Multiple sequence alignment - TraesCS6A01G257000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G257000 chr6A 100.000 3008 0 0 1 3008 479269473 479266466 0.000000e+00 5555.0
1 TraesCS6A01G257000 chr6A 95.420 262 12 0 2219 2480 319205006 319204745 4.640000e-113 418.0
2 TraesCS6A01G257000 chr6A 94.485 272 13 2 2219 2488 602321923 602321652 4.640000e-113 418.0
3 TraesCS6A01G257000 chr6D 94.009 1302 68 6 880 2174 338739927 338738629 0.000000e+00 1964.0
4 TraesCS6A01G257000 chr6D 95.238 126 6 0 2640 2765 119803535 119803660 1.830000e-47 200.0
5 TraesCS6A01G257000 chr6D 86.705 173 16 4 2480 2645 338738530 338738358 5.120000e-43 185.0
6 TraesCS6A01G257000 chr6B 93.106 1262 67 7 880 2134 481740220 481741468 0.000000e+00 1831.0
7 TraesCS6A01G257000 chr5A 91.246 891 47 13 1 886 554351649 554350785 0.000000e+00 1184.0
8 TraesCS6A01G257000 chr5A 91.033 881 46 7 1 877 608851016 608851867 0.000000e+00 1158.0
9 TraesCS6A01G257000 chr5A 95.094 265 13 0 2219 2483 704864888 704864624 4.640000e-113 418.0
10 TraesCS6A01G257000 chr5A 93.004 243 17 0 2766 3008 524125892 524125650 3.690000e-94 355.0
11 TraesCS6A01G257000 chr1A 91.186 885 45 5 1 878 22058830 22057972 0.000000e+00 1171.0
12 TraesCS6A01G257000 chr1A 95.506 267 11 1 2210 2476 447577190 447576925 2.770000e-115 425.0
13 TraesCS6A01G257000 chr1A 95.420 262 12 0 2215 2476 49277964 49277703 4.640000e-113 418.0
14 TraesCS6A01G257000 chr2A 91.230 878 48 6 1 875 580723048 580722197 0.000000e+00 1168.0
15 TraesCS6A01G257000 chr2A 95.420 262 12 0 2216 2477 653300230 653300491 4.640000e-113 418.0
16 TraesCS6A01G257000 chr2A 93.443 122 7 1 2644 2765 133479133 133479013 2.380000e-41 180.0
17 TraesCS6A01G257000 chr7A 90.940 883 48 4 1 877 502384133 502384989 0.000000e+00 1158.0
18 TraesCS6A01G257000 chr7A 95.057 263 12 1 2215 2477 647915359 647915620 2.160000e-111 412.0
19 TraesCS6A01G257000 chr7A 92.157 51 4 0 2480 2530 661295640 661295590 4.160000e-09 73.1
20 TraesCS6A01G257000 chr4B 90.930 882 47 5 1 878 74667602 74666750 0.000000e+00 1155.0
21 TraesCS6A01G257000 chr4B 89.921 883 57 8 1 877 609362002 609362858 0.000000e+00 1109.0
22 TraesCS6A01G257000 chr4B 90.196 204 14 4 684 882 531248446 531248648 8.270000e-66 261.0
23 TraesCS6A01G257000 chr4B 91.045 134 11 1 2633 2765 429241908 429242041 2.380000e-41 180.0
24 TraesCS6A01G257000 chr2B 90.940 883 45 5 1 878 483662837 483661985 0.000000e+00 1155.0
25 TraesCS6A01G257000 chr2B 95.420 262 12 0 2216 2477 780671197 780671458 4.640000e-113 418.0
26 TraesCS6A01G257000 chr2B 94.697 132 7 0 2634 2765 389468174 389468305 3.930000e-49 206.0
27 TraesCS6A01G257000 chr2B 94.488 127 7 0 2639 2765 385568879 385568753 2.370000e-46 196.0
28 TraesCS6A01G257000 chr3B 90.827 883 46 6 1 878 767686858 767686006 0.000000e+00 1149.0
29 TraesCS6A01G257000 chr1B 90.611 884 50 5 1 877 635928120 635928977 0.000000e+00 1142.0
30 TraesCS6A01G257000 chr1B 92.623 244 17 1 2766 3008 342363740 342363983 1.720000e-92 350.0
31 TraesCS6A01G257000 chr1B 92.126 127 10 0 2639 2765 316758713 316758587 2.380000e-41 180.0
32 TraesCS6A01G257000 chr7B 89.932 884 49 8 1 877 164741380 164742230 0.000000e+00 1103.0
33 TraesCS6A01G257000 chr7B 97.500 120 1 2 2650 2769 563740007 563739890 1.410000e-48 204.0
34 TraesCS6A01G257000 chr7B 91.071 56 4 1 2475 2530 629027573 629027519 1.160000e-09 75.0
35 TraesCS6A01G257000 chr4A 93.214 280 16 3 2215 2491 343606738 343606459 2.790000e-110 409.0
36 TraesCS6A01G257000 chr4A 92.593 135 8 2 2631 2765 274745071 274744939 3.060000e-45 193.0
37 TraesCS6A01G257000 chr4D 93.827 243 15 0 2766 3008 46424327 46424569 1.700000e-97 366.0
38 TraesCS6A01G257000 chr4D 92.181 243 19 0 2766 3008 144818279 144818037 7.980000e-91 344.0
39 TraesCS6A01G257000 chr4D 81.928 166 21 5 2480 2645 88148206 88148050 6.770000e-27 132.0
40 TraesCS6A01G257000 chr2D 93.827 243 15 0 2766 3008 584617269 584617511 1.700000e-97 366.0
41 TraesCS6A01G257000 chr2D 93.004 243 17 0 2766 3008 58881110 58880868 3.690000e-94 355.0
42 TraesCS6A01G257000 chr2D 94.697 132 7 0 2634 2765 321775747 321775878 3.930000e-49 206.0
43 TraesCS6A01G257000 chr2D 95.276 127 6 0 2639 2765 29660247 29660121 5.080000e-48 202.0
44 TraesCS6A01G257000 chr2D 91.176 136 9 3 2631 2765 554437365 554437498 6.620000e-42 182.0
45 TraesCS6A01G257000 chr2D 91.603 131 11 0 2632 2762 645683694 645683824 6.620000e-42 182.0
46 TraesCS6A01G257000 chr7D 92.593 243 18 0 2766 3008 403566802 403566560 1.720000e-92 350.0
47 TraesCS6A01G257000 chr7D 91.852 135 8 3 2632 2764 23497771 23497638 5.120000e-43 185.0
48 TraesCS6A01G257000 chr7D 94.828 116 6 0 2650 2765 30293809 30293694 6.620000e-42 182.0
49 TraesCS6A01G257000 chr7D 89.286 56 6 0 2475 2530 572034826 572034771 1.500000e-08 71.3
50 TraesCS6A01G257000 chr3D 92.887 239 15 1 2770 3008 250501569 250501333 2.220000e-91 346.0
51 TraesCS6A01G257000 chr3D 93.846 130 8 0 2636 2765 545912161 545912290 2.370000e-46 196.0
52 TraesCS6A01G257000 chr3D 92.537 134 6 3 2632 2765 455856671 455856542 3.960000e-44 189.0
53 TraesCS6A01G257000 chr5D 92.181 243 19 0 2766 3008 234037532 234037290 7.980000e-91 344.0
54 TraesCS6A01G257000 chrUn 83.226 310 33 14 582 877 221207259 221207563 1.780000e-67 267.0
55 TraesCS6A01G257000 chrUn 83.226 310 33 14 582 877 232062799 232062495 1.780000e-67 267.0
56 TraesCS6A01G257000 chr5B 98.276 116 2 0 2650 2765 262533780 262533665 1.410000e-48 204.0
57 TraesCS6A01G257000 chr1D 96.721 122 4 0 2644 2765 220154134 220154255 1.410000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G257000 chr6A 479266466 479269473 3007 True 5555.0 5555 100.000 1 3008 1 chr6A.!!$R2 3007
1 TraesCS6A01G257000 chr6D 338738358 338739927 1569 True 1074.5 1964 90.357 880 2645 2 chr6D.!!$R1 1765
2 TraesCS6A01G257000 chr6B 481740220 481741468 1248 False 1831.0 1831 93.106 880 2134 1 chr6B.!!$F1 1254
3 TraesCS6A01G257000 chr5A 554350785 554351649 864 True 1184.0 1184 91.246 1 886 1 chr5A.!!$R2 885
4 TraesCS6A01G257000 chr5A 608851016 608851867 851 False 1158.0 1158 91.033 1 877 1 chr5A.!!$F1 876
5 TraesCS6A01G257000 chr1A 22057972 22058830 858 True 1171.0 1171 91.186 1 878 1 chr1A.!!$R1 877
6 TraesCS6A01G257000 chr2A 580722197 580723048 851 True 1168.0 1168 91.230 1 875 1 chr2A.!!$R2 874
7 TraesCS6A01G257000 chr7A 502384133 502384989 856 False 1158.0 1158 90.940 1 877 1 chr7A.!!$F1 876
8 TraesCS6A01G257000 chr4B 74666750 74667602 852 True 1155.0 1155 90.930 1 878 1 chr4B.!!$R1 877
9 TraesCS6A01G257000 chr4B 609362002 609362858 856 False 1109.0 1109 89.921 1 877 1 chr4B.!!$F3 876
10 TraesCS6A01G257000 chr2B 483661985 483662837 852 True 1155.0 1155 90.940 1 878 1 chr2B.!!$R2 877
11 TraesCS6A01G257000 chr3B 767686006 767686858 852 True 1149.0 1149 90.827 1 878 1 chr3B.!!$R1 877
12 TraesCS6A01G257000 chr1B 635928120 635928977 857 False 1142.0 1142 90.611 1 877 1 chr1B.!!$F2 876
13 TraesCS6A01G257000 chr7B 164741380 164742230 850 False 1103.0 1103 89.932 1 877 1 chr7B.!!$F1 876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
979 1004 0.17907 GGGTCCCTCTTCTTCATCGC 60.179 60.0 0.0 0.0 0.0 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2899 2992 0.17902 TATCCCATTTGGCGAGCCTG 60.179 55.0 15.75 5.32 36.94 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 49 1.536284 GCTTCAACCGGACGATAGAGG 60.536 57.143 9.46 0.00 41.38 3.69
60 62 3.515901 ACGATAGAGGAAAGCTTTCACCT 59.484 43.478 33.88 29.21 38.25 4.00
76 82 3.799366 TCACCTAGACGTTGCTCAAAAA 58.201 40.909 0.00 0.00 0.00 1.94
77 83 3.807622 TCACCTAGACGTTGCTCAAAAAG 59.192 43.478 0.00 0.00 0.00 2.27
178 192 4.049186 CGTGTCAAGTTGTTGCTACTACT 58.951 43.478 9.29 9.29 41.18 2.57
257 271 3.822192 CCGGCGATGACGAGGACA 61.822 66.667 9.30 0.00 42.66 4.02
339 353 9.729023 CATCCGATTAACATTTTTGCTACAATA 57.271 29.630 0.00 0.00 0.00 1.90
341 355 8.952278 TCCGATTAACATTTTTGCTACAATAGT 58.048 29.630 0.00 0.00 0.00 2.12
412 428 2.290641 TGACACGGGAAAATGCTACCAT 60.291 45.455 0.00 0.00 0.00 3.55
794 818 1.743996 AAAAAGCAGAGCTCGGATCC 58.256 50.000 18.66 0.00 38.25 3.36
889 914 2.094649 GCGGTGCCCTCTACATATACTC 60.095 54.545 0.00 0.00 0.00 2.59
900 925 7.310921 CCCTCTACATATACTCTGCATCCAAAT 60.311 40.741 0.00 0.00 0.00 2.32
975 1000 1.157751 ACCGGGTCCCTCTTCTTCA 59.842 57.895 6.32 0.00 0.00 3.02
979 1004 0.179070 GGGTCCCTCTTCTTCATCGC 60.179 60.000 0.00 0.00 0.00 4.58
981 1006 1.208293 GGTCCCTCTTCTTCATCGCTT 59.792 52.381 0.00 0.00 0.00 4.68
986 1011 2.418471 CCTCTTCTTCATCGCTTCAGCT 60.418 50.000 0.00 0.00 39.32 4.24
1007 1032 0.597568 CGCAGACTCCAAATGGCAAA 59.402 50.000 0.00 0.00 34.44 3.68
1030 1055 1.520787 GGCGGTATCAACACCTCCG 60.521 63.158 0.00 0.00 43.37 4.63
1299 1324 1.785951 GGACTTCGCTTACAACGCC 59.214 57.895 0.00 0.00 0.00 5.68
1404 1429 2.687200 AGCCTGTACATCCCGGCA 60.687 61.111 21.90 0.00 44.85 5.69
1410 1435 0.908910 TGTACATCCCGGCAATGTCT 59.091 50.000 20.21 4.28 38.31 3.41
1541 1566 1.079266 CACTGCCTCCTCTCTGCAC 60.079 63.158 0.00 0.00 0.00 4.57
1617 1642 2.366480 TTTTTCGGGAGCGACGACCA 62.366 55.000 0.00 0.00 40.45 4.02
1626 1651 2.338500 GAGCGACGACCAAGAGATTTT 58.662 47.619 0.00 0.00 0.00 1.82
1627 1652 2.737252 GAGCGACGACCAAGAGATTTTT 59.263 45.455 0.00 0.00 0.00 1.94
1628 1653 3.921677 AGCGACGACCAAGAGATTTTTA 58.078 40.909 0.00 0.00 0.00 1.52
1629 1654 3.927142 AGCGACGACCAAGAGATTTTTAG 59.073 43.478 0.00 0.00 0.00 1.85
1630 1655 3.678548 GCGACGACCAAGAGATTTTTAGT 59.321 43.478 0.00 0.00 0.00 2.24
1631 1656 4.860907 GCGACGACCAAGAGATTTTTAGTA 59.139 41.667 0.00 0.00 0.00 1.82
1632 1657 5.004535 GCGACGACCAAGAGATTTTTAGTAG 59.995 44.000 0.00 0.00 0.00 2.57
1634 1659 6.585322 CGACGACCAAGAGATTTTTAGTAGTT 59.415 38.462 0.00 0.00 0.00 2.24
1635 1660 7.115947 CGACGACCAAGAGATTTTTAGTAGTTT 59.884 37.037 0.00 0.00 0.00 2.66
1636 1661 9.415544 GACGACCAAGAGATTTTTAGTAGTTTA 57.584 33.333 0.00 0.00 0.00 2.01
1637 1662 9.939802 ACGACCAAGAGATTTTTAGTAGTTTAT 57.060 29.630 0.00 0.00 0.00 1.40
1657 1684 9.302345 AGTTTATACGTGTGATCAGAGTATTTG 57.698 33.333 17.42 0.00 33.68 2.32
1660 1691 4.495422 ACGTGTGATCAGAGTATTTGGAC 58.505 43.478 0.00 0.00 0.00 4.02
1848 1879 0.811616 CCAGTGGAGCCATAAGACGC 60.812 60.000 1.68 0.00 0.00 5.19
1872 1903 2.791927 GGCGAAAGATTGGACGGC 59.208 61.111 0.00 0.00 42.98 5.68
1980 2011 3.057315 AGTGCATTGCTTATTTGAACGCT 60.057 39.130 10.49 0.00 0.00 5.07
2010 2041 4.166888 GCCAGCGCCTCCTGATCA 62.167 66.667 2.29 0.00 34.77 2.92
2088 2119 0.250295 TTGAGTCCTTGTTGCTCGGG 60.250 55.000 0.00 0.00 32.32 5.14
2154 2185 2.289195 ACCACATGTGTGTAGTAACGGG 60.289 50.000 23.79 6.97 44.21 5.28
2155 2186 2.028839 CCACATGTGTGTAGTAACGGGA 60.029 50.000 23.79 0.00 44.21 5.14
2159 2193 3.096489 TGTGTGTAGTAACGGGAACAC 57.904 47.619 0.00 0.00 42.00 3.32
2169 2203 1.107114 ACGGGAACACATTTTGCACA 58.893 45.000 0.00 0.00 0.00 4.57
2174 2208 4.236935 GGGAACACATTTTGCACATAGTG 58.763 43.478 6.91 6.91 36.51 2.74
2183 2217 4.643795 CACATAGTGCCACAGGGG 57.356 61.111 0.00 0.00 40.85 4.79
2223 2309 8.697507 ACACAATAAAAGGATCATATTCCCTC 57.302 34.615 0.00 0.00 36.35 4.30
2224 2310 8.281531 ACACAATAAAAGGATCATATTCCCTCA 58.718 33.333 0.00 0.00 36.35 3.86
2225 2311 8.790718 CACAATAAAAGGATCATATTCCCTCAG 58.209 37.037 0.00 0.00 36.35 3.35
2226 2312 7.946776 ACAATAAAAGGATCATATTCCCTCAGG 59.053 37.037 0.00 0.00 36.35 3.86
2227 2313 7.654287 ATAAAAGGATCATATTCCCTCAGGT 57.346 36.000 0.00 0.00 36.35 4.00
2228 2314 5.574970 AAAGGATCATATTCCCTCAGGTC 57.425 43.478 0.00 0.00 36.35 3.85
2229 2315 3.525862 AGGATCATATTCCCTCAGGTCC 58.474 50.000 0.00 0.00 36.35 4.46
2230 2316 3.145667 AGGATCATATTCCCTCAGGTCCT 59.854 47.826 0.00 0.00 36.35 3.85
2231 2317 3.913163 GGATCATATTCCCTCAGGTCCTT 59.087 47.826 0.00 0.00 0.00 3.36
2232 2318 4.352298 GGATCATATTCCCTCAGGTCCTTT 59.648 45.833 0.00 0.00 0.00 3.11
2233 2319 5.163045 GGATCATATTCCCTCAGGTCCTTTT 60.163 44.000 0.00 0.00 0.00 2.27
2234 2320 5.796502 TCATATTCCCTCAGGTCCTTTTT 57.203 39.130 0.00 0.00 0.00 1.94
2235 2321 6.901615 TCATATTCCCTCAGGTCCTTTTTA 57.098 37.500 0.00 0.00 0.00 1.52
2236 2322 6.900194 TCATATTCCCTCAGGTCCTTTTTAG 58.100 40.000 0.00 0.00 0.00 1.85
2237 2323 6.447084 TCATATTCCCTCAGGTCCTTTTTAGT 59.553 38.462 0.00 0.00 0.00 2.24
2238 2324 5.600669 ATTCCCTCAGGTCCTTTTTAGTT 57.399 39.130 0.00 0.00 0.00 2.24
2239 2325 4.635699 TCCCTCAGGTCCTTTTTAGTTC 57.364 45.455 0.00 0.00 0.00 3.01
2240 2326 3.007614 TCCCTCAGGTCCTTTTTAGTTCG 59.992 47.826 0.00 0.00 0.00 3.95
2241 2327 2.742589 CCTCAGGTCCTTTTTAGTTCGC 59.257 50.000 0.00 0.00 0.00 4.70
2242 2328 3.399330 CTCAGGTCCTTTTTAGTTCGCA 58.601 45.455 0.00 0.00 0.00 5.10
2243 2329 4.003648 CTCAGGTCCTTTTTAGTTCGCAT 58.996 43.478 0.00 0.00 0.00 4.73
2244 2330 5.155278 TCAGGTCCTTTTTAGTTCGCATA 57.845 39.130 0.00 0.00 0.00 3.14
2245 2331 5.741011 TCAGGTCCTTTTTAGTTCGCATAT 58.259 37.500 0.00 0.00 0.00 1.78
2246 2332 6.880484 TCAGGTCCTTTTTAGTTCGCATATA 58.120 36.000 0.00 0.00 0.00 0.86
2247 2333 7.332557 TCAGGTCCTTTTTAGTTCGCATATAA 58.667 34.615 0.00 0.00 0.00 0.98
2248 2334 7.494625 TCAGGTCCTTTTTAGTTCGCATATAAG 59.505 37.037 0.00 0.00 0.00 1.73
2249 2335 7.494625 CAGGTCCTTTTTAGTTCGCATATAAGA 59.505 37.037 0.00 0.00 0.00 2.10
2250 2336 8.211629 AGGTCCTTTTTAGTTCGCATATAAGAT 58.788 33.333 0.00 0.00 0.00 2.40
2251 2337 8.837389 GGTCCTTTTTAGTTCGCATATAAGATT 58.163 33.333 0.00 0.00 0.00 2.40
2258 2344 9.594478 TTTAGTTCGCATATAAGATTTGACTCA 57.406 29.630 0.00 0.00 0.00 3.41
2259 2345 9.594478 TTAGTTCGCATATAAGATTTGACTCAA 57.406 29.630 0.00 0.00 0.00 3.02
2260 2346 8.136057 AGTTCGCATATAAGATTTGACTCAAG 57.864 34.615 0.00 0.00 0.00 3.02
2261 2347 7.766278 AGTTCGCATATAAGATTTGACTCAAGT 59.234 33.333 0.00 0.00 0.00 3.16
2262 2348 7.700322 TCGCATATAAGATTTGACTCAAGTC 57.300 36.000 6.23 6.23 44.97 3.01
2277 2363 7.541122 GACTCAAGTCAAGTCTTGTAAAGTT 57.459 36.000 12.30 0.34 43.81 2.66
2278 2364 7.923414 ACTCAAGTCAAGTCTTGTAAAGTTT 57.077 32.000 12.30 0.00 46.34 2.66
2279 2365 7.752695 ACTCAAGTCAAGTCTTGTAAAGTTTG 58.247 34.615 12.30 8.92 46.34 2.93
2280 2366 7.606456 ACTCAAGTCAAGTCTTGTAAAGTTTGA 59.394 33.333 12.30 11.84 46.34 2.69
2285 2371 6.848451 TCAAGTCTTGTAAAGTTTGACCAAC 58.152 36.000 12.30 0.00 46.34 3.77
2321 2407 9.829507 AAAAATACAAACATCCACAATCTGAAA 57.170 25.926 0.00 0.00 0.00 2.69
2323 2409 9.643693 AAATACAAACATCCACAATCTGAAATC 57.356 29.630 0.00 0.00 0.00 2.17
2324 2410 6.653526 ACAAACATCCACAATCTGAAATCA 57.346 33.333 0.00 0.00 0.00 2.57
2325 2411 7.053316 ACAAACATCCACAATCTGAAATCAA 57.947 32.000 0.00 0.00 0.00 2.57
2326 2412 7.673180 ACAAACATCCACAATCTGAAATCAAT 58.327 30.769 0.00 0.00 0.00 2.57
2327 2413 8.805175 ACAAACATCCACAATCTGAAATCAATA 58.195 29.630 0.00 0.00 0.00 1.90
2328 2414 9.811995 CAAACATCCACAATCTGAAATCAATAT 57.188 29.630 0.00 0.00 0.00 1.28
2330 2416 8.756486 ACATCCACAATCTGAAATCAATATCA 57.244 30.769 0.00 0.00 0.00 2.15
2331 2417 9.192642 ACATCCACAATCTGAAATCAATATCAA 57.807 29.630 0.00 0.00 0.00 2.57
2380 2466 8.916628 TCATATTGTATAACTTTAGCATGGCA 57.083 30.769 0.00 0.00 0.00 4.92
2381 2467 9.002600 TCATATTGTATAACTTTAGCATGGCAG 57.997 33.333 0.00 0.00 0.00 4.85
2382 2468 9.002600 CATATTGTATAACTTTAGCATGGCAGA 57.997 33.333 0.00 0.00 0.00 4.26
2383 2469 9.745018 ATATTGTATAACTTTAGCATGGCAGAT 57.255 29.630 0.00 0.00 0.00 2.90
2384 2470 6.866010 TGTATAACTTTAGCATGGCAGATG 57.134 37.500 0.00 0.00 0.00 2.90
2385 2471 6.356556 TGTATAACTTTAGCATGGCAGATGT 58.643 36.000 0.00 0.00 0.00 3.06
2386 2472 6.828273 TGTATAACTTTAGCATGGCAGATGTT 59.172 34.615 0.00 0.00 0.00 2.71
2387 2473 4.445452 AACTTTAGCATGGCAGATGTTG 57.555 40.909 0.00 0.00 0.00 3.33
2388 2474 3.689347 ACTTTAGCATGGCAGATGTTGA 58.311 40.909 0.00 0.00 0.00 3.18
2389 2475 4.275810 ACTTTAGCATGGCAGATGTTGAT 58.724 39.130 0.00 0.00 0.00 2.57
2390 2476 5.439721 ACTTTAGCATGGCAGATGTTGATA 58.560 37.500 0.00 0.00 0.00 2.15
2391 2477 6.066690 ACTTTAGCATGGCAGATGTTGATAT 58.933 36.000 0.00 0.00 0.00 1.63
2392 2478 6.548622 ACTTTAGCATGGCAGATGTTGATATT 59.451 34.615 0.00 0.00 0.00 1.28
2393 2479 6.964807 TTAGCATGGCAGATGTTGATATTT 57.035 33.333 0.00 0.00 0.00 1.40
2394 2480 5.864418 AGCATGGCAGATGTTGATATTTT 57.136 34.783 0.00 0.00 0.00 1.82
2395 2481 6.229936 AGCATGGCAGATGTTGATATTTTT 57.770 33.333 0.00 0.00 0.00 1.94
2422 2508 9.438228 TCATATAAATACGGTCAAACTTTGTGA 57.562 29.630 1.44 0.00 0.00 3.58
2450 2536 9.928236 GTTTGACTTCAGAGAATTCTAATATGC 57.072 33.333 8.25 0.00 30.73 3.14
2451 2537 9.671279 TTTGACTTCAGAGAATTCTAATATGCA 57.329 29.630 8.25 0.00 30.73 3.96
2452 2538 8.883954 TGACTTCAGAGAATTCTAATATGCAG 57.116 34.615 8.25 7.58 30.73 4.41
2453 2539 8.699130 TGACTTCAGAGAATTCTAATATGCAGA 58.301 33.333 8.25 0.00 30.73 4.26
2454 2540 9.195411 GACTTCAGAGAATTCTAATATGCAGAG 57.805 37.037 8.25 6.79 30.73 3.35
2455 2541 8.703743 ACTTCAGAGAATTCTAATATGCAGAGT 58.296 33.333 8.25 7.29 30.73 3.24
2465 2551 8.732746 TTCTAATATGCAGAGTAAAAAGGACC 57.267 34.615 0.00 0.00 0.00 4.46
2466 2552 6.984474 TCTAATATGCAGAGTAAAAAGGACCG 59.016 38.462 0.00 0.00 0.00 4.79
2467 2553 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
2468 2554 1.271163 TGCAGAGTAAAAAGGACCGGG 60.271 52.381 6.32 0.00 0.00 5.73
2469 2555 1.949079 GCAGAGTAAAAAGGACCGGGG 60.949 57.143 6.32 0.00 0.00 5.73
2470 2556 0.989602 AGAGTAAAAAGGACCGGGGG 59.010 55.000 6.32 0.00 0.00 5.40
2509 2595 6.384224 TCTTGATGCAAAGCAAATAGACAAG 58.616 36.000 0.00 0.00 43.62 3.16
2531 2617 8.612619 ACAAGATAAGATTATGCTTTGGTTACG 58.387 33.333 0.00 0.00 0.00 3.18
2533 2619 8.366671 AGATAAGATTATGCTTTGGTTACGAC 57.633 34.615 0.00 0.00 0.00 4.34
2561 2647 9.824534 AAGTACAAATTTTGCAACTTTTTCTTG 57.175 25.926 17.98 0.00 37.05 3.02
2603 2696 5.679734 ATGTGTCAATGATTAATCCGCTC 57.320 39.130 12.90 1.36 0.00 5.03
2650 2743 8.568617 AAGAGATTAATTGGTATGTACCCTCT 57.431 34.615 6.74 6.46 45.87 3.69
2651 2744 8.196378 AGAGATTAATTGGTATGTACCCTCTC 57.804 38.462 6.74 8.16 45.87 3.20
2652 2745 7.235812 AGAGATTAATTGGTATGTACCCTCTCC 59.764 40.741 6.74 0.00 45.87 3.71
2653 2746 5.540400 TTAATTGGTATGTACCCTCTCCG 57.460 43.478 6.74 0.00 45.87 4.63
2654 2747 2.537633 TTGGTATGTACCCTCTCCGT 57.462 50.000 6.74 0.00 45.87 4.69
2655 2748 2.537633 TGGTATGTACCCTCTCCGTT 57.462 50.000 6.74 0.00 45.87 4.44
2656 2749 2.823959 TGGTATGTACCCTCTCCGTTT 58.176 47.619 6.74 0.00 45.87 3.60
2657 2750 2.762327 TGGTATGTACCCTCTCCGTTTC 59.238 50.000 6.74 0.00 45.87 2.78
2658 2751 3.029570 GGTATGTACCCTCTCCGTTTCT 58.970 50.000 0.00 0.00 40.53 2.52
2659 2752 4.210331 GGTATGTACCCTCTCCGTTTCTA 58.790 47.826 0.00 0.00 40.53 2.10
2660 2753 4.646492 GGTATGTACCCTCTCCGTTTCTAA 59.354 45.833 0.00 0.00 40.53 2.10
2661 2754 5.127682 GGTATGTACCCTCTCCGTTTCTAAA 59.872 44.000 0.00 0.00 40.53 1.85
2662 2755 5.952347 ATGTACCCTCTCCGTTTCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
2663 2756 7.014615 GGTATGTACCCTCTCCGTTTCTAAATA 59.985 40.741 0.00 0.00 40.53 1.40
2664 2757 7.613551 ATGTACCCTCTCCGTTTCTAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
2665 2758 8.716674 ATGTACCCTCTCCGTTTCTAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
2666 2759 8.537728 TGTACCCTCTCCGTTTCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2667 2760 8.636213 TGTACCCTCTCCGTTTCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
2668 2761 7.672122 ACCCTCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
2669 2762 7.724287 ACCCTCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
2670 2763 7.564292 ACCCTCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
2671 2764 8.422566 CCCTCTCCGTTTCTAAATATAAGTCTT 58.577 37.037 0.00 0.00 0.00 3.01
2672 2765 9.819267 CCTCTCCGTTTCTAAATATAAGTCTTT 57.181 33.333 0.00 0.00 0.00 2.52
2691 2784 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
2692 2785 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
2697 2790 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
2698 2791 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
2699 2792 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
2700 2793 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
2701 2794 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
2702 2795 8.402798 ACATTTCAAATGGACTACAACATACA 57.597 30.769 14.70 0.00 0.00 2.29
2703 2796 8.855110 ACATTTCAAATGGACTACAACATACAA 58.145 29.630 14.70 0.00 0.00 2.41
2704 2797 9.689976 CATTTCAAATGGACTACAACATACAAA 57.310 29.630 1.73 0.00 0.00 2.83
2706 2799 9.689976 TTTCAAATGGACTACAACATACAAATG 57.310 29.630 0.00 0.00 39.17 2.32
2708 2801 9.508642 TCAAATGGACTACAACATACAAATGTA 57.491 29.630 0.00 0.00 45.79 2.29
2748 2841 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2749 2842 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2750 2843 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2751 2844 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2752 2845 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2753 2846 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2754 2847 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2755 2848 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2756 2849 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2757 2850 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2758 2851 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2759 2852 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2760 2853 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2761 2854 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2762 2855 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2763 2856 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2764 2857 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2765 2858 2.194271 GCTCCGTATGTAGTCACTTGC 58.806 52.381 0.00 0.00 0.00 4.01
2766 2859 2.159226 GCTCCGTATGTAGTCACTTGCT 60.159 50.000 0.00 0.00 0.00 3.91
2767 2860 3.676324 GCTCCGTATGTAGTCACTTGCTT 60.676 47.826 0.00 0.00 0.00 3.91
2768 2861 4.439700 GCTCCGTATGTAGTCACTTGCTTA 60.440 45.833 0.00 0.00 0.00 3.09
2769 2862 5.736492 GCTCCGTATGTAGTCACTTGCTTAT 60.736 44.000 0.00 0.00 0.00 1.73
2770 2863 6.216801 TCCGTATGTAGTCACTTGCTTATT 57.783 37.500 0.00 0.00 0.00 1.40
2771 2864 7.337480 TCCGTATGTAGTCACTTGCTTATTA 57.663 36.000 0.00 0.00 0.00 0.98
2772 2865 7.774134 TCCGTATGTAGTCACTTGCTTATTAA 58.226 34.615 0.00 0.00 0.00 1.40
2773 2866 8.418662 TCCGTATGTAGTCACTTGCTTATTAAT 58.581 33.333 0.00 0.00 0.00 1.40
2774 2867 9.042008 CCGTATGTAGTCACTTGCTTATTAATT 57.958 33.333 0.00 0.00 0.00 1.40
2778 2871 8.630054 TGTAGTCACTTGCTTATTAATTTGGT 57.370 30.769 0.00 0.00 0.00 3.67
2779 2872 9.073475 TGTAGTCACTTGCTTATTAATTTGGTT 57.927 29.630 0.00 0.00 0.00 3.67
2780 2873 9.556030 GTAGTCACTTGCTTATTAATTTGGTTC 57.444 33.333 0.00 0.00 0.00 3.62
2781 2874 8.409358 AGTCACTTGCTTATTAATTTGGTTCT 57.591 30.769 0.00 0.00 0.00 3.01
2782 2875 8.515414 AGTCACTTGCTTATTAATTTGGTTCTC 58.485 33.333 0.00 0.00 0.00 2.87
2783 2876 8.296713 GTCACTTGCTTATTAATTTGGTTCTCA 58.703 33.333 0.00 0.00 0.00 3.27
2784 2877 8.296713 TCACTTGCTTATTAATTTGGTTCTCAC 58.703 33.333 0.00 0.00 0.00 3.51
2785 2878 7.271223 CACTTGCTTATTAATTTGGTTCTCACG 59.729 37.037 0.00 0.00 0.00 4.35
2786 2879 7.174253 ACTTGCTTATTAATTTGGTTCTCACGA 59.826 33.333 0.00 0.00 0.00 4.35
2787 2880 7.072177 TGCTTATTAATTTGGTTCTCACGAG 57.928 36.000 0.00 0.00 0.00 4.18
2788 2881 6.653320 TGCTTATTAATTTGGTTCTCACGAGT 59.347 34.615 0.00 0.00 0.00 4.18
2789 2882 7.820386 TGCTTATTAATTTGGTTCTCACGAGTA 59.180 33.333 0.00 0.00 0.00 2.59
2790 2883 8.827677 GCTTATTAATTTGGTTCTCACGAGTAT 58.172 33.333 0.00 0.00 0.00 2.12
2792 2885 4.946784 AATTTGGTTCTCACGAGTATGC 57.053 40.909 0.00 0.00 0.00 3.14
2793 2886 2.380084 TTGGTTCTCACGAGTATGCC 57.620 50.000 0.00 0.00 0.00 4.40
2794 2887 1.262417 TGGTTCTCACGAGTATGCCA 58.738 50.000 0.00 0.00 0.00 4.92
2795 2888 1.621317 TGGTTCTCACGAGTATGCCAA 59.379 47.619 0.00 0.00 0.00 4.52
2796 2889 2.236146 TGGTTCTCACGAGTATGCCAAT 59.764 45.455 0.00 0.00 0.00 3.16
2797 2890 2.609459 GGTTCTCACGAGTATGCCAATG 59.391 50.000 0.00 0.00 0.00 2.82
2798 2891 3.262420 GTTCTCACGAGTATGCCAATGT 58.738 45.455 0.00 0.00 0.00 2.71
2799 2892 3.610040 TCTCACGAGTATGCCAATGTT 57.390 42.857 0.00 0.00 0.00 2.71
2800 2893 3.937814 TCTCACGAGTATGCCAATGTTT 58.062 40.909 0.00 0.00 0.00 2.83
2801 2894 3.932710 TCTCACGAGTATGCCAATGTTTC 59.067 43.478 0.00 0.00 0.00 2.78
2802 2895 3.935203 CTCACGAGTATGCCAATGTTTCT 59.065 43.478 0.00 0.00 0.00 2.52
2803 2896 3.932710 TCACGAGTATGCCAATGTTTCTC 59.067 43.478 0.00 0.00 0.00 2.87
2804 2897 3.935203 CACGAGTATGCCAATGTTTCTCT 59.065 43.478 0.00 0.00 0.00 3.10
2805 2898 4.393062 CACGAGTATGCCAATGTTTCTCTT 59.607 41.667 0.00 0.00 0.00 2.85
2806 2899 4.393062 ACGAGTATGCCAATGTTTCTCTTG 59.607 41.667 0.00 0.00 0.00 3.02
2807 2900 4.393062 CGAGTATGCCAATGTTTCTCTTGT 59.607 41.667 0.00 0.00 0.00 3.16
2808 2901 5.446473 CGAGTATGCCAATGTTTCTCTTGTC 60.446 44.000 0.00 0.00 0.00 3.18
2809 2902 4.702131 AGTATGCCAATGTTTCTCTTGTCC 59.298 41.667 0.00 0.00 0.00 4.02
2810 2903 3.228188 TGCCAATGTTTCTCTTGTCCT 57.772 42.857 0.00 0.00 0.00 3.85
2811 2904 3.565307 TGCCAATGTTTCTCTTGTCCTT 58.435 40.909 0.00 0.00 0.00 3.36
2812 2905 3.960102 TGCCAATGTTTCTCTTGTCCTTT 59.040 39.130 0.00 0.00 0.00 3.11
2813 2906 4.405358 TGCCAATGTTTCTCTTGTCCTTTT 59.595 37.500 0.00 0.00 0.00 2.27
2814 2907 5.104982 TGCCAATGTTTCTCTTGTCCTTTTT 60.105 36.000 0.00 0.00 0.00 1.94
2815 2908 5.463392 GCCAATGTTTCTCTTGTCCTTTTTC 59.537 40.000 0.00 0.00 0.00 2.29
2816 2909 5.687285 CCAATGTTTCTCTTGTCCTTTTTCG 59.313 40.000 0.00 0.00 0.00 3.46
2817 2910 6.459573 CCAATGTTTCTCTTGTCCTTTTTCGA 60.460 38.462 0.00 0.00 0.00 3.71
2818 2911 5.734855 TGTTTCTCTTGTCCTTTTTCGAG 57.265 39.130 0.00 0.00 0.00 4.04
2819 2912 5.424757 TGTTTCTCTTGTCCTTTTTCGAGA 58.575 37.500 0.00 0.00 0.00 4.04
2820 2913 6.055588 TGTTTCTCTTGTCCTTTTTCGAGAT 58.944 36.000 0.00 0.00 0.00 2.75
2821 2914 6.542370 TGTTTCTCTTGTCCTTTTTCGAGATT 59.458 34.615 0.00 0.00 0.00 2.40
2822 2915 6.787085 TTCTCTTGTCCTTTTTCGAGATTC 57.213 37.500 0.00 0.00 0.00 2.52
2823 2916 5.238583 TCTCTTGTCCTTTTTCGAGATTCC 58.761 41.667 0.00 0.00 0.00 3.01
2824 2917 4.968259 TCTTGTCCTTTTTCGAGATTCCA 58.032 39.130 0.00 0.00 0.00 3.53
2825 2918 4.997395 TCTTGTCCTTTTTCGAGATTCCAG 59.003 41.667 0.00 0.00 0.00 3.86
2826 2919 4.351874 TGTCCTTTTTCGAGATTCCAGT 57.648 40.909 0.00 0.00 0.00 4.00
2827 2920 4.714632 TGTCCTTTTTCGAGATTCCAGTT 58.285 39.130 0.00 0.00 0.00 3.16
2828 2921 5.860611 TGTCCTTTTTCGAGATTCCAGTTA 58.139 37.500 0.00 0.00 0.00 2.24
2829 2922 5.932303 TGTCCTTTTTCGAGATTCCAGTTAG 59.068 40.000 0.00 0.00 0.00 2.34
2830 2923 6.164176 GTCCTTTTTCGAGATTCCAGTTAGA 58.836 40.000 0.00 0.00 0.00 2.10
2831 2924 6.311690 GTCCTTTTTCGAGATTCCAGTTAGAG 59.688 42.308 0.00 0.00 0.00 2.43
2832 2925 6.014499 TCCTTTTTCGAGATTCCAGTTAGAGT 60.014 38.462 0.00 0.00 0.00 3.24
2833 2926 6.651225 CCTTTTTCGAGATTCCAGTTAGAGTT 59.349 38.462 0.00 0.00 0.00 3.01
2834 2927 7.817962 CCTTTTTCGAGATTCCAGTTAGAGTTA 59.182 37.037 0.00 0.00 0.00 2.24
2835 2928 8.758633 TTTTTCGAGATTCCAGTTAGAGTTAG 57.241 34.615 0.00 0.00 0.00 2.34
2836 2929 6.452494 TTCGAGATTCCAGTTAGAGTTAGG 57.548 41.667 0.00 0.00 0.00 2.69
2837 2930 5.752650 TCGAGATTCCAGTTAGAGTTAGGA 58.247 41.667 0.00 0.00 0.00 2.94
2838 2931 6.185511 TCGAGATTCCAGTTAGAGTTAGGAA 58.814 40.000 0.00 0.00 42.05 3.36
2839 2932 6.662234 TCGAGATTCCAGTTAGAGTTAGGAAA 59.338 38.462 0.00 0.00 41.27 3.13
2840 2933 7.177921 TCGAGATTCCAGTTAGAGTTAGGAAAA 59.822 37.037 0.00 0.00 41.27 2.29
2841 2934 7.489757 CGAGATTCCAGTTAGAGTTAGGAAAAG 59.510 40.741 0.00 0.00 41.27 2.27
2842 2935 7.625469 AGATTCCAGTTAGAGTTAGGAAAAGG 58.375 38.462 0.00 0.00 41.27 3.11
2843 2936 5.161943 TCCAGTTAGAGTTAGGAAAAGGC 57.838 43.478 0.00 0.00 0.00 4.35
2844 2937 4.844655 TCCAGTTAGAGTTAGGAAAAGGCT 59.155 41.667 0.00 0.00 0.00 4.58
2845 2938 4.938226 CCAGTTAGAGTTAGGAAAAGGCTG 59.062 45.833 0.00 0.00 0.00 4.85
2846 2939 4.938226 CAGTTAGAGTTAGGAAAAGGCTGG 59.062 45.833 0.00 0.00 0.00 4.85
2847 2940 4.844655 AGTTAGAGTTAGGAAAAGGCTGGA 59.155 41.667 0.00 0.00 0.00 3.86
2848 2941 3.704800 AGAGTTAGGAAAAGGCTGGAC 57.295 47.619 0.00 0.00 0.00 4.02
2849 2942 3.252351 AGAGTTAGGAAAAGGCTGGACT 58.748 45.455 0.00 0.00 0.00 3.85
2850 2943 3.653352 AGAGTTAGGAAAAGGCTGGACTT 59.347 43.478 0.00 0.00 0.00 3.01
2851 2944 4.004314 GAGTTAGGAAAAGGCTGGACTTC 58.996 47.826 0.00 0.00 0.00 3.01
2852 2945 3.653352 AGTTAGGAAAAGGCTGGACTTCT 59.347 43.478 0.00 0.00 0.00 2.85
2853 2946 4.844655 AGTTAGGAAAAGGCTGGACTTCTA 59.155 41.667 0.00 0.00 0.00 2.10
2854 2947 5.489278 AGTTAGGAAAAGGCTGGACTTCTAT 59.511 40.000 0.00 0.00 0.00 1.98
2855 2948 4.495690 AGGAAAAGGCTGGACTTCTATC 57.504 45.455 0.00 0.00 0.00 2.08
2856 2949 3.118592 AGGAAAAGGCTGGACTTCTATCG 60.119 47.826 0.00 0.00 0.00 2.92
2857 2950 3.118738 GGAAAAGGCTGGACTTCTATCGA 60.119 47.826 0.00 0.00 0.00 3.59
2858 2951 4.443598 GGAAAAGGCTGGACTTCTATCGAT 60.444 45.833 2.16 2.16 0.00 3.59
2859 2952 4.329462 AAAGGCTGGACTTCTATCGATC 57.671 45.455 0.00 0.00 0.00 3.69
2860 2953 2.243810 AGGCTGGACTTCTATCGATCC 58.756 52.381 0.00 0.00 0.00 3.36
2861 2954 1.273886 GGCTGGACTTCTATCGATCCC 59.726 57.143 0.00 0.00 0.00 3.85
2862 2955 1.068194 GCTGGACTTCTATCGATCCCG 60.068 57.143 0.00 0.00 37.07 5.14
2879 2972 2.670635 CGATTCTTCGGGCAGAGTG 58.329 57.895 0.00 0.00 41.74 3.51
2880 2973 0.173481 CGATTCTTCGGGCAGAGTGA 59.827 55.000 0.00 0.00 41.74 3.41
2881 2974 1.202463 CGATTCTTCGGGCAGAGTGAT 60.202 52.381 0.00 0.00 41.74 3.06
2882 2975 2.208431 GATTCTTCGGGCAGAGTGATG 58.792 52.381 0.00 0.00 0.00 3.07
2883 2976 1.266178 TTCTTCGGGCAGAGTGATGA 58.734 50.000 0.00 0.00 0.00 2.92
2884 2977 1.266178 TCTTCGGGCAGAGTGATGAA 58.734 50.000 0.00 0.00 0.00 2.57
2885 2978 1.066858 TCTTCGGGCAGAGTGATGAAC 60.067 52.381 0.00 0.00 0.00 3.18
2886 2979 0.976641 TTCGGGCAGAGTGATGAACT 59.023 50.000 0.00 0.00 43.85 3.01
2887 2980 1.847328 TCGGGCAGAGTGATGAACTA 58.153 50.000 0.00 0.00 40.07 2.24
2888 2981 2.176045 TCGGGCAGAGTGATGAACTAA 58.824 47.619 0.00 0.00 40.07 2.24
2889 2982 2.565391 TCGGGCAGAGTGATGAACTAAA 59.435 45.455 0.00 0.00 40.07 1.85
2890 2983 2.932614 CGGGCAGAGTGATGAACTAAAG 59.067 50.000 0.00 0.00 40.07 1.85
2891 2984 2.680339 GGGCAGAGTGATGAACTAAAGC 59.320 50.000 0.00 0.00 40.07 3.51
2892 2985 2.349886 GGCAGAGTGATGAACTAAAGCG 59.650 50.000 0.00 0.00 40.07 4.68
2893 2986 3.254060 GCAGAGTGATGAACTAAAGCGA 58.746 45.455 0.00 0.00 40.07 4.93
2894 2987 3.679980 GCAGAGTGATGAACTAAAGCGAA 59.320 43.478 0.00 0.00 40.07 4.70
2895 2988 4.152402 GCAGAGTGATGAACTAAAGCGAAA 59.848 41.667 0.00 0.00 40.07 3.46
2896 2989 5.334105 GCAGAGTGATGAACTAAAGCGAAAA 60.334 40.000 0.00 0.00 40.07 2.29
2897 2990 6.621596 GCAGAGTGATGAACTAAAGCGAAAAT 60.622 38.462 0.00 0.00 40.07 1.82
2898 2991 7.413000 GCAGAGTGATGAACTAAAGCGAAAATA 60.413 37.037 0.00 0.00 40.07 1.40
2899 2992 7.900352 CAGAGTGATGAACTAAAGCGAAAATAC 59.100 37.037 0.00 0.00 40.07 1.89
2900 2993 7.602644 AGAGTGATGAACTAAAGCGAAAATACA 59.397 33.333 0.00 0.00 40.07 2.29
2901 2994 7.743104 AGTGATGAACTAAAGCGAAAATACAG 58.257 34.615 0.00 0.00 37.36 2.74
2902 2995 6.961554 GTGATGAACTAAAGCGAAAATACAGG 59.038 38.462 0.00 0.00 0.00 4.00
2903 2996 5.291293 TGAACTAAAGCGAAAATACAGGC 57.709 39.130 0.00 0.00 0.00 4.85
2904 2997 5.001232 TGAACTAAAGCGAAAATACAGGCT 58.999 37.500 0.00 0.00 37.33 4.58
2905 2998 5.121768 TGAACTAAAGCGAAAATACAGGCTC 59.878 40.000 0.00 0.00 33.99 4.70
2906 2999 3.617263 ACTAAAGCGAAAATACAGGCTCG 59.383 43.478 0.00 0.00 33.99 5.03
2909 3002 2.762360 CGAAAATACAGGCTCGCCA 58.238 52.632 11.02 0.00 38.92 5.69
2910 3003 1.083489 CGAAAATACAGGCTCGCCAA 58.917 50.000 11.02 0.00 38.92 4.52
2911 3004 1.466950 CGAAAATACAGGCTCGCCAAA 59.533 47.619 11.02 0.00 38.92 3.28
2912 3005 2.097466 CGAAAATACAGGCTCGCCAAAT 59.903 45.455 11.02 0.00 38.92 2.32
2913 3006 3.438360 GAAAATACAGGCTCGCCAAATG 58.562 45.455 11.02 2.44 38.92 2.32
2914 3007 1.392589 AATACAGGCTCGCCAAATGG 58.607 50.000 11.02 0.00 38.92 3.16
2915 3008 0.466189 ATACAGGCTCGCCAAATGGG 60.466 55.000 11.02 0.00 38.92 4.00
2916 3009 1.558167 TACAGGCTCGCCAAATGGGA 61.558 55.000 11.02 0.00 40.01 4.37
2917 3010 1.454479 CAGGCTCGCCAAATGGGAT 60.454 57.895 11.02 0.00 40.01 3.85
2918 3011 0.179020 CAGGCTCGCCAAATGGGATA 60.179 55.000 11.02 0.00 40.01 2.59
2919 3012 0.773644 AGGCTCGCCAAATGGGATAT 59.226 50.000 11.02 0.00 40.01 1.63
2920 3013 1.145738 AGGCTCGCCAAATGGGATATT 59.854 47.619 11.02 0.00 40.01 1.28
2921 3014 2.375174 AGGCTCGCCAAATGGGATATTA 59.625 45.455 11.02 0.00 40.01 0.98
2922 3015 3.010584 AGGCTCGCCAAATGGGATATTAT 59.989 43.478 11.02 0.00 40.01 1.28
2923 3016 3.763897 GGCTCGCCAAATGGGATATTATT 59.236 43.478 2.41 0.00 40.01 1.40
2924 3017 4.220602 GGCTCGCCAAATGGGATATTATTT 59.779 41.667 2.41 0.00 40.01 1.40
2925 3018 5.163513 GCTCGCCAAATGGGATATTATTTG 58.836 41.667 0.90 11.22 41.58 2.32
2926 3019 5.278957 GCTCGCCAAATGGGATATTATTTGT 60.279 40.000 14.54 0.00 40.77 2.83
2927 3020 6.072175 GCTCGCCAAATGGGATATTATTTGTA 60.072 38.462 14.54 5.15 40.77 2.41
2928 3021 7.447374 TCGCCAAATGGGATATTATTTGTAG 57.553 36.000 14.54 10.39 40.77 2.74
2929 3022 7.227873 TCGCCAAATGGGATATTATTTGTAGA 58.772 34.615 14.54 11.69 40.77 2.59
2930 3023 7.174253 TCGCCAAATGGGATATTATTTGTAGAC 59.826 37.037 14.54 5.94 40.77 2.59
2931 3024 7.574967 CGCCAAATGGGATATTATTTGTAGACC 60.575 40.741 14.54 0.00 40.77 3.85
2932 3025 7.574967 GCCAAATGGGATATTATTTGTAGACCG 60.575 40.741 14.54 5.28 40.77 4.79
2933 3026 7.663905 CCAAATGGGATATTATTTGTAGACCGA 59.336 37.037 14.54 0.00 40.77 4.69
2934 3027 9.062524 CAAATGGGATATTATTTGTAGACCGAA 57.937 33.333 0.00 0.00 38.71 4.30
2935 3028 9.635404 AAATGGGATATTATTTGTAGACCGAAA 57.365 29.630 0.00 0.00 0.00 3.46
2936 3029 8.848474 ATGGGATATTATTTGTAGACCGAAAG 57.152 34.615 0.00 0.00 0.00 2.62
2937 3030 8.025270 TGGGATATTATTTGTAGACCGAAAGA 57.975 34.615 0.00 0.00 0.00 2.52
2938 3031 8.656806 TGGGATATTATTTGTAGACCGAAAGAT 58.343 33.333 0.00 0.00 0.00 2.40
2939 3032 9.152595 GGGATATTATTTGTAGACCGAAAGATC 57.847 37.037 0.00 0.00 0.00 2.75
2940 3033 9.706691 GGATATTATTTGTAGACCGAAAGATCA 57.293 33.333 0.00 0.00 0.00 2.92
2943 3036 7.843490 TTATTTGTAGACCGAAAGATCAAGG 57.157 36.000 0.00 0.00 0.00 3.61
2944 3037 3.887621 TGTAGACCGAAAGATCAAGGG 57.112 47.619 0.00 0.00 0.00 3.95
2945 3038 2.500098 TGTAGACCGAAAGATCAAGGGG 59.500 50.000 0.00 0.00 0.00 4.79
2946 3039 0.912486 AGACCGAAAGATCAAGGGGG 59.088 55.000 0.00 0.00 0.00 5.40
2947 3040 0.618981 GACCGAAAGATCAAGGGGGT 59.381 55.000 0.00 0.00 0.00 4.95
2948 3041 0.618981 ACCGAAAGATCAAGGGGGTC 59.381 55.000 0.00 0.00 0.00 4.46
2949 3042 0.618458 CCGAAAGATCAAGGGGGTCA 59.382 55.000 0.00 0.00 0.00 4.02
2950 3043 1.004277 CCGAAAGATCAAGGGGGTCAA 59.996 52.381 0.00 0.00 0.00 3.18
2951 3044 2.359900 CGAAAGATCAAGGGGGTCAAG 58.640 52.381 0.00 0.00 0.00 3.02
2952 3045 2.728007 GAAAGATCAAGGGGGTCAAGG 58.272 52.381 0.00 0.00 0.00 3.61
2953 3046 0.332972 AAGATCAAGGGGGTCAAGGC 59.667 55.000 0.00 0.00 0.00 4.35
2954 3047 0.846427 AGATCAAGGGGGTCAAGGCA 60.846 55.000 0.00 0.00 0.00 4.75
2955 3048 0.259938 GATCAAGGGGGTCAAGGCAT 59.740 55.000 0.00 0.00 0.00 4.40
2956 3049 0.712380 ATCAAGGGGGTCAAGGCATT 59.288 50.000 0.00 0.00 0.00 3.56
2957 3050 0.251742 TCAAGGGGGTCAAGGCATTG 60.252 55.000 4.34 4.34 37.80 2.82
2958 3051 0.251742 CAAGGGGGTCAAGGCATTGA 60.252 55.000 10.22 10.22 43.20 2.57
2959 3052 0.486879 AAGGGGGTCAAGGCATTGAA 59.513 50.000 16.43 0.00 46.75 2.69
2960 3053 0.486879 AGGGGGTCAAGGCATTGAAA 59.513 50.000 16.43 0.00 46.75 2.69
2961 3054 1.132881 AGGGGGTCAAGGCATTGAAAA 60.133 47.619 16.43 0.00 46.75 2.29
2962 3055 1.908619 GGGGGTCAAGGCATTGAAAAT 59.091 47.619 16.43 0.00 46.75 1.82
2963 3056 2.093500 GGGGGTCAAGGCATTGAAAATC 60.093 50.000 16.43 3.01 46.75 2.17
2964 3057 2.833943 GGGGTCAAGGCATTGAAAATCT 59.166 45.455 16.43 0.00 46.75 2.40
2965 3058 3.261643 GGGGTCAAGGCATTGAAAATCTT 59.738 43.478 16.43 0.00 46.75 2.40
2966 3059 4.248058 GGGTCAAGGCATTGAAAATCTTG 58.752 43.478 16.43 1.19 46.75 3.02
2967 3060 4.021192 GGGTCAAGGCATTGAAAATCTTGA 60.021 41.667 16.43 3.77 46.75 3.02
2968 3061 5.511202 GGGTCAAGGCATTGAAAATCTTGAA 60.511 40.000 16.43 0.00 46.75 2.69
2969 3062 5.636543 GGTCAAGGCATTGAAAATCTTGAAG 59.363 40.000 16.43 0.00 46.75 3.02
2970 3063 6.218746 GTCAAGGCATTGAAAATCTTGAAGT 58.781 36.000 16.43 0.00 46.75 3.01
2971 3064 6.364435 GTCAAGGCATTGAAAATCTTGAAGTC 59.636 38.462 16.43 0.00 46.75 3.01
2972 3065 6.040729 TCAAGGCATTGAAAATCTTGAAGTCA 59.959 34.615 12.07 0.00 42.47 3.41
2973 3066 6.409524 AGGCATTGAAAATCTTGAAGTCAA 57.590 33.333 0.00 0.00 33.08 3.18
2974 3067 7.095774 CAAGGCATTGAAAATCTTGAAGTCAAG 60.096 37.037 4.81 13.80 45.03 3.02
2987 3080 6.851222 TTGAAGTCAAGAACAGATGTCTTC 57.149 37.500 6.02 6.02 40.09 2.87
2988 3081 5.917462 TGAAGTCAAGAACAGATGTCTTCA 58.083 37.500 10.05 10.05 43.97 3.02
2989 3082 5.755375 TGAAGTCAAGAACAGATGTCTTCAC 59.245 40.000 10.05 1.69 42.52 3.18
2990 3083 5.282055 AGTCAAGAACAGATGTCTTCACA 57.718 39.130 0.00 0.00 36.78 3.58
2991 3084 5.295950 AGTCAAGAACAGATGTCTTCACAG 58.704 41.667 0.00 0.00 35.41 3.66
2992 3085 5.053145 GTCAAGAACAGATGTCTTCACAGT 58.947 41.667 0.00 0.00 35.41 3.55
2993 3086 6.040955 AGTCAAGAACAGATGTCTTCACAGTA 59.959 38.462 0.00 0.00 35.41 2.74
2994 3087 6.701841 GTCAAGAACAGATGTCTTCACAGTAA 59.298 38.462 0.00 0.00 35.41 2.24
2995 3088 6.925718 TCAAGAACAGATGTCTTCACAGTAAG 59.074 38.462 0.00 0.00 35.41 2.34
2996 3089 6.412362 AGAACAGATGTCTTCACAGTAAGT 57.588 37.500 0.00 0.00 35.41 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 39 3.866327 GGTGAAAGCTTTCCTCTATCGTC 59.134 47.826 31.14 8.43 36.36 4.20
47 49 3.364068 GCAACGTCTAGGTGAAAGCTTTC 60.364 47.826 28.61 28.61 46.63 2.62
178 192 5.042463 TGGATGTAGGAAAAACACAGACA 57.958 39.130 0.00 0.00 0.00 3.41
257 271 6.454795 ACGAGGATATTGCAACAAAAATGTT 58.545 32.000 0.00 0.00 0.00 2.71
339 353 1.821216 AAAAATCCATCGGCGTCACT 58.179 45.000 6.85 0.00 0.00 3.41
461 478 2.235650 CTCATCGGAGTGCCATGGATAT 59.764 50.000 18.40 0.00 36.36 1.63
462 479 1.620323 CTCATCGGAGTGCCATGGATA 59.380 52.381 18.40 0.00 36.36 2.59
706 723 4.632974 GGCCGCCCCATGCTCTAG 62.633 72.222 0.00 0.00 38.05 2.43
750 767 1.699634 CCTTGTCCTTGTCTCCCTGAA 59.300 52.381 0.00 0.00 0.00 3.02
794 818 3.227372 CTGCTGTGCAACACCGTCG 62.227 63.158 0.00 0.00 45.67 5.12
822 846 4.767255 CAGCCGGTCTGCTCCCAC 62.767 72.222 12.01 0.00 40.32 4.61
838 862 2.622011 GCACCGGCCGAATGTTTCA 61.622 57.895 30.73 0.00 0.00 2.69
878 903 9.800433 CTCTATTTGGATGCAGAGTATATGTAG 57.200 37.037 0.00 0.00 31.77 2.74
889 914 4.965814 TCTTAGGCTCTATTTGGATGCAG 58.034 43.478 0.00 0.00 0.00 4.41
900 925 5.535406 CGGAAACCTTATCTCTTAGGCTCTA 59.465 44.000 0.00 0.00 34.79 2.43
986 1011 2.334946 GCCATTTGGAGTCTGCGCA 61.335 57.895 10.98 10.98 37.39 6.09
1007 1032 1.078426 GTGTTGATACCGCCCAGCT 60.078 57.895 0.00 0.00 0.00 4.24
1494 1519 1.313091 CCTGACCAGTCGTCCGATCA 61.313 60.000 0.00 0.00 41.18 2.92
1626 1651 9.170734 ACTCTGATCACACGTATAAACTACTAA 57.829 33.333 0.00 0.00 0.00 2.24
1627 1652 8.728337 ACTCTGATCACACGTATAAACTACTA 57.272 34.615 0.00 0.00 0.00 1.82
1628 1653 7.627298 ACTCTGATCACACGTATAAACTACT 57.373 36.000 0.00 0.00 0.00 2.57
1629 1654 9.947669 AATACTCTGATCACACGTATAAACTAC 57.052 33.333 0.00 0.00 0.00 2.73
1631 1656 9.302345 CAAATACTCTGATCACACGTATAAACT 57.698 33.333 0.00 0.00 0.00 2.66
1632 1657 8.540492 CCAAATACTCTGATCACACGTATAAAC 58.460 37.037 0.00 0.00 0.00 2.01
1634 1659 7.919091 GTCCAAATACTCTGATCACACGTATAA 59.081 37.037 0.00 0.00 0.00 0.98
1635 1660 7.423199 GTCCAAATACTCTGATCACACGTATA 58.577 38.462 0.00 0.00 0.00 1.47
1636 1661 6.273825 GTCCAAATACTCTGATCACACGTAT 58.726 40.000 0.00 0.00 0.00 3.06
1637 1662 5.393787 GGTCCAAATACTCTGATCACACGTA 60.394 44.000 0.00 0.00 0.00 3.57
1638 1663 4.495422 GTCCAAATACTCTGATCACACGT 58.505 43.478 0.00 0.00 0.00 4.49
1640 1667 4.832248 TGGTCCAAATACTCTGATCACAC 58.168 43.478 0.00 0.00 0.00 3.82
1650 1677 4.729868 AGCAAGAACTTGGTCCAAATACT 58.270 39.130 12.51 2.38 47.00 2.12
1676 1707 9.642327 TGATCATTTTCTGTGACCATTTAAATG 57.358 29.630 19.40 19.40 34.49 2.32
1848 1879 0.447801 CCAATCTTTCGCCAGTTCCG 59.552 55.000 0.00 0.00 0.00 4.30
1872 1903 1.523258 CAGCTTGCATCTCCCTCCG 60.523 63.158 0.00 0.00 0.00 4.63
1923 1954 5.497464 TGAGGAAGGTGTTCATGAATACA 57.503 39.130 29.28 15.44 34.62 2.29
1980 2011 1.748403 GCTGGCGATGGAGATGGTA 59.252 57.895 0.00 0.00 0.00 3.25
2002 2033 1.278985 ACGAAACAGGCATGATCAGGA 59.721 47.619 12.39 0.00 0.00 3.86
2010 2041 1.346395 TGTAGACCACGAAACAGGCAT 59.654 47.619 0.00 0.00 0.00 4.40
2143 2174 4.023878 GCAAAATGTGTTCCCGTTACTACA 60.024 41.667 0.00 0.00 0.00 2.74
2146 2177 2.952978 TGCAAAATGTGTTCCCGTTACT 59.047 40.909 0.00 0.00 0.00 2.24
2175 2209 3.998913 AAAAATATTTGGCCCCTGTGG 57.001 42.857 0.00 0.00 37.09 4.17
2212 2298 5.796502 AAAAAGGACCTGAGGGAATATGA 57.203 39.130 2.38 0.00 36.25 2.15
2213 2299 6.663734 ACTAAAAAGGACCTGAGGGAATATG 58.336 40.000 2.38 0.00 36.25 1.78
2214 2300 6.910259 ACTAAAAAGGACCTGAGGGAATAT 57.090 37.500 2.38 0.00 36.25 1.28
2217 2303 4.504340 CGAACTAAAAAGGACCTGAGGGAA 60.504 45.833 2.38 0.00 36.25 3.97
2218 2304 3.007614 CGAACTAAAAAGGACCTGAGGGA 59.992 47.826 2.38 0.00 36.25 4.20
2219 2305 3.335579 CGAACTAAAAAGGACCTGAGGG 58.664 50.000 2.38 0.00 38.88 4.30
2220 2306 2.742589 GCGAACTAAAAAGGACCTGAGG 59.257 50.000 0.00 0.00 0.00 3.86
2221 2307 3.399330 TGCGAACTAAAAAGGACCTGAG 58.601 45.455 0.00 0.00 0.00 3.35
2222 2308 3.478857 TGCGAACTAAAAAGGACCTGA 57.521 42.857 0.00 0.00 0.00 3.86
2223 2309 7.494625 TCTTATATGCGAACTAAAAAGGACCTG 59.505 37.037 0.00 0.00 0.00 4.00
2224 2310 7.562135 TCTTATATGCGAACTAAAAAGGACCT 58.438 34.615 0.00 0.00 0.00 3.85
2225 2311 7.781548 TCTTATATGCGAACTAAAAAGGACC 57.218 36.000 0.00 0.00 0.00 4.46
2232 2318 9.594478 TGAGTCAAATCTTATATGCGAACTAAA 57.406 29.630 0.00 0.00 0.00 1.85
2233 2319 9.594478 TTGAGTCAAATCTTATATGCGAACTAA 57.406 29.630 2.20 0.00 0.00 2.24
2234 2320 9.249457 CTTGAGTCAAATCTTATATGCGAACTA 57.751 33.333 7.06 0.00 0.00 2.24
2235 2321 7.766278 ACTTGAGTCAAATCTTATATGCGAACT 59.234 33.333 7.06 0.00 0.00 3.01
2236 2322 7.910304 ACTTGAGTCAAATCTTATATGCGAAC 58.090 34.615 7.06 0.00 0.00 3.95
2237 2323 8.131455 GACTTGAGTCAAATCTTATATGCGAA 57.869 34.615 7.07 0.00 44.18 4.70
2238 2324 7.700322 GACTTGAGTCAAATCTTATATGCGA 57.300 36.000 7.07 0.00 44.18 5.10
2253 2339 7.541122 AACTTTACAAGACTTGACTTGAGTC 57.459 36.000 21.95 4.20 46.85 3.36
2254 2340 7.606456 TCAAACTTTACAAGACTTGACTTGAGT 59.394 33.333 21.95 13.38 46.85 3.41
2255 2341 7.905493 GTCAAACTTTACAAGACTTGACTTGAG 59.095 37.037 21.95 12.84 46.85 3.02
2256 2342 7.148306 GGTCAAACTTTACAAGACTTGACTTGA 60.148 37.037 21.95 14.99 46.85 3.02
2258 2344 6.657541 TGGTCAAACTTTACAAGACTTGACTT 59.342 34.615 21.95 2.11 44.62 3.01
2259 2345 6.177610 TGGTCAAACTTTACAAGACTTGACT 58.822 36.000 21.95 2.86 44.62 3.41
2260 2346 6.431198 TGGTCAAACTTTACAAGACTTGAC 57.569 37.500 21.95 18.14 44.56 3.18
2261 2347 6.848451 GTTGGTCAAACTTTACAAGACTTGA 58.152 36.000 21.95 2.90 35.75 3.02
2295 2381 9.829507 TTTCAGATTGTGGATGTTTGTATTTTT 57.170 25.926 0.00 0.00 0.00 1.94
2297 2383 9.643693 GATTTCAGATTGTGGATGTTTGTATTT 57.356 29.630 0.00 0.00 0.00 1.40
2298 2384 8.805175 TGATTTCAGATTGTGGATGTTTGTATT 58.195 29.630 0.00 0.00 0.00 1.89
2299 2385 8.352137 TGATTTCAGATTGTGGATGTTTGTAT 57.648 30.769 0.00 0.00 0.00 2.29
2300 2386 7.757941 TGATTTCAGATTGTGGATGTTTGTA 57.242 32.000 0.00 0.00 0.00 2.41
2301 2387 6.653526 TGATTTCAGATTGTGGATGTTTGT 57.346 33.333 0.00 0.00 0.00 2.83
2302 2388 9.811995 ATATTGATTTCAGATTGTGGATGTTTG 57.188 29.630 0.00 0.00 0.00 2.93
2304 2390 9.192642 TGATATTGATTTCAGATTGTGGATGTT 57.807 29.630 0.00 0.00 0.00 2.71
2305 2391 8.756486 TGATATTGATTTCAGATTGTGGATGT 57.244 30.769 0.00 0.00 0.00 3.06
2354 2440 9.348476 TGCCATGCTAAAGTTATACAATATGAA 57.652 29.630 0.00 0.00 0.00 2.57
2355 2441 8.916628 TGCCATGCTAAAGTTATACAATATGA 57.083 30.769 0.00 0.00 0.00 2.15
2356 2442 9.002600 TCTGCCATGCTAAAGTTATACAATATG 57.997 33.333 0.00 0.00 0.00 1.78
2357 2443 9.745018 ATCTGCCATGCTAAAGTTATACAATAT 57.255 29.630 0.00 0.00 0.00 1.28
2358 2444 9.002600 CATCTGCCATGCTAAAGTTATACAATA 57.997 33.333 0.00 0.00 0.00 1.90
2359 2445 7.503566 ACATCTGCCATGCTAAAGTTATACAAT 59.496 33.333 0.00 0.00 0.00 2.71
2360 2446 6.828273 ACATCTGCCATGCTAAAGTTATACAA 59.172 34.615 0.00 0.00 0.00 2.41
2361 2447 6.356556 ACATCTGCCATGCTAAAGTTATACA 58.643 36.000 0.00 0.00 0.00 2.29
2362 2448 6.867662 ACATCTGCCATGCTAAAGTTATAC 57.132 37.500 0.00 0.00 0.00 1.47
2363 2449 7.053498 TCAACATCTGCCATGCTAAAGTTATA 58.947 34.615 0.00 0.00 0.00 0.98
2364 2450 5.887598 TCAACATCTGCCATGCTAAAGTTAT 59.112 36.000 0.00 0.00 0.00 1.89
2365 2451 5.252547 TCAACATCTGCCATGCTAAAGTTA 58.747 37.500 0.00 0.00 0.00 2.24
2366 2452 4.081406 TCAACATCTGCCATGCTAAAGTT 58.919 39.130 0.00 0.00 0.00 2.66
2367 2453 3.689347 TCAACATCTGCCATGCTAAAGT 58.311 40.909 0.00 0.00 0.00 2.66
2368 2454 4.913335 ATCAACATCTGCCATGCTAAAG 57.087 40.909 0.00 0.00 0.00 1.85
2369 2455 6.964807 AATATCAACATCTGCCATGCTAAA 57.035 33.333 0.00 0.00 0.00 1.85
2370 2456 6.964807 AAATATCAACATCTGCCATGCTAA 57.035 33.333 0.00 0.00 0.00 3.09
2371 2457 6.964807 AAAATATCAACATCTGCCATGCTA 57.035 33.333 0.00 0.00 0.00 3.49
2372 2458 5.864418 AAAATATCAACATCTGCCATGCT 57.136 34.783 0.00 0.00 0.00 3.79
2396 2482 9.438228 TCACAAAGTTTGACCGTATTTATATGA 57.562 29.630 22.23 7.49 0.00 2.15
2399 2485 9.275398 ACTTCACAAAGTTTGACCGTATTTATA 57.725 29.630 22.23 0.00 43.28 0.98
2400 2486 8.161699 ACTTCACAAAGTTTGACCGTATTTAT 57.838 30.769 22.23 0.00 43.28 1.40
2401 2487 7.556733 ACTTCACAAAGTTTGACCGTATTTA 57.443 32.000 22.23 0.00 43.28 1.40
2402 2488 6.445357 ACTTCACAAAGTTTGACCGTATTT 57.555 33.333 22.23 0.00 43.28 1.40
2424 2510 9.928236 GCATATTAGAATTCTCTGAAGTCAAAC 57.072 33.333 12.24 0.00 32.70 2.93
2425 2511 9.671279 TGCATATTAGAATTCTCTGAAGTCAAA 57.329 29.630 12.24 0.00 32.70 2.69
2426 2512 9.322773 CTGCATATTAGAATTCTCTGAAGTCAA 57.677 33.333 12.24 0.00 32.70 3.18
2427 2513 8.699130 TCTGCATATTAGAATTCTCTGAAGTCA 58.301 33.333 12.24 3.02 32.70 3.41
2428 2514 9.195411 CTCTGCATATTAGAATTCTCTGAAGTC 57.805 37.037 12.24 0.25 32.70 3.01
2429 2515 8.703743 ACTCTGCATATTAGAATTCTCTGAAGT 58.296 33.333 12.24 7.56 32.70 3.01
2439 2525 9.343539 GGTCCTTTTTACTCTGCATATTAGAAT 57.656 33.333 0.00 0.00 0.00 2.40
2440 2526 7.494625 CGGTCCTTTTTACTCTGCATATTAGAA 59.505 37.037 0.00 0.00 0.00 2.10
2441 2527 6.984474 CGGTCCTTTTTACTCTGCATATTAGA 59.016 38.462 0.00 0.00 0.00 2.10
2442 2528 6.202954 CCGGTCCTTTTTACTCTGCATATTAG 59.797 42.308 0.00 0.00 0.00 1.73
2443 2529 6.053005 CCGGTCCTTTTTACTCTGCATATTA 58.947 40.000 0.00 0.00 0.00 0.98
2444 2530 4.881850 CCGGTCCTTTTTACTCTGCATATT 59.118 41.667 0.00 0.00 0.00 1.28
2445 2531 4.451900 CCGGTCCTTTTTACTCTGCATAT 58.548 43.478 0.00 0.00 0.00 1.78
2446 2532 3.370103 CCCGGTCCTTTTTACTCTGCATA 60.370 47.826 0.00 0.00 0.00 3.14
2447 2533 2.618045 CCCGGTCCTTTTTACTCTGCAT 60.618 50.000 0.00 0.00 0.00 3.96
2448 2534 1.271163 CCCGGTCCTTTTTACTCTGCA 60.271 52.381 0.00 0.00 0.00 4.41
2449 2535 1.450025 CCCGGTCCTTTTTACTCTGC 58.550 55.000 0.00 0.00 0.00 4.26
2450 2536 1.339727 CCCCCGGTCCTTTTTACTCTG 60.340 57.143 0.00 0.00 0.00 3.35
2451 2537 0.989602 CCCCCGGTCCTTTTTACTCT 59.010 55.000 0.00 0.00 0.00 3.24
2452 2538 3.564262 CCCCCGGTCCTTTTTACTC 57.436 57.895 0.00 0.00 0.00 2.59
2473 2559 7.970061 TGCTTTGCATCAAGATTTATCTTGTAC 59.030 33.333 24.30 17.38 46.84 2.90
2474 2560 8.054152 TGCTTTGCATCAAGATTTATCTTGTA 57.946 30.769 24.30 15.30 46.84 2.41
2475 2561 6.927416 TGCTTTGCATCAAGATTTATCTTGT 58.073 32.000 24.30 13.68 46.84 3.16
2478 2564 9.745880 CTATTTGCTTTGCATCAAGATTTATCT 57.254 29.630 2.23 0.00 38.76 1.98
2509 2595 7.168637 TCGTCGTAACCAAAGCATAATCTTATC 59.831 37.037 0.00 0.00 0.00 1.75
2521 2607 5.640218 TTTGTACTTCGTCGTAACCAAAG 57.360 39.130 0.00 0.00 0.00 2.77
2531 2617 6.806120 AAGTTGCAAAATTTGTACTTCGTC 57.194 33.333 16.70 0.00 34.73 4.20
2533 2619 8.379902 AGAAAAAGTTGCAAAATTTGTACTTCG 58.620 29.630 20.18 0.00 44.05 3.79
2576 2669 6.649141 GCGGATTAATCATTGACACATACCTA 59.351 38.462 17.07 0.00 0.00 3.08
2586 2679 5.939883 CCCAATAGAGCGGATTAATCATTGA 59.060 40.000 17.07 0.00 0.00 2.57
2638 2731 5.841957 TTAGAAACGGAGAGGGTACATAC 57.158 43.478 0.00 0.00 0.00 2.39
2645 2738 7.953752 AGACTTATATTTAGAAACGGAGAGGG 58.046 38.462 0.00 0.00 0.00 4.30
2646 2739 9.819267 AAAGACTTATATTTAGAAACGGAGAGG 57.181 33.333 0.00 0.00 0.00 3.69
2665 2758 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
2666 2759 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
2671 2764 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
2672 2765 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
2673 2766 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
2674 2767 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
2675 2768 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
2676 2769 8.511321 TGTATGTTGTAGTCCATTTGAAATGTC 58.489 33.333 15.93 9.10 0.00 3.06
2677 2770 8.402798 TGTATGTTGTAGTCCATTTGAAATGT 57.597 30.769 15.93 1.43 0.00 2.71
2678 2771 9.689976 TTTGTATGTTGTAGTCCATTTGAAATG 57.310 29.630 10.84 10.84 0.00 2.32
2680 2773 9.689976 CATTTGTATGTTGTAGTCCATTTGAAA 57.310 29.630 0.00 0.00 0.00 2.69
2681 2774 8.855110 ACATTTGTATGTTGTAGTCCATTTGAA 58.145 29.630 0.00 0.00 42.29 2.69
2682 2775 8.402798 ACATTTGTATGTTGTAGTCCATTTGA 57.597 30.769 0.00 0.00 42.29 2.69
2726 2819 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2727 2820 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2728 2821 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2729 2822 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2730 2823 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2731 2824 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2732 2825 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2733 2826 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2734 2827 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2735 2828 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2736 2829 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2737 2830 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2738 2831 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2739 2832 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2740 2833 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2741 2834 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2742 2835 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2743 2836 3.845178 CAAGTGACTACATACGGAGCAA 58.155 45.455 0.00 0.00 0.00 3.91
2744 2837 2.416836 GCAAGTGACTACATACGGAGCA 60.417 50.000 0.00 0.00 0.00 4.26
2745 2838 2.159226 AGCAAGTGACTACATACGGAGC 60.159 50.000 0.00 0.00 0.00 4.70
2746 2839 3.784701 AGCAAGTGACTACATACGGAG 57.215 47.619 0.00 0.00 0.00 4.63
2747 2840 5.847111 ATAAGCAAGTGACTACATACGGA 57.153 39.130 0.00 0.00 0.00 4.69
2748 2841 7.997107 TTAATAAGCAAGTGACTACATACGG 57.003 36.000 0.00 0.00 0.00 4.02
2752 2845 9.243105 ACCAAATTAATAAGCAAGTGACTACAT 57.757 29.630 0.00 0.00 0.00 2.29
2753 2846 8.630054 ACCAAATTAATAAGCAAGTGACTACA 57.370 30.769 0.00 0.00 0.00 2.74
2754 2847 9.556030 GAACCAAATTAATAAGCAAGTGACTAC 57.444 33.333 0.00 0.00 0.00 2.73
2755 2848 9.515226 AGAACCAAATTAATAAGCAAGTGACTA 57.485 29.630 0.00 0.00 0.00 2.59
2756 2849 8.409358 AGAACCAAATTAATAAGCAAGTGACT 57.591 30.769 0.00 0.00 0.00 3.41
2757 2850 8.296713 TGAGAACCAAATTAATAAGCAAGTGAC 58.703 33.333 0.00 0.00 0.00 3.67
2758 2851 8.296713 GTGAGAACCAAATTAATAAGCAAGTGA 58.703 33.333 0.00 0.00 0.00 3.41
2759 2852 7.271223 CGTGAGAACCAAATTAATAAGCAAGTG 59.729 37.037 0.00 0.00 0.00 3.16
2760 2853 7.174253 TCGTGAGAACCAAATTAATAAGCAAGT 59.826 33.333 0.00 0.00 37.03 3.16
2761 2854 7.526608 TCGTGAGAACCAAATTAATAAGCAAG 58.473 34.615 0.00 0.00 37.03 4.01
2762 2855 7.174253 ACTCGTGAGAACCAAATTAATAAGCAA 59.826 33.333 3.44 0.00 41.32 3.91
2763 2856 6.653320 ACTCGTGAGAACCAAATTAATAAGCA 59.347 34.615 3.44 0.00 41.32 3.91
2764 2857 7.073342 ACTCGTGAGAACCAAATTAATAAGC 57.927 36.000 3.44 0.00 41.32 3.09
2766 2859 8.609176 GCATACTCGTGAGAACCAAATTAATAA 58.391 33.333 3.44 0.00 41.32 1.40
2767 2860 7.225931 GGCATACTCGTGAGAACCAAATTAATA 59.774 37.037 3.44 0.00 41.32 0.98
2768 2861 6.038271 GGCATACTCGTGAGAACCAAATTAAT 59.962 38.462 3.44 0.00 41.32 1.40
2769 2862 5.353123 GGCATACTCGTGAGAACCAAATTAA 59.647 40.000 3.44 0.00 41.32 1.40
2770 2863 4.873827 GGCATACTCGTGAGAACCAAATTA 59.126 41.667 3.44 0.00 41.32 1.40
2771 2864 3.689649 GGCATACTCGTGAGAACCAAATT 59.310 43.478 3.44 0.00 41.32 1.82
2772 2865 3.270877 GGCATACTCGTGAGAACCAAAT 58.729 45.455 3.44 0.00 41.32 2.32
2773 2866 2.037902 TGGCATACTCGTGAGAACCAAA 59.962 45.455 3.44 0.00 41.32 3.28
2774 2867 1.621317 TGGCATACTCGTGAGAACCAA 59.379 47.619 3.44 0.00 41.32 3.67
2775 2868 1.262417 TGGCATACTCGTGAGAACCA 58.738 50.000 3.44 2.83 41.32 3.67
2776 2869 2.380084 TTGGCATACTCGTGAGAACC 57.620 50.000 3.44 0.30 41.32 3.62
2777 2870 3.262420 ACATTGGCATACTCGTGAGAAC 58.738 45.455 3.44 0.00 41.32 3.01
2778 2871 3.610040 ACATTGGCATACTCGTGAGAA 57.390 42.857 3.44 0.00 41.32 2.87
2779 2872 3.610040 AACATTGGCATACTCGTGAGA 57.390 42.857 3.44 0.00 39.12 3.27
2780 2873 3.935203 AGAAACATTGGCATACTCGTGAG 59.065 43.478 0.00 0.00 0.00 3.51
2781 2874 3.932710 GAGAAACATTGGCATACTCGTGA 59.067 43.478 0.00 0.00 0.00 4.35
2782 2875 3.935203 AGAGAAACATTGGCATACTCGTG 59.065 43.478 0.00 0.00 0.00 4.35
2783 2876 4.207891 AGAGAAACATTGGCATACTCGT 57.792 40.909 0.00 0.00 0.00 4.18
2784 2877 4.393062 ACAAGAGAAACATTGGCATACTCG 59.607 41.667 0.00 0.00 0.00 4.18
2785 2878 5.163713 GGACAAGAGAAACATTGGCATACTC 60.164 44.000 0.00 0.00 36.07 2.59
2786 2879 4.702131 GGACAAGAGAAACATTGGCATACT 59.298 41.667 0.00 0.00 36.07 2.12
2787 2880 4.702131 AGGACAAGAGAAACATTGGCATAC 59.298 41.667 0.00 0.00 36.07 2.39
2788 2881 4.922206 AGGACAAGAGAAACATTGGCATA 58.078 39.130 0.00 0.00 36.07 3.14
2789 2882 3.771216 AGGACAAGAGAAACATTGGCAT 58.229 40.909 0.00 0.00 36.07 4.40
2790 2883 3.228188 AGGACAAGAGAAACATTGGCA 57.772 42.857 0.00 0.00 36.07 4.92
2791 2884 4.590850 AAAGGACAAGAGAAACATTGGC 57.409 40.909 0.00 0.00 33.45 4.52
2792 2885 5.687285 CGAAAAAGGACAAGAGAAACATTGG 59.313 40.000 0.00 0.00 0.00 3.16
2793 2886 6.494842 TCGAAAAAGGACAAGAGAAACATTG 58.505 36.000 0.00 0.00 0.00 2.82
2794 2887 6.542370 TCTCGAAAAAGGACAAGAGAAACATT 59.458 34.615 0.00 0.00 32.59 2.71
2795 2888 6.055588 TCTCGAAAAAGGACAAGAGAAACAT 58.944 36.000 0.00 0.00 32.59 2.71
2796 2889 5.424757 TCTCGAAAAAGGACAAGAGAAACA 58.575 37.500 0.00 0.00 32.59 2.83
2797 2890 5.986004 TCTCGAAAAAGGACAAGAGAAAC 57.014 39.130 0.00 0.00 32.59 2.78
2798 2891 6.204882 GGAATCTCGAAAAAGGACAAGAGAAA 59.795 38.462 0.00 0.00 38.11 2.52
2799 2892 5.701290 GGAATCTCGAAAAAGGACAAGAGAA 59.299 40.000 0.00 0.00 38.11 2.87
2800 2893 5.221641 TGGAATCTCGAAAAAGGACAAGAGA 60.222 40.000 0.00 0.00 38.81 3.10
2801 2894 4.997395 TGGAATCTCGAAAAAGGACAAGAG 59.003 41.667 0.00 0.00 0.00 2.85
2802 2895 4.968259 TGGAATCTCGAAAAAGGACAAGA 58.032 39.130 0.00 0.00 0.00 3.02
2803 2896 4.757149 ACTGGAATCTCGAAAAAGGACAAG 59.243 41.667 0.00 0.00 0.00 3.16
2804 2897 4.714632 ACTGGAATCTCGAAAAAGGACAA 58.285 39.130 0.00 0.00 0.00 3.18
2805 2898 4.351874 ACTGGAATCTCGAAAAAGGACA 57.648 40.909 0.00 0.00 0.00 4.02
2806 2899 6.164176 TCTAACTGGAATCTCGAAAAAGGAC 58.836 40.000 0.00 0.00 0.00 3.85
2807 2900 6.014499 ACTCTAACTGGAATCTCGAAAAAGGA 60.014 38.462 0.00 0.00 0.00 3.36
2808 2901 6.166982 ACTCTAACTGGAATCTCGAAAAAGG 58.833 40.000 0.00 0.00 0.00 3.11
2809 2902 7.659652 AACTCTAACTGGAATCTCGAAAAAG 57.340 36.000 0.00 0.00 0.00 2.27
2810 2903 7.817962 CCTAACTCTAACTGGAATCTCGAAAAA 59.182 37.037 0.00 0.00 0.00 1.94
2811 2904 7.177921 TCCTAACTCTAACTGGAATCTCGAAAA 59.822 37.037 0.00 0.00 0.00 2.29
2812 2905 6.662234 TCCTAACTCTAACTGGAATCTCGAAA 59.338 38.462 0.00 0.00 0.00 3.46
2813 2906 6.185511 TCCTAACTCTAACTGGAATCTCGAA 58.814 40.000 0.00 0.00 0.00 3.71
2814 2907 5.752650 TCCTAACTCTAACTGGAATCTCGA 58.247 41.667 0.00 0.00 0.00 4.04
2815 2908 6.452494 TTCCTAACTCTAACTGGAATCTCG 57.548 41.667 0.00 0.00 32.57 4.04
2816 2909 7.766738 CCTTTTCCTAACTCTAACTGGAATCTC 59.233 40.741 0.00 0.00 36.78 2.75
2817 2910 7.625469 CCTTTTCCTAACTCTAACTGGAATCT 58.375 38.462 0.00 0.00 36.78 2.40
2818 2911 6.316640 GCCTTTTCCTAACTCTAACTGGAATC 59.683 42.308 0.00 0.00 36.78 2.52
2819 2912 6.012421 AGCCTTTTCCTAACTCTAACTGGAAT 60.012 38.462 0.00 0.00 36.78 3.01
2820 2913 5.309806 AGCCTTTTCCTAACTCTAACTGGAA 59.690 40.000 0.00 0.00 35.31 3.53
2821 2914 4.844655 AGCCTTTTCCTAACTCTAACTGGA 59.155 41.667 0.00 0.00 0.00 3.86
2822 2915 4.938226 CAGCCTTTTCCTAACTCTAACTGG 59.062 45.833 0.00 0.00 0.00 4.00
2823 2916 4.938226 CCAGCCTTTTCCTAACTCTAACTG 59.062 45.833 0.00 0.00 0.00 3.16
2824 2917 4.844655 TCCAGCCTTTTCCTAACTCTAACT 59.155 41.667 0.00 0.00 0.00 2.24
2825 2918 4.936411 GTCCAGCCTTTTCCTAACTCTAAC 59.064 45.833 0.00 0.00 0.00 2.34
2826 2919 4.844655 AGTCCAGCCTTTTCCTAACTCTAA 59.155 41.667 0.00 0.00 0.00 2.10
2827 2920 4.426704 AGTCCAGCCTTTTCCTAACTCTA 58.573 43.478 0.00 0.00 0.00 2.43
2828 2921 3.252351 AGTCCAGCCTTTTCCTAACTCT 58.748 45.455 0.00 0.00 0.00 3.24
2829 2922 3.704800 AGTCCAGCCTTTTCCTAACTC 57.295 47.619 0.00 0.00 0.00 3.01
2830 2923 3.653352 AGAAGTCCAGCCTTTTCCTAACT 59.347 43.478 0.00 0.00 0.00 2.24
2831 2924 4.022413 AGAAGTCCAGCCTTTTCCTAAC 57.978 45.455 0.00 0.00 0.00 2.34
2832 2925 5.395324 CGATAGAAGTCCAGCCTTTTCCTAA 60.395 44.000 0.00 0.00 39.76 2.69
2833 2926 4.099573 CGATAGAAGTCCAGCCTTTTCCTA 59.900 45.833 0.00 0.00 39.76 2.94
2834 2927 3.118592 CGATAGAAGTCCAGCCTTTTCCT 60.119 47.826 0.00 0.00 39.76 3.36
2835 2928 3.118738 TCGATAGAAGTCCAGCCTTTTCC 60.119 47.826 0.00 0.00 46.15 3.13
2836 2929 4.124851 TCGATAGAAGTCCAGCCTTTTC 57.875 45.455 0.00 0.00 46.15 2.29
2862 2955 2.159043 TCATCACTCTGCCCGAAGAATC 60.159 50.000 0.00 0.00 0.00 2.52
2863 2956 1.833630 TCATCACTCTGCCCGAAGAAT 59.166 47.619 0.00 0.00 0.00 2.40
2864 2957 1.266178 TCATCACTCTGCCCGAAGAA 58.734 50.000 0.00 0.00 0.00 2.52
2865 2958 1.066858 GTTCATCACTCTGCCCGAAGA 60.067 52.381 0.00 0.00 0.00 2.87
2866 2959 1.066573 AGTTCATCACTCTGCCCGAAG 60.067 52.381 0.00 0.00 0.00 3.79
2867 2960 0.976641 AGTTCATCACTCTGCCCGAA 59.023 50.000 0.00 0.00 0.00 4.30
2868 2961 1.847328 TAGTTCATCACTCTGCCCGA 58.153 50.000 0.00 0.00 36.88 5.14
2869 2962 2.672961 TTAGTTCATCACTCTGCCCG 57.327 50.000 0.00 0.00 36.88 6.13
2870 2963 2.680339 GCTTTAGTTCATCACTCTGCCC 59.320 50.000 0.00 0.00 36.88 5.36
2871 2964 2.349886 CGCTTTAGTTCATCACTCTGCC 59.650 50.000 0.00 0.00 36.88 4.85
2872 2965 3.254060 TCGCTTTAGTTCATCACTCTGC 58.746 45.455 0.00 0.00 36.88 4.26
2873 2966 5.845985 TTTCGCTTTAGTTCATCACTCTG 57.154 39.130 0.00 0.00 36.88 3.35
2874 2967 7.602644 TGTATTTTCGCTTTAGTTCATCACTCT 59.397 33.333 0.00 0.00 36.88 3.24
2875 2968 7.739295 TGTATTTTCGCTTTAGTTCATCACTC 58.261 34.615 0.00 0.00 36.88 3.51
2876 2969 7.148407 CCTGTATTTTCGCTTTAGTTCATCACT 60.148 37.037 0.00 0.00 39.87 3.41
2877 2970 6.961554 CCTGTATTTTCGCTTTAGTTCATCAC 59.038 38.462 0.00 0.00 0.00 3.06
2878 2971 6.403200 GCCTGTATTTTCGCTTTAGTTCATCA 60.403 38.462 0.00 0.00 0.00 3.07
2879 2972 5.965918 GCCTGTATTTTCGCTTTAGTTCATC 59.034 40.000 0.00 0.00 0.00 2.92
2880 2973 5.648092 AGCCTGTATTTTCGCTTTAGTTCAT 59.352 36.000 0.00 0.00 0.00 2.57
2881 2974 5.001232 AGCCTGTATTTTCGCTTTAGTTCA 58.999 37.500 0.00 0.00 0.00 3.18
2882 2975 5.547181 AGCCTGTATTTTCGCTTTAGTTC 57.453 39.130 0.00 0.00 0.00 3.01
2883 2976 4.092968 CGAGCCTGTATTTTCGCTTTAGTT 59.907 41.667 0.00 0.00 0.00 2.24
2884 2977 3.617263 CGAGCCTGTATTTTCGCTTTAGT 59.383 43.478 0.00 0.00 0.00 2.24
2885 2978 4.183539 CGAGCCTGTATTTTCGCTTTAG 57.816 45.455 0.00 0.00 0.00 1.85
2891 2984 1.083489 TTGGCGAGCCTGTATTTTCG 58.917 50.000 15.75 0.00 36.94 3.46
2892 2985 3.438360 CATTTGGCGAGCCTGTATTTTC 58.562 45.455 15.75 0.00 36.94 2.29
2893 2986 2.166254 CCATTTGGCGAGCCTGTATTTT 59.834 45.455 15.75 0.00 36.94 1.82
2894 2987 1.750778 CCATTTGGCGAGCCTGTATTT 59.249 47.619 15.75 0.00 36.94 1.40
2895 2988 1.392589 CCATTTGGCGAGCCTGTATT 58.607 50.000 15.75 0.00 36.94 1.89
2896 2989 0.466189 CCCATTTGGCGAGCCTGTAT 60.466 55.000 15.75 3.35 36.94 2.29
2897 2990 1.077787 CCCATTTGGCGAGCCTGTA 60.078 57.895 15.75 1.00 36.94 2.74
2898 2991 2.215451 ATCCCATTTGGCGAGCCTGT 62.215 55.000 15.75 0.00 36.94 4.00
2899 2992 0.179020 TATCCCATTTGGCGAGCCTG 60.179 55.000 15.75 5.32 36.94 4.85
2900 2993 0.773644 ATATCCCATTTGGCGAGCCT 59.226 50.000 15.75 0.00 36.94 4.58
2901 2994 1.620822 AATATCCCATTTGGCGAGCC 58.379 50.000 7.26 7.26 0.00 4.70
2902 2995 5.163513 CAAATAATATCCCATTTGGCGAGC 58.836 41.667 8.48 0.00 38.10 5.03
2903 2996 6.331369 ACAAATAATATCCCATTTGGCGAG 57.669 37.500 15.96 0.00 43.36 5.03
2904 2997 7.174253 GTCTACAAATAATATCCCATTTGGCGA 59.826 37.037 15.96 11.09 43.36 5.54
2905 2998 7.305474 GTCTACAAATAATATCCCATTTGGCG 58.695 38.462 15.96 9.73 43.36 5.69
2906 2999 7.574967 CGGTCTACAAATAATATCCCATTTGGC 60.575 40.741 15.96 7.75 43.36 4.52
2907 3000 7.663905 TCGGTCTACAAATAATATCCCATTTGG 59.336 37.037 15.96 0.00 43.36 3.28
2908 3001 8.615878 TCGGTCTACAAATAATATCCCATTTG 57.384 34.615 12.42 12.42 44.20 2.32
2909 3002 9.635404 TTTCGGTCTACAAATAATATCCCATTT 57.365 29.630 0.00 0.00 0.00 2.32
2910 3003 9.284968 CTTTCGGTCTACAAATAATATCCCATT 57.715 33.333 0.00 0.00 0.00 3.16
2911 3004 8.656806 TCTTTCGGTCTACAAATAATATCCCAT 58.343 33.333 0.00 0.00 0.00 4.00
2912 3005 8.025270 TCTTTCGGTCTACAAATAATATCCCA 57.975 34.615 0.00 0.00 0.00 4.37
2913 3006 9.152595 GATCTTTCGGTCTACAAATAATATCCC 57.847 37.037 0.00 0.00 0.00 3.85
2914 3007 9.706691 TGATCTTTCGGTCTACAAATAATATCC 57.293 33.333 0.00 0.00 0.00 2.59
2917 3010 9.542462 CCTTGATCTTTCGGTCTACAAATAATA 57.458 33.333 0.00 0.00 0.00 0.98
2918 3011 7.499232 CCCTTGATCTTTCGGTCTACAAATAAT 59.501 37.037 0.00 0.00 0.00 1.28
2919 3012 6.821665 CCCTTGATCTTTCGGTCTACAAATAA 59.178 38.462 0.00 0.00 0.00 1.40
2920 3013 6.346096 CCCTTGATCTTTCGGTCTACAAATA 58.654 40.000 0.00 0.00 0.00 1.40
2921 3014 5.186198 CCCTTGATCTTTCGGTCTACAAAT 58.814 41.667 0.00 0.00 0.00 2.32
2922 3015 4.564821 CCCCTTGATCTTTCGGTCTACAAA 60.565 45.833 0.00 0.00 0.00 2.83
2923 3016 3.055385 CCCCTTGATCTTTCGGTCTACAA 60.055 47.826 0.00 0.00 0.00 2.41
2924 3017 2.500098 CCCCTTGATCTTTCGGTCTACA 59.500 50.000 0.00 0.00 0.00 2.74
2925 3018 2.158943 CCCCCTTGATCTTTCGGTCTAC 60.159 54.545 0.00 0.00 0.00 2.59
2926 3019 2.116238 CCCCCTTGATCTTTCGGTCTA 58.884 52.381 0.00 0.00 0.00 2.59
2927 3020 0.912486 CCCCCTTGATCTTTCGGTCT 59.088 55.000 0.00 0.00 0.00 3.85
2928 3021 0.618981 ACCCCCTTGATCTTTCGGTC 59.381 55.000 0.00 0.00 0.00 4.79
2929 3022 0.618981 GACCCCCTTGATCTTTCGGT 59.381 55.000 0.00 0.00 0.00 4.69
2930 3023 0.618458 TGACCCCCTTGATCTTTCGG 59.382 55.000 0.00 0.00 0.00 4.30
2931 3024 2.359900 CTTGACCCCCTTGATCTTTCG 58.640 52.381 0.00 0.00 0.00 3.46
2932 3025 2.728007 CCTTGACCCCCTTGATCTTTC 58.272 52.381 0.00 0.00 0.00 2.62
2933 3026 1.272704 GCCTTGACCCCCTTGATCTTT 60.273 52.381 0.00 0.00 0.00 2.52
2934 3027 0.332972 GCCTTGACCCCCTTGATCTT 59.667 55.000 0.00 0.00 0.00 2.40
2935 3028 0.846427 TGCCTTGACCCCCTTGATCT 60.846 55.000 0.00 0.00 0.00 2.75
2936 3029 0.259938 ATGCCTTGACCCCCTTGATC 59.740 55.000 0.00 0.00 0.00 2.92
2937 3030 0.712380 AATGCCTTGACCCCCTTGAT 59.288 50.000 0.00 0.00 0.00 2.57
2938 3031 0.251742 CAATGCCTTGACCCCCTTGA 60.252 55.000 0.00 0.00 34.04 3.02
2939 3032 0.251742 TCAATGCCTTGACCCCCTTG 60.252 55.000 0.00 0.00 36.46 3.61
2940 3033 0.486879 TTCAATGCCTTGACCCCCTT 59.513 50.000 3.69 0.00 41.05 3.95
2941 3034 0.486879 TTTCAATGCCTTGACCCCCT 59.513 50.000 3.69 0.00 41.05 4.79
2942 3035 1.347062 TTTTCAATGCCTTGACCCCC 58.653 50.000 3.69 0.00 41.05 5.40
2943 3036 2.833943 AGATTTTCAATGCCTTGACCCC 59.166 45.455 3.69 0.00 41.05 4.95
2944 3037 4.021192 TCAAGATTTTCAATGCCTTGACCC 60.021 41.667 3.69 0.00 41.05 4.46
2945 3038 5.138125 TCAAGATTTTCAATGCCTTGACC 57.862 39.130 3.69 0.00 41.05 4.02
2946 3039 6.218746 ACTTCAAGATTTTCAATGCCTTGAC 58.781 36.000 3.69 0.00 41.71 3.18
2947 3040 6.040729 TGACTTCAAGATTTTCAATGCCTTGA 59.959 34.615 0.00 0.00 40.72 3.02
2948 3041 6.218019 TGACTTCAAGATTTTCAATGCCTTG 58.782 36.000 0.00 0.00 36.49 3.61
2949 3042 6.409524 TGACTTCAAGATTTTCAATGCCTT 57.590 33.333 0.00 0.00 0.00 4.35
2950 3043 6.409524 TTGACTTCAAGATTTTCAATGCCT 57.590 33.333 0.00 0.00 0.00 4.75
2964 3057 6.348498 TGAAGACATCTGTTCTTGACTTCAA 58.652 36.000 12.85 0.00 45.07 2.69
2965 3058 5.755375 GTGAAGACATCTGTTCTTGACTTCA 59.245 40.000 11.72 11.72 45.49 3.02
2966 3059 5.755375 TGTGAAGACATCTGTTCTTGACTTC 59.245 40.000 0.00 0.00 41.68 3.01
2967 3060 5.674525 TGTGAAGACATCTGTTCTTGACTT 58.325 37.500 3.86 0.00 30.82 3.01
2968 3061 5.163364 ACTGTGAAGACATCTGTTCTTGACT 60.163 40.000 3.86 0.00 30.82 3.41
2969 3062 5.053145 ACTGTGAAGACATCTGTTCTTGAC 58.947 41.667 0.00 0.00 0.00 3.18
2970 3063 5.282055 ACTGTGAAGACATCTGTTCTTGA 57.718 39.130 0.00 0.00 0.00 3.02
2971 3064 6.703607 ACTTACTGTGAAGACATCTGTTCTTG 59.296 38.462 0.00 0.00 0.00 3.02
2972 3065 6.821388 ACTTACTGTGAAGACATCTGTTCTT 58.179 36.000 0.00 0.00 0.00 2.52
2973 3066 6.412362 ACTTACTGTGAAGACATCTGTTCT 57.588 37.500 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.