6A01G257800 chr7D 95.023 1708 82 3 1 1706 98406306 98404600 0.000000e+00 2680
2 TraesCS6A01G257800 chr4D 94.780 1705 80 5 1 1704 504270333 504272029 0.000000e+00 2647
3 TraesCS6A01G257800 chr4D 94.373 1706 82 9 5 1704 466289367 466291064 0.000000e+00 2606
4 TraesCS6A01G257800 chr3D 94.721 1705 77 5 1 1703 479622721 479624414 0.000000e+00 2638
5 TraesCS6A01G257800 chr1D 94.376 1707 84 5 1 1706 421086760 421085065 0.000000e+00 2610
6 TraesCS6A01G257800 chr2A 94.121 1701 96 4 5 1703 165347572 165345874 0.000000e+00 2584
7 TraesCS6A01G257800 chr2A 93.615 1707 101 4 5 1706 68890357 68888654 0.000000e+00 2542
8 TraesCS6A01G257800 chr1A 93.955 1704 94 2 1 1703 493296185 493294490 0.000000e+00 2567
9 TraesCS6A01G257800 chr4A 93.146 1707 111 6 1 1703 619180418 619182122 0.000000e+00 2499
10 TraesCS6A01G257800 chr3A 85.470 117 15 1 1 117 589399995 589399881 1.110000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G257800 chr6A 479910380 479912667 2287 True 4226 4226 100.000 1 2288 1 chr6A.!!$R1 2287
1 TraesCS6A01G257800 chr7D 98404600 98406306 1706 True 2680 2680 95.023 1 1706 1 chr7D.!!$R1 1705
2 TraesCS6A01G257800 chr4D 504270333 504272029 1696 False 2647 2647 94.780 1 1704 1 chr4D.!!$F2 1703
3 TraesCS6A01G257800 chr4D 466289367 466291064 1697 False 2606 2606 94.373 5 1704 1 chr4D.!!$F1 1699
4 TraesCS6A01G257800 chr3D 479622721 479624414 1693 False 2638 2638 94.721 1 1703 1 chr3D.!!$F1 1702
5 TraesCS6A01G257800 chr1D 421085065 421086760 1695 True 2610 2610 94.376 1 1706 1 chr1D.!!$R1 1705
6 TraesCS6A01G257800 chr2A 165345874 165347572 1698 True 2584 2584 94.121 5 1703 1 chr2A.!!$R2 1698
7 TraesCS6A01G257800 chr2A 68888654 68890357 1703 True 2542 2542 93.615 5 1706 1 chr2A.!!$R1 1701
8 TraesCS6A01G257800 chr1A 493294490 493296185 1695 True 2567 2567 93.955 1 1703 1 chr1A.!!$R1 1702
9 TraesCS6A01G257800 chr4A 619180418 619182122 1704 False 2499 2499 93.146 1 1703 1 chr4A.!!$F1 1702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 613 0.121197 TGGGGAGGAGGAAGGTTGAT 59.879 55.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 2132 0.025513 CTCGCTCGATTTTCGCTTGG 59.974 55.0 0.0 0.0 40.21 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.441348 TGGATGGTCGAGCCGCTA 60.441 61.111 12.85 0.00 41.21 4.26
53 60 3.559242 GCCTTCATCTTCTTCTTCATCGG 59.441 47.826 0.00 0.00 0.00 4.18
54 61 4.764172 CCTTCATCTTCTTCTTCATCGGT 58.236 43.478 0.00 0.00 0.00 4.69
267 284 4.621769 AGCCCAGTAGGTCTTATACTTGT 58.378 43.478 0.00 0.00 38.26 3.16
293 310 4.040461 CACTTCTTCCTCTGTTTAGGGTCA 59.960 45.833 0.00 0.00 37.24 4.02
322 340 0.409092 ACCTGATTCATGGCCCAACA 59.591 50.000 0.00 0.00 0.00 3.33
396 415 2.744741 GCTCTTCTTTACTGGCCTTCAC 59.255 50.000 3.32 0.00 0.00 3.18
404 425 3.220999 CTGGCCTTCACGACCACGA 62.221 63.158 3.32 0.00 42.66 4.35
420 441 3.119743 ACCACGACATTCGATTCGTTCTA 60.120 43.478 12.90 0.00 46.04 2.10
485 506 0.388649 CTCGAACTTGGTCCGGTCAG 60.389 60.000 0.00 0.00 0.00 3.51
551 572 0.251787 GAAGGGGTTGGCATTGGAGT 60.252 55.000 0.00 0.00 0.00 3.85
592 613 0.121197 TGGGGAGGAGGAAGGTTGAT 59.879 55.000 0.00 0.00 0.00 2.57
615 636 0.336737 GAGAGAAGAGAGGGGGTGGA 59.663 60.000 0.00 0.00 0.00 4.02
625 646 4.077982 AGAGAGGGGGTGGATAAATAGTGA 60.078 45.833 0.00 0.00 0.00 3.41
665 688 2.122189 GGGGGATGGAGAGGAGGG 60.122 72.222 0.00 0.00 0.00 4.30
684 707 1.277557 GGGAAGAGTGACAGTCATGCT 59.722 52.381 6.51 4.45 0.00 3.79
714 737 5.181748 ACTACAAGCTCTTGAATTAGCCAG 58.818 41.667 15.74 0.00 42.93 4.85
925 953 1.601663 GCAACAAGCACCGCAATTACA 60.602 47.619 0.00 0.00 44.79 2.41
933 961 2.288666 CACCGCAATTACAGCCACTAT 58.711 47.619 0.00 0.00 0.00 2.12
984 1012 0.400213 AGGTCATCCTTGCACCGAAA 59.600 50.000 0.00 0.00 42.12 3.46
1030 1058 3.141398 GACTTCACCAAGCACTTCATCA 58.859 45.455 0.00 0.00 32.09 3.07
1138 1166 2.121689 AGGGTTGGGCCACCTACA 60.122 61.111 13.77 0.00 43.22 2.74
1153 1181 1.645034 CTACACAGCCGTTCATCAGG 58.355 55.000 0.00 0.00 0.00 3.86
1240 1270 0.612744 TGACGATGGCATTGAGGTCA 59.387 50.000 21.46 18.03 32.51 4.02
1290 1320 3.400054 GCCGCCAAGGAGTAGGGT 61.400 66.667 0.00 0.00 45.00 4.34
1449 1479 2.203139 TGCCGAAGTGTGGTGGTG 60.203 61.111 0.00 0.00 0.00 4.17
1537 1567 2.625790 GGGTTTGTGGACTAACATGCAA 59.374 45.455 0.00 0.00 34.16 4.08
1566 1598 0.751277 CACCAGGCAGTGTGGTTCAA 60.751 55.000 2.70 0.00 46.73 2.69
1576 1609 0.184692 TGTGGTTCAACCCATGCAGA 59.815 50.000 3.42 0.00 37.50 4.26
1591 1624 1.144298 TGCAGATAAGAGGGCATGCAT 59.856 47.619 21.36 7.26 38.64 3.96
1677 1710 0.463620 TGTATGCGATGCAGGCACTA 59.536 50.000 16.42 8.41 43.65 2.74
1706 1739 0.601057 GCAACCAAACACGCCCTTAT 59.399 50.000 0.00 0.00 0.00 1.73
1707 1740 1.813786 GCAACCAAACACGCCCTTATA 59.186 47.619 0.00 0.00 0.00 0.98
1708 1741 2.414957 GCAACCAAACACGCCCTTATAC 60.415 50.000 0.00 0.00 0.00 1.47
1709 1742 2.814919 CAACCAAACACGCCCTTATACA 59.185 45.455 0.00 0.00 0.00 2.29
1710 1743 2.706890 ACCAAACACGCCCTTATACAG 58.293 47.619 0.00 0.00 0.00 2.74
1711 1744 2.039348 ACCAAACACGCCCTTATACAGT 59.961 45.455 0.00 0.00 0.00 3.55
1712 1745 3.078837 CCAAACACGCCCTTATACAGTT 58.921 45.455 0.00 0.00 0.00 3.16
1713 1746 4.255301 CCAAACACGCCCTTATACAGTTA 58.745 43.478 0.00 0.00 0.00 2.24
1714 1747 4.331717 CCAAACACGCCCTTATACAGTTAG 59.668 45.833 0.00 0.00 0.00 2.34
1715 1748 3.175109 ACACGCCCTTATACAGTTAGC 57.825 47.619 0.00 0.00 0.00 3.09
1716 1749 2.764572 ACACGCCCTTATACAGTTAGCT 59.235 45.455 0.00 0.00 0.00 3.32
1717 1750 3.197116 ACACGCCCTTATACAGTTAGCTT 59.803 43.478 0.00 0.00 0.00 3.74
1718 1751 4.403432 ACACGCCCTTATACAGTTAGCTTA 59.597 41.667 0.00 0.00 0.00 3.09
1719 1752 4.982916 CACGCCCTTATACAGTTAGCTTAG 59.017 45.833 0.00 0.00 0.00 2.18
1720 1753 3.988517 CGCCCTTATACAGTTAGCTTAGC 59.011 47.826 0.00 0.00 0.00 3.09
1721 1754 4.262079 CGCCCTTATACAGTTAGCTTAGCT 60.262 45.833 12.67 12.67 43.41 3.32
1722 1755 5.231702 GCCCTTATACAGTTAGCTTAGCTC 58.768 45.833 11.09 0.00 40.44 4.09
1723 1756 5.462405 CCCTTATACAGTTAGCTTAGCTCG 58.538 45.833 11.09 0.41 40.44 5.03
1724 1757 4.918583 CCTTATACAGTTAGCTTAGCTCGC 59.081 45.833 11.09 4.84 40.44 5.03
1725 1758 5.507482 CCTTATACAGTTAGCTTAGCTCGCA 60.507 44.000 11.09 0.00 40.44 5.10
1726 1759 2.969628 ACAGTTAGCTTAGCTCGCAT 57.030 45.000 11.09 0.00 40.44 4.73
1727 1760 3.252974 ACAGTTAGCTTAGCTCGCATT 57.747 42.857 11.09 0.00 40.44 3.56
1728 1761 4.386867 ACAGTTAGCTTAGCTCGCATTA 57.613 40.909 11.09 0.00 40.44 1.90
1729 1762 4.755411 ACAGTTAGCTTAGCTCGCATTAA 58.245 39.130 11.09 0.00 40.44 1.40
1730 1763 5.175859 ACAGTTAGCTTAGCTCGCATTAAA 58.824 37.500 11.09 0.00 40.44 1.52
1731 1764 5.642063 ACAGTTAGCTTAGCTCGCATTAAAA 59.358 36.000 11.09 0.00 40.44 1.52
1732 1765 6.316390 ACAGTTAGCTTAGCTCGCATTAAAAT 59.684 34.615 11.09 0.00 40.44 1.82
1733 1766 7.148239 ACAGTTAGCTTAGCTCGCATTAAAATT 60.148 33.333 11.09 0.00 40.44 1.82
1734 1767 7.374491 CAGTTAGCTTAGCTCGCATTAAAATTC 59.626 37.037 11.09 0.00 40.44 2.17
1735 1768 7.281100 AGTTAGCTTAGCTCGCATTAAAATTCT 59.719 33.333 11.09 0.00 40.44 2.40
1736 1769 8.548721 GTTAGCTTAGCTCGCATTAAAATTCTA 58.451 33.333 11.09 0.00 40.44 2.10
1737 1770 7.183580 AGCTTAGCTCGCATTAAAATTCTAG 57.816 36.000 0.00 0.00 30.62 2.43
1738 1771 5.848559 GCTTAGCTCGCATTAAAATTCTAGC 59.151 40.000 0.00 0.00 0.00 3.42
1739 1772 4.458951 AGCTCGCATTAAAATTCTAGCG 57.541 40.909 0.00 0.00 45.79 4.26
1744 1777 4.820284 GCATTAAAATTCTAGCGAGCCT 57.180 40.909 0.00 0.00 0.00 4.58
1745 1778 5.924475 GCATTAAAATTCTAGCGAGCCTA 57.076 39.130 0.00 0.00 0.00 3.93
1746 1779 5.921429 GCATTAAAATTCTAGCGAGCCTAG 58.079 41.667 0.00 0.00 44.09 3.02
1750 1783 4.458666 TCTAGCGAGCCTAGACCG 57.541 61.111 0.00 0.00 45.87 4.79
1751 1784 1.828081 TCTAGCGAGCCTAGACCGA 59.172 57.895 0.00 0.00 45.87 4.69
1752 1785 0.249953 TCTAGCGAGCCTAGACCGAG 60.250 60.000 0.00 0.00 45.87 4.63
1753 1786 0.533308 CTAGCGAGCCTAGACCGAGT 60.533 60.000 0.00 0.00 45.30 4.18
1754 1787 0.532417 TAGCGAGCCTAGACCGAGTC 60.532 60.000 0.00 0.00 0.00 3.36
1755 1788 1.820481 GCGAGCCTAGACCGAGTCT 60.820 63.158 10.71 10.71 45.54 3.24
1756 1789 0.532417 GCGAGCCTAGACCGAGTCTA 60.532 60.000 11.64 11.64 41.51 2.59
1757 1790 1.950828 CGAGCCTAGACCGAGTCTAA 58.049 55.000 12.77 1.45 43.36 2.10
1758 1791 1.868498 CGAGCCTAGACCGAGTCTAAG 59.132 57.143 12.77 9.20 43.36 2.18
1759 1792 2.742530 CGAGCCTAGACCGAGTCTAAGT 60.743 54.545 12.77 3.54 43.36 2.24
1760 1793 3.281158 GAGCCTAGACCGAGTCTAAGTT 58.719 50.000 12.77 6.88 43.36 2.66
1761 1794 4.450053 GAGCCTAGACCGAGTCTAAGTTA 58.550 47.826 12.77 0.00 43.36 2.24
1762 1795 4.853007 AGCCTAGACCGAGTCTAAGTTAA 58.147 43.478 12.77 0.00 43.36 2.01
1763 1796 4.883006 AGCCTAGACCGAGTCTAAGTTAAG 59.117 45.833 12.77 4.59 43.36 1.85
1764 1797 4.036616 GCCTAGACCGAGTCTAAGTTAAGG 59.963 50.000 12.77 11.90 43.36 2.69
1765 1798 4.579753 CCTAGACCGAGTCTAAGTTAAGGG 59.420 50.000 12.77 6.91 43.36 3.95
1766 1799 4.044946 AGACCGAGTCTAAGTTAAGGGT 57.955 45.455 4.93 0.00 41.51 4.34
1767 1800 4.015764 AGACCGAGTCTAAGTTAAGGGTC 58.984 47.826 4.93 0.00 41.51 4.46
1768 1801 2.751806 ACCGAGTCTAAGTTAAGGGTCG 59.248 50.000 0.00 0.00 0.00 4.79
1769 1802 3.012518 CCGAGTCTAAGTTAAGGGTCGA 58.987 50.000 0.00 0.00 0.00 4.20
1770 1803 3.065095 CCGAGTCTAAGTTAAGGGTCGAG 59.935 52.174 0.00 0.00 0.00 4.04
1771 1804 3.065095 CGAGTCTAAGTTAAGGGTCGAGG 59.935 52.174 0.00 0.00 0.00 4.63
1772 1805 4.015764 GAGTCTAAGTTAAGGGTCGAGGT 58.984 47.826 0.00 0.00 0.00 3.85
1773 1806 3.762823 AGTCTAAGTTAAGGGTCGAGGTG 59.237 47.826 0.00 0.00 0.00 4.00
1774 1807 3.509184 GTCTAAGTTAAGGGTCGAGGTGT 59.491 47.826 0.00 0.00 0.00 4.16
1775 1808 2.833631 AAGTTAAGGGTCGAGGTGTG 57.166 50.000 0.00 0.00 0.00 3.82
1776 1809 0.974383 AGTTAAGGGTCGAGGTGTGG 59.026 55.000 0.00 0.00 0.00 4.17
1777 1810 0.971386 GTTAAGGGTCGAGGTGTGGA 59.029 55.000 0.00 0.00 0.00 4.02
1778 1811 1.345415 GTTAAGGGTCGAGGTGTGGAA 59.655 52.381 0.00 0.00 0.00 3.53
1779 1812 1.719529 TAAGGGTCGAGGTGTGGAAA 58.280 50.000 0.00 0.00 0.00 3.13
1780 1813 0.841289 AAGGGTCGAGGTGTGGAAAA 59.159 50.000 0.00 0.00 0.00 2.29
1781 1814 1.064825 AGGGTCGAGGTGTGGAAAAT 58.935 50.000 0.00 0.00 0.00 1.82
1782 1815 1.165270 GGGTCGAGGTGTGGAAAATG 58.835 55.000 0.00 0.00 0.00 2.32
1783 1816 1.165270 GGTCGAGGTGTGGAAAATGG 58.835 55.000 0.00 0.00 0.00 3.16
1784 1817 0.521735 GTCGAGGTGTGGAAAATGGC 59.478 55.000 0.00 0.00 0.00 4.40
1785 1818 0.400213 TCGAGGTGTGGAAAATGGCT 59.600 50.000 0.00 0.00 0.00 4.75
1786 1819 1.202879 TCGAGGTGTGGAAAATGGCTT 60.203 47.619 0.00 0.00 0.00 4.35
1787 1820 1.200020 CGAGGTGTGGAAAATGGCTTC 59.800 52.381 0.00 0.00 0.00 3.86
1788 1821 2.519013 GAGGTGTGGAAAATGGCTTCT 58.481 47.619 0.00 0.00 0.00 2.85
1789 1822 2.229784 GAGGTGTGGAAAATGGCTTCTG 59.770 50.000 0.00 0.00 0.00 3.02
1790 1823 2.158475 AGGTGTGGAAAATGGCTTCTGA 60.158 45.455 0.00 0.00 0.00 3.27
1791 1824 2.029918 GGTGTGGAAAATGGCTTCTGAC 60.030 50.000 0.00 0.00 0.00 3.51
1792 1825 2.029918 GTGTGGAAAATGGCTTCTGACC 60.030 50.000 0.00 0.00 0.00 4.02
1793 1826 2.238521 GTGGAAAATGGCTTCTGACCA 58.761 47.619 0.00 0.00 42.61 4.02
1794 1827 2.627699 GTGGAAAATGGCTTCTGACCAA 59.372 45.455 0.00 0.00 41.49 3.67
1795 1828 2.627699 TGGAAAATGGCTTCTGACCAAC 59.372 45.455 0.00 0.00 41.49 3.77
1796 1829 2.893489 GGAAAATGGCTTCTGACCAACT 59.107 45.455 0.00 0.00 41.49 3.16
1797 1830 3.321968 GGAAAATGGCTTCTGACCAACTT 59.678 43.478 0.00 0.00 41.49 2.66
1798 1831 4.522789 GGAAAATGGCTTCTGACCAACTTA 59.477 41.667 0.00 0.00 41.49 2.24
1799 1832 5.185828 GGAAAATGGCTTCTGACCAACTTAT 59.814 40.000 0.00 0.00 41.49 1.73
1800 1833 6.377146 GGAAAATGGCTTCTGACCAACTTATA 59.623 38.462 0.00 0.00 41.49 0.98
1801 1834 7.093945 GGAAAATGGCTTCTGACCAACTTATAA 60.094 37.037 0.00 0.00 41.49 0.98
1802 1835 6.759497 AATGGCTTCTGACCAACTTATAAC 57.241 37.500 0.00 0.00 41.49 1.89
1803 1836 5.235850 TGGCTTCTGACCAACTTATAACA 57.764 39.130 0.00 0.00 33.12 2.41
1804 1837 5.626142 TGGCTTCTGACCAACTTATAACAA 58.374 37.500 0.00 0.00 33.12 2.83
1805 1838 6.245408 TGGCTTCTGACCAACTTATAACAAT 58.755 36.000 0.00 0.00 33.12 2.71
1806 1839 6.374333 TGGCTTCTGACCAACTTATAACAATC 59.626 38.462 0.00 0.00 33.12 2.67
1807 1840 6.599638 GGCTTCTGACCAACTTATAACAATCT 59.400 38.462 0.00 0.00 0.00 2.40
1808 1841 7.201652 GGCTTCTGACCAACTTATAACAATCTC 60.202 40.741 0.00 0.00 0.00 2.75
1809 1842 7.550906 GCTTCTGACCAACTTATAACAATCTCT 59.449 37.037 0.00 0.00 0.00 3.10
1812 1845 8.198109 TCTGACCAACTTATAACAATCTCTAGC 58.802 37.037 0.00 0.00 0.00 3.42
1813 1846 8.079211 TGACCAACTTATAACAATCTCTAGCT 57.921 34.615 0.00 0.00 0.00 3.32
1814 1847 9.197306 TGACCAACTTATAACAATCTCTAGCTA 57.803 33.333 0.00 0.00 0.00 3.32
1815 1848 9.685828 GACCAACTTATAACAATCTCTAGCTAG 57.314 37.037 15.01 15.01 0.00 3.42
1816 1849 9.203163 ACCAACTTATAACAATCTCTAGCTAGT 57.797 33.333 20.10 1.91 0.00 2.57
1820 1853 9.953697 ACTTATAACAATCTCTAGCTAGTTTCG 57.046 33.333 20.10 9.04 0.00 3.46
1823 1856 4.927422 ACAATCTCTAGCTAGTTTCGAGC 58.073 43.478 20.10 0.00 40.42 5.03
1824 1857 4.399618 ACAATCTCTAGCTAGTTTCGAGCA 59.600 41.667 20.10 0.00 42.69 4.26
1825 1858 5.105716 ACAATCTCTAGCTAGTTTCGAGCAA 60.106 40.000 20.10 0.00 42.69 3.91
1826 1859 5.584253 ATCTCTAGCTAGTTTCGAGCAAA 57.416 39.130 20.10 0.00 42.69 3.68
1827 1860 5.386958 TCTCTAGCTAGTTTCGAGCAAAA 57.613 39.130 20.10 0.00 42.69 2.44
1828 1861 5.403246 TCTCTAGCTAGTTTCGAGCAAAAG 58.597 41.667 20.10 6.05 42.69 2.27
1829 1862 5.183331 TCTCTAGCTAGTTTCGAGCAAAAGA 59.817 40.000 20.10 8.25 42.69 2.52
1830 1863 5.967088 TCTAGCTAGTTTCGAGCAAAAGAT 58.033 37.500 20.10 0.00 42.69 2.40
1831 1864 4.935885 AGCTAGTTTCGAGCAAAAGATG 57.064 40.909 4.89 0.00 42.69 2.90
1832 1865 4.569943 AGCTAGTTTCGAGCAAAAGATGA 58.430 39.130 4.89 0.00 42.69 2.92
1833 1866 5.181748 AGCTAGTTTCGAGCAAAAGATGAT 58.818 37.500 4.89 0.00 42.69 2.45
1834 1867 5.064452 AGCTAGTTTCGAGCAAAAGATGATG 59.936 40.000 4.89 0.00 42.69 3.07
1835 1868 5.063944 GCTAGTTTCGAGCAAAAGATGATGA 59.936 40.000 0.00 0.00 39.84 2.92
1836 1869 5.288543 AGTTTCGAGCAAAAGATGATGAC 57.711 39.130 0.00 0.00 0.00 3.06
1837 1870 4.756642 AGTTTCGAGCAAAAGATGATGACA 59.243 37.500 0.00 0.00 0.00 3.58
1838 1871 5.239306 AGTTTCGAGCAAAAGATGATGACAA 59.761 36.000 0.00 0.00 0.00 3.18
1839 1872 4.668576 TCGAGCAAAAGATGATGACAAC 57.331 40.909 0.00 0.00 0.00 3.32
1840 1873 3.436704 TCGAGCAAAAGATGATGACAACC 59.563 43.478 0.00 0.00 0.00 3.77
1841 1874 3.438087 CGAGCAAAAGATGATGACAACCT 59.562 43.478 0.00 0.00 0.00 3.50
1842 1875 4.083110 CGAGCAAAAGATGATGACAACCTT 60.083 41.667 0.00 0.00 0.00 3.50
1843 1876 5.130292 AGCAAAAGATGATGACAACCTTG 57.870 39.130 0.00 0.00 0.00 3.61
1844 1877 4.586001 AGCAAAAGATGATGACAACCTTGT 59.414 37.500 0.00 0.00 45.65 3.16
1845 1878 5.069516 AGCAAAAGATGATGACAACCTTGTT 59.930 36.000 0.00 0.00 42.43 2.83
1846 1879 5.754890 GCAAAAGATGATGACAACCTTGTTT 59.245 36.000 0.00 0.00 42.43 2.83
1847 1880 6.922957 GCAAAAGATGATGACAACCTTGTTTA 59.077 34.615 0.00 0.00 42.43 2.01
1848 1881 7.599998 GCAAAAGATGATGACAACCTTGTTTAT 59.400 33.333 0.00 0.00 42.43 1.40
1849 1882 9.132521 CAAAAGATGATGACAACCTTGTTTATC 57.867 33.333 8.38 8.38 42.43 1.75
1850 1883 8.641498 AAAGATGATGACAACCTTGTTTATCT 57.359 30.769 13.22 5.31 42.43 1.98
1851 1884 7.621428 AGATGATGACAACCTTGTTTATCTG 57.379 36.000 13.22 0.00 42.43 2.90
1852 1885 7.170965 AGATGATGACAACCTTGTTTATCTGT 58.829 34.615 13.22 0.00 42.43 3.41
1853 1886 6.558771 TGATGACAACCTTGTTTATCTGTG 57.441 37.500 13.22 0.00 42.43 3.66
1854 1887 5.473162 TGATGACAACCTTGTTTATCTGTGG 59.527 40.000 13.22 0.00 42.43 4.17
1855 1888 3.568007 TGACAACCTTGTTTATCTGTGGC 59.432 43.478 0.00 0.00 42.43 5.01
1856 1889 2.552315 ACAACCTTGTTTATCTGTGGCG 59.448 45.455 0.00 0.00 38.47 5.69
1857 1890 2.811431 CAACCTTGTTTATCTGTGGCGA 59.189 45.455 0.00 0.00 0.00 5.54
1858 1891 2.699954 ACCTTGTTTATCTGTGGCGAG 58.300 47.619 0.00 0.00 0.00 5.03
1859 1892 2.038557 ACCTTGTTTATCTGTGGCGAGT 59.961 45.455 0.00 0.00 0.00 4.18
1860 1893 2.673368 CCTTGTTTATCTGTGGCGAGTC 59.327 50.000 0.00 0.00 0.00 3.36
1861 1894 2.380084 TGTTTATCTGTGGCGAGTCC 57.620 50.000 0.00 0.00 0.00 3.85
1862 1895 1.899814 TGTTTATCTGTGGCGAGTCCT 59.100 47.619 0.00 0.00 35.26 3.85
1863 1896 2.301870 TGTTTATCTGTGGCGAGTCCTT 59.698 45.455 0.00 0.00 35.26 3.36
1864 1897 2.930682 GTTTATCTGTGGCGAGTCCTTC 59.069 50.000 0.00 0.00 35.26 3.46
1884 1917 9.745880 GTCCTTCGACTAAATATGATACAAGAA 57.254 33.333 0.00 0.00 35.99 2.52
1885 1918 9.745880 TCCTTCGACTAAATATGATACAAGAAC 57.254 33.333 0.00 0.00 0.00 3.01
1886 1919 9.529325 CCTTCGACTAAATATGATACAAGAACA 57.471 33.333 0.00 0.00 0.00 3.18
1900 1933 9.283768 TGATACAAGAACATACATTGAAACACT 57.716 29.630 0.00 0.00 0.00 3.55
1978 2011 9.435570 AGAGTAGTTTAGCTTATTATCCCTCAA 57.564 33.333 0.00 0.00 0.00 3.02
1979 2012 9.478768 GAGTAGTTTAGCTTATTATCCCTCAAC 57.521 37.037 0.00 0.00 0.00 3.18
1980 2013 9.214962 AGTAGTTTAGCTTATTATCCCTCAACT 57.785 33.333 0.00 0.00 0.00 3.16
1981 2014 9.478768 GTAGTTTAGCTTATTATCCCTCAACTC 57.521 37.037 0.00 0.00 0.00 3.01
1982 2015 8.090788 AGTTTAGCTTATTATCCCTCAACTCA 57.909 34.615 0.00 0.00 0.00 3.41
1983 2016 8.718656 AGTTTAGCTTATTATCCCTCAACTCAT 58.281 33.333 0.00 0.00 0.00 2.90
1984 2017 9.998106 GTTTAGCTTATTATCCCTCAACTCATA 57.002 33.333 0.00 0.00 0.00 2.15
2021 2054 5.957842 TGGAACACAATACAAGGATTCAC 57.042 39.130 0.00 0.00 0.00 3.18
2022 2055 5.630121 TGGAACACAATACAAGGATTCACT 58.370 37.500 0.00 0.00 0.00 3.41
2023 2056 6.774673 TGGAACACAATACAAGGATTCACTA 58.225 36.000 0.00 0.00 0.00 2.74
2024 2057 6.653320 TGGAACACAATACAAGGATTCACTAC 59.347 38.462 0.00 0.00 0.00 2.73
2025 2058 6.653320 GGAACACAATACAAGGATTCACTACA 59.347 38.462 0.00 0.00 0.00 2.74
2026 2059 7.174253 GGAACACAATACAAGGATTCACTACAA 59.826 37.037 0.00 0.00 0.00 2.41
2027 2060 8.458573 AACACAATACAAGGATTCACTACAAA 57.541 30.769 0.00 0.00 0.00 2.83
2028 2061 7.871853 ACACAATACAAGGATTCACTACAAAC 58.128 34.615 0.00 0.00 0.00 2.93
2029 2062 7.500892 ACACAATACAAGGATTCACTACAAACA 59.499 33.333 0.00 0.00 0.00 2.83
2030 2063 8.514594 CACAATACAAGGATTCACTACAAACAT 58.485 33.333 0.00 0.00 0.00 2.71
2031 2064 9.077885 ACAATACAAGGATTCACTACAAACATT 57.922 29.630 0.00 0.00 0.00 2.71
2032 2065 9.912634 CAATACAAGGATTCACTACAAACATTT 57.087 29.630 0.00 0.00 0.00 2.32
2038 2071 9.927668 AAGGATTCACTACAAACATTTAATTGG 57.072 29.630 2.66 0.00 0.00 3.16
2039 2072 8.531146 AGGATTCACTACAAACATTTAATTGGG 58.469 33.333 2.66 0.00 0.00 4.12
2040 2073 8.527810 GGATTCACTACAAACATTTAATTGGGA 58.472 33.333 2.66 0.00 0.00 4.37
2061 2094 9.983024 TTGGGATAACAAAATATAGTCCAAAGA 57.017 29.630 0.00 0.00 0.00 2.52
2062 2095 9.403583 TGGGATAACAAAATATAGTCCAAAGAC 57.596 33.333 0.00 0.00 43.89 3.01
2063 2096 8.847196 GGGATAACAAAATATAGTCCAAAGACC 58.153 37.037 0.00 0.00 44.72 3.85
2064 2097 9.403583 GGATAACAAAATATAGTCCAAAGACCA 57.596 33.333 0.00 0.00 44.72 4.02
2076 2109 7.219484 AGTCCAAAGACCATAAAATGTTCTG 57.781 36.000 0.00 0.00 44.72 3.02
2077 2110 6.209391 AGTCCAAAGACCATAAAATGTTCTGG 59.791 38.462 0.00 0.00 44.72 3.86
2078 2111 5.047377 TCCAAAGACCATAAAATGTTCTGGC 60.047 40.000 0.00 0.00 34.97 4.85
2079 2112 4.701956 AAGACCATAAAATGTTCTGGCG 57.298 40.909 0.00 0.00 34.97 5.69
2080 2113 3.686016 AGACCATAAAATGTTCTGGCGT 58.314 40.909 0.00 0.00 34.97 5.68
2081 2114 4.839121 AGACCATAAAATGTTCTGGCGTA 58.161 39.130 0.00 0.00 34.97 4.42
2082 2115 4.876107 AGACCATAAAATGTTCTGGCGTAG 59.124 41.667 0.00 0.00 34.97 3.51
2083 2116 4.585879 ACCATAAAATGTTCTGGCGTAGT 58.414 39.130 0.00 0.00 34.97 2.73
2084 2117 4.394920 ACCATAAAATGTTCTGGCGTAGTG 59.605 41.667 0.00 0.00 34.97 2.74
2085 2118 2.989422 AAAATGTTCTGGCGTAGTGC 57.011 45.000 0.00 0.00 45.38 4.40
2096 2129 2.004583 GCGTAGTGCACTGTAATGGA 57.995 50.000 29.57 4.12 45.45 3.41
2097 2130 2.550978 GCGTAGTGCACTGTAATGGAT 58.449 47.619 29.57 1.79 45.45 3.41
2098 2131 2.285220 GCGTAGTGCACTGTAATGGATG 59.715 50.000 29.57 13.50 45.45 3.51
2099 2132 2.285220 CGTAGTGCACTGTAATGGATGC 59.715 50.000 29.57 2.21 38.59 3.91
2100 2133 1.755179 AGTGCACTGTAATGGATGCC 58.245 50.000 20.97 0.00 37.26 4.40
2101 2134 1.004628 AGTGCACTGTAATGGATGCCA 59.995 47.619 20.97 0.00 37.26 4.92
2102 2135 1.818060 GTGCACTGTAATGGATGCCAA 59.182 47.619 10.32 0.00 36.95 4.52
2103 2136 2.093890 TGCACTGTAATGGATGCCAAG 58.906 47.619 0.00 0.00 36.95 3.61
2104 2137 1.202336 GCACTGTAATGGATGCCAAGC 60.202 52.381 0.00 0.00 36.95 4.01
2105 2138 1.064505 CACTGTAATGGATGCCAAGCG 59.935 52.381 0.00 0.00 36.95 4.68
2106 2139 1.065491 ACTGTAATGGATGCCAAGCGA 60.065 47.619 0.00 0.00 36.95 4.93
2107 2140 2.016318 CTGTAATGGATGCCAAGCGAA 58.984 47.619 0.00 0.00 36.95 4.70
2108 2141 2.423185 CTGTAATGGATGCCAAGCGAAA 59.577 45.455 0.00 0.00 36.95 3.46
2109 2142 2.822561 TGTAATGGATGCCAAGCGAAAA 59.177 40.909 0.00 0.00 36.95 2.29
2110 2143 3.446873 TGTAATGGATGCCAAGCGAAAAT 59.553 39.130 0.00 0.00 36.95 1.82
2111 2144 2.877043 ATGGATGCCAAGCGAAAATC 57.123 45.000 0.00 0.00 36.95 2.17
2112 2145 0.451383 TGGATGCCAAGCGAAAATCG 59.549 50.000 0.00 0.00 43.89 3.34
2113 2146 0.732571 GGATGCCAAGCGAAAATCGA 59.267 50.000 3.61 0.00 43.74 3.59
2114 2147 1.268234 GGATGCCAAGCGAAAATCGAG 60.268 52.381 3.61 0.00 43.74 4.04
2115 2148 0.099436 ATGCCAAGCGAAAATCGAGC 59.901 50.000 3.61 1.37 43.74 5.03
2116 2149 1.581147 GCCAAGCGAAAATCGAGCG 60.581 57.895 3.61 0.00 43.74 5.03
2117 2150 1.966493 GCCAAGCGAAAATCGAGCGA 61.966 55.000 3.61 0.00 43.74 4.93
2118 2151 0.025513 CCAAGCGAAAATCGAGCGAG 59.974 55.000 3.61 0.00 43.74 5.03
2119 2152 0.585029 CAAGCGAAAATCGAGCGAGC 60.585 55.000 3.61 0.00 43.74 5.03
2120 2153 0.737715 AAGCGAAAATCGAGCGAGCT 60.738 50.000 3.61 0.00 43.74 4.09
2121 2154 1.142778 AGCGAAAATCGAGCGAGCTC 61.143 55.000 14.61 14.61 43.74 4.09
2131 2164 2.319241 GAGCGAGCTCGTATTACCTC 57.681 55.000 34.46 25.87 42.22 3.85
2132 2165 1.602851 GAGCGAGCTCGTATTACCTCA 59.397 52.381 34.46 0.00 42.22 3.86
2133 2166 2.226912 GAGCGAGCTCGTATTACCTCAT 59.773 50.000 34.46 9.97 42.22 2.90
2134 2167 2.030717 AGCGAGCTCGTATTACCTCATG 60.031 50.000 34.46 5.04 42.22 3.07
2135 2168 2.320367 CGAGCTCGTATTACCTCATGC 58.680 52.381 27.79 0.00 34.11 4.06
2136 2169 2.030717 CGAGCTCGTATTACCTCATGCT 60.031 50.000 27.79 0.00 34.11 3.79
2137 2170 3.570559 GAGCTCGTATTACCTCATGCTC 58.429 50.000 0.00 0.00 38.77 4.26
2138 2171 2.030717 AGCTCGTATTACCTCATGCTCG 60.031 50.000 0.00 0.00 0.00 5.03
2139 2172 2.922758 GCTCGTATTACCTCATGCTCGG 60.923 54.545 0.00 0.00 0.00 4.63
2140 2173 1.000607 TCGTATTACCTCATGCTCGGC 60.001 52.381 0.00 0.00 0.00 5.54
2141 2174 1.000163 CGTATTACCTCATGCTCGGCT 60.000 52.381 0.00 0.00 0.00 5.52
2142 2175 2.678324 GTATTACCTCATGCTCGGCTC 58.322 52.381 0.00 0.00 0.00 4.70
2143 2176 0.032678 ATTACCTCATGCTCGGCTCG 59.967 55.000 0.00 0.00 0.00 5.03
2144 2177 2.629050 TTACCTCATGCTCGGCTCGC 62.629 60.000 0.00 0.00 0.00 5.03
2145 2178 4.218578 CCTCATGCTCGGCTCGCT 62.219 66.667 0.00 0.00 0.00 4.93
2146 2179 2.202851 CTCATGCTCGGCTCGCTT 60.203 61.111 0.00 0.00 0.00 4.68
2147 2180 2.202797 TCATGCTCGGCTCGCTTC 60.203 61.111 0.00 0.00 0.00 3.86
2148 2181 3.267860 CATGCTCGGCTCGCTTCC 61.268 66.667 0.00 0.00 0.00 3.46
2149 2182 4.537433 ATGCTCGGCTCGCTTCCC 62.537 66.667 0.00 0.00 0.00 3.97
2157 2190 3.441290 CTCGCTTCCCGGTCGAGT 61.441 66.667 18.43 0.00 43.16 4.18
2158 2191 3.398353 CTCGCTTCCCGGTCGAGTC 62.398 68.421 18.43 3.68 43.16 3.36
2159 2192 3.744719 CGCTTCCCGGTCGAGTCA 61.745 66.667 0.00 0.00 0.00 3.41
2160 2193 2.126031 GCTTCCCGGTCGAGTCAC 60.126 66.667 0.00 0.00 0.00 3.67
2161 2194 2.927580 GCTTCCCGGTCGAGTCACA 61.928 63.158 0.00 0.00 0.00 3.58
2162 2195 1.080705 CTTCCCGGTCGAGTCACAC 60.081 63.158 0.00 0.00 0.00 3.82
2163 2196 1.802337 CTTCCCGGTCGAGTCACACA 61.802 60.000 0.00 0.00 0.00 3.72
2164 2197 1.183030 TTCCCGGTCGAGTCACACAT 61.183 55.000 0.00 0.00 0.00 3.21
2165 2198 0.322726 TCCCGGTCGAGTCACACATA 60.323 55.000 0.00 0.00 0.00 2.29
2166 2199 0.528924 CCCGGTCGAGTCACACATAA 59.471 55.000 0.00 0.00 0.00 1.90
2167 2200 1.067425 CCCGGTCGAGTCACACATAAA 60.067 52.381 0.00 0.00 0.00 1.40
2168 2201 1.990563 CCGGTCGAGTCACACATAAAC 59.009 52.381 0.00 0.00 0.00 2.01
2169 2202 2.608506 CCGGTCGAGTCACACATAAACA 60.609 50.000 0.00 0.00 0.00 2.83
2170 2203 3.250744 CGGTCGAGTCACACATAAACAT 58.749 45.455 0.00 0.00 0.00 2.71
2171 2204 3.678072 CGGTCGAGTCACACATAAACATT 59.322 43.478 0.00 0.00 0.00 2.71
2172 2205 4.201589 CGGTCGAGTCACACATAAACATTC 60.202 45.833 0.00 0.00 0.00 2.67
2173 2206 4.688879 GGTCGAGTCACACATAAACATTCA 59.311 41.667 0.00 0.00 0.00 2.57
2174 2207 5.163953 GGTCGAGTCACACATAAACATTCAG 60.164 44.000 0.00 0.00 0.00 3.02
2175 2208 5.633601 GTCGAGTCACACATAAACATTCAGA 59.366 40.000 0.00 0.00 0.00 3.27
2176 2209 5.633601 TCGAGTCACACATAAACATTCAGAC 59.366 40.000 0.00 0.00 0.00 3.51
2177 2210 5.635280 CGAGTCACACATAAACATTCAGACT 59.365 40.000 0.00 0.00 36.61 3.24
2178 2211 6.146184 CGAGTCACACATAAACATTCAGACTT 59.854 38.462 0.00 0.00 34.31 3.01
2179 2212 7.194607 AGTCACACATAAACATTCAGACTTG 57.805 36.000 0.00 0.00 30.32 3.16
2180 2213 6.992123 AGTCACACATAAACATTCAGACTTGA 59.008 34.615 0.00 0.00 30.32 3.02
2181 2214 7.041780 AGTCACACATAAACATTCAGACTTGAC 60.042 37.037 0.00 0.00 31.71 3.18
2182 2215 6.992123 TCACACATAAACATTCAGACTTGACT 59.008 34.615 0.00 0.00 31.71 3.41
2183 2216 7.171508 TCACACATAAACATTCAGACTTGACTC 59.828 37.037 0.00 0.00 31.71 3.36
2184 2217 6.992123 ACACATAAACATTCAGACTTGACTCA 59.008 34.615 0.00 0.00 31.71 3.41
2185 2218 7.663081 ACACATAAACATTCAGACTTGACTCAT 59.337 33.333 0.00 0.00 31.71 2.90
2186 2219 8.509690 CACATAAACATTCAGACTTGACTCATT 58.490 33.333 0.00 0.00 31.71 2.57
2187 2220 9.071276 ACATAAACATTCAGACTTGACTCATTT 57.929 29.630 0.00 0.00 31.71 2.32
2188 2221 9.903682 CATAAACATTCAGACTTGACTCATTTT 57.096 29.630 0.00 0.00 31.71 1.82
2194 2227 9.270576 CATTCAGACTTGACTCATTTTATTTCG 57.729 33.333 0.00 0.00 31.71 3.46
2195 2228 8.601845 TTCAGACTTGACTCATTTTATTTCGA 57.398 30.769 0.00 0.00 31.71 3.71
2196 2229 8.244494 TCAGACTTGACTCATTTTATTTCGAG 57.756 34.615 0.00 0.00 0.00 4.04
2197 2230 7.872993 TCAGACTTGACTCATTTTATTTCGAGT 59.127 33.333 0.00 0.00 41.32 4.18
2202 2235 6.022217 GACTCATTTTATTTCGAGTCGACC 57.978 41.667 16.28 2.76 43.42 4.79
2203 2236 5.721232 ACTCATTTTATTTCGAGTCGACCT 58.279 37.500 16.28 8.00 33.49 3.85
2204 2237 5.805994 ACTCATTTTATTTCGAGTCGACCTC 59.194 40.000 16.28 8.35 33.49 3.85
2214 2247 2.035155 TCGACCTCGAAGGGCTCA 59.965 61.111 5.40 0.00 42.96 4.26
2215 2248 2.182030 CGACCTCGAAGGGCTCAC 59.818 66.667 5.40 0.00 42.96 3.51
2216 2249 2.636412 CGACCTCGAAGGGCTCACA 61.636 63.158 5.40 0.00 42.96 3.58
2217 2250 1.671742 GACCTCGAAGGGCTCACAA 59.328 57.895 5.98 0.00 41.45 3.33
2218 2251 0.390472 GACCTCGAAGGGCTCACAAG 60.390 60.000 5.98 0.00 41.45 3.16
2227 2260 4.809070 GCTCACAAGCCTCAACCT 57.191 55.556 0.00 0.00 43.10 3.50
2228 2261 2.549332 GCTCACAAGCCTCAACCTC 58.451 57.895 0.00 0.00 43.10 3.85
2229 2262 0.036022 GCTCACAAGCCTCAACCTCT 59.964 55.000 0.00 0.00 43.10 3.69
2230 2263 1.544314 GCTCACAAGCCTCAACCTCTT 60.544 52.381 0.00 0.00 43.10 2.85
2231 2264 2.421619 CTCACAAGCCTCAACCTCTTC 58.578 52.381 0.00 0.00 0.00 2.87
2232 2265 2.038295 CTCACAAGCCTCAACCTCTTCT 59.962 50.000 0.00 0.00 0.00 2.85
2233 2266 2.439507 TCACAAGCCTCAACCTCTTCTT 59.560 45.455 0.00 0.00 0.00 2.52
2234 2267 2.551459 CACAAGCCTCAACCTCTTCTTG 59.449 50.000 0.00 0.00 37.51 3.02
2235 2268 2.173569 ACAAGCCTCAACCTCTTCTTGT 59.826 45.455 0.00 0.00 39.19 3.16
2236 2269 3.391296 ACAAGCCTCAACCTCTTCTTGTA 59.609 43.478 3.91 0.00 41.31 2.41
2237 2270 3.971245 AGCCTCAACCTCTTCTTGTAG 57.029 47.619 0.00 0.00 0.00 2.74
2238 2271 2.569404 AGCCTCAACCTCTTCTTGTAGG 59.431 50.000 0.00 0.00 38.93 3.18
2240 2273 3.617775 GCCTCAACCTCTTCTTGTAGGTC 60.618 52.174 0.00 0.00 45.51 3.85
2241 2274 3.835395 CCTCAACCTCTTCTTGTAGGTCT 59.165 47.826 0.00 0.00 45.51 3.85
2242 2275 5.017490 CCTCAACCTCTTCTTGTAGGTCTA 58.983 45.833 0.00 0.00 45.51 2.59
2243 2276 5.105675 CCTCAACCTCTTCTTGTAGGTCTAC 60.106 48.000 0.00 1.43 45.51 2.59
2244 2277 4.771054 TCAACCTCTTCTTGTAGGTCTACC 59.229 45.833 5.77 0.00 45.51 3.18
2245 2278 3.710724 ACCTCTTCTTGTAGGTCTACCC 58.289 50.000 5.77 0.00 42.60 3.69
2246 2279 3.077088 ACCTCTTCTTGTAGGTCTACCCA 59.923 47.826 5.77 0.00 42.60 4.51
2247 2280 4.264895 ACCTCTTCTTGTAGGTCTACCCAT 60.265 45.833 5.77 0.00 42.60 4.00
2248 2281 4.100189 CCTCTTCTTGTAGGTCTACCCATG 59.900 50.000 5.77 0.00 35.26 3.66
2249 2282 4.684724 TCTTCTTGTAGGTCTACCCATGT 58.315 43.478 5.77 0.00 35.26 3.21
2250 2283 4.466370 TCTTCTTGTAGGTCTACCCATGTG 59.534 45.833 5.77 0.00 35.26 3.21
2251 2284 4.055710 TCTTGTAGGTCTACCCATGTGA 57.944 45.455 5.77 0.00 35.26 3.58
2252 2285 4.620723 TCTTGTAGGTCTACCCATGTGAT 58.379 43.478 5.77 0.00 35.26 3.06
2253 2286 5.030147 TCTTGTAGGTCTACCCATGTGATT 58.970 41.667 5.77 0.00 35.26 2.57
2254 2287 5.128827 TCTTGTAGGTCTACCCATGTGATTC 59.871 44.000 5.77 0.00 35.26 2.52
2255 2288 3.383505 TGTAGGTCTACCCATGTGATTCG 59.616 47.826 5.77 0.00 35.26 3.34
2256 2289 2.747177 AGGTCTACCCATGTGATTCGA 58.253 47.619 0.00 0.00 36.42 3.71
2257 2290 2.431057 AGGTCTACCCATGTGATTCGAC 59.569 50.000 0.00 0.00 36.42 4.20
2258 2291 2.431057 GGTCTACCCATGTGATTCGACT 59.569 50.000 0.00 0.00 0.00 4.18
2259 2292 3.448686 GTCTACCCATGTGATTCGACTG 58.551 50.000 0.00 0.00 0.00 3.51
2260 2293 3.130516 GTCTACCCATGTGATTCGACTGA 59.869 47.826 0.00 0.00 0.00 3.41
2261 2294 3.960755 TCTACCCATGTGATTCGACTGAT 59.039 43.478 0.00 0.00 0.00 2.90
2262 2295 2.910199 ACCCATGTGATTCGACTGATG 58.090 47.619 0.00 0.00 0.00 3.07
2263 2296 2.501316 ACCCATGTGATTCGACTGATGA 59.499 45.455 0.00 0.00 0.00 2.92
2264 2297 3.055167 ACCCATGTGATTCGACTGATGAA 60.055 43.478 0.00 0.00 0.00 2.57
2265 2298 3.558829 CCCATGTGATTCGACTGATGAAG 59.441 47.826 0.00 0.00 0.00 3.02
2266 2299 4.436332 CCATGTGATTCGACTGATGAAGA 58.564 43.478 0.00 0.00 0.00 2.87
2267 2300 4.269603 CCATGTGATTCGACTGATGAAGAC 59.730 45.833 0.00 0.00 0.00 3.01
2268 2301 3.501950 TGTGATTCGACTGATGAAGACG 58.498 45.455 0.00 0.00 44.04 4.18
2275 2308 5.349824 TCGACTGATGAAGACGATGATAG 57.650 43.478 0.00 0.00 45.82 2.08
2276 2309 5.057149 TCGACTGATGAAGACGATGATAGA 58.943 41.667 0.00 0.00 45.82 1.98
2277 2310 5.050023 TCGACTGATGAAGACGATGATAGAC 60.050 44.000 0.00 0.00 45.82 2.59
2278 2311 5.049749 CGACTGATGAAGACGATGATAGACT 60.050 44.000 0.00 0.00 45.25 3.24
2279 2312 6.512578 CGACTGATGAAGACGATGATAGACTT 60.513 42.308 0.00 0.00 45.25 3.01
2280 2313 7.106439 ACTGATGAAGACGATGATAGACTTT 57.894 36.000 0.00 0.00 0.00 2.66
2281 2314 6.977502 ACTGATGAAGACGATGATAGACTTTG 59.022 38.462 0.00 0.00 0.00 2.77
2282 2315 6.867550 TGATGAAGACGATGATAGACTTTGT 58.132 36.000 0.00 0.00 0.00 2.83
2283 2316 6.753744 TGATGAAGACGATGATAGACTTTGTG 59.246 38.462 0.00 0.00 0.00 3.33
2284 2317 5.410924 TGAAGACGATGATAGACTTTGTGG 58.589 41.667 0.00 0.00 0.00 4.17
2285 2318 5.185056 TGAAGACGATGATAGACTTTGTGGA 59.815 40.000 0.00 0.00 0.00 4.02
2286 2319 5.860941 AGACGATGATAGACTTTGTGGAT 57.139 39.130 0.00 0.00 0.00 3.41
2287 2320 5.837437 AGACGATGATAGACTTTGTGGATC 58.163 41.667 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.782222 GCGGCTCGACCATCCACTA 61.782 63.158 0.00 0.00 39.03 2.74
16 17 3.917760 GGCTAGCGGCTCGACCAT 61.918 66.667 5.39 0.00 41.46 3.55
30 31 4.440880 CGATGAAGAAGAAGATGAAGGCT 58.559 43.478 0.00 0.00 0.00 4.58
63 70 4.530857 CGACAGGATGACCCGCCC 62.531 72.222 0.00 0.00 39.69 6.13
72 79 3.518998 CGCCGAGGACGACAGGAT 61.519 66.667 0.00 0.00 42.66 3.24
104 121 0.911769 CAGTCCATCCTACCTGGCAA 59.088 55.000 0.00 0.00 33.56 4.52
148 165 0.827368 GGAGGAAGAAGAGGCGATGT 59.173 55.000 0.00 0.00 0.00 3.06
202 219 0.757935 GTACTGGGGGACGGCTATCA 60.758 60.000 0.00 0.00 0.00 2.15
267 284 3.244561 CCTAAACAGAGGAAGAAGTGGCA 60.245 47.826 0.00 0.00 39.15 4.92
293 310 1.763968 TGAATCAGGTCGTCTCCGAT 58.236 50.000 0.00 0.00 46.30 4.18
396 415 0.566136 CGAATCGAATGTCGTGGTCG 59.434 55.000 0.00 2.55 41.35 4.79
404 425 5.407502 TGACATGTAGAACGAATCGAATGT 58.592 37.500 10.55 8.77 34.80 2.71
570 591 0.121197 AACCTTCCTCCTCCCCATCA 59.879 55.000 0.00 0.00 0.00 3.07
592 613 2.024846 CACCCCCTCTCTTCTCTCACTA 60.025 54.545 0.00 0.00 0.00 2.74
615 636 3.721575 TCACCCTGCCCATCACTATTTAT 59.278 43.478 0.00 0.00 0.00 1.40
625 646 4.289672 CCTATATTTACTCACCCTGCCCAT 59.710 45.833 0.00 0.00 0.00 4.00
665 688 2.344950 CAGCATGACTGTCACTCTTCC 58.655 52.381 13.50 0.00 41.86 3.46
714 737 0.524862 CAGGCATTGCACAGAGTTCC 59.475 55.000 11.39 0.00 0.00 3.62
879 905 2.038813 TCCTCCATGCCCTCGTCA 59.961 61.111 0.00 0.00 0.00 4.35
921 949 3.643320 CCTCCTGATGATAGTGGCTGTAA 59.357 47.826 0.00 0.00 0.00 2.41
925 953 2.783379 TCCTCCTGATGATAGTGGCT 57.217 50.000 0.00 0.00 0.00 4.75
984 1012 0.682209 GCATGGGGATGCACTCAAGT 60.682 55.000 2.14 0.00 46.25 3.16
1030 1058 4.353437 GAACTCCGTCGGCACCGT 62.353 66.667 6.34 0.00 40.74 4.83
1116 1144 2.616458 GGTGGCCCAACCCTGATCT 61.616 63.158 0.00 0.00 37.83 2.75
1138 1166 0.396435 TTGACCTGATGAACGGCTGT 59.604 50.000 0.00 0.00 0.00 4.40
1153 1181 2.159099 TCACCATGTAGCCGATCTTGAC 60.159 50.000 0.00 0.00 0.00 3.18
1240 1270 0.537143 TGCTTCCCGCACTTGTTGAT 60.537 50.000 0.00 0.00 45.47 2.57
1290 1320 2.602267 TCGAAAGAGGTGGCCCGA 60.602 61.111 0.00 0.00 35.12 5.14
1449 1479 2.038557 TCTTTGGCTAGTTGGTGAGGTC 59.961 50.000 0.00 0.00 0.00 3.85
1537 1567 1.381056 TGCCTGGTGTTTGGTTGCT 60.381 52.632 0.00 0.00 0.00 3.91
1566 1598 0.475906 GCCCTCTTATCTGCATGGGT 59.524 55.000 0.00 0.00 37.09 4.51
1591 1624 2.616634 ATGCATGTTGTTTGGTTGCA 57.383 40.000 0.00 0.00 46.22 4.08
1706 1739 4.386867 AATGCGAGCTAAGCTAACTGTA 57.613 40.909 13.80 0.00 39.88 2.74
1707 1740 2.969628 ATGCGAGCTAAGCTAACTGT 57.030 45.000 13.80 0.00 39.88 3.55
1708 1741 5.718649 TTTAATGCGAGCTAAGCTAACTG 57.281 39.130 13.80 0.00 39.88 3.16
1709 1742 6.927294 ATTTTAATGCGAGCTAAGCTAACT 57.073 33.333 13.80 0.00 39.88 2.24
1710 1743 7.410485 AGAATTTTAATGCGAGCTAAGCTAAC 58.590 34.615 13.80 0.00 39.88 2.34
1711 1744 7.553881 AGAATTTTAATGCGAGCTAAGCTAA 57.446 32.000 13.80 3.91 39.88 3.09
1712 1745 7.095607 GCTAGAATTTTAATGCGAGCTAAGCTA 60.096 37.037 13.80 2.65 39.00 3.32
1713 1746 6.293135 GCTAGAATTTTAATGCGAGCTAAGCT 60.293 38.462 13.80 0.00 39.00 3.74
1714 1747 5.848559 GCTAGAATTTTAATGCGAGCTAAGC 59.151 40.000 7.95 6.70 39.00 3.09
1715 1748 6.067669 CGCTAGAATTTTAATGCGAGCTAAG 58.932 40.000 12.02 0.00 45.15 2.18
1716 1749 5.751509 TCGCTAGAATTTTAATGCGAGCTAA 59.248 36.000 12.02 0.73 45.74 3.09
1717 1750 5.286438 TCGCTAGAATTTTAATGCGAGCTA 58.714 37.500 12.02 1.17 45.74 3.32
1718 1751 4.119862 TCGCTAGAATTTTAATGCGAGCT 58.880 39.130 12.02 0.00 45.74 4.09
1719 1752 4.452890 TCGCTAGAATTTTAATGCGAGC 57.547 40.909 7.86 5.70 45.74 5.03
1722 1755 3.248602 AGGCTCGCTAGAATTTTAATGCG 59.751 43.478 0.00 0.00 43.95 4.73
1723 1756 4.820284 AGGCTCGCTAGAATTTTAATGC 57.180 40.909 0.00 0.00 0.00 3.56
1724 1757 6.146347 GGTCTAGGCTCGCTAGAATTTTAATG 59.854 42.308 0.00 0.00 35.49 1.90
1725 1758 6.224584 GGTCTAGGCTCGCTAGAATTTTAAT 58.775 40.000 0.00 0.00 35.49 1.40
1726 1759 5.598769 GGTCTAGGCTCGCTAGAATTTTAA 58.401 41.667 0.00 0.00 35.49 1.52
1727 1760 4.261489 CGGTCTAGGCTCGCTAGAATTTTA 60.261 45.833 0.00 0.00 35.49 1.52
1728 1761 3.491104 CGGTCTAGGCTCGCTAGAATTTT 60.491 47.826 0.00 0.00 35.49 1.82
1729 1762 2.034812 CGGTCTAGGCTCGCTAGAATTT 59.965 50.000 0.00 0.00 35.49 1.82
1730 1763 1.609555 CGGTCTAGGCTCGCTAGAATT 59.390 52.381 0.00 0.00 35.49 2.17
1731 1764 1.202782 TCGGTCTAGGCTCGCTAGAAT 60.203 52.381 0.00 0.00 35.49 2.40
1732 1765 0.179702 TCGGTCTAGGCTCGCTAGAA 59.820 55.000 0.00 0.00 35.49 2.10
1733 1766 0.249953 CTCGGTCTAGGCTCGCTAGA 60.250 60.000 0.00 0.00 0.00 2.43
1734 1767 0.533308 ACTCGGTCTAGGCTCGCTAG 60.533 60.000 0.00 0.00 0.00 3.42
1735 1768 0.532417 GACTCGGTCTAGGCTCGCTA 60.532 60.000 0.00 0.00 0.00 4.26
1736 1769 1.820481 GACTCGGTCTAGGCTCGCT 60.820 63.158 0.00 0.00 0.00 4.93
1737 1770 0.532417 TAGACTCGGTCTAGGCTCGC 60.532 60.000 9.00 0.00 41.51 5.03
1738 1771 1.868498 CTTAGACTCGGTCTAGGCTCG 59.132 57.143 11.81 0.00 44.46 5.03
1739 1772 2.921821 ACTTAGACTCGGTCTAGGCTC 58.078 52.381 17.26 0.00 44.46 4.70
1740 1773 3.369242 AACTTAGACTCGGTCTAGGCT 57.631 47.619 17.26 3.34 44.46 4.58
1741 1774 4.036616 CCTTAACTTAGACTCGGTCTAGGC 59.963 50.000 17.26 0.00 44.46 3.93
1742 1775 4.579753 CCCTTAACTTAGACTCGGTCTAGG 59.420 50.000 16.32 16.32 44.46 3.02
1743 1776 5.192176 ACCCTTAACTTAGACTCGGTCTAG 58.808 45.833 11.81 9.65 44.46 2.43
1744 1777 5.184892 ACCCTTAACTTAGACTCGGTCTA 57.815 43.478 9.00 9.00 41.51 2.59
1745 1778 4.015764 GACCCTTAACTTAGACTCGGTCT 58.984 47.826 10.71 10.71 45.54 3.85
1746 1779 3.181502 CGACCCTTAACTTAGACTCGGTC 60.182 52.174 0.00 0.00 36.10 4.79
1747 1780 2.751806 CGACCCTTAACTTAGACTCGGT 59.248 50.000 0.00 0.00 0.00 4.69
1748 1781 3.012518 TCGACCCTTAACTTAGACTCGG 58.987 50.000 0.00 0.00 0.00 4.63
1749 1782 3.065095 CCTCGACCCTTAACTTAGACTCG 59.935 52.174 0.00 0.00 0.00 4.18
1750 1783 4.015764 ACCTCGACCCTTAACTTAGACTC 58.984 47.826 0.00 0.00 0.00 3.36
1751 1784 3.762823 CACCTCGACCCTTAACTTAGACT 59.237 47.826 0.00 0.00 0.00 3.24
1752 1785 3.509184 ACACCTCGACCCTTAACTTAGAC 59.491 47.826 0.00 0.00 0.00 2.59
1753 1786 3.508793 CACACCTCGACCCTTAACTTAGA 59.491 47.826 0.00 0.00 0.00 2.10
1754 1787 3.368116 CCACACCTCGACCCTTAACTTAG 60.368 52.174 0.00 0.00 0.00 2.18
1755 1788 2.564062 CCACACCTCGACCCTTAACTTA 59.436 50.000 0.00 0.00 0.00 2.24
1756 1789 1.346722 CCACACCTCGACCCTTAACTT 59.653 52.381 0.00 0.00 0.00 2.66
1757 1790 0.974383 CCACACCTCGACCCTTAACT 59.026 55.000 0.00 0.00 0.00 2.24
1758 1791 0.971386 TCCACACCTCGACCCTTAAC 59.029 55.000 0.00 0.00 0.00 2.01
1759 1792 1.719529 TTCCACACCTCGACCCTTAA 58.280 50.000 0.00 0.00 0.00 1.85
1760 1793 1.719529 TTTCCACACCTCGACCCTTA 58.280 50.000 0.00 0.00 0.00 2.69
1761 1794 0.841289 TTTTCCACACCTCGACCCTT 59.159 50.000 0.00 0.00 0.00 3.95
1762 1795 1.064825 ATTTTCCACACCTCGACCCT 58.935 50.000 0.00 0.00 0.00 4.34
1763 1796 1.165270 CATTTTCCACACCTCGACCC 58.835 55.000 0.00 0.00 0.00 4.46
1764 1797 1.165270 CCATTTTCCACACCTCGACC 58.835 55.000 0.00 0.00 0.00 4.79
1765 1798 0.521735 GCCATTTTCCACACCTCGAC 59.478 55.000 0.00 0.00 0.00 4.20
1766 1799 0.400213 AGCCATTTTCCACACCTCGA 59.600 50.000 0.00 0.00 0.00 4.04
1767 1800 1.200020 GAAGCCATTTTCCACACCTCG 59.800 52.381 0.00 0.00 0.00 4.63
1768 1801 2.229784 CAGAAGCCATTTTCCACACCTC 59.770 50.000 0.00 0.00 0.00 3.85
1769 1802 2.158475 TCAGAAGCCATTTTCCACACCT 60.158 45.455 0.00 0.00 0.00 4.00
1770 1803 2.029918 GTCAGAAGCCATTTTCCACACC 60.030 50.000 0.00 0.00 0.00 4.16
1771 1804 2.029918 GGTCAGAAGCCATTTTCCACAC 60.030 50.000 0.00 0.00 0.00 3.82
1772 1805 2.238521 GGTCAGAAGCCATTTTCCACA 58.761 47.619 0.00 0.00 0.00 4.17
1773 1806 2.238521 TGGTCAGAAGCCATTTTCCAC 58.761 47.619 0.00 0.00 0.00 4.02
1774 1807 2.627699 GTTGGTCAGAAGCCATTTTCCA 59.372 45.455 0.00 0.00 35.71 3.53
1775 1808 2.893489 AGTTGGTCAGAAGCCATTTTCC 59.107 45.455 0.00 0.00 35.71 3.13
1776 1809 4.590850 AAGTTGGTCAGAAGCCATTTTC 57.409 40.909 0.00 0.00 35.71 2.29
1777 1810 7.232534 TGTTATAAGTTGGTCAGAAGCCATTTT 59.767 33.333 0.00 0.00 35.71 1.82
1778 1811 6.719370 TGTTATAAGTTGGTCAGAAGCCATTT 59.281 34.615 0.00 0.00 35.71 2.32
1779 1812 6.245408 TGTTATAAGTTGGTCAGAAGCCATT 58.755 36.000 0.00 0.00 35.71 3.16
1780 1813 5.815581 TGTTATAAGTTGGTCAGAAGCCAT 58.184 37.500 0.00 0.00 35.71 4.40
1781 1814 5.235850 TGTTATAAGTTGGTCAGAAGCCA 57.764 39.130 0.00 0.00 0.00 4.75
1782 1815 6.599638 AGATTGTTATAAGTTGGTCAGAAGCC 59.400 38.462 0.00 0.00 0.00 4.35
1783 1816 7.550906 AGAGATTGTTATAAGTTGGTCAGAAGC 59.449 37.037 0.00 0.00 0.00 3.86
1786 1819 8.198109 GCTAGAGATTGTTATAAGTTGGTCAGA 58.802 37.037 0.00 0.00 0.00 3.27
1787 1820 8.200792 AGCTAGAGATTGTTATAAGTTGGTCAG 58.799 37.037 0.00 0.00 0.00 3.51
1788 1821 8.079211 AGCTAGAGATTGTTATAAGTTGGTCA 57.921 34.615 0.00 0.00 0.00 4.02
1789 1822 9.685828 CTAGCTAGAGATTGTTATAAGTTGGTC 57.314 37.037 16.15 0.00 0.00 4.02
1790 1823 9.203163 ACTAGCTAGAGATTGTTATAAGTTGGT 57.797 33.333 27.45 0.00 0.00 3.67
1794 1827 9.953697 CGAAACTAGCTAGAGATTGTTATAAGT 57.046 33.333 27.45 0.00 30.10 2.24
1797 1830 8.291032 GCTCGAAACTAGCTAGAGATTGTTATA 58.709 37.037 27.45 1.55 37.01 0.98
1798 1831 7.142680 GCTCGAAACTAGCTAGAGATTGTTAT 58.857 38.462 27.45 0.00 37.01 1.89
1799 1832 6.095021 TGCTCGAAACTAGCTAGAGATTGTTA 59.905 38.462 27.45 5.20 40.73 2.41
1800 1833 5.105716 TGCTCGAAACTAGCTAGAGATTGTT 60.106 40.000 27.45 7.84 40.73 2.83
1801 1834 4.399618 TGCTCGAAACTAGCTAGAGATTGT 59.600 41.667 27.45 1.08 40.73 2.71
1802 1835 4.926244 TGCTCGAAACTAGCTAGAGATTG 58.074 43.478 27.45 14.95 40.73 2.67
1803 1836 5.584253 TTGCTCGAAACTAGCTAGAGATT 57.416 39.130 27.45 17.31 40.73 2.40
1804 1837 5.584253 TTTGCTCGAAACTAGCTAGAGAT 57.416 39.130 27.45 12.07 40.73 2.75
1805 1838 5.183331 TCTTTTGCTCGAAACTAGCTAGAGA 59.817 40.000 27.45 17.30 40.73 3.10
1806 1839 5.403246 TCTTTTGCTCGAAACTAGCTAGAG 58.597 41.667 27.45 14.39 40.73 2.43
1807 1840 5.386958 TCTTTTGCTCGAAACTAGCTAGA 57.613 39.130 27.45 3.53 40.73 2.43
1808 1841 5.807520 TCATCTTTTGCTCGAAACTAGCTAG 59.192 40.000 19.44 19.44 40.73 3.42
1809 1842 5.720202 TCATCTTTTGCTCGAAACTAGCTA 58.280 37.500 0.00 0.00 40.73 3.32
1810 1843 4.569943 TCATCTTTTGCTCGAAACTAGCT 58.430 39.130 0.00 0.00 40.73 3.32
1811 1844 4.928661 TCATCTTTTGCTCGAAACTAGC 57.071 40.909 0.00 0.00 40.50 3.42
1812 1845 6.091305 TGTCATCATCTTTTGCTCGAAACTAG 59.909 38.462 0.00 0.00 0.00 2.57
1813 1846 5.931724 TGTCATCATCTTTTGCTCGAAACTA 59.068 36.000 0.00 0.00 0.00 2.24
1814 1847 4.756642 TGTCATCATCTTTTGCTCGAAACT 59.243 37.500 0.00 0.00 0.00 2.66
1815 1848 5.034554 TGTCATCATCTTTTGCTCGAAAC 57.965 39.130 0.00 0.00 0.00 2.78
1816 1849 5.451908 GTTGTCATCATCTTTTGCTCGAAA 58.548 37.500 0.00 0.00 0.00 3.46
1817 1850 4.083324 GGTTGTCATCATCTTTTGCTCGAA 60.083 41.667 0.00 0.00 0.00 3.71
1818 1851 3.436704 GGTTGTCATCATCTTTTGCTCGA 59.563 43.478 0.00 0.00 0.00 4.04
1819 1852 3.438087 AGGTTGTCATCATCTTTTGCTCG 59.562 43.478 0.00 0.00 0.00 5.03
1820 1853 5.159209 CAAGGTTGTCATCATCTTTTGCTC 58.841 41.667 0.00 0.00 0.00 4.26
1821 1854 4.586001 ACAAGGTTGTCATCATCTTTTGCT 59.414 37.500 0.00 0.00 36.50 3.91
1822 1855 4.874970 ACAAGGTTGTCATCATCTTTTGC 58.125 39.130 0.00 0.00 36.50 3.68
1823 1856 9.132521 GATAAACAAGGTTGTCATCATCTTTTG 57.867 33.333 10.41 0.00 41.31 2.44
1824 1857 9.082313 AGATAAACAAGGTTGTCATCATCTTTT 57.918 29.630 14.87 0.43 41.31 2.27
1825 1858 8.517878 CAGATAAACAAGGTTGTCATCATCTTT 58.482 33.333 14.87 0.97 41.31 2.52
1826 1859 7.667219 ACAGATAAACAAGGTTGTCATCATCTT 59.333 33.333 14.87 1.51 41.31 2.40
1827 1860 7.120285 CACAGATAAACAAGGTTGTCATCATCT 59.880 37.037 14.87 9.58 41.31 2.90
1828 1861 7.246311 CACAGATAAACAAGGTTGTCATCATC 58.754 38.462 14.87 8.11 41.31 2.92
1829 1862 6.151648 CCACAGATAAACAAGGTTGTCATCAT 59.848 38.462 14.87 5.16 41.31 2.45
1830 1863 5.473162 CCACAGATAAACAAGGTTGTCATCA 59.527 40.000 14.87 0.00 41.31 3.07
1831 1864 5.619981 GCCACAGATAAACAAGGTTGTCATC 60.620 44.000 0.00 3.14 41.31 2.92
1832 1865 4.218417 GCCACAGATAAACAAGGTTGTCAT 59.782 41.667 0.00 0.00 41.31 3.06
1833 1866 3.568007 GCCACAGATAAACAAGGTTGTCA 59.432 43.478 0.00 0.00 41.31 3.58
1834 1867 3.364964 CGCCACAGATAAACAAGGTTGTC 60.365 47.826 0.00 0.00 41.31 3.18
1835 1868 2.552315 CGCCACAGATAAACAAGGTTGT 59.448 45.455 0.00 0.00 44.72 3.32
1836 1869 2.811431 TCGCCACAGATAAACAAGGTTG 59.189 45.455 0.00 0.00 0.00 3.77
1837 1870 3.074412 CTCGCCACAGATAAACAAGGTT 58.926 45.455 0.00 0.00 0.00 3.50
1838 1871 2.038557 ACTCGCCACAGATAAACAAGGT 59.961 45.455 0.00 0.00 0.00 3.50
1839 1872 2.673368 GACTCGCCACAGATAAACAAGG 59.327 50.000 0.00 0.00 0.00 3.61
1840 1873 2.673368 GGACTCGCCACAGATAAACAAG 59.327 50.000 0.00 0.00 36.34 3.16
1841 1874 2.301870 AGGACTCGCCACAGATAAACAA 59.698 45.455 0.00 0.00 40.02 2.83
1842 1875 1.899814 AGGACTCGCCACAGATAAACA 59.100 47.619 0.00 0.00 40.02 2.83
1843 1876 2.674796 AGGACTCGCCACAGATAAAC 57.325 50.000 0.00 0.00 40.02 2.01
1844 1877 2.416836 CGAAGGACTCGCCACAGATAAA 60.417 50.000 0.00 0.00 41.49 1.40
1845 1878 1.134367 CGAAGGACTCGCCACAGATAA 59.866 52.381 0.00 0.00 41.49 1.75
1846 1879 0.738975 CGAAGGACTCGCCACAGATA 59.261 55.000 0.00 0.00 41.49 1.98
1847 1880 1.513158 CGAAGGACTCGCCACAGAT 59.487 57.895 0.00 0.00 41.49 2.90
1848 1881 2.962569 CGAAGGACTCGCCACAGA 59.037 61.111 0.00 0.00 41.49 3.41
1858 1891 9.745880 TTCTTGTATCATATTTAGTCGAAGGAC 57.254 33.333 0.00 0.00 43.76 3.85
1859 1892 9.745880 GTTCTTGTATCATATTTAGTCGAAGGA 57.254 33.333 0.00 0.00 0.00 3.36
1860 1893 9.529325 TGTTCTTGTATCATATTTAGTCGAAGG 57.471 33.333 0.00 0.00 0.00 3.46
1874 1907 9.283768 AGTGTTTCAATGTATGTTCTTGTATCA 57.716 29.630 0.00 0.00 0.00 2.15
1952 1985 9.435570 TTGAGGGATAATAAGCTAAACTACTCT 57.564 33.333 0.00 0.00 0.00 3.24
1953 1986 9.478768 GTTGAGGGATAATAAGCTAAACTACTC 57.521 37.037 0.00 0.00 0.00 2.59
1954 1987 9.214962 AGTTGAGGGATAATAAGCTAAACTACT 57.785 33.333 0.00 0.00 0.00 2.57
1955 1988 9.478768 GAGTTGAGGGATAATAAGCTAAACTAC 57.521 37.037 0.00 0.00 0.00 2.73
1956 1989 9.209048 TGAGTTGAGGGATAATAAGCTAAACTA 57.791 33.333 0.00 0.00 0.00 2.24
1957 1990 8.090788 TGAGTTGAGGGATAATAAGCTAAACT 57.909 34.615 0.00 0.00 0.00 2.66
1958 1991 8.910351 ATGAGTTGAGGGATAATAAGCTAAAC 57.090 34.615 0.00 0.00 0.00 2.01
1990 2023 9.747898 TCCTTGTATTGTGTTCCAATTAAGTAT 57.252 29.630 0.00 0.00 41.01 2.12
1991 2024 9.747898 ATCCTTGTATTGTGTTCCAATTAAGTA 57.252 29.630 0.00 0.00 41.01 2.24
1992 2025 8.650143 ATCCTTGTATTGTGTTCCAATTAAGT 57.350 30.769 0.00 0.00 41.01 2.24
1993 2026 9.573133 GAATCCTTGTATTGTGTTCCAATTAAG 57.427 33.333 0.00 0.00 41.01 1.85
1994 2027 9.083422 TGAATCCTTGTATTGTGTTCCAATTAA 57.917 29.630 0.00 0.00 41.01 1.40
1995 2028 8.519526 GTGAATCCTTGTATTGTGTTCCAATTA 58.480 33.333 0.00 0.00 41.01 1.40
1996 2029 7.233348 AGTGAATCCTTGTATTGTGTTCCAATT 59.767 33.333 0.00 0.00 41.01 2.32
1997 2030 6.721208 AGTGAATCCTTGTATTGTGTTCCAAT 59.279 34.615 0.00 0.00 45.68 3.16
1998 2031 6.068010 AGTGAATCCTTGTATTGTGTTCCAA 58.932 36.000 0.00 0.00 37.49 3.53
1999 2032 5.630121 AGTGAATCCTTGTATTGTGTTCCA 58.370 37.500 0.00 0.00 0.00 3.53
2000 2033 6.653320 TGTAGTGAATCCTTGTATTGTGTTCC 59.347 38.462 0.00 0.00 0.00 3.62
2001 2034 7.667043 TGTAGTGAATCCTTGTATTGTGTTC 57.333 36.000 0.00 0.00 0.00 3.18
2002 2035 8.349983 GTTTGTAGTGAATCCTTGTATTGTGTT 58.650 33.333 0.00 0.00 0.00 3.32
2003 2036 7.500892 TGTTTGTAGTGAATCCTTGTATTGTGT 59.499 33.333 0.00 0.00 0.00 3.72
2004 2037 7.870826 TGTTTGTAGTGAATCCTTGTATTGTG 58.129 34.615 0.00 0.00 0.00 3.33
2005 2038 8.635765 ATGTTTGTAGTGAATCCTTGTATTGT 57.364 30.769 0.00 0.00 0.00 2.71
2006 2039 9.912634 AAATGTTTGTAGTGAATCCTTGTATTG 57.087 29.630 0.00 0.00 0.00 1.90
2012 2045 9.927668 CCAATTAAATGTTTGTAGTGAATCCTT 57.072 29.630 0.00 0.00 0.00 3.36
2013 2046 8.531146 CCCAATTAAATGTTTGTAGTGAATCCT 58.469 33.333 0.00 0.00 0.00 3.24
2014 2047 8.527810 TCCCAATTAAATGTTTGTAGTGAATCC 58.472 33.333 0.00 0.00 0.00 3.01
2035 2068 9.983024 TCTTTGGACTATATTTTGTTATCCCAA 57.017 29.630 0.00 0.00 0.00 4.12
2036 2069 9.403583 GTCTTTGGACTATATTTTGTTATCCCA 57.596 33.333 0.00 0.00 39.24 4.37
2037 2070 8.847196 GGTCTTTGGACTATATTTTGTTATCCC 58.153 37.037 0.00 0.00 41.82 3.85
2038 2071 9.403583 TGGTCTTTGGACTATATTTTGTTATCC 57.596 33.333 0.00 0.00 41.82 2.59
2060 2093 4.634443 ACTACGCCAGAACATTTTATGGTC 59.366 41.667 7.09 0.00 44.75 4.02
2061 2094 4.394920 CACTACGCCAGAACATTTTATGGT 59.605 41.667 7.09 0.00 44.75 3.55
2062 2095 4.730613 GCACTACGCCAGAACATTTTATGG 60.731 45.833 0.71 0.71 45.59 2.74
2063 2096 4.142708 TGCACTACGCCAGAACATTTTATG 60.143 41.667 0.00 0.00 41.33 1.90
2064 2097 4.006989 TGCACTACGCCAGAACATTTTAT 58.993 39.130 0.00 0.00 41.33 1.40
2065 2098 3.187637 GTGCACTACGCCAGAACATTTTA 59.812 43.478 10.32 0.00 41.33 1.52
2066 2099 2.031157 GTGCACTACGCCAGAACATTTT 60.031 45.455 10.32 0.00 41.33 1.82
2067 2100 1.535462 GTGCACTACGCCAGAACATTT 59.465 47.619 10.32 0.00 41.33 2.32
2068 2101 1.156736 GTGCACTACGCCAGAACATT 58.843 50.000 10.32 0.00 41.33 2.71
2069 2102 0.321671 AGTGCACTACGCCAGAACAT 59.678 50.000 20.16 0.00 41.33 2.71
2070 2103 0.599991 CAGTGCACTACGCCAGAACA 60.600 55.000 21.20 0.00 41.33 3.18
2071 2104 0.600255 ACAGTGCACTACGCCAGAAC 60.600 55.000 21.20 0.00 41.33 3.01
2072 2105 0.963225 TACAGTGCACTACGCCAGAA 59.037 50.000 21.20 0.00 41.33 3.02
2073 2106 0.963225 TTACAGTGCACTACGCCAGA 59.037 50.000 21.20 0.00 41.33 3.86
2074 2107 1.660607 CATTACAGTGCACTACGCCAG 59.339 52.381 21.20 8.66 41.33 4.85
2075 2108 1.674519 CCATTACAGTGCACTACGCCA 60.675 52.381 21.20 2.30 41.33 5.69
2076 2109 1.006832 CCATTACAGTGCACTACGCC 58.993 55.000 21.20 0.00 41.33 5.68
2077 2110 2.004583 TCCATTACAGTGCACTACGC 57.995 50.000 21.20 0.00 42.89 4.42
2078 2111 2.285220 GCATCCATTACAGTGCACTACG 59.715 50.000 21.20 11.10 37.52 3.51
2079 2112 2.614057 GGCATCCATTACAGTGCACTAC 59.386 50.000 21.20 0.00 39.27 2.73
2080 2113 2.238395 TGGCATCCATTACAGTGCACTA 59.762 45.455 21.20 4.30 39.27 2.74
2081 2114 1.004628 TGGCATCCATTACAGTGCACT 59.995 47.619 15.25 15.25 39.27 4.40
2082 2115 1.462616 TGGCATCCATTACAGTGCAC 58.537 50.000 9.40 9.40 39.27 4.57
2083 2116 2.093890 CTTGGCATCCATTACAGTGCA 58.906 47.619 0.00 0.00 39.27 4.57
2084 2117 1.202336 GCTTGGCATCCATTACAGTGC 60.202 52.381 0.00 0.00 36.88 4.40
2085 2118 1.064505 CGCTTGGCATCCATTACAGTG 59.935 52.381 0.00 0.00 31.53 3.66
2086 2119 1.065491 TCGCTTGGCATCCATTACAGT 60.065 47.619 0.00 0.00 31.53 3.55
2087 2120 1.667236 TCGCTTGGCATCCATTACAG 58.333 50.000 0.00 0.00 31.53 2.74
2088 2121 2.121291 TTCGCTTGGCATCCATTACA 57.879 45.000 0.00 0.00 31.53 2.41
2089 2122 3.502191 TTTTCGCTTGGCATCCATTAC 57.498 42.857 0.00 0.00 31.53 1.89
2090 2123 3.243035 CGATTTTCGCTTGGCATCCATTA 60.243 43.478 0.00 0.00 29.50 1.90
2091 2124 2.480073 CGATTTTCGCTTGGCATCCATT 60.480 45.455 0.00 0.00 29.50 3.16
2092 2125 1.066002 CGATTTTCGCTTGGCATCCAT 59.934 47.619 0.00 0.00 29.50 3.41
2093 2126 0.451383 CGATTTTCGCTTGGCATCCA 59.549 50.000 0.00 0.00 31.14 3.41
2094 2127 0.732571 TCGATTTTCGCTTGGCATCC 59.267 50.000 0.00 0.00 40.21 3.51
2095 2128 1.857602 GCTCGATTTTCGCTTGGCATC 60.858 52.381 0.00 0.00 40.21 3.91
2096 2129 0.099436 GCTCGATTTTCGCTTGGCAT 59.901 50.000 0.00 0.00 40.21 4.40
2097 2130 1.501741 GCTCGATTTTCGCTTGGCA 59.498 52.632 0.00 0.00 40.21 4.92
2098 2131 1.581147 CGCTCGATTTTCGCTTGGC 60.581 57.895 0.00 0.00 40.21 4.52
2099 2132 0.025513 CTCGCTCGATTTTCGCTTGG 59.974 55.000 0.00 0.00 40.21 3.61
2100 2133 0.585029 GCTCGCTCGATTTTCGCTTG 60.585 55.000 0.00 0.00 40.21 4.01
2101 2134 0.737715 AGCTCGCTCGATTTTCGCTT 60.738 50.000 0.00 0.00 40.21 4.68
2102 2135 1.142778 GAGCTCGCTCGATTTTCGCT 61.143 55.000 0.00 3.23 40.21 4.93
2103 2136 1.271258 GAGCTCGCTCGATTTTCGC 59.729 57.895 0.00 0.00 40.21 4.70
2112 2145 1.602851 TGAGGTAATACGAGCTCGCTC 59.397 52.381 34.83 28.32 45.12 5.03
2113 2146 1.676746 TGAGGTAATACGAGCTCGCT 58.323 50.000 34.83 22.30 45.12 4.93
2114 2147 2.320367 CATGAGGTAATACGAGCTCGC 58.680 52.381 34.83 18.34 45.12 5.03
2115 2148 2.030717 AGCATGAGGTAATACGAGCTCG 60.031 50.000 33.45 33.45 45.12 5.03
2116 2149 3.570559 GAGCATGAGGTAATACGAGCTC 58.429 50.000 2.73 2.73 42.99 4.09
2117 2150 2.030717 CGAGCATGAGGTAATACGAGCT 60.031 50.000 0.00 0.00 0.00 4.09
2118 2151 2.320367 CGAGCATGAGGTAATACGAGC 58.680 52.381 0.00 0.00 0.00 5.03
2119 2152 2.922758 GCCGAGCATGAGGTAATACGAG 60.923 54.545 0.00 0.00 0.00 4.18
2120 2153 1.000607 GCCGAGCATGAGGTAATACGA 60.001 52.381 0.00 0.00 0.00 3.43
2121 2154 1.000163 AGCCGAGCATGAGGTAATACG 60.000 52.381 0.00 0.00 0.00 3.06
2122 2155 2.678324 GAGCCGAGCATGAGGTAATAC 58.322 52.381 0.00 0.00 0.00 1.89
2123 2156 1.269723 CGAGCCGAGCATGAGGTAATA 59.730 52.381 0.00 0.00 0.00 0.98
2124 2157 0.032678 CGAGCCGAGCATGAGGTAAT 59.967 55.000 0.00 0.00 0.00 1.89
2125 2158 1.437573 CGAGCCGAGCATGAGGTAA 59.562 57.895 0.00 0.00 0.00 2.85
2126 2159 3.120105 CGAGCCGAGCATGAGGTA 58.880 61.111 0.00 0.00 0.00 3.08
2127 2160 4.521062 GCGAGCCGAGCATGAGGT 62.521 66.667 0.00 0.00 34.19 3.85
2128 2161 3.729965 AAGCGAGCCGAGCATGAGG 62.730 63.158 0.00 0.00 37.01 3.86
2129 2162 2.202851 AAGCGAGCCGAGCATGAG 60.203 61.111 0.00 0.00 37.01 2.90
2130 2163 2.202797 GAAGCGAGCCGAGCATGA 60.203 61.111 0.00 0.00 37.01 3.07
2131 2164 3.267860 GGAAGCGAGCCGAGCATG 61.268 66.667 0.00 0.00 37.01 4.06
2132 2165 4.537433 GGGAAGCGAGCCGAGCAT 62.537 66.667 0.00 0.00 37.01 3.79
2139 2172 4.856607 CTCGACCGGGAAGCGAGC 62.857 72.222 19.87 0.00 43.88 5.03
2141 2174 3.437795 GACTCGACCGGGAAGCGA 61.438 66.667 6.32 8.61 0.00 4.93
2142 2175 3.744719 TGACTCGACCGGGAAGCG 61.745 66.667 6.32 3.96 0.00 4.68
2143 2176 2.126031 GTGACTCGACCGGGAAGC 60.126 66.667 6.32 0.00 0.00 3.86
2144 2177 1.080705 GTGTGACTCGACCGGGAAG 60.081 63.158 6.32 1.93 0.00 3.46
2145 2178 1.183030 ATGTGTGACTCGACCGGGAA 61.183 55.000 6.32 0.00 0.00 3.97
2146 2179 0.322726 TATGTGTGACTCGACCGGGA 60.323 55.000 6.32 0.00 0.00 5.14
2147 2180 0.528924 TTATGTGTGACTCGACCGGG 59.471 55.000 6.32 0.00 0.00 5.73
2148 2181 1.990563 GTTTATGTGTGACTCGACCGG 59.009 52.381 0.00 0.00 0.00 5.28
2149 2182 2.668250 TGTTTATGTGTGACTCGACCG 58.332 47.619 0.00 0.00 0.00 4.79
2150 2183 4.688879 TGAATGTTTATGTGTGACTCGACC 59.311 41.667 0.00 0.00 0.00 4.79
2151 2184 5.633601 TCTGAATGTTTATGTGTGACTCGAC 59.366 40.000 0.00 0.00 0.00 4.20
2152 2185 5.633601 GTCTGAATGTTTATGTGTGACTCGA 59.366 40.000 0.00 0.00 0.00 4.04
2153 2186 5.635280 AGTCTGAATGTTTATGTGTGACTCG 59.365 40.000 0.00 0.00 0.00 4.18
2154 2187 7.171508 TCAAGTCTGAATGTTTATGTGTGACTC 59.828 37.037 0.00 0.00 32.06 3.36
2155 2188 6.992123 TCAAGTCTGAATGTTTATGTGTGACT 59.008 34.615 0.00 0.00 34.29 3.41
2156 2189 7.041780 AGTCAAGTCTGAATGTTTATGTGTGAC 60.042 37.037 0.00 0.00 31.88 3.67
2157 2190 6.992123 AGTCAAGTCTGAATGTTTATGTGTGA 59.008 34.615 0.00 0.00 31.88 3.58
2158 2191 7.041848 TGAGTCAAGTCTGAATGTTTATGTGTG 60.042 37.037 0.00 0.00 31.88 3.82
2159 2192 6.992123 TGAGTCAAGTCTGAATGTTTATGTGT 59.008 34.615 0.00 0.00 31.88 3.72
2160 2193 7.425577 TGAGTCAAGTCTGAATGTTTATGTG 57.574 36.000 0.00 0.00 31.88 3.21
2161 2194 8.627208 AATGAGTCAAGTCTGAATGTTTATGT 57.373 30.769 0.00 0.00 31.88 2.29
2162 2195 9.903682 AAAATGAGTCAAGTCTGAATGTTTATG 57.096 29.630 0.00 0.00 31.88 1.90
2168 2201 9.270576 CGAAATAAAATGAGTCAAGTCTGAATG 57.729 33.333 0.00 0.00 31.88 2.67
2169 2202 9.219603 TCGAAATAAAATGAGTCAAGTCTGAAT 57.780 29.630 0.00 0.00 31.88 2.57
2170 2203 8.601845 TCGAAATAAAATGAGTCAAGTCTGAA 57.398 30.769 0.00 0.00 31.88 3.02
2171 2204 7.872993 ACTCGAAATAAAATGAGTCAAGTCTGA 59.127 33.333 0.00 0.00 37.07 3.27
2172 2205 8.023050 ACTCGAAATAAAATGAGTCAAGTCTG 57.977 34.615 0.00 0.00 37.07 3.51
2180 2213 5.721232 AGGTCGACTCGAAATAAAATGAGT 58.279 37.500 16.46 0.00 43.95 3.41
2181 2214 6.262323 GAGGTCGACTCGAAATAAAATGAG 57.738 41.667 16.46 0.00 37.72 2.90
2198 2231 2.154798 TTGTGAGCCCTTCGAGGTCG 62.155 60.000 0.00 0.00 41.45 4.79
2199 2232 0.390472 CTTGTGAGCCCTTCGAGGTC 60.390 60.000 0.00 0.00 31.93 3.85
2200 2233 1.674057 CTTGTGAGCCCTTCGAGGT 59.326 57.895 0.00 0.00 31.93 3.85
2201 2234 1.743252 GCTTGTGAGCCCTTCGAGG 60.743 63.158 0.00 0.00 43.29 4.63
2202 2235 3.882025 GCTTGTGAGCCCTTCGAG 58.118 61.111 0.00 0.00 43.29 4.04
2211 2244 2.038295 AGAAGAGGTTGAGGCTTGTGAG 59.962 50.000 0.00 0.00 0.00 3.51
2212 2245 2.050144 AGAAGAGGTTGAGGCTTGTGA 58.950 47.619 0.00 0.00 0.00 3.58
2213 2246 2.551459 CAAGAAGAGGTTGAGGCTTGTG 59.449 50.000 0.00 0.00 0.00 3.33
2214 2247 2.173569 ACAAGAAGAGGTTGAGGCTTGT 59.826 45.455 0.00 0.00 40.55 3.16
2215 2248 2.856222 ACAAGAAGAGGTTGAGGCTTG 58.144 47.619 0.00 0.00 38.81 4.01
2216 2249 3.008485 CCTACAAGAAGAGGTTGAGGCTT 59.992 47.826 0.00 0.00 0.00 4.35
2217 2250 2.569404 CCTACAAGAAGAGGTTGAGGCT 59.431 50.000 0.00 0.00 0.00 4.58
2218 2251 2.303311 ACCTACAAGAAGAGGTTGAGGC 59.697 50.000 0.00 0.00 43.87 4.70
2219 2252 3.835395 AGACCTACAAGAAGAGGTTGAGG 59.165 47.826 0.00 0.00 46.36 3.86
2220 2253 5.105675 GGTAGACCTACAAGAAGAGGTTGAG 60.106 48.000 9.15 0.00 46.36 3.02
2221 2254 4.771054 GGTAGACCTACAAGAAGAGGTTGA 59.229 45.833 9.15 0.00 46.36 3.18
2222 2255 4.081586 GGGTAGACCTACAAGAAGAGGTTG 60.082 50.000 9.15 0.00 46.36 3.77
2223 2256 4.095211 GGGTAGACCTACAAGAAGAGGTT 58.905 47.826 9.15 0.00 46.36 3.50
2225 2258 3.709587 TGGGTAGACCTACAAGAAGAGG 58.290 50.000 9.15 0.00 41.11 3.69
2226 2259 4.712337 ACATGGGTAGACCTACAAGAAGAG 59.288 45.833 9.15 0.00 41.11 2.85
2227 2260 4.466370 CACATGGGTAGACCTACAAGAAGA 59.534 45.833 9.15 0.00 41.11 2.87
2228 2261 4.466370 TCACATGGGTAGACCTACAAGAAG 59.534 45.833 9.15 0.00 41.11 2.85
2229 2262 4.422057 TCACATGGGTAGACCTACAAGAA 58.578 43.478 9.15 0.00 41.11 2.52
2230 2263 4.055710 TCACATGGGTAGACCTACAAGA 57.944 45.455 9.15 0.00 41.11 3.02
2231 2264 5.359194 AATCACATGGGTAGACCTACAAG 57.641 43.478 9.15 0.00 41.11 3.16
2232 2265 4.142026 CGAATCACATGGGTAGACCTACAA 60.142 45.833 9.15 0.00 41.11 2.41
2233 2266 3.383505 CGAATCACATGGGTAGACCTACA 59.616 47.826 9.15 0.00 41.11 2.74
2234 2267 3.635373 TCGAATCACATGGGTAGACCTAC 59.365 47.826 0.00 0.00 41.11 3.18
2235 2268 3.635373 GTCGAATCACATGGGTAGACCTA 59.365 47.826 0.00 0.00 41.11 3.08
2236 2269 2.431057 GTCGAATCACATGGGTAGACCT 59.569 50.000 0.00 0.00 41.11 3.85
2237 2270 2.431057 AGTCGAATCACATGGGTAGACC 59.569 50.000 0.00 0.00 40.81 3.85
2238 2271 3.130516 TCAGTCGAATCACATGGGTAGAC 59.869 47.826 0.00 0.96 0.00 2.59
2239 2272 3.361786 TCAGTCGAATCACATGGGTAGA 58.638 45.455 0.00 0.00 0.00 2.59
2240 2273 3.801114 TCAGTCGAATCACATGGGTAG 57.199 47.619 0.00 0.00 0.00 3.18
2241 2274 3.704061 TCATCAGTCGAATCACATGGGTA 59.296 43.478 0.00 0.00 0.00 3.69
2242 2275 2.501316 TCATCAGTCGAATCACATGGGT 59.499 45.455 0.00 0.00 0.00 4.51
2243 2276 3.183793 TCATCAGTCGAATCACATGGG 57.816 47.619 0.00 0.00 0.00 4.00
2244 2277 4.269603 GTCTTCATCAGTCGAATCACATGG 59.730 45.833 0.00 0.00 0.00 3.66
2245 2278 4.027050 CGTCTTCATCAGTCGAATCACATG 60.027 45.833 0.00 0.00 36.26 3.21
2246 2279 4.108336 CGTCTTCATCAGTCGAATCACAT 58.892 43.478 0.00 0.00 36.26 3.21
2247 2280 3.190535 TCGTCTTCATCAGTCGAATCACA 59.809 43.478 0.00 0.00 39.67 3.58
2248 2281 3.759418 TCGTCTTCATCAGTCGAATCAC 58.241 45.455 0.00 0.00 39.67 3.06
2249 2282 4.096382 TCATCGTCTTCATCAGTCGAATCA 59.904 41.667 0.00 0.00 44.58 2.57
2250 2283 4.602006 TCATCGTCTTCATCAGTCGAATC 58.398 43.478 0.00 0.00 44.58 2.52
2251 2284 4.639135 TCATCGTCTTCATCAGTCGAAT 57.361 40.909 0.00 0.00 44.58 3.34
2252 2285 4.639135 ATCATCGTCTTCATCAGTCGAA 57.361 40.909 0.00 0.00 44.58 3.71
2253 2286 5.050023 GTCTATCATCGTCTTCATCAGTCGA 60.050 44.000 0.00 0.00 45.32 4.20
2254 2287 5.049749 AGTCTATCATCGTCTTCATCAGTCG 60.050 44.000 0.00 0.00 35.59 4.18
2255 2288 6.312399 AGTCTATCATCGTCTTCATCAGTC 57.688 41.667 0.00 0.00 0.00 3.51
2256 2289 6.707440 AAGTCTATCATCGTCTTCATCAGT 57.293 37.500 0.00 0.00 0.00 3.41
2257 2290 6.977502 ACAAAGTCTATCATCGTCTTCATCAG 59.022 38.462 0.00 0.00 0.00 2.90
2258 2291 6.753744 CACAAAGTCTATCATCGTCTTCATCA 59.246 38.462 0.00 0.00 0.00 3.07
2259 2292 6.199908 CCACAAAGTCTATCATCGTCTTCATC 59.800 42.308 0.00 0.00 0.00 2.92
2260 2293 6.045318 CCACAAAGTCTATCATCGTCTTCAT 58.955 40.000 0.00 0.00 0.00 2.57
2261 2294 5.185056 TCCACAAAGTCTATCATCGTCTTCA 59.815 40.000 0.00 0.00 0.00 3.02
2262 2295 5.651530 TCCACAAAGTCTATCATCGTCTTC 58.348 41.667 0.00 0.00 0.00 2.87
2263 2296 5.661056 TCCACAAAGTCTATCATCGTCTT 57.339 39.130 0.00 0.00 0.00 3.01
2264 2297 5.837437 GATCCACAAAGTCTATCATCGTCT 58.163 41.667 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.