Multiple sequence alignment - TraesCS6A01G246700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G246700 | chr6A | 100.000 | 4334 | 0 | 0 | 1 | 4334 | 457616363 | 457620696 | 0.000000e+00 | 8004.0 |
1 | TraesCS6A01G246700 | chr6A | 87.828 | 534 | 59 | 6 | 2 | 533 | 6997320 | 6996791 | 4.760000e-174 | 621.0 |
2 | TraesCS6A01G246700 | chr6A | 91.045 | 134 | 12 | 0 | 3332 | 3465 | 24845066 | 24844933 | 9.570000e-42 | 182.0 |
3 | TraesCS6A01G246700 | chr6D | 95.896 | 3338 | 116 | 12 | 1 | 3333 | 320111090 | 320114411 | 0.000000e+00 | 5385.0 |
4 | TraesCS6A01G246700 | chr6D | 85.078 | 449 | 64 | 3 | 3887 | 4334 | 320115996 | 320116442 | 5.110000e-124 | 455.0 |
5 | TraesCS6A01G246700 | chr6D | 94.030 | 67 | 4 | 0 | 3566 | 3632 | 320115376 | 320115442 | 7.670000e-18 | 102.0 |
6 | TraesCS6A01G246700 | chr6D | 93.478 | 46 | 3 | 0 | 3589 | 3634 | 320115879 | 320115924 | 7.780000e-08 | 69.4 |
7 | TraesCS6A01G246700 | chr6B | 96.782 | 2766 | 68 | 9 | 568 | 3332 | 502794601 | 502791856 | 0.000000e+00 | 4595.0 |
8 | TraesCS6A01G246700 | chr6B | 86.379 | 580 | 73 | 5 | 1 | 576 | 188722966 | 188722389 | 2.840000e-176 | 628.0 |
9 | TraesCS6A01G246700 | chr5D | 89.317 | 571 | 57 | 4 | 1 | 569 | 296662354 | 296662922 | 0.000000e+00 | 713.0 |
10 | TraesCS6A01G246700 | chr5D | 90.217 | 92 | 8 | 1 | 2338 | 2429 | 59236957 | 59236867 | 7.610000e-23 | 119.0 |
11 | TraesCS6A01G246700 | chr2A | 86.874 | 579 | 64 | 6 | 1 | 569 | 32819020 | 32819596 | 4.730000e-179 | 638.0 |
12 | TraesCS6A01G246700 | chr2A | 77.686 | 121 | 25 | 2 | 2364 | 2483 | 761622397 | 761622278 | 6.010000e-09 | 73.1 |
13 | TraesCS6A01G246700 | chr5B | 86.806 | 576 | 68 | 6 | 1 | 572 | 6875006 | 6874435 | 1.700000e-178 | 636.0 |
14 | TraesCS6A01G246700 | chr7A | 86.159 | 578 | 73 | 7 | 3 | 576 | 668775404 | 668775978 | 6.160000e-173 | 617.0 |
15 | TraesCS6A01G246700 | chr7A | 71.912 | 591 | 127 | 33 | 2162 | 2737 | 680576028 | 680575462 | 7.560000e-28 | 135.0 |
16 | TraesCS6A01G246700 | chr7D | 86.063 | 574 | 67 | 10 | 1 | 572 | 478376505 | 478375943 | 4.790000e-169 | 604.0 |
17 | TraesCS6A01G246700 | chr7D | 73.933 | 445 | 87 | 23 | 2162 | 2596 | 589318186 | 589317761 | 7.510000e-33 | 152.0 |
18 | TraesCS6A01G246700 | chr3D | 85.147 | 579 | 80 | 6 | 1 | 576 | 576159904 | 576160479 | 4.830000e-164 | 588.0 |
19 | TraesCS6A01G246700 | chr2B | 96.324 | 136 | 5 | 0 | 3331 | 3466 | 1665744 | 1665879 | 1.570000e-54 | 224.0 |
20 | TraesCS6A01G246700 | chr2B | 90.361 | 83 | 7 | 1 | 2351 | 2433 | 716287857 | 716287938 | 1.650000e-19 | 108.0 |
21 | TraesCS6A01G246700 | chr5A | 96.154 | 130 | 5 | 0 | 3334 | 3463 | 617897201 | 617897330 | 3.400000e-51 | 213.0 |
22 | TraesCS6A01G246700 | chr5A | 94.030 | 134 | 8 | 0 | 3330 | 3463 | 394810423 | 394810556 | 2.040000e-48 | 204.0 |
23 | TraesCS6A01G246700 | chr7B | 73.699 | 346 | 69 | 16 | 2153 | 2493 | 663488453 | 663488781 | 9.850000e-22 | 115.0 |
24 | TraesCS6A01G246700 | chr3B | 91.139 | 79 | 6 | 1 | 2351 | 2429 | 613570705 | 613570782 | 5.930000e-19 | 106.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G246700 | chr6A | 457616363 | 457620696 | 4333 | False | 8004.00 | 8004 | 100.0000 | 1 | 4334 | 1 | chr6A.!!$F1 | 4333 |
1 | TraesCS6A01G246700 | chr6A | 6996791 | 6997320 | 529 | True | 621.00 | 621 | 87.8280 | 2 | 533 | 1 | chr6A.!!$R1 | 531 |
2 | TraesCS6A01G246700 | chr6D | 320111090 | 320116442 | 5352 | False | 1502.85 | 5385 | 92.1205 | 1 | 4334 | 4 | chr6D.!!$F1 | 4333 |
3 | TraesCS6A01G246700 | chr6B | 502791856 | 502794601 | 2745 | True | 4595.00 | 4595 | 96.7820 | 568 | 3332 | 1 | chr6B.!!$R2 | 2764 |
4 | TraesCS6A01G246700 | chr6B | 188722389 | 188722966 | 577 | True | 628.00 | 628 | 86.3790 | 1 | 576 | 1 | chr6B.!!$R1 | 575 |
5 | TraesCS6A01G246700 | chr5D | 296662354 | 296662922 | 568 | False | 713.00 | 713 | 89.3170 | 1 | 569 | 1 | chr5D.!!$F1 | 568 |
6 | TraesCS6A01G246700 | chr2A | 32819020 | 32819596 | 576 | False | 638.00 | 638 | 86.8740 | 1 | 569 | 1 | chr2A.!!$F1 | 568 |
7 | TraesCS6A01G246700 | chr5B | 6874435 | 6875006 | 571 | True | 636.00 | 636 | 86.8060 | 1 | 572 | 1 | chr5B.!!$R1 | 571 |
8 | TraesCS6A01G246700 | chr7A | 668775404 | 668775978 | 574 | False | 617.00 | 617 | 86.1590 | 3 | 576 | 1 | chr7A.!!$F1 | 573 |
9 | TraesCS6A01G246700 | chr7D | 478375943 | 478376505 | 562 | True | 604.00 | 604 | 86.0630 | 1 | 572 | 1 | chr7D.!!$R1 | 571 |
10 | TraesCS6A01G246700 | chr3D | 576159904 | 576160479 | 575 | False | 588.00 | 588 | 85.1470 | 1 | 576 | 1 | chr3D.!!$F1 | 575 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
851 | 877 | 0.036765 | CAAAAGGCCATGCATGCACT | 60.037 | 50.0 | 25.37 | 17.10 | 0.0 | 4.40 | F |
854 | 880 | 1.039233 | AAGGCCATGCATGCACTACC | 61.039 | 55.0 | 25.37 | 22.92 | 0.0 | 3.18 | F |
1871 | 1899 | 0.391661 | CACGTCCACATCCCCTTCAG | 60.392 | 60.0 | 0.00 | 0.00 | 0.0 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1866 | 1894 | 1.412606 | GCGTTCGAAGTCGCTGAAG | 59.587 | 57.895 | 21.62 | 0.00 | 44.32 | 3.02 | R |
2546 | 2574 | 1.452108 | GGGCAGTGGTAGTGCATCC | 60.452 | 63.158 | 10.44 | 0.00 | 46.06 | 3.51 | R |
3681 | 4577 | 0.167470 | TAGGTCGACTCGAGTTTGCG | 59.833 | 55.000 | 21.08 | 18.45 | 36.23 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 3.897141 | TCAAGGTGATACAACCGCATA | 57.103 | 42.857 | 0.00 | 0.00 | 45.53 | 3.14 |
52 | 53 | 3.157087 | CATATAAAGAATGCCCGGCCTT | 58.843 | 45.455 | 7.03 | 2.66 | 0.00 | 4.35 |
91 | 94 | 4.201910 | ACACATTCAACAAGTCCAAACGAG | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
153 | 156 | 0.762461 | GCCTAGGGTGGAGCAGATCT | 60.762 | 60.000 | 11.72 | 0.00 | 0.00 | 2.75 |
244 | 247 | 6.582636 | AGACGCCATCATAAAAATGTCTCTA | 58.417 | 36.000 | 0.00 | 0.00 | 30.06 | 2.43 |
249 | 252 | 7.173907 | CGCCATCATAAAAATGTCTCTATCCTT | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
268 | 271 | 3.320541 | CCTTCGACTTCTGCAGGATAGAT | 59.679 | 47.826 | 15.13 | 0.88 | 0.00 | 1.98 |
287 | 290 | 1.153647 | CAAGTACGGAGCCATCGCA | 60.154 | 57.895 | 0.00 | 0.00 | 37.52 | 5.10 |
290 | 293 | 1.257743 | AGTACGGAGCCATCGCATAT | 58.742 | 50.000 | 0.00 | 0.00 | 37.52 | 1.78 |
369 | 375 | 0.897863 | TGGTAAGCCACAATGCCCAC | 60.898 | 55.000 | 0.00 | 0.00 | 40.46 | 4.61 |
383 | 389 | 1.173913 | GCCCACCATAAGACAACCAC | 58.826 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
389 | 395 | 1.287739 | CCATAAGACAACCACCCCCAT | 59.712 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
390 | 396 | 2.512056 | CCATAAGACAACCACCCCCATA | 59.488 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
395 | 401 | 4.140575 | AGACAACCACCCCCATAAAAAT | 57.859 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
409 | 415 | 9.594478 | CCCCCATAAAAATAATGTACAGAAAAC | 57.406 | 33.333 | 0.33 | 0.00 | 0.00 | 2.43 |
423 | 429 | 8.500753 | TGTACAGAAAACTGTTTGTCAATACT | 57.499 | 30.769 | 6.53 | 0.00 | 38.64 | 2.12 |
505 | 522 | 6.900194 | ACTTAAACTATGACCCATACTGCAT | 58.100 | 36.000 | 0.00 | 0.00 | 0.00 | 3.96 |
563 | 581 | 5.014858 | AGACTCATCATGTTGGCAAAAGAT | 58.985 | 37.500 | 0.00 | 2.91 | 0.00 | 2.40 |
598 | 616 | 4.350425 | CGTATAACGCAGGTTCATAACG | 57.650 | 45.455 | 0.00 | 0.00 | 37.58 | 3.18 |
623 | 641 | 2.759114 | CCTGGCCAAGGCTTGAGA | 59.241 | 61.111 | 28.18 | 10.29 | 39.93 | 3.27 |
701 | 720 | 0.246757 | GCACACGCGATGTTCGTTAG | 60.247 | 55.000 | 15.93 | 1.85 | 40.64 | 2.34 |
702 | 721 | 1.057636 | CACACGCGATGTTCGTTAGT | 58.942 | 50.000 | 15.93 | 0.00 | 40.64 | 2.24 |
703 | 722 | 2.244251 | CACACGCGATGTTCGTTAGTA | 58.756 | 47.619 | 15.93 | 0.00 | 40.64 | 1.82 |
720 | 739 | 5.620205 | CGTTAGTACTCTGCTGAAGTCATGT | 60.620 | 44.000 | 0.00 | 0.00 | 0.00 | 3.21 |
740 | 761 | 1.063972 | CCAACATGGTAATGCGGCG | 59.936 | 57.895 | 0.51 | 0.51 | 37.29 | 6.46 |
741 | 762 | 1.063972 | CAACATGGTAATGCGGCGG | 59.936 | 57.895 | 9.78 | 0.00 | 37.29 | 6.13 |
744 | 765 | 1.596752 | CATGGTAATGCGGCGGCTA | 60.597 | 57.895 | 17.76 | 4.42 | 40.82 | 3.93 |
746 | 767 | 2.040009 | ATGGTAATGCGGCGGCTACT | 62.040 | 55.000 | 17.76 | 4.38 | 40.82 | 2.57 |
748 | 769 | 1.496403 | GGTAATGCGGCGGCTACTTC | 61.496 | 60.000 | 17.76 | 4.49 | 40.82 | 3.01 |
750 | 771 | 1.682451 | TAATGCGGCGGCTACTTCCT | 61.682 | 55.000 | 17.76 | 0.00 | 40.82 | 3.36 |
751 | 772 | 2.536997 | AATGCGGCGGCTACTTCCTT | 62.537 | 55.000 | 17.76 | 0.00 | 40.82 | 3.36 |
752 | 773 | 2.890961 | GCGGCGGCTACTTCCTTC | 60.891 | 66.667 | 9.78 | 0.00 | 35.83 | 3.46 |
753 | 774 | 2.893398 | CGGCGGCTACTTCCTTCT | 59.107 | 61.111 | 7.61 | 0.00 | 0.00 | 2.85 |
754 | 775 | 1.227002 | CGGCGGCTACTTCCTTCTC | 60.227 | 63.158 | 7.61 | 0.00 | 0.00 | 2.87 |
755 | 776 | 1.668101 | CGGCGGCTACTTCCTTCTCT | 61.668 | 60.000 | 7.61 | 0.00 | 0.00 | 3.10 |
799 | 820 | 2.203280 | CCCAACGTCCCACAGCAA | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
800 | 821 | 1.826054 | CCCAACGTCCCACAGCAAA | 60.826 | 57.895 | 0.00 | 0.00 | 0.00 | 3.68 |
801 | 822 | 1.358759 | CCAACGTCCCACAGCAAAC | 59.641 | 57.895 | 0.00 | 0.00 | 0.00 | 2.93 |
802 | 823 | 1.358759 | CAACGTCCCACAGCAAACC | 59.641 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
803 | 824 | 1.077357 | AACGTCCCACAGCAAACCA | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 3.67 |
851 | 877 | 0.036765 | CAAAAGGCCATGCATGCACT | 60.037 | 50.000 | 25.37 | 17.10 | 0.00 | 4.40 |
852 | 878 | 1.205179 | CAAAAGGCCATGCATGCACTA | 59.795 | 47.619 | 25.37 | 0.00 | 0.00 | 2.74 |
854 | 880 | 1.039233 | AAGGCCATGCATGCACTACC | 61.039 | 55.000 | 25.37 | 22.92 | 0.00 | 3.18 |
855 | 881 | 2.492773 | GGCCATGCATGCACTACCC | 61.493 | 63.158 | 25.37 | 16.82 | 0.00 | 3.69 |
1254 | 1282 | 1.519455 | CCACATCGAGAAGACCGCC | 60.519 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
1288 | 1316 | 1.737008 | GACGTGTTCGCCTTCTCCC | 60.737 | 63.158 | 0.00 | 0.00 | 41.18 | 4.30 |
1866 | 1894 | 4.796495 | GGCCACGTCCACATCCCC | 62.796 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
1871 | 1899 | 0.391661 | CACGTCCACATCCCCTTCAG | 60.392 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1920 | 1948 | 1.227176 | GATTCGCCCGAGGTGGTAC | 60.227 | 63.158 | 4.03 | 0.00 | 35.15 | 3.34 |
2097 | 2125 | 2.196997 | CTCCCATTGGCCTCGTGGAA | 62.197 | 60.000 | 19.22 | 2.34 | 34.94 | 3.53 |
2110 | 2138 | 2.668632 | TGGAACTCGGCATCCACC | 59.331 | 61.111 | 0.66 | 0.00 | 40.74 | 4.61 |
2268 | 2296 | 1.079543 | CTTCTGGGAGGTGCACGAG | 60.080 | 63.158 | 11.45 | 1.62 | 0.00 | 4.18 |
2289 | 2317 | 4.539083 | TGCACCGTGCTCACCGTT | 62.539 | 61.111 | 23.52 | 0.00 | 45.31 | 4.44 |
2475 | 2503 | 0.985490 | AGAAGATGGGGGAGCTCCAC | 60.985 | 60.000 | 33.29 | 30.86 | 40.15 | 4.02 |
3168 | 3196 | 2.108514 | CACGGCCATGTACCTGCTG | 61.109 | 63.158 | 2.24 | 5.84 | 37.40 | 4.41 |
3333 | 3361 | 2.134789 | AGGTGGATTGCCTGCTTTAG | 57.865 | 50.000 | 0.00 | 0.00 | 34.56 | 1.85 |
3342 | 3370 | 2.873797 | CCTGCTTTAGGCCCTGTTC | 58.126 | 57.895 | 0.00 | 0.00 | 40.38 | 3.18 |
3343 | 3371 | 1.026718 | CCTGCTTTAGGCCCTGTTCG | 61.027 | 60.000 | 0.00 | 0.00 | 40.38 | 3.95 |
3344 | 3372 | 1.002624 | TGCTTTAGGCCCTGTTCGG | 60.003 | 57.895 | 0.00 | 0.00 | 40.92 | 4.30 |
3345 | 3373 | 1.298667 | GCTTTAGGCCCTGTTCGGA | 59.701 | 57.895 | 0.00 | 0.00 | 33.16 | 4.55 |
3346 | 3374 | 0.322187 | GCTTTAGGCCCTGTTCGGAA | 60.322 | 55.000 | 0.00 | 0.00 | 33.16 | 4.30 |
3347 | 3375 | 1.450025 | CTTTAGGCCCTGTTCGGAAC | 58.550 | 55.000 | 13.86 | 13.86 | 33.16 | 3.62 |
3348 | 3376 | 1.003233 | CTTTAGGCCCTGTTCGGAACT | 59.997 | 52.381 | 20.53 | 3.18 | 33.16 | 3.01 |
3349 | 3377 | 1.061546 | TTAGGCCCTGTTCGGAACTT | 58.938 | 50.000 | 20.53 | 3.85 | 33.16 | 2.66 |
3350 | 3378 | 0.323629 | TAGGCCCTGTTCGGAACTTG | 59.676 | 55.000 | 20.53 | 13.22 | 33.16 | 3.16 |
3351 | 3379 | 1.971695 | GGCCCTGTTCGGAACTTGG | 60.972 | 63.158 | 20.53 | 19.54 | 33.16 | 3.61 |
3352 | 3380 | 2.626780 | GCCCTGTTCGGAACTTGGC | 61.627 | 63.158 | 26.60 | 26.60 | 39.99 | 4.52 |
3353 | 3381 | 1.971695 | CCCTGTTCGGAACTTGGCC | 60.972 | 63.158 | 20.53 | 0.00 | 33.16 | 5.36 |
3376 | 3404 | 4.785453 | GCGGAGTTGGGGAGCTGG | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
3377 | 3405 | 4.785453 | CGGAGTTGGGGAGCTGGC | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
3378 | 3406 | 3.334054 | GGAGTTGGGGAGCTGGCT | 61.334 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
3379 | 3407 | 2.759795 | GAGTTGGGGAGCTGGCTT | 59.240 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
3380 | 3408 | 1.075659 | GAGTTGGGGAGCTGGCTTT | 59.924 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
3381 | 3409 | 0.540597 | GAGTTGGGGAGCTGGCTTTT | 60.541 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
3382 | 3410 | 0.777446 | AGTTGGGGAGCTGGCTTTTA | 59.223 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
3383 | 3411 | 1.177401 | GTTGGGGAGCTGGCTTTTAG | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3384 | 3412 | 0.611896 | TTGGGGAGCTGGCTTTTAGC | 60.612 | 55.000 | 0.00 | 0.00 | 41.46 | 3.09 |
3385 | 3413 | 1.000896 | GGGGAGCTGGCTTTTAGCA | 60.001 | 57.895 | 0.00 | 0.00 | 44.75 | 3.49 |
3386 | 3414 | 1.034292 | GGGGAGCTGGCTTTTAGCAG | 61.034 | 60.000 | 0.00 | 0.00 | 44.75 | 4.24 |
3387 | 3415 | 1.661498 | GGGAGCTGGCTTTTAGCAGC | 61.661 | 60.000 | 0.00 | 0.00 | 44.75 | 5.25 |
3389 | 3417 | 3.353342 | AGCTGGCTTTTAGCAGCTT | 57.647 | 47.368 | 0.00 | 5.30 | 46.07 | 3.74 |
3390 | 3418 | 1.172175 | AGCTGGCTTTTAGCAGCTTC | 58.828 | 50.000 | 0.00 | 0.00 | 46.07 | 3.86 |
3391 | 3419 | 0.883833 | GCTGGCTTTTAGCAGCTTCA | 59.116 | 50.000 | 0.00 | 0.00 | 44.75 | 3.02 |
3392 | 3420 | 1.475682 | GCTGGCTTTTAGCAGCTTCAT | 59.524 | 47.619 | 0.00 | 0.00 | 44.75 | 2.57 |
3393 | 3421 | 2.479219 | GCTGGCTTTTAGCAGCTTCATC | 60.479 | 50.000 | 0.00 | 0.00 | 44.75 | 2.92 |
3394 | 3422 | 2.751259 | CTGGCTTTTAGCAGCTTCATCA | 59.249 | 45.455 | 0.00 | 0.00 | 44.75 | 3.07 |
3395 | 3423 | 3.156293 | TGGCTTTTAGCAGCTTCATCAA | 58.844 | 40.909 | 0.00 | 0.00 | 44.75 | 2.57 |
3396 | 3424 | 3.573538 | TGGCTTTTAGCAGCTTCATCAAA | 59.426 | 39.130 | 0.00 | 0.00 | 44.75 | 2.69 |
3397 | 3425 | 4.221262 | TGGCTTTTAGCAGCTTCATCAAAT | 59.779 | 37.500 | 0.00 | 0.00 | 44.75 | 2.32 |
3398 | 3426 | 5.173664 | GGCTTTTAGCAGCTTCATCAAATT | 58.826 | 37.500 | 0.00 | 0.00 | 44.75 | 1.82 |
3399 | 3427 | 6.071447 | TGGCTTTTAGCAGCTTCATCAAATTA | 60.071 | 34.615 | 0.00 | 0.00 | 44.75 | 1.40 |
3400 | 3428 | 6.813152 | GGCTTTTAGCAGCTTCATCAAATTAA | 59.187 | 34.615 | 0.00 | 0.00 | 44.75 | 1.40 |
3401 | 3429 | 7.009907 | GGCTTTTAGCAGCTTCATCAAATTAAG | 59.990 | 37.037 | 0.00 | 0.00 | 44.75 | 1.85 |
3402 | 3430 | 7.463780 | GCTTTTAGCAGCTTCATCAAATTAAGC | 60.464 | 37.037 | 0.00 | 2.28 | 44.70 | 3.09 |
3412 | 3440 | 9.070149 | GCTTCATCAAATTAAGCTAAAGTCTTG | 57.930 | 33.333 | 3.18 | 0.00 | 41.85 | 3.02 |
3415 | 3443 | 8.730680 | TCATCAAATTAAGCTAAAGTCTTGTCC | 58.269 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
3416 | 3444 | 8.514594 | CATCAAATTAAGCTAAAGTCTTGTCCA | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
3417 | 3445 | 7.871853 | TCAAATTAAGCTAAAGTCTTGTCCAC | 58.128 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
3418 | 3446 | 7.719633 | TCAAATTAAGCTAAAGTCTTGTCCACT | 59.280 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
3419 | 3447 | 7.674471 | AATTAAGCTAAAGTCTTGTCCACTC | 57.326 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3420 | 3448 | 3.686916 | AGCTAAAGTCTTGTCCACTCC | 57.313 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
3421 | 3449 | 2.303311 | AGCTAAAGTCTTGTCCACTCCC | 59.697 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3422 | 3450 | 2.931320 | GCTAAAGTCTTGTCCACTCCCG | 60.931 | 54.545 | 0.00 | 0.00 | 0.00 | 5.14 |
3423 | 3451 | 0.396811 | AAAGTCTTGTCCACTCCCGG | 59.603 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3424 | 3452 | 0.471211 | AAGTCTTGTCCACTCCCGGA | 60.471 | 55.000 | 0.73 | 0.00 | 0.00 | 5.14 |
3425 | 3453 | 0.900647 | AGTCTTGTCCACTCCCGGAG | 60.901 | 60.000 | 13.31 | 13.31 | 35.10 | 4.63 |
3426 | 3454 | 1.155390 | TCTTGTCCACTCCCGGAGT | 59.845 | 57.895 | 14.84 | 14.84 | 44.44 | 3.85 |
3436 | 3464 | 2.674796 | CTCCCGGAGTGGAGTTAAAG | 57.325 | 55.000 | 0.73 | 0.00 | 45.76 | 1.85 |
3437 | 3465 | 2.176889 | CTCCCGGAGTGGAGTTAAAGA | 58.823 | 52.381 | 0.73 | 0.00 | 45.76 | 2.52 |
3438 | 3466 | 2.565834 | CTCCCGGAGTGGAGTTAAAGAA | 59.434 | 50.000 | 0.73 | 0.00 | 45.76 | 2.52 |
3439 | 3467 | 2.565834 | TCCCGGAGTGGAGTTAAAGAAG | 59.434 | 50.000 | 0.73 | 0.00 | 42.00 | 2.85 |
3440 | 3468 | 2.302157 | CCCGGAGTGGAGTTAAAGAAGT | 59.698 | 50.000 | 0.73 | 0.00 | 42.00 | 3.01 |
3441 | 3469 | 3.512724 | CCCGGAGTGGAGTTAAAGAAGTA | 59.487 | 47.826 | 0.73 | 0.00 | 42.00 | 2.24 |
3442 | 3470 | 4.381718 | CCCGGAGTGGAGTTAAAGAAGTAG | 60.382 | 50.000 | 0.73 | 0.00 | 42.00 | 2.57 |
3443 | 3471 | 4.461781 | CCGGAGTGGAGTTAAAGAAGTAGA | 59.538 | 45.833 | 0.00 | 0.00 | 42.00 | 2.59 |
3444 | 3472 | 5.393243 | CCGGAGTGGAGTTAAAGAAGTAGAG | 60.393 | 48.000 | 0.00 | 0.00 | 42.00 | 2.43 |
3445 | 3473 | 5.415077 | CGGAGTGGAGTTAAAGAAGTAGAGA | 59.585 | 44.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3446 | 3474 | 6.403855 | CGGAGTGGAGTTAAAGAAGTAGAGAG | 60.404 | 46.154 | 0.00 | 0.00 | 0.00 | 3.20 |
3447 | 3475 | 6.660094 | GGAGTGGAGTTAAAGAAGTAGAGAGA | 59.340 | 42.308 | 0.00 | 0.00 | 0.00 | 3.10 |
3448 | 3476 | 7.177041 | GGAGTGGAGTTAAAGAAGTAGAGAGAA | 59.823 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
3449 | 3477 | 8.480133 | AGTGGAGTTAAAGAAGTAGAGAGAAA | 57.520 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
3450 | 3478 | 8.361889 | AGTGGAGTTAAAGAAGTAGAGAGAAAC | 58.638 | 37.037 | 0.00 | 0.00 | 0.00 | 2.78 |
3451 | 3479 | 7.599621 | GTGGAGTTAAAGAAGTAGAGAGAAACC | 59.400 | 40.741 | 0.00 | 0.00 | 0.00 | 3.27 |
3452 | 3480 | 6.807720 | GGAGTTAAAGAAGTAGAGAGAAACCG | 59.192 | 42.308 | 0.00 | 0.00 | 0.00 | 4.44 |
3453 | 3481 | 7.309073 | GGAGTTAAAGAAGTAGAGAGAAACCGA | 60.309 | 40.741 | 0.00 | 0.00 | 0.00 | 4.69 |
3454 | 3482 | 7.949434 | AGTTAAAGAAGTAGAGAGAAACCGAA | 58.051 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
3455 | 3483 | 7.866898 | AGTTAAAGAAGTAGAGAGAAACCGAAC | 59.133 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
3456 | 3484 | 5.786264 | AAGAAGTAGAGAGAAACCGAACA | 57.214 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3457 | 3485 | 5.123805 | AGAAGTAGAGAGAAACCGAACAC | 57.876 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
3458 | 3486 | 4.583489 | AGAAGTAGAGAGAAACCGAACACA | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
3459 | 3487 | 4.506886 | AGTAGAGAGAAACCGAACACAG | 57.493 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
3460 | 3488 | 2.156343 | AGAGAGAAACCGAACACAGC | 57.844 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3461 | 3489 | 1.149148 | GAGAGAAACCGAACACAGCC | 58.851 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3462 | 3490 | 0.759346 | AGAGAAACCGAACACAGCCT | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
3463 | 3491 | 1.141053 | AGAGAAACCGAACACAGCCTT | 59.859 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3464 | 3492 | 2.367567 | AGAGAAACCGAACACAGCCTTA | 59.632 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
3465 | 3493 | 3.135994 | GAGAAACCGAACACAGCCTTAA | 58.864 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
3466 | 3494 | 3.751518 | AGAAACCGAACACAGCCTTAAT | 58.248 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3467 | 3495 | 3.751698 | AGAAACCGAACACAGCCTTAATC | 59.248 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
3486 | 3514 | 3.096489 | TCAGAGCACATTTTGGTTTGC | 57.904 | 42.857 | 0.00 | 0.00 | 37.65 | 3.68 |
3491 | 3519 | 2.036346 | AGCACATTTTGGTTTGCTCCTC | 59.964 | 45.455 | 0.00 | 0.00 | 41.53 | 3.71 |
3507 | 3535 | 3.093057 | CTCCTCCTGTACTGCTGTTACT | 58.907 | 50.000 | 0.09 | 0.00 | 0.00 | 2.24 |
3508 | 3536 | 3.507411 | TCCTCCTGTACTGCTGTTACTT | 58.493 | 45.455 | 0.09 | 0.00 | 0.00 | 2.24 |
3509 | 3537 | 3.901844 | TCCTCCTGTACTGCTGTTACTTT | 59.098 | 43.478 | 0.09 | 0.00 | 0.00 | 2.66 |
3546 | 3574 | 7.770366 | AAAAATTGTAGTATTCCCTTCCGTT | 57.230 | 32.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3557 | 3585 | 8.591940 | AGTATTCCCTTCCGTTATTATTACTCC | 58.408 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
3561 | 3589 | 5.071384 | CCCTTCCGTTATTATTACTCCTGGT | 59.929 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3562 | 3590 | 6.221659 | CCTTCCGTTATTATTACTCCTGGTC | 58.778 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3564 | 3592 | 7.232127 | CCTTCCGTTATTATTACTCCTGGTCTA | 59.768 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
3593 | 4489 | 3.818787 | GGAGCAGCCAATGTGCCG | 61.819 | 66.667 | 0.00 | 0.00 | 42.24 | 5.69 |
3602 | 4498 | 1.597663 | GCCAATGTGCCGTATCTACAC | 59.402 | 52.381 | 0.00 | 0.00 | 34.86 | 2.90 |
3614 | 4510 | 4.574828 | CCGTATCTACACCCTCCAAAATTG | 59.425 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
3623 | 4519 | 5.221441 | ACACCCTCCAAAATTGTTTTAGAGC | 60.221 | 40.000 | 5.46 | 0.00 | 37.16 | 4.09 |
3632 | 4528 | 7.329226 | CCAAAATTGTTTTAGAGCATCGTTCAT | 59.671 | 33.333 | 0.00 | 0.00 | 42.67 | 2.57 |
3633 | 4529 | 9.340695 | CAAAATTGTTTTAGAGCATCGTTCATA | 57.659 | 29.630 | 0.00 | 0.00 | 42.67 | 2.15 |
3634 | 4530 | 9.906660 | AAAATTGTTTTAGAGCATCGTTCATAA | 57.093 | 25.926 | 0.00 | 0.00 | 42.67 | 1.90 |
3640 | 4536 | 9.159470 | GTTTTAGAGCATCGTTCATAATTAAGC | 57.841 | 33.333 | 0.00 | 0.00 | 42.67 | 3.09 |
3641 | 4537 | 5.931441 | AGAGCATCGTTCATAATTAAGCC | 57.069 | 39.130 | 0.00 | 0.00 | 42.67 | 4.35 |
3643 | 4539 | 6.759272 | AGAGCATCGTTCATAATTAAGCCTA | 58.241 | 36.000 | 0.00 | 0.00 | 42.67 | 3.93 |
3644 | 4540 | 7.390027 | AGAGCATCGTTCATAATTAAGCCTAT | 58.610 | 34.615 | 0.00 | 0.00 | 42.67 | 2.57 |
3645 | 4541 | 7.880195 | AGAGCATCGTTCATAATTAAGCCTATT | 59.120 | 33.333 | 0.00 | 0.00 | 42.67 | 1.73 |
3646 | 4542 | 8.396272 | AGCATCGTTCATAATTAAGCCTATTT | 57.604 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
3647 | 4543 | 8.507249 | AGCATCGTTCATAATTAAGCCTATTTC | 58.493 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
3648 | 4544 | 7.478667 | GCATCGTTCATAATTAAGCCTATTTCG | 59.521 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
3649 | 4545 | 8.708742 | CATCGTTCATAATTAAGCCTATTTCGA | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
3651 | 4547 | 8.139350 | TCGTTCATAATTAAGCCTATTTCGAGA | 58.861 | 33.333 | 0.00 | 0.00 | 0.00 | 4.04 |
3652 | 4548 | 8.428536 | CGTTCATAATTAAGCCTATTTCGAGAG | 58.571 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
3654 | 4550 | 9.698309 | TTCATAATTAAGCCTATTTCGAGAGAG | 57.302 | 33.333 | 0.00 | 0.00 | 43.69 | 3.20 |
3655 | 4551 | 9.078990 | TCATAATTAAGCCTATTTCGAGAGAGA | 57.921 | 33.333 | 0.00 | 0.00 | 43.69 | 3.10 |
3656 | 4552 | 9.868277 | CATAATTAAGCCTATTTCGAGAGAGAT | 57.132 | 33.333 | 0.00 | 0.00 | 43.69 | 2.75 |
3659 | 4555 | 5.606348 | AAGCCTATTTCGAGAGAGATTGT | 57.394 | 39.130 | 0.00 | 0.00 | 43.69 | 2.71 |
3661 | 4557 | 4.038642 | AGCCTATTTCGAGAGAGATTGTCC | 59.961 | 45.833 | 0.00 | 0.00 | 43.69 | 4.02 |
3662 | 4558 | 4.202161 | GCCTATTTCGAGAGAGATTGTCCA | 60.202 | 45.833 | 0.00 | 0.00 | 43.69 | 4.02 |
3664 | 4560 | 6.294787 | GCCTATTTCGAGAGAGATTGTCCATA | 60.295 | 42.308 | 0.00 | 0.00 | 43.69 | 2.74 |
3666 | 4562 | 8.310382 | CCTATTTCGAGAGAGATTGTCCATATT | 58.690 | 37.037 | 0.00 | 0.00 | 43.69 | 1.28 |
3668 | 4564 | 8.970859 | ATTTCGAGAGAGATTGTCCATATTTT | 57.029 | 30.769 | 0.00 | 0.00 | 43.69 | 1.82 |
3689 | 4585 | 5.443142 | TTTTTAAAGTTGTGCGCAAACTC | 57.557 | 34.783 | 26.72 | 13.85 | 36.22 | 3.01 |
3690 | 4586 | 2.376915 | TAAAGTTGTGCGCAAACTCG | 57.623 | 45.000 | 26.72 | 0.00 | 36.22 | 4.18 |
3692 | 4588 | 0.304705 | AAGTTGTGCGCAAACTCGAG | 59.695 | 50.000 | 26.72 | 11.84 | 36.22 | 4.04 |
3693 | 4589 | 0.810031 | AGTTGTGCGCAAACTCGAGT | 60.810 | 50.000 | 23.38 | 13.58 | 36.22 | 4.18 |
3694 | 4590 | 0.383124 | GTTGTGCGCAAACTCGAGTC | 60.383 | 55.000 | 20.33 | 6.39 | 36.22 | 3.36 |
3695 | 4591 | 1.817217 | TTGTGCGCAAACTCGAGTCG | 61.817 | 55.000 | 20.33 | 18.90 | 0.00 | 4.18 |
3696 | 4592 | 2.014554 | GTGCGCAAACTCGAGTCGA | 61.015 | 57.895 | 24.25 | 15.64 | 0.00 | 4.20 |
3697 | 4593 | 2.014554 | TGCGCAAACTCGAGTCGAC | 61.015 | 57.895 | 24.25 | 7.70 | 0.00 | 4.20 |
3698 | 4594 | 2.717809 | GCGCAAACTCGAGTCGACC | 61.718 | 63.158 | 24.25 | 11.13 | 0.00 | 4.79 |
3699 | 4595 | 1.081376 | CGCAAACTCGAGTCGACCT | 60.081 | 57.895 | 20.33 | 0.00 | 0.00 | 3.85 |
3700 | 4596 | 0.167470 | CGCAAACTCGAGTCGACCTA | 59.833 | 55.000 | 20.33 | 0.00 | 0.00 | 3.08 |
3701 | 4597 | 1.615502 | GCAAACTCGAGTCGACCTAC | 58.384 | 55.000 | 20.33 | 3.40 | 0.00 | 3.18 |
3702 | 4598 | 1.731750 | GCAAACTCGAGTCGACCTACC | 60.732 | 57.143 | 20.33 | 0.00 | 0.00 | 3.18 |
3704 | 4600 | 3.005554 | CAAACTCGAGTCGACCTACCTA | 58.994 | 50.000 | 20.33 | 0.00 | 0.00 | 3.08 |
3705 | 4601 | 3.557228 | AACTCGAGTCGACCTACCTAT | 57.443 | 47.619 | 20.33 | 0.00 | 0.00 | 2.57 |
3706 | 4602 | 2.836262 | ACTCGAGTCGACCTACCTATG | 58.164 | 52.381 | 13.58 | 0.87 | 0.00 | 2.23 |
3708 | 4604 | 3.386078 | ACTCGAGTCGACCTACCTATGTA | 59.614 | 47.826 | 13.58 | 0.00 | 0.00 | 2.29 |
3709 | 4605 | 4.141846 | ACTCGAGTCGACCTACCTATGTAA | 60.142 | 45.833 | 13.58 | 0.00 | 0.00 | 2.41 |
3710 | 4606 | 4.375272 | TCGAGTCGACCTACCTATGTAAG | 58.625 | 47.826 | 12.09 | 0.00 | 0.00 | 2.34 |
3711 | 4607 | 4.125703 | CGAGTCGACCTACCTATGTAAGT | 58.874 | 47.826 | 13.01 | 0.00 | 0.00 | 2.24 |
3713 | 4609 | 5.065731 | CGAGTCGACCTACCTATGTAAGTTT | 59.934 | 44.000 | 13.01 | 0.00 | 0.00 | 2.66 |
3715 | 4611 | 7.518052 | CGAGTCGACCTACCTATGTAAGTTTAG | 60.518 | 44.444 | 13.01 | 0.00 | 0.00 | 1.85 |
3716 | 4612 | 7.115414 | AGTCGACCTACCTATGTAAGTTTAGT | 58.885 | 38.462 | 13.01 | 0.00 | 0.00 | 2.24 |
3717 | 4613 | 7.613411 | AGTCGACCTACCTATGTAAGTTTAGTT | 59.387 | 37.037 | 13.01 | 0.00 | 0.00 | 2.24 |
3718 | 4614 | 8.246871 | GTCGACCTACCTATGTAAGTTTAGTTT | 58.753 | 37.037 | 3.51 | 0.00 | 0.00 | 2.66 |
3719 | 4615 | 8.806146 | TCGACCTACCTATGTAAGTTTAGTTTT | 58.194 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3768 | 5000 | 3.920412 | GCCTCCAAAATTGTTTTAGAGCG | 59.080 | 43.478 | 5.46 | 2.07 | 37.16 | 5.03 |
3770 | 5002 | 5.335348 | GCCTCCAAAATTGTTTTAGAGCGTA | 60.335 | 40.000 | 5.46 | 0.00 | 37.16 | 4.42 |
3784 | 5016 | 9.634300 | GTTTTAGAGCGTAGTTCATAATTAAGC | 57.366 | 33.333 | 0.00 | 0.00 | 41.37 | 3.09 |
3785 | 5017 | 7.941795 | TTAGAGCGTAGTTCATAATTAAGCC | 57.058 | 36.000 | 0.00 | 0.00 | 41.37 | 4.35 |
3786 | 5018 | 6.163135 | AGAGCGTAGTTCATAATTAAGCCT | 57.837 | 37.500 | 0.00 | 0.00 | 41.37 | 4.58 |
3787 | 5019 | 7.286215 | AGAGCGTAGTTCATAATTAAGCCTA | 57.714 | 36.000 | 0.00 | 0.00 | 41.37 | 3.93 |
3788 | 5020 | 7.897864 | AGAGCGTAGTTCATAATTAAGCCTAT | 58.102 | 34.615 | 0.00 | 0.00 | 41.37 | 2.57 |
3789 | 5021 | 8.368668 | AGAGCGTAGTTCATAATTAAGCCTATT | 58.631 | 33.333 | 0.00 | 0.00 | 41.37 | 1.73 |
3790 | 5022 | 8.904099 | AGCGTAGTTCATAATTAAGCCTATTT | 57.096 | 30.769 | 0.00 | 0.00 | 30.59 | 1.40 |
3791 | 5023 | 8.989980 | AGCGTAGTTCATAATTAAGCCTATTTC | 58.010 | 33.333 | 0.00 | 0.00 | 30.59 | 2.17 |
3792 | 5024 | 7.950496 | GCGTAGTTCATAATTAAGCCTATTTCG | 59.050 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
3793 | 5025 | 9.188588 | CGTAGTTCATAATTAAGCCTATTTCGA | 57.811 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
3796 | 5028 | 9.482627 | AGTTCATAATTAAGCCTATTTCGAGAG | 57.517 | 33.333 | 0.00 | 0.00 | 0.00 | 3.20 |
3797 | 5029 | 8.713271 | GTTCATAATTAAGCCTATTTCGAGAGG | 58.287 | 37.037 | 5.88 | 5.88 | 35.78 | 3.69 |
3798 | 5030 | 7.386851 | TCATAATTAAGCCTATTTCGAGAGGG | 58.613 | 38.462 | 10.95 | 3.48 | 33.04 | 4.30 |
3799 | 5031 | 5.888982 | AATTAAGCCTATTTCGAGAGGGA | 57.111 | 39.130 | 10.95 | 0.00 | 33.04 | 4.20 |
3800 | 5032 | 6.441088 | AATTAAGCCTATTTCGAGAGGGAT | 57.559 | 37.500 | 10.95 | 0.00 | 33.04 | 3.85 |
3801 | 5033 | 5.470047 | TTAAGCCTATTTCGAGAGGGATC | 57.530 | 43.478 | 10.95 | 0.00 | 33.04 | 3.36 |
3802 | 5034 | 1.889829 | AGCCTATTTCGAGAGGGATCG | 59.110 | 52.381 | 10.95 | 0.00 | 44.07 | 3.69 |
3803 | 5035 | 1.670380 | GCCTATTTCGAGAGGGATCGC | 60.670 | 57.143 | 0.54 | 0.54 | 42.43 | 4.58 |
3804 | 5036 | 1.067495 | CCTATTTCGAGAGGGATCGCC | 60.067 | 57.143 | 6.09 | 0.00 | 42.43 | 5.54 |
3823 | 5055 | 7.979537 | GGATCGCCCATAATTCTTTTTAAAGTT | 59.020 | 33.333 | 2.44 | 0.00 | 34.68 | 2.66 |
3836 | 5068 | 2.376915 | TAAAGTTGTGCGCAAACTCG | 57.623 | 45.000 | 26.72 | 0.00 | 36.22 | 4.18 |
3838 | 5070 | 2.051345 | GTTGTGCGCAAACTCGGG | 60.051 | 61.111 | 14.00 | 0.00 | 36.22 | 5.14 |
3839 | 5071 | 2.515057 | TTGTGCGCAAACTCGGGT | 60.515 | 55.556 | 14.00 | 0.00 | 0.00 | 5.28 |
3840 | 5072 | 2.539338 | TTGTGCGCAAACTCGGGTC | 61.539 | 57.895 | 14.00 | 0.00 | 0.00 | 4.46 |
3841 | 5073 | 4.072088 | GTGCGCAAACTCGGGTCG | 62.072 | 66.667 | 14.00 | 0.00 | 0.00 | 4.79 |
3842 | 5074 | 4.287781 | TGCGCAAACTCGGGTCGA | 62.288 | 61.111 | 8.16 | 0.00 | 0.00 | 4.20 |
3843 | 5075 | 3.774702 | GCGCAAACTCGGGTCGAC | 61.775 | 66.667 | 7.13 | 7.13 | 0.00 | 4.20 |
3854 | 5086 | 2.272146 | GGTCGACCCACCATGCAT | 59.728 | 61.111 | 24.75 | 0.00 | 36.32 | 3.96 |
3855 | 5087 | 2.114670 | GGTCGACCCACCATGCATG | 61.115 | 63.158 | 24.75 | 20.19 | 36.32 | 4.06 |
3858 | 5090 | 1.127343 | TCGACCCACCATGCATGATA | 58.873 | 50.000 | 28.31 | 0.00 | 0.00 | 2.15 |
3860 | 5092 | 1.808343 | CGACCCACCATGCATGATATG | 59.192 | 52.381 | 28.31 | 20.45 | 0.00 | 1.78 |
3880 | 5112 | 3.244670 | GCATGCTTGTGCGTATTCTAG | 57.755 | 47.619 | 11.37 | 0.00 | 43.34 | 2.43 |
3883 | 5115 | 4.201812 | GCATGCTTGTGCGTATTCTAGAAA | 60.202 | 41.667 | 11.37 | 0.00 | 43.34 | 2.52 |
3884 | 5116 | 5.673568 | GCATGCTTGTGCGTATTCTAGAAAA | 60.674 | 40.000 | 11.37 | 0.00 | 43.34 | 2.29 |
3885 | 5117 | 5.277601 | TGCTTGTGCGTATTCTAGAAAAC | 57.722 | 39.130 | 9.71 | 4.30 | 43.34 | 2.43 |
3886 | 5118 | 4.752604 | TGCTTGTGCGTATTCTAGAAAACA | 59.247 | 37.500 | 9.71 | 6.72 | 43.34 | 2.83 |
3887 | 5119 | 5.237561 | TGCTTGTGCGTATTCTAGAAAACAA | 59.762 | 36.000 | 9.71 | 13.09 | 43.34 | 2.83 |
3888 | 5120 | 6.140110 | GCTTGTGCGTATTCTAGAAAACAAA | 58.860 | 36.000 | 9.71 | 0.00 | 0.00 | 2.83 |
3903 | 5135 | 6.114767 | AGAAAACAAATTGCACCAACTCAAT | 58.885 | 32.000 | 0.00 | 0.00 | 34.66 | 2.57 |
3910 | 5142 | 5.981088 | ATTGCACCAACTCAATGTTCATA | 57.019 | 34.783 | 0.00 | 0.00 | 36.63 | 2.15 |
3921 | 5153 | 7.348080 | ACTCAATGTTCATACTTCTATCCGA | 57.652 | 36.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3935 | 5167 | 5.545658 | TCTATCCGAAAGCATTGAAACAC | 57.454 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
3958 | 5190 | 7.639113 | ACTAAAAGTGAATTGAGTTGAACCA | 57.361 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3967 | 5199 | 1.879380 | TGAGTTGAACCATTTCGCCAG | 59.121 | 47.619 | 0.00 | 0.00 | 34.04 | 4.85 |
3968 | 5200 | 1.880027 | GAGTTGAACCATTTCGCCAGT | 59.120 | 47.619 | 0.00 | 0.00 | 34.04 | 4.00 |
3973 | 5205 | 1.336755 | GAACCATTTCGCCAGTGTGTT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
3975 | 5207 | 0.110238 | CCATTTCGCCAGTGTGTTCG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3976 | 5208 | 0.586319 | CATTTCGCCAGTGTGTTCGT | 59.414 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3977 | 5209 | 0.865769 | ATTTCGCCAGTGTGTTCGTC | 59.134 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3979 | 5211 | 2.981977 | TTCGCCAGTGTGTTCGTCCC | 62.982 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3981 | 5213 | 3.148084 | CCAGTGTGTTCGTCCCCT | 58.852 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
3982 | 5214 | 1.823169 | GCCAGTGTGTTCGTCCCCTA | 61.823 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3983 | 5215 | 0.902531 | CCAGTGTGTTCGTCCCCTAT | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3994 | 5227 | 0.034059 | GTCCCCTATGAGCGACATGG | 59.966 | 60.000 | 0.00 | 6.53 | 39.77 | 3.66 |
4033 | 5266 | 2.825836 | CCAGCATTGTCGGCCTCC | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4039 | 5272 | 3.943137 | ATTGTCGGCCTCCCCTCCA | 62.943 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
4048 | 5281 | 0.852842 | CCTCCCCTCCATTGCCATTA | 59.147 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4058 | 5291 | 0.532862 | ATTGCCATTAGAGGACGCCG | 60.533 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
4096 | 5329 | 4.051167 | TGATGGTGGCAGCAGGGG | 62.051 | 66.667 | 24.68 | 0.00 | 0.00 | 4.79 |
4098 | 5331 | 3.590466 | GATGGTGGCAGCAGGGGTT | 62.590 | 63.158 | 24.68 | 7.53 | 0.00 | 4.11 |
4099 | 5332 | 3.590466 | ATGGTGGCAGCAGGGGTTC | 62.590 | 63.158 | 24.68 | 0.00 | 0.00 | 3.62 |
4100 | 5333 | 3.971702 | GGTGGCAGCAGGGGTTCT | 61.972 | 66.667 | 12.58 | 0.00 | 0.00 | 3.01 |
4102 | 5335 | 3.650950 | TGGCAGCAGGGGTTCTCC | 61.651 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
4103 | 5336 | 3.334054 | GGCAGCAGGGGTTCTCCT | 61.334 | 66.667 | 0.00 | 0.00 | 37.71 | 3.69 |
4104 | 5337 | 2.270527 | GCAGCAGGGGTTCTCCTC | 59.729 | 66.667 | 0.00 | 0.00 | 34.31 | 3.71 |
4119 | 5352 | 1.153289 | CCTCCCCTCTTGCATGTCG | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
4123 | 5356 | 3.197790 | CCTCTTGCATGTCGGCGG | 61.198 | 66.667 | 7.21 | 0.00 | 36.28 | 6.13 |
4125 | 5358 | 4.776322 | TCTTGCATGTCGGCGGGG | 62.776 | 66.667 | 7.21 | 0.00 | 36.28 | 5.73 |
4147 | 5380 | 2.421739 | CGGGGGCTCGACCTAATG | 59.578 | 66.667 | 4.41 | 0.00 | 39.10 | 1.90 |
4190 | 5423 | 1.138047 | GGCGTCGTTAGATGGACACG | 61.138 | 60.000 | 0.00 | 0.00 | 34.04 | 4.49 |
4196 | 5429 | 1.531912 | GTTAGATGGACACGACGACG | 58.468 | 55.000 | 5.58 | 5.58 | 45.75 | 5.12 |
4197 | 5430 | 0.179181 | TTAGATGGACACGACGACGC | 60.179 | 55.000 | 7.30 | 0.00 | 43.96 | 5.19 |
4225 | 5458 | 4.947147 | TTGTGGAGGTGTGGGCGC | 62.947 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
4264 | 5497 | 1.169661 | TGTCCAACGGTTGATGTGGC | 61.170 | 55.000 | 21.88 | 7.41 | 0.00 | 5.01 |
4265 | 5498 | 0.889186 | GTCCAACGGTTGATGTGGCT | 60.889 | 55.000 | 21.88 | 0.00 | 0.00 | 4.75 |
4297 | 5530 | 2.109538 | CTTAGGCATGGCATCGCACG | 62.110 | 60.000 | 22.64 | 1.55 | 0.00 | 5.34 |
4304 | 5537 | 4.460683 | GGCATCGCACGGGTGGTA | 62.461 | 66.667 | 0.00 | 0.00 | 0.00 | 3.25 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 1.756538 | CAAAGGCCGGGCATTCTTTAT | 59.243 | 47.619 | 31.59 | 3.02 | 28.96 | 1.40 |
73 | 76 | 2.360844 | TGCTCGTTTGGACTTGTTGAA | 58.639 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
74 | 77 | 2.031258 | TGCTCGTTTGGACTTGTTGA | 57.969 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
145 | 148 | 5.047235 | GTGTAATCCCCGTATAAGATCTGCT | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 4.24 |
153 | 156 | 1.344114 | GGCGGTGTAATCCCCGTATAA | 59.656 | 52.381 | 0.00 | 0.00 | 45.91 | 0.98 |
244 | 247 | 1.561643 | TCCTGCAGAAGTCGAAGGAT | 58.438 | 50.000 | 17.39 | 0.00 | 32.07 | 3.24 |
249 | 252 | 3.555966 | TGATCTATCCTGCAGAAGTCGA | 58.444 | 45.455 | 17.39 | 3.29 | 0.00 | 4.20 |
268 | 271 | 1.141019 | GCGATGGCTCCGTACTTGA | 59.859 | 57.895 | 0.00 | 0.00 | 35.83 | 3.02 |
369 | 375 | 0.701731 | TGGGGGTGGTTGTCTTATGG | 59.298 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
383 | 389 | 9.594478 | GTTTTCTGTACATTATTTTTATGGGGG | 57.406 | 33.333 | 0.00 | 0.00 | 0.00 | 5.40 |
409 | 415 | 3.364964 | GGTTGCGGAGTATTGACAAACAG | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
415 | 421 | 3.758300 | CAATTGGTTGCGGAGTATTGAC | 58.242 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
457 | 467 | 9.670442 | AGTAGTTTCAAATCTATACCCTCCATA | 57.330 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
533 | 551 | 8.523915 | TTGCCAACATGATGAGTCTATTAAAT | 57.476 | 30.769 | 4.25 | 0.00 | 0.00 | 1.40 |
563 | 581 | 3.713288 | GTTATACGCAGTCAGGCATGTA | 58.287 | 45.455 | 0.00 | 0.00 | 43.93 | 2.29 |
586 | 604 | 3.134804 | AGGGGAGATTCGTTATGAACCTG | 59.865 | 47.826 | 0.00 | 0.00 | 40.00 | 4.00 |
598 | 616 | 1.228510 | CCTTGGCCAGGGGAGATTC | 59.771 | 63.158 | 26.18 | 0.00 | 39.39 | 2.52 |
623 | 641 | 4.398044 | CGTAATGCTTGGAAGTTTGGGTAT | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
701 | 720 | 4.082190 | TGGTACATGACTTCAGCAGAGTAC | 60.082 | 45.833 | 0.00 | 0.00 | 33.54 | 2.73 |
702 | 721 | 4.086457 | TGGTACATGACTTCAGCAGAGTA | 58.914 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
703 | 722 | 2.899900 | TGGTACATGACTTCAGCAGAGT | 59.100 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
740 | 761 | 4.021016 | TGTTCAGAAGAGAAGGAAGTAGCC | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 3.93 |
741 | 762 | 5.140747 | TGTTCAGAAGAGAAGGAAGTAGC | 57.859 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
744 | 765 | 5.622346 | AGTTGTTCAGAAGAGAAGGAAGT | 57.378 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
746 | 767 | 7.565680 | AGTTTAGTTGTTCAGAAGAGAAGGAA | 58.434 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
748 | 769 | 6.986817 | TGAGTTTAGTTGTTCAGAAGAGAAGG | 59.013 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
750 | 771 | 7.556844 | ACTGAGTTTAGTTGTTCAGAAGAGAA | 58.443 | 34.615 | 7.29 | 0.00 | 39.46 | 2.87 |
751 | 772 | 7.113658 | ACTGAGTTTAGTTGTTCAGAAGAGA | 57.886 | 36.000 | 7.29 | 0.00 | 39.46 | 3.10 |
752 | 773 | 8.353684 | TCTACTGAGTTTAGTTGTTCAGAAGAG | 58.646 | 37.037 | 7.29 | 2.59 | 39.46 | 2.85 |
753 | 774 | 8.234136 | TCTACTGAGTTTAGTTGTTCAGAAGA | 57.766 | 34.615 | 7.29 | 0.00 | 39.46 | 2.87 |
754 | 775 | 9.134734 | GATCTACTGAGTTTAGTTGTTCAGAAG | 57.865 | 37.037 | 7.29 | 0.00 | 39.46 | 2.85 |
755 | 776 | 7.808381 | CGATCTACTGAGTTTAGTTGTTCAGAA | 59.192 | 37.037 | 7.29 | 0.00 | 39.46 | 3.02 |
799 | 820 | 0.528470 | CACGGTTGGTGTGTTTGGTT | 59.472 | 50.000 | 0.00 | 0.00 | 41.89 | 3.67 |
800 | 821 | 2.185238 | CACGGTTGGTGTGTTTGGT | 58.815 | 52.632 | 0.00 | 0.00 | 41.89 | 3.67 |
1866 | 1894 | 1.412606 | GCGTTCGAAGTCGCTGAAG | 59.587 | 57.895 | 21.62 | 0.00 | 44.32 | 3.02 |
2097 | 2125 | 4.760047 | GCGTGGTGGATGCCGAGT | 62.760 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
2289 | 2317 | 1.891919 | GCAGTTGTGGAAGACGGCA | 60.892 | 57.895 | 0.00 | 0.00 | 37.03 | 5.69 |
2546 | 2574 | 1.452108 | GGGCAGTGGTAGTGCATCC | 60.452 | 63.158 | 10.44 | 0.00 | 46.06 | 3.51 |
2814 | 2842 | 1.490693 | CGTAGATGATGTGCACGGCC | 61.491 | 60.000 | 13.13 | 4.16 | 0.00 | 6.13 |
3168 | 3196 | 2.647297 | GCAAGGCACAAGCAGACC | 59.353 | 61.111 | 0.00 | 0.00 | 44.61 | 3.85 |
3333 | 3361 | 1.971695 | CCAAGTTCCGAACAGGGCC | 60.972 | 63.158 | 13.69 | 0.00 | 41.52 | 5.80 |
3334 | 3362 | 2.626780 | GCCAAGTTCCGAACAGGGC | 61.627 | 63.158 | 22.65 | 22.65 | 42.71 | 5.19 |
3336 | 3364 | 3.668386 | GGCCAAGTTCCGAACAGG | 58.332 | 61.111 | 13.69 | 14.46 | 42.97 | 4.00 |
3355 | 3383 | 4.148825 | CTCCCCAACTCCGCGGAG | 62.149 | 72.222 | 45.26 | 45.26 | 46.91 | 4.63 |
3359 | 3387 | 4.785453 | CCAGCTCCCCAACTCCGC | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
3360 | 3388 | 4.785453 | GCCAGCTCCCCAACTCCG | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
3361 | 3389 | 2.432174 | AAAGCCAGCTCCCCAACTCC | 62.432 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3362 | 3390 | 0.540597 | AAAAGCCAGCTCCCCAACTC | 60.541 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3363 | 3391 | 0.777446 | TAAAAGCCAGCTCCCCAACT | 59.223 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3364 | 3392 | 1.177401 | CTAAAAGCCAGCTCCCCAAC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3365 | 3393 | 0.611896 | GCTAAAAGCCAGCTCCCCAA | 60.612 | 55.000 | 0.00 | 0.00 | 34.48 | 4.12 |
3366 | 3394 | 1.000896 | GCTAAAAGCCAGCTCCCCA | 60.001 | 57.895 | 0.00 | 0.00 | 34.48 | 4.96 |
3367 | 3395 | 1.000896 | TGCTAAAAGCCAGCTCCCC | 60.001 | 57.895 | 0.00 | 0.00 | 41.51 | 4.81 |
3368 | 3396 | 1.661498 | GCTGCTAAAAGCCAGCTCCC | 61.661 | 60.000 | 12.85 | 0.00 | 41.51 | 4.30 |
3369 | 3397 | 0.679321 | AGCTGCTAAAAGCCAGCTCC | 60.679 | 55.000 | 15.45 | 0.00 | 45.59 | 4.70 |
3370 | 3398 | 1.132073 | GAAGCTGCTAAAAGCCAGCTC | 59.868 | 52.381 | 19.11 | 12.44 | 46.85 | 4.09 |
3372 | 3400 | 0.883833 | TGAAGCTGCTAAAAGCCAGC | 59.116 | 50.000 | 0.90 | 12.45 | 44.68 | 4.85 |
3373 | 3401 | 2.751259 | TGATGAAGCTGCTAAAAGCCAG | 59.249 | 45.455 | 0.90 | 0.00 | 44.68 | 4.85 |
3374 | 3402 | 2.794103 | TGATGAAGCTGCTAAAAGCCA | 58.206 | 42.857 | 0.90 | 0.00 | 44.68 | 4.75 |
3375 | 3403 | 3.855689 | TTGATGAAGCTGCTAAAAGCC | 57.144 | 42.857 | 0.90 | 0.00 | 44.68 | 4.35 |
3376 | 3404 | 7.463780 | GCTTAATTTGATGAAGCTGCTAAAAGC | 60.464 | 37.037 | 0.90 | 2.25 | 41.89 | 3.51 |
3377 | 3405 | 7.892803 | GCTTAATTTGATGAAGCTGCTAAAAG | 58.107 | 34.615 | 0.90 | 0.00 | 41.89 | 2.27 |
3378 | 3406 | 7.816945 | GCTTAATTTGATGAAGCTGCTAAAA | 57.183 | 32.000 | 0.90 | 0.00 | 41.89 | 1.52 |
3386 | 3414 | 9.070149 | CAAGACTTTAGCTTAATTTGATGAAGC | 57.930 | 33.333 | 0.00 | 2.38 | 44.79 | 3.86 |
3389 | 3417 | 8.730680 | GGACAAGACTTTAGCTTAATTTGATGA | 58.269 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
3390 | 3418 | 8.514594 | TGGACAAGACTTTAGCTTAATTTGATG | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
3391 | 3419 | 8.515414 | GTGGACAAGACTTTAGCTTAATTTGAT | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3392 | 3420 | 7.719633 | AGTGGACAAGACTTTAGCTTAATTTGA | 59.280 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3393 | 3421 | 7.875971 | AGTGGACAAGACTTTAGCTTAATTTG | 58.124 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
3394 | 3422 | 7.175119 | GGAGTGGACAAGACTTTAGCTTAATTT | 59.825 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
3395 | 3423 | 6.655425 | GGAGTGGACAAGACTTTAGCTTAATT | 59.345 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3396 | 3424 | 6.174049 | GGAGTGGACAAGACTTTAGCTTAAT | 58.826 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3397 | 3425 | 5.512576 | GGGAGTGGACAAGACTTTAGCTTAA | 60.513 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3398 | 3426 | 4.020485 | GGGAGTGGACAAGACTTTAGCTTA | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.09 |
3399 | 3427 | 3.244596 | GGGAGTGGACAAGACTTTAGCTT | 60.245 | 47.826 | 0.00 | 0.00 | 0.00 | 3.74 |
3400 | 3428 | 2.303311 | GGGAGTGGACAAGACTTTAGCT | 59.697 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3401 | 3429 | 2.701107 | GGGAGTGGACAAGACTTTAGC | 58.299 | 52.381 | 0.00 | 0.00 | 0.00 | 3.09 |
3402 | 3430 | 2.353803 | CCGGGAGTGGACAAGACTTTAG | 60.354 | 54.545 | 0.00 | 0.00 | 0.00 | 1.85 |
3403 | 3431 | 1.621814 | CCGGGAGTGGACAAGACTTTA | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
3404 | 3432 | 0.396811 | CCGGGAGTGGACAAGACTTT | 59.603 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3405 | 3433 | 0.471211 | TCCGGGAGTGGACAAGACTT | 60.471 | 55.000 | 0.00 | 0.00 | 31.53 | 3.01 |
3406 | 3434 | 0.900647 | CTCCGGGAGTGGACAAGACT | 60.901 | 60.000 | 16.15 | 0.00 | 33.48 | 3.24 |
3407 | 3435 | 1.186267 | ACTCCGGGAGTGGACAAGAC | 61.186 | 60.000 | 28.27 | 0.00 | 41.76 | 3.01 |
3408 | 3436 | 1.155390 | ACTCCGGGAGTGGACAAGA | 59.845 | 57.895 | 28.27 | 0.00 | 41.76 | 3.02 |
3409 | 3437 | 3.793060 | ACTCCGGGAGTGGACAAG | 58.207 | 61.111 | 28.27 | 1.25 | 41.76 | 3.16 |
3418 | 3446 | 2.314071 | TCTTTAACTCCACTCCGGGA | 57.686 | 50.000 | 0.00 | 0.00 | 34.36 | 5.14 |
3419 | 3447 | 2.302157 | ACTTCTTTAACTCCACTCCGGG | 59.698 | 50.000 | 0.00 | 0.00 | 34.36 | 5.73 |
3420 | 3448 | 3.679824 | ACTTCTTTAACTCCACTCCGG | 57.320 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
3421 | 3449 | 5.415077 | TCTCTACTTCTTTAACTCCACTCCG | 59.585 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3422 | 3450 | 6.660094 | TCTCTCTACTTCTTTAACTCCACTCC | 59.340 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
3423 | 3451 | 7.690952 | TCTCTCTACTTCTTTAACTCCACTC | 57.309 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3424 | 3452 | 8.361889 | GTTTCTCTCTACTTCTTTAACTCCACT | 58.638 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
3425 | 3453 | 7.599621 | GGTTTCTCTCTACTTCTTTAACTCCAC | 59.400 | 40.741 | 0.00 | 0.00 | 0.00 | 4.02 |
3426 | 3454 | 7.523380 | CGGTTTCTCTCTACTTCTTTAACTCCA | 60.523 | 40.741 | 0.00 | 0.00 | 0.00 | 3.86 |
3427 | 3455 | 6.807720 | CGGTTTCTCTCTACTTCTTTAACTCC | 59.192 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
3428 | 3456 | 7.592051 | TCGGTTTCTCTCTACTTCTTTAACTC | 58.408 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3429 | 3457 | 7.521871 | TCGGTTTCTCTCTACTTCTTTAACT | 57.478 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3430 | 3458 | 7.650903 | TGTTCGGTTTCTCTCTACTTCTTTAAC | 59.349 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
3431 | 3459 | 7.650903 | GTGTTCGGTTTCTCTCTACTTCTTTAA | 59.349 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
3432 | 3460 | 7.144000 | GTGTTCGGTTTCTCTCTACTTCTTTA | 58.856 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
3433 | 3461 | 5.984323 | GTGTTCGGTTTCTCTCTACTTCTTT | 59.016 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3434 | 3462 | 5.068723 | TGTGTTCGGTTTCTCTCTACTTCTT | 59.931 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3435 | 3463 | 4.583489 | TGTGTTCGGTTTCTCTCTACTTCT | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
3436 | 3464 | 4.868067 | TGTGTTCGGTTTCTCTCTACTTC | 58.132 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
3437 | 3465 | 4.796618 | GCTGTGTTCGGTTTCTCTCTACTT | 60.797 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
3438 | 3466 | 3.305471 | GCTGTGTTCGGTTTCTCTCTACT | 60.305 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3439 | 3467 | 2.987821 | GCTGTGTTCGGTTTCTCTCTAC | 59.012 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3440 | 3468 | 2.029290 | GGCTGTGTTCGGTTTCTCTCTA | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3441 | 3469 | 1.270358 | GGCTGTGTTCGGTTTCTCTCT | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
3442 | 3470 | 1.149148 | GGCTGTGTTCGGTTTCTCTC | 58.851 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
3443 | 3471 | 0.759346 | AGGCTGTGTTCGGTTTCTCT | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3444 | 3472 | 1.594331 | AAGGCTGTGTTCGGTTTCTC | 58.406 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3445 | 3473 | 2.922740 | TAAGGCTGTGTTCGGTTTCT | 57.077 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3446 | 3474 | 3.500680 | TGATTAAGGCTGTGTTCGGTTTC | 59.499 | 43.478 | 0.00 | 0.00 | 0.00 | 2.78 |
3447 | 3475 | 3.482436 | TGATTAAGGCTGTGTTCGGTTT | 58.518 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
3448 | 3476 | 3.074412 | CTGATTAAGGCTGTGTTCGGTT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
3449 | 3477 | 2.301870 | TCTGATTAAGGCTGTGTTCGGT | 59.698 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3450 | 3478 | 2.932614 | CTCTGATTAAGGCTGTGTTCGG | 59.067 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3451 | 3479 | 2.349886 | GCTCTGATTAAGGCTGTGTTCG | 59.650 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3452 | 3480 | 3.126000 | GTGCTCTGATTAAGGCTGTGTTC | 59.874 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
3453 | 3481 | 3.077359 | GTGCTCTGATTAAGGCTGTGTT | 58.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
3454 | 3482 | 2.038952 | TGTGCTCTGATTAAGGCTGTGT | 59.961 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
3455 | 3483 | 2.703416 | TGTGCTCTGATTAAGGCTGTG | 58.297 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
3456 | 3484 | 3.641434 | ATGTGCTCTGATTAAGGCTGT | 57.359 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
3457 | 3485 | 4.978083 | AAATGTGCTCTGATTAAGGCTG | 57.022 | 40.909 | 0.00 | 0.00 | 0.00 | 4.85 |
3458 | 3486 | 4.159135 | CCAAAATGTGCTCTGATTAAGGCT | 59.841 | 41.667 | 0.00 | 0.00 | 0.00 | 4.58 |
3459 | 3487 | 4.082026 | ACCAAAATGTGCTCTGATTAAGGC | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
3460 | 3488 | 5.649782 | ACCAAAATGTGCTCTGATTAAGG | 57.350 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
3461 | 3489 | 6.128742 | GCAAACCAAAATGTGCTCTGATTAAG | 60.129 | 38.462 | 0.00 | 0.00 | 34.13 | 1.85 |
3462 | 3490 | 5.695816 | GCAAACCAAAATGTGCTCTGATTAA | 59.304 | 36.000 | 0.00 | 0.00 | 34.13 | 1.40 |
3463 | 3491 | 5.010922 | AGCAAACCAAAATGTGCTCTGATTA | 59.989 | 36.000 | 0.00 | 0.00 | 43.76 | 1.75 |
3464 | 3492 | 4.060205 | GCAAACCAAAATGTGCTCTGATT | 58.940 | 39.130 | 0.00 | 0.00 | 34.13 | 2.57 |
3465 | 3493 | 3.322828 | AGCAAACCAAAATGTGCTCTGAT | 59.677 | 39.130 | 0.00 | 0.00 | 43.76 | 2.90 |
3466 | 3494 | 2.694628 | AGCAAACCAAAATGTGCTCTGA | 59.305 | 40.909 | 0.00 | 0.00 | 43.76 | 3.27 |
3467 | 3495 | 3.102052 | AGCAAACCAAAATGTGCTCTG | 57.898 | 42.857 | 0.00 | 0.00 | 43.76 | 3.35 |
3486 | 3514 | 3.093057 | AGTAACAGCAGTACAGGAGGAG | 58.907 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3488 | 3516 | 3.963428 | AAGTAACAGCAGTACAGGAGG | 57.037 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3491 | 3519 | 6.017109 | ACATCAAAAAGTAACAGCAGTACAGG | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
3531 | 3559 | 8.591940 | GGAGTAATAATAACGGAAGGGAATACT | 58.408 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
3532 | 3560 | 8.591940 | AGGAGTAATAATAACGGAAGGGAATAC | 58.408 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
3557 | 3585 | 4.038642 | GCTCCCAGAAGTCTTATAGACCAG | 59.961 | 50.000 | 3.33 | 0.00 | 46.18 | 4.00 |
3561 | 3589 | 3.639094 | GCTGCTCCCAGAAGTCTTATAGA | 59.361 | 47.826 | 0.00 | 0.00 | 41.77 | 1.98 |
3562 | 3590 | 3.244044 | GGCTGCTCCCAGAAGTCTTATAG | 60.244 | 52.174 | 0.00 | 0.00 | 41.77 | 1.31 |
3564 | 3592 | 1.488393 | GGCTGCTCCCAGAAGTCTTAT | 59.512 | 52.381 | 0.00 | 0.00 | 41.77 | 1.73 |
3593 | 4489 | 7.462571 | AAACAATTTTGGAGGGTGTAGATAC | 57.537 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3614 | 4510 | 9.159470 | GCTTAATTATGAACGATGCTCTAAAAC | 57.841 | 33.333 | 2.66 | 0.00 | 0.00 | 2.43 |
3623 | 4519 | 8.708742 | TCGAAATAGGCTTAATTATGAACGATG | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 3.84 |
3632 | 4528 | 9.698309 | CAATCTCTCTCGAAATAGGCTTAATTA | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3633 | 4529 | 8.207545 | ACAATCTCTCTCGAAATAGGCTTAATT | 58.792 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3634 | 4530 | 7.731054 | ACAATCTCTCTCGAAATAGGCTTAAT | 58.269 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3636 | 4532 | 6.239064 | GGACAATCTCTCTCGAAATAGGCTTA | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 3.09 |
3637 | 4533 | 5.452636 | GGACAATCTCTCTCGAAATAGGCTT | 60.453 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3638 | 4534 | 4.038642 | GGACAATCTCTCTCGAAATAGGCT | 59.961 | 45.833 | 0.00 | 0.00 | 0.00 | 4.58 |
3639 | 4535 | 4.202161 | TGGACAATCTCTCTCGAAATAGGC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.93 |
3640 | 4536 | 5.521906 | TGGACAATCTCTCTCGAAATAGG | 57.478 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3641 | 4537 | 9.703892 | AAATATGGACAATCTCTCTCGAAATAG | 57.296 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
3643 | 4539 | 8.970859 | AAAATATGGACAATCTCTCTCGAAAT | 57.029 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
3644 | 4540 | 8.792830 | AAAAATATGGACAATCTCTCTCGAAA | 57.207 | 30.769 | 0.00 | 0.00 | 0.00 | 3.46 |
3668 | 4564 | 3.544285 | CGAGTTTGCGCACAACTTTAAAA | 59.456 | 39.130 | 27.04 | 9.66 | 34.87 | 1.52 |
3672 | 4568 | 0.730265 | TCGAGTTTGCGCACAACTTT | 59.270 | 45.000 | 27.04 | 14.35 | 34.87 | 2.66 |
3674 | 4570 | 0.810031 | ACTCGAGTTTGCGCACAACT | 60.810 | 50.000 | 26.83 | 26.83 | 34.87 | 3.16 |
3676 | 4572 | 1.817217 | CGACTCGAGTTTGCGCACAA | 61.817 | 55.000 | 21.08 | 5.11 | 0.00 | 3.33 |
3677 | 4573 | 2.300066 | CGACTCGAGTTTGCGCACA | 61.300 | 57.895 | 21.08 | 0.00 | 0.00 | 4.57 |
3678 | 4574 | 2.014554 | TCGACTCGAGTTTGCGCAC | 61.015 | 57.895 | 21.08 | 0.00 | 0.00 | 5.34 |
3679 | 4575 | 2.014554 | GTCGACTCGAGTTTGCGCA | 61.015 | 57.895 | 21.08 | 5.66 | 36.23 | 6.09 |
3680 | 4576 | 2.717809 | GGTCGACTCGAGTTTGCGC | 61.718 | 63.158 | 21.08 | 13.71 | 36.23 | 6.09 |
3681 | 4577 | 0.167470 | TAGGTCGACTCGAGTTTGCG | 59.833 | 55.000 | 21.08 | 18.45 | 36.23 | 4.85 |
3682 | 4578 | 1.615502 | GTAGGTCGACTCGAGTTTGC | 58.384 | 55.000 | 21.08 | 12.05 | 36.23 | 3.68 |
3683 | 4579 | 1.811359 | AGGTAGGTCGACTCGAGTTTG | 59.189 | 52.381 | 21.08 | 15.47 | 36.23 | 2.93 |
3685 | 4581 | 3.204526 | CATAGGTAGGTCGACTCGAGTT | 58.795 | 50.000 | 21.08 | 5.66 | 36.23 | 3.01 |
3686 | 4582 | 2.170187 | ACATAGGTAGGTCGACTCGAGT | 59.830 | 50.000 | 20.18 | 20.18 | 36.23 | 4.18 |
3687 | 4583 | 2.836262 | ACATAGGTAGGTCGACTCGAG | 58.164 | 52.381 | 16.46 | 11.84 | 36.23 | 4.04 |
3689 | 4585 | 4.125703 | ACTTACATAGGTAGGTCGACTCG | 58.874 | 47.826 | 16.46 | 0.00 | 35.09 | 4.18 |
3690 | 4586 | 6.448207 | AAACTTACATAGGTAGGTCGACTC | 57.552 | 41.667 | 16.46 | 5.70 | 38.70 | 3.36 |
3692 | 4588 | 7.326968 | ACTAAACTTACATAGGTAGGTCGAC | 57.673 | 40.000 | 7.13 | 7.13 | 38.70 | 4.20 |
3693 | 4589 | 7.944729 | AACTAAACTTACATAGGTAGGTCGA | 57.055 | 36.000 | 2.61 | 0.00 | 38.70 | 4.20 |
3694 | 4590 | 8.992835 | AAAACTAAACTTACATAGGTAGGTCG | 57.007 | 34.615 | 2.61 | 0.00 | 38.70 | 4.79 |
3719 | 4615 | 9.393249 | CGTATGTGCAAATTAAAGAAGAAGAAA | 57.607 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
3723 | 4619 | 6.090129 | GCCGTATGTGCAAATTAAAGAAGAA | 58.910 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3724 | 4620 | 5.392595 | GGCCGTATGTGCAAATTAAAGAAGA | 60.393 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3725 | 4621 | 4.798387 | GGCCGTATGTGCAAATTAAAGAAG | 59.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
3726 | 4622 | 4.461081 | AGGCCGTATGTGCAAATTAAAGAA | 59.539 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
3727 | 4623 | 4.013728 | AGGCCGTATGTGCAAATTAAAGA | 58.986 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
3730 | 4626 | 2.685897 | GGAGGCCGTATGTGCAAATTAA | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3731 | 4627 | 2.294074 | GGAGGCCGTATGTGCAAATTA | 58.706 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
3732 | 4628 | 1.102978 | GGAGGCCGTATGTGCAAATT | 58.897 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3734 | 4630 | 0.250945 | TTGGAGGCCGTATGTGCAAA | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3737 | 4633 | 1.102978 | ATTTTGGAGGCCGTATGTGC | 58.897 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3740 | 4636 | 3.866883 | AACAATTTTGGAGGCCGTATG | 57.133 | 42.857 | 0.00 | 0.00 | 0.00 | 2.39 |
3770 | 5002 | 9.482627 | CTCTCGAAATAGGCTTAATTATGAACT | 57.517 | 33.333 | 0.00 | 2.82 | 0.00 | 3.01 |
3778 | 5010 | 5.336849 | CGATCCCTCTCGAAATAGGCTTAAT | 60.337 | 44.000 | 0.00 | 0.00 | 41.12 | 1.40 |
3781 | 5013 | 2.297597 | CGATCCCTCTCGAAATAGGCTT | 59.702 | 50.000 | 0.00 | 0.00 | 41.12 | 4.35 |
3782 | 5014 | 1.889829 | CGATCCCTCTCGAAATAGGCT | 59.110 | 52.381 | 0.00 | 0.00 | 41.12 | 4.58 |
3783 | 5015 | 1.670380 | GCGATCCCTCTCGAAATAGGC | 60.670 | 57.143 | 3.17 | 0.00 | 41.12 | 3.93 |
3784 | 5016 | 1.067495 | GGCGATCCCTCTCGAAATAGG | 60.067 | 57.143 | 0.00 | 1.91 | 41.12 | 2.57 |
3785 | 5017 | 2.355717 | GGCGATCCCTCTCGAAATAG | 57.644 | 55.000 | 0.00 | 0.00 | 41.12 | 1.73 |
3795 | 5027 | 7.201911 | CTTTAAAAAGAATTATGGGCGATCCCT | 60.202 | 37.037 | 1.69 | 0.00 | 44.68 | 4.20 |
3796 | 5028 | 6.923508 | CTTTAAAAAGAATTATGGGCGATCCC | 59.076 | 38.462 | 0.00 | 0.00 | 44.66 | 3.85 |
3797 | 5029 | 7.489160 | ACTTTAAAAAGAATTATGGGCGATCC | 58.511 | 34.615 | 9.37 | 0.00 | 39.31 | 3.36 |
3798 | 5030 | 8.807581 | CAACTTTAAAAAGAATTATGGGCGATC | 58.192 | 33.333 | 9.37 | 0.00 | 39.31 | 3.69 |
3799 | 5031 | 8.311109 | ACAACTTTAAAAAGAATTATGGGCGAT | 58.689 | 29.630 | 9.37 | 0.00 | 39.31 | 4.58 |
3800 | 5032 | 7.596995 | CACAACTTTAAAAAGAATTATGGGCGA | 59.403 | 33.333 | 9.37 | 0.00 | 39.31 | 5.54 |
3801 | 5033 | 7.621219 | GCACAACTTTAAAAAGAATTATGGGCG | 60.621 | 37.037 | 9.37 | 0.00 | 39.31 | 6.13 |
3802 | 5034 | 7.518161 | GCACAACTTTAAAAAGAATTATGGGC | 58.482 | 34.615 | 9.37 | 8.33 | 39.31 | 5.36 |
3803 | 5035 | 7.621219 | GCGCACAACTTTAAAAAGAATTATGGG | 60.621 | 37.037 | 0.30 | 3.82 | 39.31 | 4.00 |
3804 | 5036 | 7.095857 | TGCGCACAACTTTAAAAAGAATTATGG | 60.096 | 33.333 | 5.66 | 0.00 | 39.31 | 2.74 |
3805 | 5037 | 7.782242 | TGCGCACAACTTTAAAAAGAATTATG | 58.218 | 30.769 | 5.66 | 0.00 | 39.31 | 1.90 |
3806 | 5038 | 7.938563 | TGCGCACAACTTTAAAAAGAATTAT | 57.061 | 28.000 | 5.66 | 0.00 | 39.31 | 1.28 |
3807 | 5039 | 7.757097 | TTGCGCACAACTTTAAAAAGAATTA | 57.243 | 28.000 | 11.12 | 0.00 | 39.31 | 1.40 |
3808 | 5040 | 6.654793 | TTGCGCACAACTTTAAAAAGAATT | 57.345 | 29.167 | 11.12 | 0.00 | 39.31 | 2.17 |
3809 | 5041 | 6.312672 | AGTTTGCGCACAACTTTAAAAAGAAT | 59.687 | 30.769 | 23.38 | 6.11 | 39.31 | 2.40 |
3810 | 5042 | 5.635700 | AGTTTGCGCACAACTTTAAAAAGAA | 59.364 | 32.000 | 23.38 | 5.02 | 39.31 | 2.52 |
3811 | 5043 | 5.164954 | AGTTTGCGCACAACTTTAAAAAGA | 58.835 | 33.333 | 23.38 | 0.00 | 39.31 | 2.52 |
3812 | 5044 | 5.448926 | AGTTTGCGCACAACTTTAAAAAG | 57.551 | 34.783 | 23.38 | 0.90 | 41.73 | 2.27 |
3819 | 5051 | 1.355210 | CCGAGTTTGCGCACAACTT | 59.645 | 52.632 | 27.04 | 16.86 | 34.87 | 2.66 |
3823 | 5055 | 2.970324 | GACCCGAGTTTGCGCACA | 60.970 | 61.111 | 11.12 | 0.00 | 0.00 | 4.57 |
3838 | 5070 | 0.464373 | ATCATGCATGGTGGGTCGAC | 60.464 | 55.000 | 25.97 | 7.13 | 0.00 | 4.20 |
3839 | 5071 | 1.127343 | TATCATGCATGGTGGGTCGA | 58.873 | 50.000 | 25.97 | 4.85 | 0.00 | 4.20 |
3840 | 5072 | 1.808343 | CATATCATGCATGGTGGGTCG | 59.192 | 52.381 | 25.97 | 4.39 | 0.00 | 4.79 |
3853 | 5085 | 1.951602 | ACGCACAAGCATGCATATCAT | 59.048 | 42.857 | 21.98 | 0.00 | 46.47 | 2.45 |
3854 | 5086 | 1.381522 | ACGCACAAGCATGCATATCA | 58.618 | 45.000 | 21.98 | 0.00 | 46.47 | 2.15 |
3855 | 5087 | 3.818961 | ATACGCACAAGCATGCATATC | 57.181 | 42.857 | 21.98 | 3.73 | 46.47 | 1.63 |
3858 | 5090 | 2.019249 | AGAATACGCACAAGCATGCAT | 58.981 | 42.857 | 21.98 | 4.57 | 46.47 | 3.96 |
3860 | 5092 | 2.866156 | TCTAGAATACGCACAAGCATGC | 59.134 | 45.455 | 10.51 | 10.51 | 42.27 | 4.06 |
3861 | 5093 | 5.469373 | TTTCTAGAATACGCACAAGCATG | 57.531 | 39.130 | 5.89 | 0.00 | 42.27 | 4.06 |
3862 | 5094 | 5.411361 | TGTTTTCTAGAATACGCACAAGCAT | 59.589 | 36.000 | 17.68 | 0.00 | 42.27 | 3.79 |
3864 | 5096 | 5.277601 | TGTTTTCTAGAATACGCACAAGC | 57.722 | 39.130 | 17.68 | 0.29 | 37.42 | 4.01 |
3865 | 5097 | 8.629986 | CAATTTGTTTTCTAGAATACGCACAAG | 58.370 | 33.333 | 17.68 | 5.97 | 0.00 | 3.16 |
3866 | 5098 | 7.114247 | GCAATTTGTTTTCTAGAATACGCACAA | 59.886 | 33.333 | 17.68 | 13.05 | 0.00 | 3.33 |
3868 | 5100 | 6.580791 | TGCAATTTGTTTTCTAGAATACGCAC | 59.419 | 34.615 | 17.68 | 6.86 | 0.00 | 5.34 |
3870 | 5102 | 6.033513 | GGTGCAATTTGTTTTCTAGAATACGC | 59.966 | 38.462 | 17.68 | 14.92 | 0.00 | 4.42 |
3871 | 5103 | 7.081349 | TGGTGCAATTTGTTTTCTAGAATACG | 58.919 | 34.615 | 17.68 | 7.31 | 0.00 | 3.06 |
3872 | 5104 | 8.699749 | GTTGGTGCAATTTGTTTTCTAGAATAC | 58.300 | 33.333 | 16.51 | 16.51 | 0.00 | 1.89 |
3874 | 5106 | 7.500141 | AGTTGGTGCAATTTGTTTTCTAGAAT | 58.500 | 30.769 | 5.89 | 0.00 | 0.00 | 2.40 |
3879 | 5111 | 5.083533 | TGAGTTGGTGCAATTTGTTTTCT | 57.916 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
3880 | 5112 | 5.793026 | TTGAGTTGGTGCAATTTGTTTTC | 57.207 | 34.783 | 0.00 | 0.00 | 0.00 | 2.29 |
3883 | 5115 | 4.768583 | ACATTGAGTTGGTGCAATTTGTT | 58.231 | 34.783 | 0.00 | 0.00 | 32.74 | 2.83 |
3884 | 5116 | 4.405116 | ACATTGAGTTGGTGCAATTTGT | 57.595 | 36.364 | 0.00 | 0.00 | 32.74 | 2.83 |
3885 | 5117 | 4.809958 | TGAACATTGAGTTGGTGCAATTTG | 59.190 | 37.500 | 0.00 | 0.00 | 41.51 | 2.32 |
3886 | 5118 | 5.021033 | TGAACATTGAGTTGGTGCAATTT | 57.979 | 34.783 | 0.00 | 0.00 | 41.51 | 1.82 |
3887 | 5119 | 4.669206 | TGAACATTGAGTTGGTGCAATT | 57.331 | 36.364 | 0.00 | 0.00 | 41.51 | 2.32 |
3888 | 5120 | 4.877378 | ATGAACATTGAGTTGGTGCAAT | 57.123 | 36.364 | 0.00 | 0.00 | 41.51 | 3.56 |
3903 | 5135 | 5.972935 | TGCTTTCGGATAGAAGTATGAACA | 58.027 | 37.500 | 0.00 | 0.00 | 40.40 | 3.18 |
3910 | 5142 | 5.705441 | TGTTTCAATGCTTTCGGATAGAAGT | 59.295 | 36.000 | 0.00 | 0.00 | 40.40 | 3.01 |
3921 | 5153 | 8.947055 | ATTCACTTTTAGTGTTTCAATGCTTT | 57.053 | 26.923 | 6.71 | 0.00 | 46.03 | 3.51 |
3935 | 5167 | 9.533253 | AAATGGTTCAACTCAATTCACTTTTAG | 57.467 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
3951 | 5183 | 1.336440 | CACACTGGCGAAATGGTTCAA | 59.664 | 47.619 | 0.00 | 0.00 | 32.89 | 2.69 |
3958 | 5190 | 0.865769 | GACGAACACACTGGCGAAAT | 59.134 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3967 | 5199 | 1.739371 | GCTCATAGGGGACGAACACAC | 60.739 | 57.143 | 0.00 | 0.00 | 0.00 | 3.82 |
3968 | 5200 | 0.535335 | GCTCATAGGGGACGAACACA | 59.465 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
3973 | 5205 | 3.837578 | GTCGCTCATAGGGGACGA | 58.162 | 61.111 | 0.00 | 0.00 | 38.87 | 4.20 |
3975 | 5207 | 0.034059 | CCATGTCGCTCATAGGGGAC | 59.966 | 60.000 | 0.00 | 0.00 | 45.42 | 4.46 |
3976 | 5208 | 1.121407 | CCCATGTCGCTCATAGGGGA | 61.121 | 60.000 | 8.90 | 0.00 | 40.31 | 4.81 |
3977 | 5209 | 1.372683 | CCCATGTCGCTCATAGGGG | 59.627 | 63.158 | 14.00 | 9.14 | 39.24 | 4.79 |
3979 | 5211 | 0.602106 | CTGCCCATGTCGCTCATAGG | 60.602 | 60.000 | 3.92 | 1.94 | 38.15 | 2.57 |
3981 | 5213 | 0.390492 | CTCTGCCCATGTCGCTCATA | 59.610 | 55.000 | 3.92 | 0.00 | 34.67 | 2.15 |
3982 | 5214 | 1.145598 | CTCTGCCCATGTCGCTCAT | 59.854 | 57.895 | 3.92 | 0.00 | 37.22 | 2.90 |
3983 | 5215 | 2.580815 | CTCTGCCCATGTCGCTCA | 59.419 | 61.111 | 3.92 | 0.00 | 0.00 | 4.26 |
4014 | 5247 | 2.360350 | AGGCCGACAATGCTGGTG | 60.360 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
4015 | 5248 | 2.045926 | GAGGCCGACAATGCTGGT | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
4016 | 5249 | 2.825836 | GGAGGCCGACAATGCTGG | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
4017 | 5250 | 2.825836 | GGGAGGCCGACAATGCTG | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
4019 | 5252 | 4.115199 | AGGGGAGGCCGACAATGC | 62.115 | 66.667 | 0.00 | 0.00 | 0.00 | 3.56 |
4021 | 5254 | 3.090532 | GGAGGGGAGGCCGACAAT | 61.091 | 66.667 | 0.00 | 0.00 | 0.00 | 2.71 |
4023 | 5256 | 3.943137 | AATGGAGGGGAGGCCGACA | 62.943 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
4025 | 5258 | 3.089874 | CAATGGAGGGGAGGCCGA | 61.090 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
4027 | 5260 | 4.529731 | GGCAATGGAGGGGAGGCC | 62.530 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
4033 | 5266 | 1.776667 | TCCTCTAATGGCAATGGAGGG | 59.223 | 52.381 | 28.28 | 14.16 | 42.54 | 4.30 |
4039 | 5272 | 0.532862 | CGGCGTCCTCTAATGGCAAT | 60.533 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
4080 | 5313 | 3.590466 | AACCCCTGCTGCCACCATC | 62.590 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
4085 | 5318 | 3.650950 | GGAGAACCCCTGCTGCCA | 61.651 | 66.667 | 0.00 | 0.00 | 0.00 | 4.92 |
4096 | 5329 | 0.915364 | ATGCAAGAGGGGAGGAGAAC | 59.085 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4098 | 5331 | 0.252881 | ACATGCAAGAGGGGAGGAGA | 60.253 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4099 | 5332 | 0.179936 | GACATGCAAGAGGGGAGGAG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4100 | 5333 | 1.617018 | CGACATGCAAGAGGGGAGGA | 61.617 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4102 | 5335 | 1.153289 | CCGACATGCAAGAGGGGAG | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
4103 | 5336 | 2.989639 | CCGACATGCAAGAGGGGA | 59.010 | 61.111 | 0.00 | 0.00 | 0.00 | 4.81 |
4104 | 5337 | 2.825836 | GCCGACATGCAAGAGGGG | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
4128 | 5361 | 2.432300 | ATTAGGTCGAGCCCCCGTG | 61.432 | 63.158 | 11.73 | 0.00 | 38.26 | 4.94 |
4129 | 5362 | 2.042230 | ATTAGGTCGAGCCCCCGT | 60.042 | 61.111 | 11.73 | 0.00 | 38.26 | 5.28 |
4131 | 5364 | 0.680061 | CTACATTAGGTCGAGCCCCC | 59.320 | 60.000 | 11.73 | 0.00 | 38.26 | 5.40 |
4132 | 5365 | 1.340568 | GTCTACATTAGGTCGAGCCCC | 59.659 | 57.143 | 11.73 | 0.00 | 38.26 | 5.80 |
4136 | 5369 | 4.713824 | TTGTGGTCTACATTAGGTCGAG | 57.286 | 45.455 | 0.00 | 0.00 | 39.48 | 4.04 |
4167 | 5400 | 2.514013 | CCATCTAACGACGCCACGC | 61.514 | 63.158 | 0.00 | 0.00 | 36.70 | 5.34 |
4175 | 5408 | 1.129251 | GTCGTCGTGTCCATCTAACGA | 59.871 | 52.381 | 0.00 | 0.00 | 43.50 | 3.85 |
4178 | 5411 | 0.179181 | GCGTCGTCGTGTCCATCTAA | 60.179 | 55.000 | 3.66 | 0.00 | 39.49 | 2.10 |
4180 | 5413 | 2.178521 | GCGTCGTCGTGTCCATCT | 59.821 | 61.111 | 3.66 | 0.00 | 39.49 | 2.90 |
4206 | 5439 | 2.978010 | GCCCACACCTCCACAACG | 60.978 | 66.667 | 0.00 | 0.00 | 0.00 | 4.10 |
4208 | 5441 | 4.947147 | GCGCCCACACCTCCACAA | 62.947 | 66.667 | 0.00 | 0.00 | 0.00 | 3.33 |
4234 | 5467 | 1.300697 | GTTGGACAAGACTCCGCGT | 60.301 | 57.895 | 4.92 | 0.00 | 32.22 | 6.01 |
4264 | 5497 | 1.448540 | CTAAGAGCCGCCACCACAG | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
4265 | 5498 | 2.662596 | CTAAGAGCCGCCACCACA | 59.337 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
4276 | 5509 | 0.533531 | TGCGATGCCATGCCTAAGAG | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4280 | 5513 | 2.588596 | CGTGCGATGCCATGCCTA | 60.589 | 61.111 | 0.00 | 0.00 | 0.00 | 3.93 |
4297 | 5530 | 0.252197 | GTCATCCACCACTACCACCC | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4302 | 5535 | 1.153429 | GGGCGTCATCCACCACTAC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 2.73 |
4304 | 5537 | 4.082523 | CGGGCGTCATCCACCACT | 62.083 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.