Multiple sequence alignment - TraesCS6A01G249300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G249300 chr6A 100.000 3355 0 0 1 3355 462224749 462228103 0.000000e+00 6196.0
1 TraesCS6A01G249300 chr6A 76.375 1236 199 53 1100 2293 461987718 461986534 2.240000e-161 579.0
2 TraesCS6A01G249300 chr6A 90.881 329 27 3 2998 3325 474329069 474328743 3.970000e-119 438.0
3 TraesCS6A01G249300 chr6B 92.029 2346 103 34 698 3001 498544477 498542174 0.000000e+00 3219.0
4 TraesCS6A01G249300 chr6B 98.571 280 4 0 1 280 643500591 643500870 2.330000e-136 496.0
5 TraesCS6A01G249300 chr6B 98.214 280 5 0 1 280 44242127 44242406 1.080000e-134 490.0
6 TraesCS6A01G249300 chr6B 79.913 687 104 22 1620 2286 498852226 498852898 1.090000e-129 473.0
7 TraesCS6A01G249300 chr6B 74.338 491 85 16 1100 1577 498851680 498852142 1.600000e-38 171.0
8 TraesCS6A01G249300 chr6B 92.241 116 8 1 559 674 498552057 498551943 2.680000e-36 163.0
9 TraesCS6A01G249300 chr6B 91.262 103 8 1 389 491 498552618 498552517 4.510000e-29 139.0
10 TraesCS6A01G249300 chr6D 92.206 2117 96 27 559 2635 324782582 324784669 0.000000e+00 2931.0
11 TraesCS6A01G249300 chr6D 76.504 1230 206 46 1100 2293 324599424 324598242 8.010000e-166 593.0
12 TraesCS6A01G249300 chr6D 88.831 385 33 6 2623 3001 324784993 324785373 6.560000e-127 464.0
13 TraesCS6A01G249300 chr6D 88.293 205 11 7 303 495 324781941 324782144 2.010000e-57 233.0
14 TraesCS6A01G249300 chr6D 87.719 57 7 0 506 562 324782223 324782279 2.160000e-07 67.6
15 TraesCS6A01G249300 chr3D 89.177 1506 112 19 967 2451 580521643 580523118 0.000000e+00 1831.0
16 TraesCS6A01G249300 chr3D 91.131 327 26 3 2998 3323 210410145 210410469 1.100000e-119 440.0
17 TraesCS6A01G249300 chr3D 81.056 322 29 16 2643 2956 580523311 580523608 9.360000e-56 228.0
18 TraesCS6A01G249300 chr3A 88.467 1500 119 23 967 2443 715973647 715975115 0.000000e+00 1762.0
19 TraesCS6A01G249300 chr3A 98.577 281 4 0 1 281 16278507 16278787 6.460000e-137 497.0
20 TraesCS6A01G249300 chr3A 80.460 348 33 19 2643 2979 715975332 715975655 2.010000e-57 233.0
21 TraesCS6A01G249300 chr3B 87.743 1542 126 32 967 2473 775735414 775736927 0.000000e+00 1742.0
22 TraesCS6A01G249300 chr3B 91.358 324 26 2 3001 3323 333447924 333447602 3.070000e-120 442.0
23 TraesCS6A01G249300 chr5A 98.221 281 5 0 1 281 646896569 646896849 3.010000e-135 492.0
24 TraesCS6A01G249300 chr5A 97.880 283 6 0 1 283 708712781 708712499 1.080000e-134 490.0
25 TraesCS6A01G249300 chr5A 91.667 324 24 3 3001 3323 374886160 374885839 2.370000e-121 446.0
26 TraesCS6A01G249300 chr4A 98.561 278 4 0 1 278 703419981 703419704 3.010000e-135 492.0
27 TraesCS6A01G249300 chr4A 97.213 287 8 0 1 287 604658358 604658644 1.400000e-133 486.0
28 TraesCS6A01G249300 chr7B 97.857 280 6 0 1 280 25644418 25644139 5.030000e-133 484.0
29 TraesCS6A01G249300 chr7B 92.284 324 21 4 3001 3323 435675634 435675954 1.100000e-124 457.0
30 TraesCS6A01G249300 chr1A 97.857 280 6 0 1 280 41152382 41152103 5.030000e-133 484.0
31 TraesCS6A01G249300 chr4B 92.260 323 22 3 3001 3322 363317875 363317555 3.950000e-124 455.0
32 TraesCS6A01G249300 chr4B 91.667 324 24 3 3001 3323 396519606 396519927 2.370000e-121 446.0
33 TraesCS6A01G249300 chr4B 91.641 323 25 2 3001 3323 621034751 621035071 2.370000e-121 446.0
34 TraesCS6A01G249300 chr5B 91.385 325 26 2 3001 3324 283986388 283986065 8.540000e-121 444.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G249300 chr6A 462224749 462228103 3354 False 6196.0 6196 100.00000 1 3355 1 chr6A.!!$F1 3354
1 TraesCS6A01G249300 chr6A 461986534 461987718 1184 True 579.0 579 76.37500 1100 2293 1 chr6A.!!$R1 1193
2 TraesCS6A01G249300 chr6B 498542174 498544477 2303 True 3219.0 3219 92.02900 698 3001 1 chr6B.!!$R1 2303
3 TraesCS6A01G249300 chr6B 498851680 498852898 1218 False 322.0 473 77.12550 1100 2286 2 chr6B.!!$F3 1186
4 TraesCS6A01G249300 chr6D 324781941 324785373 3432 False 923.9 2931 89.26225 303 3001 4 chr6D.!!$F1 2698
5 TraesCS6A01G249300 chr6D 324598242 324599424 1182 True 593.0 593 76.50400 1100 2293 1 chr6D.!!$R1 1193
6 TraesCS6A01G249300 chr3D 580521643 580523608 1965 False 1029.5 1831 85.11650 967 2956 2 chr3D.!!$F2 1989
7 TraesCS6A01G249300 chr3A 715973647 715975655 2008 False 997.5 1762 84.46350 967 2979 2 chr3A.!!$F2 2012
8 TraesCS6A01G249300 chr3B 775735414 775736927 1513 False 1742.0 1742 87.74300 967 2473 1 chr3B.!!$F1 1506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.038526 CGGCCTAACTATGCCTACGG 60.039 60.0 0.00 0.0 45.71 4.02 F
215 216 0.306840 CGTAGCTCGAGTTATGCCGA 59.693 55.0 15.13 0.0 42.86 5.54 F
251 252 0.389948 CCGTCGGCATAGATAAGGCC 60.390 60.0 0.00 0.0 44.27 5.19 F
289 290 0.393820 TCCGGTAGTGGTGGTTTCAC 59.606 55.0 0.00 0.0 42.91 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1924 2502 0.107945 GGAACGCCAAGATCAGCTCT 60.108 55.0 0.00 0.0 34.96 4.09 R
1925 2503 0.107945 AGGAACGCCAAGATCAGCTC 60.108 55.0 0.00 0.0 36.29 4.09 R
2324 2913 5.446741 GCACATTCTTTCTTTTCGCGGTATA 60.447 40.0 6.13 0.0 0.00 1.47 R
2508 3106 0.169230 CAGTTCAGTCGTCTCCTCGG 59.831 60.0 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.397348 ATTTGACGGTGTCAGCCC 57.603 55.556 0.00 0.00 43.69 5.19
25 26 4.025401 GTGTCAGCCCGCCGTTTG 62.025 66.667 0.00 0.00 0.00 2.93
26 27 4.555709 TGTCAGCCCGCCGTTTGT 62.556 61.111 0.00 0.00 0.00 2.83
27 28 3.723348 GTCAGCCCGCCGTTTGTC 61.723 66.667 0.00 0.00 0.00 3.18
36 37 4.278513 CCGTTTGTCCCTGGGCCA 62.279 66.667 8.22 5.85 0.00 5.36
37 38 2.983592 CGTTTGTCCCTGGGCCAC 60.984 66.667 8.22 2.26 0.00 5.01
38 39 2.600470 GTTTGTCCCTGGGCCACC 60.600 66.667 8.22 0.00 37.24 4.61
39 40 3.106609 TTTGTCCCTGGGCCACCA 61.107 61.111 8.22 0.00 46.94 4.17
51 52 3.739922 CCACCAGGGCCACATCTA 58.260 61.111 6.18 0.00 0.00 1.98
52 53 2.234586 CCACCAGGGCCACATCTAT 58.765 57.895 6.18 0.00 0.00 1.98
53 54 0.179009 CCACCAGGGCCACATCTATG 60.179 60.000 6.18 0.00 0.00 2.23
54 55 0.820891 CACCAGGGCCACATCTATGC 60.821 60.000 6.18 0.00 0.00 3.14
55 56 1.228367 CCAGGGCCACATCTATGCC 60.228 63.158 6.18 0.00 44.59 4.40
56 57 1.598962 CAGGGCCACATCTATGCCG 60.599 63.158 6.18 0.00 46.31 5.69
57 58 1.766059 AGGGCCACATCTATGCCGA 60.766 57.895 6.18 0.00 46.31 5.54
58 59 1.598130 GGGCCACATCTATGCCGAC 60.598 63.158 4.39 0.00 46.31 4.79
59 60 1.146041 GGCCACATCTATGCCGACA 59.854 57.895 0.00 0.00 35.08 4.35
60 61 0.882042 GGCCACATCTATGCCGACAG 60.882 60.000 0.00 0.00 35.08 3.51
61 62 1.502163 GCCACATCTATGCCGACAGC 61.502 60.000 0.00 0.00 44.14 4.40
62 63 0.882042 CCACATCTATGCCGACAGCC 60.882 60.000 0.00 0.00 42.71 4.85
63 64 0.105593 CACATCTATGCCGACAGCCT 59.894 55.000 0.00 0.00 42.71 4.58
64 65 1.341209 CACATCTATGCCGACAGCCTA 59.659 52.381 0.00 0.00 42.71 3.93
65 66 2.039418 ACATCTATGCCGACAGCCTAA 58.961 47.619 0.00 0.00 42.71 2.69
66 67 2.224066 ACATCTATGCCGACAGCCTAAC 60.224 50.000 0.00 0.00 42.71 2.34
67 68 1.776662 TCTATGCCGACAGCCTAACT 58.223 50.000 0.00 0.00 42.71 2.24
68 69 2.940158 TCTATGCCGACAGCCTAACTA 58.060 47.619 0.00 0.00 42.71 2.24
69 70 3.497332 TCTATGCCGACAGCCTAACTAT 58.503 45.455 0.00 0.00 42.71 2.12
70 71 2.533266 ATGCCGACAGCCTAACTATG 57.467 50.000 0.00 0.00 42.71 2.23
71 72 0.179084 TGCCGACAGCCTAACTATGC 60.179 55.000 0.00 0.00 42.71 3.14
72 73 0.880718 GCCGACAGCCTAACTATGCC 60.881 60.000 0.00 0.00 34.35 4.40
73 74 0.753262 CCGACAGCCTAACTATGCCT 59.247 55.000 0.00 0.00 0.00 4.75
74 75 1.961394 CCGACAGCCTAACTATGCCTA 59.039 52.381 0.00 0.00 0.00 3.93
75 76 2.288273 CCGACAGCCTAACTATGCCTAC 60.288 54.545 0.00 0.00 0.00 3.18
76 77 2.604855 CGACAGCCTAACTATGCCTACG 60.605 54.545 0.00 0.00 0.00 3.51
77 78 1.687123 ACAGCCTAACTATGCCTACGG 59.313 52.381 0.00 0.00 0.00 4.02
109 110 3.908978 GCATAGATCGATATATGCCGACG 59.091 47.826 37.54 17.20 46.67 5.12
110 111 4.467735 CATAGATCGATATATGCCGACGG 58.532 47.826 23.01 10.29 37.64 4.79
120 121 4.338327 GCCGACGGCCTAACTATG 57.662 61.111 28.74 0.00 44.06 2.23
121 122 1.954651 GCCGACGGCCTAACTATGC 60.955 63.158 28.74 0.00 44.06 3.14
122 123 1.300697 CCGACGGCCTAACTATGCC 60.301 63.158 0.00 0.00 44.41 4.40
123 124 1.740285 CGACGGCCTAACTATGCCT 59.260 57.895 0.00 0.00 45.71 4.75
124 125 0.956633 CGACGGCCTAACTATGCCTA 59.043 55.000 0.00 0.00 45.71 3.93
125 126 1.335689 CGACGGCCTAACTATGCCTAC 60.336 57.143 0.00 0.00 45.71 3.18
126 127 0.672342 ACGGCCTAACTATGCCTACG 59.328 55.000 0.00 0.00 45.71 3.51
127 128 0.038526 CGGCCTAACTATGCCTACGG 60.039 60.000 0.00 0.00 45.71 4.02
150 151 1.633774 CCGTAGGCATAGATGGAGGT 58.366 55.000 0.00 0.00 46.14 3.85
151 152 2.803956 CCGTAGGCATAGATGGAGGTA 58.196 52.381 0.00 0.00 46.14 3.08
152 153 3.366396 CCGTAGGCATAGATGGAGGTAT 58.634 50.000 0.00 0.00 46.14 2.73
153 154 3.131223 CCGTAGGCATAGATGGAGGTATG 59.869 52.174 0.00 0.00 46.14 2.39
154 155 6.471800 CCGTAGGCATAGATGGAGGTATGC 62.472 54.167 5.88 5.88 46.14 3.14
156 157 2.015736 GCATAGATGGAGGTATGCCG 57.984 55.000 3.42 0.00 43.86 5.69
157 158 1.550524 GCATAGATGGAGGTATGCCGA 59.449 52.381 3.42 0.00 43.86 5.54
158 159 2.675317 GCATAGATGGAGGTATGCCGAC 60.675 54.545 3.42 0.00 43.86 4.79
159 160 1.244816 TAGATGGAGGTATGCCGACG 58.755 55.000 0.00 0.00 40.50 5.12
160 161 1.006102 GATGGAGGTATGCCGACGG 60.006 63.158 10.29 10.29 40.50 4.79
170 171 4.327885 GCCGACGGCTTCTCTATG 57.672 61.111 31.30 0.00 46.69 2.23
171 172 1.951631 GCCGACGGCTTCTCTATGC 60.952 63.158 31.30 0.14 46.69 3.14
172 173 1.300233 CCGACGGCTTCTCTATGCC 60.300 63.158 0.00 0.00 45.25 4.40
176 177 4.327885 GGCTTCTCTATGCCGACG 57.672 61.111 0.00 0.00 39.71 5.12
177 178 1.300233 GGCTTCTCTATGCCGACGG 60.300 63.158 10.29 10.29 39.71 4.79
187 188 3.431725 GCCGACGGCTTTTCCCAG 61.432 66.667 31.30 0.00 46.69 4.45
188 189 2.746277 CCGACGGCTTTTCCCAGG 60.746 66.667 0.00 0.00 0.00 4.45
189 190 3.431725 CGACGGCTTTTCCCAGGC 61.432 66.667 0.00 0.00 35.98 4.85
190 191 3.062466 GACGGCTTTTCCCAGGCC 61.062 66.667 0.00 0.00 42.18 5.19
193 194 2.600470 GGCTTTTCCCAGGCCGTT 60.600 61.111 0.00 0.00 36.37 4.44
194 195 2.207229 GGCTTTTCCCAGGCCGTTT 61.207 57.895 0.00 0.00 36.37 3.60
195 196 1.006220 GCTTTTCCCAGGCCGTTTG 60.006 57.895 0.00 0.00 0.00 2.93
196 197 1.006220 CTTTTCCCAGGCCGTTTGC 60.006 57.895 0.00 0.00 40.16 3.68
197 198 2.747507 CTTTTCCCAGGCCGTTTGCG 62.748 60.000 0.00 0.00 42.61 4.85
198 199 4.572571 TTCCCAGGCCGTTTGCGT 62.573 61.111 0.00 0.00 42.61 5.24
199 200 2.677765 TTTCCCAGGCCGTTTGCGTA 62.678 55.000 0.00 0.00 42.61 4.42
200 201 3.124921 CCCAGGCCGTTTGCGTAG 61.125 66.667 0.00 0.00 42.61 3.51
214 215 2.784712 CGTAGCTCGAGTTATGCCG 58.215 57.895 15.13 8.71 42.86 5.69
215 216 0.306840 CGTAGCTCGAGTTATGCCGA 59.693 55.000 15.13 0.00 42.86 5.54
216 217 1.756367 GTAGCTCGAGTTATGCCGAC 58.244 55.000 15.13 0.00 0.00 4.79
217 218 0.306840 TAGCTCGAGTTATGCCGACG 59.693 55.000 15.13 0.00 0.00 5.12
218 219 1.944676 GCTCGAGTTATGCCGACGG 60.945 63.158 15.13 10.29 0.00 4.79
229 230 4.992511 CCGACGGCCCCGACAAAA 62.993 66.667 14.44 0.00 42.83 2.44
230 231 2.973600 CGACGGCCCCGACAAAAA 60.974 61.111 14.44 0.00 42.83 1.94
231 232 2.951458 GACGGCCCCGACAAAAAG 59.049 61.111 14.44 0.00 42.83 2.27
232 233 3.263503 GACGGCCCCGACAAAAAGC 62.264 63.158 14.44 0.00 42.83 3.51
233 234 4.050934 CGGCCCCGACAAAAAGCC 62.051 66.667 0.00 0.00 42.83 4.35
234 235 4.050934 GGCCCCGACAAAAAGCCG 62.051 66.667 0.00 0.00 33.18 5.52
235 236 3.292159 GCCCCGACAAAAAGCCGT 61.292 61.111 0.00 0.00 0.00 5.68
236 237 2.951458 CCCCGACAAAAAGCCGTC 59.049 61.111 0.00 0.00 0.00 4.79
250 251 3.123674 CCGTCGGCATAGATAAGGC 57.876 57.895 0.00 0.00 0.00 4.35
251 252 0.389948 CCGTCGGCATAGATAAGGCC 60.390 60.000 0.00 0.00 44.27 5.19
272 273 5.019785 CCGTAGGCATATAGGGTTATTCC 57.980 47.826 0.00 0.00 46.14 3.01
273 274 4.441079 CCGTAGGCATATAGGGTTATTCCG 60.441 50.000 0.00 0.00 46.14 4.30
274 275 4.441079 CGTAGGCATATAGGGTTATTCCGG 60.441 50.000 0.00 0.00 37.00 5.14
275 276 3.527937 AGGCATATAGGGTTATTCCGGT 58.472 45.455 0.00 0.00 37.00 5.28
276 277 4.691238 AGGCATATAGGGTTATTCCGGTA 58.309 43.478 0.00 0.00 37.00 4.02
277 278 4.715297 AGGCATATAGGGTTATTCCGGTAG 59.285 45.833 0.00 0.00 37.00 3.18
278 279 4.468868 GGCATATAGGGTTATTCCGGTAGT 59.531 45.833 0.00 0.00 37.00 2.73
279 280 5.416947 GCATATAGGGTTATTCCGGTAGTG 58.583 45.833 0.00 0.00 37.00 2.74
280 281 5.626116 GCATATAGGGTTATTCCGGTAGTGG 60.626 48.000 0.00 0.00 37.00 4.00
281 282 2.259014 AGGGTTATTCCGGTAGTGGT 57.741 50.000 0.00 0.00 37.00 4.16
282 283 1.835531 AGGGTTATTCCGGTAGTGGTG 59.164 52.381 0.00 0.00 37.00 4.17
283 284 1.134310 GGGTTATTCCGGTAGTGGTGG 60.134 57.143 0.00 0.00 37.00 4.61
284 285 1.556451 GGTTATTCCGGTAGTGGTGGT 59.444 52.381 0.00 0.00 0.00 4.16
285 286 2.026915 GGTTATTCCGGTAGTGGTGGTT 60.027 50.000 0.00 0.00 0.00 3.67
286 287 3.559811 GGTTATTCCGGTAGTGGTGGTTT 60.560 47.826 0.00 0.00 0.00 3.27
287 288 2.484742 ATTCCGGTAGTGGTGGTTTC 57.515 50.000 0.00 0.00 0.00 2.78
288 289 1.129917 TTCCGGTAGTGGTGGTTTCA 58.870 50.000 0.00 0.00 0.00 2.69
289 290 0.393820 TCCGGTAGTGGTGGTTTCAC 59.606 55.000 0.00 0.00 42.91 3.18
290 291 0.395312 CCGGTAGTGGTGGTTTCACT 59.605 55.000 0.00 0.00 46.02 3.41
291 292 1.202722 CCGGTAGTGGTGGTTTCACTT 60.203 52.381 0.00 0.00 42.17 3.16
292 293 1.871039 CGGTAGTGGTGGTTTCACTTG 59.129 52.381 1.99 0.00 42.17 3.16
293 294 1.607148 GGTAGTGGTGGTTTCACTTGC 59.393 52.381 1.99 0.00 42.17 4.01
294 295 2.572290 GTAGTGGTGGTTTCACTTGCT 58.428 47.619 1.99 0.00 42.17 3.91
295 296 2.143876 AGTGGTGGTTTCACTTGCTT 57.856 45.000 0.00 0.00 42.17 3.91
296 297 2.024414 AGTGGTGGTTTCACTTGCTTC 58.976 47.619 0.00 0.00 42.17 3.86
297 298 1.021202 TGGTGGTTTCACTTGCTTCG 58.979 50.000 0.00 0.00 43.17 3.79
298 299 1.021968 GGTGGTTTCACTTGCTTCGT 58.978 50.000 0.00 0.00 43.17 3.85
299 300 2.215196 GGTGGTTTCACTTGCTTCGTA 58.785 47.619 0.00 0.00 43.17 3.43
300 301 2.223377 GGTGGTTTCACTTGCTTCGTAG 59.777 50.000 0.00 0.00 43.17 3.51
301 302 2.223377 GTGGTTTCACTTGCTTCGTAGG 59.777 50.000 0.00 0.00 40.58 3.18
334 335 9.159254 TGTATTAACTTATCATGTGAGGAGGAT 57.841 33.333 0.00 0.00 0.00 3.24
354 355 3.451141 TGTGTTTCATTGGAAGTTGCC 57.549 42.857 0.00 0.00 33.82 4.52
355 356 2.223688 TGTGTTTCATTGGAAGTTGCCG 60.224 45.455 0.00 0.00 33.82 5.69
495 508 5.779771 AGATGGGTGGTATCAACAAACAATT 59.220 36.000 0.00 0.00 30.63 2.32
496 509 6.951198 AGATGGGTGGTATCAACAAACAATTA 59.049 34.615 0.00 0.00 30.63 1.40
497 510 6.978674 TGGGTGGTATCAACAAACAATTAA 57.021 33.333 0.00 0.00 30.63 1.40
499 512 7.382110 TGGGTGGTATCAACAAACAATTAATG 58.618 34.615 0.00 0.00 30.63 1.90
500 513 7.233553 TGGGTGGTATCAACAAACAATTAATGA 59.766 33.333 0.00 0.00 30.63 2.57
501 514 8.091449 GGGTGGTATCAACAAACAATTAATGAA 58.909 33.333 0.00 0.00 30.63 2.57
502 515 9.482627 GGTGGTATCAACAAACAATTAATGAAA 57.517 29.630 0.00 0.00 0.00 2.69
504 517 9.186323 TGGTATCAACAAACAATTAATGAAACG 57.814 29.630 0.00 0.00 0.00 3.60
512 593 9.128107 ACAAACAATTAATGAAACGATAGCTTG 57.872 29.630 0.00 0.00 42.67 4.01
516 597 8.177663 ACAATTAATGAAACGATAGCTTGTCTG 58.822 33.333 0.00 0.00 42.67 3.51
520 601 7.667043 AATGAAACGATAGCTTGTCTGTTTA 57.333 32.000 14.90 8.98 42.67 2.01
549 630 7.775561 ACCCATCTTTGGTTTTCTACTCATATC 59.224 37.037 0.00 0.00 41.91 1.63
550 631 7.995488 CCCATCTTTGGTTTTCTACTCATATCT 59.005 37.037 0.00 0.00 41.91 1.98
623 1010 5.665459 ACTTCAGTATTGAGTGTCATAGCC 58.335 41.667 0.00 0.00 34.15 3.93
624 1011 5.187772 ACTTCAGTATTGAGTGTCATAGCCA 59.812 40.000 0.00 0.00 34.15 4.75
625 1012 5.011090 TCAGTATTGAGTGTCATAGCCAC 57.989 43.478 0.00 0.00 0.00 5.01
626 1013 4.122776 CAGTATTGAGTGTCATAGCCACC 58.877 47.826 0.00 0.00 33.20 4.61
627 1014 3.774766 AGTATTGAGTGTCATAGCCACCA 59.225 43.478 0.00 0.00 33.20 4.17
628 1015 2.472695 TTGAGTGTCATAGCCACCAC 57.527 50.000 0.00 0.00 33.20 4.16
629 1016 0.613260 TGAGTGTCATAGCCACCACC 59.387 55.000 0.00 0.00 33.20 4.61
630 1017 0.905357 GAGTGTCATAGCCACCACCT 59.095 55.000 0.00 0.00 33.20 4.00
631 1018 1.279271 GAGTGTCATAGCCACCACCTT 59.721 52.381 0.00 0.00 33.20 3.50
632 1019 1.705186 AGTGTCATAGCCACCACCTTT 59.295 47.619 0.00 0.00 33.20 3.11
633 1020 2.108250 AGTGTCATAGCCACCACCTTTT 59.892 45.455 0.00 0.00 33.20 2.27
634 1021 2.890945 GTGTCATAGCCACCACCTTTTT 59.109 45.455 0.00 0.00 0.00 1.94
635 1022 3.057526 GTGTCATAGCCACCACCTTTTTC 60.058 47.826 0.00 0.00 0.00 2.29
636 1023 3.181434 TGTCATAGCCACCACCTTTTTCT 60.181 43.478 0.00 0.00 0.00 2.52
637 1024 3.826729 GTCATAGCCACCACCTTTTTCTT 59.173 43.478 0.00 0.00 0.00 2.52
638 1025 5.007682 GTCATAGCCACCACCTTTTTCTTA 58.992 41.667 0.00 0.00 0.00 2.10
639 1026 5.123979 GTCATAGCCACCACCTTTTTCTTAG 59.876 44.000 0.00 0.00 0.00 2.18
640 1027 3.876309 AGCCACCACCTTTTTCTTAGA 57.124 42.857 0.00 0.00 0.00 2.10
641 1028 4.178956 AGCCACCACCTTTTTCTTAGAA 57.821 40.909 0.00 0.00 0.00 2.10
642 1029 3.889538 AGCCACCACCTTTTTCTTAGAAC 59.110 43.478 0.00 0.00 0.00 3.01
657 1044 6.534475 TCTTAGAACGGAGGCAAAATAGTA 57.466 37.500 0.00 0.00 0.00 1.82
663 1050 3.518303 ACGGAGGCAAAATAGTAGTCCTT 59.482 43.478 0.00 0.00 0.00 3.36
669 1056 7.202011 GGAGGCAAAATAGTAGTCCTTATCTCA 60.202 40.741 0.00 0.00 0.00 3.27
671 1058 8.718656 AGGCAAAATAGTAGTCCTTATCTCATT 58.281 33.333 0.00 0.00 0.00 2.57
679 1086 7.490000 AGTAGTCCTTATCTCATTAACCAACG 58.510 38.462 0.00 0.00 0.00 4.10
811 1230 5.323900 CATGTGCGTTTTCCTATTGTACAG 58.676 41.667 0.00 0.00 0.00 2.74
818 1237 7.094248 TGCGTTTTCCTATTGTACAGTCTACTA 60.094 37.037 0.00 0.00 0.00 1.82
849 1274 2.061028 CGACTTTGGCTGGCATTTTTC 58.939 47.619 4.22 0.00 0.00 2.29
948 1382 1.735559 GCCACGTACGTCTGAACCC 60.736 63.158 19.94 0.00 0.00 4.11
979 1413 7.047891 CCCAAGTGCTTCACTATAAATACTGA 58.952 38.462 0.00 0.00 44.62 3.41
1063 1497 3.311048 GCCTCTAAATTTTCGAGCTCCTG 59.689 47.826 8.47 0.00 0.00 3.86
1066 1500 4.253685 TCTAAATTTTCGAGCTCCTGGTG 58.746 43.478 8.47 0.00 0.00 4.17
1073 1507 2.851102 AGCTCCTGGTGCCAGTGT 60.851 61.111 16.54 0.00 42.15 3.55
1420 1886 6.585702 CCTACATTCATCGAGCTGAAAGATAG 59.414 42.308 10.12 9.32 38.55 2.08
1614 2156 1.891919 GTGCAAAGTGGTCGGCTCA 60.892 57.895 0.00 0.00 0.00 4.26
1642 2191 5.215160 GTCCTGACAAAATGTGTTCATGTC 58.785 41.667 0.00 0.00 41.96 3.06
1703 2256 1.961277 GAAGCCTGTGACCGTGGTG 60.961 63.158 0.00 0.00 0.00 4.17
1896 2460 4.345257 TCTTCAGTCTTCAGCCTACAGTTT 59.655 41.667 0.00 0.00 0.00 2.66
1924 2502 6.487331 ACGGAAAACAATGGAGTAAATGTGTA 59.513 34.615 0.00 0.00 0.00 2.90
1925 2503 7.021196 CGGAAAACAATGGAGTAAATGTGTAG 58.979 38.462 0.00 0.00 0.00 2.74
1950 2528 3.071479 TGATCTTGGCGTTCCTGTTAAC 58.929 45.455 0.00 0.00 0.00 2.01
2073 2651 4.373116 GACGGCGACCTCAAGGCA 62.373 66.667 16.62 0.00 39.32 4.75
2323 2912 4.082787 CCTGCTCCGTGTGTGAATTTTATT 60.083 41.667 0.00 0.00 0.00 1.40
2324 2913 5.446143 TGCTCCGTGTGTGAATTTTATTT 57.554 34.783 0.00 0.00 0.00 1.40
2476 3072 8.265055 TCATTAATCCGTCTGTAATTTTCCTCT 58.735 33.333 0.00 0.00 0.00 3.69
2500 3098 0.675633 TTTTGCCTTCCTCTGCTTGC 59.324 50.000 0.00 0.00 0.00 4.01
2501 3099 0.178981 TTTGCCTTCCTCTGCTTGCT 60.179 50.000 0.00 0.00 0.00 3.91
2502 3100 0.178981 TTGCCTTCCTCTGCTTGCTT 60.179 50.000 0.00 0.00 0.00 3.91
2507 3105 2.224606 CTTCCTCTGCTTGCTTTGTCA 58.775 47.619 0.00 0.00 0.00 3.58
2508 3106 1.597742 TCCTCTGCTTGCTTTGTCAC 58.402 50.000 0.00 0.00 0.00 3.67
2520 3118 0.313043 TTTGTCACCGAGGAGACGAC 59.687 55.000 13.48 6.91 38.30 4.34
2567 3165 3.558418 GTCGATGTACCAAGTTGTGTGTT 59.442 43.478 1.45 0.00 0.00 3.32
2603 3201 6.471519 CGCAATCCTTGAGAGAAATGAAATTC 59.528 38.462 0.00 0.00 30.49 2.17
2608 3206 5.392380 CCTTGAGAGAAATGAAATTCCACGG 60.392 44.000 0.00 0.00 33.67 4.94
2631 3565 6.259387 CGGTTACTACTTGCTTATTAAAGGGG 59.741 42.308 0.00 0.00 32.98 4.79
2638 3572 9.403583 CTACTTGCTTATTAAAGGGGAATTACA 57.596 33.333 0.00 0.00 32.98 2.41
2641 3575 8.519799 TTGCTTATTAAAGGGGAATTACAGAG 57.480 34.615 0.00 0.00 32.98 3.35
2658 3592 3.879295 ACAGAGGATGCAAATTACCGATG 59.121 43.478 0.00 0.00 0.00 3.84
2670 3604 5.455056 AATTACCGATGCTCTGTACTAGG 57.545 43.478 0.00 0.00 0.00 3.02
2672 3606 3.014304 ACCGATGCTCTGTACTAGGAA 57.986 47.619 0.00 0.00 0.00 3.36
2675 3609 3.489398 CCGATGCTCTGTACTAGGAACAC 60.489 52.174 0.00 0.00 0.00 3.32
2676 3610 3.489398 CGATGCTCTGTACTAGGAACACC 60.489 52.174 0.00 0.00 0.00 4.16
2677 3611 1.816835 TGCTCTGTACTAGGAACACCG 59.183 52.381 0.00 0.00 0.00 4.94
2678 3612 1.817447 GCTCTGTACTAGGAACACCGT 59.183 52.381 0.00 0.00 0.00 4.83
2679 3613 2.230750 GCTCTGTACTAGGAACACCGTT 59.769 50.000 0.00 0.00 0.00 4.44
2680 3614 3.834610 CTCTGTACTAGGAACACCGTTG 58.165 50.000 0.00 0.00 0.00 4.10
2683 3617 0.244450 TACTAGGAACACCGTTGCCG 59.756 55.000 0.00 0.00 0.00 5.69
2714 3648 4.388499 AACCACCGGTAGCTGCGG 62.388 66.667 6.87 5.66 33.12 5.69
2853 3795 9.537848 CTACTCAATTATTAACACAAACCGTTC 57.462 33.333 0.00 0.00 0.00 3.95
2892 3834 3.728845 TGAAGGAGCTTCAGTTGTACAC 58.271 45.455 0.00 0.00 44.27 2.90
2896 3838 2.224314 GGAGCTTCAGTTGTACACTTGC 59.776 50.000 0.00 1.74 30.92 4.01
2947 3893 2.239201 GCGTACAAAATCTTCGGTTGC 58.761 47.619 0.00 0.00 0.00 4.17
3003 3949 3.814577 CCGCTCGGTATTATGAGGG 57.185 57.895 0.00 0.00 42.81 4.30
3004 3950 0.389948 CCGCTCGGTATTATGAGGGC 60.390 60.000 0.00 0.00 42.09 5.19
3005 3951 0.317160 CGCTCGGTATTATGAGGGCA 59.683 55.000 0.00 0.00 38.16 5.36
3006 3952 1.066858 CGCTCGGTATTATGAGGGCAT 60.067 52.381 0.00 0.00 38.16 4.40
3007 3953 2.350522 GCTCGGTATTATGAGGGCATG 58.649 52.381 0.00 0.00 35.94 4.06
3008 3954 2.289694 GCTCGGTATTATGAGGGCATGT 60.290 50.000 0.00 0.00 35.94 3.21
3009 3955 3.056107 GCTCGGTATTATGAGGGCATGTA 60.056 47.826 0.00 0.00 35.94 2.29
3010 3956 4.495422 CTCGGTATTATGAGGGCATGTAC 58.505 47.826 0.00 0.00 35.94 2.90
3011 3957 3.898741 TCGGTATTATGAGGGCATGTACA 59.101 43.478 0.00 0.00 35.94 2.90
3012 3958 4.345547 TCGGTATTATGAGGGCATGTACAA 59.654 41.667 0.00 0.00 35.94 2.41
3013 3959 5.012664 TCGGTATTATGAGGGCATGTACAAT 59.987 40.000 0.00 0.00 35.94 2.71
3014 3960 5.122239 CGGTATTATGAGGGCATGTACAATG 59.878 44.000 0.00 0.12 35.94 2.82
3015 3961 5.415701 GGTATTATGAGGGCATGTACAATGG 59.584 44.000 0.00 0.00 35.94 3.16
3016 3962 4.518278 TTATGAGGGCATGTACAATGGT 57.482 40.909 0.00 0.00 35.94 3.55
3017 3963 2.127271 TGAGGGCATGTACAATGGTG 57.873 50.000 0.00 0.00 0.00 4.17
3018 3964 1.340893 TGAGGGCATGTACAATGGTGG 60.341 52.381 0.00 0.00 0.00 4.61
3019 3965 0.684153 AGGGCATGTACAATGGTGGC 60.684 55.000 11.25 11.25 36.52 5.01
3020 3966 0.969917 GGGCATGTACAATGGTGGCA 60.970 55.000 18.87 0.00 38.72 4.92
3021 3967 1.113788 GGCATGTACAATGGTGGCAT 58.886 50.000 14.01 0.00 37.14 4.40
3022 3968 2.305928 GGCATGTACAATGGTGGCATA 58.694 47.619 14.01 0.00 37.14 3.14
3023 3969 2.892852 GGCATGTACAATGGTGGCATAT 59.107 45.455 14.01 0.00 37.14 1.78
3024 3970 3.305539 GGCATGTACAATGGTGGCATATG 60.306 47.826 14.01 0.00 37.14 1.78
3025 3971 3.305539 GCATGTACAATGGTGGCATATGG 60.306 47.826 0.00 0.00 0.00 2.74
3026 3972 3.941704 TGTACAATGGTGGCATATGGA 57.058 42.857 4.56 0.00 0.00 3.41
3027 3973 3.550820 TGTACAATGGTGGCATATGGAC 58.449 45.455 4.56 0.00 0.00 4.02
3028 3974 2.824689 ACAATGGTGGCATATGGACA 57.175 45.000 4.56 0.00 0.00 4.02
3046 3992 9.743581 ATATGGACACATATGCTTCATGATAAA 57.256 29.630 1.58 0.00 46.01 1.40
3047 3993 7.878547 TGGACACATATGCTTCATGATAAAA 57.121 32.000 1.58 0.00 0.00 1.52
3048 3994 8.291191 TGGACACATATGCTTCATGATAAAAA 57.709 30.769 1.58 0.00 0.00 1.94
3049 3995 8.407832 TGGACACATATGCTTCATGATAAAAAG 58.592 33.333 1.58 0.00 0.00 2.27
3050 3996 8.408601 GGACACATATGCTTCATGATAAAAAGT 58.591 33.333 1.58 0.00 0.00 2.66
3095 4041 4.519540 TTTTCTTCCCAATGCAAGCTAC 57.480 40.909 0.00 0.00 0.00 3.58
3096 4042 2.128771 TCTTCCCAATGCAAGCTACC 57.871 50.000 0.00 0.00 0.00 3.18
3097 4043 1.354031 TCTTCCCAATGCAAGCTACCA 59.646 47.619 0.00 0.00 0.00 3.25
3098 4044 2.025037 TCTTCCCAATGCAAGCTACCAT 60.025 45.455 0.00 0.00 0.00 3.55
3099 4045 2.530460 TCCCAATGCAAGCTACCATT 57.470 45.000 6.06 6.06 32.20 3.16
3100 4046 3.660970 TCCCAATGCAAGCTACCATTA 57.339 42.857 10.40 0.00 30.96 1.90
3101 4047 3.554934 TCCCAATGCAAGCTACCATTAG 58.445 45.455 10.40 5.05 30.96 1.73
3102 4048 3.053693 TCCCAATGCAAGCTACCATTAGT 60.054 43.478 10.40 0.00 30.96 2.24
3103 4049 3.067180 CCCAATGCAAGCTACCATTAGTG 59.933 47.826 10.40 2.05 30.96 2.74
3148 4094 9.372369 AGAAAATAAAGACTCTAGTACACATGC 57.628 33.333 0.00 0.00 0.00 4.06
3149 4095 9.151471 GAAAATAAAGACTCTAGTACACATGCA 57.849 33.333 0.00 0.00 0.00 3.96
3150 4096 9.672673 AAAATAAAGACTCTAGTACACATGCAT 57.327 29.630 0.00 0.00 0.00 3.96
3151 4097 8.879342 AATAAAGACTCTAGTACACATGCATC 57.121 34.615 0.00 0.00 0.00 3.91
3152 4098 6.537453 AAAGACTCTAGTACACATGCATCT 57.463 37.500 0.00 0.00 0.00 2.90
3153 4099 6.537453 AAGACTCTAGTACACATGCATCTT 57.463 37.500 0.00 0.00 0.00 2.40
3154 4100 6.537453 AGACTCTAGTACACATGCATCTTT 57.463 37.500 0.00 0.00 0.00 2.52
3155 4101 7.646548 AGACTCTAGTACACATGCATCTTTA 57.353 36.000 0.00 0.00 0.00 1.85
3156 4102 7.484975 AGACTCTAGTACACATGCATCTTTAC 58.515 38.462 0.00 0.00 0.00 2.01
3157 4103 7.340743 AGACTCTAGTACACATGCATCTTTACT 59.659 37.037 12.83 12.83 0.00 2.24
3158 4104 7.841956 ACTCTAGTACACATGCATCTTTACTT 58.158 34.615 13.28 2.61 0.00 2.24
3159 4105 8.314751 ACTCTAGTACACATGCATCTTTACTTT 58.685 33.333 13.28 0.00 0.00 2.66
3160 4106 8.703604 TCTAGTACACATGCATCTTTACTTTC 57.296 34.615 13.28 0.00 0.00 2.62
3161 4107 8.311109 TCTAGTACACATGCATCTTTACTTTCA 58.689 33.333 13.28 0.05 0.00 2.69
3162 4108 7.133891 AGTACACATGCATCTTTACTTTCAC 57.866 36.000 0.00 0.00 0.00 3.18
3163 4109 6.936900 AGTACACATGCATCTTTACTTTCACT 59.063 34.615 0.00 0.00 0.00 3.41
3164 4110 6.639632 ACACATGCATCTTTACTTTCACTT 57.360 33.333 0.00 0.00 0.00 3.16
3165 4111 6.672147 ACACATGCATCTTTACTTTCACTTC 58.328 36.000 0.00 0.00 0.00 3.01
3166 4112 6.262944 ACACATGCATCTTTACTTTCACTTCA 59.737 34.615 0.00 0.00 0.00 3.02
3167 4113 7.140705 CACATGCATCTTTACTTTCACTTCAA 58.859 34.615 0.00 0.00 0.00 2.69
3168 4114 7.811236 CACATGCATCTTTACTTTCACTTCAAT 59.189 33.333 0.00 0.00 0.00 2.57
3169 4115 8.025445 ACATGCATCTTTACTTTCACTTCAATC 58.975 33.333 0.00 0.00 0.00 2.67
3170 4116 7.750229 TGCATCTTTACTTTCACTTCAATCT 57.250 32.000 0.00 0.00 0.00 2.40
3171 4117 8.169977 TGCATCTTTACTTTCACTTCAATCTT 57.830 30.769 0.00 0.00 0.00 2.40
3172 4118 8.632679 TGCATCTTTACTTTCACTTCAATCTTT 58.367 29.630 0.00 0.00 0.00 2.52
3173 4119 9.468532 GCATCTTTACTTTCACTTCAATCTTTT 57.531 29.630 0.00 0.00 0.00 2.27
3177 4123 8.856490 TTTACTTTCACTTCAATCTTTTCAGC 57.144 30.769 0.00 0.00 0.00 4.26
3178 4124 6.705863 ACTTTCACTTCAATCTTTTCAGCT 57.294 33.333 0.00 0.00 0.00 4.24
3179 4125 7.105241 ACTTTCACTTCAATCTTTTCAGCTT 57.895 32.000 0.00 0.00 0.00 3.74
3180 4126 7.550712 ACTTTCACTTCAATCTTTTCAGCTTT 58.449 30.769 0.00 0.00 0.00 3.51
3181 4127 8.037166 ACTTTCACTTCAATCTTTTCAGCTTTT 58.963 29.630 0.00 0.00 0.00 2.27
3182 4128 7.760131 TTCACTTCAATCTTTTCAGCTTTTG 57.240 32.000 0.00 0.00 0.00 2.44
3183 4129 6.866480 TCACTTCAATCTTTTCAGCTTTTGT 58.134 32.000 0.00 0.00 0.00 2.83
3184 4130 6.974622 TCACTTCAATCTTTTCAGCTTTTGTC 59.025 34.615 0.00 0.00 0.00 3.18
3185 4131 6.753279 CACTTCAATCTTTTCAGCTTTTGTCA 59.247 34.615 0.00 0.00 0.00 3.58
3186 4132 7.437267 CACTTCAATCTTTTCAGCTTTTGTCAT 59.563 33.333 0.00 0.00 0.00 3.06
3187 4133 7.650903 ACTTCAATCTTTTCAGCTTTTGTCATC 59.349 33.333 0.00 0.00 0.00 2.92
3188 4134 6.144854 TCAATCTTTTCAGCTTTTGTCATCG 58.855 36.000 0.00 0.00 0.00 3.84
3189 4135 4.488126 TCTTTTCAGCTTTTGTCATCGG 57.512 40.909 0.00 0.00 0.00 4.18
3190 4136 4.133820 TCTTTTCAGCTTTTGTCATCGGA 58.866 39.130 0.00 0.00 0.00 4.55
3191 4137 3.896648 TTTCAGCTTTTGTCATCGGAC 57.103 42.857 0.00 0.00 44.57 4.79
3192 4138 1.808411 TCAGCTTTTGTCATCGGACC 58.192 50.000 0.00 0.00 43.65 4.46
3193 4139 1.071542 TCAGCTTTTGTCATCGGACCA 59.928 47.619 0.00 0.00 43.65 4.02
3194 4140 1.197721 CAGCTTTTGTCATCGGACCAC 59.802 52.381 0.00 0.00 43.65 4.16
3195 4141 1.202758 AGCTTTTGTCATCGGACCACA 60.203 47.619 0.00 0.00 43.65 4.17
3196 4142 1.069227 GCTTTTGTCATCGGACCACAC 60.069 52.381 0.00 0.00 43.65 3.82
3197 4143 1.535462 CTTTTGTCATCGGACCACACC 59.465 52.381 0.00 0.00 43.65 4.16
3198 4144 0.762418 TTTGTCATCGGACCACACCT 59.238 50.000 0.00 0.00 43.65 4.00
3199 4145 0.762418 TTGTCATCGGACCACACCTT 59.238 50.000 0.00 0.00 43.65 3.50
3200 4146 0.762418 TGTCATCGGACCACACCTTT 59.238 50.000 0.00 0.00 43.65 3.11
3201 4147 1.142060 TGTCATCGGACCACACCTTTT 59.858 47.619 0.00 0.00 43.65 2.27
3202 4148 1.804748 GTCATCGGACCACACCTTTTC 59.195 52.381 0.00 0.00 38.12 2.29
3203 4149 1.697432 TCATCGGACCACACCTTTTCT 59.303 47.619 0.00 0.00 0.00 2.52
3204 4150 2.076863 CATCGGACCACACCTTTTCTC 58.923 52.381 0.00 0.00 0.00 2.87
3205 4151 1.420430 TCGGACCACACCTTTTCTCT 58.580 50.000 0.00 0.00 0.00 3.10
3206 4152 1.766496 TCGGACCACACCTTTTCTCTT 59.234 47.619 0.00 0.00 0.00 2.85
3207 4153 2.143925 CGGACCACACCTTTTCTCTTC 58.856 52.381 0.00 0.00 0.00 2.87
3208 4154 2.484770 CGGACCACACCTTTTCTCTTCA 60.485 50.000 0.00 0.00 0.00 3.02
3209 4155 3.551846 GGACCACACCTTTTCTCTTCAA 58.448 45.455 0.00 0.00 0.00 2.69
3210 4156 3.315470 GGACCACACCTTTTCTCTTCAAC 59.685 47.826 0.00 0.00 0.00 3.18
3211 4157 3.288092 ACCACACCTTTTCTCTTCAACC 58.712 45.455 0.00 0.00 0.00 3.77
3212 4158 3.287222 CCACACCTTTTCTCTTCAACCA 58.713 45.455 0.00 0.00 0.00 3.67
3213 4159 3.066760 CCACACCTTTTCTCTTCAACCAC 59.933 47.826 0.00 0.00 0.00 4.16
3214 4160 3.066760 CACACCTTTTCTCTTCAACCACC 59.933 47.826 0.00 0.00 0.00 4.61
3215 4161 2.623416 CACCTTTTCTCTTCAACCACCC 59.377 50.000 0.00 0.00 0.00 4.61
3216 4162 1.880027 CCTTTTCTCTTCAACCACCCG 59.120 52.381 0.00 0.00 0.00 5.28
3217 4163 1.266989 CTTTTCTCTTCAACCACCCGC 59.733 52.381 0.00 0.00 0.00 6.13
3218 4164 0.536460 TTTCTCTTCAACCACCCGCC 60.536 55.000 0.00 0.00 0.00 6.13
3219 4165 1.415672 TTCTCTTCAACCACCCGCCT 61.416 55.000 0.00 0.00 0.00 5.52
3220 4166 1.376037 CTCTTCAACCACCCGCCTC 60.376 63.158 0.00 0.00 0.00 4.70
3221 4167 2.359975 CTTCAACCACCCGCCTCC 60.360 66.667 0.00 0.00 0.00 4.30
3222 4168 2.852075 TTCAACCACCCGCCTCCT 60.852 61.111 0.00 0.00 0.00 3.69
3223 4169 3.190738 TTCAACCACCCGCCTCCTG 62.191 63.158 0.00 0.00 0.00 3.86
3224 4170 4.722700 CAACCACCCGCCTCCTGG 62.723 72.222 0.00 0.00 0.00 4.45
3225 4171 4.974438 AACCACCCGCCTCCTGGA 62.974 66.667 0.00 0.00 34.57 3.86
3228 4174 3.465403 CACCCGCCTCCTGGAGAG 61.465 72.222 25.18 17.02 42.83 3.20
3240 4186 3.143338 GGAGAGGATCCCGCTTCC 58.857 66.667 8.55 6.90 43.01 3.46
3241 4187 2.512355 GGAGAGGATCCCGCTTCCC 61.512 68.421 8.55 1.29 43.01 3.97
3242 4188 1.458588 GAGAGGATCCCGCTTCCCT 60.459 63.158 8.55 0.00 32.83 4.20
3243 4189 0.178958 GAGAGGATCCCGCTTCCCTA 60.179 60.000 8.55 0.00 32.83 3.53
3244 4190 0.489567 AGAGGATCCCGCTTCCCTAT 59.510 55.000 8.55 0.00 33.66 2.57
3245 4191 0.899019 GAGGATCCCGCTTCCCTATC 59.101 60.000 8.55 0.00 33.45 2.08
3246 4192 0.489567 AGGATCCCGCTTCCCTATCT 59.510 55.000 8.55 0.00 33.45 1.98
3247 4193 0.610687 GGATCCCGCTTCCCTATCTG 59.389 60.000 0.00 0.00 0.00 2.90
3248 4194 1.633774 GATCCCGCTTCCCTATCTGA 58.366 55.000 0.00 0.00 0.00 3.27
3249 4195 1.971357 GATCCCGCTTCCCTATCTGAA 59.029 52.381 0.00 0.00 0.00 3.02
3250 4196 1.120530 TCCCGCTTCCCTATCTGAAC 58.879 55.000 0.00 0.00 0.00 3.18
3251 4197 0.106894 CCCGCTTCCCTATCTGAACC 59.893 60.000 0.00 0.00 0.00 3.62
3252 4198 1.123928 CCGCTTCCCTATCTGAACCT 58.876 55.000 0.00 0.00 0.00 3.50
3253 4199 2.317040 CCGCTTCCCTATCTGAACCTA 58.683 52.381 0.00 0.00 0.00 3.08
3254 4200 2.036089 CCGCTTCCCTATCTGAACCTAC 59.964 54.545 0.00 0.00 0.00 3.18
3255 4201 2.959707 CGCTTCCCTATCTGAACCTACT 59.040 50.000 0.00 0.00 0.00 2.57
3256 4202 3.385111 CGCTTCCCTATCTGAACCTACTT 59.615 47.826 0.00 0.00 0.00 2.24
3257 4203 4.141914 CGCTTCCCTATCTGAACCTACTTT 60.142 45.833 0.00 0.00 0.00 2.66
3258 4204 5.068723 CGCTTCCCTATCTGAACCTACTTTA 59.931 44.000 0.00 0.00 0.00 1.85
3259 4205 6.282167 GCTTCCCTATCTGAACCTACTTTAC 58.718 44.000 0.00 0.00 0.00 2.01
3260 4206 6.461110 TTCCCTATCTGAACCTACTTTACG 57.539 41.667 0.00 0.00 0.00 3.18
3261 4207 5.513233 TCCCTATCTGAACCTACTTTACGT 58.487 41.667 0.00 0.00 0.00 3.57
3262 4208 5.591877 TCCCTATCTGAACCTACTTTACGTC 59.408 44.000 0.00 0.00 0.00 4.34
3263 4209 5.359009 CCCTATCTGAACCTACTTTACGTCA 59.641 44.000 0.00 0.00 0.00 4.35
3264 4210 6.040616 CCCTATCTGAACCTACTTTACGTCAT 59.959 42.308 0.00 0.00 0.00 3.06
3265 4211 7.230108 CCCTATCTGAACCTACTTTACGTCATA 59.770 40.741 0.00 0.00 0.00 2.15
3266 4212 8.794553 CCTATCTGAACCTACTTTACGTCATAT 58.205 37.037 0.00 0.00 0.00 1.78
3267 4213 9.828852 CTATCTGAACCTACTTTACGTCATATC 57.171 37.037 0.00 0.00 0.00 1.63
3268 4214 7.035840 TCTGAACCTACTTTACGTCATATCC 57.964 40.000 0.00 0.00 0.00 2.59
3269 4215 5.824429 TGAACCTACTTTACGTCATATCCG 58.176 41.667 0.00 0.00 0.00 4.18
3270 4216 5.589855 TGAACCTACTTTACGTCATATCCGA 59.410 40.000 0.00 0.00 0.00 4.55
3271 4217 6.263842 TGAACCTACTTTACGTCATATCCGAT 59.736 38.462 0.00 0.00 0.00 4.18
3272 4218 6.251655 ACCTACTTTACGTCATATCCGATC 57.748 41.667 0.00 0.00 0.00 3.69
3273 4219 5.182760 ACCTACTTTACGTCATATCCGATCC 59.817 44.000 0.00 0.00 0.00 3.36
3274 4220 5.415077 CCTACTTTACGTCATATCCGATCCT 59.585 44.000 0.00 0.00 0.00 3.24
3275 4221 6.596888 CCTACTTTACGTCATATCCGATCCTA 59.403 42.308 0.00 0.00 0.00 2.94
3276 4222 6.251655 ACTTTACGTCATATCCGATCCTAC 57.748 41.667 0.00 0.00 0.00 3.18
3277 4223 5.766670 ACTTTACGTCATATCCGATCCTACA 59.233 40.000 0.00 0.00 0.00 2.74
3278 4224 6.433404 ACTTTACGTCATATCCGATCCTACAT 59.567 38.462 0.00 0.00 0.00 2.29
3279 4225 4.703645 ACGTCATATCCGATCCTACATG 57.296 45.455 0.00 0.00 0.00 3.21
3280 4226 3.444034 ACGTCATATCCGATCCTACATGG 59.556 47.826 0.00 0.00 37.10 3.66
3281 4227 3.735208 CGTCATATCCGATCCTACATGGC 60.735 52.174 0.00 0.00 35.26 4.40
3282 4228 3.195610 GTCATATCCGATCCTACATGGCA 59.804 47.826 0.00 0.00 35.26 4.92
3283 4229 4.033009 TCATATCCGATCCTACATGGCAT 58.967 43.478 0.00 0.00 35.26 4.40
3284 4230 2.775911 ATCCGATCCTACATGGCATG 57.224 50.000 25.31 25.31 35.26 4.06
3285 4231 0.035317 TCCGATCCTACATGGCATGC 59.965 55.000 26.70 9.90 35.26 4.06
3286 4232 1.293963 CCGATCCTACATGGCATGCG 61.294 60.000 26.70 19.33 35.26 4.73
3287 4233 0.319813 CGATCCTACATGGCATGCGA 60.320 55.000 26.70 19.03 35.26 5.10
3288 4234 1.436600 GATCCTACATGGCATGCGAG 58.563 55.000 26.70 22.01 35.26 5.03
3289 4235 1.001293 GATCCTACATGGCATGCGAGA 59.999 52.381 26.70 19.56 35.26 4.04
3290 4236 0.104855 TCCTACATGGCATGCGAGAC 59.895 55.000 26.70 0.00 35.26 3.36
3291 4237 0.179076 CCTACATGGCATGCGAGACA 60.179 55.000 26.70 4.00 0.00 3.41
3292 4238 1.541889 CCTACATGGCATGCGAGACAT 60.542 52.381 26.70 8.49 40.66 3.06
3293 4239 1.797046 CTACATGGCATGCGAGACATC 59.203 52.381 26.70 0.00 36.64 3.06
3294 4240 0.107557 ACATGGCATGCGAGACATCA 60.108 50.000 26.70 1.95 36.64 3.07
3295 4241 0.306840 CATGGCATGCGAGACATCAC 59.693 55.000 15.53 0.00 36.64 3.06
3296 4242 0.816825 ATGGCATGCGAGACATCACC 60.817 55.000 12.44 0.00 36.64 4.02
3297 4243 1.153289 GGCATGCGAGACATCACCT 60.153 57.895 12.44 0.00 36.64 4.00
3298 4244 0.745845 GGCATGCGAGACATCACCTT 60.746 55.000 12.44 0.00 36.64 3.50
3299 4245 1.473257 GGCATGCGAGACATCACCTTA 60.473 52.381 12.44 0.00 36.64 2.69
3300 4246 2.279741 GCATGCGAGACATCACCTTAA 58.720 47.619 0.00 0.00 36.64 1.85
3301 4247 2.286294 GCATGCGAGACATCACCTTAAG 59.714 50.000 0.00 0.00 36.64 1.85
3302 4248 2.672961 TGCGAGACATCACCTTAAGG 57.327 50.000 20.42 20.42 42.17 2.69
3303 4249 1.291132 GCGAGACATCACCTTAAGGC 58.709 55.000 21.92 3.90 39.32 4.35
3304 4250 1.134670 GCGAGACATCACCTTAAGGCT 60.135 52.381 21.92 9.07 39.32 4.58
3305 4251 2.100916 GCGAGACATCACCTTAAGGCTA 59.899 50.000 21.92 10.11 39.32 3.93
3306 4252 3.243907 GCGAGACATCACCTTAAGGCTAT 60.244 47.826 21.92 12.05 39.32 2.97
3307 4253 4.302455 CGAGACATCACCTTAAGGCTATG 58.698 47.826 24.88 24.88 39.32 2.23
3308 4254 4.061596 GAGACATCACCTTAAGGCTATGC 58.938 47.826 25.81 20.31 39.32 3.14
3309 4255 3.455910 AGACATCACCTTAAGGCTATGCA 59.544 43.478 25.81 9.54 39.32 3.96
3310 4256 4.103785 AGACATCACCTTAAGGCTATGCAT 59.896 41.667 25.81 16.75 39.32 3.96
3311 4257 4.796606 ACATCACCTTAAGGCTATGCATT 58.203 39.130 25.81 11.97 39.32 3.56
3312 4258 4.581824 ACATCACCTTAAGGCTATGCATTG 59.418 41.667 25.81 14.50 39.32 2.82
3313 4259 4.235079 TCACCTTAAGGCTATGCATTGT 57.765 40.909 21.92 0.00 39.32 2.71
3314 4260 3.947196 TCACCTTAAGGCTATGCATTGTG 59.053 43.478 21.92 8.15 39.32 3.33
3315 4261 2.689983 ACCTTAAGGCTATGCATTGTGC 59.310 45.455 21.92 7.50 40.85 4.57
3326 4272 3.429043 CATTGTGCATGCCCTGAAC 57.571 52.632 16.68 6.70 33.47 3.18
3327 4273 0.892755 CATTGTGCATGCCCTGAACT 59.107 50.000 16.68 0.00 34.08 3.01
3328 4274 0.892755 ATTGTGCATGCCCTGAACTG 59.107 50.000 16.68 0.00 34.08 3.16
3329 4275 1.180456 TTGTGCATGCCCTGAACTGG 61.180 55.000 16.68 0.00 34.08 4.00
3330 4276 1.303561 GTGCATGCCCTGAACTGGA 60.304 57.895 16.68 0.00 29.73 3.86
3331 4277 0.682209 GTGCATGCCCTGAACTGGAT 60.682 55.000 16.68 0.00 29.73 3.41
3332 4278 0.918258 TGCATGCCCTGAACTGGATA 59.082 50.000 16.68 0.00 0.00 2.59
3333 4279 1.134007 TGCATGCCCTGAACTGGATAG 60.134 52.381 16.68 0.00 0.00 2.08
3334 4280 1.602311 CATGCCCTGAACTGGATAGC 58.398 55.000 0.00 0.00 0.00 2.97
3335 4281 0.107456 ATGCCCTGAACTGGATAGCG 59.893 55.000 0.00 0.00 0.00 4.26
3336 4282 1.227674 GCCCTGAACTGGATAGCGG 60.228 63.158 0.00 0.00 0.00 5.52
3337 4283 1.227674 CCCTGAACTGGATAGCGGC 60.228 63.158 0.00 0.00 0.00 6.53
3338 4284 1.227674 CCTGAACTGGATAGCGGCC 60.228 63.158 0.00 0.00 0.00 6.13
3339 4285 1.522092 CTGAACTGGATAGCGGCCA 59.478 57.895 2.24 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.671054 CGGGCTGACACCGTCAAAT 60.671 57.895 0.00 0.00 46.03 2.32
1 2 2.280524 CGGGCTGACACCGTCAAA 60.281 61.111 0.00 0.00 46.03 2.69
8 9 4.025401 CAAACGGCGGGCTGACAC 62.025 66.667 13.24 0.00 0.00 3.67
9 10 4.555709 ACAAACGGCGGGCTGACA 62.556 61.111 13.24 0.00 0.00 3.58
10 11 3.723348 GACAAACGGCGGGCTGAC 61.723 66.667 13.24 0.00 0.00 3.51
19 20 4.278513 TGGCCCAGGGACAAACGG 62.279 66.667 13.68 0.00 38.06 4.44
20 21 2.983592 GTGGCCCAGGGACAAACG 60.984 66.667 18.96 0.00 45.35 3.60
21 22 2.600470 GGTGGCCCAGGGACAAAC 60.600 66.667 18.96 8.89 45.35 2.93
22 23 3.106609 TGGTGGCCCAGGGACAAA 61.107 61.111 18.96 4.28 45.35 2.83
34 35 0.179009 CATAGATGTGGCCCTGGTGG 60.179 60.000 0.00 0.00 37.09 4.61
35 36 0.820891 GCATAGATGTGGCCCTGGTG 60.821 60.000 0.00 0.00 0.00 4.17
36 37 1.533711 GCATAGATGTGGCCCTGGT 59.466 57.895 0.00 0.00 0.00 4.00
37 38 1.228367 GGCATAGATGTGGCCCTGG 60.228 63.158 0.00 0.00 41.90 4.45
38 39 1.598962 CGGCATAGATGTGGCCCTG 60.599 63.158 0.00 0.00 44.90 4.45
39 40 1.766059 TCGGCATAGATGTGGCCCT 60.766 57.895 0.00 0.00 44.90 5.19
40 41 1.598130 GTCGGCATAGATGTGGCCC 60.598 63.158 0.00 0.00 44.90 5.80
41 42 0.882042 CTGTCGGCATAGATGTGGCC 60.882 60.000 0.00 0.00 44.27 5.36
42 43 1.502163 GCTGTCGGCATAGATGTGGC 61.502 60.000 0.00 0.00 41.35 5.01
43 44 0.882042 GGCTGTCGGCATAGATGTGG 60.882 60.000 5.89 0.00 44.01 4.17
44 45 0.105593 AGGCTGTCGGCATAGATGTG 59.894 55.000 5.89 0.00 44.01 3.21
45 46 1.704641 TAGGCTGTCGGCATAGATGT 58.295 50.000 5.89 0.00 44.01 3.06
46 47 2.036475 AGTTAGGCTGTCGGCATAGATG 59.964 50.000 5.89 0.00 44.01 2.90
47 48 2.320781 AGTTAGGCTGTCGGCATAGAT 58.679 47.619 5.89 0.00 44.01 1.98
48 49 1.776662 AGTTAGGCTGTCGGCATAGA 58.223 50.000 5.89 0.00 44.01 1.98
49 50 3.579709 CATAGTTAGGCTGTCGGCATAG 58.420 50.000 5.89 0.00 44.01 2.23
50 51 2.288825 GCATAGTTAGGCTGTCGGCATA 60.289 50.000 5.89 0.00 44.01 3.14
51 52 1.541233 GCATAGTTAGGCTGTCGGCAT 60.541 52.381 5.89 0.00 44.01 4.40
52 53 0.179084 GCATAGTTAGGCTGTCGGCA 60.179 55.000 5.89 0.00 44.01 5.69
53 54 0.880718 GGCATAGTTAGGCTGTCGGC 60.881 60.000 0.00 0.00 40.90 5.54
54 55 0.753262 AGGCATAGTTAGGCTGTCGG 59.247 55.000 0.00 0.00 40.72 4.79
55 56 2.604855 CGTAGGCATAGTTAGGCTGTCG 60.605 54.545 0.00 0.00 42.36 4.35
56 57 2.288273 CCGTAGGCATAGTTAGGCTGTC 60.288 54.545 0.00 0.00 46.14 3.51
57 58 1.687123 CCGTAGGCATAGTTAGGCTGT 59.313 52.381 0.00 0.00 46.14 4.40
58 59 2.440539 CCGTAGGCATAGTTAGGCTG 57.559 55.000 0.00 0.00 46.14 4.85
78 79 1.244816 TCGATCTATGCCTACGGTGG 58.755 55.000 0.00 0.00 0.00 4.61
79 80 4.902443 ATATCGATCTATGCCTACGGTG 57.098 45.455 0.00 0.00 0.00 4.94
80 81 5.048643 GCATATATCGATCTATGCCTACGGT 60.049 44.000 30.95 0.00 42.76 4.83
81 82 5.394802 GCATATATCGATCTATGCCTACGG 58.605 45.833 30.95 9.81 42.76 4.02
87 88 3.908978 CGTCGGCATATATCGATCTATGC 59.091 47.826 32.20 32.20 46.08 3.14
88 89 4.467735 CCGTCGGCATATATCGATCTATG 58.532 47.826 20.76 20.76 37.73 2.23
89 90 4.750952 CCGTCGGCATATATCGATCTAT 57.249 45.455 0.00 0.00 37.73 1.98
104 105 1.300697 GGCATAGTTAGGCCGTCGG 60.301 63.158 6.99 6.99 43.70 4.79
105 106 4.338327 GGCATAGTTAGGCCGTCG 57.662 61.111 0.00 0.00 43.70 5.12
131 132 1.633774 ACCTCCATCTATGCCTACGG 58.366 55.000 0.00 0.00 0.00 4.02
132 133 3.429547 GCATACCTCCATCTATGCCTACG 60.430 52.174 0.00 0.00 39.51 3.51
133 134 4.130286 GCATACCTCCATCTATGCCTAC 57.870 50.000 0.00 0.00 39.51 3.18
137 138 1.550524 TCGGCATACCTCCATCTATGC 59.449 52.381 1.72 1.72 43.07 3.14
138 139 2.416027 CGTCGGCATACCTCCATCTATG 60.416 54.545 0.00 0.00 0.00 2.23
139 140 1.819288 CGTCGGCATACCTCCATCTAT 59.181 52.381 0.00 0.00 0.00 1.98
140 141 1.244816 CGTCGGCATACCTCCATCTA 58.755 55.000 0.00 0.00 0.00 1.98
141 142 1.464376 CCGTCGGCATACCTCCATCT 61.464 60.000 0.00 0.00 0.00 2.90
142 143 1.006102 CCGTCGGCATACCTCCATC 60.006 63.158 0.00 0.00 0.00 3.51
143 144 3.138625 CCGTCGGCATACCTCCAT 58.861 61.111 0.00 0.00 0.00 3.41
154 155 1.300233 GGCATAGAGAAGCCGTCGG 60.300 63.158 6.99 6.99 41.70 4.79
155 156 4.327885 GGCATAGAGAAGCCGTCG 57.672 61.111 0.00 0.00 41.70 5.12
160 161 4.327885 CCGTCGGCATAGAGAAGC 57.672 61.111 0.00 0.00 0.00 3.86
171 172 2.746277 CCTGGGAAAAGCCGTCGG 60.746 66.667 6.99 6.99 37.63 4.79
172 173 3.431725 GCCTGGGAAAAGCCGTCG 61.432 66.667 0.00 0.00 37.63 5.12
173 174 3.062466 GGCCTGGGAAAAGCCGTC 61.062 66.667 0.00 0.00 36.84 4.79
176 177 2.207229 AAACGGCCTGGGAAAAGCC 61.207 57.895 0.00 0.00 43.53 4.35
177 178 1.006220 CAAACGGCCTGGGAAAAGC 60.006 57.895 0.00 0.00 0.00 3.51
178 179 1.006220 GCAAACGGCCTGGGAAAAG 60.006 57.895 0.00 0.00 36.11 2.27
179 180 2.851071 CGCAAACGGCCTGGGAAAA 61.851 57.895 0.00 0.00 40.31 2.29
180 181 2.677765 TACGCAAACGGCCTGGGAAA 62.678 55.000 13.60 0.12 46.04 3.13
181 182 3.179888 TACGCAAACGGCCTGGGAA 62.180 57.895 13.60 0.00 46.04 3.97
182 183 3.599285 CTACGCAAACGGCCTGGGA 62.599 63.158 13.60 0.00 46.04 4.37
183 184 3.124921 CTACGCAAACGGCCTGGG 61.125 66.667 0.00 3.22 46.04 4.45
184 185 3.799755 GCTACGCAAACGGCCTGG 61.800 66.667 0.00 0.00 46.04 4.45
185 186 2.740714 GAGCTACGCAAACGGCCTG 61.741 63.158 0.00 0.00 46.04 4.85
186 187 2.434359 GAGCTACGCAAACGGCCT 60.434 61.111 0.00 0.00 46.04 5.19
187 188 3.849953 CGAGCTACGCAAACGGCC 61.850 66.667 0.00 0.00 46.04 6.13
188 189 2.789203 CTCGAGCTACGCAAACGGC 61.789 63.158 0.00 0.00 46.04 5.68
189 190 1.007336 AACTCGAGCTACGCAAACGG 61.007 55.000 13.61 0.00 46.04 4.44
191 192 2.285084 GCATAACTCGAGCTACGCAAAC 60.285 50.000 13.61 0.00 42.26 2.93
192 193 1.924524 GCATAACTCGAGCTACGCAAA 59.075 47.619 13.61 0.00 42.26 3.68
193 194 1.556564 GCATAACTCGAGCTACGCAA 58.443 50.000 13.61 0.00 42.26 4.85
194 195 0.248907 GGCATAACTCGAGCTACGCA 60.249 55.000 14.96 0.00 42.26 5.24
195 196 1.269444 CGGCATAACTCGAGCTACGC 61.269 60.000 13.61 9.06 42.26 4.42
196 197 0.306840 TCGGCATAACTCGAGCTACG 59.693 55.000 13.61 9.10 44.09 3.51
197 198 1.756367 GTCGGCATAACTCGAGCTAC 58.244 55.000 13.61 0.00 36.00 3.58
198 199 0.306840 CGTCGGCATAACTCGAGCTA 59.693 55.000 13.61 4.91 36.00 3.32
199 200 1.064296 CGTCGGCATAACTCGAGCT 59.936 57.895 13.61 2.05 36.00 4.09
200 201 1.944676 CCGTCGGCATAACTCGAGC 60.945 63.158 13.61 0.00 36.00 5.03
201 202 4.303853 CCGTCGGCATAACTCGAG 57.696 61.111 11.84 11.84 36.00 4.04
212 213 4.992511 TTTTGTCGGGGCCGTCGG 62.993 66.667 6.99 6.99 40.74 4.79
213 214 2.961669 CTTTTTGTCGGGGCCGTCG 61.962 63.158 10.39 10.39 40.74 5.12
214 215 2.951458 CTTTTTGTCGGGGCCGTC 59.049 61.111 0.00 0.00 40.74 4.79
215 216 3.292159 GCTTTTTGTCGGGGCCGT 61.292 61.111 0.00 0.00 40.74 5.68
216 217 4.050934 GGCTTTTTGTCGGGGCCG 62.051 66.667 0.00 0.00 41.35 6.13
217 218 4.050934 CGGCTTTTTGTCGGGGCC 62.051 66.667 0.00 0.00 40.56 5.80
232 233 0.389948 GGCCTTATCTATGCCGACGG 60.390 60.000 10.29 10.29 35.08 4.79
233 234 3.123674 GGCCTTATCTATGCCGACG 57.876 57.895 0.00 0.00 35.08 5.12
237 238 1.405661 GCCTACGGCCTTATCTATGCC 60.406 57.143 0.00 0.00 44.06 4.40
238 239 2.011540 GCCTACGGCCTTATCTATGC 57.988 55.000 0.00 0.00 44.06 3.14
249 250 7.908458 CGGAATAACCCTATATGCCTACGGC 62.908 52.000 0.00 0.00 41.87 5.68
250 251 4.441079 CGGAATAACCCTATATGCCTACGG 60.441 50.000 0.00 0.00 29.70 4.02
251 252 4.441079 CCGGAATAACCCTATATGCCTACG 60.441 50.000 0.00 0.00 29.70 3.51
252 253 4.468868 ACCGGAATAACCCTATATGCCTAC 59.531 45.833 9.46 0.00 29.70 3.18
253 254 4.691238 ACCGGAATAACCCTATATGCCTA 58.309 43.478 9.46 0.00 29.70 3.93
254 255 3.527937 ACCGGAATAACCCTATATGCCT 58.472 45.455 9.46 0.00 29.70 4.75
255 256 3.994931 ACCGGAATAACCCTATATGCC 57.005 47.619 9.46 0.00 34.64 4.40
256 257 5.416947 CACTACCGGAATAACCCTATATGC 58.583 45.833 9.46 0.00 34.64 3.14
257 258 5.482878 ACCACTACCGGAATAACCCTATATG 59.517 44.000 9.46 0.00 34.64 1.78
258 259 5.482878 CACCACTACCGGAATAACCCTATAT 59.517 44.000 9.46 0.00 34.64 0.86
259 260 4.834496 CACCACTACCGGAATAACCCTATA 59.166 45.833 9.46 0.00 34.64 1.31
260 261 3.644738 CACCACTACCGGAATAACCCTAT 59.355 47.826 9.46 0.00 34.64 2.57
261 262 3.033184 CACCACTACCGGAATAACCCTA 58.967 50.000 9.46 0.00 34.64 3.53
262 263 1.835531 CACCACTACCGGAATAACCCT 59.164 52.381 9.46 0.00 34.64 4.34
263 264 1.134310 CCACCACTACCGGAATAACCC 60.134 57.143 9.46 0.00 34.64 4.11
264 265 1.556451 ACCACCACTACCGGAATAACC 59.444 52.381 9.46 0.00 0.00 2.85
265 266 3.339253 AACCACCACTACCGGAATAAC 57.661 47.619 9.46 0.00 0.00 1.89
266 267 3.327172 TGAAACCACCACTACCGGAATAA 59.673 43.478 9.46 0.00 0.00 1.40
267 268 2.905085 TGAAACCACCACTACCGGAATA 59.095 45.455 9.46 0.00 0.00 1.75
268 269 1.700739 TGAAACCACCACTACCGGAAT 59.299 47.619 9.46 0.00 0.00 3.01
269 270 1.129917 TGAAACCACCACTACCGGAA 58.870 50.000 9.46 0.00 0.00 4.30
270 271 0.393820 GTGAAACCACCACTACCGGA 59.606 55.000 9.46 0.00 0.00 5.14
271 272 0.395312 AGTGAAACCACCACTACCGG 59.605 55.000 0.00 0.00 42.51 5.28
272 273 1.871039 CAAGTGAAACCACCACTACCG 59.129 52.381 0.00 0.00 43.42 4.02
273 274 1.607148 GCAAGTGAAACCACCACTACC 59.393 52.381 0.00 0.00 43.42 3.18
274 275 2.572290 AGCAAGTGAAACCACCACTAC 58.428 47.619 0.00 0.00 43.42 2.73
275 276 3.211045 GAAGCAAGTGAAACCACCACTA 58.789 45.455 0.00 0.00 43.42 2.74
276 277 2.024414 GAAGCAAGTGAAACCACCACT 58.976 47.619 0.00 0.00 45.88 4.00
277 278 1.268539 CGAAGCAAGTGAAACCACCAC 60.269 52.381 0.00 0.00 37.80 4.16
278 279 1.021202 CGAAGCAAGTGAAACCACCA 58.979 50.000 0.00 0.00 37.80 4.17
279 280 1.021968 ACGAAGCAAGTGAAACCACC 58.978 50.000 0.00 0.00 37.80 4.61
280 281 2.223377 CCTACGAAGCAAGTGAAACCAC 59.777 50.000 0.00 0.00 37.80 4.16
281 282 2.158871 ACCTACGAAGCAAGTGAAACCA 60.159 45.455 0.00 0.00 37.80 3.67
282 283 2.490991 ACCTACGAAGCAAGTGAAACC 58.509 47.619 0.00 0.00 37.80 3.27
283 284 3.558418 TCAACCTACGAAGCAAGTGAAAC 59.442 43.478 0.00 0.00 0.00 2.78
284 285 3.799366 TCAACCTACGAAGCAAGTGAAA 58.201 40.909 0.00 0.00 0.00 2.69
285 286 3.462483 TCAACCTACGAAGCAAGTGAA 57.538 42.857 0.00 0.00 0.00 3.18
286 287 3.678056 ATCAACCTACGAAGCAAGTGA 57.322 42.857 0.00 0.00 0.00 3.41
287 288 4.870426 ACATATCAACCTACGAAGCAAGTG 59.130 41.667 0.00 0.00 0.00 3.16
288 289 5.086104 ACATATCAACCTACGAAGCAAGT 57.914 39.130 0.00 0.00 0.00 3.16
289 290 7.715265 AATACATATCAACCTACGAAGCAAG 57.285 36.000 0.00 0.00 0.00 4.01
290 291 9.037737 GTTAATACATATCAACCTACGAAGCAA 57.962 33.333 0.00 0.00 0.00 3.91
291 292 8.418662 AGTTAATACATATCAACCTACGAAGCA 58.581 33.333 0.00 0.00 0.00 3.91
292 293 8.813643 AGTTAATACATATCAACCTACGAAGC 57.186 34.615 0.00 0.00 0.00 3.86
324 325 3.441572 CCAATGAAACACATCCTCCTCAC 59.558 47.826 0.00 0.00 38.38 3.51
325 326 3.330405 TCCAATGAAACACATCCTCCTCA 59.670 43.478 0.00 0.00 38.38 3.86
328 329 4.082125 ACTTCCAATGAAACACATCCTCC 58.918 43.478 0.00 0.00 38.38 4.30
334 335 2.223688 CGGCAACTTCCAATGAAACACA 60.224 45.455 0.00 0.00 0.00 3.72
374 378 9.388672 AGGGCTGGTGTTAATCTATAATAACTA 57.611 33.333 0.00 0.00 34.02 2.24
380 384 9.930158 AAAAATAGGGCTGGTGTTAATCTATAA 57.070 29.630 0.00 0.00 0.00 0.98
456 469 5.338381 CCACCCATCTATCCATACCACATAC 60.338 48.000 0.00 0.00 0.00 2.39
472 485 5.659440 ATTGTTTGTTGATACCACCCATC 57.341 39.130 0.00 0.00 0.00 3.51
495 508 7.667043 AAACAGACAAGCTATCGTTTCATTA 57.333 32.000 11.52 0.00 0.00 1.90
496 509 6.560253 AAACAGACAAGCTATCGTTTCATT 57.440 33.333 11.52 0.00 0.00 2.57
497 510 6.092259 GGTAAACAGACAAGCTATCGTTTCAT 59.908 38.462 16.56 4.99 30.80 2.57
499 512 5.407387 TGGTAAACAGACAAGCTATCGTTTC 59.593 40.000 16.56 11.74 30.80 2.78
500 513 5.178809 GTGGTAAACAGACAAGCTATCGTTT 59.821 40.000 16.94 16.94 32.04 3.60
501 514 4.689345 GTGGTAAACAGACAAGCTATCGTT 59.311 41.667 0.00 0.00 0.00 3.85
502 515 4.243270 GTGGTAAACAGACAAGCTATCGT 58.757 43.478 0.00 0.00 0.00 3.73
503 516 3.617263 GGTGGTAAACAGACAAGCTATCG 59.383 47.826 0.00 0.00 0.00 2.92
504 517 3.939592 GGGTGGTAAACAGACAAGCTATC 59.060 47.826 0.00 0.00 0.00 2.08
506 519 2.706723 TGGGTGGTAAACAGACAAGCTA 59.293 45.455 0.00 0.00 0.00 3.32
507 520 1.493022 TGGGTGGTAAACAGACAAGCT 59.507 47.619 0.00 0.00 0.00 3.74
508 521 1.975660 TGGGTGGTAAACAGACAAGC 58.024 50.000 0.00 0.00 0.00 4.01
512 593 3.506067 CCAAAGATGGGTGGTAAACAGAC 59.494 47.826 0.00 0.00 43.51 3.51
623 1010 4.131596 TCCGTTCTAAGAAAAAGGTGGTG 58.868 43.478 0.00 0.00 0.00 4.17
624 1011 4.386711 CTCCGTTCTAAGAAAAAGGTGGT 58.613 43.478 0.00 0.00 0.00 4.16
625 1012 3.751698 CCTCCGTTCTAAGAAAAAGGTGG 59.248 47.826 0.00 0.00 34.29 4.61
626 1013 3.188667 GCCTCCGTTCTAAGAAAAAGGTG 59.811 47.826 0.00 0.00 0.00 4.00
627 1014 3.181448 TGCCTCCGTTCTAAGAAAAAGGT 60.181 43.478 0.00 0.00 0.00 3.50
628 1015 3.408634 TGCCTCCGTTCTAAGAAAAAGG 58.591 45.455 0.00 0.00 0.00 3.11
629 1016 5.432885 TTTGCCTCCGTTCTAAGAAAAAG 57.567 39.130 0.00 0.00 0.00 2.27
630 1017 5.838531 TTTTGCCTCCGTTCTAAGAAAAA 57.161 34.783 0.00 0.00 0.00 1.94
631 1018 6.713450 ACTATTTTGCCTCCGTTCTAAGAAAA 59.287 34.615 0.00 0.00 0.00 2.29
632 1019 6.235664 ACTATTTTGCCTCCGTTCTAAGAAA 58.764 36.000 0.00 0.00 0.00 2.52
633 1020 5.801380 ACTATTTTGCCTCCGTTCTAAGAA 58.199 37.500 0.00 0.00 0.00 2.52
634 1021 5.416271 ACTATTTTGCCTCCGTTCTAAGA 57.584 39.130 0.00 0.00 0.00 2.10
635 1022 6.338937 ACTACTATTTTGCCTCCGTTCTAAG 58.661 40.000 0.00 0.00 0.00 2.18
636 1023 6.290294 ACTACTATTTTGCCTCCGTTCTAA 57.710 37.500 0.00 0.00 0.00 2.10
637 1024 5.163478 GGACTACTATTTTGCCTCCGTTCTA 60.163 44.000 0.00 0.00 0.00 2.10
638 1025 4.382793 GGACTACTATTTTGCCTCCGTTCT 60.383 45.833 0.00 0.00 0.00 3.01
639 1026 3.869832 GGACTACTATTTTGCCTCCGTTC 59.130 47.826 0.00 0.00 0.00 3.95
640 1027 3.518303 AGGACTACTATTTTGCCTCCGTT 59.482 43.478 0.00 0.00 0.00 4.44
641 1028 3.105283 AGGACTACTATTTTGCCTCCGT 58.895 45.455 0.00 0.00 0.00 4.69
642 1029 3.821421 AGGACTACTATTTTGCCTCCG 57.179 47.619 0.00 0.00 0.00 4.63
657 1044 6.540438 TCGTTGGTTAATGAGATAAGGACT 57.460 37.500 0.00 0.00 0.00 3.85
669 1056 7.040686 GGCATCCATATAACTTCGTTGGTTAAT 60.041 37.037 0.00 0.00 33.67 1.40
671 1058 5.761234 GGCATCCATATAACTTCGTTGGTTA 59.239 40.000 0.00 0.00 34.32 2.85
673 1060 4.134563 GGCATCCATATAACTTCGTTGGT 58.865 43.478 0.00 0.00 0.00 3.67
694 1101 8.754080 ACTAGAAGTAGCTATAATGCTAATGGG 58.246 37.037 0.00 0.00 45.64 4.00
840 1265 4.033702 GCAGTAGTACCTACGAAAAATGCC 59.966 45.833 0.00 0.00 41.37 4.40
849 1274 7.488187 TTACTAATCTGCAGTAGTACCTACG 57.512 40.000 18.84 1.49 41.37 3.51
948 1382 2.359975 GAAGCACTTGGGACCGGG 60.360 66.667 6.32 0.00 0.00 5.73
962 1396 7.644551 GTCACGAGGTCAGTATTTATAGTGAAG 59.355 40.741 8.47 4.77 42.52 3.02
979 1413 0.469331 TGAAGGACTGGTCACGAGGT 60.469 55.000 3.10 0.00 0.00 3.85
1063 1497 1.581447 GCTAGCAAACACTGGCACC 59.419 57.895 10.63 0.00 43.13 5.01
1066 1500 0.387750 GCTTGCTAGCAAACACTGGC 60.388 55.000 28.95 22.95 46.95 4.85
1216 1660 2.900106 GCCCTTGACTGGAGCAGGT 61.900 63.158 0.00 0.00 35.51 4.00
1420 1886 8.268738 GCAAATTTGTTTTCTTGTCATCAGTAC 58.731 33.333 19.03 0.00 0.00 2.73
1614 2156 2.233271 CACATTTTGTCAGGACCAGCT 58.767 47.619 0.00 0.00 0.00 4.24
1642 2191 0.585519 GCATTTAACCTGCGTACGCG 60.586 55.000 32.65 25.78 45.51 6.01
1703 2256 2.501610 GGGCTCAGGTCGGTGATC 59.498 66.667 0.00 0.00 0.00 2.92
1823 2379 2.988010 TGTACTGCATCCTGATGACC 57.012 50.000 11.23 0.00 41.20 4.02
1858 2414 3.964031 ACTGAAGAGGATCCTATGTGGTC 59.036 47.826 16.16 6.55 37.07 4.02
1896 2460 6.487331 ACATTTACTCCATTGTTTTCCGTGTA 59.513 34.615 0.00 0.00 0.00 2.90
1924 2502 0.107945 GGAACGCCAAGATCAGCTCT 60.108 55.000 0.00 0.00 34.96 4.09
1925 2503 0.107945 AGGAACGCCAAGATCAGCTC 60.108 55.000 0.00 0.00 36.29 4.09
2323 2912 6.539324 CACATTCTTTCTTTTCGCGGTATAA 58.461 36.000 6.13 0.00 0.00 0.98
2324 2913 5.446741 GCACATTCTTTCTTTTCGCGGTATA 60.447 40.000 6.13 0.00 0.00 1.47
2499 3097 1.009389 CGTCTCCTCGGTGACAAAGC 61.009 60.000 15.87 0.00 38.19 3.51
2500 3098 0.596577 TCGTCTCCTCGGTGACAAAG 59.403 55.000 15.87 3.14 38.19 2.77
2501 3099 0.313043 GTCGTCTCCTCGGTGACAAA 59.687 55.000 15.87 3.46 38.19 2.83
2502 3100 0.536687 AGTCGTCTCCTCGGTGACAA 60.537 55.000 15.87 0.00 38.19 3.18
2507 3105 0.250814 AGTTCAGTCGTCTCCTCGGT 60.251 55.000 0.00 0.00 0.00 4.69
2508 3106 0.169230 CAGTTCAGTCGTCTCCTCGG 59.831 60.000 0.00 0.00 0.00 4.63
2520 3118 3.844577 AGCATTTTAGCTGCAGTTCAG 57.155 42.857 16.64 0.63 44.66 3.02
2603 3201 7.201582 CCTTTAATAAGCAAGTAGTAACCGTGG 60.202 40.741 0.00 0.00 0.00 4.94
2608 3206 8.797350 TTCCCCTTTAATAAGCAAGTAGTAAC 57.203 34.615 0.00 0.00 0.00 2.50
2631 3565 6.260050 TCGGTAATTTGCATCCTCTGTAATTC 59.740 38.462 0.00 0.00 29.03 2.17
2638 3572 2.880890 GCATCGGTAATTTGCATCCTCT 59.119 45.455 0.00 0.00 36.40 3.69
2641 3575 2.880890 AGAGCATCGGTAATTTGCATCC 59.119 45.455 2.16 0.00 42.67 3.51
2658 3592 1.817447 ACGGTGTTCCTAGTACAGAGC 59.183 52.381 0.00 0.00 0.00 4.09
2689 3623 2.798148 CTACCGGTGGTTCCCAGTGC 62.798 65.000 19.93 0.00 37.09 4.40
2714 3648 2.541762 GACAGGCGAGCAGAATCAATAC 59.458 50.000 0.00 0.00 0.00 1.89
2744 3684 2.109126 GTGTCATCCTCGGCAAGCC 61.109 63.158 0.00 0.00 0.00 4.35
2853 3795 7.534239 GCTCCTTCATTAAAAGTACTTTCAACG 59.466 37.037 20.78 6.14 31.45 4.10
2892 3834 1.393539 GTGCCTACATGTACGTGCAAG 59.606 52.381 11.22 9.11 0.00 4.01
2896 3838 3.377485 AGAGTAGTGCCTACATGTACGTG 59.623 47.826 13.64 13.64 39.22 4.49
2919 3865 5.901884 CCGAAGATTTTGTACGCATATTCAC 59.098 40.000 6.81 0.00 0.00 3.18
2921 3867 6.044512 ACCGAAGATTTTGTACGCATATTC 57.955 37.500 0.00 0.00 0.00 1.75
2925 3871 3.669557 GCAACCGAAGATTTTGTACGCAT 60.670 43.478 0.00 0.00 0.00 4.73
2947 3893 3.000727 AGCCCTGTTTATCGAAAAGACG 58.999 45.455 0.00 0.00 0.00 4.18
2993 3939 6.003326 CACCATTGTACATGCCCTCATAATA 58.997 40.000 0.00 0.00 0.00 0.98
3001 3947 0.969917 TGCCACCATTGTACATGCCC 60.970 55.000 0.00 0.00 0.00 5.36
3002 3948 1.113788 ATGCCACCATTGTACATGCC 58.886 50.000 0.00 0.00 0.00 4.40
3003 3949 3.305539 CCATATGCCACCATTGTACATGC 60.306 47.826 0.00 0.00 32.85 4.06
3004 3950 4.022935 GTCCATATGCCACCATTGTACATG 60.023 45.833 0.00 0.00 32.85 3.21
3005 3951 4.144297 GTCCATATGCCACCATTGTACAT 58.856 43.478 0.00 0.00 32.85 2.29
3006 3952 3.054065 TGTCCATATGCCACCATTGTACA 60.054 43.478 0.00 0.00 32.85 2.90
3007 3953 3.315191 GTGTCCATATGCCACCATTGTAC 59.685 47.826 10.93 0.00 32.85 2.90
3008 3954 3.054065 TGTGTCCATATGCCACCATTGTA 60.054 43.478 16.55 0.51 32.85 2.41
3009 3955 2.291475 TGTGTCCATATGCCACCATTGT 60.291 45.455 16.55 0.00 32.85 2.71
3010 3956 2.377073 TGTGTCCATATGCCACCATTG 58.623 47.619 16.55 0.00 32.85 2.82
3011 3957 2.824689 TGTGTCCATATGCCACCATT 57.175 45.000 16.55 0.00 32.85 3.16
3012 3958 4.662966 ATATGTGTCCATATGCCACCAT 57.337 40.909 16.55 12.78 41.64 3.55
3020 3966 9.743581 TTTATCATGAAGCATATGTGTCCATAT 57.256 29.630 0.00 0.00 43.54 1.78
3021 3967 9.571816 TTTTATCATGAAGCATATGTGTCCATA 57.428 29.630 0.00 0.00 37.92 2.74
3022 3968 8.467963 TTTTATCATGAAGCATATGTGTCCAT 57.532 30.769 0.00 1.04 34.97 3.41
3023 3969 7.878547 TTTTATCATGAAGCATATGTGTCCA 57.121 32.000 0.00 0.00 0.00 4.02
3024 3970 8.408601 ACTTTTTATCATGAAGCATATGTGTCC 58.591 33.333 0.00 0.00 0.00 4.02
3073 4019 4.262420 GGTAGCTTGCATTGGGAAGAAAAA 60.262 41.667 0.00 0.00 44.46 1.94
3074 4020 3.258123 GGTAGCTTGCATTGGGAAGAAAA 59.742 43.478 0.00 0.00 44.46 2.29
3075 4021 2.825532 GGTAGCTTGCATTGGGAAGAAA 59.174 45.455 0.00 0.00 44.46 2.52
3076 4022 2.224992 TGGTAGCTTGCATTGGGAAGAA 60.225 45.455 0.00 0.00 44.46 2.52
3077 4023 1.354031 TGGTAGCTTGCATTGGGAAGA 59.646 47.619 0.00 0.00 44.46 2.87
3078 4024 1.838112 TGGTAGCTTGCATTGGGAAG 58.162 50.000 0.00 0.00 44.50 3.46
3079 4025 2.530460 ATGGTAGCTTGCATTGGGAA 57.470 45.000 0.00 0.00 0.00 3.97
3080 4026 2.530460 AATGGTAGCTTGCATTGGGA 57.470 45.000 0.00 0.00 0.00 4.37
3081 4027 3.067180 CACTAATGGTAGCTTGCATTGGG 59.933 47.826 0.00 0.00 0.00 4.12
3082 4028 3.067180 CCACTAATGGTAGCTTGCATTGG 59.933 47.826 0.00 0.00 41.64 3.16
3083 4029 4.297299 CCACTAATGGTAGCTTGCATTG 57.703 45.455 0.00 0.00 41.64 2.82
3122 4068 9.372369 GCATGTGTACTAGAGTCTTTATTTTCT 57.628 33.333 0.00 0.00 0.00 2.52
3123 4069 9.151471 TGCATGTGTACTAGAGTCTTTATTTTC 57.849 33.333 0.00 0.00 0.00 2.29
3124 4070 9.672673 ATGCATGTGTACTAGAGTCTTTATTTT 57.327 29.630 0.00 0.00 0.00 1.82
3125 4071 9.319143 GATGCATGTGTACTAGAGTCTTTATTT 57.681 33.333 2.46 0.00 0.00 1.40
3126 4072 8.700051 AGATGCATGTGTACTAGAGTCTTTATT 58.300 33.333 2.46 0.00 0.00 1.40
3127 4073 8.243961 AGATGCATGTGTACTAGAGTCTTTAT 57.756 34.615 2.46 0.00 0.00 1.40
3128 4074 7.646548 AGATGCATGTGTACTAGAGTCTTTA 57.353 36.000 2.46 0.00 0.00 1.85
3129 4075 6.537453 AGATGCATGTGTACTAGAGTCTTT 57.463 37.500 2.46 0.00 0.00 2.52
3130 4076 6.537453 AAGATGCATGTGTACTAGAGTCTT 57.463 37.500 2.46 0.00 0.00 3.01
3131 4077 6.537453 AAAGATGCATGTGTACTAGAGTCT 57.463 37.500 2.46 0.00 0.00 3.24
3132 4078 7.484975 AGTAAAGATGCATGTGTACTAGAGTC 58.515 38.462 21.96 0.00 0.00 3.36
3133 4079 7.411486 AGTAAAGATGCATGTGTACTAGAGT 57.589 36.000 21.96 1.56 0.00 3.24
3134 4080 8.709386 AAAGTAAAGATGCATGTGTACTAGAG 57.291 34.615 23.17 0.00 0.00 2.43
3135 4081 8.311109 TGAAAGTAAAGATGCATGTGTACTAGA 58.689 33.333 23.17 10.24 0.00 2.43
3136 4082 8.383619 GTGAAAGTAAAGATGCATGTGTACTAG 58.616 37.037 23.17 0.00 0.00 2.57
3137 4083 8.094548 AGTGAAAGTAAAGATGCATGTGTACTA 58.905 33.333 23.17 8.67 0.00 1.82
3138 4084 6.936900 AGTGAAAGTAAAGATGCATGTGTACT 59.063 34.615 18.65 18.65 0.00 2.73
3139 4085 7.133891 AGTGAAAGTAAAGATGCATGTGTAC 57.866 36.000 14.87 14.87 0.00 2.90
3140 4086 7.443879 TGAAGTGAAAGTAAAGATGCATGTGTA 59.556 33.333 2.46 0.00 0.00 2.90
3141 4087 6.262944 TGAAGTGAAAGTAAAGATGCATGTGT 59.737 34.615 2.46 0.00 0.00 3.72
3142 4088 6.671190 TGAAGTGAAAGTAAAGATGCATGTG 58.329 36.000 2.46 0.00 0.00 3.21
3143 4089 6.882610 TGAAGTGAAAGTAAAGATGCATGT 57.117 33.333 2.46 0.00 0.00 3.21
3144 4090 8.242053 AGATTGAAGTGAAAGTAAAGATGCATG 58.758 33.333 2.46 0.00 0.00 4.06
3145 4091 8.345724 AGATTGAAGTGAAAGTAAAGATGCAT 57.654 30.769 0.00 0.00 0.00 3.96
3146 4092 7.750229 AGATTGAAGTGAAAGTAAAGATGCA 57.250 32.000 0.00 0.00 0.00 3.96
3147 4093 9.468532 AAAAGATTGAAGTGAAAGTAAAGATGC 57.531 29.630 0.00 0.00 0.00 3.91
3151 4097 8.962111 GCTGAAAAGATTGAAGTGAAAGTAAAG 58.038 33.333 0.00 0.00 0.00 1.85
3152 4098 8.686334 AGCTGAAAAGATTGAAGTGAAAGTAAA 58.314 29.630 0.00 0.00 0.00 2.01
3153 4099 8.225603 AGCTGAAAAGATTGAAGTGAAAGTAA 57.774 30.769 0.00 0.00 0.00 2.24
3154 4100 7.807977 AGCTGAAAAGATTGAAGTGAAAGTA 57.192 32.000 0.00 0.00 0.00 2.24
3155 4101 6.705863 AGCTGAAAAGATTGAAGTGAAAGT 57.294 33.333 0.00 0.00 0.00 2.66
3156 4102 7.998753 AAAGCTGAAAAGATTGAAGTGAAAG 57.001 32.000 0.00 0.00 0.00 2.62
3157 4103 7.818930 ACAAAAGCTGAAAAGATTGAAGTGAAA 59.181 29.630 0.00 0.00 0.00 2.69
3158 4104 7.322664 ACAAAAGCTGAAAAGATTGAAGTGAA 58.677 30.769 0.00 0.00 0.00 3.18
3159 4105 6.866480 ACAAAAGCTGAAAAGATTGAAGTGA 58.134 32.000 0.00 0.00 0.00 3.41
3160 4106 6.753279 TGACAAAAGCTGAAAAGATTGAAGTG 59.247 34.615 0.00 0.00 0.00 3.16
3161 4107 6.866480 TGACAAAAGCTGAAAAGATTGAAGT 58.134 32.000 0.00 0.00 0.00 3.01
3162 4108 7.149015 CGATGACAAAAGCTGAAAAGATTGAAG 60.149 37.037 0.00 0.00 0.00 3.02
3163 4109 6.638063 CGATGACAAAAGCTGAAAAGATTGAA 59.362 34.615 0.00 0.00 0.00 2.69
3164 4110 6.144854 CGATGACAAAAGCTGAAAAGATTGA 58.855 36.000 0.00 0.00 0.00 2.57
3165 4111 5.344128 CCGATGACAAAAGCTGAAAAGATTG 59.656 40.000 0.00 0.00 0.00 2.67
3166 4112 5.241506 TCCGATGACAAAAGCTGAAAAGATT 59.758 36.000 0.00 0.00 0.00 2.40
3167 4113 4.761739 TCCGATGACAAAAGCTGAAAAGAT 59.238 37.500 0.00 0.00 0.00 2.40
3168 4114 4.024048 GTCCGATGACAAAAGCTGAAAAGA 60.024 41.667 0.00 0.00 41.37 2.52
3169 4115 4.222114 GTCCGATGACAAAAGCTGAAAAG 58.778 43.478 0.00 0.00 41.37 2.27
3170 4116 3.004315 GGTCCGATGACAAAAGCTGAAAA 59.996 43.478 0.00 0.00 43.65 2.29
3171 4117 2.552315 GGTCCGATGACAAAAGCTGAAA 59.448 45.455 0.00 0.00 43.65 2.69
3172 4118 2.151202 GGTCCGATGACAAAAGCTGAA 58.849 47.619 0.00 0.00 43.65 3.02
3173 4119 1.071542 TGGTCCGATGACAAAAGCTGA 59.928 47.619 0.00 0.00 43.65 4.26
3174 4120 1.197721 GTGGTCCGATGACAAAAGCTG 59.802 52.381 0.00 0.00 43.65 4.24
3175 4121 1.202758 TGTGGTCCGATGACAAAAGCT 60.203 47.619 0.00 0.00 43.65 3.74
3176 4122 1.069227 GTGTGGTCCGATGACAAAAGC 60.069 52.381 0.00 0.00 43.65 3.51
3177 4123 1.535462 GGTGTGGTCCGATGACAAAAG 59.465 52.381 0.00 0.00 43.65 2.27
3178 4124 1.142060 AGGTGTGGTCCGATGACAAAA 59.858 47.619 0.00 0.00 43.65 2.44
3179 4125 0.762418 AGGTGTGGTCCGATGACAAA 59.238 50.000 0.00 0.00 43.65 2.83
3180 4126 0.762418 AAGGTGTGGTCCGATGACAA 59.238 50.000 0.00 0.00 43.65 3.18
3181 4127 0.762418 AAAGGTGTGGTCCGATGACA 59.238 50.000 0.00 0.00 43.65 3.58
3182 4128 1.804748 GAAAAGGTGTGGTCCGATGAC 59.195 52.381 0.00 0.00 40.98 3.06
3183 4129 1.697432 AGAAAAGGTGTGGTCCGATGA 59.303 47.619 0.00 0.00 0.00 2.92
3184 4130 2.076863 GAGAAAAGGTGTGGTCCGATG 58.923 52.381 0.00 0.00 0.00 3.84
3185 4131 1.978580 AGAGAAAAGGTGTGGTCCGAT 59.021 47.619 0.00 0.00 0.00 4.18
3186 4132 1.420430 AGAGAAAAGGTGTGGTCCGA 58.580 50.000 0.00 0.00 0.00 4.55
3187 4133 2.143925 GAAGAGAAAAGGTGTGGTCCG 58.856 52.381 0.00 0.00 0.00 4.79
3188 4134 3.208747 TGAAGAGAAAAGGTGTGGTCC 57.791 47.619 0.00 0.00 0.00 4.46
3189 4135 3.315470 GGTTGAAGAGAAAAGGTGTGGTC 59.685 47.826 0.00 0.00 0.00 4.02
3190 4136 3.288092 GGTTGAAGAGAAAAGGTGTGGT 58.712 45.455 0.00 0.00 0.00 4.16
3191 4137 3.066760 GTGGTTGAAGAGAAAAGGTGTGG 59.933 47.826 0.00 0.00 0.00 4.17
3192 4138 3.066760 GGTGGTTGAAGAGAAAAGGTGTG 59.933 47.826 0.00 0.00 0.00 3.82
3193 4139 3.288092 GGTGGTTGAAGAGAAAAGGTGT 58.712 45.455 0.00 0.00 0.00 4.16
3194 4140 2.623416 GGGTGGTTGAAGAGAAAAGGTG 59.377 50.000 0.00 0.00 0.00 4.00
3195 4141 2.748465 CGGGTGGTTGAAGAGAAAAGGT 60.748 50.000 0.00 0.00 0.00 3.50
3196 4142 1.880027 CGGGTGGTTGAAGAGAAAAGG 59.120 52.381 0.00 0.00 0.00 3.11
3197 4143 1.266989 GCGGGTGGTTGAAGAGAAAAG 59.733 52.381 0.00 0.00 0.00 2.27
3198 4144 1.314730 GCGGGTGGTTGAAGAGAAAA 58.685 50.000 0.00 0.00 0.00 2.29
3199 4145 0.536460 GGCGGGTGGTTGAAGAGAAA 60.536 55.000 0.00 0.00 0.00 2.52
3200 4146 1.072505 GGCGGGTGGTTGAAGAGAA 59.927 57.895 0.00 0.00 0.00 2.87
3201 4147 1.827399 GAGGCGGGTGGTTGAAGAGA 61.827 60.000 0.00 0.00 0.00 3.10
3202 4148 1.376037 GAGGCGGGTGGTTGAAGAG 60.376 63.158 0.00 0.00 0.00 2.85
3203 4149 2.747686 GAGGCGGGTGGTTGAAGA 59.252 61.111 0.00 0.00 0.00 2.87
3204 4150 2.359975 GGAGGCGGGTGGTTGAAG 60.360 66.667 0.00 0.00 0.00 3.02
3205 4151 2.852075 AGGAGGCGGGTGGTTGAA 60.852 61.111 0.00 0.00 0.00 2.69
3206 4152 3.636231 CAGGAGGCGGGTGGTTGA 61.636 66.667 0.00 0.00 0.00 3.18
3207 4153 4.722700 CCAGGAGGCGGGTGGTTG 62.723 72.222 0.00 0.00 0.00 3.77
3208 4154 4.974438 TCCAGGAGGCGGGTGGTT 62.974 66.667 0.00 0.00 32.73 3.67
3211 4157 3.465403 CTCTCCAGGAGGCGGGTG 61.465 72.222 17.10 0.00 38.35 4.61
3220 4166 1.753368 GAAGCGGGATCCTCTCCAGG 61.753 65.000 12.58 0.00 46.98 4.45
3221 4167 1.745264 GAAGCGGGATCCTCTCCAG 59.255 63.158 12.58 0.00 46.98 3.86
3222 4168 1.762460 GGAAGCGGGATCCTCTCCA 60.762 63.158 12.58 0.00 46.98 3.86
3223 4169 2.512355 GGGAAGCGGGATCCTCTCC 61.512 68.421 12.58 11.82 44.11 3.71
3224 4170 0.178958 TAGGGAAGCGGGATCCTCTC 60.179 60.000 12.58 0.44 37.14 3.20
3225 4171 0.489567 ATAGGGAAGCGGGATCCTCT 59.510 55.000 12.58 6.48 37.14 3.69
3226 4172 0.899019 GATAGGGAAGCGGGATCCTC 59.101 60.000 12.58 4.01 37.14 3.71
3227 4173 0.489567 AGATAGGGAAGCGGGATCCT 59.510 55.000 12.58 0.00 37.14 3.24
3228 4174 0.610687 CAGATAGGGAAGCGGGATCC 59.389 60.000 1.92 1.92 36.16 3.36
3229 4175 1.633774 TCAGATAGGGAAGCGGGATC 58.366 55.000 0.00 0.00 0.00 3.36
3230 4176 1.694696 GTTCAGATAGGGAAGCGGGAT 59.305 52.381 0.00 0.00 0.00 3.85
3231 4177 1.120530 GTTCAGATAGGGAAGCGGGA 58.879 55.000 0.00 0.00 0.00 5.14
3232 4178 0.106894 GGTTCAGATAGGGAAGCGGG 59.893 60.000 0.00 0.00 33.69 6.13
3233 4179 1.123928 AGGTTCAGATAGGGAAGCGG 58.876 55.000 0.00 0.00 44.97 5.52
3234 4180 2.959707 AGTAGGTTCAGATAGGGAAGCG 59.040 50.000 0.00 0.00 44.97 4.68
3235 4181 5.360649 AAAGTAGGTTCAGATAGGGAAGC 57.639 43.478 0.00 0.00 41.72 3.86
3236 4182 6.096564 ACGTAAAGTAGGTTCAGATAGGGAAG 59.903 42.308 0.00 0.00 0.00 3.46
3237 4183 5.954150 ACGTAAAGTAGGTTCAGATAGGGAA 59.046 40.000 0.00 0.00 0.00 3.97
3238 4184 5.513233 ACGTAAAGTAGGTTCAGATAGGGA 58.487 41.667 0.00 0.00 0.00 4.20
3239 4185 5.359009 TGACGTAAAGTAGGTTCAGATAGGG 59.641 44.000 0.00 0.00 0.00 3.53
3240 4186 6.446781 TGACGTAAAGTAGGTTCAGATAGG 57.553 41.667 0.00 0.00 0.00 2.57
3241 4187 9.828852 GATATGACGTAAAGTAGGTTCAGATAG 57.171 37.037 0.00 0.00 0.00 2.08
3242 4188 8.790718 GGATATGACGTAAAGTAGGTTCAGATA 58.209 37.037 0.00 0.00 0.00 1.98
3243 4189 7.521748 CGGATATGACGTAAAGTAGGTTCAGAT 60.522 40.741 0.00 0.00 0.00 2.90
3244 4190 6.238566 CGGATATGACGTAAAGTAGGTTCAGA 60.239 42.308 0.00 0.00 0.00 3.27
3245 4191 5.913514 CGGATATGACGTAAAGTAGGTTCAG 59.086 44.000 0.00 0.00 0.00 3.02
3246 4192 5.589855 TCGGATATGACGTAAAGTAGGTTCA 59.410 40.000 0.00 0.00 0.00 3.18
3247 4193 6.064846 TCGGATATGACGTAAAGTAGGTTC 57.935 41.667 0.00 0.00 0.00 3.62
3248 4194 6.294397 GGATCGGATATGACGTAAAGTAGGTT 60.294 42.308 0.00 0.00 0.00 3.50
3249 4195 5.182760 GGATCGGATATGACGTAAAGTAGGT 59.817 44.000 0.00 0.00 0.00 3.08
3250 4196 5.415077 AGGATCGGATATGACGTAAAGTAGG 59.585 44.000 0.00 0.00 0.00 3.18
3251 4197 6.497785 AGGATCGGATATGACGTAAAGTAG 57.502 41.667 0.00 0.00 0.00 2.57
3252 4198 6.936335 TGTAGGATCGGATATGACGTAAAGTA 59.064 38.462 0.00 0.00 0.00 2.24
3253 4199 5.766670 TGTAGGATCGGATATGACGTAAAGT 59.233 40.000 0.00 0.00 0.00 2.66
3254 4200 6.250344 TGTAGGATCGGATATGACGTAAAG 57.750 41.667 0.00 0.00 0.00 1.85
3255 4201 6.349860 CCATGTAGGATCGGATATGACGTAAA 60.350 42.308 0.00 0.00 41.22 2.01
3256 4202 5.124936 CCATGTAGGATCGGATATGACGTAA 59.875 44.000 0.00 0.00 41.22 3.18
3257 4203 4.638865 CCATGTAGGATCGGATATGACGTA 59.361 45.833 0.00 0.00 41.22 3.57
3258 4204 3.444034 CCATGTAGGATCGGATATGACGT 59.556 47.826 0.00 0.00 41.22 4.34
3259 4205 3.735208 GCCATGTAGGATCGGATATGACG 60.735 52.174 0.00 0.00 41.22 4.35
3260 4206 3.195610 TGCCATGTAGGATCGGATATGAC 59.804 47.826 0.00 0.00 41.22 3.06
3261 4207 3.440127 TGCCATGTAGGATCGGATATGA 58.560 45.455 0.00 0.00 41.22 2.15
3262 4208 3.893326 TGCCATGTAGGATCGGATATG 57.107 47.619 0.00 0.00 41.22 1.78
3263 4209 3.432749 GCATGCCATGTAGGATCGGATAT 60.433 47.826 6.36 0.00 41.22 1.63
3264 4210 2.093500 GCATGCCATGTAGGATCGGATA 60.093 50.000 6.36 0.00 41.22 2.59
3265 4211 1.339438 GCATGCCATGTAGGATCGGAT 60.339 52.381 6.36 0.00 41.22 4.18
3266 4212 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55
3267 4213 1.293963 CGCATGCCATGTAGGATCGG 61.294 60.000 13.15 0.00 41.22 4.18
3268 4214 0.319813 TCGCATGCCATGTAGGATCG 60.320 55.000 13.15 0.23 41.22 3.69
3269 4215 1.001293 TCTCGCATGCCATGTAGGATC 59.999 52.381 13.15 0.00 41.22 3.36
3270 4216 1.051008 TCTCGCATGCCATGTAGGAT 58.949 50.000 13.15 0.00 41.22 3.24
3271 4217 0.104855 GTCTCGCATGCCATGTAGGA 59.895 55.000 13.15 0.14 41.22 2.94
3272 4218 0.179076 TGTCTCGCATGCCATGTAGG 60.179 55.000 13.15 0.00 41.84 3.18
3273 4219 1.797046 GATGTCTCGCATGCCATGTAG 59.203 52.381 13.15 4.83 38.06 2.74
3274 4220 1.138661 TGATGTCTCGCATGCCATGTA 59.861 47.619 13.15 0.00 38.06 2.29
3275 4221 0.107557 TGATGTCTCGCATGCCATGT 60.108 50.000 13.15 0.00 38.06 3.21
3276 4222 0.306840 GTGATGTCTCGCATGCCATG 59.693 55.000 13.15 0.00 38.06 3.66
3277 4223 0.816825 GGTGATGTCTCGCATGCCAT 60.817 55.000 13.15 9.58 38.06 4.40
3278 4224 1.450134 GGTGATGTCTCGCATGCCA 60.450 57.895 13.15 4.25 38.06 4.92
3279 4225 0.745845 AAGGTGATGTCTCGCATGCC 60.746 55.000 13.15 0.00 38.06 4.40
3280 4226 1.939974 TAAGGTGATGTCTCGCATGC 58.060 50.000 7.91 7.91 38.06 4.06
3281 4227 2.868583 CCTTAAGGTGATGTCTCGCATG 59.131 50.000 13.83 0.00 38.06 4.06
3282 4228 2.743183 GCCTTAAGGTGATGTCTCGCAT 60.743 50.000 22.55 0.00 37.82 4.73
3283 4229 1.405526 GCCTTAAGGTGATGTCTCGCA 60.406 52.381 22.55 0.00 37.57 5.10
3284 4230 1.134670 AGCCTTAAGGTGATGTCTCGC 60.135 52.381 22.55 4.29 37.57 5.03
3285 4231 2.969628 AGCCTTAAGGTGATGTCTCG 57.030 50.000 22.55 0.00 37.57 4.04
3286 4232 4.061596 GCATAGCCTTAAGGTGATGTCTC 58.938 47.826 25.95 14.10 37.57 3.36
3287 4233 3.455910 TGCATAGCCTTAAGGTGATGTCT 59.544 43.478 25.95 16.43 37.57 3.41
3288 4234 3.808728 TGCATAGCCTTAAGGTGATGTC 58.191 45.455 25.95 20.86 37.57 3.06
3289 4235 3.931907 TGCATAGCCTTAAGGTGATGT 57.068 42.857 25.95 11.27 37.57 3.06
3290 4236 4.581824 ACAATGCATAGCCTTAAGGTGATG 59.418 41.667 22.55 23.06 37.57 3.07
3291 4237 4.581824 CACAATGCATAGCCTTAAGGTGAT 59.418 41.667 22.55 13.04 37.57 3.06
3292 4238 3.947196 CACAATGCATAGCCTTAAGGTGA 59.053 43.478 22.55 11.29 37.57 4.02
3293 4239 3.489738 GCACAATGCATAGCCTTAAGGTG 60.490 47.826 22.55 13.99 44.26 4.00
3294 4240 2.689983 GCACAATGCATAGCCTTAAGGT 59.310 45.455 22.55 11.85 44.26 3.50
3295 4241 3.360249 GCACAATGCATAGCCTTAAGG 57.640 47.619 17.81 17.81 44.26 2.69
3308 4254 0.892755 AGTTCAGGGCATGCACAATG 59.107 50.000 24.51 13.14 39.49 2.82
3309 4255 0.892755 CAGTTCAGGGCATGCACAAT 59.107 50.000 24.51 0.00 0.00 2.71
3310 4256 1.180456 CCAGTTCAGGGCATGCACAA 61.180 55.000 24.51 5.52 0.00 3.33
3311 4257 1.604308 CCAGTTCAGGGCATGCACA 60.604 57.895 24.51 0.00 0.00 4.57
3312 4258 0.682209 ATCCAGTTCAGGGCATGCAC 60.682 55.000 21.36 17.78 0.00 4.57
3313 4259 0.918258 TATCCAGTTCAGGGCATGCA 59.082 50.000 21.36 0.00 0.00 3.96
3314 4260 1.602311 CTATCCAGTTCAGGGCATGC 58.398 55.000 9.90 9.90 0.00 4.06
3315 4261 1.602311 GCTATCCAGTTCAGGGCATG 58.398 55.000 0.00 0.00 0.00 4.06
3316 4262 0.107456 CGCTATCCAGTTCAGGGCAT 59.893 55.000 0.00 0.00 0.00 4.40
3317 4263 1.522092 CGCTATCCAGTTCAGGGCA 59.478 57.895 0.00 0.00 0.00 5.36
3318 4264 1.227674 CCGCTATCCAGTTCAGGGC 60.228 63.158 0.00 0.00 0.00 5.19
3319 4265 1.227674 GCCGCTATCCAGTTCAGGG 60.228 63.158 0.00 0.00 0.00 4.45
3320 4266 1.227674 GGCCGCTATCCAGTTCAGG 60.228 63.158 0.00 0.00 0.00 3.86
3321 4267 0.531532 CTGGCCGCTATCCAGTTCAG 60.532 60.000 0.00 0.00 44.62 3.02
3322 4268 1.522092 CTGGCCGCTATCCAGTTCA 59.478 57.895 0.00 0.00 44.62 3.18
3323 4269 4.445699 CTGGCCGCTATCCAGTTC 57.554 61.111 0.00 0.00 44.62 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.