Multiple sequence alignment - TraesCS6A01G247700
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS6A01G247700
chr6A
100.000
4180
0
0
1
4180
459847976
459843797
0.000000e+00
7720.0
1
TraesCS6A01G247700
chr6B
92.859
3725
138
46
34
3690
501106028
501109692
0.000000e+00
5288.0
2
TraesCS6A01G247700
chr6B
85.477
482
60
7
3705
4180
120834313
120833836
1.040000e-135
494.0
3
TraesCS6A01G247700
chr6D
92.089
1441
92
17
2230
3662
322456837
322455411
0.000000e+00
2010.0
4
TraesCS6A01G247700
chr6D
96.472
652
20
3
799
1449
322458220
322457571
0.000000e+00
1074.0
5
TraesCS6A01G247700
chr6D
97.381
611
14
2
1446
2054
322457513
322456903
0.000000e+00
1038.0
6
TraesCS6A01G247700
chr6D
90.194
775
47
11
1
769
322459442
322458691
0.000000e+00
983.0
7
TraesCS6A01G247700
chr4D
87.400
500
51
9
3688
4180
405474378
405474872
7.850000e-157
564.0
8
TraesCS6A01G247700
chr3D
87.045
494
59
4
3690
4180
611548126
611548617
1.700000e-153
553.0
9
TraesCS6A01G247700
chr2D
86.774
499
60
3
3685
4180
8003666
8003171
6.110000e-153
551.0
10
TraesCS6A01G247700
chr2D
85.400
500
67
4
3685
4180
624100835
624100338
8.010000e-142
514.0
11
TraesCS6A01G247700
chr2D
96.525
259
9
0
2354
2612
79386508
79386250
2.990000e-116
429.0
12
TraesCS6A01G247700
chr2D
90.909
275
13
2
2063
2335
79386867
79386603
3.970000e-95
359.0
13
TraesCS6A01G247700
chr7D
86.364
506
58
7
3680
4180
154401885
154401386
3.680000e-150
542.0
14
TraesCS6A01G247700
chr7A
86.640
494
59
5
3690
4180
8526758
8527247
1.320000e-149
540.0
15
TraesCS6A01G247700
chr7B
86.983
484
56
5
3692
4170
581382151
581381670
4.760000e-149
538.0
16
TraesCS6A01G247700
chr7B
93.023
43
1
2
2183
2223
213457691
213457649
1.250000e-05
62.1
17
TraesCS6A01G247700
chr5B
85.425
494
65
5
3690
4180
600640079
600639590
1.340000e-139
507.0
18
TraesCS6A01G247700
chr4A
100.000
37
0
0
2185
2221
739735420
739735384
7.500000e-08
69.4
19
TraesCS6A01G247700
chr4A
100.000
37
0
0
2185
2221
742131915
742131879
7.500000e-08
69.4
20
TraesCS6A01G247700
chr3A
95.122
41
2
0
2183
2223
71515857
71515897
9.700000e-07
65.8
21
TraesCS6A01G247700
chr1B
97.436
39
0
1
2184
2222
57002557
57002520
9.700000e-07
65.8
22
TraesCS6A01G247700
chr1A
97.436
39
0
1
2184
2222
36568617
36568580
9.700000e-07
65.8
23
TraesCS6A01G247700
chr2A
94.872
39
1
1
2185
2223
607487770
607487807
4.510000e-05
60.2
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS6A01G247700
chr6A
459843797
459847976
4179
True
7720.00
7720
100.000
1
4180
1
chr6A.!!$R1
4179
1
TraesCS6A01G247700
chr6B
501106028
501109692
3664
False
5288.00
5288
92.859
34
3690
1
chr6B.!!$F1
3656
2
TraesCS6A01G247700
chr6D
322455411
322459442
4031
True
1276.25
2010
94.034
1
3662
4
chr6D.!!$R1
3661
3
TraesCS6A01G247700
chr2D
79386250
79386867
617
True
394.00
429
93.717
2063
2612
2
chr2D.!!$R3
549
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
911
1389
0.170561
CGACGTTCTTGGATCGTCCT
59.829
55.0
18.84
0.0
45.87
3.85
F
1580
2121
0.179073
CGTCATAGTGCAGGAAGGGG
60.179
60.0
0.00
0.0
0.00
4.79
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2829
3458
1.267121
GGCAGGAGTTACCAGACTGA
58.733
55.0
3.32
0.0
42.04
3.41
R
3477
4107
0.895100
GCAGCAGGTGGTGGAATCAA
60.895
55.0
10.97
0.0
43.24
2.57
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
100
101
8.127327
GGTAGAATTCATGTGTTTGATCAGATG
58.873
37.037
8.44
0.00
39.44
2.90
141
142
2.022129
CTCACGGACTCGCAACCAC
61.022
63.158
0.00
0.00
40.63
4.16
257
260
7.489113
AGTCGATCATTTTTCATGGCAAATTAC
59.511
33.333
0.00
0.00
0.00
1.89
263
266
9.716531
TCATTTTTCATGGCAAATTACATTACA
57.283
25.926
0.00
0.00
0.00
2.41
268
271
7.094508
TCATGGCAAATTACATTACATTCGT
57.905
32.000
0.00
0.00
0.00
3.85
269
272
7.192913
TCATGGCAAATTACATTACATTCGTC
58.807
34.615
0.00
0.00
0.00
4.20
270
273
5.885881
TGGCAAATTACATTACATTCGTCC
58.114
37.500
0.00
0.00
0.00
4.79
271
274
5.416013
TGGCAAATTACATTACATTCGTCCA
59.584
36.000
0.00
0.00
0.00
4.02
272
275
5.971202
GGCAAATTACATTACATTCGTCCAG
59.029
40.000
0.00
0.00
0.00
3.86
273
276
5.971202
GCAAATTACATTACATTCGTCCAGG
59.029
40.000
0.00
0.00
0.00
4.45
274
277
6.494842
CAAATTACATTACATTCGTCCAGGG
58.505
40.000
0.00
0.00
0.00
4.45
278
281
3.199946
ACATTACATTCGTCCAGGGTGAT
59.800
43.478
0.00
0.00
0.00
3.06
290
293
5.878116
CGTCCAGGGTGATAAATTTAGTTGA
59.122
40.000
3.94
0.00
0.00
3.18
291
294
6.183360
CGTCCAGGGTGATAAATTTAGTTGAC
60.183
42.308
3.94
0.00
0.00
3.18
308
312
1.206132
TGACGAGTATGGCAAATCCGT
59.794
47.619
7.80
7.80
37.80
4.69
324
344
6.512741
GCAAATCCGTCTCAGTTTAACAGAAA
60.513
38.462
0.00
0.00
0.00
2.52
329
349
7.211573
TCCGTCTCAGTTTAACAGAAATTGTA
58.788
34.615
0.00
0.00
39.73
2.41
414
440
7.666623
AGTTGTTAATGTTATGAAAAGGTGGG
58.333
34.615
0.00
0.00
0.00
4.61
450
476
1.003696
GAGTTGGAGAGGACAAAGGGG
59.996
57.143
0.00
0.00
0.00
4.79
460
486
4.355287
AGAGGACAAAGGGGAAGAAAAGAT
59.645
41.667
0.00
0.00
0.00
2.40
631
657
2.891580
GGAACCAAGAAAGAAGAACCCC
59.108
50.000
0.00
0.00
0.00
4.95
632
658
2.271944
ACCAAGAAAGAAGAACCCCG
57.728
50.000
0.00
0.00
0.00
5.73
633
659
1.202891
ACCAAGAAAGAAGAACCCCGG
60.203
52.381
0.00
0.00
0.00
5.73
634
660
1.073284
CCAAGAAAGAAGAACCCCGGA
59.927
52.381
0.73
0.00
0.00
5.14
635
661
2.290960
CCAAGAAAGAAGAACCCCGGAT
60.291
50.000
0.73
0.00
0.00
4.18
636
662
3.421844
CAAGAAAGAAGAACCCCGGATT
58.578
45.455
0.73
0.00
0.00
3.01
666
701
1.103398
CAACCGCTCCCAATCCATCC
61.103
60.000
0.00
0.00
0.00
3.51
667
702
1.570857
AACCGCTCCCAATCCATCCA
61.571
55.000
0.00
0.00
0.00
3.41
668
703
1.355718
ACCGCTCCCAATCCATCCAT
61.356
55.000
0.00
0.00
0.00
3.41
669
704
0.607489
CCGCTCCCAATCCATCCATC
60.607
60.000
0.00
0.00
0.00
3.51
741
777
3.390311
TCCATCCATCAATCCTCTGTCTG
59.610
47.826
0.00
0.00
0.00
3.51
762
798
2.193248
CAGCCCGAATTCCTCCCC
59.807
66.667
0.00
0.00
0.00
4.81
766
802
1.384643
CCCGAATTCCTCCCCTCCT
60.385
63.158
0.00
0.00
0.00
3.69
772
830
1.167943
ATTCCTCCCCTCCTCCGATA
58.832
55.000
0.00
0.00
0.00
2.92
794
852
2.041922
CCCTCTCCCCCATCGACA
60.042
66.667
0.00
0.00
0.00
4.35
911
1389
0.170561
CGACGTTCTTGGATCGTCCT
59.829
55.000
18.84
0.00
45.87
3.85
912
1390
1.794437
CGACGTTCTTGGATCGTCCTC
60.794
57.143
18.84
3.34
45.87
3.71
937
1415
2.668212
TGCCGGCGAGTGAAAAGG
60.668
61.111
23.90
0.00
0.00
3.11
997
1475
2.895865
TCGTTTCGTTTGCCGGCA
60.896
55.556
29.03
29.03
37.11
5.69
1287
1765
2.840038
TGCAGTGTGATATTCTGGAGGT
59.160
45.455
0.00
0.00
0.00
3.85
1339
1817
3.446873
TCAATGTGCAGGTGAAAACAACT
59.553
39.130
0.00
0.00
0.00
3.16
1345
1823
2.035449
GCAGGTGAAAACAACTAACCCC
59.965
50.000
0.00
0.00
0.00
4.95
1466
2005
3.159213
ACTTGATTGGTTGATGAGCCA
57.841
42.857
0.00
0.00
0.00
4.75
1580
2121
0.179073
CGTCATAGTGCAGGAAGGGG
60.179
60.000
0.00
0.00
0.00
4.79
1633
2174
4.704833
TCTTGCAGCACCCGAGGC
62.705
66.667
0.00
0.00
0.00
4.70
1665
2206
4.518590
TGGATGTTGATTGATTGTGTCGTT
59.481
37.500
0.00
0.00
0.00
3.85
1671
2212
4.596097
TGATTGATTGTGTCGTTTGTGTG
58.404
39.130
0.00
0.00
0.00
3.82
1673
2214
3.942539
TGATTGTGTCGTTTGTGTGAG
57.057
42.857
0.00
0.00
0.00
3.51
1691
2232
5.639506
GTGTGAGCTGTAATGTGAGTGTTAT
59.360
40.000
0.00
0.00
0.00
1.89
2041
2582
3.498927
ACAGCATTGCTATGTTCTTGC
57.501
42.857
11.55
0.00
36.40
4.01
2224
2767
5.417894
TCCGATCCATATTACTTGTCGCTAT
59.582
40.000
0.00
0.00
0.00
2.97
2305
2854
4.523083
TCTTGCCATGTAACCTACCAATC
58.477
43.478
0.00
0.00
0.00
2.67
2499
3124
5.123820
TCCCGAGCAAATTTATGTTTCTGAG
59.876
40.000
0.00
0.00
0.00
3.35
2779
3408
5.359576
TGGGTAAATCTTGATGTGTATTGCC
59.640
40.000
0.00
0.00
0.00
4.52
2820
3449
8.642020
GCAGACATAACTAATTTTGCAAGAAAG
58.358
33.333
0.00
0.20
0.00
2.62
2829
3458
8.860088
ACTAATTTTGCAAGAAAGTAACCTGAT
58.140
29.630
0.00
0.00
0.00
2.90
2869
3498
7.328404
TGCCAAACCTGATATAATATCTCCA
57.672
36.000
0.00
0.00
0.00
3.86
2929
3558
6.890605
GTTGACAGGAGTTCTGCCAAAAGAA
61.891
44.000
1.15
0.00
45.13
2.52
2990
3619
7.971183
AAAAGTTAACTTGTTTGCTTTTCCA
57.029
28.000
21.22
0.00
36.12
3.53
3190
3819
4.007659
CGGAAGGTTTAGCCACAAATAGT
58.992
43.478
0.00
0.00
40.61
2.12
3222
3851
1.204467
CATATGGTTTTGCGGCTTGGT
59.796
47.619
0.00
0.00
0.00
3.67
3271
3900
8.010733
TGTTTTGGATGATTTTTCTCTTCTGT
57.989
30.769
0.00
0.00
0.00
3.41
3272
3901
8.477256
TGTTTTGGATGATTTTTCTCTTCTGTT
58.523
29.630
0.00
0.00
0.00
3.16
3507
4137
1.068055
CACCTGCTGCAATCTGTTTCC
60.068
52.381
3.02
0.00
0.00
3.13
3525
4155
4.986054
TTCCTTAACCTCCTGCTTGTAA
57.014
40.909
0.00
0.00
0.00
2.41
3527
4157
3.263425
TCCTTAACCTCCTGCTTGTAAGG
59.737
47.826
0.00
0.00
35.42
2.69
3541
4171
5.205565
GCTTGTAAGGAAAGAAAACTGACG
58.794
41.667
0.00
0.00
0.00
4.35
3554
4184
8.873215
AAGAAAACTGACGGTGATATAGTATG
57.127
34.615
0.00
0.00
0.00
2.39
3556
4186
4.785511
ACTGACGGTGATATAGTATGCC
57.214
45.455
0.00
0.00
0.00
4.40
3674
4308
1.202746
CCTAGAATCTCTGCTTGGGGC
60.203
57.143
0.00
0.00
42.22
5.80
3690
4327
2.890311
TGGGGCGCCATTCAATATTTAG
59.110
45.455
30.85
0.00
0.00
1.85
3691
4328
3.153919
GGGGCGCCATTCAATATTTAGA
58.846
45.455
30.85
0.00
0.00
2.10
3692
4329
3.191371
GGGGCGCCATTCAATATTTAGAG
59.809
47.826
30.85
0.00
0.00
2.43
3693
4330
3.366374
GGGCGCCATTCAATATTTAGAGC
60.366
47.826
30.85
0.00
0.00
4.09
3694
4331
3.253188
GGCGCCATTCAATATTTAGAGCA
59.747
43.478
24.80
0.00
0.00
4.26
3695
4332
4.082571
GGCGCCATTCAATATTTAGAGCAT
60.083
41.667
24.80
0.00
0.00
3.79
3696
4333
5.091431
GCGCCATTCAATATTTAGAGCATC
58.909
41.667
0.00
0.00
0.00
3.91
3707
4344
3.805267
GAGCATCTCCAACAGCCG
58.195
61.111
0.00
0.00
0.00
5.52
3708
4345
2.437359
AGCATCTCCAACAGCCGC
60.437
61.111
0.00
0.00
0.00
6.53
3709
4346
2.747460
GCATCTCCAACAGCCGCA
60.747
61.111
0.00
0.00
0.00
5.69
3710
4347
3.044059
GCATCTCCAACAGCCGCAC
62.044
63.158
0.00
0.00
0.00
5.34
3711
4348
1.376424
CATCTCCAACAGCCGCACT
60.376
57.895
0.00
0.00
0.00
4.40
3712
4349
0.108186
CATCTCCAACAGCCGCACTA
60.108
55.000
0.00
0.00
0.00
2.74
3713
4350
0.833287
ATCTCCAACAGCCGCACTAT
59.167
50.000
0.00
0.00
0.00
2.12
3714
4351
1.480789
TCTCCAACAGCCGCACTATA
58.519
50.000
0.00
0.00
0.00
1.31
3715
4352
2.039418
TCTCCAACAGCCGCACTATAT
58.961
47.619
0.00
0.00
0.00
0.86
3716
4353
3.227614
TCTCCAACAGCCGCACTATATA
58.772
45.455
0.00
0.00
0.00
0.86
3717
4354
3.639561
TCTCCAACAGCCGCACTATATAA
59.360
43.478
0.00
0.00
0.00
0.98
3718
4355
3.990092
TCCAACAGCCGCACTATATAAG
58.010
45.455
0.00
0.00
0.00
1.73
3719
4356
2.480419
CCAACAGCCGCACTATATAAGC
59.520
50.000
0.00
0.00
0.00
3.09
3724
4361
1.702299
CGCACTATATAAGCGCCGC
59.298
57.895
2.29
0.00
45.14
6.53
3725
4362
1.702299
GCACTATATAAGCGCCGCG
59.298
57.895
8.83
8.83
0.00
6.46
3739
4376
2.503809
CGCGCCGGAAATTTGTGG
60.504
61.111
5.05
0.00
0.00
4.17
3740
4377
2.648454
GCGCCGGAAATTTGTGGT
59.352
55.556
5.05
0.00
0.00
4.16
3741
4378
1.006688
GCGCCGGAAATTTGTGGTT
60.007
52.632
5.05
0.00
0.00
3.67
3742
4379
0.598942
GCGCCGGAAATTTGTGGTTT
60.599
50.000
5.05
0.00
0.00
3.27
3743
4380
1.859383
CGCCGGAAATTTGTGGTTTT
58.141
45.000
5.05
0.00
0.00
2.43
3744
4381
2.205911
CGCCGGAAATTTGTGGTTTTT
58.794
42.857
5.05
0.00
0.00
1.94
3745
4382
3.381949
CGCCGGAAATTTGTGGTTTTTA
58.618
40.909
5.05
0.00
0.00
1.52
3746
4383
3.427193
CGCCGGAAATTTGTGGTTTTTAG
59.573
43.478
5.05
0.00
0.00
1.85
3747
4384
3.185594
GCCGGAAATTTGTGGTTTTTAGC
59.814
43.478
5.05
0.00
0.00
3.09
3748
4385
4.372656
CCGGAAATTTGTGGTTTTTAGCA
58.627
39.130
0.00
0.00
0.00
3.49
3749
4386
4.210328
CCGGAAATTTGTGGTTTTTAGCAC
59.790
41.667
0.00
0.00
0.00
4.40
3750
4387
4.085312
CGGAAATTTGTGGTTTTTAGCACG
60.085
41.667
0.00
0.00
0.00
5.34
3751
4388
4.318475
GGAAATTTGTGGTTTTTAGCACGC
60.318
41.667
0.00
0.00
0.00
5.34
3752
4389
1.828832
TTTGTGGTTTTTAGCACGCG
58.171
45.000
3.53
3.53
0.00
6.01
3753
4390
0.592754
TTGTGGTTTTTAGCACGCGC
60.593
50.000
5.73
0.00
38.99
6.86
3754
4391
2.072654
GTGGTTTTTAGCACGCGCG
61.073
57.895
30.96
30.96
45.49
6.86
3755
4392
2.250190
GGTTTTTAGCACGCGCGT
59.750
55.556
32.73
32.73
45.49
6.01
3756
4393
1.220169
TGGTTTTTAGCACGCGCGTA
61.220
50.000
37.24
18.77
45.49
4.42
3757
4394
0.110733
GGTTTTTAGCACGCGCGTAA
60.111
50.000
37.24
24.01
45.49
3.18
3758
4395
1.464521
GGTTTTTAGCACGCGCGTAAT
60.465
47.619
37.24
27.76
45.49
1.89
3759
4396
1.830044
GTTTTTAGCACGCGCGTAATC
59.170
47.619
37.24
25.73
45.49
1.75
3760
4397
0.023985
TTTTAGCACGCGCGTAATCG
59.976
50.000
37.24
24.17
45.49
3.34
3779
4416
3.418675
CTAAGCGAGCTCCAACGAA
57.581
52.632
8.47
0.00
0.00
3.85
3780
4417
0.992802
CTAAGCGAGCTCCAACGAAC
59.007
55.000
8.47
0.00
0.00
3.95
3781
4418
0.315886
TAAGCGAGCTCCAACGAACA
59.684
50.000
8.47
0.00
0.00
3.18
3782
4419
1.222115
AAGCGAGCTCCAACGAACAC
61.222
55.000
8.47
0.00
0.00
3.32
3783
4420
3.000080
GCGAGCTCCAACGAACACG
62.000
63.158
8.47
0.00
0.00
4.49
3784
4421
2.853914
GAGCTCCAACGAACACGC
59.146
61.111
0.87
0.00
0.00
5.34
3785
4422
1.954146
GAGCTCCAACGAACACGCA
60.954
57.895
0.87
0.00
0.00
5.24
3786
4423
1.495584
GAGCTCCAACGAACACGCAA
61.496
55.000
0.87
0.00
0.00
4.85
3787
4424
1.092921
AGCTCCAACGAACACGCAAA
61.093
50.000
0.00
0.00
0.00
3.68
3788
4425
0.248296
GCTCCAACGAACACGCAAAA
60.248
50.000
0.00
0.00
0.00
2.44
3789
4426
1.795889
GCTCCAACGAACACGCAAAAA
60.796
47.619
0.00
0.00
0.00
1.94
3790
4427
1.843753
CTCCAACGAACACGCAAAAAC
59.156
47.619
0.00
0.00
0.00
2.43
3791
4428
0.917939
CCAACGAACACGCAAAAACC
59.082
50.000
0.00
0.00
0.00
3.27
3792
4429
0.917939
CAACGAACACGCAAAAACCC
59.082
50.000
0.00
0.00
0.00
4.11
3793
4430
0.179132
AACGAACACGCAAAAACCCC
60.179
50.000
0.00
0.00
0.00
4.95
3794
4431
1.655959
CGAACACGCAAAAACCCCG
60.656
57.895
0.00
0.00
0.00
5.73
3795
4432
1.947146
GAACACGCAAAAACCCCGC
60.947
57.895
0.00
0.00
0.00
6.13
3810
4447
3.536394
CGCGCGCGGCATATAGAG
61.536
66.667
43.28
13.53
43.84
2.43
3811
4448
2.430921
GCGCGCGGCATATAGAGT
60.431
61.111
33.06
0.00
42.87
3.24
3812
4449
2.022129
GCGCGCGGCATATAGAGTT
61.022
57.895
33.06
0.00
42.87
3.01
3813
4450
1.945776
GCGCGCGGCATATAGAGTTC
61.946
60.000
33.06
5.61
42.87
3.01
3814
4451
0.663269
CGCGCGGCATATAGAGTTCA
60.663
55.000
24.84
0.00
0.00
3.18
3815
4452
1.063806
GCGCGGCATATAGAGTTCAG
58.936
55.000
8.83
0.00
0.00
3.02
3816
4453
1.702886
CGCGGCATATAGAGTTCAGG
58.297
55.000
0.00
0.00
0.00
3.86
3817
4454
1.670087
CGCGGCATATAGAGTTCAGGG
60.670
57.143
0.00
0.00
0.00
4.45
3818
4455
1.941668
GCGGCATATAGAGTTCAGGGC
60.942
57.143
0.00
0.00
0.00
5.19
3819
4456
1.670087
CGGCATATAGAGTTCAGGGCG
60.670
57.143
0.00
0.00
36.55
6.13
3820
4457
1.344763
GGCATATAGAGTTCAGGGCGT
59.655
52.381
0.00
0.00
0.00
5.68
3821
4458
2.408050
GCATATAGAGTTCAGGGCGTG
58.592
52.381
0.00
0.00
0.00
5.34
3822
4459
2.868044
GCATATAGAGTTCAGGGCGTGG
60.868
54.545
7.42
0.00
0.00
4.94
3823
4460
2.154567
TATAGAGTTCAGGGCGTGGT
57.845
50.000
7.42
0.00
0.00
4.16
3824
4461
0.824759
ATAGAGTTCAGGGCGTGGTC
59.175
55.000
7.42
2.57
0.00
4.02
3825
4462
0.251653
TAGAGTTCAGGGCGTGGTCT
60.252
55.000
7.42
9.52
0.00
3.85
3826
4463
1.374758
GAGTTCAGGGCGTGGTCTG
60.375
63.158
7.42
0.00
0.00
3.51
3827
4464
1.816863
GAGTTCAGGGCGTGGTCTGA
61.817
60.000
7.42
0.00
38.14
3.27
3828
4465
1.070786
GTTCAGGGCGTGGTCTGAA
59.929
57.895
7.42
3.25
44.67
3.02
3829
4466
1.833606
TTCAGGGCGTGGTCTGAAA
59.166
52.632
7.42
0.00
44.14
2.69
3830
4467
0.534203
TTCAGGGCGTGGTCTGAAAC
60.534
55.000
7.42
0.00
44.14
2.78
3831
4468
2.030562
AGGGCGTGGTCTGAAACG
59.969
61.111
9.16
9.16
42.61
3.60
3835
4472
3.966215
CGTGGTCTGAAACGCCAT
58.034
55.556
1.82
0.00
34.52
4.40
3836
4473
1.787847
CGTGGTCTGAAACGCCATC
59.212
57.895
1.82
0.00
34.52
3.51
3837
4474
1.787847
GTGGTCTGAAACGCCATCG
59.212
57.895
0.00
0.00
42.43
3.84
3838
4475
2.032634
TGGTCTGAAACGCCATCGC
61.033
57.895
0.00
0.00
39.84
4.58
3848
4485
3.947841
GCCATCGCGCGCCATTTA
61.948
61.111
27.95
7.09
0.00
1.40
3849
4486
2.945984
CCATCGCGCGCCATTTAT
59.054
55.556
27.95
9.61
0.00
1.40
3850
4487
1.282570
CCATCGCGCGCCATTTATT
59.717
52.632
27.95
0.00
0.00
1.40
3851
4488
0.317770
CCATCGCGCGCCATTTATTT
60.318
50.000
27.95
0.00
0.00
1.40
3852
4489
0.771756
CATCGCGCGCCATTTATTTG
59.228
50.000
27.95
8.13
0.00
2.32
3853
4490
0.934436
ATCGCGCGCCATTTATTTGC
60.934
50.000
27.95
0.00
0.00
3.68
3854
4491
1.586042
CGCGCGCCATTTATTTGCT
60.586
52.632
27.72
0.00
0.00
3.91
3855
4492
1.800332
CGCGCGCCATTTATTTGCTG
61.800
55.000
27.72
1.87
0.00
4.41
3856
4493
1.919340
CGCGCCATTTATTTGCTGC
59.081
52.632
0.00
0.00
0.00
5.25
3857
4494
1.800332
CGCGCCATTTATTTGCTGCG
61.800
55.000
0.00
0.00
44.38
5.18
3858
4495
1.919340
CGCCATTTATTTGCTGCGC
59.081
52.632
0.00
0.00
35.33
6.09
3859
4496
1.481819
CGCCATTTATTTGCTGCGCC
61.482
55.000
4.18
0.00
35.33
6.53
3860
4497
0.179103
GCCATTTATTTGCTGCGCCT
60.179
50.000
4.18
0.00
0.00
5.52
3861
4498
1.563111
CCATTTATTTGCTGCGCCTG
58.437
50.000
4.18
0.00
0.00
4.85
3862
4499
0.925466
CATTTATTTGCTGCGCCTGC
59.075
50.000
14.38
14.38
43.20
4.85
3863
4500
0.819582
ATTTATTTGCTGCGCCTGCT
59.180
45.000
20.27
6.11
43.34
4.24
3864
4501
1.458398
TTTATTTGCTGCGCCTGCTA
58.542
45.000
20.27
12.17
43.34
3.49
3865
4502
0.732571
TTATTTGCTGCGCCTGCTAC
59.267
50.000
20.27
0.00
43.34
3.58
3866
4503
1.095228
TATTTGCTGCGCCTGCTACC
61.095
55.000
20.27
0.00
43.34
3.18
3888
4525
3.106407
GCCACACACTCGAGCGTC
61.106
66.667
13.61
0.00
0.00
5.19
3889
4526
2.430921
CCACACACTCGAGCGTCC
60.431
66.667
13.61
0.00
0.00
4.79
3890
4527
2.801162
CACACACTCGAGCGTCCG
60.801
66.667
13.61
0.44
0.00
4.79
3891
4528
4.702081
ACACACTCGAGCGTCCGC
62.702
66.667
13.61
2.94
42.33
5.54
3903
4540
4.415332
GTCCGCTCGCGACTTCCA
62.415
66.667
13.51
0.00
42.83
3.53
3904
4541
3.449227
TCCGCTCGCGACTTCCAT
61.449
61.111
13.51
0.00
42.83
3.41
3905
4542
2.956964
CCGCTCGCGACTTCCATC
60.957
66.667
13.51
0.00
42.83
3.51
3906
4543
2.103143
CGCTCGCGACTTCCATCT
59.897
61.111
3.71
0.00
42.83
2.90
3907
4544
1.355563
CGCTCGCGACTTCCATCTA
59.644
57.895
3.71
0.00
42.83
1.98
3908
4545
0.930742
CGCTCGCGACTTCCATCTAC
60.931
60.000
3.71
0.00
42.83
2.59
3909
4546
0.595310
GCTCGCGACTTCCATCTACC
60.595
60.000
3.71
0.00
0.00
3.18
3910
4547
0.030908
CTCGCGACTTCCATCTACCC
59.969
60.000
3.71
0.00
0.00
3.69
3911
4548
0.395311
TCGCGACTTCCATCTACCCT
60.395
55.000
3.71
0.00
0.00
4.34
3912
4549
0.249073
CGCGACTTCCATCTACCCTG
60.249
60.000
0.00
0.00
0.00
4.45
3913
4550
1.112113
GCGACTTCCATCTACCCTGA
58.888
55.000
0.00
0.00
0.00
3.86
3914
4551
1.202428
GCGACTTCCATCTACCCTGAC
60.202
57.143
0.00
0.00
0.00
3.51
3915
4552
1.409427
CGACTTCCATCTACCCTGACC
59.591
57.143
0.00
0.00
0.00
4.02
3916
4553
1.763545
GACTTCCATCTACCCTGACCC
59.236
57.143
0.00
0.00
0.00
4.46
3917
4554
1.080498
ACTTCCATCTACCCTGACCCA
59.920
52.381
0.00
0.00
0.00
4.51
3918
4555
1.765314
CTTCCATCTACCCTGACCCAG
59.235
57.143
0.00
0.00
0.00
4.45
3926
4563
2.125106
CCTGACCCAGGCGTTAGC
60.125
66.667
0.00
0.00
45.13
3.09
3927
4564
2.509336
CTGACCCAGGCGTTAGCG
60.509
66.667
0.00
0.00
46.35
4.26
3951
4588
3.381136
CCCGCACCACCCCATTTG
61.381
66.667
0.00
0.00
0.00
2.32
3952
4589
2.600173
CCGCACCACCCCATTTGT
60.600
61.111
0.00
0.00
0.00
2.83
3953
4590
2.206536
CCGCACCACCCCATTTGTT
61.207
57.895
0.00
0.00
0.00
2.83
3954
4591
1.288752
CGCACCACCCCATTTGTTC
59.711
57.895
0.00
0.00
0.00
3.18
3955
4592
1.671166
GCACCACCCCATTTGTTCC
59.329
57.895
0.00
0.00
0.00
3.62
3956
4593
1.963679
CACCACCCCATTTGTTCCG
59.036
57.895
0.00
0.00
0.00
4.30
3957
4594
0.538516
CACCACCCCATTTGTTCCGA
60.539
55.000
0.00
0.00
0.00
4.55
3958
4595
0.538746
ACCACCCCATTTGTTCCGAC
60.539
55.000
0.00
0.00
0.00
4.79
3959
4596
1.582610
CCACCCCATTTGTTCCGACG
61.583
60.000
0.00
0.00
0.00
5.12
3960
4597
0.604243
CACCCCATTTGTTCCGACGA
60.604
55.000
0.00
0.00
0.00
4.20
3961
4598
0.604511
ACCCCATTTGTTCCGACGAC
60.605
55.000
0.00
0.00
0.00
4.34
3962
4599
1.303091
CCCCATTTGTTCCGACGACC
61.303
60.000
0.00
0.00
0.00
4.79
3963
4600
0.604243
CCCATTTGTTCCGACGACCA
60.604
55.000
0.00
0.00
0.00
4.02
3964
4601
1.448985
CCATTTGTTCCGACGACCAT
58.551
50.000
0.00
0.00
0.00
3.55
3965
4602
1.810151
CCATTTGTTCCGACGACCATT
59.190
47.619
0.00
0.00
0.00
3.16
3966
4603
2.159572
CCATTTGTTCCGACGACCATTC
60.160
50.000
0.00
0.00
0.00
2.67
3967
4604
1.515081
TTTGTTCCGACGACCATTCC
58.485
50.000
0.00
0.00
0.00
3.01
3968
4605
0.668096
TTGTTCCGACGACCATTCCG
60.668
55.000
0.00
0.00
0.00
4.30
3969
4606
1.808390
GTTCCGACGACCATTCCGG
60.808
63.158
0.00
0.00
43.02
5.14
3970
4607
3.652539
TTCCGACGACCATTCCGGC
62.653
63.158
0.00
0.00
41.55
6.13
3973
4610
4.814294
GACGACCATTCCGGCGCT
62.814
66.667
7.64
0.00
39.03
5.92
3974
4611
4.388499
ACGACCATTCCGGCGCTT
62.388
61.111
7.64
0.00
39.03
4.68
3975
4612
3.124921
CGACCATTCCGGCGCTTT
61.125
61.111
7.64
0.00
39.03
3.51
3976
4613
2.791927
GACCATTCCGGCGCTTTC
59.208
61.111
7.64
0.00
39.03
2.62
3977
4614
2.750237
ACCATTCCGGCGCTTTCC
60.750
61.111
7.64
0.00
39.03
3.13
3978
4615
3.518068
CCATTCCGGCGCTTTCCC
61.518
66.667
7.64
0.00
0.00
3.97
3979
4616
3.876198
CATTCCGGCGCTTTCCCG
61.876
66.667
7.64
0.73
45.17
5.14
3985
4622
4.564110
GGCGCTTTCCCGGCCTAT
62.564
66.667
7.64
0.00
46.56
2.57
3986
4623
2.424302
GCGCTTTCCCGGCCTATA
59.576
61.111
0.00
0.00
0.00
1.31
3987
4624
1.959738
GCGCTTTCCCGGCCTATAC
60.960
63.158
0.00
0.00
0.00
1.47
3988
4625
1.301479
CGCTTTCCCGGCCTATACC
60.301
63.158
0.00
0.00
0.00
2.73
3989
4626
1.072678
GCTTTCCCGGCCTATACCC
59.927
63.158
0.00
0.00
0.00
3.69
3990
4627
1.702022
GCTTTCCCGGCCTATACCCA
61.702
60.000
0.00
0.00
0.00
4.51
3991
4628
0.108019
CTTTCCCGGCCTATACCCAC
59.892
60.000
0.00
0.00
0.00
4.61
3992
4629
1.688269
TTTCCCGGCCTATACCCACG
61.688
60.000
0.00
0.00
0.00
4.94
3993
4630
4.309950
CCCGGCCTATACCCACGC
62.310
72.222
0.00
0.00
0.00
5.34
3994
4631
3.542676
CCGGCCTATACCCACGCA
61.543
66.667
0.00
0.00
0.00
5.24
3995
4632
2.029073
CGGCCTATACCCACGCAG
59.971
66.667
0.00
0.00
0.00
5.18
3996
4633
2.280865
GGCCTATACCCACGCAGC
60.281
66.667
0.00
0.00
0.00
5.25
3997
4634
2.808206
GGCCTATACCCACGCAGCT
61.808
63.158
0.00
0.00
0.00
4.24
3998
4635
1.595382
GCCTATACCCACGCAGCTG
60.595
63.158
10.11
10.11
0.00
4.24
3999
4636
1.595382
CCTATACCCACGCAGCTGC
60.595
63.158
29.12
29.12
37.78
5.25
4000
4637
1.595382
CTATACCCACGCAGCTGCC
60.595
63.158
32.07
15.05
37.91
4.85
4001
4638
3.439513
TATACCCACGCAGCTGCCG
62.440
63.158
32.07
26.91
37.91
5.69
4010
4647
4.093291
CAGCTGCCGCTTCCTCCT
62.093
66.667
0.00
0.00
46.47
3.69
4011
4648
3.780173
AGCTGCCGCTTCCTCCTC
61.780
66.667
0.00
0.00
46.47
3.71
4012
4649
4.847444
GCTGCCGCTTCCTCCTCC
62.847
72.222
0.00
0.00
0.00
4.30
4013
4650
4.168291
CTGCCGCTTCCTCCTCCC
62.168
72.222
0.00
0.00
0.00
4.30
4014
4651
4.722535
TGCCGCTTCCTCCTCCCT
62.723
66.667
0.00
0.00
0.00
4.20
4015
4652
3.855853
GCCGCTTCCTCCTCCCTC
61.856
72.222
0.00
0.00
0.00
4.30
4016
4653
3.157949
CCGCTTCCTCCTCCCTCC
61.158
72.222
0.00
0.00
0.00
4.30
4017
4654
2.364317
CGCTTCCTCCTCCCTCCA
60.364
66.667
0.00
0.00
0.00
3.86
4018
4655
2.430610
CGCTTCCTCCTCCCTCCAG
61.431
68.421
0.00
0.00
0.00
3.86
4019
4656
1.306568
GCTTCCTCCTCCCTCCAGT
60.307
63.158
0.00
0.00
0.00
4.00
4020
4657
1.334384
GCTTCCTCCTCCCTCCAGTC
61.334
65.000
0.00
0.00
0.00
3.51
4021
4658
1.000486
TTCCTCCTCCCTCCAGTCG
60.000
63.158
0.00
0.00
0.00
4.18
4022
4659
3.151022
CCTCCTCCCTCCAGTCGC
61.151
72.222
0.00
0.00
0.00
5.19
4023
4660
3.151022
CTCCTCCCTCCAGTCGCC
61.151
72.222
0.00
0.00
0.00
5.54
4026
4663
3.827898
CTCCCTCCAGTCGCCGTC
61.828
72.222
0.00
0.00
0.00
4.79
4050
4687
4.520846
CGCGCGTGCCATTCCTTC
62.521
66.667
24.19
0.00
38.08
3.46
4051
4688
4.520846
GCGCGTGCCATTCCTTCG
62.521
66.667
10.56
0.00
33.98
3.79
4052
4689
2.813474
CGCGTGCCATTCCTTCGA
60.813
61.111
0.00
0.00
0.00
3.71
4053
4690
2.785258
GCGTGCCATTCCTTCGAC
59.215
61.111
0.00
0.00
0.00
4.20
4054
4691
3.081133
CGTGCCATTCCTTCGACG
58.919
61.111
0.00
0.00
0.00
5.12
4055
4692
1.445410
CGTGCCATTCCTTCGACGA
60.445
57.895
0.00
0.00
0.00
4.20
4056
4693
1.011968
CGTGCCATTCCTTCGACGAA
61.012
55.000
10.34
10.34
0.00
3.85
4057
4694
0.442699
GTGCCATTCCTTCGACGAAC
59.557
55.000
6.10
0.00
0.00
3.95
4058
4695
0.034198
TGCCATTCCTTCGACGAACA
59.966
50.000
6.10
0.00
0.00
3.18
4059
4696
1.153353
GCCATTCCTTCGACGAACAA
58.847
50.000
6.10
2.99
0.00
2.83
4060
4697
1.136057
GCCATTCCTTCGACGAACAAC
60.136
52.381
6.10
0.00
0.00
3.32
4062
4699
0.788391
ATTCCTTCGACGAACAACGC
59.212
50.000
6.10
0.00
46.94
4.84
4063
4700
1.216941
TTCCTTCGACGAACAACGCC
61.217
55.000
6.10
0.00
46.94
5.68
4064
4701
1.663702
CCTTCGACGAACAACGCCT
60.664
57.895
6.10
0.00
46.94
5.52
4065
4702
1.487231
CTTCGACGAACAACGCCTG
59.513
57.895
6.10
0.00
46.94
4.85
4066
4703
0.937699
CTTCGACGAACAACGCCTGA
60.938
55.000
6.10
0.00
46.94
3.86
4067
4704
1.210545
TTCGACGAACAACGCCTGAC
61.211
55.000
6.10
0.00
46.94
3.51
4068
4705
2.654912
CGACGAACAACGCCTGACC
61.655
63.158
0.00
0.00
46.94
4.02
4069
4706
2.654912
GACGAACAACGCCTGACCG
61.655
63.158
0.00
0.00
46.94
4.79
4070
4707
4.072088
CGAACAACGCCTGACCGC
62.072
66.667
0.00
0.00
34.51
5.68
4071
4708
2.665185
GAACAACGCCTGACCGCT
60.665
61.111
0.00
0.00
0.00
5.52
4072
4709
2.665185
AACAACGCCTGACCGCTC
60.665
61.111
0.00
0.00
0.00
5.03
4073
4710
3.454587
AACAACGCCTGACCGCTCA
62.455
57.895
0.00
0.00
0.00
4.26
4074
4711
3.414700
CAACGCCTGACCGCTCAC
61.415
66.667
0.00
0.00
0.00
3.51
4075
4712
3.616721
AACGCCTGACCGCTCACT
61.617
61.111
0.00
0.00
0.00
3.41
4076
4713
2.273179
AACGCCTGACCGCTCACTA
61.273
57.895
0.00
0.00
0.00
2.74
4077
4714
2.202623
CGCCTGACCGCTCACTAC
60.203
66.667
0.00
0.00
0.00
2.73
4078
4715
2.184579
GCCTGACCGCTCACTACC
59.815
66.667
0.00
0.00
0.00
3.18
4079
4716
2.490217
CCTGACCGCTCACTACCG
59.510
66.667
0.00
0.00
0.00
4.02
4080
4717
2.202623
CTGACCGCTCACTACCGC
60.203
66.667
0.00
0.00
0.00
5.68
4081
4718
2.675423
TGACCGCTCACTACCGCT
60.675
61.111
0.00
0.00
0.00
5.52
4082
4719
2.102553
GACCGCTCACTACCGCTC
59.897
66.667
0.00
0.00
0.00
5.03
4083
4720
3.736482
GACCGCTCACTACCGCTCG
62.736
68.421
0.00
0.00
0.00
5.03
4084
4721
4.554363
CCGCTCACTACCGCTCGG
62.554
72.222
6.79
6.79
42.03
4.63
4102
4739
2.280524
CGCCCACAAGGTGTTCGA
60.281
61.111
0.00
0.00
41.64
3.71
4103
4740
2.604174
CGCCCACAAGGTGTTCGAC
61.604
63.158
0.00
0.00
41.64
4.20
4104
4741
1.525077
GCCCACAAGGTGTTCGACA
60.525
57.895
0.00
0.00
38.26
4.35
4105
4742
1.098712
GCCCACAAGGTGTTCGACAA
61.099
55.000
0.00
0.00
38.26
3.18
4106
4743
1.384525
CCCACAAGGTGTTCGACAAA
58.615
50.000
0.00
0.00
0.00
2.83
4107
4744
1.746220
CCCACAAGGTGTTCGACAAAA
59.254
47.619
0.00
0.00
0.00
2.44
4108
4745
2.478879
CCCACAAGGTGTTCGACAAAAC
60.479
50.000
0.00
0.00
0.00
2.43
4109
4746
2.436670
CACAAGGTGTTCGACAAAACG
58.563
47.619
0.00
0.00
31.58
3.60
4110
4747
1.202098
ACAAGGTGTTCGACAAAACGC
60.202
47.619
0.00
0.00
38.60
4.84
4111
4748
1.063469
CAAGGTGTTCGACAAAACGCT
59.937
47.619
0.00
0.00
39.16
5.07
4112
4749
1.375551
AGGTGTTCGACAAAACGCTT
58.624
45.000
0.00
0.00
39.16
4.68
4113
4750
1.063469
AGGTGTTCGACAAAACGCTTG
59.937
47.619
0.00
0.00
39.16
4.01
4114
4751
0.837605
GTGTTCGACAAAACGCTTGC
59.162
50.000
0.00
0.00
36.84
4.01
4115
4752
0.448197
TGTTCGACAAAACGCTTGCA
59.552
45.000
0.00
0.00
31.58
4.08
4116
4753
1.135660
TGTTCGACAAAACGCTTGCAA
60.136
42.857
0.00
0.00
31.58
4.08
4117
4754
1.512771
GTTCGACAAAACGCTTGCAAG
59.487
47.619
22.44
22.44
0.00
4.01
4118
4755
0.028770
TCGACAAAACGCTTGCAAGG
59.971
50.000
27.10
18.79
0.00
3.61
4119
4756
0.248458
CGACAAAACGCTTGCAAGGT
60.248
50.000
27.10
19.42
0.00
3.50
4120
4757
1.003331
CGACAAAACGCTTGCAAGGTA
60.003
47.619
27.10
0.00
0.00
3.08
4121
4758
2.350388
CGACAAAACGCTTGCAAGGTAT
60.350
45.455
27.10
12.77
0.00
2.73
4122
4759
2.979813
GACAAAACGCTTGCAAGGTATG
59.020
45.455
27.10
22.62
0.00
2.39
4123
4760
2.360801
ACAAAACGCTTGCAAGGTATGT
59.639
40.909
27.10
23.12
0.00
2.29
4124
4761
3.566322
ACAAAACGCTTGCAAGGTATGTA
59.434
39.130
27.10
0.00
0.00
2.29
4125
4762
4.217550
ACAAAACGCTTGCAAGGTATGTAT
59.782
37.500
27.10
6.07
0.00
2.29
4126
4763
5.160641
CAAAACGCTTGCAAGGTATGTATT
58.839
37.500
27.10
11.16
0.00
1.89
4127
4764
4.355543
AACGCTTGCAAGGTATGTATTG
57.644
40.909
27.10
0.00
0.00
1.90
4135
4772
5.567138
GCAAGGTATGTATTGCTTCAACT
57.433
39.130
2.80
0.00
46.49
3.16
4136
4773
5.954335
GCAAGGTATGTATTGCTTCAACTT
58.046
37.500
2.80
0.00
46.49
2.66
4137
4774
5.801947
GCAAGGTATGTATTGCTTCAACTTG
59.198
40.000
2.80
0.00
46.49
3.16
4138
4775
6.349280
GCAAGGTATGTATTGCTTCAACTTGA
60.349
38.462
0.00
0.00
46.49
3.02
4139
4776
6.743575
AGGTATGTATTGCTTCAACTTGAC
57.256
37.500
0.00
0.00
0.00
3.18
4140
4777
6.237901
AGGTATGTATTGCTTCAACTTGACA
58.762
36.000
0.00
0.00
0.00
3.58
4141
4778
6.886459
AGGTATGTATTGCTTCAACTTGACAT
59.114
34.615
0.00
0.00
0.00
3.06
4142
4779
7.394359
AGGTATGTATTGCTTCAACTTGACATT
59.606
33.333
0.00
0.00
0.00
2.71
4143
4780
8.028938
GGTATGTATTGCTTCAACTTGACATTT
58.971
33.333
0.00
0.00
0.00
2.32
4144
4781
9.410556
GTATGTATTGCTTCAACTTGACATTTT
57.589
29.630
0.00
0.00
0.00
1.82
4145
4782
8.891671
ATGTATTGCTTCAACTTGACATTTTT
57.108
26.923
0.00
0.00
0.00
1.94
4170
4807
5.676532
CATGAATTTGGTGCATGTTGTTT
57.323
34.783
0.00
0.00
35.78
2.83
4171
4808
5.444983
CATGAATTTGGTGCATGTTGTTTG
58.555
37.500
0.00
0.00
35.78
2.93
4172
4809
4.511527
TGAATTTGGTGCATGTTGTTTGT
58.488
34.783
0.00
0.00
0.00
2.83
4173
4810
5.664457
TGAATTTGGTGCATGTTGTTTGTA
58.336
33.333
0.00
0.00
0.00
2.41
4174
4811
5.752472
TGAATTTGGTGCATGTTGTTTGTAG
59.248
36.000
0.00
0.00
0.00
2.74
4175
4812
4.727507
TTTGGTGCATGTTGTTTGTAGT
57.272
36.364
0.00
0.00
0.00
2.73
4176
4813
4.727507
TTGGTGCATGTTGTTTGTAGTT
57.272
36.364
0.00
0.00
0.00
2.24
4177
4814
4.727507
TGGTGCATGTTGTTTGTAGTTT
57.272
36.364
0.00
0.00
0.00
2.66
4178
4815
5.078411
TGGTGCATGTTGTTTGTAGTTTT
57.922
34.783
0.00
0.00
0.00
2.43
4179
4816
5.482908
TGGTGCATGTTGTTTGTAGTTTTT
58.517
33.333
0.00
0.00
0.00
1.94
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
7
8
1.832719
TAGCTGGCTACCAAACCGCA
61.833
55.000
0.00
0.00
30.80
5.69
71
72
7.629157
TGATCAAACACATGAATTCTACCCTA
58.371
34.615
7.05
0.00
32.06
3.53
100
101
1.451028
GGTGCAGGAGCCACTGATC
60.451
63.158
9.25
0.00
40.97
2.92
141
142
1.585297
AAACGTACCAACAGGGAACG
58.415
50.000
9.24
9.24
41.15
3.95
219
222
5.803020
AATGATCGACTTTTCTTGCCTAC
57.197
39.130
0.00
0.00
0.00
3.18
257
260
3.260475
TCACCCTGGACGAATGTAATG
57.740
47.619
0.00
0.00
0.00
1.90
261
264
3.992943
TTTATCACCCTGGACGAATGT
57.007
42.857
0.00
0.00
0.00
2.71
262
265
5.835113
AAATTTATCACCCTGGACGAATG
57.165
39.130
0.00
0.00
0.00
2.67
263
266
6.659824
ACTAAATTTATCACCCTGGACGAAT
58.340
36.000
0.00
0.00
0.00
3.34
265
268
5.687166
ACTAAATTTATCACCCTGGACGA
57.313
39.130
0.00
0.00
0.00
4.20
266
269
5.878116
TCAACTAAATTTATCACCCTGGACG
59.122
40.000
0.00
0.00
0.00
4.79
268
271
5.878116
CGTCAACTAAATTTATCACCCTGGA
59.122
40.000
0.00
0.00
0.00
3.86
269
272
5.878116
TCGTCAACTAAATTTATCACCCTGG
59.122
40.000
0.00
0.00
0.00
4.45
270
273
6.594159
ACTCGTCAACTAAATTTATCACCCTG
59.406
38.462
0.00
0.00
0.00
4.45
271
274
6.708285
ACTCGTCAACTAAATTTATCACCCT
58.292
36.000
0.00
0.00
0.00
4.34
272
275
6.980051
ACTCGTCAACTAAATTTATCACCC
57.020
37.500
0.00
0.00
0.00
4.61
273
276
8.548721
CCATACTCGTCAACTAAATTTATCACC
58.451
37.037
0.00
0.00
0.00
4.02
274
277
8.062448
GCCATACTCGTCAACTAAATTTATCAC
58.938
37.037
0.00
0.00
0.00
3.06
278
281
7.908827
TTGCCATACTCGTCAACTAAATTTA
57.091
32.000
0.00
0.00
0.00
1.40
290
293
1.480954
AGACGGATTTGCCATACTCGT
59.519
47.619
0.00
0.00
35.94
4.18
291
294
2.128035
GAGACGGATTTGCCATACTCG
58.872
52.381
0.00
0.00
35.94
4.18
434
460
1.132527
TCTTCCCCTTTGTCCTCTCCA
60.133
52.381
0.00
0.00
0.00
3.86
632
658
3.053291
TTGCGTCGTGGGCAATCC
61.053
61.111
6.47
0.00
44.79
3.01
666
701
5.629435
CGATTGGCTGATTGATTGATTGATG
59.371
40.000
0.00
0.00
0.00
3.07
667
702
5.769367
CGATTGGCTGATTGATTGATTGAT
58.231
37.500
0.00
0.00
0.00
2.57
668
703
4.498513
GCGATTGGCTGATTGATTGATTGA
60.499
41.667
0.00
0.00
39.11
2.57
669
704
3.734231
GCGATTGGCTGATTGATTGATTG
59.266
43.478
0.00
0.00
39.11
2.67
762
798
3.303928
GGGGGCGTATCGGAGGAG
61.304
72.222
0.00
0.00
0.00
3.69
766
802
2.203451
GAGAGGGGGCGTATCGGA
60.203
66.667
0.00
0.00
0.00
4.55
791
849
1.683319
GGGAAGGGCAGAGGATTTGTC
60.683
57.143
0.00
0.00
0.00
3.18
794
852
0.553612
AGGGGAAGGGCAGAGGATTT
60.554
55.000
0.00
0.00
0.00
2.17
937
1415
4.145052
ACCAAACACCAAAGATTCTCCTC
58.855
43.478
0.00
0.00
0.00
3.71
997
1475
2.287668
GGAGCAGCGTATTACTCATCGT
60.288
50.000
0.00
0.00
0.00
3.73
1287
1765
5.541845
CATAGGAAATCCGTCAGCAAGATA
58.458
41.667
0.00
0.00
42.08
1.98
1339
1817
2.879646
CACTGCGTACTTTTTGGGGTTA
59.120
45.455
0.00
0.00
0.00
2.85
1488
2029
2.418197
GGTGCCTGCATCGTAACTAGAA
60.418
50.000
0.00
0.00
0.00
2.10
1633
2174
2.252072
ATCAACATCCACGGGGTCGG
62.252
60.000
2.12
0.00
41.39
4.79
1638
2179
2.754552
ACAATCAATCAACATCCACGGG
59.245
45.455
0.00
0.00
0.00
5.28
1665
2206
3.809279
CACTCACATTACAGCTCACACAA
59.191
43.478
0.00
0.00
0.00
3.33
1671
2212
5.178797
ACCATAACACTCACATTACAGCTC
58.821
41.667
0.00
0.00
0.00
4.09
1673
2214
5.880054
AACCATAACACTCACATTACAGC
57.120
39.130
0.00
0.00
0.00
4.40
1691
2232
1.876416
GCTCTGCCGAACTACAAACCA
60.876
52.381
0.00
0.00
0.00
3.67
2132
2673
6.441093
TCCAAGCAGAATAATAGTGCAAAG
57.559
37.500
0.00
0.00
39.80
2.77
2224
2767
5.376625
AGAGCTAAATATCGCCATTCCAAA
58.623
37.500
0.00
0.00
0.00
3.28
2305
2854
9.760660
CTCTTCAAACAATAAAAATCCTAGTCG
57.239
33.333
0.00
0.00
0.00
4.18
2779
3408
4.550577
TGTCTGCAATATAATTGTGCGG
57.449
40.909
0.00
0.00
44.42
5.69
2820
3449
5.394333
GGAGTTACCAGACTGATCAGGTTAC
60.394
48.000
26.08
17.75
41.81
2.50
2829
3458
1.267121
GGCAGGAGTTACCAGACTGA
58.733
55.000
3.32
0.00
42.04
3.41
2869
3498
7.870954
TCTTTTCGTGTTGTGTTATGATAGTCT
59.129
33.333
0.00
0.00
0.00
3.24
2972
3601
5.794894
TGGTTTGGAAAAGCAAACAAGTTA
58.205
33.333
1.73
0.00
41.55
2.24
2990
3619
4.523083
TGTCTAGCAACAGAGTTTGGTTT
58.477
39.130
0.00
0.00
38.20
3.27
3190
3819
6.148645
CGCAAAACCATATGTATATGTAGCCA
59.851
38.462
10.14
0.00
38.73
4.75
3222
3851
1.340600
GGTAACCAGGCAAGGCATACA
60.341
52.381
11.74
0.00
0.00
2.29
3463
4093
6.325028
TGGTGGAATCAATTGACAAAAGGTTA
59.675
34.615
11.07
0.00
0.00
2.85
3474
4104
2.094390
CAGCAGGTGGTGGAATCAATTG
60.094
50.000
0.00
0.00
39.67
2.32
3477
4107
0.895100
GCAGCAGGTGGTGGAATCAA
60.895
55.000
10.97
0.00
43.24
2.57
3478
4108
1.303561
GCAGCAGGTGGTGGAATCA
60.304
57.895
10.97
0.00
43.24
2.57
3507
4137
4.553330
TCCTTACAAGCAGGAGGTTAAG
57.447
45.455
0.00
0.00
35.34
1.85
3525
4155
3.553828
TCACCGTCAGTTTTCTTTCCT
57.446
42.857
0.00
0.00
0.00
3.36
3527
4157
7.829378
ACTATATCACCGTCAGTTTTCTTTC
57.171
36.000
0.00
0.00
0.00
2.62
3541
4171
5.269991
TCCACTAGGGCATACTATATCACC
58.730
45.833
0.00
0.00
36.21
4.02
3556
4186
3.049080
GCCCAGGCCTTCCACTAGG
62.049
68.421
0.00
0.00
38.40
3.02
3578
4208
2.158813
ACGGGCTTCCTTACATACATGG
60.159
50.000
0.00
0.00
0.00
3.66
3579
4209
3.194005
ACGGGCTTCCTTACATACATG
57.806
47.619
0.00
0.00
0.00
3.21
3580
4210
4.407945
AGTTACGGGCTTCCTTACATACAT
59.592
41.667
0.00
0.00
0.00
2.29
3581
4211
3.770933
AGTTACGGGCTTCCTTACATACA
59.229
43.478
0.00
0.00
0.00
2.29
3582
4212
4.117685
CAGTTACGGGCTTCCTTACATAC
58.882
47.826
0.00
0.00
0.00
2.39
3583
4213
3.431207
GCAGTTACGGGCTTCCTTACATA
60.431
47.826
0.00
0.00
0.00
2.29
3674
4308
6.402983
GGAGATGCTCTAAATATTGAATGGCG
60.403
42.308
0.00
0.00
0.00
5.69
3690
4327
2.467826
GCGGCTGTTGGAGATGCTC
61.468
63.158
0.00
0.00
0.00
4.26
3691
4328
2.437359
GCGGCTGTTGGAGATGCT
60.437
61.111
0.00
0.00
0.00
3.79
3692
4329
2.747460
TGCGGCTGTTGGAGATGC
60.747
61.111
0.00
0.00
0.00
3.91
3693
4330
0.108186
TAGTGCGGCTGTTGGAGATG
60.108
55.000
0.00
0.00
0.00
2.90
3694
4331
0.833287
ATAGTGCGGCTGTTGGAGAT
59.167
50.000
0.00
0.00
0.00
2.75
3695
4332
1.480789
TATAGTGCGGCTGTTGGAGA
58.519
50.000
0.00
0.00
0.00
3.71
3696
4333
2.533266
ATATAGTGCGGCTGTTGGAG
57.467
50.000
0.00
0.00
0.00
3.86
3697
4334
3.802329
GCTTATATAGTGCGGCTGTTGGA
60.802
47.826
0.00
0.00
0.00
3.53
3698
4335
2.480419
GCTTATATAGTGCGGCTGTTGG
59.520
50.000
0.00
0.00
0.00
3.77
3699
4336
2.155732
CGCTTATATAGTGCGGCTGTTG
59.844
50.000
18.44
0.00
45.07
3.33
3700
4337
2.404215
CGCTTATATAGTGCGGCTGTT
58.596
47.619
18.44
0.00
45.07
3.16
3701
4338
2.065993
CGCTTATATAGTGCGGCTGT
57.934
50.000
18.44
0.00
45.07
4.40
3722
4359
2.503809
CCACAAATTTCCGGCGCG
60.504
61.111
0.00
0.00
0.00
6.86
3723
4360
0.598942
AAACCACAAATTTCCGGCGC
60.599
50.000
0.00
0.00
0.00
6.53
3724
4361
1.859383
AAAACCACAAATTTCCGGCG
58.141
45.000
0.00
0.00
0.00
6.46
3725
4362
3.185594
GCTAAAAACCACAAATTTCCGGC
59.814
43.478
0.00
0.00
0.00
6.13
3726
4363
4.210328
GTGCTAAAAACCACAAATTTCCGG
59.790
41.667
0.00
0.00
32.37
5.14
3727
4364
4.085312
CGTGCTAAAAACCACAAATTTCCG
60.085
41.667
0.00
0.00
32.37
4.30
3728
4365
4.318475
GCGTGCTAAAAACCACAAATTTCC
60.318
41.667
0.00
0.00
32.37
3.13
3729
4366
4.605135
CGCGTGCTAAAAACCACAAATTTC
60.605
41.667
0.00
0.00
32.37
2.17
3730
4367
3.244111
CGCGTGCTAAAAACCACAAATTT
59.756
39.130
0.00
0.00
32.37
1.82
3731
4368
2.792116
CGCGTGCTAAAAACCACAAATT
59.208
40.909
0.00
0.00
32.37
1.82
3732
4369
2.389998
CGCGTGCTAAAAACCACAAAT
58.610
42.857
0.00
0.00
32.37
2.32
3733
4370
1.828832
CGCGTGCTAAAAACCACAAA
58.171
45.000
0.00
0.00
32.37
2.83
3734
4371
0.592754
GCGCGTGCTAAAAACCACAA
60.593
50.000
15.02
0.00
38.39
3.33
3735
4372
1.009449
GCGCGTGCTAAAAACCACA
60.009
52.632
15.02
0.00
38.39
4.17
3736
4373
2.072654
CGCGCGTGCTAAAAACCAC
61.073
57.895
24.19
0.00
39.65
4.16
3737
4374
1.220169
TACGCGCGTGCTAAAAACCA
61.220
50.000
42.78
18.35
39.65
3.67
3738
4375
0.110733
TTACGCGCGTGCTAAAAACC
60.111
50.000
42.78
0.00
39.65
3.27
3739
4376
1.830044
GATTACGCGCGTGCTAAAAAC
59.170
47.619
42.78
23.98
39.65
2.43
3740
4377
1.525384
CGATTACGCGCGTGCTAAAAA
60.525
47.619
42.78
28.62
39.65
1.94
3741
4378
0.023985
CGATTACGCGCGTGCTAAAA
59.976
50.000
42.78
29.36
39.65
1.52
3742
4379
1.626905
CGATTACGCGCGTGCTAAA
59.373
52.632
42.78
29.75
39.65
1.85
3743
4380
3.291610
CGATTACGCGCGTGCTAA
58.708
55.556
42.78
30.12
39.65
3.09
3761
4398
0.992802
GTTCGTTGGAGCTCGCTTAG
59.007
55.000
7.83
0.00
0.00
2.18
3762
4399
0.315886
TGTTCGTTGGAGCTCGCTTA
59.684
50.000
7.83
0.00
0.00
3.09
3763
4400
1.069090
TGTTCGTTGGAGCTCGCTT
59.931
52.632
7.83
0.00
0.00
4.68
3764
4401
1.664965
GTGTTCGTTGGAGCTCGCT
60.665
57.895
7.83
0.00
0.00
4.93
3765
4402
2.853914
GTGTTCGTTGGAGCTCGC
59.146
61.111
7.83
1.18
0.00
5.03
3766
4403
3.000080
GCGTGTTCGTTGGAGCTCG
62.000
63.158
7.83
0.00
41.36
5.03
3767
4404
1.495584
TTGCGTGTTCGTTGGAGCTC
61.496
55.000
4.71
4.71
39.49
4.09
3768
4405
1.092921
TTTGCGTGTTCGTTGGAGCT
61.093
50.000
0.00
0.00
39.49
4.09
3769
4406
0.248296
TTTTGCGTGTTCGTTGGAGC
60.248
50.000
0.00
0.00
39.49
4.70
3770
4407
1.843753
GTTTTTGCGTGTTCGTTGGAG
59.156
47.619
0.00
0.00
39.49
3.86
3771
4408
1.467713
GGTTTTTGCGTGTTCGTTGGA
60.468
47.619
0.00
0.00
39.49
3.53
3772
4409
0.917939
GGTTTTTGCGTGTTCGTTGG
59.082
50.000
0.00
0.00
39.49
3.77
3773
4410
0.917939
GGGTTTTTGCGTGTTCGTTG
59.082
50.000
0.00
0.00
39.49
4.10
3774
4411
0.179132
GGGGTTTTTGCGTGTTCGTT
60.179
50.000
0.00
0.00
39.49
3.85
3775
4412
1.434287
GGGGTTTTTGCGTGTTCGT
59.566
52.632
0.00
0.00
39.49
3.85
3776
4413
1.655959
CGGGGTTTTTGCGTGTTCG
60.656
57.895
0.00
0.00
40.37
3.95
3777
4414
1.947146
GCGGGGTTTTTGCGTGTTC
60.947
57.895
0.00
0.00
0.00
3.18
3778
4415
2.105328
GCGGGGTTTTTGCGTGTT
59.895
55.556
0.00
0.00
0.00
3.32
3779
4416
4.258932
CGCGGGGTTTTTGCGTGT
62.259
61.111
0.00
0.00
46.29
4.49
3793
4430
3.536394
CTCTATATGCCGCGCGCG
61.536
66.667
43.73
43.73
42.08
6.86
3794
4431
1.945776
GAACTCTATATGCCGCGCGC
61.946
60.000
27.36
23.91
38.31
6.86
3795
4432
0.663269
TGAACTCTATATGCCGCGCG
60.663
55.000
25.67
25.67
0.00
6.86
3796
4433
1.063806
CTGAACTCTATATGCCGCGC
58.936
55.000
0.00
0.00
0.00
6.86
3797
4434
1.670087
CCCTGAACTCTATATGCCGCG
60.670
57.143
0.00
0.00
0.00
6.46
3798
4435
1.941668
GCCCTGAACTCTATATGCCGC
60.942
57.143
0.00
0.00
0.00
6.53
3799
4436
1.670087
CGCCCTGAACTCTATATGCCG
60.670
57.143
0.00
0.00
0.00
5.69
3800
4437
1.344763
ACGCCCTGAACTCTATATGCC
59.655
52.381
0.00
0.00
0.00
4.40
3801
4438
2.408050
CACGCCCTGAACTCTATATGC
58.592
52.381
0.00
0.00
0.00
3.14
3802
4439
2.365617
ACCACGCCCTGAACTCTATATG
59.634
50.000
0.00
0.00
0.00
1.78
3803
4440
2.628657
GACCACGCCCTGAACTCTATAT
59.371
50.000
0.00
0.00
0.00
0.86
3804
4441
2.029623
GACCACGCCCTGAACTCTATA
58.970
52.381
0.00
0.00
0.00
1.31
3805
4442
0.824759
GACCACGCCCTGAACTCTAT
59.175
55.000
0.00
0.00
0.00
1.98
3806
4443
0.251653
AGACCACGCCCTGAACTCTA
60.252
55.000
0.00
0.00
0.00
2.43
3807
4444
1.534235
AGACCACGCCCTGAACTCT
60.534
57.895
0.00
0.00
0.00
3.24
3808
4445
1.374758
CAGACCACGCCCTGAACTC
60.375
63.158
0.00
0.00
32.37
3.01
3809
4446
1.407656
TTCAGACCACGCCCTGAACT
61.408
55.000
0.00
0.00
42.48
3.01
3810
4447
0.534203
TTTCAGACCACGCCCTGAAC
60.534
55.000
0.00
0.00
45.69
3.18
3811
4448
0.534203
GTTTCAGACCACGCCCTGAA
60.534
55.000
0.00
0.00
44.75
3.02
3812
4449
1.070786
GTTTCAGACCACGCCCTGA
59.929
57.895
0.00
0.00
37.61
3.86
3813
4450
2.317609
CGTTTCAGACCACGCCCTG
61.318
63.158
0.00
0.00
0.00
4.45
3814
4451
2.030562
CGTTTCAGACCACGCCCT
59.969
61.111
0.00
0.00
0.00
5.19
3818
4455
1.787847
GATGGCGTTTCAGACCACG
59.212
57.895
0.00
0.00
35.99
4.94
3819
4456
1.787847
CGATGGCGTTTCAGACCAC
59.212
57.895
0.00
0.00
35.99
4.16
3820
4457
2.032634
GCGATGGCGTTTCAGACCA
61.033
57.895
0.00
0.00
40.36
4.02
3821
4458
2.785258
GCGATGGCGTTTCAGACC
59.215
61.111
0.00
0.00
40.36
3.85
3831
4468
2.731587
AATAAATGGCGCGCGATGGC
62.732
55.000
37.18
17.84
0.00
4.40
3832
4469
0.317770
AAATAAATGGCGCGCGATGG
60.318
50.000
37.18
4.39
0.00
3.51
3833
4470
0.771756
CAAATAAATGGCGCGCGATG
59.228
50.000
37.18
13.46
0.00
3.84
3834
4471
0.934436
GCAAATAAATGGCGCGCGAT
60.934
50.000
37.18
25.10
0.00
4.58
3835
4472
1.585002
GCAAATAAATGGCGCGCGA
60.585
52.632
37.18
23.73
0.00
5.87
3836
4473
1.586042
AGCAAATAAATGGCGCGCG
60.586
52.632
28.44
28.44
0.00
6.86
3837
4474
1.919340
CAGCAAATAAATGGCGCGC
59.081
52.632
25.94
25.94
0.00
6.86
3838
4475
1.800332
CGCAGCAAATAAATGGCGCG
61.800
55.000
0.00
0.00
41.22
6.86
3839
4476
1.919340
CGCAGCAAATAAATGGCGC
59.081
52.632
0.00
0.00
37.96
6.53
3871
4508
3.106407
GACGCTCGAGTGTGTGGC
61.106
66.667
34.60
17.15
39.12
5.01
3872
4509
2.430921
GGACGCTCGAGTGTGTGG
60.431
66.667
34.60
9.84
39.12
4.17
3873
4510
2.801162
CGGACGCTCGAGTGTGTG
60.801
66.667
34.60
21.95
39.12
3.82
3874
4511
4.702081
GCGGACGCTCGAGTGTGT
62.702
66.667
34.60
20.11
39.12
3.72
3886
4523
3.701604
ATGGAAGTCGCGAGCGGAC
62.702
63.158
10.24
13.46
40.25
4.79
3887
4524
3.411418
GATGGAAGTCGCGAGCGGA
62.411
63.158
10.24
1.70
40.25
5.54
3888
4525
2.060004
TAGATGGAAGTCGCGAGCGG
62.060
60.000
10.24
0.00
40.25
5.52
3889
4526
0.930742
GTAGATGGAAGTCGCGAGCG
60.931
60.000
10.24
11.64
41.35
5.03
3890
4527
0.595310
GGTAGATGGAAGTCGCGAGC
60.595
60.000
10.24
4.59
0.00
5.03
3891
4528
0.030908
GGGTAGATGGAAGTCGCGAG
59.969
60.000
10.24
0.00
0.00
5.03
3892
4529
0.395311
AGGGTAGATGGAAGTCGCGA
60.395
55.000
3.71
3.71
0.00
5.87
3893
4530
0.249073
CAGGGTAGATGGAAGTCGCG
60.249
60.000
0.00
0.00
0.00
5.87
3894
4531
1.112113
TCAGGGTAGATGGAAGTCGC
58.888
55.000
0.00
0.00
0.00
5.19
3895
4532
1.409427
GGTCAGGGTAGATGGAAGTCG
59.591
57.143
0.00
0.00
0.00
4.18
3896
4533
1.763545
GGGTCAGGGTAGATGGAAGTC
59.236
57.143
0.00
0.00
0.00
3.01
3897
4534
1.080498
TGGGTCAGGGTAGATGGAAGT
59.920
52.381
0.00
0.00
0.00
3.01
3898
4535
1.765314
CTGGGTCAGGGTAGATGGAAG
59.235
57.143
0.00
0.00
0.00
3.46
3899
4536
1.879575
CTGGGTCAGGGTAGATGGAA
58.120
55.000
0.00
0.00
0.00
3.53
3900
4537
3.635099
CTGGGTCAGGGTAGATGGA
57.365
57.895
0.00
0.00
0.00
3.41
3910
4547
2.509336
CGCTAACGCCTGGGTCAG
60.509
66.667
0.00
0.00
0.00
3.51
3934
4571
3.381136
CAAATGGGGTGGTGCGGG
61.381
66.667
0.00
0.00
0.00
6.13
3935
4572
2.153547
GAACAAATGGGGTGGTGCGG
62.154
60.000
0.00
0.00
0.00
5.69
3936
4573
1.288752
GAACAAATGGGGTGGTGCG
59.711
57.895
0.00
0.00
0.00
5.34
3937
4574
1.671166
GGAACAAATGGGGTGGTGC
59.329
57.895
0.00
0.00
0.00
5.01
3938
4575
0.538516
TCGGAACAAATGGGGTGGTG
60.539
55.000
0.00
0.00
0.00
4.17
3939
4576
0.538746
GTCGGAACAAATGGGGTGGT
60.539
55.000
0.00
0.00
0.00
4.16
3940
4577
1.582610
CGTCGGAACAAATGGGGTGG
61.583
60.000
0.00
0.00
0.00
4.61
3941
4578
0.604243
TCGTCGGAACAAATGGGGTG
60.604
55.000
0.00
0.00
0.00
4.61
3942
4579
0.604511
GTCGTCGGAACAAATGGGGT
60.605
55.000
0.00
0.00
0.00
4.95
3943
4580
1.303091
GGTCGTCGGAACAAATGGGG
61.303
60.000
0.00
0.00
0.00
4.96
3944
4581
0.604243
TGGTCGTCGGAACAAATGGG
60.604
55.000
0.00
0.00
36.80
4.00
3945
4582
1.448985
ATGGTCGTCGGAACAAATGG
58.551
50.000
0.00
0.00
44.54
3.16
3946
4583
2.159572
GGAATGGTCGTCGGAACAAATG
60.160
50.000
0.00
0.00
44.54
2.32
3947
4584
2.081462
GGAATGGTCGTCGGAACAAAT
58.919
47.619
0.00
0.00
44.54
2.32
3948
4585
1.515081
GGAATGGTCGTCGGAACAAA
58.485
50.000
0.00
0.00
44.54
2.83
3949
4586
0.668096
CGGAATGGTCGTCGGAACAA
60.668
55.000
0.00
0.00
44.54
2.83
3950
4587
1.080366
CGGAATGGTCGTCGGAACA
60.080
57.895
0.00
0.00
45.66
3.18
3951
4588
1.808390
CCGGAATGGTCGTCGGAAC
60.808
63.158
0.00
0.00
44.69
3.62
3952
4589
2.574929
CCGGAATGGTCGTCGGAA
59.425
61.111
0.00
0.00
44.69
4.30
3953
4590
4.137872
GCCGGAATGGTCGTCGGA
62.138
66.667
5.05
0.00
44.69
4.55
3956
4593
4.814294
AGCGCCGGAATGGTCGTC
62.814
66.667
5.05
0.00
41.21
4.20
3957
4594
3.894547
AAAGCGCCGGAATGGTCGT
62.895
57.895
5.05
0.00
41.21
4.34
3958
4595
3.095898
GAAAGCGCCGGAATGGTCG
62.096
63.158
5.05
0.00
41.21
4.79
3959
4596
2.761195
GGAAAGCGCCGGAATGGTC
61.761
63.158
5.05
0.00
41.21
4.02
3960
4597
2.750237
GGAAAGCGCCGGAATGGT
60.750
61.111
5.05
0.00
41.21
3.55
3961
4598
3.518068
GGGAAAGCGCCGGAATGG
61.518
66.667
5.05
0.00
42.50
3.16
3962
4599
3.876198
CGGGAAAGCGCCGGAATG
61.876
66.667
5.05
0.00
0.00
2.67
3968
4605
3.173167
TATAGGCCGGGAAAGCGCC
62.173
63.158
2.29
0.00
43.35
6.53
3969
4606
1.959738
GTATAGGCCGGGAAAGCGC
60.960
63.158
2.18
0.00
0.00
5.92
3970
4607
1.301479
GGTATAGGCCGGGAAAGCG
60.301
63.158
2.18
0.00
0.00
4.68
3971
4608
1.072678
GGGTATAGGCCGGGAAAGC
59.927
63.158
2.18
0.00
0.00
3.51
3972
4609
0.108019
GTGGGTATAGGCCGGGAAAG
59.892
60.000
2.18
0.00
0.00
2.62
3973
4610
1.688269
CGTGGGTATAGGCCGGGAAA
61.688
60.000
2.18
0.00
0.00
3.13
3974
4611
2.135581
CGTGGGTATAGGCCGGGAA
61.136
63.158
2.18
0.00
0.00
3.97
3975
4612
2.522436
CGTGGGTATAGGCCGGGA
60.522
66.667
2.18
0.00
0.00
5.14
3976
4613
4.309950
GCGTGGGTATAGGCCGGG
62.310
72.222
2.18
0.00
0.00
5.73
3977
4614
3.515316
CTGCGTGGGTATAGGCCGG
62.515
68.421
0.00
0.00
0.00
6.13
3978
4615
2.029073
CTGCGTGGGTATAGGCCG
59.971
66.667
0.00
0.00
0.00
6.13
3979
4616
2.280865
GCTGCGTGGGTATAGGCC
60.281
66.667
0.00
0.00
0.00
5.19
3980
4617
1.595382
CAGCTGCGTGGGTATAGGC
60.595
63.158
0.00
0.00
0.00
3.93
3981
4618
1.595382
GCAGCTGCGTGGGTATAGG
60.595
63.158
25.23
0.00
0.00
2.57
3982
4619
1.595382
GGCAGCTGCGTGGGTATAG
60.595
63.158
31.19
0.00
43.26
1.31
3983
4620
2.504032
GGCAGCTGCGTGGGTATA
59.496
61.111
31.19
0.00
43.26
1.47
3984
4621
4.838152
CGGCAGCTGCGTGGGTAT
62.838
66.667
31.19
0.00
43.26
2.73
3995
4632
4.847444
GGAGGAGGAAGCGGCAGC
62.847
72.222
0.00
0.00
45.58
5.25
3996
4633
4.168291
GGGAGGAGGAAGCGGCAG
62.168
72.222
1.45
0.00
0.00
4.85
3997
4634
4.722535
AGGGAGGAGGAAGCGGCA
62.723
66.667
1.45
0.00
0.00
5.69
3998
4635
3.855853
GAGGGAGGAGGAAGCGGC
61.856
72.222
0.00
0.00
0.00
6.53
3999
4636
3.157949
GGAGGGAGGAGGAAGCGG
61.158
72.222
0.00
0.00
0.00
5.52
4000
4637
2.364317
TGGAGGGAGGAGGAAGCG
60.364
66.667
0.00
0.00
0.00
4.68
4001
4638
1.306568
ACTGGAGGGAGGAGGAAGC
60.307
63.158
0.00
0.00
0.00
3.86
4002
4639
1.040339
CGACTGGAGGGAGGAGGAAG
61.040
65.000
0.00
0.00
0.00
3.46
4003
4640
1.000486
CGACTGGAGGGAGGAGGAA
60.000
63.158
0.00
0.00
0.00
3.36
4004
4641
2.684104
CGACTGGAGGGAGGAGGA
59.316
66.667
0.00
0.00
0.00
3.71
4005
4642
3.151022
GCGACTGGAGGGAGGAGG
61.151
72.222
0.00
0.00
0.00
4.30
4006
4643
3.151022
GGCGACTGGAGGGAGGAG
61.151
72.222
0.00
0.00
0.00
3.69
4009
4646
3.827898
GACGGCGACTGGAGGGAG
61.828
72.222
16.62
0.00
0.00
4.30
4033
4670
4.520846
GAAGGAATGGCACGCGCG
62.521
66.667
30.96
30.96
39.92
6.86
4034
4671
4.520846
CGAAGGAATGGCACGCGC
62.521
66.667
5.73
0.00
37.44
6.86
4035
4672
2.813474
TCGAAGGAATGGCACGCG
60.813
61.111
3.53
3.53
0.00
6.01
4036
4673
2.785258
GTCGAAGGAATGGCACGC
59.215
61.111
0.00
0.00
0.00
5.34
4037
4674
1.011968
TTCGTCGAAGGAATGGCACG
61.012
55.000
2.90
0.00
0.00
5.34
4038
4675
0.442699
GTTCGTCGAAGGAATGGCAC
59.557
55.000
8.18
0.00
0.00
5.01
4039
4676
0.034198
TGTTCGTCGAAGGAATGGCA
59.966
50.000
8.18
0.00
0.00
4.92
4040
4677
1.136057
GTTGTTCGTCGAAGGAATGGC
60.136
52.381
8.18
0.00
0.00
4.40
4041
4678
1.126113
CGTTGTTCGTCGAAGGAATGG
59.874
52.381
8.18
0.00
34.52
3.16
4042
4679
1.461888
GCGTTGTTCGTCGAAGGAATG
60.462
52.381
8.18
10.55
42.13
2.67
4043
4680
0.788391
GCGTTGTTCGTCGAAGGAAT
59.212
50.000
8.18
0.00
42.13
3.01
4044
4681
1.216941
GGCGTTGTTCGTCGAAGGAA
61.217
55.000
8.18
1.56
42.13
3.36
4045
4682
1.662446
GGCGTTGTTCGTCGAAGGA
60.662
57.895
8.18
0.00
42.13
3.36
4046
4683
2.851104
GGCGTTGTTCGTCGAAGG
59.149
61.111
8.18
0.00
42.13
3.46
4051
4688
2.654912
CGGTCAGGCGTTGTTCGTC
61.655
63.158
0.00
0.00
45.26
4.20
4052
4689
2.660552
CGGTCAGGCGTTGTTCGT
60.661
61.111
0.00
0.00
42.13
3.85
4053
4690
4.072088
GCGGTCAGGCGTTGTTCG
62.072
66.667
0.00
0.00
43.12
3.95
4054
4691
2.665185
AGCGGTCAGGCGTTGTTC
60.665
61.111
0.00
0.00
38.18
3.18
4055
4692
2.665185
GAGCGGTCAGGCGTTGTT
60.665
61.111
10.30
0.00
38.18
2.83
4056
4693
3.923864
TGAGCGGTCAGGCGTTGT
61.924
61.111
14.39
0.00
38.18
3.32
4057
4694
2.486636
TAGTGAGCGGTCAGGCGTTG
62.487
60.000
19.24
0.00
38.18
4.10
4058
4695
2.273179
TAGTGAGCGGTCAGGCGTT
61.273
57.895
19.24
4.30
38.18
4.84
4059
4696
2.675423
TAGTGAGCGGTCAGGCGT
60.675
61.111
19.24
5.77
38.18
5.68
4060
4697
2.202623
GTAGTGAGCGGTCAGGCG
60.203
66.667
19.24
0.00
38.18
5.52
4061
4698
2.184579
GGTAGTGAGCGGTCAGGC
59.815
66.667
19.24
7.38
31.53
4.85
4062
4699
2.490217
CGGTAGTGAGCGGTCAGG
59.510
66.667
19.24
1.43
42.86
3.86
4063
4700
2.202623
GCGGTAGTGAGCGGTCAG
60.203
66.667
19.24
7.01
46.62
3.51
4067
4704
4.554363
CCGAGCGGTAGTGAGCGG
62.554
72.222
0.00
0.00
46.62
5.52
4083
4720
3.670377
GAACACCTTGTGGGCGCC
61.670
66.667
21.18
21.18
37.94
6.53
4084
4721
4.025401
CGAACACCTTGTGGGCGC
62.025
66.667
0.00
0.00
37.94
6.53
4085
4722
2.280524
TCGAACACCTTGTGGGCG
60.281
61.111
0.00
2.47
37.94
6.13
4086
4723
1.098712
TTGTCGAACACCTTGTGGGC
61.099
55.000
0.00
0.00
37.94
5.36
4087
4724
1.384525
TTTGTCGAACACCTTGTGGG
58.615
50.000
0.00
0.00
37.94
4.61
4088
4725
2.789779
CGTTTTGTCGAACACCTTGTGG
60.790
50.000
0.00
0.00
37.94
4.17
4089
4726
2.436670
CGTTTTGTCGAACACCTTGTG
58.563
47.619
0.00
0.00
39.75
3.33
4090
4727
1.202098
GCGTTTTGTCGAACACCTTGT
60.202
47.619
0.00
0.00
0.00
3.16
4091
4728
1.063469
AGCGTTTTGTCGAACACCTTG
59.937
47.619
0.00
0.00
0.00
3.61
4092
4729
1.375551
AGCGTTTTGTCGAACACCTT
58.624
45.000
0.00
0.00
0.00
3.50
4093
4730
1.063469
CAAGCGTTTTGTCGAACACCT
59.937
47.619
0.00
0.00
0.00
4.00
4094
4731
1.462791
CAAGCGTTTTGTCGAACACC
58.537
50.000
0.00
0.00
0.00
4.16
4095
4732
0.837605
GCAAGCGTTTTGTCGAACAC
59.162
50.000
0.00
0.00
0.00
3.32
4096
4733
0.448197
TGCAAGCGTTTTGTCGAACA
59.552
45.000
0.00
0.00
0.00
3.18
4097
4734
1.512771
CTTGCAAGCGTTTTGTCGAAC
59.487
47.619
14.65
0.00
0.00
3.95
4098
4735
1.532921
CCTTGCAAGCGTTTTGTCGAA
60.533
47.619
21.43
0.00
0.00
3.71
4099
4736
0.028770
CCTTGCAAGCGTTTTGTCGA
59.971
50.000
21.43
0.00
0.00
4.20
4100
4737
0.248458
ACCTTGCAAGCGTTTTGTCG
60.248
50.000
21.43
6.48
0.00
4.35
4101
4738
2.766970
TACCTTGCAAGCGTTTTGTC
57.233
45.000
21.43
0.00
0.00
3.18
4102
4739
2.360801
ACATACCTTGCAAGCGTTTTGT
59.639
40.909
21.43
19.93
0.00
2.83
4103
4740
3.011949
ACATACCTTGCAAGCGTTTTG
57.988
42.857
21.43
19.42
0.00
2.44
4104
4741
5.160641
CAATACATACCTTGCAAGCGTTTT
58.839
37.500
21.43
12.16
0.00
2.43
4105
4742
4.732784
CAATACATACCTTGCAAGCGTTT
58.267
39.130
21.43
12.09
0.00
3.60
4106
4743
3.427503
GCAATACATACCTTGCAAGCGTT
60.428
43.478
21.43
9.57
45.50
4.84
4107
4744
2.097466
GCAATACATACCTTGCAAGCGT
59.903
45.455
21.43
20.49
45.50
5.07
4108
4745
2.719798
GCAATACATACCTTGCAAGCG
58.280
47.619
21.43
15.97
45.50
4.68
4113
4750
5.567138
AGTTGAAGCAATACATACCTTGC
57.433
39.130
0.00
0.00
46.32
4.01
4114
4751
7.023575
GTCAAGTTGAAGCAATACATACCTTG
58.976
38.462
7.25
0.00
0.00
3.61
4115
4752
6.714810
TGTCAAGTTGAAGCAATACATACCTT
59.285
34.615
7.25
0.00
0.00
3.50
4116
4753
6.237901
TGTCAAGTTGAAGCAATACATACCT
58.762
36.000
7.25
0.00
0.00
3.08
4117
4754
6.494893
TGTCAAGTTGAAGCAATACATACC
57.505
37.500
7.25
0.00
0.00
2.73
4118
4755
8.970691
AAATGTCAAGTTGAAGCAATACATAC
57.029
30.769
7.25
0.00
0.00
2.39
4119
4756
9.979578
AAAAATGTCAAGTTGAAGCAATACATA
57.020
25.926
7.25
0.00
0.00
2.29
4120
4757
8.891671
AAAAATGTCAAGTTGAAGCAATACAT
57.108
26.923
7.25
2.78
0.00
2.29
4142
4779
7.281774
ACAACATGCACCAAATTCATGTAAAAA
59.718
29.630
9.40
0.00
46.92
1.94
4143
4780
6.765036
ACAACATGCACCAAATTCATGTAAAA
59.235
30.769
9.40
0.00
46.92
1.52
4144
4781
6.286758
ACAACATGCACCAAATTCATGTAAA
58.713
32.000
9.40
0.00
46.92
2.01
4145
4782
5.851720
ACAACATGCACCAAATTCATGTAA
58.148
33.333
9.40
0.00
46.92
2.41
4146
4783
5.465532
ACAACATGCACCAAATTCATGTA
57.534
34.783
9.40
0.00
46.92
2.29
4148
4785
5.007823
ACAAACAACATGCACCAAATTCATG
59.992
36.000
0.00
3.25
42.27
3.07
4149
4786
5.124645
ACAAACAACATGCACCAAATTCAT
58.875
33.333
0.00
0.00
0.00
2.57
4150
4787
4.511527
ACAAACAACATGCACCAAATTCA
58.488
34.783
0.00
0.00
0.00
2.57
4151
4788
5.752955
ACTACAAACAACATGCACCAAATTC
59.247
36.000
0.00
0.00
0.00
2.17
4152
4789
5.669477
ACTACAAACAACATGCACCAAATT
58.331
33.333
0.00
0.00
0.00
1.82
4153
4790
5.275067
ACTACAAACAACATGCACCAAAT
57.725
34.783
0.00
0.00
0.00
2.32
4154
4791
4.727507
ACTACAAACAACATGCACCAAA
57.272
36.364
0.00
0.00
0.00
3.28
4155
4792
4.727507
AACTACAAACAACATGCACCAA
57.272
36.364
0.00
0.00
0.00
3.67
4156
4793
4.727507
AAACTACAAACAACATGCACCA
57.272
36.364
0.00
0.00
0.00
4.17
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.