Multiple sequence alignment - TraesCS6A01G254800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G254800 chr6A 100.000 4295 0 0 1 4295 472364040 472359746 0.000000e+00 7932
1 TraesCS6A01G254800 chr6A 100.000 2286 0 0 4578 6863 472359463 472357178 0.000000e+00 4222
2 TraesCS6A01G254800 chr6A 81.215 181 30 4 6230 6407 471165639 471165818 7.180000e-30 143
3 TraesCS6A01G254800 chr6B 89.987 2367 130 44 985 3310 487545027 487547327 0.000000e+00 2959
4 TraesCS6A01G254800 chr6B 92.770 1549 65 16 4715 6221 487549730 487551273 0.000000e+00 2196
5 TraesCS6A01G254800 chr6B 84.714 857 102 20 1 847 487541903 487542740 0.000000e+00 830
6 TraesCS6A01G254800 chr6B 94.280 542 25 3 5064 5599 349666640 349666099 0.000000e+00 824
7 TraesCS6A01G254800 chr6B 93.911 542 27 3 5064 5599 378091346 378091887 0.000000e+00 813
8 TraesCS6A01G254800 chr6B 92.349 562 26 8 3391 3952 487547325 487547869 0.000000e+00 784
9 TraesCS6A01G254800 chr6B 92.804 542 33 3 5064 5599 303162106 303162647 0.000000e+00 780
10 TraesCS6A01G254800 chr6B 93.902 328 15 1 3950 4272 487549318 487549645 2.220000e-134 490
11 TraesCS6A01G254800 chr6B 89.787 235 9 6 6640 6863 487551339 487551569 3.130000e-73 287
12 TraesCS6A01G254800 chr6B 95.714 140 4 2 4578 4716 487549651 487549789 2.490000e-54 224
13 TraesCS6A01G254800 chr6B 92.437 119 7 1 863 979 487544874 487544992 1.180000e-37 169
14 TraesCS6A01G254800 chr6D 93.313 1974 81 13 985 2922 332813650 332811692 0.000000e+00 2867
15 TraesCS6A01G254800 chr6D 90.145 1380 65 26 4715 6050 332810048 332808696 0.000000e+00 1729
16 TraesCS6A01G254800 chr6D 94.725 891 40 3 3391 4276 332811015 332810127 0.000000e+00 1378
17 TraesCS6A01G254800 chr6D 86.782 696 67 15 302 979 332814373 332813685 0.000000e+00 752
18 TraesCS6A01G254800 chr6D 93.451 397 20 5 2917 3310 332811406 332811013 9.920000e-163 584
19 TraesCS6A01G254800 chr6D 93.605 172 11 0 6540 6711 332808408 332808237 2.460000e-64 257
20 TraesCS6A01G254800 chr6D 94.286 140 5 3 4578 4715 332810127 332809989 1.940000e-50 211
21 TraesCS6A01G254800 chr6D 96.330 109 4 0 6755 6863 332808164 332808056 5.470000e-41 180
22 TraesCS6A01G254800 chr6D 89.474 133 13 1 161 293 332903066 332902935 4.260000e-37 167
23 TraesCS6A01G254800 chr6D 90.000 120 12 0 6421 6540 136469665 136469546 9.220000e-34 156
24 TraesCS6A01G254800 chr1B 78.091 922 120 47 1444 2332 671608107 671608979 6.140000e-140 508
25 TraesCS6A01G254800 chr1B 80.443 542 74 18 1444 1974 672132757 672132237 1.080000e-102 385
26 TraesCS6A01G254800 chr1B 81.973 294 30 10 2061 2332 672132193 672131901 1.930000e-55 228
27 TraesCS6A01G254800 chr1A 79.238 525 78 20 1444 1959 579798915 579799417 3.070000e-88 337
28 TraesCS6A01G254800 chr1A 97.938 97 1 1 3297 3392 486046173 486046077 4.260000e-37 167
29 TraesCS6A01G254800 chr1A 90.083 121 12 0 6420 6540 498452788 498452668 2.560000e-34 158
30 TraesCS6A01G254800 chr5A 91.667 120 10 0 6422 6541 606354540 606354421 4.260000e-37 167
31 TraesCS6A01G254800 chr4D 96.040 101 3 1 3294 3393 41339614 41339514 5.510000e-36 163
32 TraesCS6A01G254800 chr4D 89.600 125 13 0 6420 6544 494876032 494875908 7.120000e-35 159
33 TraesCS6A01G254800 chr7D 94.286 105 6 0 3288 3392 561960122 561960226 1.980000e-35 161
34 TraesCS6A01G254800 chr7D 97.872 94 1 1 3301 3393 570377974 570377881 1.980000e-35 161
35 TraesCS6A01G254800 chr5D 97.872 94 1 1 3301 3393 237195374 237195281 1.980000e-35 161
36 TraesCS6A01G254800 chr5D 92.857 112 5 3 3290 3401 525478156 525478264 7.120000e-35 159
37 TraesCS6A01G254800 chr5D 88.710 124 14 0 6422 6545 452885286 452885163 1.190000e-32 152
38 TraesCS6A01G254800 chr3D 97.872 94 1 1 3301 3393 71921628 71921721 1.980000e-35 161
39 TraesCS6A01G254800 chr3B 94.286 105 5 1 3291 3394 76468500 76468604 7.120000e-35 159
40 TraesCS6A01G254800 chr3B 89.256 121 13 0 6421 6541 70295984 70295864 1.190000e-32 152
41 TraesCS6A01G254800 chr2D 90.678 118 11 0 6423 6540 109700349 109700466 2.560000e-34 158
42 TraesCS6A01G254800 chr7A 94.231 104 3 3 3308 3408 32008555 32008452 9.220000e-34 156
43 TraesCS6A01G254800 chr2A 87.879 132 16 0 6413 6544 518331594 518331463 9.220000e-34 156
44 TraesCS6A01G254800 chr2B 88.710 124 14 0 6422 6545 707570236 707570113 1.190000e-32 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G254800 chr6A 472357178 472364040 6862 True 6077.000 7932 100.000000 1 6863 2 chr6A.!!$R1 6862
1 TraesCS6A01G254800 chr6B 487541903 487551569 9666 False 992.375 2959 91.457500 1 6863 8 chr6B.!!$F3 6862
2 TraesCS6A01G254800 chr6B 349666099 349666640 541 True 824.000 824 94.280000 5064 5599 1 chr6B.!!$R1 535
3 TraesCS6A01G254800 chr6B 378091346 378091887 541 False 813.000 813 93.911000 5064 5599 1 chr6B.!!$F2 535
4 TraesCS6A01G254800 chr6B 303162106 303162647 541 False 780.000 780 92.804000 5064 5599 1 chr6B.!!$F1 535
5 TraesCS6A01G254800 chr6D 332808056 332814373 6317 True 994.750 2867 92.829625 302 6863 8 chr6D.!!$R3 6561
6 TraesCS6A01G254800 chr1B 671608107 671608979 872 False 508.000 508 78.091000 1444 2332 1 chr1B.!!$F1 888
7 TraesCS6A01G254800 chr1B 672131901 672132757 856 True 306.500 385 81.208000 1444 2332 2 chr1B.!!$R1 888
8 TraesCS6A01G254800 chr1A 579798915 579799417 502 False 337.000 337 79.238000 1444 1959 1 chr1A.!!$F1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 3160 0.182537 CAACAGACAGACCAACCCCA 59.817 55.0 0.0 0.0 0.00 4.96 F
998 3161 0.923358 AACAGACAGACCAACCCCAA 59.077 50.0 0.0 0.0 0.00 4.12 F
2391 4646 0.605319 TCATTGTGGGCGGTTCACTC 60.605 55.0 0.0 0.0 36.21 3.51 F
3322 5872 0.635009 AAGATACTCCCTCCGTCCCA 59.365 55.0 0.0 0.0 0.00 4.37 F
4284 8290 0.391130 TGTCGGCTGAACACCATAGC 60.391 55.0 0.0 0.0 36.74 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2369 4599 2.092429 AGTGAACCGCCCACAATGATAT 60.092 45.455 0.00 0.0 37.01 1.63 R
2962 5508 2.558378 CTGGTCCACAGTGCATATCAG 58.442 52.381 0.00 0.0 42.42 2.90 R
4182 8188 0.392461 CGGTACCACCCAAGGATGTG 60.392 60.000 13.54 0.0 33.75 3.21 R
4727 8734 0.107703 TAGAAGTCCGGCATGCTTGG 60.108 55.000 18.92 19.3 0.00 3.61 R
6241 10305 0.028242 ACTCTCGCGTCATCGTCATC 59.972 55.000 5.77 0.0 39.49 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 81 3.451894 TCTCTCGCTGCCATCGCA 61.452 61.111 0.00 0.00 44.78 5.10
80 82 2.510012 CTCTCGCTGCCATCGCAA 60.510 61.111 0.00 0.00 46.66 4.85
142 144 4.825679 CACCTCCCCTCCCCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
174 176 1.264749 TGCCCGTTCTAGCATGAGGT 61.265 55.000 0.00 0.00 33.08 3.85
175 177 0.750850 GCCCGTTCTAGCATGAGGTA 59.249 55.000 0.00 0.00 0.00 3.08
180 182 3.553096 CCGTTCTAGCATGAGGTATCACC 60.553 52.174 0.00 0.00 38.57 4.02
181 183 3.068165 CGTTCTAGCATGAGGTATCACCA 59.932 47.826 0.00 0.00 41.95 4.17
182 184 4.626042 GTTCTAGCATGAGGTATCACCAG 58.374 47.826 0.00 0.00 41.95 4.00
183 185 2.630098 TCTAGCATGAGGTATCACCAGC 59.370 50.000 0.00 0.00 41.95 4.85
191 193 0.535335 GGTATCACCAGCAACCTCGA 59.465 55.000 0.00 0.00 38.42 4.04
193 195 2.271800 GTATCACCAGCAACCTCGAAG 58.728 52.381 0.00 0.00 0.00 3.79
207 209 0.528466 TCGAAGATGCATCGGCTCAC 60.528 55.000 20.67 8.87 40.59 3.51
208 210 1.493950 CGAAGATGCATCGGCTCACC 61.494 60.000 20.67 5.67 41.91 4.02
263 265 4.725758 GACAGCATCGACGCAAAC 57.274 55.556 6.14 0.00 0.00 2.93
277 279 1.332904 CGCAAACTTCGTTGTCCTCAC 60.333 52.381 0.00 0.00 0.00 3.51
297 300 5.250982 TCACTCTCAGGTAGTCGTTTATCA 58.749 41.667 0.00 0.00 0.00 2.15
327 330 1.091771 CACCGCTGGAATCTCGCAAT 61.092 55.000 1.50 0.00 0.00 3.56
329 332 1.645455 CGCTGGAATCTCGCAATGG 59.355 57.895 0.00 0.00 0.00 3.16
341 344 1.815421 GCAATGGCCTCATCGTCGT 60.815 57.895 3.32 0.00 32.24 4.34
361 364 0.245539 GCTTGTAGCACCGTGGTAGA 59.754 55.000 10.68 7.08 41.89 2.59
403 406 2.280628 GACCAGTCGAAATAAGGCCTG 58.719 52.381 5.69 0.00 0.00 4.85
448 452 5.186256 TGTTGATAAGGGAAATGCCAGTA 57.814 39.130 0.00 0.00 38.95 2.74
456 460 3.139077 GGGAAATGCCAGTATTCCTACG 58.861 50.000 4.01 0.00 41.86 3.51
487 491 5.343249 CCCATCGATTTGAGAAACATTTCC 58.657 41.667 0.00 0.00 37.92 3.13
495 499 8.057742 CGATTTGAGAAACATTTCCACAAAAAG 58.942 33.333 20.49 16.07 41.85 2.27
545 549 3.319198 GCCGGGGAGGTTGTCAGA 61.319 66.667 2.18 0.00 43.70 3.27
552 556 2.526873 AGGTTGTCAGAGGCGGGT 60.527 61.111 0.00 0.00 0.00 5.28
554 558 0.834687 AGGTTGTCAGAGGCGGGTAA 60.835 55.000 0.00 0.00 0.00 2.85
578 585 2.859165 ATCGTTGTCACCACAGGATT 57.141 45.000 0.00 0.00 32.71 3.01
587 594 3.814268 CACAGGATTTGCGGCGGG 61.814 66.667 9.78 0.00 0.00 6.13
640 648 2.652496 GATCGAGCTGTCGTCGGC 60.652 66.667 5.24 5.24 46.85 5.54
681 689 3.352648 GTTTGCAATAGACCCCTTGCTA 58.647 45.455 0.00 0.00 46.16 3.49
697 705 3.872511 TGCTACGGTCGAAAAGGATTA 57.127 42.857 0.00 0.00 0.00 1.75
765 774 1.328680 CCGAGTCGCCTGATCAAAATG 59.671 52.381 7.12 0.00 0.00 2.32
769 778 1.401905 GTCGCCTGATCAAAATGGGAC 59.598 52.381 12.41 12.41 0.00 4.46
782 791 3.897122 GGGACCCCACAGCCACAA 61.897 66.667 0.00 0.00 35.81 3.33
812 821 1.746615 GCATGCACATCAGTCGGGT 60.747 57.895 14.21 0.00 0.00 5.28
857 2974 4.893424 TTTTATCTGTTTATGAGCGCCC 57.107 40.909 2.29 0.00 0.00 6.13
916 3047 1.557651 GTGATACGCCTTCGAAGTCC 58.442 55.000 23.03 12.76 39.41 3.85
981 3115 3.959991 GAGAGCTCCGGTGCCCAAC 62.960 68.421 24.18 13.34 0.00 3.77
983 3117 4.335647 AGCTCCGGTGCCCAACAG 62.336 66.667 24.18 1.16 0.00 3.16
997 3160 0.182537 CAACAGACAGACCAACCCCA 59.817 55.000 0.00 0.00 0.00 4.96
998 3161 0.923358 AACAGACAGACCAACCCCAA 59.077 50.000 0.00 0.00 0.00 4.12
999 3162 1.149101 ACAGACAGACCAACCCCAAT 58.851 50.000 0.00 0.00 0.00 3.16
1077 3240 4.537433 CCAGAGCCAGTAGCCGCC 62.537 72.222 0.00 0.00 45.47 6.13
1078 3241 4.880537 CAGAGCCAGTAGCCGCCG 62.881 72.222 0.00 0.00 45.47 6.46
1339 3502 7.391833 AGTGCGATATATCTGACTATCTGTTCA 59.608 37.037 10.93 0.00 0.00 3.18
1381 3554 1.134729 ACGACACACCAGTACCGTTTT 60.135 47.619 0.00 0.00 33.24 2.43
1428 3601 7.676683 AGTTAGTCCCATTTTCTAGCATCTA 57.323 36.000 0.00 0.00 0.00 1.98
1505 3681 7.160049 CCATCTTCAGATTGCACTAGTATCAT 58.840 38.462 0.00 0.00 31.21 2.45
1525 3701 4.020573 TCATCACTTCACTACCCAAATCGT 60.021 41.667 0.00 0.00 0.00 3.73
1599 3776 3.953612 TCCATGATTTCAGCAATGGGTAC 59.046 43.478 0.00 0.00 0.00 3.34
1618 3795 9.818270 ATGGGTACACTATTACATAAGCTACTA 57.182 33.333 0.00 0.00 0.00 1.82
1645 3822 7.868922 TCAAGTGAATCAGGATTTCAAATGTTG 59.131 33.333 0.00 0.00 0.00 3.33
1771 3954 9.322773 GGATGTATGATATGATTCACTGTATGG 57.677 37.037 0.00 0.00 0.00 2.74
1825 4009 8.633075 ATGACCAAGAACATATTTTAAATGCG 57.367 30.769 0.00 0.00 0.00 4.73
1927 4111 2.540101 AGAACGAGAGAAAAGTGCAACG 59.460 45.455 0.00 0.00 45.86 4.10
1974 4164 8.639761 TGGAGAGGTTAATCTTGCTACTTATAC 58.360 37.037 0.00 0.00 0.00 1.47
1975 4165 8.862085 GGAGAGGTTAATCTTGCTACTTATACT 58.138 37.037 0.00 0.00 0.00 2.12
2171 4392 8.931385 ATGGAAATATGTTGACATAAAAGCAC 57.069 30.769 7.82 0.00 41.60 4.40
2318 4548 1.203162 ACAAATGGGAAGGGTGATGCA 60.203 47.619 0.00 0.00 0.00 3.96
2369 4599 6.041409 TGTTCTTGATAACTTTTTGGCCATGA 59.959 34.615 6.09 0.00 0.00 3.07
2382 4637 1.547372 GGCCATGATATCATTGTGGGC 59.453 52.381 25.81 25.81 39.56 5.36
2391 4646 0.605319 TCATTGTGGGCGGTTCACTC 60.605 55.000 0.00 0.00 36.21 3.51
2492 4747 5.160607 TCACTCCGATACAAGTGGAAATT 57.839 39.130 2.96 0.00 42.52 1.82
2599 4854 3.585862 TGTTCAGATGCTTACCGAAGTC 58.414 45.455 0.00 0.00 34.90 3.01
2699 4954 4.442733 GTCATACTGCTAGAACGAAGATGC 59.557 45.833 0.00 0.00 0.00 3.91
2774 5029 7.264947 TCCCTTGAACTGAAGAAATGTTTTTC 58.735 34.615 0.00 0.00 41.34 2.29
2817 5072 3.607422 TGCATTTTGTTCACTGACGAG 57.393 42.857 0.00 0.00 0.00 4.18
2818 5073 2.290367 TGCATTTTGTTCACTGACGAGG 59.710 45.455 0.00 0.00 0.00 4.63
3006 5553 8.843262 CAGAGTATGATGGAAAATGCTTATGAA 58.157 33.333 0.00 0.00 0.00 2.57
3125 5673 2.891941 TATCCCCGCTTGCTTGCCTG 62.892 60.000 0.00 0.00 0.00 4.85
3139 5687 5.364778 TGCTTGCCTGTTTCGTATATATGT 58.635 37.500 1.91 0.00 0.00 2.29
3143 5691 7.477144 TTGCCTGTTTCGTATATATGTTGAG 57.523 36.000 1.91 0.00 0.00 3.02
3216 5764 7.913674 AAGTAGTTCTTGCTTGATTCCTTAG 57.086 36.000 0.00 0.00 34.77 2.18
3266 5815 7.553881 ACCTATCCAATCTTGTTAACAATCG 57.446 36.000 20.83 10.91 35.02 3.34
3307 5857 7.061566 TTGGCTTAAAACCAAGCTAAAAGAT 57.938 32.000 7.68 0.00 45.45 2.40
3308 5858 8.184304 TTGGCTTAAAACCAAGCTAAAAGATA 57.816 30.769 7.68 0.00 45.45 1.98
3309 5859 8.085909 TTGGCTTAAAACCAAGCTAAAAGATAC 58.914 33.333 7.68 0.00 45.45 2.24
3311 5861 8.897457 GCTTAAAACCAAGCTAAAAGATACTC 57.103 34.615 0.70 0.00 46.04 2.59
3312 5862 7.968956 GCTTAAAACCAAGCTAAAAGATACTCC 59.031 37.037 0.70 0.00 46.04 3.85
3313 5863 6.835819 AAAACCAAGCTAAAAGATACTCCC 57.164 37.500 0.00 0.00 0.00 4.30
3314 5864 5.780958 AACCAAGCTAAAAGATACTCCCT 57.219 39.130 0.00 0.00 0.00 4.20
3315 5865 5.360649 ACCAAGCTAAAAGATACTCCCTC 57.639 43.478 0.00 0.00 0.00 4.30
3316 5866 4.164413 ACCAAGCTAAAAGATACTCCCTCC 59.836 45.833 0.00 0.00 0.00 4.30
3317 5867 4.372656 CAAGCTAAAAGATACTCCCTCCG 58.627 47.826 0.00 0.00 0.00 4.63
3318 5868 3.644335 AGCTAAAAGATACTCCCTCCGT 58.356 45.455 0.00 0.00 0.00 4.69
3319 5869 3.637694 AGCTAAAAGATACTCCCTCCGTC 59.362 47.826 0.00 0.00 0.00 4.79
3320 5870 3.243805 GCTAAAAGATACTCCCTCCGTCC 60.244 52.174 0.00 0.00 0.00 4.79
3321 5871 1.790818 AAAGATACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
3322 5872 0.635009 AAGATACTCCCTCCGTCCCA 59.365 55.000 0.00 0.00 0.00 4.37
3323 5873 0.861155 AGATACTCCCTCCGTCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
3324 5874 2.071372 AGATACTCCCTCCGTCCCATA 58.929 52.381 0.00 0.00 0.00 2.74
3325 5875 2.449730 AGATACTCCCTCCGTCCCATAA 59.550 50.000 0.00 0.00 0.00 1.90
3326 5876 3.077695 AGATACTCCCTCCGTCCCATAAT 59.922 47.826 0.00 0.00 0.00 1.28
3327 5877 4.294168 AGATACTCCCTCCGTCCCATAATA 59.706 45.833 0.00 0.00 0.00 0.98
3328 5878 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3329 5879 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3330 5880 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3331 5881 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3332 5882 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3333 5883 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3334 5884 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3335 5885 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3336 5886 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3337 5887 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3338 5888 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3339 5889 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3340 5890 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3341 5891 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
3342 5892 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
3343 5893 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
3344 5894 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
3345 5895 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
3352 5902 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
3353 5903 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
3354 5904 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
3369 5919 8.707938 ACTAGTGTAGTGTTAAAAACGTTCTT 57.292 30.769 0.00 0.00 37.69 2.52
3370 5920 9.801873 ACTAGTGTAGTGTTAAAAACGTTCTTA 57.198 29.630 0.00 0.00 37.69 2.10
3384 5934 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
3385 5935 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
3386 5936 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
3387 5937 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
3388 5938 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
3389 5939 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
3495 6045 9.803315 TTCATACATAAACAGATCTGTAGTGTC 57.197 33.333 28.96 0.00 44.13 3.67
3496 6046 8.966868 TCATACATAAACAGATCTGTAGTGTCA 58.033 33.333 28.96 20.42 44.13 3.58
3497 6047 9.025020 CATACATAAACAGATCTGTAGTGTCAC 57.975 37.037 28.96 0.00 44.13 3.67
3511 6061 2.027745 AGTGTCACACCAGAGCATTAGG 60.028 50.000 3.66 0.00 34.49 2.69
3632 6182 5.008415 AGGTAGTAGTGCGTATGTCATACAC 59.992 44.000 20.36 12.75 35.48 2.90
3663 6213 7.116519 GCTAATGTTCCTAGGTCGTTTCATATC 59.883 40.741 9.08 0.00 0.00 1.63
3680 6230 6.392625 TCATATCGTTAAGCTCTAGTTGCT 57.607 37.500 7.08 7.08 43.32 3.91
3687 6237 3.760580 AAGCTCTAGTTGCTGACTTGT 57.239 42.857 12.27 0.00 41.03 3.16
3690 6240 2.926838 GCTCTAGTTGCTGACTTGTAGC 59.073 50.000 0.00 0.00 39.86 3.58
3701 6251 4.560513 GCTGACTTGTAGCAGAGAAGTTCT 60.561 45.833 4.68 4.68 41.57 3.01
3758 6308 9.442047 CAGTAATCTTGTCCTGAAAATCTAAGT 57.558 33.333 0.00 0.00 0.00 2.24
3853 6403 7.225538 ACTTGTGTTCTATCAGAAACAGAACTG 59.774 37.037 17.40 0.00 45.41 3.16
3887 6437 3.945285 GTCAAAGTTGTTCCTGGACTTCA 59.055 43.478 0.00 0.00 32.79 3.02
3991 7992 7.945033 TTTGCAACTTCAGTTAAATTCATCC 57.055 32.000 0.00 0.00 36.32 3.51
4068 8074 7.880195 GGTCTTGTATACTGATTGGATATGCTT 59.120 37.037 4.17 0.00 0.00 3.91
4155 8161 1.275421 TGTTCCCCATGCCCGTCATA 61.275 55.000 0.00 0.00 33.19 2.15
4169 8175 6.765403 TGCCCGTCATACTTAATTATTAGCT 58.235 36.000 0.00 0.00 0.00 3.32
4227 8233 1.069978 GAGCTCTGTGATCTTAGGGCC 59.930 57.143 15.23 0.00 41.35 5.80
4272 8278 1.674817 CCTCATAAACGGTTGTCGGCT 60.675 52.381 0.00 0.00 44.45 5.52
4274 8280 1.001068 TCATAAACGGTTGTCGGCTGA 59.999 47.619 0.00 0.00 44.45 4.26
4275 8281 1.801771 CATAAACGGTTGTCGGCTGAA 59.198 47.619 0.00 0.00 44.45 3.02
4276 8282 1.219646 TAAACGGTTGTCGGCTGAAC 58.780 50.000 0.00 0.00 44.45 3.18
4277 8283 0.745128 AAACGGTTGTCGGCTGAACA 60.745 50.000 0.00 0.00 44.45 3.18
4278 8284 1.433837 AACGGTTGTCGGCTGAACAC 61.434 55.000 0.00 0.00 44.45 3.32
4279 8285 2.604174 CGGTTGTCGGCTGAACACC 61.604 63.158 12.67 12.67 34.75 4.16
4280 8286 1.525077 GGTTGTCGGCTGAACACCA 60.525 57.895 16.46 0.00 31.45 4.17
4281 8287 0.889186 GGTTGTCGGCTGAACACCAT 60.889 55.000 16.46 0.00 31.45 3.55
4282 8288 1.609580 GGTTGTCGGCTGAACACCATA 60.610 52.381 16.46 0.00 31.45 2.74
4283 8289 1.732259 GTTGTCGGCTGAACACCATAG 59.268 52.381 0.00 0.00 0.00 2.23
4284 8290 0.391130 TGTCGGCTGAACACCATAGC 60.391 55.000 0.00 0.00 36.74 2.97
4286 8292 3.813596 GGCTGAACACCATAGCCG 58.186 61.111 0.00 0.00 46.47 5.52
4287 8293 1.819632 GGCTGAACACCATAGCCGG 60.820 63.158 0.00 0.00 46.47 6.13
4288 8294 2.472909 GCTGAACACCATAGCCGGC 61.473 63.158 21.89 21.89 0.00 6.13
4289 8295 1.078497 CTGAACACCATAGCCGGCA 60.078 57.895 31.54 15.56 0.00 5.69
4290 8296 0.464373 CTGAACACCATAGCCGGCAT 60.464 55.000 31.54 17.29 0.00 4.40
4291 8297 0.747644 TGAACACCATAGCCGGCATG 60.748 55.000 31.54 26.73 0.00 4.06
4624 8631 7.311092 TCTTCTGGTTGATAGGTTACTCAAA 57.689 36.000 0.00 0.00 33.45 2.69
4629 8636 7.762615 TCTGGTTGATAGGTTACTCAAATAACG 59.237 37.037 0.00 0.00 36.14 3.18
4699 8706 3.369576 GCCGGACTTCTATTGACCTCTTT 60.370 47.826 5.05 0.00 0.00 2.52
4712 8719 5.152623 TGACCTCTTTGAACTAGGACATG 57.847 43.478 0.00 0.00 31.57 3.21
4713 8720 4.593206 TGACCTCTTTGAACTAGGACATGT 59.407 41.667 0.00 0.00 31.57 3.21
4714 8721 5.778241 TGACCTCTTTGAACTAGGACATGTA 59.222 40.000 0.00 0.00 31.57 2.29
4715 8722 6.440647 TGACCTCTTTGAACTAGGACATGTAT 59.559 38.462 0.00 0.00 31.57 2.29
4716 8723 6.879400 ACCTCTTTGAACTAGGACATGTATC 58.121 40.000 0.00 0.00 34.34 2.24
4717 8724 6.440647 ACCTCTTTGAACTAGGACATGTATCA 59.559 38.462 0.00 0.00 34.34 2.15
4718 8725 7.126421 ACCTCTTTGAACTAGGACATGTATCAT 59.874 37.037 0.00 0.00 34.34 2.45
4719 8726 7.655328 CCTCTTTGAACTAGGACATGTATCATC 59.345 40.741 0.00 0.00 31.64 2.92
4720 8727 8.078060 TCTTTGAACTAGGACATGTATCATCA 57.922 34.615 0.00 0.00 0.00 3.07
4721 8728 8.539544 TCTTTGAACTAGGACATGTATCATCAA 58.460 33.333 0.00 2.92 0.00 2.57
4722 8729 8.492673 TTTGAACTAGGACATGTATCATCAAC 57.507 34.615 0.00 0.00 0.00 3.18
4723 8730 6.582636 TGAACTAGGACATGTATCATCAACC 58.417 40.000 0.00 0.00 0.00 3.77
4724 8731 6.156083 TGAACTAGGACATGTATCATCAACCA 59.844 38.462 0.00 0.00 0.00 3.67
4725 8732 6.166984 ACTAGGACATGTATCATCAACCAG 57.833 41.667 0.00 0.00 0.00 4.00
4726 8733 5.663106 ACTAGGACATGTATCATCAACCAGT 59.337 40.000 0.00 0.00 0.00 4.00
4727 8734 5.028549 AGGACATGTATCATCAACCAGTC 57.971 43.478 0.00 0.00 0.00 3.51
4728 8735 4.130118 GGACATGTATCATCAACCAGTCC 58.870 47.826 0.00 0.00 36.60 3.85
4729 8736 4.384098 GGACATGTATCATCAACCAGTCCA 60.384 45.833 0.00 0.00 41.88 4.02
4730 8737 5.178096 ACATGTATCATCAACCAGTCCAA 57.822 39.130 0.00 0.00 0.00 3.53
4731 8738 5.188434 ACATGTATCATCAACCAGTCCAAG 58.812 41.667 0.00 0.00 0.00 3.61
4732 8739 3.609853 TGTATCATCAACCAGTCCAAGC 58.390 45.455 0.00 0.00 0.00 4.01
4733 8740 2.885135 ATCATCAACCAGTCCAAGCA 57.115 45.000 0.00 0.00 0.00 3.91
4734 8741 2.885135 TCATCAACCAGTCCAAGCAT 57.115 45.000 0.00 0.00 0.00 3.79
4735 8742 2.439409 TCATCAACCAGTCCAAGCATG 58.561 47.619 0.00 0.00 0.00 4.06
4736 8743 1.135199 CATCAACCAGTCCAAGCATGC 60.135 52.381 10.51 10.51 0.00 4.06
4737 8744 0.895100 TCAACCAGTCCAAGCATGCC 60.895 55.000 15.66 0.00 0.00 4.40
4738 8745 1.973281 AACCAGTCCAAGCATGCCG 60.973 57.895 15.66 5.83 0.00 5.69
4739 8746 3.136123 CCAGTCCAAGCATGCCGG 61.136 66.667 15.66 15.88 0.00 6.13
4740 8747 2.046023 CAGTCCAAGCATGCCGGA 60.046 61.111 19.86 19.86 0.00 5.14
4742 8749 2.045926 GTCCAAGCATGCCGGACT 60.046 61.111 34.03 9.75 44.82 3.85
4743 8750 1.675641 GTCCAAGCATGCCGGACTT 60.676 57.895 34.03 14.76 44.82 3.01
4744 8751 1.377202 TCCAAGCATGCCGGACTTC 60.377 57.895 19.86 0.00 0.00 3.01
4745 8752 1.377725 CCAAGCATGCCGGACTTCT 60.378 57.895 15.66 0.00 0.00 2.85
4746 8753 0.107703 CCAAGCATGCCGGACTTCTA 60.108 55.000 15.66 0.00 0.00 2.10
4747 8754 1.475751 CCAAGCATGCCGGACTTCTAT 60.476 52.381 15.66 0.00 0.00 1.98
4748 8755 2.292267 CAAGCATGCCGGACTTCTATT 58.708 47.619 15.66 0.00 0.00 1.73
4749 8756 1.959042 AGCATGCCGGACTTCTATTG 58.041 50.000 15.66 0.00 0.00 1.90
4750 8757 0.947244 GCATGCCGGACTTCTATTGG 59.053 55.000 5.05 0.00 0.00 3.16
4751 8758 0.947244 CATGCCGGACTTCTATTGGC 59.053 55.000 5.05 0.00 45.91 4.52
4752 8759 0.179018 ATGCCGGACTTCTATTGGCC 60.179 55.000 5.05 0.00 45.12 5.36
4753 8760 1.271840 TGCCGGACTTCTATTGGCCT 61.272 55.000 5.05 0.00 45.12 5.19
4754 8761 0.533085 GCCGGACTTCTATTGGCCTC 60.533 60.000 5.05 0.00 39.83 4.70
4755 8762 1.123928 CCGGACTTCTATTGGCCTCT 58.876 55.000 3.32 0.00 0.00 3.69
4756 8763 1.486726 CCGGACTTCTATTGGCCTCTT 59.513 52.381 3.32 0.00 0.00 2.85
4757 8764 2.483889 CCGGACTTCTATTGGCCTCTTC 60.484 54.545 3.32 0.00 0.00 2.87
4785 8792 8.343168 ACTAGGACATGTACTAGATTAGATGC 57.657 38.462 39.98 7.41 45.03 3.91
4810 8817 3.910989 TCTGCTGCTAACTAGGGTATGA 58.089 45.455 0.00 0.00 0.00 2.15
4851 8862 6.715347 TCTGCTGCTAAGATACATAGTGAA 57.285 37.500 0.00 0.00 0.00 3.18
4855 8866 7.652727 TGCTGCTAAGATACATAGTGAACTAG 58.347 38.462 0.00 0.00 0.00 2.57
4891 8905 5.071115 ACTTCTGCTACTTCTTGAGGACTTT 59.929 40.000 0.00 0.00 0.00 2.66
5168 9207 6.366061 GCTCAATTCAACAAGGTTTAATGGAC 59.634 38.462 0.00 0.00 0.00 4.02
5256 9295 5.977821 TCTCAAGTCTCCTGAGGTATCTA 57.022 43.478 0.00 0.00 0.00 1.98
5270 9309 8.651389 CCTGAGGTATCTATGAACAAATCCTTA 58.349 37.037 0.00 0.00 0.00 2.69
5345 9385 3.364549 TCAAAGCACCATAATCCAAGGG 58.635 45.455 0.00 0.00 0.00 3.95
5351 9391 2.689983 CACCATAATCCAAGGGCTGAAC 59.310 50.000 0.00 0.00 0.00 3.18
5394 9434 5.932303 TGAATGTTGACTAGTGGAAGTAAGC 59.068 40.000 0.00 0.00 0.00 3.09
5396 9436 3.901844 TGTTGACTAGTGGAAGTAAGCCT 59.098 43.478 0.00 0.00 0.00 4.58
5398 9438 4.537135 TGACTAGTGGAAGTAAGCCTTG 57.463 45.455 0.00 0.00 32.03 3.61
5399 9439 3.901844 TGACTAGTGGAAGTAAGCCTTGT 59.098 43.478 0.00 0.00 32.03 3.16
5400 9440 4.021368 TGACTAGTGGAAGTAAGCCTTGTC 60.021 45.833 0.00 0.00 32.03 3.18
5401 9441 4.161102 ACTAGTGGAAGTAAGCCTTGTCT 58.839 43.478 0.00 0.00 32.03 3.41
5402 9442 4.593634 ACTAGTGGAAGTAAGCCTTGTCTT 59.406 41.667 0.00 0.00 32.03 3.01
5403 9443 4.009370 AGTGGAAGTAAGCCTTGTCTTC 57.991 45.455 12.59 12.59 36.54 2.87
5413 9457 1.672881 GCCTTGTCTTCCATTCCATCG 59.327 52.381 0.00 0.00 0.00 3.84
5573 9626 9.367444 AGGACAACTAGACTTTACGATAATTTG 57.633 33.333 0.00 0.00 0.00 2.32
5622 9676 9.950496 CTAGATTATATTTGGGTAATCTGCAGT 57.050 33.333 14.67 0.00 43.70 4.40
5671 9725 7.537715 TGTAACGACGTCCTTCATTAATCTTA 58.462 34.615 10.58 0.00 0.00 2.10
5853 9907 7.064016 GCTTTGGTGTCTGATACAAAAACAAAA 59.936 33.333 8.23 0.00 40.63 2.44
5870 9924 2.712057 AAAAAGAAGTGATGCGCCAG 57.288 45.000 4.18 0.00 0.00 4.85
5907 9969 0.602905 AGAGCACCTGTAACGGCAAC 60.603 55.000 0.00 0.00 0.00 4.17
6016 10080 0.107508 TTGCCTGGCTCTGAGTATGC 60.108 55.000 21.03 5.64 0.00 3.14
6060 10124 1.975680 TCCCGTTCTTTGAGGTTAGCT 59.024 47.619 0.00 0.00 0.00 3.32
6084 10148 4.561606 TCTTATCGTTTTTCTAGCGTGCTC 59.438 41.667 0.00 0.00 0.00 4.26
6102 10166 2.417719 CTCCAGCGTCAAAGCTTAACT 58.582 47.619 0.00 0.00 46.80 2.24
6103 10167 2.143122 TCCAGCGTCAAAGCTTAACTG 58.857 47.619 0.00 3.38 46.80 3.16
6106 10170 2.096218 CAGCGTCAAAGCTTAACTGACC 60.096 50.000 19.30 13.70 46.80 4.02
6107 10171 2.143925 GCGTCAAAGCTTAACTGACCT 58.856 47.619 19.30 0.00 36.87 3.85
6108 10172 2.096218 GCGTCAAAGCTTAACTGACCTG 60.096 50.000 19.30 10.62 36.87 4.00
6118 10182 1.901591 AACTGACCTGTTGCTGGATG 58.098 50.000 0.00 0.00 0.00 3.51
6186 10250 3.788227 TGGGCAATTCAGTGAACTACT 57.212 42.857 7.96 0.00 41.36 2.57
6204 10268 8.562892 TGAACTACTAAAGTATACGTGCCTATC 58.437 37.037 0.00 0.00 37.50 2.08
6210 10274 2.097825 GTATACGTGCCTATCGGGGAT 58.902 52.381 0.00 0.00 37.86 3.85
6214 10278 1.254026 CGTGCCTATCGGGGATAAGA 58.746 55.000 0.00 0.00 37.86 2.10
6221 10285 3.378742 CCTATCGGGGATAAGAGATGACG 59.621 52.174 0.00 0.00 0.00 4.35
6222 10286 1.617322 TCGGGGATAAGAGATGACGG 58.383 55.000 0.00 0.00 0.00 4.79
6223 10287 1.133575 TCGGGGATAAGAGATGACGGT 60.134 52.381 0.00 0.00 0.00 4.83
6224 10288 1.000163 CGGGGATAAGAGATGACGGTG 60.000 57.143 0.00 0.00 0.00 4.94
6225 10289 1.270358 GGGGATAAGAGATGACGGTGC 60.270 57.143 0.00 0.00 0.00 5.01
6226 10290 1.270358 GGGATAAGAGATGACGGTGCC 60.270 57.143 0.00 0.00 0.00 5.01
6227 10291 1.689273 GGATAAGAGATGACGGTGCCT 59.311 52.381 0.00 0.00 0.00 4.75
6228 10292 2.891580 GGATAAGAGATGACGGTGCCTA 59.108 50.000 0.00 0.00 0.00 3.93
6229 10293 3.511934 GGATAAGAGATGACGGTGCCTAT 59.488 47.826 0.00 0.00 0.00 2.57
6230 10294 4.021016 GGATAAGAGATGACGGTGCCTATT 60.021 45.833 0.00 0.00 0.00 1.73
6231 10295 2.898729 AGAGATGACGGTGCCTATTG 57.101 50.000 0.00 0.00 0.00 1.90
6232 10296 1.414181 AGAGATGACGGTGCCTATTGG 59.586 52.381 0.00 0.00 0.00 3.16
6233 10297 0.469917 AGATGACGGTGCCTATTGGG 59.530 55.000 0.00 0.00 38.36 4.12
6234 10298 0.535102 GATGACGGTGCCTATTGGGG 60.535 60.000 0.00 0.00 35.12 4.96
6235 10299 0.986019 ATGACGGTGCCTATTGGGGA 60.986 55.000 0.00 0.00 35.12 4.81
6236 10300 0.986019 TGACGGTGCCTATTGGGGAT 60.986 55.000 0.00 0.00 37.86 3.85
6237 10301 1.053424 GACGGTGCCTATTGGGGATA 58.947 55.000 0.00 0.00 37.86 2.59
6238 10302 1.418637 GACGGTGCCTATTGGGGATAA 59.581 52.381 0.00 0.00 37.86 1.75
6239 10303 1.420138 ACGGTGCCTATTGGGGATAAG 59.580 52.381 0.00 0.00 37.86 1.73
6240 10304 1.697432 CGGTGCCTATTGGGGATAAGA 59.303 52.381 0.00 0.00 37.86 2.10
6241 10305 2.289694 CGGTGCCTATTGGGGATAAGAG 60.290 54.545 0.00 0.00 37.86 2.85
6242 10306 2.979678 GGTGCCTATTGGGGATAAGAGA 59.020 50.000 0.00 0.00 37.86 3.10
6243 10307 3.589288 GGTGCCTATTGGGGATAAGAGAT 59.411 47.826 0.00 0.00 37.86 2.75
6244 10308 4.566488 GGTGCCTATTGGGGATAAGAGATG 60.566 50.000 0.00 0.00 37.86 2.90
6245 10309 4.287067 GTGCCTATTGGGGATAAGAGATGA 59.713 45.833 0.00 0.00 37.86 2.92
6246 10310 4.287067 TGCCTATTGGGGATAAGAGATGAC 59.713 45.833 0.00 0.00 35.12 3.06
6252 10316 3.574396 TGGGGATAAGAGATGACGATGAC 59.426 47.826 0.00 0.00 0.00 3.06
6271 10335 0.644331 CGCGAGAGTGCATCTTTGAG 59.356 55.000 0.00 0.00 38.84 3.02
6307 10372 2.119495 GAGGTGTCTGGGGTATCATGT 58.881 52.381 0.00 0.00 0.00 3.21
6308 10373 3.305720 GAGGTGTCTGGGGTATCATGTA 58.694 50.000 0.00 0.00 0.00 2.29
6318 10383 2.069273 GGTATCATGTATGTGCCGCTC 58.931 52.381 0.00 0.00 0.00 5.03
6340 10405 2.324860 GCGGTTTGTGATGGTTTTAGC 58.675 47.619 0.00 0.00 0.00 3.09
6359 10424 9.406828 GTTTTAGCCTGGTTTTTCATTAGTTAG 57.593 33.333 0.00 0.00 0.00 2.34
6364 10429 5.476945 CCTGGTTTTTCATTAGTTAGCTGGT 59.523 40.000 0.00 0.00 0.00 4.00
6385 10452 7.387948 GCTGGTCAACTCTCTTCTGTTTATTAA 59.612 37.037 0.00 0.00 0.00 1.40
6405 10472 9.762933 TTATTAATGGATAGGCAAATCTTTTGC 57.237 29.630 14.88 14.88 44.22 3.68
6413 10480 3.391506 GCAAATCTTTTGCCAACCTCT 57.608 42.857 12.74 0.00 39.38 3.69
6414 10481 4.519540 GCAAATCTTTTGCCAACCTCTA 57.480 40.909 12.74 0.00 39.38 2.43
6418 10485 6.427853 GCAAATCTTTTGCCAACCTCTAAAAT 59.572 34.615 12.74 0.00 39.38 1.82
6419 10486 7.041167 GCAAATCTTTTGCCAACCTCTAAAATT 60.041 33.333 12.74 0.00 39.38 1.82
6420 10487 8.839343 CAAATCTTTTGCCAACCTCTAAAATTT 58.161 29.630 0.00 0.00 0.00 1.82
6421 10488 7.967890 ATCTTTTGCCAACCTCTAAAATTTG 57.032 32.000 0.00 0.00 0.00 2.32
6422 10489 6.883744 TCTTTTGCCAACCTCTAAAATTTGT 58.116 32.000 0.00 0.00 0.00 2.83
6423 10490 8.012957 TCTTTTGCCAACCTCTAAAATTTGTA 57.987 30.769 0.00 0.00 0.00 2.41
6424 10491 7.923878 TCTTTTGCCAACCTCTAAAATTTGTAC 59.076 33.333 0.00 0.00 0.00 2.90
6425 10492 6.969993 TTGCCAACCTCTAAAATTTGTACT 57.030 33.333 0.00 0.00 0.00 2.73
6426 10493 6.969993 TGCCAACCTCTAAAATTTGTACTT 57.030 33.333 0.00 0.00 0.00 2.24
6427 10494 6.977213 TGCCAACCTCTAAAATTTGTACTTC 58.023 36.000 0.00 0.00 0.00 3.01
6428 10495 6.775629 TGCCAACCTCTAAAATTTGTACTTCT 59.224 34.615 0.00 0.00 0.00 2.85
6429 10496 7.286775 TGCCAACCTCTAAAATTTGTACTTCTT 59.713 33.333 0.00 0.00 0.00 2.52
6430 10497 7.808381 GCCAACCTCTAAAATTTGTACTTCTTC 59.192 37.037 0.00 0.00 0.00 2.87
6431 10498 9.067986 CCAACCTCTAAAATTTGTACTTCTTCT 57.932 33.333 0.00 0.00 0.00 2.85
6432 10499 9.884465 CAACCTCTAAAATTTGTACTTCTTCTG 57.116 33.333 0.00 0.00 0.00 3.02
6433 10500 9.628500 AACCTCTAAAATTTGTACTTCTTCTGT 57.372 29.630 0.00 0.00 0.00 3.41
6434 10501 9.274206 ACCTCTAAAATTTGTACTTCTTCTGTC 57.726 33.333 0.00 0.00 0.00 3.51
6435 10502 8.722394 CCTCTAAAATTTGTACTTCTTCTGTCC 58.278 37.037 0.00 0.00 0.00 4.02
6436 10503 8.306680 TCTAAAATTTGTACTTCTTCTGTCCG 57.693 34.615 0.00 0.00 0.00 4.79
6437 10504 8.145767 TCTAAAATTTGTACTTCTTCTGTCCGA 58.854 33.333 0.00 0.00 0.00 4.55
6438 10505 7.562454 AAAATTTGTACTTCTTCTGTCCGAA 57.438 32.000 0.00 0.00 0.00 4.30
6439 10506 7.562454 AAATTTGTACTTCTTCTGTCCGAAA 57.438 32.000 0.00 0.00 0.00 3.46
6440 10507 7.562454 AATTTGTACTTCTTCTGTCCGAAAA 57.438 32.000 0.00 0.00 0.00 2.29
6441 10508 6.988622 TTTGTACTTCTTCTGTCCGAAAAA 57.011 33.333 0.00 0.00 0.00 1.94
6465 10532 9.643693 AAAACTTGTCATTCAAATGGATGTATC 57.356 29.630 1.75 0.00 37.03 2.24
6466 10533 8.585471 AACTTGTCATTCAAATGGATGTATCT 57.415 30.769 1.75 0.00 37.03 1.98
6467 10534 9.685276 AACTTGTCATTCAAATGGATGTATCTA 57.315 29.630 1.75 0.00 37.03 1.98
6468 10535 9.334947 ACTTGTCATTCAAATGGATGTATCTAG 57.665 33.333 1.75 3.97 37.03 2.43
6469 10536 7.734924 TGTCATTCAAATGGATGTATCTAGC 57.265 36.000 1.75 0.00 37.03 3.42
6470 10537 7.281841 TGTCATTCAAATGGATGTATCTAGCA 58.718 34.615 1.75 0.00 37.03 3.49
6471 10538 7.227314 TGTCATTCAAATGGATGTATCTAGCAC 59.773 37.037 1.75 0.00 37.03 4.40
6472 10539 6.712095 TCATTCAAATGGATGTATCTAGCACC 59.288 38.462 1.75 0.00 37.03 5.01
6473 10540 5.628797 TCAAATGGATGTATCTAGCACCA 57.371 39.130 0.00 0.00 0.00 4.17
6474 10541 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
6475 10542 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
6476 10543 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
6477 10544 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
6478 10545 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
6479 10546 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
6480 10547 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
6481 10548 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
6493 10560 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
6494 10561 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
6495 10562 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
6496 10563 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
6497 10564 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
6498 10565 9.764363 CAAGTTAGTGCTAGATACATCCATTTA 57.236 33.333 0.00 0.00 0.00 1.40
6500 10567 9.988815 AGTTAGTGCTAGATACATCCATTTAAG 57.011 33.333 0.00 0.00 0.00 1.85
6501 10568 9.982651 GTTAGTGCTAGATACATCCATTTAAGA 57.017 33.333 0.00 0.00 0.00 2.10
6514 10581 9.920946 ACATCCATTTAAGAAATAAGCTTAGGA 57.079 29.630 12.54 8.98 29.69 2.94
6516 10583 9.920946 ATCCATTTAAGAAATAAGCTTAGGACA 57.079 29.630 12.54 0.00 28.57 4.02
6517 10584 9.747898 TCCATTTAAGAAATAAGCTTAGGACAA 57.252 29.630 12.54 0.00 0.00 3.18
6519 10586 9.508567 CATTTAAGAAATAAGCTTAGGACAAGC 57.491 33.333 12.54 0.71 43.31 4.01
6535 10602 2.157738 CAAGCTTTCTTGGACAGAGGG 58.842 52.381 0.00 0.00 44.53 4.30
6536 10603 1.734655 AGCTTTCTTGGACAGAGGGA 58.265 50.000 0.00 0.00 31.12 4.20
6537 10604 1.627834 AGCTTTCTTGGACAGAGGGAG 59.372 52.381 0.00 0.00 31.12 4.30
6538 10605 1.349357 GCTTTCTTGGACAGAGGGAGT 59.651 52.381 0.00 0.00 31.12 3.85
6547 10614 4.689062 TGGACAGAGGGAGTAGAAAAGAT 58.311 43.478 0.00 0.00 0.00 2.40
6574 10641 1.468520 CCCTCGTCCTCGTACGTTTTA 59.531 52.381 16.05 0.00 43.31 1.52
6609 10676 3.348647 CACTGTGGGTGGTAATCATGA 57.651 47.619 0.00 0.00 41.90 3.07
6637 10704 9.847224 AATAATTTGTACTACTACTTGGGATGG 57.153 33.333 0.00 0.00 0.00 3.51
6644 10711 1.342674 ACTACTTGGGATGGGACGCTA 60.343 52.381 0.00 0.00 0.00 4.26
6718 10791 8.189460 AGAAACTGACGAGTATATTCTAACCAC 58.811 37.037 0.00 0.00 28.91 4.16
6731 10804 3.667360 TCTAACCACCTTTTTAGACCGC 58.333 45.455 0.00 0.00 30.86 5.68
6859 10963 0.884704 TTTCTGACCAACGCCAGCTC 60.885 55.000 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 92 3.329231 CGGTGTTCTTGAGCGCAA 58.671 55.556 11.47 2.03 0.00 4.85
98 100 0.035458 CTCCAAGGAGCGGTGTTCTT 59.965 55.000 2.68 0.00 35.31 2.52
152 154 2.511600 ATGCTAGAACGGGCACGC 60.512 61.111 9.12 0.00 46.04 5.34
155 157 1.264749 ACCTCATGCTAGAACGGGCA 61.265 55.000 0.00 0.00 42.80 5.36
174 176 2.176045 TCTTCGAGGTTGCTGGTGATA 58.824 47.619 0.00 0.00 0.00 2.15
175 177 0.976641 TCTTCGAGGTTGCTGGTGAT 59.023 50.000 0.00 0.00 0.00 3.06
180 182 1.329906 GATGCATCTTCGAGGTTGCTG 59.670 52.381 25.14 8.03 36.10 4.41
181 183 1.661341 GATGCATCTTCGAGGTTGCT 58.339 50.000 25.14 14.28 36.10 3.91
182 184 0.302890 CGATGCATCTTCGAGGTTGC 59.697 55.000 23.73 20.23 38.88 4.17
183 185 0.933097 CCGATGCATCTTCGAGGTTG 59.067 55.000 23.73 5.39 38.88 3.77
189 191 1.493950 GGTGAGCCGATGCATCTTCG 61.494 60.000 23.73 12.94 41.13 3.79
191 193 4.547859 GGTGAGCCGATGCATCTT 57.452 55.556 23.73 9.76 41.13 2.40
223 225 4.085204 ATTACGACGGCGGGGCAA 62.085 61.111 18.49 3.27 43.17 4.52
247 249 0.512952 GAAGTTTGCGTCGATGCTGT 59.487 50.000 28.53 10.43 35.36 4.40
262 264 4.864969 CCTGAGAGTGAGGACAACGAAGT 61.865 52.174 0.00 0.00 35.36 3.01
263 265 2.352225 CCTGAGAGTGAGGACAACGAAG 60.352 54.545 0.00 0.00 31.48 3.79
277 279 5.444983 CGATGATAAACGACTACCTGAGAG 58.555 45.833 0.00 0.00 0.00 3.20
297 300 2.108514 CAGCGGTGGATGTTGCGAT 61.109 57.895 6.74 0.00 0.00 4.58
318 321 0.602106 CGATGAGGCCATTGCGAGAT 60.602 55.000 5.01 0.00 38.85 2.75
327 330 2.942796 AAGCACGACGATGAGGCCA 61.943 57.895 5.01 0.00 0.00 5.36
329 332 0.457853 TACAAGCACGACGATGAGGC 60.458 55.000 0.00 0.00 0.00 4.70
448 452 3.193691 CGATGGGCTTAGATCGTAGGAAT 59.806 47.826 0.00 0.00 37.33 3.01
456 460 4.887748 TCTCAAATCGATGGGCTTAGATC 58.112 43.478 0.00 0.00 0.00 2.75
487 491 0.584876 GACCCCGTCGACTTTTTGTG 59.415 55.000 14.70 0.00 0.00 3.33
495 499 2.280823 GATCCACAGACCCCGTCGAC 62.281 65.000 5.18 5.18 37.67 4.20
532 536 2.266055 CGCCTCTGACAACCTCCC 59.734 66.667 0.00 0.00 0.00 4.30
541 545 2.029623 GATACAGTTACCCGCCTCTGA 58.970 52.381 0.00 0.00 0.00 3.27
545 549 1.134907 CAACGATACAGTTACCCGCCT 60.135 52.381 0.00 0.00 32.35 5.52
552 556 4.552355 CTGTGGTGACAACGATACAGTTA 58.448 43.478 2.10 0.00 46.06 2.24
554 558 2.288825 CCTGTGGTGACAACGATACAGT 60.289 50.000 8.24 0.00 46.06 3.55
559 563 2.813754 CAAATCCTGTGGTGACAACGAT 59.186 45.455 0.00 0.00 46.06 3.73
564 571 2.627791 CGCAAATCCTGTGGTGACA 58.372 52.632 0.00 0.00 38.70 3.58
587 594 2.037251 ACACATGTCTATATGGGGACGC 59.963 50.000 0.00 0.00 35.76 5.19
627 635 4.500116 GAGGGCCGACGACAGCTC 62.500 72.222 0.00 0.00 0.00 4.09
647 655 4.020378 CAAACCGACCGGGCGTTG 62.020 66.667 31.15 23.62 40.62 4.10
654 662 0.725117 GGTCTATTGCAAACCGACCG 59.275 55.000 21.63 1.57 38.29 4.79
681 689 3.731089 TGTTGTAATCCTTTTCGACCGT 58.269 40.909 0.00 0.00 0.00 4.83
697 705 4.391523 GGTTTGCAACTTGAACATTGTTGT 59.608 37.500 6.80 0.00 41.93 3.32
765 774 3.444818 TTTGTGGCTGTGGGGTCCC 62.445 63.158 0.00 0.00 0.00 4.46
782 791 2.190578 GCATGCCTAGACCGCCTT 59.809 61.111 6.36 0.00 0.00 4.35
831 840 6.017440 GGCGCTCATAAACAGATAAAATACCA 60.017 38.462 7.64 0.00 0.00 3.25
832 841 6.371389 GGCGCTCATAAACAGATAAAATACC 58.629 40.000 7.64 0.00 0.00 2.73
833 842 6.017440 TGGGCGCTCATAAACAGATAAAATAC 60.017 38.462 5.44 0.00 0.00 1.89
834 843 6.017440 GTGGGCGCTCATAAACAGATAAAATA 60.017 38.462 15.93 0.00 0.00 1.40
835 844 4.887071 TGGGCGCTCATAAACAGATAAAAT 59.113 37.500 5.44 0.00 0.00 1.82
836 845 4.095782 GTGGGCGCTCATAAACAGATAAAA 59.904 41.667 15.93 0.00 0.00 1.52
837 846 3.625764 GTGGGCGCTCATAAACAGATAAA 59.374 43.478 15.93 0.00 0.00 1.40
838 847 3.118408 AGTGGGCGCTCATAAACAGATAA 60.118 43.478 15.93 0.00 0.00 1.75
842 851 1.453155 AAGTGGGCGCTCATAAACAG 58.547 50.000 15.93 0.00 0.00 3.16
857 2974 0.320374 TGTAGAGGCGACCCAAAGTG 59.680 55.000 0.00 0.00 0.00 3.16
916 3047 2.347452 CCTACCAAAGAATGCACGTACG 59.653 50.000 15.01 15.01 0.00 3.67
974 3107 0.465460 GTTGGTCTGTCTGTTGGGCA 60.465 55.000 0.00 0.00 0.00 5.36
979 3113 0.923358 TTGGGGTTGGTCTGTCTGTT 59.077 50.000 0.00 0.00 0.00 3.16
981 3115 3.282021 CATATTGGGGTTGGTCTGTCTG 58.718 50.000 0.00 0.00 0.00 3.51
983 3117 2.654863 CCATATTGGGGTTGGTCTGTC 58.345 52.381 0.00 0.00 32.67 3.51
1016 3179 1.583054 GGTTTCTGTCTCGTGCTTGT 58.417 50.000 0.00 0.00 0.00 3.16
1381 3554 2.091610 TGGGACCTCCAAATTCACAACA 60.092 45.455 0.00 0.00 43.84 3.33
1411 3584 8.944029 CACTCATAATAGATGCTAGAAAATGGG 58.056 37.037 0.00 0.00 0.00 4.00
1505 3681 3.322541 TCACGATTTGGGTAGTGAAGTGA 59.677 43.478 0.00 0.00 40.19 3.41
1546 3723 6.683974 AATTGCTCAATGTATGTCCAGTAC 57.316 37.500 0.00 0.00 0.00 2.73
1618 3795 8.130671 ACATTTGAAATCCTGATTCACTTGAT 57.869 30.769 0.00 0.00 0.00 2.57
1645 3822 8.919777 ATCCACCTACTAAATATTACTTTGCC 57.080 34.615 0.00 0.00 0.00 4.52
1825 4009 6.792326 AGTAAAACTTTGCCACAACTAAGAC 58.208 36.000 0.00 0.00 0.00 3.01
1974 4164 4.336433 TCAACTGCAGAAGAAAACTGGAAG 59.664 41.667 23.35 0.00 35.52 3.46
1975 4165 4.269183 TCAACTGCAGAAGAAAACTGGAA 58.731 39.130 23.35 0.00 35.52 3.53
1976 4166 3.884895 TCAACTGCAGAAGAAAACTGGA 58.115 40.909 23.35 0.00 36.09 3.86
1977 4167 4.843220 ATCAACTGCAGAAGAAAACTGG 57.157 40.909 23.35 0.00 36.09 4.00
2204 4427 4.981806 TGGTTCCAAGTTTTCAGAACTG 57.018 40.909 0.00 0.00 38.87 3.16
2267 4490 2.789213 TGTTCAATTTCGGATGCCTCA 58.211 42.857 0.00 0.00 0.00 3.86
2347 4577 6.855763 ATCATGGCCAAAAAGTTATCAAGA 57.144 33.333 10.96 0.00 0.00 3.02
2369 4599 2.092429 AGTGAACCGCCCACAATGATAT 60.092 45.455 0.00 0.00 37.01 1.63
2404 4659 7.086230 AGAAAATGCACAAAATCAGCAAAAA 57.914 28.000 0.00 0.00 42.15 1.94
2405 4660 6.680874 AGAAAATGCACAAAATCAGCAAAA 57.319 29.167 0.00 0.00 42.15 2.44
2406 4661 6.487960 CAAGAAAATGCACAAAATCAGCAAA 58.512 32.000 0.00 0.00 42.15 3.68
2407 4662 5.504337 GCAAGAAAATGCACAAAATCAGCAA 60.504 36.000 0.00 0.00 45.70 3.91
2408 4663 4.024725 GCAAGAAAATGCACAAAATCAGCA 60.025 37.500 0.00 0.00 45.70 4.41
2409 4664 4.460505 GCAAGAAAATGCACAAAATCAGC 58.539 39.130 0.00 0.00 45.70 4.26
2492 4747 4.835056 TGAGAGATTTGAAGTCCTGTCAGA 59.165 41.667 0.00 0.00 0.00 3.27
2599 4854 4.065088 TCCCAGATTTCAGTGAACGAAAG 58.935 43.478 4.68 0.00 35.91 2.62
2674 4929 5.899120 TCTTCGTTCTAGCAGTATGACTT 57.101 39.130 0.00 0.00 39.69 3.01
2699 4954 6.211587 TCATTGATCCACTTGCTAAAATGG 57.788 37.500 0.00 0.00 0.00 3.16
2774 5029 6.469915 GCAAAGCTTTCACATTTTCCAAAAAG 59.530 34.615 9.23 0.00 0.00 2.27
2817 5072 6.874288 ATCATAAGCTAGCATTTCTTCACC 57.126 37.500 18.83 0.00 0.00 4.02
2818 5073 8.600449 AGTATCATAAGCTAGCATTTCTTCAC 57.400 34.615 18.83 5.69 0.00 3.18
2859 5114 7.553881 TGAGTATAAAACTGAATAAGGCTGC 57.446 36.000 0.00 0.00 39.07 5.25
2962 5508 2.558378 CTGGTCCACAGTGCATATCAG 58.442 52.381 0.00 0.00 42.42 2.90
3037 5584 7.495934 AGGTATAAGATTGAATCAAGGTTGTCG 59.504 37.037 8.03 0.00 0.00 4.35
3076 5623 6.995686 ACACAACAAATACACAGGTTGAGATA 59.004 34.615 10.00 0.00 42.34 1.98
3092 5640 3.880490 GCGGGGATATGATACACAACAAA 59.120 43.478 0.00 0.00 0.00 2.83
3094 5642 2.703536 AGCGGGGATATGATACACAACA 59.296 45.455 0.00 0.00 0.00 3.33
3153 5701 3.834938 CCTCTCCCTAACCCTAGTACAG 58.165 54.545 0.00 0.00 0.00 2.74
3216 5764 4.293662 CTCATATAAAGAGGGCCCCTTC 57.706 50.000 21.43 11.19 31.76 3.46
3293 5842 4.164413 GGAGGGAGTATCTTTTAGCTTGGT 59.836 45.833 0.00 0.00 33.73 3.67
3307 5857 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3308 5858 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3309 5859 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3310 5860 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3311 5861 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3312 5862 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3313 5863 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3314 5864 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3315 5865 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3316 5866 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
3317 5867 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
3318 5868 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
3319 5869 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
3325 5875 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
3326 5876 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
3327 5877 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
3328 5878 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
3329 5879 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
3330 5880 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
3331 5881 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
3344 5894 8.707938 AAGAACGTTTTTAACACTACACTAGT 57.292 30.769 0.46 0.00 40.28 2.57
3358 5908 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
3359 5909 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
3360 5910 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
3361 5911 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
3362 5912 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
3363 5913 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
3364 5914 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
3365 5915 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
3366 5916 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
3367 5917 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
3368 5918 6.100714 GGTACTCCCTCTGTCCCAAAATATAA 59.899 42.308 0.00 0.00 0.00 0.98
3369 5919 5.605488 GGTACTCCCTCTGTCCCAAAATATA 59.395 44.000 0.00 0.00 0.00 0.86
3370 5920 4.412528 GGTACTCCCTCTGTCCCAAAATAT 59.587 45.833 0.00 0.00 0.00 1.28
3371 5921 3.778629 GGTACTCCCTCTGTCCCAAAATA 59.221 47.826 0.00 0.00 0.00 1.40
3372 5922 2.576648 GGTACTCCCTCTGTCCCAAAAT 59.423 50.000 0.00 0.00 0.00 1.82
3373 5923 1.982958 GGTACTCCCTCTGTCCCAAAA 59.017 52.381 0.00 0.00 0.00 2.44
3374 5924 1.151413 AGGTACTCCCTCTGTCCCAAA 59.849 52.381 0.00 0.00 40.71 3.28
3375 5925 0.790993 AGGTACTCCCTCTGTCCCAA 59.209 55.000 0.00 0.00 40.71 4.12
3376 5926 0.790993 AAGGTACTCCCTCTGTCCCA 59.209 55.000 0.00 0.00 45.47 4.37
3377 5927 1.487300 GAAGGTACTCCCTCTGTCCC 58.513 60.000 0.00 0.00 45.47 4.46
3378 5928 1.007359 AGGAAGGTACTCCCTCTGTCC 59.993 57.143 0.00 0.00 42.49 4.02
3379 5929 2.535836 AGGAAGGTACTCCCTCTGTC 57.464 55.000 0.00 0.00 42.49 3.51
3380 5930 4.628661 ATTAGGAAGGTACTCCCTCTGT 57.371 45.455 4.87 0.00 42.49 3.41
3381 5931 5.425539 TCAAATTAGGAAGGTACTCCCTCTG 59.574 44.000 4.87 1.52 42.49 3.35
3382 5932 5.600749 TCAAATTAGGAAGGTACTCCCTCT 58.399 41.667 4.87 0.00 42.49 3.69
3383 5933 5.952347 TCAAATTAGGAAGGTACTCCCTC 57.048 43.478 4.87 0.00 42.49 4.30
3385 5935 6.718294 TCTTTCAAATTAGGAAGGTACTCCC 58.282 40.000 0.00 0.00 38.49 4.30
3386 5936 9.901172 TTATCTTTCAAATTAGGAAGGTACTCC 57.099 33.333 0.00 0.00 38.49 3.85
3418 5968 1.611491 GATCCCAGCTCTCTCGGTTAG 59.389 57.143 0.00 0.00 0.00 2.34
3423 5973 3.826157 AGAATAAGATCCCAGCTCTCTCG 59.174 47.826 0.00 0.00 0.00 4.04
3495 6045 2.636830 CCTTCCTAATGCTCTGGTGTG 58.363 52.381 0.00 0.00 0.00 3.82
3496 6046 1.065126 GCCTTCCTAATGCTCTGGTGT 60.065 52.381 0.00 0.00 0.00 4.16
3497 6047 1.065199 TGCCTTCCTAATGCTCTGGTG 60.065 52.381 0.00 0.00 0.00 4.17
3511 6061 1.760192 AGATGGTGCATTCTGCCTTC 58.240 50.000 0.00 0.00 44.23 3.46
3565 6115 7.625828 AGTGGCAGAAAGGTTGTATTTATAC 57.374 36.000 0.00 0.00 0.00 1.47
3632 6182 4.142138 ACGACCTAGGAACATTAGCTTCAG 60.142 45.833 17.98 0.00 0.00 3.02
3663 6213 3.839293 AGTCAGCAACTAGAGCTTAACG 58.161 45.455 10.92 2.35 41.14 3.18
3680 6230 5.127693 GAGAACTTCTCTGCTACAAGTCA 57.872 43.478 11.06 0.00 40.30 3.41
3758 6308 9.691362 GAGTAATGATTTAGAAAAAGGTGCAAA 57.309 29.630 0.00 0.00 0.00 3.68
3853 6403 0.670162 ACTTTGACACAGTGGCATGC 59.330 50.000 10.80 9.90 33.90 4.06
3887 6437 8.272659 TCATCTTGATCTTCCTTATTCCTGAT 57.727 34.615 0.00 0.00 0.00 2.90
3967 7968 7.495901 TGGATGAATTTAACTGAAGTTGCAAA 58.504 30.769 0.00 0.41 38.90 3.68
3991 7992 8.598041 AGGGCTAGATAAAATACTGGACTATTG 58.402 37.037 0.00 0.00 0.00 1.90
4182 8188 0.392461 CGGTACCACCCAAGGATGTG 60.392 60.000 13.54 0.00 33.75 3.21
4233 8239 2.041762 TGAGAGCTCCCAGGCCAT 59.958 61.111 10.93 0.00 0.00 4.40
4238 8244 1.049855 ATGAGGCTGAGAGCTCCCAG 61.050 60.000 20.18 20.18 41.99 4.45
4272 8278 0.747644 CATGCCGGCTATGGTGTTCA 60.748 55.000 29.70 2.45 0.00 3.18
4274 8280 1.453745 CCATGCCGGCTATGGTGTT 60.454 57.895 32.73 9.01 40.15 3.32
4275 8281 2.192979 CCATGCCGGCTATGGTGT 59.807 61.111 32.73 11.05 40.15 4.16
4624 8631 2.790433 ACAACAGGAATGGCACGTTAT 58.210 42.857 0.00 0.00 0.00 1.89
4629 8636 5.865085 TCCTATATACAACAGGAATGGCAC 58.135 41.667 0.00 0.00 35.52 5.01
4699 8706 6.156083 TGGTTGATGATACATGTCCTAGTTCA 59.844 38.462 0.00 0.00 0.00 3.18
4712 8719 3.609853 TGCTTGGACTGGTTGATGATAC 58.390 45.455 0.00 0.00 0.00 2.24
4713 8720 3.998913 TGCTTGGACTGGTTGATGATA 57.001 42.857 0.00 0.00 0.00 2.15
4714 8721 2.885135 TGCTTGGACTGGTTGATGAT 57.115 45.000 0.00 0.00 0.00 2.45
4715 8722 2.439409 CATGCTTGGACTGGTTGATGA 58.561 47.619 0.00 0.00 0.00 2.92
4716 8723 1.135199 GCATGCTTGGACTGGTTGATG 60.135 52.381 11.37 0.00 0.00 3.07
4717 8724 1.180029 GCATGCTTGGACTGGTTGAT 58.820 50.000 11.37 0.00 0.00 2.57
4718 8725 0.895100 GGCATGCTTGGACTGGTTGA 60.895 55.000 18.92 0.00 0.00 3.18
4719 8726 1.588082 GGCATGCTTGGACTGGTTG 59.412 57.895 18.92 0.00 0.00 3.77
4720 8727 1.973281 CGGCATGCTTGGACTGGTT 60.973 57.895 18.92 0.00 0.00 3.67
4721 8728 2.360350 CGGCATGCTTGGACTGGT 60.360 61.111 18.92 0.00 0.00 4.00
4722 8729 3.136123 CCGGCATGCTTGGACTGG 61.136 66.667 18.92 4.70 0.00 4.00
4723 8730 2.046023 TCCGGCATGCTTGGACTG 60.046 61.111 22.87 2.61 0.00 3.51
4724 8731 2.045926 GTCCGGCATGCTTGGACT 60.046 61.111 35.25 0.00 46.86 3.85
4726 8733 1.377202 GAAGTCCGGCATGCTTGGA 60.377 57.895 22.87 22.87 0.00 3.53
4727 8734 0.107703 TAGAAGTCCGGCATGCTTGG 60.108 55.000 18.92 19.30 0.00 3.61
4728 8735 1.959042 ATAGAAGTCCGGCATGCTTG 58.041 50.000 18.92 10.54 0.00 4.01
4729 8736 2.292267 CAATAGAAGTCCGGCATGCTT 58.708 47.619 18.92 2.78 0.00 3.91
4730 8737 1.475751 CCAATAGAAGTCCGGCATGCT 60.476 52.381 18.92 0.00 0.00 3.79
4731 8738 0.947244 CCAATAGAAGTCCGGCATGC 59.053 55.000 9.90 9.90 0.00 4.06
4732 8739 0.947244 GCCAATAGAAGTCCGGCATG 59.053 55.000 0.00 0.00 42.50 4.06
4733 8740 0.179018 GGCCAATAGAAGTCCGGCAT 60.179 55.000 0.00 0.00 44.82 4.40
4734 8741 1.223487 GGCCAATAGAAGTCCGGCA 59.777 57.895 0.00 0.00 44.82 5.69
4735 8742 0.533085 GAGGCCAATAGAAGTCCGGC 60.533 60.000 5.01 0.00 42.21 6.13
4736 8743 1.123928 AGAGGCCAATAGAAGTCCGG 58.876 55.000 5.01 0.00 0.00 5.14
4737 8744 2.799917 CGAAGAGGCCAATAGAAGTCCG 60.800 54.545 5.01 0.00 0.00 4.79
4738 8745 2.431057 TCGAAGAGGCCAATAGAAGTCC 59.569 50.000 5.01 0.00 0.00 3.85
4739 8746 3.802948 TCGAAGAGGCCAATAGAAGTC 57.197 47.619 5.01 0.00 0.00 3.01
4740 8747 3.515901 AGTTCGAAGAGGCCAATAGAAGT 59.484 43.478 5.01 4.02 38.43 3.01
4741 8748 4.130286 AGTTCGAAGAGGCCAATAGAAG 57.870 45.455 5.01 0.00 38.43 2.85
4742 8749 4.099573 CCTAGTTCGAAGAGGCCAATAGAA 59.900 45.833 5.01 0.57 38.43 2.10
4743 8750 3.637229 CCTAGTTCGAAGAGGCCAATAGA 59.363 47.826 5.01 0.00 38.43 1.98
4744 8751 3.637229 TCCTAGTTCGAAGAGGCCAATAG 59.363 47.826 17.69 0.00 38.43 1.73
4745 8752 3.383825 GTCCTAGTTCGAAGAGGCCAATA 59.616 47.826 17.69 1.88 38.43 1.90
4746 8753 2.168728 GTCCTAGTTCGAAGAGGCCAAT 59.831 50.000 17.69 0.00 38.43 3.16
4747 8754 1.549170 GTCCTAGTTCGAAGAGGCCAA 59.451 52.381 17.69 2.49 38.43 4.52
4748 8755 1.183549 GTCCTAGTTCGAAGAGGCCA 58.816 55.000 17.69 3.10 38.43 5.36
4749 8756 1.183549 TGTCCTAGTTCGAAGAGGCC 58.816 55.000 17.69 9.87 38.43 5.19
4750 8757 2.166664 ACATGTCCTAGTTCGAAGAGGC 59.833 50.000 17.69 13.88 38.43 4.70
4751 8758 4.641094 AGTACATGTCCTAGTTCGAAGAGG 59.359 45.833 16.74 16.74 38.43 3.69
4752 8759 5.821516 AGTACATGTCCTAGTTCGAAGAG 57.178 43.478 0.00 0.00 38.43 2.85
4753 8760 6.647229 TCTAGTACATGTCCTAGTTCGAAGA 58.353 40.000 21.01 3.56 33.81 2.87
4754 8761 6.922247 TCTAGTACATGTCCTAGTTCGAAG 57.078 41.667 21.01 1.35 33.81 3.79
4755 8762 7.876936 AATCTAGTACATGTCCTAGTTCGAA 57.123 36.000 21.01 5.96 33.81 3.71
4756 8763 8.427276 TCTAATCTAGTACATGTCCTAGTTCGA 58.573 37.037 21.01 14.08 33.81 3.71
4757 8764 8.604640 TCTAATCTAGTACATGTCCTAGTTCG 57.395 38.462 21.01 12.56 33.81 3.95
4785 8792 3.878778 ACCCTAGTTAGCAGCAGATTTG 58.121 45.455 0.00 0.00 0.00 2.32
4810 8817 6.294473 CAGCAGATTGGTATCTAATCCAGTT 58.706 40.000 3.02 0.00 39.11 3.16
4851 8862 3.133721 CAGAAGTCTAGCAATGCCCTAGT 59.866 47.826 0.00 0.00 35.07 2.57
4855 8866 1.020437 GCAGAAGTCTAGCAATGCCC 58.980 55.000 0.00 0.00 0.00 5.36
4924 8938 6.828788 TGTTATGTGGGTTACTTGTAACAGA 58.171 36.000 20.70 7.56 32.64 3.41
5168 9207 3.457610 ACCTTGAAACATTGTTGCCTG 57.542 42.857 2.13 0.00 0.00 4.85
5345 9385 3.492313 CCGCTGTTCTAAAATGTTCAGC 58.508 45.455 0.00 0.00 42.90 4.26
5351 9391 2.095969 TCAACGCCGCTGTTCTAAAATG 60.096 45.455 0.00 0.00 0.00 2.32
5394 9434 2.679837 CACGATGGAATGGAAGACAAGG 59.320 50.000 0.00 0.00 0.00 3.61
5396 9436 3.694043 TCACGATGGAATGGAAGACAA 57.306 42.857 0.00 0.00 0.00 3.18
5398 9438 3.557595 GTCATCACGATGGAATGGAAGAC 59.442 47.826 7.17 0.00 39.24 3.01
5399 9439 3.197549 TGTCATCACGATGGAATGGAAGA 59.802 43.478 7.17 0.00 39.24 2.87
5400 9440 3.534554 TGTCATCACGATGGAATGGAAG 58.465 45.455 7.17 0.00 39.24 3.46
5401 9441 3.625649 TGTCATCACGATGGAATGGAA 57.374 42.857 7.17 0.00 39.24 3.53
5402 9442 3.625649 TTGTCATCACGATGGAATGGA 57.374 42.857 7.17 0.00 39.24 3.41
5403 9443 4.336153 TCAATTGTCATCACGATGGAATGG 59.664 41.667 5.13 4.55 39.24 3.16
5413 9457 7.220030 ACCAGACCTATATCAATTGTCATCAC 58.780 38.462 5.13 0.00 0.00 3.06
5456 9505 7.718272 AATTAAACGTGCTGAAACTACTGTA 57.282 32.000 0.00 0.00 0.00 2.74
5573 9626 4.846137 GTGTTCAACTTGACATATTGCGAC 59.154 41.667 0.00 0.00 0.00 5.19
5622 9676 5.590530 ACAAACTTTCAACTTGGCATACA 57.409 34.783 0.00 0.00 0.00 2.29
5751 9805 1.299976 GGCCACCGAAGATCCAACT 59.700 57.895 0.00 0.00 0.00 3.16
5853 9907 1.537202 GAACTGGCGCATCACTTCTTT 59.463 47.619 10.83 0.00 0.00 2.52
5870 9924 1.845809 CTGACTGGTTGCAGCCGAAC 61.846 60.000 15.43 8.69 0.00 3.95
5907 9969 5.008019 CCAACAAGATCGTTTCCTCCATATG 59.992 44.000 0.00 0.00 0.00 1.78
6016 10080 2.029649 AGCACTGCAGCTTACAAATTGG 60.030 45.455 15.27 0.00 43.70 3.16
6060 10124 4.927425 AGCACGCTAGAAAAACGATAAGAA 59.073 37.500 0.00 0.00 0.00 2.52
6084 10148 2.096218 GTCAGTTAAGCTTTGACGCTGG 60.096 50.000 12.67 3.42 40.79 4.85
6102 10166 0.764271 TCACATCCAGCAACAGGTCA 59.236 50.000 0.00 0.00 0.00 4.02
6103 10167 2.119801 ATCACATCCAGCAACAGGTC 57.880 50.000 0.00 0.00 0.00 3.85
6106 10170 2.555325 ACACAATCACATCCAGCAACAG 59.445 45.455 0.00 0.00 0.00 3.16
6107 10171 2.585330 ACACAATCACATCCAGCAACA 58.415 42.857 0.00 0.00 0.00 3.33
6108 10172 3.648339 AACACAATCACATCCAGCAAC 57.352 42.857 0.00 0.00 0.00 4.17
6118 10182 9.856488 TCTAGAGAAACAGTATAACACAATCAC 57.144 33.333 0.00 0.00 0.00 3.06
6204 10268 1.000163 CACCGTCATCTCTTATCCCCG 60.000 57.143 0.00 0.00 0.00 5.73
6210 10274 3.069586 CCAATAGGCACCGTCATCTCTTA 59.930 47.826 0.00 0.00 0.00 2.10
6214 10278 0.469917 CCCAATAGGCACCGTCATCT 59.530 55.000 0.00 0.00 0.00 2.90
6221 10285 2.979678 TCTCTTATCCCCAATAGGCACC 59.020 50.000 0.00 0.00 0.00 5.01
6222 10286 4.287067 TCATCTCTTATCCCCAATAGGCAC 59.713 45.833 0.00 0.00 0.00 5.01
6223 10287 4.287067 GTCATCTCTTATCCCCAATAGGCA 59.713 45.833 0.00 0.00 0.00 4.75
6224 10288 4.621747 CGTCATCTCTTATCCCCAATAGGC 60.622 50.000 0.00 0.00 0.00 3.93
6225 10289 4.772624 TCGTCATCTCTTATCCCCAATAGG 59.227 45.833 0.00 0.00 0.00 2.57
6226 10290 5.984695 TCGTCATCTCTTATCCCCAATAG 57.015 43.478 0.00 0.00 0.00 1.73
6227 10291 6.016555 TCATCGTCATCTCTTATCCCCAATA 58.983 40.000 0.00 0.00 0.00 1.90
6228 10292 4.840680 TCATCGTCATCTCTTATCCCCAAT 59.159 41.667 0.00 0.00 0.00 3.16
6229 10293 4.039245 GTCATCGTCATCTCTTATCCCCAA 59.961 45.833 0.00 0.00 0.00 4.12
6230 10294 3.574396 GTCATCGTCATCTCTTATCCCCA 59.426 47.826 0.00 0.00 0.00 4.96
6231 10295 3.366476 CGTCATCGTCATCTCTTATCCCC 60.366 52.174 0.00 0.00 0.00 4.81
6232 10296 3.827625 CGTCATCGTCATCTCTTATCCC 58.172 50.000 0.00 0.00 0.00 3.85
6233 10297 3.238441 GCGTCATCGTCATCTCTTATCC 58.762 50.000 0.00 0.00 39.49 2.59
6234 10298 2.905546 CGCGTCATCGTCATCTCTTATC 59.094 50.000 0.00 0.00 39.49 1.75
6235 10299 2.548480 TCGCGTCATCGTCATCTCTTAT 59.452 45.455 5.77 0.00 39.49 1.73
6236 10300 1.937899 TCGCGTCATCGTCATCTCTTA 59.062 47.619 5.77 0.00 39.49 2.10
6237 10301 0.733150 TCGCGTCATCGTCATCTCTT 59.267 50.000 5.77 0.00 39.49 2.85
6238 10302 0.306228 CTCGCGTCATCGTCATCTCT 59.694 55.000 5.77 0.00 39.49 3.10
6239 10303 0.305009 TCTCGCGTCATCGTCATCTC 59.695 55.000 5.77 0.00 39.49 2.75
6240 10304 0.306228 CTCTCGCGTCATCGTCATCT 59.694 55.000 5.77 0.00 39.49 2.90
6241 10305 0.028242 ACTCTCGCGTCATCGTCATC 59.972 55.000 5.77 0.00 39.49 2.92
6242 10306 0.248255 CACTCTCGCGTCATCGTCAT 60.248 55.000 5.77 0.00 39.49 3.06
6243 10307 1.134694 CACTCTCGCGTCATCGTCA 59.865 57.895 5.77 0.00 39.49 4.35
6244 10308 2.218239 GCACTCTCGCGTCATCGTC 61.218 63.158 5.77 0.00 39.49 4.20
6245 10309 2.202492 GCACTCTCGCGTCATCGT 60.202 61.111 5.77 0.00 39.49 3.73
6246 10310 1.535636 GATGCACTCTCGCGTCATCG 61.536 60.000 5.77 0.00 45.47 3.84
6252 10316 0.644331 CTCAAAGATGCACTCTCGCG 59.356 55.000 0.00 0.00 31.03 5.87
6271 10335 1.301293 CTCAACCAAGAGGGCCTCC 59.699 63.158 29.62 12.20 42.05 4.30
6294 10358 2.783135 GGCACATACATGATACCCCAG 58.217 52.381 0.00 0.00 0.00 4.45
6318 10383 0.031449 AAAACCATCACAAACCGCCG 59.969 50.000 0.00 0.00 0.00 6.46
6324 10389 3.571590 ACCAGGCTAAAACCATCACAAA 58.428 40.909 0.00 0.00 0.00 2.83
6340 10405 5.476945 ACCAGCTAACTAATGAAAAACCAGG 59.523 40.000 0.00 0.00 0.00 4.45
6359 10424 2.829741 ACAGAAGAGAGTTGACCAGC 57.170 50.000 0.00 0.00 0.00 4.85
6404 10471 7.215719 AGAAGTACAAATTTTAGAGGTTGGC 57.784 36.000 0.00 0.00 0.00 4.52
6405 10472 9.067986 AGAAGAAGTACAAATTTTAGAGGTTGG 57.932 33.333 0.00 0.00 0.00 3.77
6407 10474 9.628500 ACAGAAGAAGTACAAATTTTAGAGGTT 57.372 29.630 0.00 0.00 0.00 3.50
6408 10475 9.274206 GACAGAAGAAGTACAAATTTTAGAGGT 57.726 33.333 0.00 0.00 0.00 3.85
6411 10478 8.145767 TCGGACAGAAGAAGTACAAATTTTAGA 58.854 33.333 0.00 0.00 0.00 2.10
6412 10479 8.306680 TCGGACAGAAGAAGTACAAATTTTAG 57.693 34.615 0.00 0.00 0.00 1.85
6413 10480 8.665643 TTCGGACAGAAGAAGTACAAATTTTA 57.334 30.769 0.00 0.00 34.26 1.52
6414 10481 7.562454 TTCGGACAGAAGAAGTACAAATTTT 57.438 32.000 0.00 0.00 34.26 1.82
6418 10485 6.988622 TTTTTCGGACAGAAGAAGTACAAA 57.011 33.333 0.00 0.00 40.40 2.83
6439 10506 9.643693 GATACATCCATTTGAATGACAAGTTTT 57.356 29.630 5.32 0.00 39.77 2.43
6440 10507 9.028284 AGATACATCCATTTGAATGACAAGTTT 57.972 29.630 5.32 0.00 39.77 2.66
6441 10508 8.585471 AGATACATCCATTTGAATGACAAGTT 57.415 30.769 5.32 0.00 39.77 2.66
6442 10509 9.334947 CTAGATACATCCATTTGAATGACAAGT 57.665 33.333 5.32 2.06 39.77 3.16
6443 10510 8.288208 GCTAGATACATCCATTTGAATGACAAG 58.712 37.037 5.32 0.00 39.77 3.16
6444 10511 7.774625 TGCTAGATACATCCATTTGAATGACAA 59.225 33.333 5.32 0.00 38.70 3.18
6445 10512 7.227314 GTGCTAGATACATCCATTTGAATGACA 59.773 37.037 5.32 0.00 38.70 3.58
6446 10513 7.308229 GGTGCTAGATACATCCATTTGAATGAC 60.308 40.741 5.32 0.00 38.70 3.06
6447 10514 6.712095 GGTGCTAGATACATCCATTTGAATGA 59.288 38.462 5.32 0.00 38.70 2.57
6448 10515 6.487668 TGGTGCTAGATACATCCATTTGAATG 59.512 38.462 0.00 0.00 36.17 2.67
6449 10516 6.604171 TGGTGCTAGATACATCCATTTGAAT 58.396 36.000 0.00 0.00 0.00 2.57
6450 10517 6.000246 TGGTGCTAGATACATCCATTTGAA 58.000 37.500 0.00 0.00 0.00 2.69
6451 10518 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
6452 10519 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
6453 10520 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
6454 10521 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
6455 10522 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
6456 10523 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
6457 10524 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
6469 10536 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
6470 10537 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
6471 10538 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
6472 10539 8.668510 AAATGGATGTATCTAGCACTAACTTG 57.331 34.615 0.00 0.00 0.00 3.16
6474 10541 9.988815 CTTAAATGGATGTATCTAGCACTAACT 57.011 33.333 0.00 0.00 0.00 2.24
6475 10542 9.982651 TCTTAAATGGATGTATCTAGCACTAAC 57.017 33.333 0.00 0.00 0.00 2.34
6488 10555 9.920946 TCCTAAGCTTATTTCTTAAATGGATGT 57.079 29.630 6.64 0.00 32.38 3.06
6490 10557 9.920946 TGTCCTAAGCTTATTTCTTAAATGGAT 57.079 29.630 6.64 0.00 32.38 3.41
6491 10558 9.747898 TTGTCCTAAGCTTATTTCTTAAATGGA 57.252 29.630 6.64 3.26 32.38 3.41
6493 10560 9.508567 GCTTGTCCTAAGCTTATTTCTTAAATG 57.491 33.333 6.64 0.00 40.01 2.32
6516 10583 2.039613 CTCCCTCTGTCCAAGAAAGCTT 59.960 50.000 0.00 0.00 33.37 3.74
6517 10584 1.627834 CTCCCTCTGTCCAAGAAAGCT 59.372 52.381 0.00 0.00 33.37 3.74
6518 10585 1.349357 ACTCCCTCTGTCCAAGAAAGC 59.651 52.381 0.00 0.00 33.37 3.51
6519 10586 4.090090 TCTACTCCCTCTGTCCAAGAAAG 58.910 47.826 0.00 0.00 33.37 2.62
6520 10587 4.127918 TCTACTCCCTCTGTCCAAGAAA 57.872 45.455 0.00 0.00 33.37 2.52
6521 10588 3.827817 TCTACTCCCTCTGTCCAAGAA 57.172 47.619 0.00 0.00 33.37 2.52
6522 10589 3.827817 TTCTACTCCCTCTGTCCAAGA 57.172 47.619 0.00 0.00 0.00 3.02
6523 10590 4.528596 TCTTTTCTACTCCCTCTGTCCAAG 59.471 45.833 0.00 0.00 0.00 3.61
6524 10591 4.489737 TCTTTTCTACTCCCTCTGTCCAA 58.510 43.478 0.00 0.00 0.00 3.53
6525 10592 4.127918 TCTTTTCTACTCCCTCTGTCCA 57.872 45.455 0.00 0.00 0.00 4.02
6526 10593 4.141824 CCATCTTTTCTACTCCCTCTGTCC 60.142 50.000 0.00 0.00 0.00 4.02
6527 10594 4.712337 TCCATCTTTTCTACTCCCTCTGTC 59.288 45.833 0.00 0.00 0.00 3.51
6528 10595 4.689062 TCCATCTTTTCTACTCCCTCTGT 58.311 43.478 0.00 0.00 0.00 3.41
6529 10596 4.959210 TCTCCATCTTTTCTACTCCCTCTG 59.041 45.833 0.00 0.00 0.00 3.35
6530 10597 5.213868 TCTCCATCTTTTCTACTCCCTCT 57.786 43.478 0.00 0.00 0.00 3.69
6531 10598 5.011635 GGATCTCCATCTTTTCTACTCCCTC 59.988 48.000 0.00 0.00 35.64 4.30
6532 10599 4.904853 GGATCTCCATCTTTTCTACTCCCT 59.095 45.833 0.00 0.00 35.64 4.20
6533 10600 4.041075 GGGATCTCCATCTTTTCTACTCCC 59.959 50.000 0.00 0.00 37.91 4.30
6534 10601 4.904853 AGGGATCTCCATCTTTTCTACTCC 59.095 45.833 0.00 0.00 38.24 3.85
6535 10602 5.278758 CGAGGGATCTCCATCTTTTCTACTC 60.279 48.000 9.04 0.00 44.12 2.59
6536 10603 4.586841 CGAGGGATCTCCATCTTTTCTACT 59.413 45.833 9.04 0.00 44.12 2.57
6537 10604 4.342665 ACGAGGGATCTCCATCTTTTCTAC 59.657 45.833 9.04 0.00 44.12 2.59
6538 10605 4.547671 ACGAGGGATCTCCATCTTTTCTA 58.452 43.478 9.04 0.00 44.12 2.10
6547 10614 1.152943 CGAGGACGAGGGATCTCCA 60.153 63.158 0.00 0.00 42.66 3.86
6574 10641 1.362932 ACAGTGGTAGATCCCAGAGGT 59.637 52.381 0.00 0.00 34.43 3.85
6637 10704 5.938322 TCTTTTGTCAAAATCATAGCGTCC 58.062 37.500 11.09 0.00 0.00 4.79
6644 10711 6.703319 TGGCATCATCTTTTGTCAAAATCAT 58.297 32.000 11.09 4.38 0.00 2.45
6674 10741 0.929824 CTGTGTTTGCCTTTGACGCG 60.930 55.000 3.53 3.53 0.00 6.01
6744 10817 0.325110 TTCCCCAGAGCCAGAGAGAG 60.325 60.000 0.00 0.00 0.00 3.20
6745 10818 0.325110 CTTCCCCAGAGCCAGAGAGA 60.325 60.000 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.