Multiple sequence alignment - TraesCS6A01G241400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G241400 chr6A 100.000 4879 0 0 1 4879 452958581 452953703 0.000000e+00 9010.0
1 TraesCS6A01G241400 chr6A 93.417 319 19 2 12 328 63051492 63051810 5.720000e-129 472.0
2 TraesCS6A01G241400 chr6A 75.875 514 108 13 4300 4802 45407266 45406758 1.050000e-61 248.0
3 TraesCS6A01G241400 chr6B 96.740 3466 88 13 723 4179 511422390 511425839 0.000000e+00 5751.0
4 TraesCS6A01G241400 chr6B 93.814 97 5 1 4207 4303 511427003 511427098 1.420000e-30 145.0
5 TraesCS6A01G241400 chr6B 100.000 30 0 0 4195 4224 511425894 511425923 6.820000e-04 56.5
6 TraesCS6A01G241400 chr6D 96.122 3533 92 16 666 4179 315650680 315647174 0.000000e+00 5723.0
7 TraesCS6A01G241400 chrUn 94.357 319 16 2 12 328 103311555 103311873 5.680000e-134 488.0
8 TraesCS6A01G241400 chrUn 94.081 321 17 2 10 328 24426003 24426323 2.040000e-133 486.0
9 TraesCS6A01G241400 chrUn 93.498 323 17 4 10 328 63181957 63181635 1.230000e-130 477.0
10 TraesCS6A01G241400 chr1D 93.730 319 18 2 12 328 17995579 17995261 1.230000e-130 477.0
11 TraesCS6A01G241400 chr1D 93.417 319 19 2 12 328 436042312 436042630 5.720000e-129 472.0
12 TraesCS6A01G241400 chr4D 93.730 319 15 5 12 327 59641352 59641668 1.590000e-129 473.0
13 TraesCS6A01G241400 chr3D 93.168 322 20 2 9 328 397532526 397532205 5.720000e-129 472.0
14 TraesCS6A01G241400 chr1A 93.417 319 19 2 12 328 454422070 454422388 5.720000e-129 472.0
15 TraesCS6A01G241400 chr1A 93.939 66 4 0 604 669 427011655 427011720 3.110000e-17 100.0
16 TraesCS6A01G241400 chr3A 95.668 277 12 0 325 601 731783302 731783578 3.460000e-121 446.0
17 TraesCS6A01G241400 chr3A 93.939 66 4 0 604 669 9038166 9038231 3.110000e-17 100.0
18 TraesCS6A01G241400 chr7D 80.969 557 100 4 4303 4855 457111026 457110472 2.090000e-118 436.0
19 TraesCS6A01G241400 chr7D 77.586 232 40 12 4302 4529 42113971 42113748 3.960000e-26 130.0
20 TraesCS6A01G241400 chr2A 94.224 277 16 0 325 601 57146632 57146908 1.620000e-114 424.0
21 TraesCS6A01G241400 chr5D 79.061 511 97 8 4298 4802 498614106 498614612 4.680000e-90 342.0
22 TraesCS6A01G241400 chr1B 75.368 475 105 11 4304 4769 665462343 665462814 8.220000e-53 219.0
23 TraesCS6A01G241400 chr5A 74.460 509 113 15 4304 4802 514201968 514202469 2.300000e-48 204.0
24 TraesCS6A01G241400 chr5A 91.026 78 6 1 604 681 547541464 547541540 2.400000e-18 104.0
25 TraesCS6A01G241400 chr5A 93.939 66 4 0 604 669 78557688 78557753 3.110000e-17 100.0
26 TraesCS6A01G241400 chr5A 93.939 66 4 0 604 669 277894114 277894049 3.110000e-17 100.0
27 TraesCS6A01G241400 chr5A 93.939 66 4 0 604 669 669395769 669395704 3.110000e-17 100.0
28 TraesCS6A01G241400 chr2D 87.919 149 18 0 4713 4861 608508726 608508578 5.020000e-40 176.0
29 TraesCS6A01G241400 chr7A 93.939 66 4 0 604 669 463000730 463000795 3.110000e-17 100.0
30 TraesCS6A01G241400 chr7A 93.939 66 4 0 604 669 490863793 490863858 3.110000e-17 100.0
31 TraesCS6A01G241400 chr7A 93.939 66 4 0 604 669 542091680 542091615 3.110000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G241400 chr6A 452953703 452958581 4878 True 9010.000000 9010 100.000000 1 4879 1 chr6A.!!$R2 4878
1 TraesCS6A01G241400 chr6A 45406758 45407266 508 True 248.000000 248 75.875000 4300 4802 1 chr6A.!!$R1 502
2 TraesCS6A01G241400 chr6B 511422390 511427098 4708 False 1984.166667 5751 96.851333 723 4303 3 chr6B.!!$F1 3580
3 TraesCS6A01G241400 chr6D 315647174 315650680 3506 True 5723.000000 5723 96.122000 666 4179 1 chr6D.!!$R1 3513
4 TraesCS6A01G241400 chr7D 457110472 457111026 554 True 436.000000 436 80.969000 4303 4855 1 chr7D.!!$R2 552
5 TraesCS6A01G241400 chr5D 498614106 498614612 506 False 342.000000 342 79.061000 4298 4802 1 chr5D.!!$F1 504
6 TraesCS6A01G241400 chr5A 514201968 514202469 501 False 204.000000 204 74.460000 4304 4802 1 chr5A.!!$F2 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 419 0.037326 TGCCTCTCCAACGCTAACTG 60.037 55.0 0.00 0.00 0.00 3.16 F
576 577 0.040058 TTCTACCCTGGCGTCTGGTA 59.960 55.0 12.29 10.13 33.55 3.25 F
910 919 0.526524 CACTCCGCCGATCAGAACTC 60.527 60.0 0.00 0.00 0.00 3.01 F
911 920 0.681564 ACTCCGCCGATCAGAACTCT 60.682 55.0 0.00 0.00 0.00 3.24 F
1934 1953 1.071605 CTTGTGAGGCTGAACTACGC 58.928 55.0 0.00 0.00 0.00 4.42 F
3367 3386 0.807496 GATGTCCAAACTGCTCTGGC 59.193 55.0 0.00 0.00 39.26 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1308 1318 0.631753 CAGTACCCTGAGGAGGAGGA 59.368 60.000 0.00 0.00 42.93 3.71 R
1934 1953 2.689983 GGTTTGCACCATCCTTGGATAG 59.310 50.000 1.37 0.00 46.92 2.08 R
2649 2668 4.671377 GCATAGGCAAATGAACATTTCGA 58.329 39.130 9.42 0.00 38.84 3.71 R
2958 2977 3.319031 ATGTGGAATCTTCCCCATTCC 57.681 47.619 6.51 4.73 41.76 3.01 R
3690 3709 1.396653 CTTGAATCCCTGACATGCCC 58.603 55.000 0.00 0.00 0.00 5.36 R
4490 5653 0.178995 TGCAGGACATCAAGCACCAA 60.179 50.000 0.00 0.00 31.05 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.043450 TTGCCGGGCATTTAGGGG 60.043 61.111 24.49 0.00 38.76 4.79
18 19 3.670629 TTGCCGGGCATTTAGGGGG 62.671 63.158 24.49 0.00 38.76 5.40
19 20 4.137615 GCCGGGCATTTAGGGGGT 62.138 66.667 15.62 0.00 0.00 4.95
20 21 2.123897 CCGGGCATTTAGGGGGTG 60.124 66.667 0.00 0.00 0.00 4.61
21 22 2.680965 CGGGCATTTAGGGGGTGT 59.319 61.111 0.00 0.00 0.00 4.16
22 23 1.000145 CGGGCATTTAGGGGGTGTT 60.000 57.895 0.00 0.00 0.00 3.32
23 24 0.613572 CGGGCATTTAGGGGGTGTTT 60.614 55.000 0.00 0.00 0.00 2.83
24 25 0.901827 GGGCATTTAGGGGGTGTTTG 59.098 55.000 0.00 0.00 0.00 2.93
25 26 1.639722 GGCATTTAGGGGGTGTTTGT 58.360 50.000 0.00 0.00 0.00 2.83
26 27 1.974957 GGCATTTAGGGGGTGTTTGTT 59.025 47.619 0.00 0.00 0.00 2.83
27 28 2.370519 GGCATTTAGGGGGTGTTTGTTT 59.629 45.455 0.00 0.00 0.00 2.83
28 29 3.181449 GGCATTTAGGGGGTGTTTGTTTT 60.181 43.478 0.00 0.00 0.00 2.43
29 30 4.062293 GCATTTAGGGGGTGTTTGTTTTC 58.938 43.478 0.00 0.00 0.00 2.29
30 31 4.443598 GCATTTAGGGGGTGTTTGTTTTCA 60.444 41.667 0.00 0.00 0.00 2.69
31 32 5.296748 CATTTAGGGGGTGTTTGTTTTCAG 58.703 41.667 0.00 0.00 0.00 3.02
32 33 1.788229 AGGGGGTGTTTGTTTTCAGG 58.212 50.000 0.00 0.00 0.00 3.86
33 34 0.756294 GGGGGTGTTTGTTTTCAGGG 59.244 55.000 0.00 0.00 0.00 4.45
34 35 1.689892 GGGGGTGTTTGTTTTCAGGGA 60.690 52.381 0.00 0.00 0.00 4.20
35 36 1.411246 GGGGTGTTTGTTTTCAGGGAC 59.589 52.381 0.00 0.00 0.00 4.46
36 37 2.384828 GGGTGTTTGTTTTCAGGGACT 58.615 47.619 0.00 0.00 43.88 3.85
37 38 2.764010 GGGTGTTTGTTTTCAGGGACTT 59.236 45.455 0.00 0.00 34.60 3.01
38 39 3.196901 GGGTGTTTGTTTTCAGGGACTTT 59.803 43.478 0.00 0.00 34.60 2.66
39 40 4.323180 GGGTGTTTGTTTTCAGGGACTTTT 60.323 41.667 0.00 0.00 34.60 2.27
40 41 5.242434 GGTGTTTGTTTTCAGGGACTTTTT 58.758 37.500 0.00 0.00 34.60 1.94
62 63 7.797038 TTTTGTGTAGGGACTAGAAAAAGTC 57.203 36.000 0.00 0.00 41.46 3.01
63 64 6.742559 TTGTGTAGGGACTAGAAAAAGTCT 57.257 37.500 0.00 0.00 44.14 3.24
64 65 6.342338 TGTGTAGGGACTAGAAAAAGTCTC 57.658 41.667 0.00 0.01 44.14 3.36
73 74 9.557061 GGGACTAGAAAAAGTCTCTTTTAAAGA 57.443 33.333 7.22 7.22 42.68 2.52
99 100 6.658188 TTTTTATCAAACGGGATGGACTTT 57.342 33.333 0.00 0.00 0.00 2.66
100 101 6.658188 TTTTATCAAACGGGATGGACTTTT 57.342 33.333 0.00 0.00 0.00 2.27
101 102 6.658188 TTTATCAAACGGGATGGACTTTTT 57.342 33.333 0.00 0.00 0.00 1.94
102 103 7.762588 TTTATCAAACGGGATGGACTTTTTA 57.237 32.000 0.00 0.00 0.00 1.52
103 104 5.897377 ATCAAACGGGATGGACTTTTTAG 57.103 39.130 0.00 0.00 0.00 1.85
104 105 4.076394 TCAAACGGGATGGACTTTTTAGG 58.924 43.478 0.00 0.00 0.00 2.69
105 106 2.801077 ACGGGATGGACTTTTTAGGG 57.199 50.000 0.00 0.00 0.00 3.53
106 107 2.271777 ACGGGATGGACTTTTTAGGGA 58.728 47.619 0.00 0.00 0.00 4.20
107 108 2.026542 ACGGGATGGACTTTTTAGGGAC 60.027 50.000 0.00 0.00 0.00 4.46
108 109 2.238898 CGGGATGGACTTTTTAGGGACT 59.761 50.000 0.00 0.00 46.37 3.85
109 110 3.453353 CGGGATGGACTTTTTAGGGACTA 59.547 47.826 0.00 0.00 41.75 2.59
123 124 4.236527 AGGGACTAAACTAGGCATTTGG 57.763 45.455 0.00 0.00 36.02 3.28
124 125 3.850173 AGGGACTAAACTAGGCATTTGGA 59.150 43.478 0.00 0.00 36.02 3.53
125 126 3.945921 GGGACTAAACTAGGCATTTGGAC 59.054 47.826 0.00 0.00 34.70 4.02
126 127 4.324331 GGGACTAAACTAGGCATTTGGACT 60.324 45.833 0.00 0.00 39.32 3.85
127 128 5.104652 GGGACTAAACTAGGCATTTGGACTA 60.105 44.000 0.00 0.00 35.43 2.59
128 129 6.412214 GGACTAAACTAGGCATTTGGACTAA 58.588 40.000 0.00 0.00 36.42 2.24
129 130 6.882678 GGACTAAACTAGGCATTTGGACTAAA 59.117 38.462 0.00 0.00 36.42 1.85
130 131 7.556635 GGACTAAACTAGGCATTTGGACTAAAT 59.443 37.037 0.00 0.00 36.42 1.40
143 144 8.785329 ATTTGGACTAAATGAAGAAGACTCTC 57.215 34.615 0.00 0.00 37.59 3.20
144 145 6.918067 TGGACTAAATGAAGAAGACTCTCA 57.082 37.500 0.00 0.00 0.00 3.27
145 146 7.303182 TGGACTAAATGAAGAAGACTCTCAA 57.697 36.000 0.00 0.00 0.00 3.02
146 147 7.911651 TGGACTAAATGAAGAAGACTCTCAAT 58.088 34.615 0.00 0.00 0.00 2.57
147 148 7.821359 TGGACTAAATGAAGAAGACTCTCAATG 59.179 37.037 0.00 0.00 0.00 2.82
148 149 8.037758 GGACTAAATGAAGAAGACTCTCAATGA 58.962 37.037 0.00 0.00 0.00 2.57
150 151 8.811017 ACTAAATGAAGAAGACTCTCAATGAGA 58.189 33.333 12.87 12.87 45.39 3.27
177 178 5.428184 TTTTGGGACTTTTCCAACAATGT 57.572 34.783 0.00 0.00 44.98 2.71
178 179 4.664150 TTGGGACTTTTCCAACAATGTC 57.336 40.909 0.00 0.00 44.98 3.06
179 180 2.962421 TGGGACTTTTCCAACAATGTCC 59.038 45.455 9.10 9.10 44.98 4.02
180 181 3.660501 GGACTTTTCCAACAATGTCCC 57.339 47.619 7.08 0.00 41.80 4.46
181 182 3.230976 GGACTTTTCCAACAATGTCCCT 58.769 45.455 7.08 0.00 41.80 4.20
182 183 3.255888 GGACTTTTCCAACAATGTCCCTC 59.744 47.826 7.08 0.00 41.80 4.30
183 184 3.230976 ACTTTTCCAACAATGTCCCTCC 58.769 45.455 0.00 0.00 0.00 4.30
184 185 3.230134 CTTTTCCAACAATGTCCCTCCA 58.770 45.455 0.00 0.00 0.00 3.86
185 186 3.541242 TTTCCAACAATGTCCCTCCAT 57.459 42.857 0.00 0.00 0.00 3.41
186 187 2.512692 TCCAACAATGTCCCTCCATG 57.487 50.000 0.00 0.00 0.00 3.66
187 188 0.819582 CCAACAATGTCCCTCCATGC 59.180 55.000 0.00 0.00 0.00 4.06
188 189 1.548081 CAACAATGTCCCTCCATGCA 58.452 50.000 0.00 0.00 0.00 3.96
189 190 1.203052 CAACAATGTCCCTCCATGCAC 59.797 52.381 0.00 0.00 0.00 4.57
190 191 0.323725 ACAATGTCCCTCCATGCACC 60.324 55.000 0.00 0.00 0.00 5.01
191 192 1.039233 CAATGTCCCTCCATGCACCC 61.039 60.000 0.00 0.00 0.00 4.61
192 193 1.508667 AATGTCCCTCCATGCACCCA 61.509 55.000 0.00 0.00 0.00 4.51
193 194 1.291459 ATGTCCCTCCATGCACCCAT 61.291 55.000 0.00 0.00 0.00 4.00
194 195 1.307647 GTCCCTCCATGCACCCATT 59.692 57.895 0.00 0.00 0.00 3.16
195 196 1.039233 GTCCCTCCATGCACCCATTG 61.039 60.000 0.00 0.00 0.00 2.82
196 197 1.759299 CCCTCCATGCACCCATTGG 60.759 63.158 0.00 0.00 37.80 3.16
197 198 2.428925 CCTCCATGCACCCATTGGC 61.429 63.158 0.00 0.00 33.59 4.52
198 199 2.364056 TCCATGCACCCATTGGCC 60.364 61.111 0.00 0.00 33.59 5.36
199 200 3.472726 CCATGCACCCATTGGCCC 61.473 66.667 0.00 0.00 33.59 5.80
200 201 3.840594 CATGCACCCATTGGCCCG 61.841 66.667 0.00 0.00 33.59 6.13
205 206 4.839706 ACCCATTGGCCCGCCATC 62.840 66.667 9.70 0.00 46.64 3.51
208 209 4.837797 CATTGGCCCGCCATCCCA 62.838 66.667 9.70 0.00 46.64 4.37
209 210 3.836481 ATTGGCCCGCCATCCCAT 61.836 61.111 9.70 0.00 46.64 4.00
210 211 4.837797 TTGGCCCGCCATCCCATG 62.838 66.667 9.70 0.00 46.64 3.66
220 221 2.747396 CCATCCCATGGTGTTGTTTG 57.253 50.000 11.73 0.00 45.54 2.93
221 222 2.246469 CCATCCCATGGTGTTGTTTGA 58.754 47.619 11.73 0.00 45.54 2.69
222 223 2.833338 CCATCCCATGGTGTTGTTTGAT 59.167 45.455 11.73 0.27 45.54 2.57
223 224 3.261390 CCATCCCATGGTGTTGTTTGATT 59.739 43.478 11.73 0.00 45.54 2.57
224 225 4.247258 CATCCCATGGTGTTGTTTGATTG 58.753 43.478 11.73 0.00 0.00 2.67
225 226 3.303938 TCCCATGGTGTTGTTTGATTGT 58.696 40.909 11.73 0.00 0.00 2.71
226 227 3.708631 TCCCATGGTGTTGTTTGATTGTT 59.291 39.130 11.73 0.00 0.00 2.83
227 228 4.895889 TCCCATGGTGTTGTTTGATTGTTA 59.104 37.500 11.73 0.00 0.00 2.41
228 229 5.541868 TCCCATGGTGTTGTTTGATTGTTAT 59.458 36.000 11.73 0.00 0.00 1.89
229 230 6.042552 TCCCATGGTGTTGTTTGATTGTTATT 59.957 34.615 11.73 0.00 0.00 1.40
230 231 6.709846 CCCATGGTGTTGTTTGATTGTTATTT 59.290 34.615 11.73 0.00 0.00 1.40
231 232 7.228308 CCCATGGTGTTGTTTGATTGTTATTTT 59.772 33.333 11.73 0.00 0.00 1.82
232 233 8.619546 CCATGGTGTTGTTTGATTGTTATTTTT 58.380 29.630 2.57 0.00 0.00 1.94
233 234 9.649024 CATGGTGTTGTTTGATTGTTATTTTTC 57.351 29.630 0.00 0.00 0.00 2.29
234 235 9.612066 ATGGTGTTGTTTGATTGTTATTTTTCT 57.388 25.926 0.00 0.00 0.00 2.52
256 257 9.982651 TTTCTATATACTAGAAGCAACATGGTC 57.017 33.333 0.00 0.00 35.30 4.02
257 258 8.706322 TCTATATACTAGAAGCAACATGGTCA 57.294 34.615 0.00 0.00 0.00 4.02
258 259 9.314133 TCTATATACTAGAAGCAACATGGTCAT 57.686 33.333 0.00 0.00 0.00 3.06
259 260 9.935241 CTATATACTAGAAGCAACATGGTCATT 57.065 33.333 0.00 0.00 0.00 2.57
263 264 7.944729 ACTAGAAGCAACATGGTCATTTAAT 57.055 32.000 0.00 0.00 0.00 1.40
265 266 9.461312 ACTAGAAGCAACATGGTCATTTAATAA 57.539 29.630 0.00 0.00 0.00 1.40
266 267 9.722056 CTAGAAGCAACATGGTCATTTAATAAC 57.278 33.333 0.00 0.00 0.00 1.89
267 268 7.547227 AGAAGCAACATGGTCATTTAATAACC 58.453 34.615 0.00 0.00 0.00 2.85
268 269 7.397192 AGAAGCAACATGGTCATTTAATAACCT 59.603 33.333 0.00 0.00 34.05 3.50
269 270 7.100458 AGCAACATGGTCATTTAATAACCTC 57.900 36.000 0.00 0.00 34.05 3.85
270 271 6.891908 AGCAACATGGTCATTTAATAACCTCT 59.108 34.615 0.00 0.00 34.05 3.69
271 272 8.052748 AGCAACATGGTCATTTAATAACCTCTA 58.947 33.333 0.00 0.00 34.05 2.43
272 273 8.345565 GCAACATGGTCATTTAATAACCTCTAG 58.654 37.037 0.00 0.00 34.05 2.43
273 274 9.613428 CAACATGGTCATTTAATAACCTCTAGA 57.387 33.333 0.00 0.00 34.05 2.43
277 278 9.853177 ATGGTCATTTAATAACCTCTAGAAAGG 57.147 33.333 0.00 0.00 42.55 3.11
278 279 8.272173 TGGTCATTTAATAACCTCTAGAAAGGG 58.728 37.037 0.00 0.00 41.04 3.95
279 280 8.491958 GGTCATTTAATAACCTCTAGAAAGGGA 58.508 37.037 3.61 0.00 41.04 4.20
280 281 9.327628 GTCATTTAATAACCTCTAGAAAGGGAC 57.672 37.037 3.61 0.00 41.04 4.46
284 285 8.779096 TTAATAACCTCTAGAAAGGGACTAGG 57.221 38.462 3.61 0.00 38.49 3.02
285 286 3.691698 ACCTCTAGAAAGGGACTAGGG 57.308 52.381 3.61 0.00 38.49 3.53
286 287 3.208173 ACCTCTAGAAAGGGACTAGGGA 58.792 50.000 3.61 0.00 39.89 4.20
287 288 3.052717 ACCTCTAGAAAGGGACTAGGGAC 60.053 52.174 3.61 0.00 39.89 4.46
288 289 3.205733 CCTCTAGAAAGGGACTAGGGACT 59.794 52.174 0.00 0.00 39.89 3.85
289 290 4.326291 CCTCTAGAAAGGGACTAGGGACTT 60.326 50.000 0.00 0.00 39.89 3.01
290 291 5.274015 CTCTAGAAAGGGACTAGGGACTTT 58.726 45.833 7.31 7.31 39.89 2.66
291 292 5.662597 TCTAGAAAGGGACTAGGGACTTTT 58.337 41.667 8.55 1.28 38.49 2.27
292 293 6.089502 TCTAGAAAGGGACTAGGGACTTTTT 58.910 40.000 8.55 6.48 38.49 1.94
293 294 7.251195 TCTAGAAAGGGACTAGGGACTTTTTA 58.749 38.462 8.55 7.08 38.49 1.52
294 295 6.375830 AGAAAGGGACTAGGGACTTTTTAG 57.624 41.667 8.55 0.00 38.49 1.85
295 296 5.850583 AGAAAGGGACTAGGGACTTTTTAGT 59.149 40.000 8.55 0.00 38.49 2.24
296 297 5.758790 AAGGGACTAGGGACTTTTTAGTC 57.241 43.478 0.00 3.01 38.49 2.59
297 298 5.026093 AGGGACTAGGGACTTTTTAGTCT 57.974 43.478 9.84 0.00 41.77 3.24
298 299 5.024785 AGGGACTAGGGACTTTTTAGTCTC 58.975 45.833 9.84 6.72 42.56 3.36
302 303 5.652324 ACTAGGGACTTTTTAGTCTCTGGA 58.348 41.667 20.87 2.39 46.69 3.86
303 304 6.082707 ACTAGGGACTTTTTAGTCTCTGGAA 58.917 40.000 20.87 1.77 46.69 3.53
304 305 5.906772 AGGGACTTTTTAGTCTCTGGAAA 57.093 39.130 6.89 0.00 46.88 3.13
305 306 5.622180 AGGGACTTTTTAGTCTCTGGAAAC 58.378 41.667 6.89 0.00 46.88 2.78
306 307 5.132144 AGGGACTTTTTAGTCTCTGGAAACA 59.868 40.000 6.89 0.00 46.88 2.83
307 308 5.826208 GGGACTTTTTAGTCTCTGGAAACAA 59.174 40.000 5.40 0.00 38.28 2.83
308 309 6.320418 GGGACTTTTTAGTCTCTGGAAACAAA 59.680 38.462 5.40 0.00 38.28 2.83
309 310 7.194278 GGACTTTTTAGTCTCTGGAAACAAAC 58.806 38.462 5.40 0.00 38.28 2.93
310 311 7.067129 GGACTTTTTAGTCTCTGGAAACAAACT 59.933 37.037 5.40 0.00 38.28 2.66
311 312 7.762382 ACTTTTTAGTCTCTGGAAACAAACTG 58.238 34.615 0.00 0.00 42.06 3.16
312 313 6.693315 TTTTAGTCTCTGGAAACAAACTGG 57.307 37.500 0.00 0.00 42.06 4.00
313 314 3.214696 AGTCTCTGGAAACAAACTGGG 57.785 47.619 0.00 0.00 42.06 4.45
314 315 2.777692 AGTCTCTGGAAACAAACTGGGA 59.222 45.455 0.00 0.00 42.06 4.37
315 316 3.202151 AGTCTCTGGAAACAAACTGGGAA 59.798 43.478 0.00 0.00 42.06 3.97
316 317 3.565902 GTCTCTGGAAACAAACTGGGAAG 59.434 47.826 0.00 0.00 42.06 3.46
317 318 2.887152 CTCTGGAAACAAACTGGGAAGG 59.113 50.000 0.00 0.00 42.06 3.46
318 319 2.512056 TCTGGAAACAAACTGGGAAGGA 59.488 45.455 0.00 0.00 42.06 3.36
319 320 2.623416 CTGGAAACAAACTGGGAAGGAC 59.377 50.000 0.00 0.00 42.06 3.85
320 321 2.243736 TGGAAACAAACTGGGAAGGACT 59.756 45.455 0.00 0.00 37.44 3.85
321 322 3.296854 GGAAACAAACTGGGAAGGACTT 58.703 45.455 0.00 0.00 0.00 3.01
322 323 3.704566 GGAAACAAACTGGGAAGGACTTT 59.295 43.478 0.00 0.00 0.00 2.66
323 324 4.161565 GGAAACAAACTGGGAAGGACTTTT 59.838 41.667 0.00 0.00 0.00 2.27
324 325 5.361571 GGAAACAAACTGGGAAGGACTTTTA 59.638 40.000 0.00 0.00 0.00 1.52
325 326 6.461092 GGAAACAAACTGGGAAGGACTTTTAG 60.461 42.308 0.00 0.00 0.00 1.85
326 327 4.470602 ACAAACTGGGAAGGACTTTTAGG 58.529 43.478 0.00 0.00 0.00 2.69
327 328 3.808834 AACTGGGAAGGACTTTTAGGG 57.191 47.619 0.00 0.00 0.00 3.53
328 329 1.354705 ACTGGGAAGGACTTTTAGGGC 59.645 52.381 0.00 0.00 0.00 5.19
329 330 1.354368 CTGGGAAGGACTTTTAGGGCA 59.646 52.381 0.00 0.00 0.00 5.36
330 331 2.000048 TGGGAAGGACTTTTAGGGCAT 59.000 47.619 0.00 0.00 0.00 4.40
331 332 2.291540 TGGGAAGGACTTTTAGGGCATG 60.292 50.000 0.00 0.00 0.00 4.06
332 333 2.291605 GGGAAGGACTTTTAGGGCATGT 60.292 50.000 0.00 0.00 0.00 3.21
333 334 3.053917 GGGAAGGACTTTTAGGGCATGTA 60.054 47.826 0.00 0.00 0.00 2.29
334 335 3.945921 GGAAGGACTTTTAGGGCATGTAC 59.054 47.826 0.00 0.00 0.00 2.90
335 336 4.566907 GGAAGGACTTTTAGGGCATGTACA 60.567 45.833 0.00 0.00 0.00 2.90
336 337 4.650972 AGGACTTTTAGGGCATGTACAA 57.349 40.909 0.00 0.00 0.00 2.41
337 338 5.193099 AGGACTTTTAGGGCATGTACAAT 57.807 39.130 0.00 0.00 0.00 2.71
338 339 4.949856 AGGACTTTTAGGGCATGTACAATG 59.050 41.667 0.00 0.12 0.00 2.82
339 340 4.440112 GGACTTTTAGGGCATGTACAATGC 60.440 45.833 17.01 17.01 43.85 3.56
346 347 0.991344 GCATGTACAATGCCAAACGC 59.009 50.000 15.31 0.00 39.01 4.84
347 348 1.402720 GCATGTACAATGCCAAACGCT 60.403 47.619 15.31 0.00 39.01 5.07
348 349 2.926159 GCATGTACAATGCCAAACGCTT 60.926 45.455 15.31 0.00 39.01 4.68
349 350 2.414058 TGTACAATGCCAAACGCTTG 57.586 45.000 0.00 0.00 38.78 4.01
350 351 1.950216 TGTACAATGCCAAACGCTTGA 59.050 42.857 0.00 0.00 38.78 3.02
351 352 2.359214 TGTACAATGCCAAACGCTTGAA 59.641 40.909 0.00 0.00 38.78 2.69
352 353 2.818130 ACAATGCCAAACGCTTGAAT 57.182 40.000 0.00 0.00 38.78 2.57
353 354 3.932545 ACAATGCCAAACGCTTGAATA 57.067 38.095 0.00 0.00 38.78 1.75
354 355 3.836949 ACAATGCCAAACGCTTGAATAG 58.163 40.909 0.00 0.00 38.78 1.73
355 356 3.181397 CAATGCCAAACGCTTGAATAGG 58.819 45.455 0.00 0.00 38.78 2.57
356 357 0.525761 TGCCAAACGCTTGAATAGGC 59.474 50.000 0.00 0.00 40.93 3.93
363 364 0.861837 CGCTTGAATAGGCGCTTAGG 59.138 55.000 7.64 0.00 44.64 2.69
364 365 1.230324 GCTTGAATAGGCGCTTAGGG 58.770 55.000 7.64 0.00 0.00 3.53
365 366 1.884235 CTTGAATAGGCGCTTAGGGG 58.116 55.000 7.64 0.00 0.00 4.79
366 367 1.416401 CTTGAATAGGCGCTTAGGGGA 59.584 52.381 7.64 0.00 0.00 4.81
367 368 1.502690 TGAATAGGCGCTTAGGGGAA 58.497 50.000 7.64 0.00 0.00 3.97
368 369 1.416401 TGAATAGGCGCTTAGGGGAAG 59.584 52.381 7.64 0.00 38.30 3.46
369 370 0.765510 AATAGGCGCTTAGGGGAAGG 59.234 55.000 7.64 0.00 35.49 3.46
370 371 0.105142 ATAGGCGCTTAGGGGAAGGA 60.105 55.000 7.64 0.00 35.49 3.36
371 372 0.105142 TAGGCGCTTAGGGGAAGGAT 60.105 55.000 7.64 0.00 35.49 3.24
372 373 0.988678 AGGCGCTTAGGGGAAGGATT 60.989 55.000 7.64 0.00 35.49 3.01
373 374 0.106669 GGCGCTTAGGGGAAGGATTT 60.107 55.000 7.64 0.00 35.49 2.17
374 375 1.685180 GGCGCTTAGGGGAAGGATTTT 60.685 52.381 7.64 0.00 35.49 1.82
375 376 2.100197 GCGCTTAGGGGAAGGATTTTT 58.900 47.619 0.00 0.00 35.49 1.94
376 377 2.159240 GCGCTTAGGGGAAGGATTTTTG 60.159 50.000 0.00 0.00 35.49 2.44
377 378 2.427095 CGCTTAGGGGAAGGATTTTTGG 59.573 50.000 0.00 0.00 35.49 3.28
378 379 2.168521 GCTTAGGGGAAGGATTTTTGGC 59.831 50.000 0.00 0.00 35.49 4.52
379 380 3.713003 CTTAGGGGAAGGATTTTTGGCT 58.287 45.455 0.00 0.00 0.00 4.75
380 381 4.867086 CTTAGGGGAAGGATTTTTGGCTA 58.133 43.478 0.00 0.00 0.00 3.93
381 382 3.845109 AGGGGAAGGATTTTTGGCTAA 57.155 42.857 0.00 0.00 0.00 3.09
382 383 3.713003 AGGGGAAGGATTTTTGGCTAAG 58.287 45.455 0.00 0.00 0.00 2.18
383 384 2.168521 GGGGAAGGATTTTTGGCTAAGC 59.831 50.000 0.00 0.00 0.00 3.09
384 385 2.159240 GGGAAGGATTTTTGGCTAAGCG 60.159 50.000 0.00 0.00 0.00 4.68
385 386 2.492088 GGAAGGATTTTTGGCTAAGCGT 59.508 45.455 0.00 0.00 0.00 5.07
386 387 3.056821 GGAAGGATTTTTGGCTAAGCGTT 60.057 43.478 0.00 0.00 0.00 4.84
387 388 3.850122 AGGATTTTTGGCTAAGCGTTC 57.150 42.857 0.00 0.00 0.00 3.95
388 389 2.161609 AGGATTTTTGGCTAAGCGTTCG 59.838 45.455 0.00 0.00 0.00 3.95
389 390 2.095415 GGATTTTTGGCTAAGCGTTCGT 60.095 45.455 0.00 0.00 0.00 3.85
390 391 2.392933 TTTTTGGCTAAGCGTTCGTG 57.607 45.000 0.00 0.00 0.00 4.35
391 392 1.301423 TTTTGGCTAAGCGTTCGTGT 58.699 45.000 0.00 0.00 0.00 4.49
392 393 1.301423 TTTGGCTAAGCGTTCGTGTT 58.699 45.000 0.00 0.00 0.00 3.32
393 394 2.151881 TTGGCTAAGCGTTCGTGTTA 57.848 45.000 0.00 0.00 0.00 2.41
394 395 1.705256 TGGCTAAGCGTTCGTGTTAG 58.295 50.000 10.09 10.09 0.00 2.34
395 396 1.270274 TGGCTAAGCGTTCGTGTTAGA 59.730 47.619 15.31 0.45 0.00 2.10
396 397 2.288334 TGGCTAAGCGTTCGTGTTAGAA 60.288 45.455 15.31 5.28 0.00 2.10
397 398 2.928116 GGCTAAGCGTTCGTGTTAGAAT 59.072 45.455 15.31 0.00 32.25 2.40
398 399 3.000022 GGCTAAGCGTTCGTGTTAGAATC 60.000 47.826 15.31 5.62 32.25 2.52
399 400 3.858238 GCTAAGCGTTCGTGTTAGAATCT 59.142 43.478 15.31 0.00 32.25 2.40
400 401 4.259451 GCTAAGCGTTCGTGTTAGAATCTG 60.259 45.833 15.31 0.00 32.25 2.90
401 402 1.993370 AGCGTTCGTGTTAGAATCTGC 59.007 47.619 0.00 0.00 32.25 4.26
402 403 1.060698 GCGTTCGTGTTAGAATCTGCC 59.939 52.381 0.00 0.00 32.25 4.85
403 404 2.607187 CGTTCGTGTTAGAATCTGCCT 58.393 47.619 0.00 0.00 32.25 4.75
404 405 2.599082 CGTTCGTGTTAGAATCTGCCTC 59.401 50.000 0.00 0.00 32.25 4.70
405 406 3.673594 CGTTCGTGTTAGAATCTGCCTCT 60.674 47.826 0.00 0.00 32.25 3.69
406 407 3.784701 TCGTGTTAGAATCTGCCTCTC 57.215 47.619 0.00 0.00 0.00 3.20
407 408 2.427453 TCGTGTTAGAATCTGCCTCTCC 59.573 50.000 0.00 0.00 0.00 3.71
408 409 2.166459 CGTGTTAGAATCTGCCTCTCCA 59.834 50.000 0.00 0.00 0.00 3.86
409 410 3.368427 CGTGTTAGAATCTGCCTCTCCAA 60.368 47.826 0.00 0.00 0.00 3.53
410 411 3.935828 GTGTTAGAATCTGCCTCTCCAAC 59.064 47.826 0.00 0.00 0.00 3.77
411 412 3.190874 GTTAGAATCTGCCTCTCCAACG 58.809 50.000 0.00 0.00 0.00 4.10
412 413 0.107945 AGAATCTGCCTCTCCAACGC 60.108 55.000 0.00 0.00 0.00 4.84
413 414 0.107945 GAATCTGCCTCTCCAACGCT 60.108 55.000 0.00 0.00 0.00 5.07
414 415 1.137086 GAATCTGCCTCTCCAACGCTA 59.863 52.381 0.00 0.00 0.00 4.26
415 416 1.195115 ATCTGCCTCTCCAACGCTAA 58.805 50.000 0.00 0.00 0.00 3.09
416 417 0.246635 TCTGCCTCTCCAACGCTAAC 59.753 55.000 0.00 0.00 0.00 2.34
417 418 0.247736 CTGCCTCTCCAACGCTAACT 59.752 55.000 0.00 0.00 0.00 2.24
418 419 0.037326 TGCCTCTCCAACGCTAACTG 60.037 55.000 0.00 0.00 0.00 3.16
419 420 0.741221 GCCTCTCCAACGCTAACTGG 60.741 60.000 0.00 0.00 0.00 4.00
420 421 0.895530 CCTCTCCAACGCTAACTGGA 59.104 55.000 0.00 0.00 39.47 3.86
421 422 1.275291 CCTCTCCAACGCTAACTGGAA 59.725 52.381 0.00 0.00 41.20 3.53
422 423 2.289444 CCTCTCCAACGCTAACTGGAAA 60.289 50.000 0.00 0.00 41.20 3.13
423 424 3.399330 CTCTCCAACGCTAACTGGAAAA 58.601 45.455 0.00 0.00 41.20 2.29
424 425 3.399330 TCTCCAACGCTAACTGGAAAAG 58.601 45.455 0.00 0.00 41.20 2.27
425 426 2.484264 CTCCAACGCTAACTGGAAAAGG 59.516 50.000 0.00 0.00 41.20 3.11
426 427 2.105134 TCCAACGCTAACTGGAAAAGGA 59.895 45.455 0.00 0.00 38.81 3.36
427 428 2.225727 CCAACGCTAACTGGAAAAGGAC 59.774 50.000 0.00 0.00 34.35 3.85
428 429 2.875933 CAACGCTAACTGGAAAAGGACA 59.124 45.455 0.00 0.00 0.00 4.02
429 430 2.767505 ACGCTAACTGGAAAAGGACAG 58.232 47.619 0.00 0.00 40.48 3.51
430 431 2.367567 ACGCTAACTGGAAAAGGACAGA 59.632 45.455 0.00 0.00 38.09 3.41
431 432 2.737252 CGCTAACTGGAAAAGGACAGAC 59.263 50.000 0.00 0.00 38.09 3.51
432 433 2.737252 GCTAACTGGAAAAGGACAGACG 59.263 50.000 0.00 0.00 38.09 4.18
433 434 1.594331 AACTGGAAAAGGACAGACGC 58.406 50.000 0.00 0.00 38.09 5.19
434 435 0.759346 ACTGGAAAAGGACAGACGCT 59.241 50.000 0.00 0.00 38.09 5.07
435 436 1.968493 ACTGGAAAAGGACAGACGCTA 59.032 47.619 0.00 0.00 38.09 4.26
436 437 2.288886 ACTGGAAAAGGACAGACGCTAC 60.289 50.000 0.00 0.00 38.09 3.58
437 438 1.336517 TGGAAAAGGACAGACGCTACG 60.337 52.381 0.00 0.00 0.00 3.51
438 439 0.714439 GAAAAGGACAGACGCTACGC 59.286 55.000 0.00 0.00 0.00 4.42
439 440 0.317479 AAAAGGACAGACGCTACGCT 59.683 50.000 0.00 0.00 0.00 5.07
440 441 1.171308 AAAGGACAGACGCTACGCTA 58.829 50.000 0.00 0.00 0.00 4.26
441 442 0.733729 AAGGACAGACGCTACGCTAG 59.266 55.000 0.00 0.00 0.00 3.42
442 443 0.392729 AGGACAGACGCTACGCTAGT 60.393 55.000 0.00 0.00 0.00 2.57
443 444 0.450983 GGACAGACGCTACGCTAGTT 59.549 55.000 0.00 0.00 0.00 2.24
444 445 1.531470 GGACAGACGCTACGCTAGTTC 60.531 57.143 0.00 0.00 0.00 3.01
445 446 1.129998 GACAGACGCTACGCTAGTTCA 59.870 52.381 0.00 0.00 0.00 3.18
446 447 1.538512 ACAGACGCTACGCTAGTTCAA 59.461 47.619 0.00 0.00 0.00 2.69
447 448 2.030540 ACAGACGCTACGCTAGTTCAAA 60.031 45.455 0.00 0.00 0.00 2.69
448 449 2.984471 CAGACGCTACGCTAGTTCAAAA 59.016 45.455 0.00 0.00 0.00 2.44
449 450 3.612860 CAGACGCTACGCTAGTTCAAAAT 59.387 43.478 0.00 0.00 0.00 1.82
450 451 4.796830 CAGACGCTACGCTAGTTCAAAATA 59.203 41.667 0.00 0.00 0.00 1.40
451 452 5.287752 CAGACGCTACGCTAGTTCAAAATAA 59.712 40.000 0.00 0.00 0.00 1.40
452 453 5.865552 AGACGCTACGCTAGTTCAAAATAAA 59.134 36.000 0.00 0.00 0.00 1.40
453 454 6.366877 AGACGCTACGCTAGTTCAAAATAAAA 59.633 34.615 0.00 0.00 0.00 1.52
454 455 6.301861 ACGCTACGCTAGTTCAAAATAAAAC 58.698 36.000 0.00 0.00 0.00 2.43
455 456 6.073657 ACGCTACGCTAGTTCAAAATAAAACA 60.074 34.615 0.00 0.00 0.00 2.83
456 457 6.461698 CGCTACGCTAGTTCAAAATAAAACAG 59.538 38.462 0.00 0.00 0.00 3.16
457 458 7.515643 GCTACGCTAGTTCAAAATAAAACAGA 58.484 34.615 0.00 0.00 0.00 3.41
458 459 8.013378 GCTACGCTAGTTCAAAATAAAACAGAA 58.987 33.333 0.00 0.00 0.00 3.02
459 460 9.314501 CTACGCTAGTTCAAAATAAAACAGAAC 57.685 33.333 0.00 0.00 38.99 3.01
460 461 6.849305 ACGCTAGTTCAAAATAAAACAGAACG 59.151 34.615 0.00 0.00 42.39 3.95
461 462 6.302313 CGCTAGTTCAAAATAAAACAGAACGG 59.698 38.462 0.00 0.00 42.39 4.44
462 463 6.087687 GCTAGTTCAAAATAAAACAGAACGGC 59.912 38.462 0.00 0.00 42.39 5.68
463 464 4.973663 AGTTCAAAATAAAACAGAACGGCG 59.026 37.500 4.80 4.80 42.39 6.46
464 465 4.815040 TCAAAATAAAACAGAACGGCGA 57.185 36.364 16.62 0.00 0.00 5.54
465 466 4.529446 TCAAAATAAAACAGAACGGCGAC 58.471 39.130 16.62 7.38 0.00 5.19
478 479 1.497722 GGCGACGAGAAAAAGCTGG 59.502 57.895 0.00 0.00 0.00 4.85
479 480 1.497722 GCGACGAGAAAAAGCTGGG 59.502 57.895 0.00 0.00 0.00 4.45
480 481 1.912371 GCGACGAGAAAAAGCTGGGG 61.912 60.000 0.00 0.00 0.00 4.96
481 482 1.876664 GACGAGAAAAAGCTGGGGC 59.123 57.895 0.00 0.00 39.06 5.80
482 483 1.912371 GACGAGAAAAAGCTGGGGCG 61.912 60.000 0.00 0.00 44.37 6.13
483 484 2.568612 GAGAAAAAGCTGGGGCGC 59.431 61.111 0.00 0.00 44.37 6.53
484 485 1.973812 GAGAAAAAGCTGGGGCGCT 60.974 57.895 7.64 0.00 44.37 5.92
498 499 3.727419 GCGCTTGATGCCTGATTTT 57.273 47.368 0.00 0.00 38.78 1.82
499 500 1.274596 GCGCTTGATGCCTGATTTTG 58.725 50.000 0.00 0.00 38.78 2.44
500 501 1.274596 CGCTTGATGCCTGATTTTGC 58.725 50.000 0.00 0.00 38.78 3.68
501 502 1.274596 GCTTGATGCCTGATTTTGCG 58.725 50.000 0.00 0.00 35.15 4.85
502 503 1.274596 CTTGATGCCTGATTTTGCGC 58.725 50.000 0.00 0.00 0.00 6.09
503 504 0.108709 TTGATGCCTGATTTTGCGCC 60.109 50.000 4.18 0.00 0.00 6.53
504 505 1.587088 GATGCCTGATTTTGCGCCG 60.587 57.895 4.18 0.00 0.00 6.46
505 506 2.941964 GATGCCTGATTTTGCGCCGG 62.942 60.000 4.18 0.00 0.00 6.13
507 508 4.834892 CCTGATTTTGCGCCGGCG 62.835 66.667 43.13 43.13 44.10 6.46
517 518 2.252855 CGCCGGCGCTAACAAAAA 59.747 55.556 38.48 0.00 0.00 1.94
518 519 1.795962 CGCCGGCGCTAACAAAAAG 60.796 57.895 38.48 5.36 0.00 2.27
519 520 1.284715 GCCGGCGCTAACAAAAAGT 59.715 52.632 12.58 0.00 0.00 2.66
520 521 0.728129 GCCGGCGCTAACAAAAAGTC 60.728 55.000 12.58 0.00 0.00 3.01
521 522 0.589223 CCGGCGCTAACAAAAAGTCA 59.411 50.000 7.64 0.00 0.00 3.41
522 523 1.399727 CCGGCGCTAACAAAAAGTCAG 60.400 52.381 7.64 0.00 0.00 3.51
523 524 1.529438 CGGCGCTAACAAAAAGTCAGA 59.471 47.619 7.64 0.00 0.00 3.27
524 525 2.032377 CGGCGCTAACAAAAAGTCAGAA 60.032 45.455 7.64 0.00 0.00 3.02
525 526 3.364964 CGGCGCTAACAAAAAGTCAGAAT 60.365 43.478 7.64 0.00 0.00 2.40
526 527 4.546570 GGCGCTAACAAAAAGTCAGAATT 58.453 39.130 7.64 0.00 0.00 2.17
527 528 4.982295 GGCGCTAACAAAAAGTCAGAATTT 59.018 37.500 7.64 0.00 0.00 1.82
528 529 5.107875 GGCGCTAACAAAAAGTCAGAATTTG 60.108 40.000 7.64 0.43 39.38 2.32
529 530 5.107875 GCGCTAACAAAAAGTCAGAATTTGG 60.108 40.000 0.00 0.00 38.14 3.28
530 531 5.402270 CGCTAACAAAAAGTCAGAATTTGGG 59.598 40.000 0.00 0.00 38.14 4.12
531 532 6.280643 GCTAACAAAAAGTCAGAATTTGGGT 58.719 36.000 0.00 0.00 38.14 4.51
532 533 6.200854 GCTAACAAAAAGTCAGAATTTGGGTG 59.799 38.462 0.00 0.00 38.14 4.61
533 534 5.022282 ACAAAAAGTCAGAATTTGGGTGG 57.978 39.130 0.00 0.00 38.14 4.61
534 535 4.141733 ACAAAAAGTCAGAATTTGGGTGGG 60.142 41.667 0.00 0.00 38.14 4.61
535 536 3.611025 AAAGTCAGAATTTGGGTGGGA 57.389 42.857 0.00 0.00 0.00 4.37
536 537 3.611025 AAGTCAGAATTTGGGTGGGAA 57.389 42.857 0.00 0.00 0.00 3.97
537 538 3.833559 AGTCAGAATTTGGGTGGGAAT 57.166 42.857 0.00 0.00 0.00 3.01
538 539 3.701664 AGTCAGAATTTGGGTGGGAATC 58.298 45.455 0.00 0.00 0.00 2.52
539 540 3.334881 AGTCAGAATTTGGGTGGGAATCT 59.665 43.478 0.00 0.00 0.00 2.40
540 541 3.445096 GTCAGAATTTGGGTGGGAATCTG 59.555 47.826 0.00 0.00 0.00 2.90
541 542 3.333381 TCAGAATTTGGGTGGGAATCTGA 59.667 43.478 0.00 0.00 0.00 3.27
542 543 4.017222 TCAGAATTTGGGTGGGAATCTGAT 60.017 41.667 0.00 0.00 0.00 2.90
543 544 4.098960 CAGAATTTGGGTGGGAATCTGATG 59.901 45.833 0.00 0.00 0.00 3.07
544 545 4.017222 AGAATTTGGGTGGGAATCTGATGA 60.017 41.667 0.00 0.00 0.00 2.92
545 546 3.824001 TTTGGGTGGGAATCTGATGAA 57.176 42.857 0.00 0.00 0.00 2.57
546 547 3.824001 TTGGGTGGGAATCTGATGAAA 57.176 42.857 0.00 0.00 0.00 2.69
547 548 3.085952 TGGGTGGGAATCTGATGAAAC 57.914 47.619 0.00 0.00 0.00 2.78
548 549 2.017049 GGGTGGGAATCTGATGAAACG 58.983 52.381 0.00 0.00 0.00 3.60
549 550 2.017049 GGTGGGAATCTGATGAAACGG 58.983 52.381 0.00 0.00 0.00 4.44
550 551 2.355716 GGTGGGAATCTGATGAAACGGA 60.356 50.000 0.00 0.00 0.00 4.69
551 552 2.678336 GTGGGAATCTGATGAAACGGAC 59.322 50.000 0.00 0.00 0.00 4.79
552 553 1.933853 GGGAATCTGATGAAACGGACG 59.066 52.381 0.00 0.00 0.00 4.79
553 554 1.933853 GGAATCTGATGAAACGGACGG 59.066 52.381 0.00 0.00 0.00 4.79
554 555 1.933853 GAATCTGATGAAACGGACGGG 59.066 52.381 0.00 0.00 0.00 5.28
555 556 1.191535 ATCTGATGAAACGGACGGGA 58.808 50.000 0.00 0.00 0.00 5.14
556 557 1.191535 TCTGATGAAACGGACGGGAT 58.808 50.000 0.00 0.00 0.00 3.85
557 558 1.553248 TCTGATGAAACGGACGGGATT 59.447 47.619 0.00 0.00 0.00 3.01
558 559 2.027561 TCTGATGAAACGGACGGGATTT 60.028 45.455 0.00 0.00 0.00 2.17
559 560 2.351726 CTGATGAAACGGACGGGATTTC 59.648 50.000 0.00 0.00 33.75 2.17
560 561 2.027561 TGATGAAACGGACGGGATTTCT 60.028 45.455 0.00 0.00 34.18 2.52
561 562 3.196039 TGATGAAACGGACGGGATTTCTA 59.804 43.478 0.00 0.00 34.18 2.10
562 563 2.963432 TGAAACGGACGGGATTTCTAC 58.037 47.619 0.00 0.00 34.18 2.59
563 564 2.274437 GAAACGGACGGGATTTCTACC 58.726 52.381 0.00 0.00 31.08 3.18
564 565 0.538584 AACGGACGGGATTTCTACCC 59.461 55.000 0.00 0.00 43.57 3.69
565 566 0.325016 ACGGACGGGATTTCTACCCT 60.325 55.000 0.00 0.00 44.72 4.34
566 567 0.104304 CGGACGGGATTTCTACCCTG 59.896 60.000 0.00 0.00 44.72 4.45
567 568 0.468648 GGACGGGATTTCTACCCTGG 59.531 60.000 0.00 0.00 44.72 4.45
568 569 0.179054 GACGGGATTTCTACCCTGGC 60.179 60.000 0.00 0.00 44.72 4.85
569 570 1.227556 CGGGATTTCTACCCTGGCG 60.228 63.158 0.00 0.00 44.72 5.69
570 571 1.912971 GGGATTTCTACCCTGGCGT 59.087 57.895 0.00 0.00 43.65 5.68
571 572 0.179054 GGGATTTCTACCCTGGCGTC 60.179 60.000 0.00 0.00 43.65 5.19
572 573 0.831307 GGATTTCTACCCTGGCGTCT 59.169 55.000 0.00 0.00 0.00 4.18
573 574 1.473434 GGATTTCTACCCTGGCGTCTG 60.473 57.143 0.00 0.00 0.00 3.51
574 575 0.541863 ATTTCTACCCTGGCGTCTGG 59.458 55.000 5.87 5.87 0.00 3.86
575 576 0.834687 TTTCTACCCTGGCGTCTGGT 60.835 55.000 12.29 9.48 36.15 4.00
576 577 0.040058 TTCTACCCTGGCGTCTGGTA 59.960 55.000 12.29 10.13 33.55 3.25
577 578 0.682209 TCTACCCTGGCGTCTGGTAC 60.682 60.000 12.29 0.00 33.55 3.34
578 579 0.683504 CTACCCTGGCGTCTGGTACT 60.684 60.000 12.29 0.00 33.55 2.73
579 580 0.625316 TACCCTGGCGTCTGGTACTA 59.375 55.000 12.29 0.00 33.55 1.82
580 581 0.683504 ACCCTGGCGTCTGGTACTAG 60.684 60.000 12.29 0.00 0.00 2.57
581 582 1.437986 CCTGGCGTCTGGTACTAGC 59.562 63.158 4.52 0.00 0.00 3.42
582 583 1.064296 CTGGCGTCTGGTACTAGCG 59.936 63.158 15.16 15.16 0.00 4.26
583 584 2.278661 GGCGTCTGGTACTAGCGC 60.279 66.667 27.17 27.17 40.17 5.92
584 585 2.278661 GCGTCTGGTACTAGCGCC 60.279 66.667 25.83 14.55 37.29 6.53
585 586 2.772691 GCGTCTGGTACTAGCGCCT 61.773 63.158 25.83 0.00 37.29 5.52
586 587 1.355916 CGTCTGGTACTAGCGCCTC 59.644 63.158 2.29 0.00 0.00 4.70
587 588 1.734748 GTCTGGTACTAGCGCCTCC 59.265 63.158 2.29 0.00 0.00 4.30
588 589 0.752376 GTCTGGTACTAGCGCCTCCT 60.752 60.000 2.29 0.00 0.00 3.69
589 590 0.841961 TCTGGTACTAGCGCCTCCTA 59.158 55.000 2.29 0.00 0.00 2.94
590 591 1.424302 TCTGGTACTAGCGCCTCCTAT 59.576 52.381 2.29 0.00 0.00 2.57
591 592 2.158505 TCTGGTACTAGCGCCTCCTATT 60.159 50.000 2.29 0.00 0.00 1.73
592 593 1.961394 TGGTACTAGCGCCTCCTATTG 59.039 52.381 2.29 0.00 0.00 1.90
593 594 1.272769 GGTACTAGCGCCTCCTATTGG 59.727 57.143 2.29 0.00 0.00 3.16
594 595 2.236766 GTACTAGCGCCTCCTATTGGA 58.763 52.381 2.29 0.00 40.69 3.53
605 606 2.775418 TCCTATTGGAGATGCCTTGGA 58.225 47.619 0.00 0.00 37.46 3.53
606 607 2.439507 TCCTATTGGAGATGCCTTGGAC 59.560 50.000 0.00 0.00 37.46 4.02
607 608 2.441001 CCTATTGGAGATGCCTTGGACT 59.559 50.000 0.00 0.00 37.63 3.85
608 609 3.648067 CCTATTGGAGATGCCTTGGACTA 59.352 47.826 0.00 0.00 37.63 2.59
609 610 3.853355 ATTGGAGATGCCTTGGACTAG 57.147 47.619 0.00 0.00 37.63 2.57
610 611 2.550277 TGGAGATGCCTTGGACTAGA 57.450 50.000 0.00 0.00 37.63 2.43
611 612 2.832838 TGGAGATGCCTTGGACTAGAA 58.167 47.619 0.00 0.00 37.63 2.10
612 613 3.181329 TGGAGATGCCTTGGACTAGAAA 58.819 45.455 0.00 0.00 37.63 2.52
613 614 3.055094 TGGAGATGCCTTGGACTAGAAAC 60.055 47.826 0.00 0.00 37.63 2.78
614 615 3.198853 GGAGATGCCTTGGACTAGAAACT 59.801 47.826 0.00 0.00 0.00 2.66
615 616 4.323868 GGAGATGCCTTGGACTAGAAACTT 60.324 45.833 0.00 0.00 0.00 2.66
616 617 5.248380 AGATGCCTTGGACTAGAAACTTT 57.752 39.130 0.00 0.00 0.00 2.66
617 618 5.635120 AGATGCCTTGGACTAGAAACTTTT 58.365 37.500 0.00 0.00 0.00 2.27
618 619 6.071320 AGATGCCTTGGACTAGAAACTTTTT 58.929 36.000 0.00 0.00 0.00 1.94
619 620 7.231467 AGATGCCTTGGACTAGAAACTTTTTA 58.769 34.615 0.00 0.00 0.00 1.52
620 621 6.877611 TGCCTTGGACTAGAAACTTTTTAG 57.122 37.500 0.00 0.00 0.00 1.85
621 622 5.768164 TGCCTTGGACTAGAAACTTTTTAGG 59.232 40.000 0.00 0.00 0.00 2.69
622 623 5.768662 GCCTTGGACTAGAAACTTTTTAGGT 59.231 40.000 0.00 0.00 0.00 3.08
623 624 6.294010 GCCTTGGACTAGAAACTTTTTAGGTG 60.294 42.308 0.00 0.00 0.00 4.00
624 625 6.996282 CCTTGGACTAGAAACTTTTTAGGTGA 59.004 38.462 0.00 0.00 0.00 4.02
625 626 7.173390 CCTTGGACTAGAAACTTTTTAGGTGAG 59.827 40.741 0.00 0.00 0.00 3.51
626 627 7.369551 TGGACTAGAAACTTTTTAGGTGAGA 57.630 36.000 0.00 0.00 0.00 3.27
627 628 7.215085 TGGACTAGAAACTTTTTAGGTGAGAC 58.785 38.462 0.00 0.00 0.00 3.36
628 629 7.070821 TGGACTAGAAACTTTTTAGGTGAGACT 59.929 37.037 0.00 0.00 0.00 3.24
629 630 8.583296 GGACTAGAAACTTTTTAGGTGAGACTA 58.417 37.037 0.00 0.00 0.00 2.59
630 631 9.628746 GACTAGAAACTTTTTAGGTGAGACTAG 57.371 37.037 0.00 0.00 0.00 2.57
631 632 9.364653 ACTAGAAACTTTTTAGGTGAGACTAGA 57.635 33.333 0.00 0.00 0.00 2.43
634 635 9.901172 AGAAACTTTTTAGGTGAGACTAGAAAA 57.099 29.630 0.00 0.00 29.91 2.29
637 638 9.682465 AACTTTTTAGGTGAGACTAGAAAAAGT 57.318 29.630 15.95 15.95 41.29 2.66
638 639 9.682465 ACTTTTTAGGTGAGACTAGAAAAAGTT 57.318 29.630 15.95 6.42 39.03 2.66
640 641 9.901172 TTTTTAGGTGAGACTAGAAAAAGTTCT 57.099 29.630 0.00 0.00 46.18 3.01
659 660 6.342338 GTTCTAGGACTAGAGAACCAAACA 57.658 41.667 8.86 0.00 43.80 2.83
660 661 5.979288 TCTAGGACTAGAGAACCAAACAC 57.021 43.478 4.98 0.00 37.28 3.32
661 662 4.771054 TCTAGGACTAGAGAACCAAACACC 59.229 45.833 4.98 0.00 37.28 4.16
662 663 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
663 664 3.071167 AGGACTAGAGAACCAAACACCAC 59.929 47.826 0.00 0.00 0.00 4.16
664 665 3.400255 GACTAGAGAACCAAACACCACC 58.600 50.000 0.00 0.00 0.00 4.61
665 666 3.046374 ACTAGAGAACCAAACACCACCT 58.954 45.455 0.00 0.00 0.00 4.00
666 667 3.458487 ACTAGAGAACCAAACACCACCTT 59.542 43.478 0.00 0.00 0.00 3.50
667 668 4.657039 ACTAGAGAACCAAACACCACCTTA 59.343 41.667 0.00 0.00 0.00 2.69
668 669 4.086706 AGAGAACCAAACACCACCTTAG 57.913 45.455 0.00 0.00 0.00 2.18
669 670 2.552743 GAGAACCAAACACCACCTTAGC 59.447 50.000 0.00 0.00 0.00 3.09
670 671 1.611977 GAACCAAACACCACCTTAGCC 59.388 52.381 0.00 0.00 0.00 3.93
671 672 0.553819 ACCAAACACCACCTTAGCCA 59.446 50.000 0.00 0.00 0.00 4.75
672 673 1.247567 CCAAACACCACCTTAGCCAG 58.752 55.000 0.00 0.00 0.00 4.85
673 674 1.478654 CCAAACACCACCTTAGCCAGT 60.479 52.381 0.00 0.00 0.00 4.00
674 675 1.880027 CAAACACCACCTTAGCCAGTC 59.120 52.381 0.00 0.00 0.00 3.51
675 676 1.136828 AACACCACCTTAGCCAGTCA 58.863 50.000 0.00 0.00 0.00 3.41
676 677 1.136828 ACACCACCTTAGCCAGTCAA 58.863 50.000 0.00 0.00 0.00 3.18
677 678 1.202770 ACACCACCTTAGCCAGTCAAC 60.203 52.381 0.00 0.00 0.00 3.18
678 679 1.136828 ACCACCTTAGCCAGTCAACA 58.863 50.000 0.00 0.00 0.00 3.33
679 680 1.705186 ACCACCTTAGCCAGTCAACAT 59.295 47.619 0.00 0.00 0.00 2.71
705 706 5.668558 AAAACACTGATTAGTTCGTGACC 57.331 39.130 0.00 0.00 34.07 4.02
909 918 1.513158 CACTCCGCCGATCAGAACT 59.487 57.895 0.00 0.00 0.00 3.01
910 919 0.526524 CACTCCGCCGATCAGAACTC 60.527 60.000 0.00 0.00 0.00 3.01
911 920 0.681564 ACTCCGCCGATCAGAACTCT 60.682 55.000 0.00 0.00 0.00 3.24
1014 1024 3.881092 CTCCGATCCGTCGCCATCG 62.881 68.421 14.60 14.60 46.32 3.84
1034 1044 3.756963 TCGACCTATTCATCCACGGATAG 59.243 47.826 0.00 0.00 32.93 2.08
1432 1443 6.189859 TGCCAATCAGATTCAGGAGTAAAAT 58.810 36.000 4.04 0.00 0.00 1.82
1872 1891 5.163426 CCATGTTAGCTAAAATGGCAATCCA 60.163 40.000 33.16 13.91 42.42 3.41
1925 1944 2.251818 TGAGCTAGAACTTGTGAGGCT 58.748 47.619 0.00 0.00 0.00 4.58
1934 1953 1.071605 CTTGTGAGGCTGAACTACGC 58.928 55.000 0.00 0.00 0.00 4.42
2095 2114 1.202582 GCCTTCGAGTGAGTTCTGCTA 59.797 52.381 0.00 0.00 0.00 3.49
2124 2143 9.836076 CAATAATGTCAAAGCCACTATCATATG 57.164 33.333 0.00 0.00 0.00 1.78
2151 2170 5.862845 TCTGGCATCATATTTTCCTCTCTC 58.137 41.667 0.00 0.00 0.00 3.20
2377 2396 7.596749 ACGTATTGAACTTGAATCTCGAAAT 57.403 32.000 0.00 0.00 0.00 2.17
2563 2582 8.096414 TCTAACTGATCTCATCATGAAACAACA 58.904 33.333 0.00 0.00 38.85 3.33
2649 2668 5.597182 AGGCACATCTTATGCAGATTTCATT 59.403 36.000 0.00 0.00 45.27 2.57
2958 2977 8.239998 TCAGAGAACTCTTATCATATATGCACG 58.760 37.037 7.92 0.00 37.98 5.34
2995 3014 7.946381 TTCCACATAATACTTAATGTTGGCA 57.054 32.000 0.00 0.00 0.00 4.92
3367 3386 0.807496 GATGTCCAAACTGCTCTGGC 59.193 55.000 0.00 0.00 39.26 4.85
3690 3709 9.524106 TGTTGTTTGTAGATAATAGTATGGACG 57.476 33.333 0.00 0.00 0.00 4.79
3909 3936 9.800433 AATTCAATCGCATTAATGAATGTTACA 57.200 25.926 19.73 0.00 43.82 2.41
4051 4078 3.118555 TGTGATGTGTAATACTTCCCCGG 60.119 47.826 0.00 0.00 33.68 5.73
4182 4209 7.519347 AATACAAAGTTAGTATTCCCTGGGA 57.481 36.000 12.53 12.53 37.56 4.37
4184 4211 4.600111 ACAAAGTTAGTATTCCCTGGGACA 59.400 41.667 16.85 7.51 0.00 4.02
4185 4212 5.253096 ACAAAGTTAGTATTCCCTGGGACAT 59.747 40.000 16.85 14.28 38.20 3.06
4187 4214 7.128883 ACAAAGTTAGTATTCCCTGGGACATAT 59.871 37.037 16.85 9.38 38.20 1.78
4188 4215 7.707467 AAGTTAGTATTCCCTGGGACATATT 57.293 36.000 16.85 14.51 38.20 1.28
4191 4218 8.826765 AGTTAGTATTCCCTGGGACATATTATG 58.173 37.037 16.85 2.03 38.20 1.90
4192 4219 6.642733 AGTATTCCCTGGGACATATTATGG 57.357 41.667 16.85 0.00 38.20 2.74
4193 4220 4.953781 ATTCCCTGGGACATATTATGGG 57.046 45.455 16.85 0.00 37.64 4.00
4261 5424 7.448469 ACTGCATTAGTCAGAGTACCAAAAATT 59.552 33.333 0.00 0.00 33.17 1.82
4285 5448 6.575162 TGAAGTTTTGAGCTTTCTTATCCC 57.425 37.500 0.00 0.00 0.00 3.85
4291 5454 2.573462 TGAGCTTTCTTATCCCAGCAGT 59.427 45.455 0.00 0.00 34.49 4.40
4505 5668 2.229784 CCTCTTTTGGTGCTTGATGTCC 59.770 50.000 0.00 0.00 0.00 4.02
4519 5682 3.473625 TGATGTCCTGCAAGATAGCATG 58.526 45.455 0.00 0.00 44.68 4.06
4529 5692 3.603532 CAAGATAGCATGATACCGGCAT 58.396 45.455 0.00 0.00 0.00 4.40
4531 5694 2.568956 AGATAGCATGATACCGGCATGT 59.431 45.455 18.19 10.06 43.79 3.21
4545 5711 4.574828 ACCGGCATGTTTCATCTTGTATAC 59.425 41.667 0.00 0.00 0.00 1.47
4570 5736 2.496070 TCACTACTTCCAGACAATCCGG 59.504 50.000 0.00 0.00 0.00 5.14
4571 5737 2.496070 CACTACTTCCAGACAATCCGGA 59.504 50.000 6.61 6.61 0.00 5.14
4598 5764 0.895530 ACACGGACTGGACATGTAGG 59.104 55.000 0.00 0.00 0.00 3.18
4612 5780 0.973632 TGTAGGTCGATGGCAAGTGT 59.026 50.000 0.00 0.00 0.00 3.55
4616 5784 1.639298 GGTCGATGGCAAGTGTGAGC 61.639 60.000 0.00 0.00 0.00 4.26
4628 5796 2.327343 TGTGAGCGCCTCATTGCAC 61.327 57.895 2.29 2.08 42.73 4.57
4634 5802 2.679934 CGCCTCATTGCACGCTTGA 61.680 57.895 0.00 0.00 0.00 3.02
4643 5811 1.734477 GCACGCTTGAGCTTCGAGA 60.734 57.895 0.00 0.00 39.32 4.04
4648 5816 1.528603 CGCTTGAGCTTCGAGAATTGC 60.529 52.381 1.07 0.00 39.32 3.56
4660 5828 3.055167 TCGAGAATTGCTGGATCCAGAAA 60.055 43.478 40.29 36.74 44.82 2.52
4679 5847 6.830838 CCAGAAAACCCTCAAAGATAATAGCT 59.169 38.462 0.00 0.00 0.00 3.32
4682 5850 8.109634 AGAAAACCCTCAAAGATAATAGCTGAA 58.890 33.333 0.00 0.00 0.00 3.02
4701 5869 7.640675 GCTGAAGCACCTAGGTAATTACCGT 62.641 48.000 25.44 16.32 45.22 4.83
4711 5879 2.931969 GGTAATTACCGTTCTTGTCCCG 59.068 50.000 18.70 0.00 36.50 5.14
4715 5883 0.314935 TACCGTTCTTGTCCCGACAC 59.685 55.000 0.00 0.00 41.67 3.67
4717 5885 1.219522 CCGTTCTTGTCCCGACACAC 61.220 60.000 0.00 0.00 41.67 3.82
4742 5910 2.680352 GAGGCACCTCGGTCTCCA 60.680 66.667 0.00 0.00 33.06 3.86
4762 5930 4.813750 CAATCTTGGAAAAGCCTCCATT 57.186 40.909 0.91 0.00 45.03 3.16
4763 5931 5.156608 CAATCTTGGAAAAGCCTCCATTT 57.843 39.130 0.91 0.00 45.03 2.32
4764 5932 4.813750 ATCTTGGAAAAGCCTCCATTTG 57.186 40.909 0.91 0.00 45.03 2.32
4778 5946 4.632688 CCTCCATTTGCATTCATTTTCACC 59.367 41.667 0.00 0.00 0.00 4.02
4779 5947 4.244066 TCCATTTGCATTCATTTTCACCG 58.756 39.130 0.00 0.00 0.00 4.94
4788 5956 2.441410 TCATTTTCACCGCATGGCTAA 58.559 42.857 0.00 0.00 39.70 3.09
4811 5979 1.745489 CGGGAGCCAACCTAACAGC 60.745 63.158 0.00 0.00 0.00 4.40
4835 6003 3.283751 CGGTTGCCCACTATTATTTCCA 58.716 45.455 0.00 0.00 0.00 3.53
4839 6007 5.598417 GGTTGCCCACTATTATTTCCAGAAT 59.402 40.000 0.00 0.00 0.00 2.40
4841 6009 6.959639 TGCCCACTATTATTTCCAGAATTC 57.040 37.500 0.00 0.00 0.00 2.17
4846 6014 9.573166 CCCACTATTATTTCCAGAATTCACATA 57.427 33.333 8.44 0.00 0.00 2.29
4853 6021 4.487714 TCCAGAATTCACATACAGGTCC 57.512 45.455 8.44 0.00 0.00 4.46
4854 6022 4.104086 TCCAGAATTCACATACAGGTCCT 58.896 43.478 8.44 0.00 0.00 3.85
4855 6023 4.536090 TCCAGAATTCACATACAGGTCCTT 59.464 41.667 8.44 0.00 0.00 3.36
4856 6024 5.724370 TCCAGAATTCACATACAGGTCCTTA 59.276 40.000 8.44 0.00 0.00 2.69
4857 6025 6.051717 CCAGAATTCACATACAGGTCCTTAG 58.948 44.000 8.44 0.00 0.00 2.18
4858 6026 5.525378 CAGAATTCACATACAGGTCCTTAGC 59.475 44.000 8.44 0.00 0.00 3.09
4859 6027 3.520290 TTCACATACAGGTCCTTAGCG 57.480 47.619 0.00 0.00 0.00 4.26
4860 6028 1.136305 TCACATACAGGTCCTTAGCGC 59.864 52.381 0.00 0.00 0.00 5.92
4861 6029 0.102481 ACATACAGGTCCTTAGCGCG 59.898 55.000 0.00 0.00 0.00 6.86
4862 6030 0.597637 CATACAGGTCCTTAGCGCGG 60.598 60.000 8.83 0.00 0.00 6.46
4863 6031 1.745320 ATACAGGTCCTTAGCGCGGG 61.745 60.000 8.83 6.24 0.00 6.13
4874 6042 4.742201 GCGCGGGCTGTTCTCTCA 62.742 66.667 18.33 0.00 35.83 3.27
4875 6043 2.507992 CGCGGGCTGTTCTCTCAG 60.508 66.667 0.00 0.00 38.35 3.35
4876 6044 2.125350 GCGGGCTGTTCTCTCAGG 60.125 66.667 0.00 0.00 36.12 3.86
4877 6045 2.650116 GCGGGCTGTTCTCTCAGGA 61.650 63.158 0.00 0.00 36.12 3.86
4878 6046 1.975327 CGGGCTGTTCTCTCAGGAA 59.025 57.895 0.00 0.00 36.12 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.137615 ACCCCCTAAATGCCCGGC 62.138 66.667 1.04 1.04 0.00 6.13
3 4 2.123897 CACCCCCTAAATGCCCGG 60.124 66.667 0.00 0.00 0.00 5.73
5 6 0.901827 CAAACACCCCCTAAATGCCC 59.098 55.000 0.00 0.00 0.00 5.36
9 10 4.346709 CCTGAAAACAAACACCCCCTAAAT 59.653 41.667 0.00 0.00 0.00 1.40
10 11 3.707102 CCTGAAAACAAACACCCCCTAAA 59.293 43.478 0.00 0.00 0.00 1.85
11 12 3.301274 CCTGAAAACAAACACCCCCTAA 58.699 45.455 0.00 0.00 0.00 2.69
12 13 2.425102 CCCTGAAAACAAACACCCCCTA 60.425 50.000 0.00 0.00 0.00 3.53
13 14 1.691163 CCCTGAAAACAAACACCCCCT 60.691 52.381 0.00 0.00 0.00 4.79
15 16 1.411246 GTCCCTGAAAACAAACACCCC 59.589 52.381 0.00 0.00 0.00 4.95
16 17 2.384828 AGTCCCTGAAAACAAACACCC 58.615 47.619 0.00 0.00 0.00 4.61
17 18 4.465632 AAAGTCCCTGAAAACAAACACC 57.534 40.909 0.00 0.00 0.00 4.16
37 38 8.050930 AGACTTTTTCTAGTCCCTACACAAAAA 58.949 33.333 0.00 0.00 44.50 1.94
38 39 7.571025 AGACTTTTTCTAGTCCCTACACAAAA 58.429 34.615 0.00 0.00 44.50 2.44
39 40 7.070821 AGAGACTTTTTCTAGTCCCTACACAAA 59.929 37.037 0.00 0.00 44.50 2.83
40 41 6.553852 AGAGACTTTTTCTAGTCCCTACACAA 59.446 38.462 0.00 0.00 44.50 3.33
41 42 6.075984 AGAGACTTTTTCTAGTCCCTACACA 58.924 40.000 0.00 0.00 44.50 3.72
42 43 6.593268 AGAGACTTTTTCTAGTCCCTACAC 57.407 41.667 0.00 0.00 44.50 2.90
43 44 7.613551 AAAGAGACTTTTTCTAGTCCCTACA 57.386 36.000 0.00 0.00 44.50 2.74
44 45 9.993454 TTAAAAGAGACTTTTTCTAGTCCCTAC 57.007 33.333 13.33 0.00 44.50 3.18
46 47 9.562408 CTTTAAAAGAGACTTTTTCTAGTCCCT 57.438 33.333 13.33 0.00 44.50 4.20
47 48 9.557061 TCTTTAAAAGAGACTTTTTCTAGTCCC 57.443 33.333 13.33 0.00 44.50 4.46
76 77 6.658188 AAAGTCCATCCCGTTTGATAAAAA 57.342 33.333 0.00 0.00 0.00 1.94
77 78 6.658188 AAAAGTCCATCCCGTTTGATAAAA 57.342 33.333 0.00 0.00 0.00 1.52
78 79 6.658188 AAAAAGTCCATCCCGTTTGATAAA 57.342 33.333 0.00 0.00 0.00 1.40
79 80 6.376018 CCTAAAAAGTCCATCCCGTTTGATAA 59.624 38.462 0.00 0.00 0.00 1.75
80 81 5.883673 CCTAAAAAGTCCATCCCGTTTGATA 59.116 40.000 0.00 0.00 0.00 2.15
81 82 4.705023 CCTAAAAAGTCCATCCCGTTTGAT 59.295 41.667 0.00 0.00 0.00 2.57
82 83 4.076394 CCTAAAAAGTCCATCCCGTTTGA 58.924 43.478 0.00 0.00 0.00 2.69
83 84 3.192633 CCCTAAAAAGTCCATCCCGTTTG 59.807 47.826 0.00 0.00 0.00 2.93
84 85 3.074836 TCCCTAAAAAGTCCATCCCGTTT 59.925 43.478 0.00 0.00 0.00 3.60
85 86 2.645797 TCCCTAAAAAGTCCATCCCGTT 59.354 45.455 0.00 0.00 0.00 4.44
86 87 2.026542 GTCCCTAAAAAGTCCATCCCGT 60.027 50.000 0.00 0.00 0.00 5.28
87 88 2.238898 AGTCCCTAAAAAGTCCATCCCG 59.761 50.000 0.00 0.00 0.00 5.14
88 89 5.446260 TTAGTCCCTAAAAAGTCCATCCC 57.554 43.478 0.00 0.00 0.00 3.85
89 90 6.482524 AGTTTAGTCCCTAAAAAGTCCATCC 58.517 40.000 0.00 0.00 37.62 3.51
90 91 7.769507 CCTAGTTTAGTCCCTAAAAAGTCCATC 59.230 40.741 0.00 0.00 37.62 3.51
91 92 7.631007 CCTAGTTTAGTCCCTAAAAAGTCCAT 58.369 38.462 0.00 0.00 37.62 3.41
92 93 6.521255 GCCTAGTTTAGTCCCTAAAAAGTCCA 60.521 42.308 0.00 0.00 37.62 4.02
93 94 5.879223 GCCTAGTTTAGTCCCTAAAAAGTCC 59.121 44.000 0.00 0.00 37.62 3.85
94 95 6.470278 TGCCTAGTTTAGTCCCTAAAAAGTC 58.530 40.000 0.00 0.00 37.62 3.01
95 96 6.443995 TGCCTAGTTTAGTCCCTAAAAAGT 57.556 37.500 0.00 0.00 37.62 2.66
96 97 7.939784 AATGCCTAGTTTAGTCCCTAAAAAG 57.060 36.000 0.00 0.88 37.62 2.27
97 98 7.177744 CCAAATGCCTAGTTTAGTCCCTAAAAA 59.822 37.037 0.00 0.00 37.62 1.94
98 99 6.661805 CCAAATGCCTAGTTTAGTCCCTAAAA 59.338 38.462 0.00 0.00 37.62 1.52
99 100 6.012333 TCCAAATGCCTAGTTTAGTCCCTAAA 60.012 38.462 0.00 0.00 34.12 1.85
100 101 5.489637 TCCAAATGCCTAGTTTAGTCCCTAA 59.510 40.000 0.00 0.00 0.00 2.69
101 102 5.034200 TCCAAATGCCTAGTTTAGTCCCTA 58.966 41.667 0.00 0.00 0.00 3.53
102 103 3.850173 TCCAAATGCCTAGTTTAGTCCCT 59.150 43.478 0.00 0.00 0.00 4.20
103 104 3.945921 GTCCAAATGCCTAGTTTAGTCCC 59.054 47.826 0.00 0.00 0.00 4.46
104 105 4.844884 AGTCCAAATGCCTAGTTTAGTCC 58.155 43.478 0.00 0.00 0.00 3.85
105 106 7.916914 TTTAGTCCAAATGCCTAGTTTAGTC 57.083 36.000 0.00 0.00 0.00 2.59
106 107 8.281212 CATTTAGTCCAAATGCCTAGTTTAGT 57.719 34.615 0.00 0.00 45.19 2.24
117 118 8.663911 GAGAGTCTTCTTCATTTAGTCCAAATG 58.336 37.037 0.00 3.81 43.00 2.32
118 119 8.378565 TGAGAGTCTTCTTCATTTAGTCCAAAT 58.621 33.333 0.00 0.00 33.62 2.32
119 120 7.735917 TGAGAGTCTTCTTCATTTAGTCCAAA 58.264 34.615 0.00 0.00 32.53 3.28
120 121 7.303182 TGAGAGTCTTCTTCATTTAGTCCAA 57.697 36.000 0.00 0.00 32.53 3.53
121 122 6.918067 TGAGAGTCTTCTTCATTTAGTCCA 57.082 37.500 0.00 0.00 32.53 4.02
122 123 8.037758 TCATTGAGAGTCTTCTTCATTTAGTCC 58.962 37.037 0.00 0.00 32.53 3.85
123 124 8.994429 TCATTGAGAGTCTTCTTCATTTAGTC 57.006 34.615 0.00 0.00 32.53 2.59
124 125 8.811017 TCTCATTGAGAGTCTTCTTCATTTAGT 58.189 33.333 12.38 0.00 44.98 2.24
154 155 5.810095 ACATTGTTGGAAAAGTCCCAAAAA 58.190 33.333 0.00 0.00 44.41 1.94
155 156 5.423886 GACATTGTTGGAAAAGTCCCAAAA 58.576 37.500 0.00 0.00 44.41 2.44
156 157 4.141824 GGACATTGTTGGAAAAGTCCCAAA 60.142 41.667 0.00 0.00 44.41 3.28
157 158 3.386402 GGACATTGTTGGAAAAGTCCCAA 59.614 43.478 0.00 0.00 44.23 4.12
158 159 2.962421 GGACATTGTTGGAAAAGTCCCA 59.038 45.455 0.00 0.00 44.23 4.37
159 160 3.660501 GGACATTGTTGGAAAAGTCCC 57.339 47.619 0.00 0.00 44.23 4.46
160 161 3.230976 AGGGACATTGTTGGAAAAGTCC 58.769 45.455 0.00 0.00 45.21 3.85
161 162 3.255888 GGAGGGACATTGTTGGAAAAGTC 59.744 47.826 0.00 0.00 0.00 3.01
162 163 3.230976 GGAGGGACATTGTTGGAAAAGT 58.769 45.455 0.00 0.00 0.00 2.66
163 164 3.230134 TGGAGGGACATTGTTGGAAAAG 58.770 45.455 0.00 0.00 0.00 2.27
164 165 3.320610 TGGAGGGACATTGTTGGAAAA 57.679 42.857 0.00 0.00 0.00 2.29
165 166 3.164268 CATGGAGGGACATTGTTGGAAA 58.836 45.455 0.00 0.00 0.00 3.13
166 167 2.806434 CATGGAGGGACATTGTTGGAA 58.194 47.619 0.00 0.00 0.00 3.53
167 168 1.616725 GCATGGAGGGACATTGTTGGA 60.617 52.381 0.00 0.00 0.00 3.53
168 169 0.819582 GCATGGAGGGACATTGTTGG 59.180 55.000 0.00 0.00 0.00 3.77
169 170 1.203052 GTGCATGGAGGGACATTGTTG 59.797 52.381 0.00 0.00 0.00 3.33
170 171 1.549203 GTGCATGGAGGGACATTGTT 58.451 50.000 0.00 0.00 0.00 2.83
171 172 0.323725 GGTGCATGGAGGGACATTGT 60.324 55.000 0.00 0.00 0.00 2.71
172 173 1.039233 GGGTGCATGGAGGGACATTG 61.039 60.000 0.00 0.00 0.00 2.82
173 174 1.307647 GGGTGCATGGAGGGACATT 59.692 57.895 0.00 0.00 0.00 2.71
174 175 1.291459 ATGGGTGCATGGAGGGACAT 61.291 55.000 0.00 0.00 0.00 3.06
175 176 1.508667 AATGGGTGCATGGAGGGACA 61.509 55.000 0.00 0.00 0.00 4.02
176 177 1.039233 CAATGGGTGCATGGAGGGAC 61.039 60.000 0.00 0.00 0.00 4.46
177 178 1.307309 CAATGGGTGCATGGAGGGA 59.693 57.895 0.00 0.00 0.00 4.20
178 179 1.759299 CCAATGGGTGCATGGAGGG 60.759 63.158 0.00 0.00 36.27 4.30
179 180 2.428925 GCCAATGGGTGCATGGAGG 61.429 63.158 7.48 0.00 36.27 4.30
180 181 2.428925 GGCCAATGGGTGCATGGAG 61.429 63.158 7.48 0.00 36.27 3.86
181 182 2.364056 GGCCAATGGGTGCATGGA 60.364 61.111 7.48 0.00 36.27 3.41
182 183 3.472726 GGGCCAATGGGTGCATGG 61.473 66.667 4.39 0.00 37.29 3.66
183 184 3.840594 CGGGCCAATGGGTGCATG 61.841 66.667 4.39 0.00 36.17 4.06
202 203 4.247258 CAATCAAACAACACCATGGGATG 58.753 43.478 18.09 13.89 0.00 3.51
203 204 3.903090 ACAATCAAACAACACCATGGGAT 59.097 39.130 18.09 3.27 0.00 3.85
204 205 3.303938 ACAATCAAACAACACCATGGGA 58.696 40.909 18.09 0.60 0.00 4.37
205 206 3.749665 ACAATCAAACAACACCATGGG 57.250 42.857 18.09 7.72 0.00 4.00
206 207 7.727331 AAATAACAATCAAACAACACCATGG 57.273 32.000 11.19 11.19 0.00 3.66
207 208 9.649024 GAAAAATAACAATCAAACAACACCATG 57.351 29.630 0.00 0.00 0.00 3.66
208 209 9.612066 AGAAAAATAACAATCAAACAACACCAT 57.388 25.926 0.00 0.00 0.00 3.55
230 231 9.982651 GACCATGTTGCTTCTAGTATATAGAAA 57.017 33.333 0.00 0.00 33.67 2.52
231 232 9.143155 TGACCATGTTGCTTCTAGTATATAGAA 57.857 33.333 0.00 0.00 33.10 2.10
232 233 8.706322 TGACCATGTTGCTTCTAGTATATAGA 57.294 34.615 0.00 0.00 0.00 1.98
233 234 9.935241 AATGACCATGTTGCTTCTAGTATATAG 57.065 33.333 0.00 0.00 0.00 1.31
237 238 9.632638 ATTAAATGACCATGTTGCTTCTAGTAT 57.367 29.630 0.00 0.00 0.00 2.12
239 240 7.944729 ATTAAATGACCATGTTGCTTCTAGT 57.055 32.000 0.00 0.00 0.00 2.57
240 241 9.722056 GTTATTAAATGACCATGTTGCTTCTAG 57.278 33.333 0.00 0.00 0.00 2.43
241 242 8.682710 GGTTATTAAATGACCATGTTGCTTCTA 58.317 33.333 0.00 0.00 38.68 2.10
242 243 7.397192 AGGTTATTAAATGACCATGTTGCTTCT 59.603 33.333 6.26 0.00 41.10 2.85
243 244 7.547227 AGGTTATTAAATGACCATGTTGCTTC 58.453 34.615 6.26 0.00 41.10 3.86
244 245 7.397192 AGAGGTTATTAAATGACCATGTTGCTT 59.603 33.333 6.26 0.00 41.10 3.91
245 246 6.891908 AGAGGTTATTAAATGACCATGTTGCT 59.108 34.615 6.26 0.00 41.10 3.91
246 247 7.100458 AGAGGTTATTAAATGACCATGTTGC 57.900 36.000 6.26 0.00 41.10 4.17
247 248 9.613428 TCTAGAGGTTATTAAATGACCATGTTG 57.387 33.333 6.26 0.00 41.10 3.33
251 252 9.853177 CCTTTCTAGAGGTTATTAAATGACCAT 57.147 33.333 6.26 0.00 41.10 3.55
252 253 8.272173 CCCTTTCTAGAGGTTATTAAATGACCA 58.728 37.037 6.26 0.00 41.10 4.02
253 254 8.491958 TCCCTTTCTAGAGGTTATTAAATGACC 58.508 37.037 0.00 0.00 39.09 4.02
254 255 9.327628 GTCCCTTTCTAGAGGTTATTAAATGAC 57.672 37.037 0.00 0.00 34.88 3.06
255 256 9.280456 AGTCCCTTTCTAGAGGTTATTAAATGA 57.720 33.333 0.00 0.00 34.88 2.57
258 259 9.210228 CCTAGTCCCTTTCTAGAGGTTATTAAA 57.790 37.037 0.00 0.00 37.62 1.52
259 260 7.788385 CCCTAGTCCCTTTCTAGAGGTTATTAA 59.212 40.741 0.00 0.00 37.62 1.40
260 261 7.131542 TCCCTAGTCCCTTTCTAGAGGTTATTA 59.868 40.741 0.00 0.00 37.62 0.98
261 262 6.067781 TCCCTAGTCCCTTTCTAGAGGTTATT 60.068 42.308 0.00 0.00 37.62 1.40
262 263 5.439059 TCCCTAGTCCCTTTCTAGAGGTTAT 59.561 44.000 0.00 0.00 37.62 1.89
263 264 4.797919 TCCCTAGTCCCTTTCTAGAGGTTA 59.202 45.833 0.00 0.00 37.62 2.85
264 265 3.601537 TCCCTAGTCCCTTTCTAGAGGTT 59.398 47.826 0.00 0.00 37.62 3.50
265 266 3.052717 GTCCCTAGTCCCTTTCTAGAGGT 60.053 52.174 0.00 0.00 37.62 3.85
266 267 3.205733 AGTCCCTAGTCCCTTTCTAGAGG 59.794 52.174 0.00 0.00 37.62 3.69
267 268 4.529716 AGTCCCTAGTCCCTTTCTAGAG 57.470 50.000 0.00 0.00 37.62 2.43
268 269 4.969136 AAGTCCCTAGTCCCTTTCTAGA 57.031 45.455 0.00 0.00 37.62 2.43
269 270 6.375830 AAAAAGTCCCTAGTCCCTTTCTAG 57.624 41.667 0.00 0.00 35.86 2.43
270 271 7.021251 ACTAAAAAGTCCCTAGTCCCTTTCTA 58.979 38.462 0.00 0.00 0.00 2.10
271 272 5.850583 ACTAAAAAGTCCCTAGTCCCTTTCT 59.149 40.000 0.00 0.00 0.00 2.52
272 273 6.013553 AGACTAAAAAGTCCCTAGTCCCTTTC 60.014 42.308 2.00 0.00 41.59 2.62
273 274 5.850583 AGACTAAAAAGTCCCTAGTCCCTTT 59.149 40.000 2.00 0.00 41.59 3.11
274 275 5.413277 AGACTAAAAAGTCCCTAGTCCCTT 58.587 41.667 2.00 0.00 41.59 3.95
275 276 5.024785 GAGACTAAAAAGTCCCTAGTCCCT 58.975 45.833 2.00 0.00 41.59 4.20
276 277 5.024785 AGAGACTAAAAAGTCCCTAGTCCC 58.975 45.833 2.00 0.00 41.59 4.46
277 278 5.105269 CCAGAGACTAAAAAGTCCCTAGTCC 60.105 48.000 2.00 0.00 41.59 3.85
278 279 5.715753 TCCAGAGACTAAAAAGTCCCTAGTC 59.284 44.000 2.00 0.00 41.17 2.59
279 280 5.652324 TCCAGAGACTAAAAAGTCCCTAGT 58.348 41.667 2.00 0.00 39.50 2.57
280 281 6.607004 TTCCAGAGACTAAAAAGTCCCTAG 57.393 41.667 2.00 0.00 39.50 3.02
281 282 6.328148 TGTTTCCAGAGACTAAAAAGTCCCTA 59.672 38.462 2.00 0.00 39.50 3.53
282 283 5.132144 TGTTTCCAGAGACTAAAAAGTCCCT 59.868 40.000 2.00 0.00 39.50 4.20
283 284 5.374071 TGTTTCCAGAGACTAAAAAGTCCC 58.626 41.667 2.00 0.00 39.50 4.46
284 285 6.937436 TTGTTTCCAGAGACTAAAAAGTCC 57.063 37.500 2.00 0.00 39.50 3.85
285 286 7.910683 CAGTTTGTTTCCAGAGACTAAAAAGTC 59.089 37.037 0.00 0.00 39.00 3.01
286 287 7.148069 CCAGTTTGTTTCCAGAGACTAAAAAGT 60.148 37.037 0.00 0.00 0.00 2.66
287 288 7.196331 CCAGTTTGTTTCCAGAGACTAAAAAG 58.804 38.462 0.00 0.00 0.00 2.27
288 289 6.096282 CCCAGTTTGTTTCCAGAGACTAAAAA 59.904 38.462 0.00 0.00 0.00 1.94
289 290 5.592688 CCCAGTTTGTTTCCAGAGACTAAAA 59.407 40.000 0.00 0.00 0.00 1.52
290 291 5.104277 TCCCAGTTTGTTTCCAGAGACTAAA 60.104 40.000 0.00 0.00 0.00 1.85
291 292 4.410883 TCCCAGTTTGTTTCCAGAGACTAA 59.589 41.667 0.00 0.00 0.00 2.24
292 293 3.971305 TCCCAGTTTGTTTCCAGAGACTA 59.029 43.478 0.00 0.00 0.00 2.59
293 294 2.777692 TCCCAGTTTGTTTCCAGAGACT 59.222 45.455 0.00 0.00 0.00 3.24
294 295 3.208747 TCCCAGTTTGTTTCCAGAGAC 57.791 47.619 0.00 0.00 0.00 3.36
295 296 3.435026 CCTTCCCAGTTTGTTTCCAGAGA 60.435 47.826 0.00 0.00 0.00 3.10
296 297 2.887152 CCTTCCCAGTTTGTTTCCAGAG 59.113 50.000 0.00 0.00 0.00 3.35
297 298 2.512056 TCCTTCCCAGTTTGTTTCCAGA 59.488 45.455 0.00 0.00 0.00 3.86
298 299 2.623416 GTCCTTCCCAGTTTGTTTCCAG 59.377 50.000 0.00 0.00 0.00 3.86
299 300 2.243736 AGTCCTTCCCAGTTTGTTTCCA 59.756 45.455 0.00 0.00 0.00 3.53
300 301 2.945456 AGTCCTTCCCAGTTTGTTTCC 58.055 47.619 0.00 0.00 0.00 3.13
301 302 5.339008 AAAAGTCCTTCCCAGTTTGTTTC 57.661 39.130 0.00 0.00 0.00 2.78
302 303 5.362717 CCTAAAAGTCCTTCCCAGTTTGTTT 59.637 40.000 0.00 0.00 0.00 2.83
303 304 4.893524 CCTAAAAGTCCTTCCCAGTTTGTT 59.106 41.667 0.00 0.00 0.00 2.83
304 305 4.470602 CCTAAAAGTCCTTCCCAGTTTGT 58.529 43.478 0.00 0.00 0.00 2.83
305 306 3.826729 CCCTAAAAGTCCTTCCCAGTTTG 59.173 47.826 0.00 0.00 0.00 2.93
306 307 3.754172 GCCCTAAAAGTCCTTCCCAGTTT 60.754 47.826 0.00 0.00 0.00 2.66
307 308 2.225041 GCCCTAAAAGTCCTTCCCAGTT 60.225 50.000 0.00 0.00 0.00 3.16
308 309 1.354705 GCCCTAAAAGTCCTTCCCAGT 59.645 52.381 0.00 0.00 0.00 4.00
309 310 1.354368 TGCCCTAAAAGTCCTTCCCAG 59.646 52.381 0.00 0.00 0.00 4.45
310 311 1.451449 TGCCCTAAAAGTCCTTCCCA 58.549 50.000 0.00 0.00 0.00 4.37
311 312 2.291605 ACATGCCCTAAAAGTCCTTCCC 60.292 50.000 0.00 0.00 0.00 3.97
312 313 3.087370 ACATGCCCTAAAAGTCCTTCC 57.913 47.619 0.00 0.00 0.00 3.46
313 314 4.585879 TGTACATGCCCTAAAAGTCCTTC 58.414 43.478 0.00 0.00 0.00 3.46
314 315 4.650972 TGTACATGCCCTAAAAGTCCTT 57.349 40.909 0.00 0.00 0.00 3.36
315 316 4.650972 TTGTACATGCCCTAAAAGTCCT 57.349 40.909 0.00 0.00 0.00 3.85
316 317 4.440112 GCATTGTACATGCCCTAAAAGTCC 60.440 45.833 15.31 0.00 39.01 3.85
317 318 4.672409 GCATTGTACATGCCCTAAAAGTC 58.328 43.478 15.31 0.00 39.01 3.01
318 319 4.718940 GCATTGTACATGCCCTAAAAGT 57.281 40.909 15.31 0.00 39.01 2.66
327 328 0.991344 GCGTTTGGCATTGTACATGC 59.009 50.000 17.01 17.01 43.85 4.06
338 339 3.329114 GCCTATTCAAGCGTTTGGC 57.671 52.632 12.29 3.34 44.05 4.52
345 346 1.230324 CCCTAAGCGCCTATTCAAGC 58.770 55.000 2.29 0.00 0.00 4.01
346 347 1.416401 TCCCCTAAGCGCCTATTCAAG 59.584 52.381 2.29 0.00 0.00 3.02
347 348 1.502690 TCCCCTAAGCGCCTATTCAA 58.497 50.000 2.29 0.00 0.00 2.69
348 349 1.416401 CTTCCCCTAAGCGCCTATTCA 59.584 52.381 2.29 0.00 0.00 2.57
349 350 1.270893 CCTTCCCCTAAGCGCCTATTC 60.271 57.143 2.29 0.00 33.49 1.75
350 351 0.765510 CCTTCCCCTAAGCGCCTATT 59.234 55.000 2.29 0.00 33.49 1.73
351 352 0.105142 TCCTTCCCCTAAGCGCCTAT 60.105 55.000 2.29 0.00 33.49 2.57
352 353 0.105142 ATCCTTCCCCTAAGCGCCTA 60.105 55.000 2.29 0.00 33.49 3.93
353 354 0.988678 AATCCTTCCCCTAAGCGCCT 60.989 55.000 2.29 0.00 33.49 5.52
354 355 0.106669 AAATCCTTCCCCTAAGCGCC 60.107 55.000 2.29 0.00 33.49 6.53
355 356 1.763968 AAAATCCTTCCCCTAAGCGC 58.236 50.000 0.00 0.00 33.49 5.92
356 357 2.427095 CCAAAAATCCTTCCCCTAAGCG 59.573 50.000 0.00 0.00 33.49 4.68
357 358 2.168521 GCCAAAAATCCTTCCCCTAAGC 59.831 50.000 0.00 0.00 33.49 3.09
358 359 3.713003 AGCCAAAAATCCTTCCCCTAAG 58.287 45.455 0.00 0.00 34.73 2.18
359 360 3.845109 AGCCAAAAATCCTTCCCCTAA 57.155 42.857 0.00 0.00 0.00 2.69
360 361 4.867086 CTTAGCCAAAAATCCTTCCCCTA 58.133 43.478 0.00 0.00 0.00 3.53
361 362 3.713003 CTTAGCCAAAAATCCTTCCCCT 58.287 45.455 0.00 0.00 0.00 4.79
362 363 2.168521 GCTTAGCCAAAAATCCTTCCCC 59.831 50.000 0.00 0.00 0.00 4.81
363 364 2.159240 CGCTTAGCCAAAAATCCTTCCC 60.159 50.000 0.00 0.00 0.00 3.97
364 365 2.492088 ACGCTTAGCCAAAAATCCTTCC 59.508 45.455 0.00 0.00 0.00 3.46
365 366 3.850122 ACGCTTAGCCAAAAATCCTTC 57.150 42.857 0.00 0.00 0.00 3.46
366 367 3.365969 CGAACGCTTAGCCAAAAATCCTT 60.366 43.478 0.00 0.00 0.00 3.36
367 368 2.161609 CGAACGCTTAGCCAAAAATCCT 59.838 45.455 0.00 0.00 0.00 3.24
368 369 2.095415 ACGAACGCTTAGCCAAAAATCC 60.095 45.455 0.00 0.00 0.00 3.01
369 370 2.908626 CACGAACGCTTAGCCAAAAATC 59.091 45.455 0.00 0.00 0.00 2.17
370 371 2.292292 ACACGAACGCTTAGCCAAAAAT 59.708 40.909 0.00 0.00 0.00 1.82
371 372 1.671845 ACACGAACGCTTAGCCAAAAA 59.328 42.857 0.00 0.00 0.00 1.94
372 373 1.301423 ACACGAACGCTTAGCCAAAA 58.699 45.000 0.00 0.00 0.00 2.44
373 374 1.301423 AACACGAACGCTTAGCCAAA 58.699 45.000 0.00 0.00 0.00 3.28
374 375 2.063266 CTAACACGAACGCTTAGCCAA 58.937 47.619 0.00 0.00 0.00 4.52
375 376 1.270274 TCTAACACGAACGCTTAGCCA 59.730 47.619 0.00 0.00 0.00 4.75
376 377 1.986698 TCTAACACGAACGCTTAGCC 58.013 50.000 0.00 0.00 0.00 3.93
377 378 3.858238 AGATTCTAACACGAACGCTTAGC 59.142 43.478 0.00 0.00 0.00 3.09
378 379 4.259451 GCAGATTCTAACACGAACGCTTAG 60.259 45.833 0.00 0.00 0.00 2.18
379 380 3.611113 GCAGATTCTAACACGAACGCTTA 59.389 43.478 0.00 0.00 0.00 3.09
380 381 2.412089 GCAGATTCTAACACGAACGCTT 59.588 45.455 0.00 0.00 0.00 4.68
381 382 1.993370 GCAGATTCTAACACGAACGCT 59.007 47.619 0.00 0.00 0.00 5.07
382 383 1.060698 GGCAGATTCTAACACGAACGC 59.939 52.381 0.00 0.00 0.00 4.84
383 384 2.599082 GAGGCAGATTCTAACACGAACG 59.401 50.000 0.00 0.00 0.00 3.95
384 385 3.851098 AGAGGCAGATTCTAACACGAAC 58.149 45.455 0.00 0.00 0.00 3.95
385 386 3.119101 GGAGAGGCAGATTCTAACACGAA 60.119 47.826 0.00 0.00 0.00 3.85
386 387 2.427453 GGAGAGGCAGATTCTAACACGA 59.573 50.000 0.00 0.00 0.00 4.35
387 388 2.166459 TGGAGAGGCAGATTCTAACACG 59.834 50.000 0.00 0.00 0.00 4.49
388 389 3.895232 TGGAGAGGCAGATTCTAACAC 57.105 47.619 0.00 0.00 0.00 3.32
389 390 3.368427 CGTTGGAGAGGCAGATTCTAACA 60.368 47.826 0.00 0.00 33.51 2.41
390 391 3.190874 CGTTGGAGAGGCAGATTCTAAC 58.809 50.000 0.00 0.00 0.00 2.34
391 392 2.418746 GCGTTGGAGAGGCAGATTCTAA 60.419 50.000 0.00 0.00 38.95 2.10
392 393 1.137086 GCGTTGGAGAGGCAGATTCTA 59.863 52.381 0.00 0.00 38.95 2.10
393 394 0.107945 GCGTTGGAGAGGCAGATTCT 60.108 55.000 0.00 0.00 38.95 2.40
394 395 0.107945 AGCGTTGGAGAGGCAGATTC 60.108 55.000 0.00 0.00 41.53 2.52
395 396 1.195115 TAGCGTTGGAGAGGCAGATT 58.805 50.000 0.00 0.00 41.53 2.40
396 397 1.134670 GTTAGCGTTGGAGAGGCAGAT 60.135 52.381 0.00 0.00 41.53 2.90
397 398 0.246635 GTTAGCGTTGGAGAGGCAGA 59.753 55.000 0.00 0.00 41.53 4.26
398 399 0.247736 AGTTAGCGTTGGAGAGGCAG 59.752 55.000 0.00 0.00 41.53 4.85
399 400 0.037326 CAGTTAGCGTTGGAGAGGCA 60.037 55.000 0.00 0.00 41.53 4.75
400 401 0.741221 CCAGTTAGCGTTGGAGAGGC 60.741 60.000 0.00 0.00 36.55 4.70
401 402 0.895530 TCCAGTTAGCGTTGGAGAGG 59.104 55.000 0.00 0.00 38.53 3.69
402 403 2.743636 TTCCAGTTAGCGTTGGAGAG 57.256 50.000 2.64 0.00 43.89 3.20
403 404 3.399330 CTTTTCCAGTTAGCGTTGGAGA 58.601 45.455 2.64 0.00 43.89 3.71
404 405 2.484264 CCTTTTCCAGTTAGCGTTGGAG 59.516 50.000 2.64 0.00 43.89 3.86
405 406 2.105134 TCCTTTTCCAGTTAGCGTTGGA 59.895 45.455 0.00 0.00 41.59 3.53
406 407 2.225727 GTCCTTTTCCAGTTAGCGTTGG 59.774 50.000 0.00 0.00 35.74 3.77
407 408 2.875933 TGTCCTTTTCCAGTTAGCGTTG 59.124 45.455 0.00 0.00 0.00 4.10
408 409 3.139077 CTGTCCTTTTCCAGTTAGCGTT 58.861 45.455 0.00 0.00 0.00 4.84
409 410 2.367567 TCTGTCCTTTTCCAGTTAGCGT 59.632 45.455 0.00 0.00 0.00 5.07
410 411 2.737252 GTCTGTCCTTTTCCAGTTAGCG 59.263 50.000 0.00 0.00 0.00 4.26
411 412 2.737252 CGTCTGTCCTTTTCCAGTTAGC 59.263 50.000 0.00 0.00 0.00 3.09
412 413 2.737252 GCGTCTGTCCTTTTCCAGTTAG 59.263 50.000 0.00 0.00 0.00 2.34
413 414 2.367567 AGCGTCTGTCCTTTTCCAGTTA 59.632 45.455 0.00 0.00 0.00 2.24
414 415 1.141053 AGCGTCTGTCCTTTTCCAGTT 59.859 47.619 0.00 0.00 0.00 3.16
415 416 0.759346 AGCGTCTGTCCTTTTCCAGT 59.241 50.000 0.00 0.00 0.00 4.00
416 417 2.338500 GTAGCGTCTGTCCTTTTCCAG 58.662 52.381 0.00 0.00 0.00 3.86
417 418 1.336517 CGTAGCGTCTGTCCTTTTCCA 60.337 52.381 0.00 0.00 0.00 3.53
418 419 1.347320 CGTAGCGTCTGTCCTTTTCC 58.653 55.000 0.00 0.00 0.00 3.13
433 434 9.314501 GTTCTGTTTTATTTTGAACTAGCGTAG 57.685 33.333 0.00 0.00 35.51 3.51
434 435 8.005466 CGTTCTGTTTTATTTTGAACTAGCGTA 58.995 33.333 0.00 0.00 36.03 4.42
435 436 6.849305 CGTTCTGTTTTATTTTGAACTAGCGT 59.151 34.615 0.00 0.00 36.03 5.07
436 437 6.302313 CCGTTCTGTTTTATTTTGAACTAGCG 59.698 38.462 0.00 0.00 36.03 4.26
437 438 6.087687 GCCGTTCTGTTTTATTTTGAACTAGC 59.912 38.462 0.00 0.00 36.03 3.42
438 439 6.302313 CGCCGTTCTGTTTTATTTTGAACTAG 59.698 38.462 0.00 0.00 36.03 2.57
439 440 6.018098 TCGCCGTTCTGTTTTATTTTGAACTA 60.018 34.615 0.00 0.00 36.03 2.24
440 441 4.973663 CGCCGTTCTGTTTTATTTTGAACT 59.026 37.500 0.00 0.00 36.03 3.01
441 442 4.971220 TCGCCGTTCTGTTTTATTTTGAAC 59.029 37.500 0.00 0.00 35.17 3.18
442 443 4.971220 GTCGCCGTTCTGTTTTATTTTGAA 59.029 37.500 0.00 0.00 0.00 2.69
443 444 4.529446 GTCGCCGTTCTGTTTTATTTTGA 58.471 39.130 0.00 0.00 0.00 2.69
444 445 3.356658 CGTCGCCGTTCTGTTTTATTTTG 59.643 43.478 0.00 0.00 0.00 2.44
445 446 3.248125 TCGTCGCCGTTCTGTTTTATTTT 59.752 39.130 0.00 0.00 35.01 1.82
446 447 2.801679 TCGTCGCCGTTCTGTTTTATTT 59.198 40.909 0.00 0.00 35.01 1.40
447 448 2.406130 TCGTCGCCGTTCTGTTTTATT 58.594 42.857 0.00 0.00 35.01 1.40
448 449 1.990563 CTCGTCGCCGTTCTGTTTTAT 59.009 47.619 0.00 0.00 35.01 1.40
449 450 1.001487 TCTCGTCGCCGTTCTGTTTTA 60.001 47.619 0.00 0.00 35.01 1.52
450 451 0.249155 TCTCGTCGCCGTTCTGTTTT 60.249 50.000 0.00 0.00 35.01 2.43
451 452 0.249155 TTCTCGTCGCCGTTCTGTTT 60.249 50.000 0.00 0.00 35.01 2.83
452 453 0.249155 TTTCTCGTCGCCGTTCTGTT 60.249 50.000 0.00 0.00 35.01 3.16
453 454 0.249155 TTTTCTCGTCGCCGTTCTGT 60.249 50.000 0.00 0.00 35.01 3.41
454 455 0.856641 TTTTTCTCGTCGCCGTTCTG 59.143 50.000 0.00 0.00 35.01 3.02
455 456 1.137513 CTTTTTCTCGTCGCCGTTCT 58.862 50.000 0.00 0.00 35.01 3.01
456 457 0.450645 GCTTTTTCTCGTCGCCGTTC 60.451 55.000 0.00 0.00 35.01 3.95
457 458 0.878961 AGCTTTTTCTCGTCGCCGTT 60.879 50.000 0.00 0.00 35.01 4.44
458 459 1.300697 AGCTTTTTCTCGTCGCCGT 60.301 52.632 0.00 0.00 35.01 5.68
459 460 1.130613 CAGCTTTTTCTCGTCGCCG 59.869 57.895 0.00 0.00 0.00 6.46
460 461 1.497722 CCAGCTTTTTCTCGTCGCC 59.502 57.895 0.00 0.00 0.00 5.54
461 462 1.497722 CCCAGCTTTTTCTCGTCGC 59.502 57.895 0.00 0.00 0.00 5.19
462 463 1.912371 GCCCCAGCTTTTTCTCGTCG 61.912 60.000 0.00 0.00 35.50 5.12
463 464 1.876664 GCCCCAGCTTTTTCTCGTC 59.123 57.895 0.00 0.00 35.50 4.20
464 465 1.966451 CGCCCCAGCTTTTTCTCGT 60.966 57.895 0.00 0.00 36.60 4.18
465 466 2.870372 CGCCCCAGCTTTTTCTCG 59.130 61.111 0.00 0.00 36.60 4.04
466 467 1.973812 AGCGCCCCAGCTTTTTCTC 60.974 57.895 2.29 0.00 46.80 2.87
467 468 2.116125 AGCGCCCCAGCTTTTTCT 59.884 55.556 2.29 0.00 46.80 2.52
482 483 1.274596 CGCAAAATCAGGCATCAAGC 58.725 50.000 0.00 0.00 44.65 4.01
483 484 1.274596 GCGCAAAATCAGGCATCAAG 58.725 50.000 0.30 0.00 0.00 3.02
484 485 0.108709 GGCGCAAAATCAGGCATCAA 60.109 50.000 10.83 0.00 0.00 2.57
485 486 1.512230 GGCGCAAAATCAGGCATCA 59.488 52.632 10.83 0.00 0.00 3.07
486 487 1.587088 CGGCGCAAAATCAGGCATC 60.587 57.895 10.83 0.00 0.00 3.91
487 488 2.491152 CGGCGCAAAATCAGGCAT 59.509 55.556 10.83 0.00 0.00 4.40
488 489 3.746889 CCGGCGCAAAATCAGGCA 61.747 61.111 10.83 0.00 0.00 4.75
490 491 4.834892 CGCCGGCGCAAAATCAGG 62.835 66.667 38.48 5.99 34.03 3.86
500 501 1.795962 CTTTTTGTTAGCGCCGGCG 60.796 57.895 43.13 43.13 46.35 6.46
501 502 0.728129 GACTTTTTGTTAGCGCCGGC 60.728 55.000 19.07 19.07 40.37 6.13
502 503 0.589223 TGACTTTTTGTTAGCGCCGG 59.411 50.000 2.29 0.00 0.00 6.13
503 504 1.529438 TCTGACTTTTTGTTAGCGCCG 59.471 47.619 2.29 0.00 32.94 6.46
504 505 3.619233 TTCTGACTTTTTGTTAGCGCC 57.381 42.857 2.29 0.00 32.94 6.53
505 506 5.107875 CCAAATTCTGACTTTTTGTTAGCGC 60.108 40.000 0.00 0.00 32.94 5.92
506 507 5.402270 CCCAAATTCTGACTTTTTGTTAGCG 59.598 40.000 0.00 0.00 32.94 4.26
507 508 6.200854 CACCCAAATTCTGACTTTTTGTTAGC 59.799 38.462 0.00 0.00 32.94 3.09
508 509 6.701400 CCACCCAAATTCTGACTTTTTGTTAG 59.299 38.462 0.00 0.00 34.04 2.34
509 510 6.407525 CCCACCCAAATTCTGACTTTTTGTTA 60.408 38.462 0.00 0.00 0.00 2.41
510 511 5.427378 CCACCCAAATTCTGACTTTTTGTT 58.573 37.500 0.00 0.00 0.00 2.83
511 512 4.141733 CCCACCCAAATTCTGACTTTTTGT 60.142 41.667 0.00 0.00 0.00 2.83
512 513 4.100808 TCCCACCCAAATTCTGACTTTTTG 59.899 41.667 0.00 0.00 0.00 2.44
513 514 4.294347 TCCCACCCAAATTCTGACTTTTT 58.706 39.130 0.00 0.00 0.00 1.94
514 515 3.922375 TCCCACCCAAATTCTGACTTTT 58.078 40.909 0.00 0.00 0.00 2.27
515 516 3.611025 TCCCACCCAAATTCTGACTTT 57.389 42.857 0.00 0.00 0.00 2.66
516 517 3.611025 TTCCCACCCAAATTCTGACTT 57.389 42.857 0.00 0.00 0.00 3.01
517 518 3.334881 AGATTCCCACCCAAATTCTGACT 59.665 43.478 0.00 0.00 0.00 3.41
518 519 3.445096 CAGATTCCCACCCAAATTCTGAC 59.555 47.826 0.00 0.00 0.00 3.51
519 520 3.333381 TCAGATTCCCACCCAAATTCTGA 59.667 43.478 0.00 0.00 0.00 3.27
520 521 3.700538 TCAGATTCCCACCCAAATTCTG 58.299 45.455 0.00 0.00 0.00 3.02
521 522 4.017222 TCATCAGATTCCCACCCAAATTCT 60.017 41.667 0.00 0.00 0.00 2.40
522 523 4.280819 TCATCAGATTCCCACCCAAATTC 58.719 43.478 0.00 0.00 0.00 2.17
523 524 4.335735 TCATCAGATTCCCACCCAAATT 57.664 40.909 0.00 0.00 0.00 1.82
524 525 4.335735 TTCATCAGATTCCCACCCAAAT 57.664 40.909 0.00 0.00 0.00 2.32
525 526 3.824001 TTCATCAGATTCCCACCCAAA 57.176 42.857 0.00 0.00 0.00 3.28
526 527 3.430453 GTTTCATCAGATTCCCACCCAA 58.570 45.455 0.00 0.00 0.00 4.12
527 528 2.617788 CGTTTCATCAGATTCCCACCCA 60.618 50.000 0.00 0.00 0.00 4.51
528 529 2.017049 CGTTTCATCAGATTCCCACCC 58.983 52.381 0.00 0.00 0.00 4.61
529 530 2.017049 CCGTTTCATCAGATTCCCACC 58.983 52.381 0.00 0.00 0.00 4.61
530 531 2.678336 GTCCGTTTCATCAGATTCCCAC 59.322 50.000 0.00 0.00 0.00 4.61
531 532 2.676750 CGTCCGTTTCATCAGATTCCCA 60.677 50.000 0.00 0.00 0.00 4.37
532 533 1.933853 CGTCCGTTTCATCAGATTCCC 59.066 52.381 0.00 0.00 0.00 3.97
533 534 1.933853 CCGTCCGTTTCATCAGATTCC 59.066 52.381 0.00 0.00 0.00 3.01
534 535 1.933853 CCCGTCCGTTTCATCAGATTC 59.066 52.381 0.00 0.00 0.00 2.52
535 536 1.553248 TCCCGTCCGTTTCATCAGATT 59.447 47.619 0.00 0.00 0.00 2.40
536 537 1.191535 TCCCGTCCGTTTCATCAGAT 58.808 50.000 0.00 0.00 0.00 2.90
537 538 1.191535 ATCCCGTCCGTTTCATCAGA 58.808 50.000 0.00 0.00 0.00 3.27
538 539 2.024176 AATCCCGTCCGTTTCATCAG 57.976 50.000 0.00 0.00 0.00 2.90
539 540 2.027561 AGAAATCCCGTCCGTTTCATCA 60.028 45.455 0.00 0.00 35.00 3.07
540 541 2.629051 AGAAATCCCGTCCGTTTCATC 58.371 47.619 0.00 0.00 35.00 2.92
541 542 2.781681 AGAAATCCCGTCCGTTTCAT 57.218 45.000 0.00 0.00 35.00 2.57
542 543 2.354003 GGTAGAAATCCCGTCCGTTTCA 60.354 50.000 0.00 0.00 35.00 2.69
543 544 2.274437 GGTAGAAATCCCGTCCGTTTC 58.726 52.381 0.00 0.00 33.24 2.78
544 545 1.065926 GGGTAGAAATCCCGTCCGTTT 60.066 52.381 0.00 0.00 35.27 3.60
545 546 0.538584 GGGTAGAAATCCCGTCCGTT 59.461 55.000 0.00 0.00 35.27 4.44
546 547 2.205691 GGGTAGAAATCCCGTCCGT 58.794 57.895 0.00 0.00 35.27 4.69
552 553 0.179054 GACGCCAGGGTAGAAATCCC 60.179 60.000 0.00 0.00 44.90 3.85
553 554 0.831307 AGACGCCAGGGTAGAAATCC 59.169 55.000 0.00 0.00 0.00 3.01
554 555 1.473434 CCAGACGCCAGGGTAGAAATC 60.473 57.143 0.00 0.00 0.00 2.17
555 556 0.541863 CCAGACGCCAGGGTAGAAAT 59.458 55.000 0.00 0.00 0.00 2.17
556 557 0.834687 ACCAGACGCCAGGGTAGAAA 60.835 55.000 0.00 0.00 31.89 2.52
557 558 0.040058 TACCAGACGCCAGGGTAGAA 59.960 55.000 0.00 0.00 36.14 2.10
558 559 0.682209 GTACCAGACGCCAGGGTAGA 60.682 60.000 0.00 0.00 37.82 2.59
559 560 0.683504 AGTACCAGACGCCAGGGTAG 60.684 60.000 0.00 0.00 37.82 3.18
560 561 0.625316 TAGTACCAGACGCCAGGGTA 59.375 55.000 0.00 0.00 36.14 3.69
561 562 0.683504 CTAGTACCAGACGCCAGGGT 60.684 60.000 0.00 0.00 38.70 4.34
562 563 2.017559 GCTAGTACCAGACGCCAGGG 62.018 65.000 0.00 0.00 0.00 4.45
563 564 1.437986 GCTAGTACCAGACGCCAGG 59.562 63.158 0.00 0.00 0.00 4.45
564 565 1.064296 CGCTAGTACCAGACGCCAG 59.936 63.158 0.00 0.00 0.00 4.85
565 566 3.060020 GCGCTAGTACCAGACGCCA 62.060 63.158 15.20 0.00 43.58 5.69
566 567 2.278661 GCGCTAGTACCAGACGCC 60.279 66.667 15.20 2.97 43.58 5.68
568 569 1.355916 GAGGCGCTAGTACCAGACG 59.644 63.158 7.64 0.00 0.00 4.18
569 570 0.752376 AGGAGGCGCTAGTACCAGAC 60.752 60.000 7.64 0.00 0.00 3.51
570 571 0.841961 TAGGAGGCGCTAGTACCAGA 59.158 55.000 7.64 0.00 0.00 3.86
571 572 1.912417 ATAGGAGGCGCTAGTACCAG 58.088 55.000 7.64 0.00 0.00 4.00
572 573 1.961394 CAATAGGAGGCGCTAGTACCA 59.039 52.381 7.64 0.00 0.00 3.25
573 574 1.272769 CCAATAGGAGGCGCTAGTACC 59.727 57.143 7.64 4.06 36.89 3.34
574 575 2.236766 TCCAATAGGAGGCGCTAGTAC 58.763 52.381 7.64 0.00 39.61 2.73
575 576 2.670019 TCCAATAGGAGGCGCTAGTA 57.330 50.000 7.64 0.00 39.61 1.82
576 577 3.533697 TCCAATAGGAGGCGCTAGT 57.466 52.632 7.64 0.00 39.61 2.57
585 586 2.439507 GTCCAAGGCATCTCCAATAGGA 59.560 50.000 0.00 0.00 43.21 2.94
586 587 2.441001 AGTCCAAGGCATCTCCAATAGG 59.559 50.000 0.00 0.00 37.29 2.57
587 588 3.853355 AGTCCAAGGCATCTCCAATAG 57.147 47.619 0.00 0.00 37.29 1.73
588 589 4.556697 TCTAGTCCAAGGCATCTCCAATA 58.443 43.478 0.00 0.00 37.29 1.90
589 590 3.387962 TCTAGTCCAAGGCATCTCCAAT 58.612 45.455 0.00 0.00 37.29 3.16
590 591 2.832838 TCTAGTCCAAGGCATCTCCAA 58.167 47.619 0.00 0.00 37.29 3.53
591 592 2.550277 TCTAGTCCAAGGCATCTCCA 57.450 50.000 0.00 0.00 37.29 3.86
592 593 3.198853 AGTTTCTAGTCCAAGGCATCTCC 59.801 47.826 0.00 0.00 0.00 3.71
593 594 4.479786 AGTTTCTAGTCCAAGGCATCTC 57.520 45.455 0.00 0.00 0.00 2.75
594 595 4.917906 AAGTTTCTAGTCCAAGGCATCT 57.082 40.909 0.00 0.00 0.00 2.90
595 596 5.966742 AAAAGTTTCTAGTCCAAGGCATC 57.033 39.130 0.00 0.00 0.00 3.91
596 597 6.434340 CCTAAAAAGTTTCTAGTCCAAGGCAT 59.566 38.462 0.00 0.00 0.00 4.40
597 598 5.768164 CCTAAAAAGTTTCTAGTCCAAGGCA 59.232 40.000 0.00 0.00 0.00 4.75
598 599 5.768662 ACCTAAAAAGTTTCTAGTCCAAGGC 59.231 40.000 0.00 0.00 0.00 4.35
599 600 6.996282 TCACCTAAAAAGTTTCTAGTCCAAGG 59.004 38.462 0.00 0.00 0.00 3.61
600 601 7.931948 TCTCACCTAAAAAGTTTCTAGTCCAAG 59.068 37.037 0.00 0.00 0.00 3.61
601 602 7.713942 GTCTCACCTAAAAAGTTTCTAGTCCAA 59.286 37.037 0.00 0.00 0.00 3.53
602 603 7.070821 AGTCTCACCTAAAAAGTTTCTAGTCCA 59.929 37.037 0.00 0.00 0.00 4.02
603 604 7.443477 AGTCTCACCTAAAAAGTTTCTAGTCC 58.557 38.462 0.00 0.00 0.00 3.85
604 605 9.628746 CTAGTCTCACCTAAAAAGTTTCTAGTC 57.371 37.037 0.00 0.00 0.00 2.59
605 606 9.364653 TCTAGTCTCACCTAAAAAGTTTCTAGT 57.635 33.333 0.00 0.00 0.00 2.57
608 609 9.901172 TTTTCTAGTCTCACCTAAAAAGTTTCT 57.099 29.630 0.00 0.00 0.00 2.52
611 612 9.682465 ACTTTTTCTAGTCTCACCTAAAAAGTT 57.318 29.630 15.95 6.42 46.71 2.66
614 615 9.901172 AGAACTTTTTCTAGTCTCACCTAAAAA 57.099 29.630 0.00 0.00 40.54 1.94
628 629 9.022884 GGTTCTCTAGTCCTAGAACTTTTTCTA 57.977 37.037 17.05 0.00 46.98 2.10
629 630 7.509659 TGGTTCTCTAGTCCTAGAACTTTTTCT 59.490 37.037 17.05 0.00 46.98 2.52
630 631 7.668492 TGGTTCTCTAGTCCTAGAACTTTTTC 58.332 38.462 17.05 5.62 46.98 2.29
631 632 7.613551 TGGTTCTCTAGTCCTAGAACTTTTT 57.386 36.000 17.05 0.00 46.98 1.94
632 633 7.613551 TTGGTTCTCTAGTCCTAGAACTTTT 57.386 36.000 17.05 0.00 46.98 2.27
633 634 7.070821 TGTTTGGTTCTCTAGTCCTAGAACTTT 59.929 37.037 17.05 0.00 46.98 2.66
634 635 6.553852 TGTTTGGTTCTCTAGTCCTAGAACTT 59.446 38.462 17.05 0.00 46.98 2.66
635 636 6.015265 GTGTTTGGTTCTCTAGTCCTAGAACT 60.015 42.308 17.05 0.00 46.98 3.01
637 638 5.245526 GGTGTTTGGTTCTCTAGTCCTAGAA 59.754 44.000 5.60 0.00 41.22 2.10
638 639 4.771054 GGTGTTTGGTTCTCTAGTCCTAGA 59.229 45.833 4.10 4.10 39.67 2.43
639 640 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
640 641 4.282703 GTGGTGTTTGGTTCTCTAGTCCTA 59.717 45.833 0.00 0.00 0.00 2.94
641 642 3.071167 GTGGTGTTTGGTTCTCTAGTCCT 59.929 47.826 0.00 0.00 0.00 3.85
642 643 3.400255 GTGGTGTTTGGTTCTCTAGTCC 58.600 50.000 0.00 0.00 0.00 3.85
643 644 3.071167 AGGTGGTGTTTGGTTCTCTAGTC 59.929 47.826 0.00 0.00 0.00 2.59
644 645 3.046374 AGGTGGTGTTTGGTTCTCTAGT 58.954 45.455 0.00 0.00 0.00 2.57
645 646 3.771577 AGGTGGTGTTTGGTTCTCTAG 57.228 47.619 0.00 0.00 0.00 2.43
646 647 4.504340 GCTAAGGTGGTGTTTGGTTCTCTA 60.504 45.833 0.00 0.00 0.00 2.43
647 648 3.747708 GCTAAGGTGGTGTTTGGTTCTCT 60.748 47.826 0.00 0.00 0.00 3.10
648 649 2.552743 GCTAAGGTGGTGTTTGGTTCTC 59.447 50.000 0.00 0.00 0.00 2.87
649 650 2.583143 GCTAAGGTGGTGTTTGGTTCT 58.417 47.619 0.00 0.00 0.00 3.01
650 651 1.611977 GGCTAAGGTGGTGTTTGGTTC 59.388 52.381 0.00 0.00 0.00 3.62
651 652 1.063567 TGGCTAAGGTGGTGTTTGGTT 60.064 47.619 0.00 0.00 0.00 3.67
652 653 0.553819 TGGCTAAGGTGGTGTTTGGT 59.446 50.000 0.00 0.00 0.00 3.67
653 654 1.247567 CTGGCTAAGGTGGTGTTTGG 58.752 55.000 0.00 0.00 0.00 3.28
654 655 1.880027 GACTGGCTAAGGTGGTGTTTG 59.120 52.381 0.00 0.00 0.00 2.93
655 656 1.493022 TGACTGGCTAAGGTGGTGTTT 59.507 47.619 0.00 0.00 0.00 2.83
656 657 1.136828 TGACTGGCTAAGGTGGTGTT 58.863 50.000 0.00 0.00 0.00 3.32
657 658 1.136828 TTGACTGGCTAAGGTGGTGT 58.863 50.000 0.00 0.00 0.00 4.16
658 659 1.202758 TGTTGACTGGCTAAGGTGGTG 60.203 52.381 0.00 0.00 0.00 4.17
659 660 1.136828 TGTTGACTGGCTAAGGTGGT 58.863 50.000 0.00 0.00 0.00 4.16
660 661 2.496899 ATGTTGACTGGCTAAGGTGG 57.503 50.000 0.00 0.00 0.00 4.61
661 662 5.957842 TTTTATGTTGACTGGCTAAGGTG 57.042 39.130 0.00 0.00 0.00 4.00
688 689 1.891150 ACCGGTCACGAACTAATCAGT 59.109 47.619 0.00 0.00 44.60 3.41
689 690 2.259618 CACCGGTCACGAACTAATCAG 58.740 52.381 2.59 0.00 44.60 2.90
690 691 1.614903 ACACCGGTCACGAACTAATCA 59.385 47.619 2.59 0.00 44.60 2.57
691 692 2.358939 ACACCGGTCACGAACTAATC 57.641 50.000 2.59 0.00 44.60 1.75
692 693 2.825861 AACACCGGTCACGAACTAAT 57.174 45.000 2.59 0.00 44.60 1.73
693 694 2.101249 AGAAACACCGGTCACGAACTAA 59.899 45.455 2.59 0.00 44.60 2.24
705 706 2.442188 GCGACGCCTAGAAACACCG 61.442 63.158 9.14 0.00 0.00 4.94
839 848 7.148171 GCAAGTAGTGGAGCTCAAATTTTCTAT 60.148 37.037 17.19 0.00 0.00 1.98
909 918 0.250467 GCAAGTGGTGGCTCTGAAGA 60.250 55.000 0.00 0.00 0.00 2.87
910 919 0.250640 AGCAAGTGGTGGCTCTGAAG 60.251 55.000 0.00 0.00 34.76 3.02
911 920 0.183492 AAGCAAGTGGTGGCTCTGAA 59.817 50.000 0.00 0.00 40.01 3.02
1014 1024 3.368531 GCCTATCCGTGGATGAATAGGTC 60.369 52.174 11.68 3.63 36.17 3.85
1034 1044 0.813821 GCTTCCAAATCAGAGGTGCC 59.186 55.000 0.00 0.00 0.00 5.01
1307 1317 0.930726 AGTACCCTGAGGAGGAGGAG 59.069 60.000 0.00 0.00 42.93 3.69
1308 1318 0.631753 CAGTACCCTGAGGAGGAGGA 59.368 60.000 0.00 0.00 42.93 3.71
1309 1319 0.631753 TCAGTACCCTGAGGAGGAGG 59.368 60.000 0.00 0.00 42.80 4.30
1340 1350 2.618709 AGCTACCAACTGCTCACAAAAC 59.381 45.455 0.00 0.00 33.90 2.43
1446 1462 3.489355 TGCCCAAGCATGTTCCTATATG 58.511 45.455 0.00 0.00 46.52 1.78
1849 1868 5.904941 TGGATTGCCATTTTAGCTAACATG 58.095 37.500 20.93 20.93 39.92 3.21
1894 1913 8.029522 CACAAGTTCTAGCTCATTAGTGAACTA 58.970 37.037 0.00 0.00 38.10 2.24
1896 1915 6.868864 TCACAAGTTCTAGCTCATTAGTGAAC 59.131 38.462 0.00 0.00 33.05 3.18
1901 1920 4.808364 GCCTCACAAGTTCTAGCTCATTAG 59.192 45.833 0.00 0.00 0.00 1.73
1925 1944 3.069586 CCATCCTTGGATAGCGTAGTTCA 59.930 47.826 1.37 0.00 46.92 3.18
1934 1953 2.689983 GGTTTGCACCATCCTTGGATAG 59.310 50.000 1.37 0.00 46.92 2.08
2095 2114 6.321945 TGATAGTGGCTTTGACATTATTGCAT 59.678 34.615 0.00 0.00 0.00 3.96
2124 2143 5.243283 AGAGGAAAATATGATGCCAGAATGC 59.757 40.000 0.00 0.00 31.97 3.56
2151 2170 4.675190 ATCTGCGAATCTGTGTGAAAAG 57.325 40.909 0.00 0.00 0.00 2.27
2563 2582 4.724399 TCAAGTTGTTACACATCCACCAT 58.276 39.130 2.11 0.00 0.00 3.55
2649 2668 4.671377 GCATAGGCAAATGAACATTTCGA 58.329 39.130 9.42 0.00 38.84 3.71
2958 2977 3.319031 ATGTGGAATCTTCCCCATTCC 57.681 47.619 6.51 4.73 41.76 3.01
3065 3084 5.178797 TCTTAGACTAAGCAGGCAATGAAC 58.821 41.667 16.17 0.00 35.76 3.18
3367 3386 1.464997 GACTGCTTTACCTTTCCTGCG 59.535 52.381 0.00 0.00 0.00 5.18
3540 3559 2.436109 GTGGGGCACATCACCTGT 59.564 61.111 0.00 0.00 39.20 4.00
3640 3659 9.162764 ACAACTTACATAGCGATACAAGAATTT 57.837 29.630 5.76 0.00 0.00 1.82
3690 3709 1.396653 CTTGAATCCCTGACATGCCC 58.603 55.000 0.00 0.00 0.00 5.36
3892 3919 4.920376 AGGCGTGTAACATTCATTAATGC 58.080 39.130 10.76 0.00 45.41 3.56
3909 3936 3.074412 CACATTAGGACTCAAAAGGCGT 58.926 45.455 0.00 0.00 32.18 5.68
3945 3972 1.468520 CTTACACCGGTGCCATTGAAG 59.531 52.381 34.26 21.22 0.00 3.02
4017 4044 9.920826 GTATTACACATCACACAAATAGTCATG 57.079 33.333 0.00 0.00 0.00 3.07
4170 4197 5.491078 TCCCATAATATGTCCCAGGGAATAC 59.509 44.000 10.89 0.00 40.68 1.89
4179 4206 4.105697 TCCCAAAGTCCCATAATATGTCCC 59.894 45.833 0.00 0.00 0.00 4.46
4180 4207 5.070685 GTCCCAAAGTCCCATAATATGTCC 58.929 45.833 0.00 0.00 0.00 4.02
4182 4209 4.445735 CCGTCCCAAAGTCCCATAATATGT 60.446 45.833 0.00 0.00 0.00 2.29
4184 4211 3.977999 TCCGTCCCAAAGTCCCATAATAT 59.022 43.478 0.00 0.00 0.00 1.28
4185 4212 3.386063 TCCGTCCCAAAGTCCCATAATA 58.614 45.455 0.00 0.00 0.00 0.98
4187 4214 1.659022 TCCGTCCCAAAGTCCCATAA 58.341 50.000 0.00 0.00 0.00 1.90
4188 4215 1.557832 CTTCCGTCCCAAAGTCCCATA 59.442 52.381 0.00 0.00 0.00 2.74
4191 4218 0.978907 TACTTCCGTCCCAAAGTCCC 59.021 55.000 0.00 0.00 37.02 4.46
4192 4219 2.845363 TTACTTCCGTCCCAAAGTCC 57.155 50.000 0.00 0.00 37.02 3.85
4193 4220 5.425630 ACATATTACTTCCGTCCCAAAGTC 58.574 41.667 0.00 0.00 37.02 3.01
4261 5424 6.549364 TGGGATAAGAAAGCTCAAAACTTCAA 59.451 34.615 0.00 0.00 0.00 2.69
4273 5436 5.163612 CCTTTAACTGCTGGGATAAGAAAGC 60.164 44.000 0.00 0.00 36.18 3.51
4311 5474 5.163754 ACGTCTAATAAAGGATGCAGTTTGC 60.164 40.000 0.00 0.00 45.29 3.68
4331 5494 1.600023 TCCCCATGTGTTTGAACGTC 58.400 50.000 0.00 0.00 0.00 4.34
4389 5552 2.364317 CTCTCTTCCTCCCGGGCA 60.364 66.667 18.49 3.68 34.39 5.36
4399 5562 2.075338 CAAAGGCAGCTGTCTCTCTTC 58.925 52.381 23.47 0.00 0.00 2.87
4407 5570 0.600057 GCTTTAGCAAAGGCAGCTGT 59.400 50.000 16.64 0.00 43.33 4.40
4428 5591 0.535102 AAACACAACGGAGAGGCCAG 60.535 55.000 5.01 0.00 35.94 4.85
4429 5592 0.534203 GAAACACAACGGAGAGGCCA 60.534 55.000 5.01 0.00 35.94 5.36
4482 5645 2.887152 ACATCAAGCACCAAAAGAGGTC 59.113 45.455 0.00 0.00 40.77 3.85
4488 5651 1.340889 GCAGGACATCAAGCACCAAAA 59.659 47.619 0.00 0.00 0.00 2.44
4490 5653 0.178995 TGCAGGACATCAAGCACCAA 60.179 50.000 0.00 0.00 31.05 3.67
4505 5668 2.998670 CCGGTATCATGCTATCTTGCAG 59.001 50.000 0.00 0.00 46.71 4.41
4519 5682 3.627577 ACAAGATGAAACATGCCGGTATC 59.372 43.478 0.34 0.00 0.00 2.24
4529 5692 6.920817 AGTGACGAGTATACAAGATGAAACA 58.079 36.000 5.50 0.00 0.00 2.83
4531 5694 8.277490 AGTAGTGACGAGTATACAAGATGAAA 57.723 34.615 5.50 0.00 0.00 2.69
4545 5711 3.917329 TTGTCTGGAAGTAGTGACGAG 57.083 47.619 0.00 0.00 33.76 4.18
4570 5736 1.956170 CAGTCCGTGTGTGTGGCTC 60.956 63.158 0.00 0.00 0.00 4.70
4571 5737 2.108976 CAGTCCGTGTGTGTGGCT 59.891 61.111 0.00 0.00 0.00 4.75
4598 5764 1.790387 GCTCACACTTGCCATCGAC 59.210 57.895 0.00 0.00 0.00 4.20
4612 5780 3.120385 CGTGCAATGAGGCGCTCA 61.120 61.111 7.64 9.80 44.99 4.26
4616 5784 2.202388 CAAGCGTGCAATGAGGCG 60.202 61.111 0.00 0.00 36.28 5.52
4631 5799 2.079158 CCAGCAATTCTCGAAGCTCAA 58.921 47.619 0.00 0.00 34.61 3.02
4634 5802 2.559440 GATCCAGCAATTCTCGAAGCT 58.441 47.619 0.00 0.00 37.95 3.74
4643 5811 2.833943 GGGTTTTCTGGATCCAGCAATT 59.166 45.455 33.39 0.00 43.31 2.32
4648 5816 3.439857 TTGAGGGTTTTCTGGATCCAG 57.560 47.619 32.60 32.60 44.86 3.86
4660 5828 5.825151 GCTTCAGCTATTATCTTTGAGGGTT 59.175 40.000 0.00 0.00 38.21 4.11
4679 5847 3.770933 ACGGTAATTACCTAGGTGCTTCA 59.229 43.478 27.89 0.00 44.25 3.02
4682 5850 4.028825 AGAACGGTAATTACCTAGGTGCT 58.971 43.478 27.89 20.22 44.25 4.40
4701 5869 0.179067 GTGGTGTGTCGGGACAAGAA 60.179 55.000 2.58 0.00 43.77 2.52
4724 5892 3.462678 GGAGACCGAGGTGCCTCC 61.463 72.222 12.20 12.46 39.77 4.30
4727 5895 1.153349 GATTGGAGACCGAGGTGCC 60.153 63.158 0.00 1.55 0.00 5.01
4762 5930 2.808523 TGCGGTGAAAATGAATGCAA 57.191 40.000 0.00 0.00 0.00 4.08
4763 5931 2.608268 CATGCGGTGAAAATGAATGCA 58.392 42.857 0.00 0.00 35.10 3.96
4764 5932 1.928503 CCATGCGGTGAAAATGAATGC 59.071 47.619 0.00 0.00 0.00 3.56
4779 5947 3.211963 CCCGCCTGTTAGCCATGC 61.212 66.667 0.00 0.00 0.00 4.06
4802 5970 2.358247 CAACCGCCGCTGTTAGGT 60.358 61.111 0.00 0.00 38.88 3.08
4826 5994 9.125026 GACCTGTATGTGAATTCTGGAAATAAT 57.875 33.333 7.05 0.00 0.00 1.28
4835 6003 5.675538 GCTAAGGACCTGTATGTGAATTCT 58.324 41.667 7.05 0.00 0.00 2.40
4839 6007 2.418197 GCGCTAAGGACCTGTATGTGAA 60.418 50.000 0.00 0.00 0.00 3.18
4841 6009 1.571919 GCGCTAAGGACCTGTATGTG 58.428 55.000 0.00 0.00 0.00 3.21
4846 6014 3.771160 CCCGCGCTAAGGACCTGT 61.771 66.667 5.56 0.00 0.00 4.00
4851 6019 3.659089 GAACAGCCCGCGCTAAGGA 62.659 63.158 5.56 0.00 46.25 3.36
4853 6021 2.125512 AGAACAGCCCGCGCTAAG 60.126 61.111 5.56 0.00 46.25 2.18
4854 6022 2.125673 GAGAACAGCCCGCGCTAA 60.126 61.111 5.56 0.00 46.25 3.09
4855 6023 3.064987 GAGAGAACAGCCCGCGCTA 62.065 63.158 5.56 0.00 46.25 4.26
4857 6025 4.742201 TGAGAGAACAGCCCGCGC 62.742 66.667 0.00 0.00 0.00 6.86
4858 6026 2.507992 CTGAGAGAACAGCCCGCG 60.508 66.667 0.00 0.00 0.00 6.46
4859 6027 2.125350 CCTGAGAGAACAGCCCGC 60.125 66.667 0.00 0.00 36.67 6.13
4860 6028 1.975327 TTCCTGAGAGAACAGCCCG 59.025 57.895 0.00 0.00 36.67 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.