Multiple sequence alignment - TraesCS6A01G239500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G239500 chr6A 100.000 3684 0 0 1 3684 449666497 449670180 0.000000e+00 6804.0
1 TraesCS6A01G239500 chr6A 83.179 541 87 4 2125 2663 15542665 15543203 3.310000e-135 492.0
2 TraesCS6A01G239500 chr6A 81.667 540 97 2 2125 2663 15457251 15456713 7.260000e-122 448.0
3 TraesCS6A01G239500 chr6A 86.822 387 48 2 174 559 597692715 597692331 2.630000e-116 429.0
4 TraesCS6A01G239500 chr6A 89.474 171 15 3 6 174 298578915 298578746 2.880000e-51 213.0
5 TraesCS6A01G239500 chr6B 92.704 3070 165 28 636 3684 513890406 513887375 0.000000e+00 4373.0
6 TraesCS6A01G239500 chr6B 80.741 540 102 2 2125 2663 26004843 26005381 1.580000e-113 420.0
7 TraesCS6A01G239500 chr6B 79.815 540 100 6 2125 2663 26120787 26120256 5.770000e-103 385.0
8 TraesCS6A01G239500 chr6D 96.566 2184 50 6 636 2815 312804436 312806598 0.000000e+00 3594.0
9 TraesCS6A01G239500 chr6D 87.097 868 96 10 2812 3676 312812404 312813258 0.000000e+00 968.0
10 TraesCS6A01G239500 chr6D 82.056 535 94 2 2130 2663 14201800 14201267 4.340000e-124 455.0
11 TraesCS6A01G239500 chr6D 81.852 540 96 2 2125 2663 14241493 14242031 1.560000e-123 453.0
12 TraesCS6A01G239500 chr5A 91.214 387 33 1 174 559 556520448 556520062 3.260000e-145 525.0
13 TraesCS6A01G239500 chr5A 84.521 407 42 2 174 559 488997677 488998083 2.080000e-102 383.0
14 TraesCS6A01G239500 chr4A 88.889 387 42 1 174 559 632754937 632755323 3.330000e-130 475.0
15 TraesCS6A01G239500 chr4A 88.175 389 43 3 174 559 595042705 595043093 9.320000e-126 460.0
16 TraesCS6A01G239500 chr4A 90.286 175 15 2 1 173 298751973 298752147 1.030000e-55 228.0
17 TraesCS6A01G239500 chr4A 88.166 169 19 1 5 173 153655890 153656057 2.240000e-47 200.0
18 TraesCS6A01G239500 chr2D 86.978 407 32 10 174 559 445184389 445184795 4.370000e-119 438.0
19 TraesCS6A01G239500 chr2D 83.744 406 42 6 176 559 425744149 425743746 2.700000e-96 363.0
20 TraesCS6A01G239500 chr2D 82.641 409 44 7 176 559 285349675 285350081 1.640000e-88 337.0
21 TraesCS6A01G239500 chr2D 83.544 79 10 3 1365 1443 637451081 637451006 1.840000e-08 71.3
22 TraesCS6A01G239500 chr7A 86.765 408 32 6 174 559 101804737 101805144 5.650000e-118 435.0
23 TraesCS6A01G239500 chr7A 74.549 499 91 21 1103 1586 548585806 548585329 6.280000e-43 185.0
24 TraesCS6A01G239500 chr7D 86.486 407 34 12 174 559 446355212 446354806 9.450000e-116 427.0
25 TraesCS6A01G239500 chr7D 85.012 407 40 5 174 559 108238686 108238280 9.590000e-106 394.0
26 TraesCS6A01G239500 chr7D 74.749 499 90 21 1103 1586 481697482 481697005 1.350000e-44 191.0
27 TraesCS6A01G239500 chr4D 85.749 407 36 3 174 559 405710022 405710427 9.520000e-111 411.0
28 TraesCS6A01G239500 chr4D 100.000 30 0 0 2919 2948 442186633 442186662 5.140000e-04 56.5
29 TraesCS6A01G239500 chr3A 93.651 189 10 2 174 360 24692515 24692327 7.790000e-72 281.0
30 TraesCS6A01G239500 chr3A 90.909 176 13 3 1 174 578901126 578900952 2.210000e-57 233.0
31 TraesCS6A01G239500 chr3A 89.143 175 16 3 1 173 247548552 247548725 8.010000e-52 215.0
32 TraesCS6A01G239500 chr3A 88.304 171 17 3 5 173 247540551 247540720 6.240000e-48 202.0
33 TraesCS6A01G239500 chr3B 76.306 536 94 23 1067 1585 708520793 708520274 4.720000e-64 255.0
34 TraesCS6A01G239500 chr3D 75.468 534 102 20 1067 1585 536327450 536327969 2.210000e-57 233.0
35 TraesCS6A01G239500 chr2A 91.124 169 14 1 5 173 353296933 353296766 1.030000e-55 228.0
36 TraesCS6A01G239500 chr2A 88.439 173 19 1 1 173 264408975 264409146 1.340000e-49 207.0
37 TraesCS6A01G239500 chr2A 86.932 176 18 5 7 178 235666244 235666070 3.750000e-45 193.0
38 TraesCS6A01G239500 chr2A 82.927 82 5 5 1370 1443 762554998 762555078 8.540000e-07 65.8
39 TraesCS6A01G239500 chr7B 75.050 497 92 21 1103 1586 507141096 507140619 6.240000e-48 202.0
40 TraesCS6A01G239500 chr7B 73.774 469 113 9 2188 2650 507139298 507138834 3.780000e-40 176.0
41 TraesCS6A01G239500 chr1B 74.931 363 70 13 3202 3544 278501734 278501373 2.960000e-31 147.0
42 TraesCS6A01G239500 chr2B 88.889 72 8 0 1371 1442 794786213 794786284 5.070000e-14 89.8
43 TraesCS6A01G239500 chr5D 100.000 28 0 0 2930 2957 424279054 424279081 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G239500 chr6A 449666497 449670180 3683 False 6804 6804 100.000 1 3684 1 chr6A.!!$F2 3683
1 TraesCS6A01G239500 chr6A 15542665 15543203 538 False 492 492 83.179 2125 2663 1 chr6A.!!$F1 538
2 TraesCS6A01G239500 chr6A 15456713 15457251 538 True 448 448 81.667 2125 2663 1 chr6A.!!$R1 538
3 TraesCS6A01G239500 chr6B 513887375 513890406 3031 True 4373 4373 92.704 636 3684 1 chr6B.!!$R2 3048
4 TraesCS6A01G239500 chr6B 26004843 26005381 538 False 420 420 80.741 2125 2663 1 chr6B.!!$F1 538
5 TraesCS6A01G239500 chr6B 26120256 26120787 531 True 385 385 79.815 2125 2663 1 chr6B.!!$R1 538
6 TraesCS6A01G239500 chr6D 312804436 312806598 2162 False 3594 3594 96.566 636 2815 1 chr6D.!!$F2 2179
7 TraesCS6A01G239500 chr6D 312812404 312813258 854 False 968 968 87.097 2812 3676 1 chr6D.!!$F3 864
8 TraesCS6A01G239500 chr6D 14201267 14201800 533 True 455 455 82.056 2130 2663 1 chr6D.!!$R1 533
9 TraesCS6A01G239500 chr6D 14241493 14242031 538 False 453 453 81.852 2125 2663 1 chr6D.!!$F1 538
10 TraesCS6A01G239500 chr3B 708520274 708520793 519 True 255 255 76.306 1067 1585 1 chr3B.!!$R1 518
11 TraesCS6A01G239500 chr3D 536327450 536327969 519 False 233 233 75.468 1067 1585 1 chr3D.!!$F1 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 164 0.035458 AACTGAAGCTCCGGTCTTGG 59.965 55.0 14.63 10.22 0.00 3.61 F
260 261 0.035458 AGCACAGTAGGGCAGTTGTC 59.965 55.0 0.00 0.00 0.00 3.18 F
517 518 0.095245 GATGTGGATTCACGCGTGTG 59.905 55.0 35.74 22.93 46.42 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 1991 0.451783 GCACCATCCGGTTGATCAAC 59.548 55.000 27.16 27.16 46.31 3.18 R
2393 2421 1.292223 CCGTGTTGTGGACGATCCT 59.708 57.895 0.00 0.00 39.21 3.24 R
2984 3026 3.063997 GCCTTGTTCATGTTATGAGGTCG 59.936 47.826 0.00 0.00 40.94 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.927668 CACTATGTGAATTTCCTTGGTTTAAAT 57.072 29.630 0.00 0.00 35.23 1.40
27 28 9.927668 ACTATGTGAATTTCCTTGGTTTAAATG 57.072 29.630 0.00 0.00 0.00 2.32
28 29 9.369904 CTATGTGAATTTCCTTGGTTTAAATGG 57.630 33.333 0.00 0.00 0.00 3.16
29 30 7.366847 TGTGAATTTCCTTGGTTTAAATGGA 57.633 32.000 0.00 0.00 0.00 3.41
30 31 7.972301 TGTGAATTTCCTTGGTTTAAATGGAT 58.028 30.769 0.00 0.00 0.00 3.41
31 32 8.093927 TGTGAATTTCCTTGGTTTAAATGGATC 58.906 33.333 0.00 0.00 0.00 3.36
32 33 8.314021 GTGAATTTCCTTGGTTTAAATGGATCT 58.686 33.333 0.00 0.00 0.00 2.75
33 34 9.540538 TGAATTTCCTTGGTTTAAATGGATCTA 57.459 29.630 0.00 0.00 0.00 1.98
36 37 9.768215 ATTTCCTTGGTTTAAATGGATCTAAGA 57.232 29.630 0.00 0.00 0.00 2.10
37 38 9.768215 TTTCCTTGGTTTAAATGGATCTAAGAT 57.232 29.630 0.00 0.00 0.00 2.40
38 39 8.980481 TCCTTGGTTTAAATGGATCTAAGATC 57.020 34.615 0.00 0.00 0.00 2.75
39 40 7.998964 TCCTTGGTTTAAATGGATCTAAGATCC 59.001 37.037 0.00 0.00 38.66 3.36
48 49 5.329191 TGGATCTAAGATCCATGCCATTT 57.671 39.130 15.76 0.00 42.81 2.32
49 50 6.452757 TGGATCTAAGATCCATGCCATTTA 57.547 37.500 15.76 0.00 42.81 1.40
50 51 7.036154 TGGATCTAAGATCCATGCCATTTAT 57.964 36.000 15.76 0.00 42.81 1.40
51 52 7.472741 TGGATCTAAGATCCATGCCATTTATT 58.527 34.615 15.76 0.00 42.81 1.40
52 53 7.951806 TGGATCTAAGATCCATGCCATTTATTT 59.048 33.333 15.76 0.00 42.81 1.40
53 54 9.466497 GGATCTAAGATCCATGCCATTTATTTA 57.534 33.333 0.00 0.00 38.09 1.40
56 57 9.866655 TCTAAGATCCATGCCATTTATTTAGTT 57.133 29.630 0.00 0.00 0.00 2.24
57 58 9.903682 CTAAGATCCATGCCATTTATTTAGTTG 57.096 33.333 0.00 0.00 0.00 3.16
58 59 8.537728 AAGATCCATGCCATTTATTTAGTTGA 57.462 30.769 0.00 0.00 0.00 3.18
59 60 8.174733 AGATCCATGCCATTTATTTAGTTGAG 57.825 34.615 0.00 0.00 0.00 3.02
60 61 7.781693 AGATCCATGCCATTTATTTAGTTGAGT 59.218 33.333 0.00 0.00 0.00 3.41
61 62 7.716799 TCCATGCCATTTATTTAGTTGAGTT 57.283 32.000 0.00 0.00 0.00 3.01
62 63 8.815565 TCCATGCCATTTATTTAGTTGAGTTA 57.184 30.769 0.00 0.00 0.00 2.24
63 64 9.249053 TCCATGCCATTTATTTAGTTGAGTTAA 57.751 29.630 0.00 0.00 0.00 2.01
64 65 9.868277 CCATGCCATTTATTTAGTTGAGTTAAA 57.132 29.630 0.00 0.00 0.00 1.52
90 91 7.591006 AAAAGAAATGACATGATGCAATGAC 57.409 32.000 0.00 0.03 0.00 3.06
91 92 5.907866 AGAAATGACATGATGCAATGACA 57.092 34.783 0.00 5.78 36.81 3.58
92 93 6.275494 AGAAATGACATGATGCAATGACAA 57.725 33.333 0.00 0.00 36.18 3.18
93 94 6.693466 AGAAATGACATGATGCAATGACAAA 58.307 32.000 0.00 0.00 36.18 2.83
94 95 7.327975 AGAAATGACATGATGCAATGACAAAT 58.672 30.769 0.00 0.00 36.18 2.32
95 96 6.902224 AATGACATGATGCAATGACAAATG 57.098 33.333 0.00 0.00 36.18 2.32
96 97 4.177783 TGACATGATGCAATGACAAATGC 58.822 39.130 0.00 9.09 42.86 3.56
103 104 3.422890 GCAATGACAAATGCAACGAAC 57.577 42.857 10.71 0.00 42.12 3.95
104 105 2.155539 GCAATGACAAATGCAACGAACC 59.844 45.455 10.71 0.00 42.12 3.62
105 106 3.379240 CAATGACAAATGCAACGAACCA 58.621 40.909 0.00 0.00 0.00 3.67
106 107 3.724508 ATGACAAATGCAACGAACCAA 57.275 38.095 0.00 0.00 0.00 3.67
107 108 3.510388 TGACAAATGCAACGAACCAAA 57.490 38.095 0.00 0.00 0.00 3.28
108 109 3.182967 TGACAAATGCAACGAACCAAAC 58.817 40.909 0.00 0.00 0.00 2.93
109 110 3.182967 GACAAATGCAACGAACCAAACA 58.817 40.909 0.00 0.00 0.00 2.83
110 111 3.186119 ACAAATGCAACGAACCAAACAG 58.814 40.909 0.00 0.00 0.00 3.16
111 112 3.119316 ACAAATGCAACGAACCAAACAGA 60.119 39.130 0.00 0.00 0.00 3.41
112 113 4.050553 CAAATGCAACGAACCAAACAGAT 58.949 39.130 0.00 0.00 0.00 2.90
113 114 3.559238 ATGCAACGAACCAAACAGATC 57.441 42.857 0.00 0.00 0.00 2.75
114 115 2.293170 TGCAACGAACCAAACAGATCA 58.707 42.857 0.00 0.00 0.00 2.92
115 116 2.032799 TGCAACGAACCAAACAGATCAC 59.967 45.455 0.00 0.00 0.00 3.06
116 117 2.032799 GCAACGAACCAAACAGATCACA 59.967 45.455 0.00 0.00 0.00 3.58
117 118 3.304659 GCAACGAACCAAACAGATCACAT 60.305 43.478 0.00 0.00 0.00 3.21
118 119 4.221342 CAACGAACCAAACAGATCACATG 58.779 43.478 0.00 0.00 0.00 3.21
119 120 3.738982 ACGAACCAAACAGATCACATGA 58.261 40.909 0.00 0.00 0.00 3.07
120 121 3.498397 ACGAACCAAACAGATCACATGAC 59.502 43.478 0.00 0.00 0.00 3.06
121 122 3.423515 CGAACCAAACAGATCACATGACG 60.424 47.826 0.00 0.00 0.00 4.35
122 123 3.401033 ACCAAACAGATCACATGACGA 57.599 42.857 0.00 0.00 0.00 4.20
123 124 3.738982 ACCAAACAGATCACATGACGAA 58.261 40.909 0.00 0.00 0.00 3.85
124 125 4.133820 ACCAAACAGATCACATGACGAAA 58.866 39.130 0.00 0.00 0.00 3.46
125 126 4.024048 ACCAAACAGATCACATGACGAAAC 60.024 41.667 0.00 0.00 0.00 2.78
126 127 4.466828 CAAACAGATCACATGACGAAACC 58.533 43.478 0.00 0.00 0.00 3.27
127 128 2.699954 ACAGATCACATGACGAAACCC 58.300 47.619 0.00 0.00 0.00 4.11
128 129 1.660607 CAGATCACATGACGAAACCCG 59.339 52.381 0.00 0.00 45.44 5.28
129 130 1.548719 AGATCACATGACGAAACCCGA 59.451 47.619 0.00 0.00 41.76 5.14
130 131 2.028476 AGATCACATGACGAAACCCGAA 60.028 45.455 0.00 0.00 41.76 4.30
131 132 2.242047 TCACATGACGAAACCCGAAA 57.758 45.000 0.00 0.00 41.76 3.46
132 133 2.562635 TCACATGACGAAACCCGAAAA 58.437 42.857 0.00 0.00 41.76 2.29
133 134 2.288458 TCACATGACGAAACCCGAAAAC 59.712 45.455 0.00 0.00 41.76 2.43
134 135 1.605232 ACATGACGAAACCCGAAAACC 59.395 47.619 0.00 0.00 41.76 3.27
135 136 1.604755 CATGACGAAACCCGAAAACCA 59.395 47.619 0.00 0.00 41.76 3.67
136 137 1.970092 TGACGAAACCCGAAAACCAT 58.030 45.000 0.00 0.00 41.76 3.55
137 138 1.604755 TGACGAAACCCGAAAACCATG 59.395 47.619 0.00 0.00 41.76 3.66
138 139 0.955905 ACGAAACCCGAAAACCATGG 59.044 50.000 11.19 11.19 41.76 3.66
139 140 1.240256 CGAAACCCGAAAACCATGGA 58.760 50.000 21.47 0.00 41.76 3.41
140 141 1.609555 CGAAACCCGAAAACCATGGAA 59.390 47.619 21.47 0.00 41.76 3.53
141 142 2.351350 CGAAACCCGAAAACCATGGAAG 60.351 50.000 21.47 4.27 41.76 3.46
142 143 1.627864 AACCCGAAAACCATGGAAGG 58.372 50.000 21.47 13.05 0.00 3.46
143 144 0.898326 ACCCGAAAACCATGGAAGGC 60.898 55.000 21.47 4.03 0.00 4.35
144 145 0.897863 CCCGAAAACCATGGAAGGCA 60.898 55.000 21.47 0.00 0.00 4.75
145 146 0.965439 CCGAAAACCATGGAAGGCAA 59.035 50.000 21.47 0.00 0.00 4.52
146 147 1.336795 CCGAAAACCATGGAAGGCAAC 60.337 52.381 21.47 2.08 0.00 4.17
158 159 2.032681 GGCAACTGAAGCTCCGGT 59.967 61.111 0.00 0.00 0.00 5.28
159 160 2.035442 GGCAACTGAAGCTCCGGTC 61.035 63.158 0.00 0.00 0.00 4.79
160 161 1.004440 GCAACTGAAGCTCCGGTCT 60.004 57.895 0.00 0.00 0.00 3.85
161 162 0.603975 GCAACTGAAGCTCCGGTCTT 60.604 55.000 0.00 6.37 0.00 3.01
162 163 1.151668 CAACTGAAGCTCCGGTCTTG 58.848 55.000 14.63 5.94 0.00 3.02
163 164 0.035458 AACTGAAGCTCCGGTCTTGG 59.965 55.000 14.63 10.22 0.00 3.61
164 165 1.078848 CTGAAGCTCCGGTCTTGGG 60.079 63.158 14.63 5.47 0.00 4.12
165 166 2.269241 GAAGCTCCGGTCTTGGGG 59.731 66.667 14.63 0.00 0.00 4.96
169 170 4.452733 CTCCGGTCTTGGGGCGTC 62.453 72.222 0.00 0.00 0.00 5.19
172 173 4.308458 CGGTCTTGGGGCGTCACA 62.308 66.667 0.00 0.00 0.00 3.58
173 174 2.668550 GGTCTTGGGGCGTCACAC 60.669 66.667 0.00 0.00 0.00 3.82
174 175 2.110213 GTCTTGGGGCGTCACACA 59.890 61.111 0.00 0.00 0.00 3.72
175 176 1.302511 GTCTTGGGGCGTCACACAT 60.303 57.895 0.00 0.00 0.00 3.21
176 177 1.302431 TCTTGGGGCGTCACACATG 60.302 57.895 0.00 0.00 0.00 3.21
177 178 1.600636 CTTGGGGCGTCACACATGT 60.601 57.895 0.00 0.00 0.00 3.21
178 179 0.321210 CTTGGGGCGTCACACATGTA 60.321 55.000 0.00 0.00 0.00 2.29
179 180 0.326595 TTGGGGCGTCACACATGTAT 59.673 50.000 0.00 0.00 0.00 2.29
180 181 0.107897 TGGGGCGTCACACATGTATC 60.108 55.000 0.00 0.00 0.00 2.24
181 182 0.814010 GGGGCGTCACACATGTATCC 60.814 60.000 0.00 0.00 0.00 2.59
182 183 0.178068 GGGCGTCACACATGTATCCT 59.822 55.000 0.00 0.00 0.00 3.24
183 184 1.411246 GGGCGTCACACATGTATCCTA 59.589 52.381 0.00 0.00 0.00 2.94
184 185 2.470821 GGCGTCACACATGTATCCTAC 58.529 52.381 0.00 0.00 0.00 3.18
185 186 2.159156 GGCGTCACACATGTATCCTACA 60.159 50.000 0.00 0.00 43.80 2.74
186 187 3.517602 GCGTCACACATGTATCCTACAA 58.482 45.455 0.00 0.00 42.76 2.41
187 188 3.930229 GCGTCACACATGTATCCTACAAA 59.070 43.478 0.00 0.00 42.76 2.83
188 189 4.390603 GCGTCACACATGTATCCTACAAAA 59.609 41.667 0.00 0.00 42.76 2.44
189 190 5.670341 GCGTCACACATGTATCCTACAAAAC 60.670 44.000 0.00 0.00 42.76 2.43
190 191 5.407084 CGTCACACATGTATCCTACAAAACA 59.593 40.000 0.00 0.00 42.76 2.83
191 192 6.599437 GTCACACATGTATCCTACAAAACAC 58.401 40.000 0.00 0.00 42.76 3.32
192 193 6.203915 GTCACACATGTATCCTACAAAACACA 59.796 38.462 0.00 0.00 42.76 3.72
193 194 6.939730 TCACACATGTATCCTACAAAACACAT 59.060 34.615 0.00 0.00 42.76 3.21
194 195 7.022979 CACACATGTATCCTACAAAACACATG 58.977 38.462 0.00 10.15 45.45 3.21
195 196 6.150976 ACACATGTATCCTACAAAACACATGG 59.849 38.462 14.80 7.91 44.67 3.66
196 197 5.125417 ACATGTATCCTACAAAACACATGGC 59.875 40.000 14.80 0.00 44.67 4.40
197 198 4.657013 TGTATCCTACAAAACACATGGCA 58.343 39.130 0.00 0.00 35.38 4.92
198 199 5.073428 TGTATCCTACAAAACACATGGCAA 58.927 37.500 0.00 0.00 35.38 4.52
199 200 4.519540 ATCCTACAAAACACATGGCAAC 57.480 40.909 0.00 0.00 0.00 4.17
200 201 3.561143 TCCTACAAAACACATGGCAACT 58.439 40.909 0.00 0.00 37.61 3.16
201 202 3.317711 TCCTACAAAACACATGGCAACTG 59.682 43.478 0.00 0.00 37.61 3.16
202 203 3.317711 CCTACAAAACACATGGCAACTGA 59.682 43.478 0.00 0.00 37.61 3.41
203 204 3.163630 ACAAAACACATGGCAACTGAC 57.836 42.857 0.00 0.00 37.61 3.51
204 205 2.495270 ACAAAACACATGGCAACTGACA 59.505 40.909 0.00 0.00 37.54 3.58
205 206 3.132646 ACAAAACACATGGCAACTGACAT 59.867 39.130 0.00 0.00 46.65 3.06
206 207 4.340666 ACAAAACACATGGCAACTGACATA 59.659 37.500 0.00 0.00 43.11 2.29
207 208 5.010922 ACAAAACACATGGCAACTGACATAT 59.989 36.000 0.00 0.00 43.11 1.78
208 209 5.726980 AAACACATGGCAACTGACATATT 57.273 34.783 0.00 0.00 43.11 1.28
209 210 4.970662 ACACATGGCAACTGACATATTC 57.029 40.909 0.00 0.00 43.11 1.75
210 211 3.374988 ACACATGGCAACTGACATATTCG 59.625 43.478 0.00 0.00 43.11 3.34
211 212 2.945008 ACATGGCAACTGACATATTCGG 59.055 45.455 0.00 0.00 43.11 4.30
212 213 3.205338 CATGGCAACTGACATATTCGGA 58.795 45.455 0.00 0.00 43.11 4.55
213 214 3.558931 TGGCAACTGACATATTCGGAT 57.441 42.857 0.00 0.00 34.26 4.18
214 215 4.681074 TGGCAACTGACATATTCGGATA 57.319 40.909 0.00 0.00 34.26 2.59
215 216 5.029807 TGGCAACTGACATATTCGGATAA 57.970 39.130 0.00 0.00 34.26 1.75
216 217 5.432645 TGGCAACTGACATATTCGGATAAA 58.567 37.500 0.00 0.00 34.26 1.40
217 218 5.883115 TGGCAACTGACATATTCGGATAAAA 59.117 36.000 0.00 0.00 34.26 1.52
218 219 6.038161 TGGCAACTGACATATTCGGATAAAAG 59.962 38.462 0.00 0.00 34.26 2.27
219 220 6.260050 GGCAACTGACATATTCGGATAAAAGA 59.740 38.462 0.00 0.00 34.26 2.52
220 221 7.348201 GCAACTGACATATTCGGATAAAAGAG 58.652 38.462 0.00 0.00 34.26 2.85
221 222 7.224753 GCAACTGACATATTCGGATAAAAGAGA 59.775 37.037 0.00 0.00 34.26 3.10
222 223 8.759641 CAACTGACATATTCGGATAAAAGAGAG 58.240 37.037 0.00 0.00 34.26 3.20
223 224 8.239038 ACTGACATATTCGGATAAAAGAGAGA 57.761 34.615 0.00 0.00 34.26 3.10
224 225 8.356657 ACTGACATATTCGGATAAAAGAGAGAG 58.643 37.037 0.00 0.00 34.26 3.20
225 226 8.239038 TGACATATTCGGATAAAAGAGAGAGT 57.761 34.615 0.00 0.00 0.00 3.24
226 227 8.696374 TGACATATTCGGATAAAAGAGAGAGTT 58.304 33.333 0.00 0.00 0.00 3.01
227 228 8.879342 ACATATTCGGATAAAAGAGAGAGTTG 57.121 34.615 0.00 0.00 0.00 3.16
228 229 7.439655 ACATATTCGGATAAAAGAGAGAGTTGC 59.560 37.037 0.00 0.00 0.00 4.17
229 230 4.124851 TCGGATAAAAGAGAGAGTTGCC 57.875 45.455 0.00 0.00 0.00 4.52
230 231 3.513912 TCGGATAAAAGAGAGAGTTGCCA 59.486 43.478 0.00 0.00 0.00 4.92
231 232 4.162320 TCGGATAAAAGAGAGAGTTGCCAT 59.838 41.667 0.00 0.00 0.00 4.40
232 233 4.878397 CGGATAAAAGAGAGAGTTGCCATT 59.122 41.667 0.00 0.00 0.00 3.16
233 234 5.355350 CGGATAAAAGAGAGAGTTGCCATTT 59.645 40.000 0.00 0.00 0.00 2.32
234 235 6.558909 GGATAAAAGAGAGAGTTGCCATTTG 58.441 40.000 0.00 0.00 0.00 2.32
235 236 3.930634 AAAGAGAGAGTTGCCATTTGC 57.069 42.857 0.00 0.00 41.77 3.68
236 237 2.875094 AGAGAGAGTTGCCATTTGCT 57.125 45.000 0.00 0.00 42.00 3.91
237 238 3.151912 AGAGAGAGTTGCCATTTGCTT 57.848 42.857 0.00 0.00 42.00 3.91
238 239 4.292186 AGAGAGAGTTGCCATTTGCTTA 57.708 40.909 0.00 0.00 42.00 3.09
239 240 4.006319 AGAGAGAGTTGCCATTTGCTTAC 58.994 43.478 0.00 0.00 42.00 2.34
240 241 3.753272 GAGAGAGTTGCCATTTGCTTACA 59.247 43.478 0.00 0.00 42.00 2.41
241 242 4.144297 AGAGAGTTGCCATTTGCTTACAA 58.856 39.130 0.00 0.00 42.00 2.41
242 243 4.217118 AGAGAGTTGCCATTTGCTTACAAG 59.783 41.667 0.00 0.00 42.00 3.16
254 255 2.472695 CTTACAAGCACAGTAGGGCA 57.527 50.000 0.00 0.00 0.00 5.36
255 256 2.350522 CTTACAAGCACAGTAGGGCAG 58.649 52.381 0.00 0.00 0.00 4.85
256 257 1.348064 TACAAGCACAGTAGGGCAGT 58.652 50.000 0.00 0.00 0.00 4.40
257 258 0.474184 ACAAGCACAGTAGGGCAGTT 59.526 50.000 0.00 0.00 0.00 3.16
258 259 0.877071 CAAGCACAGTAGGGCAGTTG 59.123 55.000 0.00 0.00 0.00 3.16
259 260 0.474184 AAGCACAGTAGGGCAGTTGT 59.526 50.000 0.00 0.00 0.00 3.32
260 261 0.035458 AGCACAGTAGGGCAGTTGTC 59.965 55.000 0.00 0.00 0.00 3.18
261 262 0.250295 GCACAGTAGGGCAGTTGTCA 60.250 55.000 0.00 0.00 0.00 3.58
262 263 1.611673 GCACAGTAGGGCAGTTGTCAT 60.612 52.381 0.00 0.00 0.00 3.06
263 264 2.079158 CACAGTAGGGCAGTTGTCATG 58.921 52.381 0.00 0.00 0.00 3.07
264 265 1.699634 ACAGTAGGGCAGTTGTCATGT 59.300 47.619 0.00 0.00 0.00 3.21
265 266 2.903784 ACAGTAGGGCAGTTGTCATGTA 59.096 45.455 0.00 0.00 0.00 2.29
266 267 3.262420 CAGTAGGGCAGTTGTCATGTAC 58.738 50.000 0.00 0.00 0.00 2.90
267 268 2.236395 AGTAGGGCAGTTGTCATGTACC 59.764 50.000 0.00 0.00 0.00 3.34
268 269 0.328258 AGGGCAGTTGTCATGTACCC 59.672 55.000 0.00 0.00 36.04 3.69
269 270 0.328258 GGGCAGTTGTCATGTACCCT 59.672 55.000 0.00 0.00 32.88 4.34
270 271 1.453155 GGCAGTTGTCATGTACCCTG 58.547 55.000 0.00 0.00 32.13 4.45
271 272 0.804989 GCAGTTGTCATGTACCCTGC 59.195 55.000 12.04 12.04 41.76 4.85
272 273 1.881925 GCAGTTGTCATGTACCCTGCA 60.882 52.381 18.44 0.00 44.97 4.41
273 274 2.503331 CAGTTGTCATGTACCCTGCAA 58.497 47.619 0.00 0.00 0.00 4.08
274 275 2.884012 CAGTTGTCATGTACCCTGCAAA 59.116 45.455 0.00 0.00 0.00 3.68
275 276 3.317711 CAGTTGTCATGTACCCTGCAAAA 59.682 43.478 0.00 0.00 0.00 2.44
276 277 3.317993 AGTTGTCATGTACCCTGCAAAAC 59.682 43.478 0.00 0.00 0.00 2.43
277 278 2.937519 TGTCATGTACCCTGCAAAACA 58.062 42.857 0.00 0.00 0.00 2.83
278 279 2.621055 TGTCATGTACCCTGCAAAACAC 59.379 45.455 0.00 0.00 0.00 3.32
279 280 2.621055 GTCATGTACCCTGCAAAACACA 59.379 45.455 0.00 0.00 0.00 3.72
280 281 3.255642 GTCATGTACCCTGCAAAACACAT 59.744 43.478 0.00 0.00 0.00 3.21
281 282 3.255395 TCATGTACCCTGCAAAACACATG 59.745 43.478 18.25 18.25 42.81 3.21
282 283 1.959985 TGTACCCTGCAAAACACATGG 59.040 47.619 0.00 0.00 0.00 3.66
283 284 0.965439 TACCCTGCAAAACACATGGC 59.035 50.000 0.00 0.00 0.00 4.40
284 285 1.047596 ACCCTGCAAAACACATGGCA 61.048 50.000 0.00 0.00 34.66 4.92
285 286 0.106335 CCCTGCAAAACACATGGCAA 59.894 50.000 0.00 0.00 35.59 4.52
286 287 1.219646 CCTGCAAAACACATGGCAAC 58.780 50.000 0.00 0.00 35.59 4.17
287 288 1.202557 CCTGCAAAACACATGGCAACT 60.203 47.619 0.00 0.00 35.59 3.16
288 289 1.862201 CTGCAAAACACATGGCAACTG 59.138 47.619 0.00 0.00 35.59 3.16
289 290 1.479730 TGCAAAACACATGGCAACTGA 59.520 42.857 0.00 0.00 32.54 3.41
290 291 1.860326 GCAAAACACATGGCAACTGAC 59.140 47.619 0.00 0.00 37.61 3.51
291 292 2.738000 GCAAAACACATGGCAACTGACA 60.738 45.455 0.00 0.00 37.54 3.58
292 293 3.117794 CAAAACACATGGCAACTGACAG 58.882 45.455 0.00 0.00 35.91 3.51
293 294 2.057137 AACACATGGCAACTGACAGT 57.943 45.000 1.07 1.07 35.91 3.55
294 295 2.057137 ACACATGGCAACTGACAGTT 57.943 45.000 15.23 15.23 39.39 3.16
295 296 2.378038 ACACATGGCAACTGACAGTTT 58.622 42.857 18.27 1.09 36.03 2.66
296 297 2.760092 ACACATGGCAACTGACAGTTTT 59.240 40.909 18.27 0.00 36.03 2.43
297 298 3.117794 CACATGGCAACTGACAGTTTTG 58.882 45.455 18.27 14.66 36.03 2.44
298 299 3.023119 ACATGGCAACTGACAGTTTTGA 58.977 40.909 18.27 5.36 36.03 2.69
299 300 3.067180 ACATGGCAACTGACAGTTTTGAG 59.933 43.478 18.27 8.41 36.03 3.02
300 301 2.722094 TGGCAACTGACAGTTTTGAGT 58.278 42.857 18.27 0.00 36.03 3.41
301 302 2.423185 TGGCAACTGACAGTTTTGAGTG 59.577 45.455 18.27 8.13 36.03 3.51
302 303 2.423538 GGCAACTGACAGTTTTGAGTGT 59.576 45.455 18.27 0.00 36.03 3.55
303 304 3.429085 GCAACTGACAGTTTTGAGTGTG 58.571 45.455 18.27 6.69 36.03 3.82
304 305 3.731867 GCAACTGACAGTTTTGAGTGTGG 60.732 47.826 18.27 5.26 36.03 4.17
305 306 2.643551 ACTGACAGTTTTGAGTGTGGG 58.356 47.619 1.07 0.00 0.00 4.61
306 307 2.238646 ACTGACAGTTTTGAGTGTGGGA 59.761 45.455 1.07 0.00 0.00 4.37
307 308 2.874701 CTGACAGTTTTGAGTGTGGGAG 59.125 50.000 0.00 0.00 0.00 4.30
308 309 2.503765 TGACAGTTTTGAGTGTGGGAGA 59.496 45.455 0.00 0.00 0.00 3.71
309 310 3.134458 GACAGTTTTGAGTGTGGGAGAG 58.866 50.000 0.00 0.00 0.00 3.20
310 311 2.158755 ACAGTTTTGAGTGTGGGAGAGG 60.159 50.000 0.00 0.00 0.00 3.69
311 312 2.104792 CAGTTTTGAGTGTGGGAGAGGA 59.895 50.000 0.00 0.00 0.00 3.71
312 313 2.370189 AGTTTTGAGTGTGGGAGAGGAG 59.630 50.000 0.00 0.00 0.00 3.69
313 314 2.368875 GTTTTGAGTGTGGGAGAGGAGA 59.631 50.000 0.00 0.00 0.00 3.71
314 315 1.633774 TTGAGTGTGGGAGAGGAGAC 58.366 55.000 0.00 0.00 0.00 3.36
315 316 0.609406 TGAGTGTGGGAGAGGAGACG 60.609 60.000 0.00 0.00 0.00 4.18
316 317 1.304547 AGTGTGGGAGAGGAGACGG 60.305 63.158 0.00 0.00 0.00 4.79
317 318 2.037367 TGTGGGAGAGGAGACGGG 59.963 66.667 0.00 0.00 0.00 5.28
318 319 3.462678 GTGGGAGAGGAGACGGGC 61.463 72.222 0.00 0.00 0.00 6.13
321 322 3.827898 GGAGAGGAGACGGGCGTG 61.828 72.222 0.00 0.00 0.00 5.34
322 323 3.063084 GAGAGGAGACGGGCGTGT 61.063 66.667 0.00 0.00 0.00 4.49
323 324 1.748122 GAGAGGAGACGGGCGTGTA 60.748 63.158 0.00 0.00 0.00 2.90
324 325 1.716826 GAGAGGAGACGGGCGTGTAG 61.717 65.000 0.00 0.00 0.00 2.74
325 326 2.754658 AGGAGACGGGCGTGTAGG 60.755 66.667 0.00 0.00 0.00 3.18
326 327 4.509737 GGAGACGGGCGTGTAGGC 62.510 72.222 0.00 0.00 45.91 3.93
333 334 2.260434 GGCGTGTAGGCGAACTGA 59.740 61.111 0.00 0.00 35.04 3.41
334 335 1.153628 GGCGTGTAGGCGAACTGAT 60.154 57.895 0.00 0.00 35.04 2.90
335 336 0.101759 GGCGTGTAGGCGAACTGATA 59.898 55.000 0.00 0.00 35.04 2.15
336 337 1.470285 GGCGTGTAGGCGAACTGATAA 60.470 52.381 0.00 0.00 35.04 1.75
337 338 2.264813 GCGTGTAGGCGAACTGATAAA 58.735 47.619 0.00 0.00 0.00 1.40
338 339 2.864343 GCGTGTAGGCGAACTGATAAAT 59.136 45.455 0.00 0.00 0.00 1.40
339 340 3.302480 GCGTGTAGGCGAACTGATAAATG 60.302 47.826 0.00 0.00 0.00 2.32
340 341 3.302480 CGTGTAGGCGAACTGATAAATGC 60.302 47.826 0.00 0.00 0.00 3.56
341 342 3.002348 GTGTAGGCGAACTGATAAATGCC 59.998 47.826 0.00 0.00 42.76 4.40
342 343 1.680338 AGGCGAACTGATAAATGCCC 58.320 50.000 0.00 0.00 43.46 5.36
343 344 1.064758 AGGCGAACTGATAAATGCCCA 60.065 47.619 0.00 0.00 43.46 5.36
344 345 1.065551 GGCGAACTGATAAATGCCCAC 59.934 52.381 0.00 0.00 36.51 4.61
345 346 1.742831 GCGAACTGATAAATGCCCACA 59.257 47.619 0.00 0.00 0.00 4.17
346 347 2.477863 GCGAACTGATAAATGCCCACAC 60.478 50.000 0.00 0.00 0.00 3.82
347 348 2.746904 CGAACTGATAAATGCCCACACA 59.253 45.455 0.00 0.00 0.00 3.72
348 349 3.426159 CGAACTGATAAATGCCCACACAC 60.426 47.826 0.00 0.00 0.00 3.82
349 350 2.446435 ACTGATAAATGCCCACACACC 58.554 47.619 0.00 0.00 0.00 4.16
350 351 2.224992 ACTGATAAATGCCCACACACCA 60.225 45.455 0.00 0.00 0.00 4.17
351 352 2.424601 CTGATAAATGCCCACACACCAG 59.575 50.000 0.00 0.00 0.00 4.00
352 353 1.134946 GATAAATGCCCACACACCAGC 59.865 52.381 0.00 0.00 0.00 4.85
353 354 0.897863 TAAATGCCCACACACCAGCC 60.898 55.000 0.00 0.00 0.00 4.85
354 355 4.684134 ATGCCCACACACCAGCCC 62.684 66.667 0.00 0.00 0.00 5.19
357 358 4.666253 CCCACACACCAGCCCCTG 62.666 72.222 0.00 0.00 0.00 4.45
358 359 3.889692 CCACACACCAGCCCCTGT 61.890 66.667 0.00 0.00 0.00 4.00
359 360 2.595463 CACACACCAGCCCCTGTG 60.595 66.667 4.18 4.18 42.98 3.66
360 361 3.096495 ACACACCAGCCCCTGTGT 61.096 61.111 5.31 5.31 44.94 3.72
361 362 2.595463 CACACCAGCCCCTGTGTG 60.595 66.667 8.20 8.20 37.26 3.82
362 363 3.889692 ACACCAGCCCCTGTGTGG 61.890 66.667 14.09 0.00 37.15 4.17
371 372 2.111043 CCTGTGTGGGCGAACTGT 59.889 61.111 0.00 0.00 0.00 3.55
372 373 1.525995 CCTGTGTGGGCGAACTGTT 60.526 57.895 0.00 0.00 0.00 3.16
373 374 0.250124 CCTGTGTGGGCGAACTGTTA 60.250 55.000 0.00 0.00 0.00 2.41
374 375 1.588674 CTGTGTGGGCGAACTGTTAA 58.411 50.000 0.00 0.00 0.00 2.01
375 376 1.944024 CTGTGTGGGCGAACTGTTAAA 59.056 47.619 0.00 0.00 0.00 1.52
376 377 1.671845 TGTGTGGGCGAACTGTTAAAC 59.328 47.619 0.00 0.00 0.00 2.01
377 378 0.938713 TGTGGGCGAACTGTTAAACG 59.061 50.000 0.00 0.00 0.00 3.60
382 383 1.933457 GCGAACTGTTAAACGCTCAC 58.067 50.000 15.18 0.00 46.06 3.51
383 384 1.259507 GCGAACTGTTAAACGCTCACA 59.740 47.619 15.18 0.00 46.06 3.58
384 385 2.887733 CGAACTGTTAAACGCTCACAC 58.112 47.619 0.00 0.00 0.00 3.82
385 386 2.283086 CGAACTGTTAAACGCTCACACA 59.717 45.455 0.00 0.00 0.00 3.72
386 387 3.059868 CGAACTGTTAAACGCTCACACAT 60.060 43.478 0.00 0.00 0.00 3.21
387 388 4.455124 GAACTGTTAAACGCTCACACATC 58.545 43.478 0.00 0.00 0.00 3.06
388 389 2.475111 ACTGTTAAACGCTCACACATCG 59.525 45.455 0.00 0.00 0.00 3.84
389 390 1.795872 TGTTAAACGCTCACACATCGG 59.204 47.619 0.00 0.00 0.00 4.18
390 391 1.796459 GTTAAACGCTCACACATCGGT 59.204 47.619 0.00 0.00 0.00 4.69
391 392 1.705256 TAAACGCTCACACATCGGTC 58.295 50.000 0.00 0.00 0.00 4.79
392 393 0.949105 AAACGCTCACACATCGGTCC 60.949 55.000 0.00 0.00 0.00 4.46
393 394 2.509336 CGCTCACACATCGGTCCC 60.509 66.667 0.00 0.00 0.00 4.46
394 395 2.982130 GCTCACACATCGGTCCCT 59.018 61.111 0.00 0.00 0.00 4.20
395 396 1.153549 GCTCACACATCGGTCCCTC 60.154 63.158 0.00 0.00 0.00 4.30
396 397 1.517832 CTCACACATCGGTCCCTCC 59.482 63.158 0.00 0.00 0.00 4.30
405 406 3.144285 GGTCCCTCCGTGTGTGAA 58.856 61.111 0.00 0.00 0.00 3.18
406 407 1.448497 GGTCCCTCCGTGTGTGAAA 59.552 57.895 0.00 0.00 0.00 2.69
407 408 0.179040 GGTCCCTCCGTGTGTGAAAA 60.179 55.000 0.00 0.00 0.00 2.29
408 409 0.942252 GTCCCTCCGTGTGTGAAAAC 59.058 55.000 0.00 0.00 0.00 2.43
409 410 0.531090 TCCCTCCGTGTGTGAAAACG 60.531 55.000 0.00 0.00 39.48 3.60
413 414 4.864248 CGTGTGTGAAAACGGACG 57.136 55.556 0.00 0.00 36.17 4.79
414 415 2.000587 CGTGTGTGAAAACGGACGT 58.999 52.632 0.00 0.00 36.17 4.34
415 416 0.314738 CGTGTGTGAAAACGGACGTG 60.315 55.000 0.00 0.00 36.17 4.49
416 417 0.722848 GTGTGTGAAAACGGACGTGT 59.277 50.000 0.00 0.00 0.00 4.49
417 418 0.722282 TGTGTGAAAACGGACGTGTG 59.278 50.000 0.00 0.00 0.00 3.82
418 419 1.000884 GTGTGAAAACGGACGTGTGA 58.999 50.000 0.00 0.00 0.00 3.58
419 420 1.394227 GTGTGAAAACGGACGTGTGAA 59.606 47.619 0.00 0.00 0.00 3.18
420 421 1.394227 TGTGAAAACGGACGTGTGAAC 59.606 47.619 0.00 0.00 0.00 3.18
421 422 0.646381 TGAAAACGGACGTGTGAACG 59.354 50.000 0.00 0.00 39.31 3.95
422 423 0.922717 GAAAACGGACGTGTGAACGA 59.077 50.000 5.12 0.00 36.85 3.85
423 424 0.646895 AAAACGGACGTGTGAACGAC 59.353 50.000 5.12 0.00 36.85 4.34
424 425 1.147557 AAACGGACGTGTGAACGACC 61.148 55.000 5.12 7.45 42.67 4.79
426 427 2.332514 GGACGTGTGAACGACCGA 59.667 61.111 5.12 0.00 38.05 4.69
427 428 1.299316 GGACGTGTGAACGACCGAA 60.299 57.895 5.12 0.00 38.05 4.30
428 429 0.665369 GGACGTGTGAACGACCGAAT 60.665 55.000 5.12 0.00 38.05 3.34
429 430 1.401409 GGACGTGTGAACGACCGAATA 60.401 52.381 5.12 0.00 38.05 1.75
430 431 2.318578 GACGTGTGAACGACCGAATAA 58.681 47.619 5.12 0.00 36.85 1.40
431 432 2.725723 GACGTGTGAACGACCGAATAAA 59.274 45.455 5.12 0.00 36.85 1.40
432 433 3.319755 ACGTGTGAACGACCGAATAAAT 58.680 40.909 5.12 0.00 36.85 1.40
433 434 3.122278 ACGTGTGAACGACCGAATAAATG 59.878 43.478 5.12 0.00 36.85 2.32
434 435 3.413558 GTGTGAACGACCGAATAAATGC 58.586 45.455 0.00 0.00 0.00 3.56
435 436 2.417239 TGTGAACGACCGAATAAATGCC 59.583 45.455 0.00 0.00 0.00 4.40
436 437 2.011222 TGAACGACCGAATAAATGCCC 58.989 47.619 0.00 0.00 0.00 5.36
437 438 2.011222 GAACGACCGAATAAATGCCCA 58.989 47.619 0.00 0.00 0.00 5.36
438 439 1.375551 ACGACCGAATAAATGCCCAC 58.624 50.000 0.00 0.00 0.00 4.61
439 440 1.339247 ACGACCGAATAAATGCCCACA 60.339 47.619 0.00 0.00 0.00 4.17
440 441 1.063469 CGACCGAATAAATGCCCACAC 59.937 52.381 0.00 0.00 0.00 3.82
441 442 2.088423 GACCGAATAAATGCCCACACA 58.912 47.619 0.00 0.00 0.00 3.72
442 443 2.091541 ACCGAATAAATGCCCACACAG 58.908 47.619 0.00 0.00 0.00 3.66
443 444 1.202290 CCGAATAAATGCCCACACAGC 60.202 52.381 0.00 0.00 0.00 4.40
444 445 1.472082 CGAATAAATGCCCACACAGCA 59.528 47.619 0.00 0.00 45.94 4.41
445 446 2.478370 CGAATAAATGCCCACACAGCAG 60.478 50.000 0.00 0.00 44.90 4.24
446 447 0.819582 ATAAATGCCCACACAGCAGC 59.180 50.000 0.00 0.00 44.90 5.25
447 448 1.250154 TAAATGCCCACACAGCAGCC 61.250 55.000 0.00 0.00 44.90 4.85
451 452 4.275508 CCCACACAGCAGCCCAGT 62.276 66.667 0.00 0.00 0.00 4.00
452 453 2.670934 CCACACAGCAGCCCAGTC 60.671 66.667 0.00 0.00 0.00 3.51
453 454 2.670934 CACACAGCAGCCCAGTCC 60.671 66.667 0.00 0.00 0.00 3.85
454 455 2.851102 ACACAGCAGCCCAGTCCT 60.851 61.111 0.00 0.00 0.00 3.85
455 456 1.536418 ACACAGCAGCCCAGTCCTA 60.536 57.895 0.00 0.00 0.00 2.94
456 457 1.078848 CACAGCAGCCCAGTCCTAC 60.079 63.158 0.00 0.00 0.00 3.18
457 458 1.536418 ACAGCAGCCCAGTCCTACA 60.536 57.895 0.00 0.00 0.00 2.74
458 459 0.911525 ACAGCAGCCCAGTCCTACAT 60.912 55.000 0.00 0.00 0.00 2.29
459 460 0.463295 CAGCAGCCCAGTCCTACATG 60.463 60.000 0.00 0.00 0.00 3.21
460 461 1.153086 GCAGCCCAGTCCTACATGG 60.153 63.158 0.00 0.00 36.27 3.66
461 462 1.153086 CAGCCCAGTCCTACATGGC 60.153 63.158 0.00 0.00 37.32 4.40
462 463 1.616327 AGCCCAGTCCTACATGGCA 60.616 57.895 11.02 0.00 38.85 4.92
463 464 1.452108 GCCCAGTCCTACATGGCAC 60.452 63.158 0.00 0.00 37.11 5.01
464 465 1.224592 CCCAGTCCTACATGGCACC 59.775 63.158 0.00 0.00 35.10 5.01
465 466 1.561769 CCCAGTCCTACATGGCACCA 61.562 60.000 0.00 0.00 35.10 4.17
466 467 0.548031 CCAGTCCTACATGGCACCAT 59.452 55.000 0.00 0.00 37.08 3.55
467 468 1.768275 CCAGTCCTACATGGCACCATA 59.232 52.381 0.89 0.00 34.91 2.74
468 469 2.172505 CCAGTCCTACATGGCACCATAA 59.827 50.000 0.89 0.00 34.91 1.90
469 470 3.371487 CCAGTCCTACATGGCACCATAAA 60.371 47.826 0.89 0.00 34.91 1.40
470 471 4.464008 CAGTCCTACATGGCACCATAAAT 58.536 43.478 0.89 0.00 34.91 1.40
471 472 5.456042 CCAGTCCTACATGGCACCATAAATA 60.456 44.000 0.89 0.00 34.91 1.40
472 473 6.240894 CAGTCCTACATGGCACCATAAATAT 58.759 40.000 0.89 0.00 34.91 1.28
473 474 6.149973 CAGTCCTACATGGCACCATAAATATG 59.850 42.308 0.89 0.00 34.91 1.78
474 475 5.009631 TCCTACATGGCACCATAAATATGC 58.990 41.667 0.89 0.00 38.68 3.14
483 484 6.289745 GCACCATAAATATGCCAACATTTG 57.710 37.500 0.00 0.00 37.74 2.32
484 485 5.816777 GCACCATAAATATGCCAACATTTGT 59.183 36.000 0.00 0.00 37.74 2.83
485 486 6.238157 GCACCATAAATATGCCAACATTTGTG 60.238 38.462 5.45 5.45 37.74 3.33
486 487 5.816777 ACCATAAATATGCCAACATTTGTGC 59.183 36.000 6.44 0.00 37.74 4.57
487 488 5.816258 CCATAAATATGCCAACATTTGTGCA 59.184 36.000 6.44 0.00 39.77 4.57
488 489 6.315642 CCATAAATATGCCAACATTTGTGCAA 59.684 34.615 0.00 0.00 39.22 4.08
489 490 5.610235 AAATATGCCAACATTTGTGCAAC 57.390 34.783 0.00 0.00 39.22 4.17
490 491 1.881591 ATGCCAACATTTGTGCAACC 58.118 45.000 0.00 0.00 39.22 3.77
491 492 0.538584 TGCCAACATTTGTGCAACCA 59.461 45.000 0.00 0.00 35.12 3.67
492 493 0.936600 GCCAACATTTGTGCAACCAC 59.063 50.000 0.00 0.00 42.40 4.16
493 494 6.248049 TATGCCAACATTTGTGCAACCACA 62.248 41.667 0.00 0.00 42.63 4.17
511 512 3.761657 CACAAATGGATGTGGATTCACG 58.238 45.455 0.00 0.00 45.47 4.35
512 513 2.164219 ACAAATGGATGTGGATTCACGC 59.836 45.455 0.00 0.00 46.42 5.34
513 514 1.016627 AATGGATGTGGATTCACGCG 58.983 50.000 3.53 3.53 46.42 6.01
514 515 0.107703 ATGGATGTGGATTCACGCGT 60.108 50.000 5.58 5.58 46.42 6.01
515 516 1.018752 TGGATGTGGATTCACGCGTG 61.019 55.000 32.76 32.76 46.42 5.34
516 517 1.019278 GGATGTGGATTCACGCGTGT 61.019 55.000 35.74 20.52 46.42 4.49
517 518 0.095245 GATGTGGATTCACGCGTGTG 59.905 55.000 35.74 22.93 46.42 3.82
518 519 1.298157 ATGTGGATTCACGCGTGTGG 61.298 55.000 35.74 14.10 46.42 4.17
519 520 2.358125 TGGATTCACGCGTGTGGG 60.358 61.111 35.74 13.70 46.42 4.61
520 521 3.799755 GGATTCACGCGTGTGGGC 61.800 66.667 35.74 22.99 46.42 5.36
536 537 3.430862 GCGAGATGCAAACGCCCA 61.431 61.111 19.47 0.00 45.35 5.36
537 538 2.480555 CGAGATGCAAACGCCCAC 59.519 61.111 0.00 0.00 0.00 4.61
538 539 2.324330 CGAGATGCAAACGCCCACA 61.324 57.895 0.00 0.00 0.00 4.17
539 540 1.210155 GAGATGCAAACGCCCACAC 59.790 57.895 0.00 0.00 0.00 3.82
540 541 2.200170 GAGATGCAAACGCCCACACC 62.200 60.000 0.00 0.00 0.00 4.16
541 542 2.203480 ATGCAAACGCCCACACCT 60.203 55.556 0.00 0.00 0.00 4.00
542 543 2.476534 GATGCAAACGCCCACACCTG 62.477 60.000 0.00 0.00 0.00 4.00
543 544 3.216292 GCAAACGCCCACACCTGT 61.216 61.111 0.00 0.00 0.00 4.00
544 545 2.721231 CAAACGCCCACACCTGTG 59.279 61.111 0.00 0.00 45.23 3.66
552 553 3.966215 CACACCTGTGGGCGTTAG 58.034 61.111 1.91 0.00 42.10 2.34
553 554 1.070786 CACACCTGTGGGCGTTAGT 59.929 57.895 1.91 0.00 42.10 2.24
554 555 1.070786 ACACCTGTGGGCGTTAGTG 59.929 57.895 1.91 0.00 35.63 2.74
555 556 1.070786 CACCTGTGGGCGTTAGTGT 59.929 57.895 0.00 0.00 35.63 3.55
556 557 0.534203 CACCTGTGGGCGTTAGTGTT 60.534 55.000 0.00 0.00 35.63 3.32
557 558 0.181824 ACCTGTGGGCGTTAGTGTTT 59.818 50.000 0.00 0.00 35.63 2.83
558 559 0.872388 CCTGTGGGCGTTAGTGTTTC 59.128 55.000 0.00 0.00 0.00 2.78
559 560 1.588674 CTGTGGGCGTTAGTGTTTCA 58.411 50.000 0.00 0.00 0.00 2.69
560 561 1.944024 CTGTGGGCGTTAGTGTTTCAA 59.056 47.619 0.00 0.00 0.00 2.69
561 562 2.552315 CTGTGGGCGTTAGTGTTTCAAT 59.448 45.455 0.00 0.00 0.00 2.57
562 563 3.741249 TGTGGGCGTTAGTGTTTCAATA 58.259 40.909 0.00 0.00 0.00 1.90
563 564 4.135306 TGTGGGCGTTAGTGTTTCAATAA 58.865 39.130 0.00 0.00 0.00 1.40
564 565 4.762765 TGTGGGCGTTAGTGTTTCAATAAT 59.237 37.500 0.00 0.00 0.00 1.28
565 566 5.106475 TGTGGGCGTTAGTGTTTCAATAATC 60.106 40.000 0.00 0.00 0.00 1.75
566 567 4.396790 TGGGCGTTAGTGTTTCAATAATCC 59.603 41.667 0.00 0.00 0.00 3.01
567 568 4.396790 GGGCGTTAGTGTTTCAATAATCCA 59.603 41.667 10.59 0.00 0.00 3.41
568 569 5.106078 GGGCGTTAGTGTTTCAATAATCCAA 60.106 40.000 10.59 0.00 0.00 3.53
569 570 6.405397 GGGCGTTAGTGTTTCAATAATCCAAT 60.405 38.462 10.59 0.00 0.00 3.16
570 571 6.691388 GGCGTTAGTGTTTCAATAATCCAATC 59.309 38.462 0.00 0.00 0.00 2.67
571 572 7.247728 GCGTTAGTGTTTCAATAATCCAATCA 58.752 34.615 0.00 0.00 0.00 2.57
572 573 7.429340 GCGTTAGTGTTTCAATAATCCAATCAG 59.571 37.037 0.00 0.00 0.00 2.90
573 574 7.429340 CGTTAGTGTTTCAATAATCCAATCAGC 59.571 37.037 0.00 0.00 0.00 4.26
574 575 6.839124 AGTGTTTCAATAATCCAATCAGCA 57.161 33.333 0.00 0.00 0.00 4.41
575 576 6.624423 AGTGTTTCAATAATCCAATCAGCAC 58.376 36.000 0.00 0.00 0.00 4.40
576 577 5.807011 GTGTTTCAATAATCCAATCAGCACC 59.193 40.000 0.00 0.00 0.00 5.01
577 578 5.716228 TGTTTCAATAATCCAATCAGCACCT 59.284 36.000 0.00 0.00 0.00 4.00
578 579 5.840243 TTCAATAATCCAATCAGCACCTG 57.160 39.130 0.00 0.00 0.00 4.00
579 580 5.114764 TCAATAATCCAATCAGCACCTGA 57.885 39.130 0.00 0.00 44.99 3.86
580 581 4.883585 TCAATAATCCAATCAGCACCTGAC 59.116 41.667 0.00 0.00 43.63 3.51
581 582 2.885135 AATCCAATCAGCACCTGACA 57.115 45.000 0.00 0.00 43.63 3.58
582 583 2.885135 ATCCAATCAGCACCTGACAA 57.115 45.000 0.00 0.00 43.63 3.18
583 584 2.189594 TCCAATCAGCACCTGACAAG 57.810 50.000 0.00 0.00 43.63 3.16
584 585 1.421268 TCCAATCAGCACCTGACAAGT 59.579 47.619 0.00 0.00 43.63 3.16
585 586 1.808945 CCAATCAGCACCTGACAAGTC 59.191 52.381 0.00 0.00 43.63 3.01
586 587 2.497138 CAATCAGCACCTGACAAGTCA 58.503 47.619 2.56 2.56 43.63 3.41
587 588 2.175878 ATCAGCACCTGACAAGTCAC 57.824 50.000 0.00 0.00 43.63 3.67
588 589 0.829990 TCAGCACCTGACAAGTCACA 59.170 50.000 0.00 0.00 35.39 3.58
589 590 1.209261 TCAGCACCTGACAAGTCACAA 59.791 47.619 0.00 0.00 35.39 3.33
590 591 2.016318 CAGCACCTGACAAGTCACAAA 58.984 47.619 0.00 0.00 35.46 2.83
591 592 2.017049 AGCACCTGACAAGTCACAAAC 58.983 47.619 0.00 0.00 35.46 2.93
592 593 1.268032 GCACCTGACAAGTCACAAACG 60.268 52.381 0.00 0.00 35.46 3.60
593 594 1.014352 ACCTGACAAGTCACAAACGC 58.986 50.000 0.00 0.00 35.46 4.84
594 595 1.299541 CCTGACAAGTCACAAACGCT 58.700 50.000 0.00 0.00 35.46 5.07
595 596 1.261619 CCTGACAAGTCACAAACGCTC 59.738 52.381 0.00 0.00 35.46 5.03
596 597 2.205074 CTGACAAGTCACAAACGCTCT 58.795 47.619 0.00 0.00 35.46 4.09
597 598 1.933181 TGACAAGTCACAAACGCTCTG 59.067 47.619 0.00 0.00 34.14 3.35
598 599 0.657840 ACAAGTCACAAACGCTCTGC 59.342 50.000 0.00 0.00 0.00 4.26
599 600 0.657312 CAAGTCACAAACGCTCTGCA 59.343 50.000 0.00 0.00 0.00 4.41
600 601 1.063912 CAAGTCACAAACGCTCTGCAA 59.936 47.619 0.00 0.00 0.00 4.08
601 602 1.378531 AGTCACAAACGCTCTGCAAA 58.621 45.000 0.00 0.00 0.00 3.68
602 603 1.742831 AGTCACAAACGCTCTGCAAAA 59.257 42.857 0.00 0.00 0.00 2.44
603 604 1.846175 GTCACAAACGCTCTGCAAAAC 59.154 47.619 0.00 0.00 0.00 2.43
604 605 1.199624 CACAAACGCTCTGCAAAACC 58.800 50.000 0.00 0.00 0.00 3.27
605 606 0.102300 ACAAACGCTCTGCAAAACCC 59.898 50.000 0.00 0.00 0.00 4.11
606 607 0.597377 CAAACGCTCTGCAAAACCCC 60.597 55.000 0.00 0.00 0.00 4.95
607 608 1.744320 AAACGCTCTGCAAAACCCCC 61.744 55.000 0.00 0.00 0.00 5.40
608 609 2.282462 CGCTCTGCAAAACCCCCT 60.282 61.111 0.00 0.00 0.00 4.79
609 610 1.002624 CGCTCTGCAAAACCCCCTA 60.003 57.895 0.00 0.00 0.00 3.53
610 611 0.394352 CGCTCTGCAAAACCCCCTAT 60.394 55.000 0.00 0.00 0.00 2.57
611 612 1.852633 GCTCTGCAAAACCCCCTATT 58.147 50.000 0.00 0.00 0.00 1.73
612 613 2.682563 CGCTCTGCAAAACCCCCTATTA 60.683 50.000 0.00 0.00 0.00 0.98
613 614 3.361786 GCTCTGCAAAACCCCCTATTAA 58.638 45.455 0.00 0.00 0.00 1.40
614 615 3.960755 GCTCTGCAAAACCCCCTATTAAT 59.039 43.478 0.00 0.00 0.00 1.40
615 616 4.038042 GCTCTGCAAAACCCCCTATTAATC 59.962 45.833 0.00 0.00 0.00 1.75
616 617 4.542697 TCTGCAAAACCCCCTATTAATCC 58.457 43.478 0.00 0.00 0.00 3.01
617 618 3.292460 TGCAAAACCCCCTATTAATCCG 58.708 45.455 0.00 0.00 0.00 4.18
618 619 3.293337 GCAAAACCCCCTATTAATCCGT 58.707 45.455 0.00 0.00 0.00 4.69
619 620 4.079901 TGCAAAACCCCCTATTAATCCGTA 60.080 41.667 0.00 0.00 0.00 4.02
620 621 4.888823 GCAAAACCCCCTATTAATCCGTAA 59.111 41.667 0.00 0.00 0.00 3.18
621 622 5.360429 GCAAAACCCCCTATTAATCCGTAAA 59.640 40.000 0.00 0.00 0.00 2.01
622 623 6.681120 GCAAAACCCCCTATTAATCCGTAAAC 60.681 42.308 0.00 0.00 0.00 2.01
623 624 5.713760 AACCCCCTATTAATCCGTAAACA 57.286 39.130 0.00 0.00 0.00 2.83
624 625 5.917545 ACCCCCTATTAATCCGTAAACAT 57.082 39.130 0.00 0.00 0.00 2.71
625 626 7.391388 AACCCCCTATTAATCCGTAAACATA 57.609 36.000 0.00 0.00 0.00 2.29
626 627 7.012661 ACCCCCTATTAATCCGTAAACATAG 57.987 40.000 0.00 0.00 0.00 2.23
627 628 5.878669 CCCCCTATTAATCCGTAAACATAGC 59.121 44.000 0.00 0.00 0.00 2.97
628 629 6.469410 CCCCTATTAATCCGTAAACATAGCA 58.531 40.000 0.00 0.00 0.00 3.49
629 630 7.110155 CCCCTATTAATCCGTAAACATAGCAT 58.890 38.462 0.00 0.00 0.00 3.79
630 631 7.610305 CCCCTATTAATCCGTAAACATAGCATT 59.390 37.037 0.00 0.00 0.00 3.56
631 632 8.450964 CCCTATTAATCCGTAAACATAGCATTG 58.549 37.037 0.00 0.00 0.00 2.82
632 633 8.999431 CCTATTAATCCGTAAACATAGCATTGT 58.001 33.333 0.00 0.00 0.00 2.71
702 703 3.057174 ACTCAGATCCGTGTGTCTCTTTC 60.057 47.826 0.00 0.00 0.00 2.62
733 734 3.492309 GCTCACCATCTCACGATCATCTT 60.492 47.826 0.00 0.00 0.00 2.40
762 763 2.094894 CGAAAGCCTACACAATCTGCAG 59.905 50.000 7.63 7.63 0.00 4.41
808 809 1.940613 GTCAGAGTGCTGGTTCGTTTT 59.059 47.619 0.00 0.00 42.53 2.43
821 822 4.396790 TGGTTCGTTTTTGCTGTAAAGACT 59.603 37.500 9.49 0.00 32.71 3.24
863 864 5.004535 ACTTCTTTATTCGCTTCGATTCGAC 59.995 40.000 8.55 0.00 34.89 4.20
864 865 3.481028 TCTTTATTCGCTTCGATTCGACG 59.519 43.478 8.55 10.31 34.89 5.12
865 866 1.750351 TATTCGCTTCGATTCGACGG 58.250 50.000 8.55 6.10 34.89 4.79
866 867 1.480219 ATTCGCTTCGATTCGACGGC 61.480 55.000 8.55 14.40 34.89 5.68
889 890 4.322049 CCGGTCTGGATCTATACATTCCAC 60.322 50.000 0.00 0.00 42.00 4.02
902 903 3.790416 TTCCACCACCTGCAGTGCC 62.790 63.158 13.72 0.00 45.83 5.01
911 912 2.903350 TGCAGTGCCAGTGTGCAG 60.903 61.111 13.72 0.00 42.20 4.41
986 987 5.479306 TCATGACACTAGGTGCTTAAGTTC 58.521 41.667 4.02 0.00 36.98 3.01
1005 1006 1.364626 CGCAAGTGACTCAGATGGCC 61.365 60.000 0.00 0.00 0.00 5.36
1439 1443 0.177604 CTGCTGGAGGTGATGAGGAC 59.822 60.000 0.00 0.00 0.00 3.85
1511 1521 2.125512 CCACGGCCTGCTCTACAC 60.126 66.667 0.00 0.00 0.00 2.90
1636 1650 8.494016 AGTAACTAATTAAGCCATGAGACAAC 57.506 34.615 0.00 0.00 0.00 3.32
1704 1718 8.207252 CGCCAGCGAATTAACAAAATTATTATG 58.793 33.333 6.06 0.00 42.83 1.90
1825 1839 6.062258 TGCTACCTTTTAGCTTCTTACCAT 57.938 37.500 0.00 0.00 40.95 3.55
1920 1948 2.584492 GCCTTTGCCATGATTGTACC 57.416 50.000 0.00 0.00 0.00 3.34
1921 1949 2.102578 GCCTTTGCCATGATTGTACCT 58.897 47.619 0.00 0.00 0.00 3.08
1922 1950 3.287222 GCCTTTGCCATGATTGTACCTA 58.713 45.455 0.00 0.00 0.00 3.08
1963 1991 1.004560 TTGGCAGCAGAACGAGGAG 60.005 57.895 0.00 0.00 0.00 3.69
2830 2872 8.427276 ACTGTGATGACATTACTCATATGATGT 58.573 33.333 5.72 7.63 35.57 3.06
2907 2949 0.196888 TATCCTCATCCCTGGGGCAT 59.803 55.000 14.00 0.00 43.46 4.40
2965 3007 8.542497 TTATCGCTGATTTACTACAACTTTGT 57.458 30.769 0.00 0.00 44.86 2.83
2973 3015 8.205512 TGATTTACTACAACTTTGTGGAGTACA 58.794 33.333 11.95 3.61 41.55 2.90
3018 3060 3.505386 TGAACAAGGCAACCAACCATAT 58.495 40.909 0.00 0.00 37.17 1.78
3025 3067 8.317776 ACAAGGCAACCAACCATATATAAATT 57.682 30.769 0.00 0.00 37.17 1.82
3026 3068 8.767436 ACAAGGCAACCAACCATATATAAATTT 58.233 29.630 0.00 0.00 37.17 1.82
3027 3069 9.260002 CAAGGCAACCAACCATATATAAATTTC 57.740 33.333 0.00 0.00 37.17 2.17
3028 3070 8.782137 AGGCAACCAACCATATATAAATTTCT 57.218 30.769 0.00 0.00 37.17 2.52
3029 3071 9.875708 AGGCAACCAACCATATATAAATTTCTA 57.124 29.630 0.00 0.00 37.17 2.10
3102 3144 8.349983 ACAAAAATAACAGTCCATCAACACTAC 58.650 33.333 0.00 0.00 0.00 2.73
3129 3171 2.028203 CAGGCCGGTTTGATTTTTCCAT 60.028 45.455 1.90 0.00 0.00 3.41
3157 3200 2.281498 GGTTGCGCTTGTTGTTCTTTTC 59.719 45.455 9.73 0.00 0.00 2.29
3221 3264 6.653989 AGGTTTATGTAGGAATTGGAGTCTG 58.346 40.000 0.00 0.00 0.00 3.51
3230 3273 3.610911 GAATTGGAGTCTGGGGTTACAG 58.389 50.000 0.00 0.00 39.84 2.74
3237 3280 3.171528 AGTCTGGGGTTACAGGTTCTAC 58.828 50.000 0.00 0.00 38.98 2.59
3244 3287 3.367806 GGGTTACAGGTTCTACTTCGGTC 60.368 52.174 0.00 0.00 0.00 4.79
3247 3290 2.872732 ACAGGTTCTACTTCGGTCAGA 58.127 47.619 0.00 0.00 0.00 3.27
3248 3291 2.820787 ACAGGTTCTACTTCGGTCAGAG 59.179 50.000 0.00 0.00 0.00 3.35
3249 3292 1.819903 AGGTTCTACTTCGGTCAGAGC 59.180 52.381 0.00 0.00 0.00 4.09
3250 3293 1.135053 GGTTCTACTTCGGTCAGAGCC 60.135 57.143 0.00 0.00 33.36 4.70
3287 3331 3.050619 GTTGTCGTGTCTTGTACTCCAG 58.949 50.000 0.00 0.00 0.00 3.86
3289 3333 1.612463 GTCGTGTCTTGTACTCCAGGT 59.388 52.381 0.00 0.00 0.00 4.00
3305 3349 2.829384 GGTCTTCCAGCCCACCACA 61.829 63.158 0.00 0.00 0.00 4.17
3345 3389 3.559069 AGTTGATTGGCCCATGACATAG 58.441 45.455 0.00 0.00 0.00 2.23
3452 3497 4.069232 CGGCTGCTTCCTGGTCGA 62.069 66.667 0.00 0.00 0.00 4.20
3470 3515 1.077930 ATGTTGATCTGCTGGCGCT 60.078 52.632 7.64 0.00 36.97 5.92
3471 3516 0.178767 ATGTTGATCTGCTGGCGCTA 59.821 50.000 7.64 0.00 36.97 4.26
3505 3550 1.070786 TCGAAGCCGAAGCCAGTTT 59.929 52.632 0.00 0.00 42.51 2.66
3532 3577 4.922206 AGCTCCCATGTTCTTGAATTGTA 58.078 39.130 0.00 0.00 0.00 2.41
3556 3601 7.526142 AGATGTAGATAGCCAATCTTTACGA 57.474 36.000 4.62 0.00 42.62 3.43
3569 3614 4.188247 TCTTTACGACAAGTCATCCCAG 57.812 45.455 0.72 0.00 0.00 4.45
3644 3690 1.093159 CAGAGCTTTGGTCATGAGGC 58.907 55.000 0.00 0.00 31.89 4.70
3649 3695 1.522668 CTTTGGTCATGAGGCGACAA 58.477 50.000 0.00 0.00 34.97 3.18
3676 3722 2.673368 GGCTCTAACACAACCAATCGAG 59.327 50.000 0.00 0.00 0.00 4.04
3680 3726 4.951254 TCTAACACAACCAATCGAGTCAA 58.049 39.130 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.369904 CCATTTAAACCAAGGAAATTCACATAG 57.630 33.333 0.00 0.00 0.00 2.23
3 4 9.094578 TCCATTTAAACCAAGGAAATTCACATA 57.905 29.630 0.00 0.00 0.00 2.29
4 5 7.972301 TCCATTTAAACCAAGGAAATTCACAT 58.028 30.769 0.00 0.00 0.00 3.21
5 6 7.366847 TCCATTTAAACCAAGGAAATTCACA 57.633 32.000 0.00 0.00 0.00 3.58
6 7 8.314021 AGATCCATTTAAACCAAGGAAATTCAC 58.686 33.333 0.00 0.00 31.17 3.18
7 8 8.434589 AGATCCATTTAAACCAAGGAAATTCA 57.565 30.769 0.00 0.00 31.17 2.57
10 11 9.768215 TCTTAGATCCATTTAAACCAAGGAAAT 57.232 29.630 0.00 0.00 31.17 2.17
11 12 9.768215 ATCTTAGATCCATTTAAACCAAGGAAA 57.232 29.630 0.00 0.00 31.17 3.13
12 13 9.408648 GATCTTAGATCCATTTAAACCAAGGAA 57.591 33.333 10.93 0.00 31.17 3.36
13 14 7.998964 GGATCTTAGATCCATTTAAACCAAGGA 59.001 37.037 30.30 0.00 38.09 3.36
14 15 7.779798 TGGATCTTAGATCCATTTAAACCAAGG 59.220 37.037 33.07 0.00 42.81 3.61
15 16 8.752005 TGGATCTTAGATCCATTTAAACCAAG 57.248 34.615 33.07 0.00 42.81 3.61
27 28 7.951347 AATAAATGGCATGGATCTTAGATCC 57.049 36.000 29.06 29.06 38.66 3.36
30 31 9.866655 AACTAAATAAATGGCATGGATCTTAGA 57.133 29.630 16.84 0.00 0.00 2.10
31 32 9.903682 CAACTAAATAAATGGCATGGATCTTAG 57.096 33.333 0.00 7.73 0.00 2.18
32 33 9.639563 TCAACTAAATAAATGGCATGGATCTTA 57.360 29.630 0.00 0.00 0.00 2.10
33 34 8.537728 TCAACTAAATAAATGGCATGGATCTT 57.462 30.769 0.00 0.00 0.00 2.40
34 35 7.781693 ACTCAACTAAATAAATGGCATGGATCT 59.218 33.333 0.00 0.00 0.00 2.75
35 36 7.945134 ACTCAACTAAATAAATGGCATGGATC 58.055 34.615 0.00 0.00 0.00 3.36
36 37 7.902920 ACTCAACTAAATAAATGGCATGGAT 57.097 32.000 0.00 0.00 0.00 3.41
37 38 7.716799 AACTCAACTAAATAAATGGCATGGA 57.283 32.000 0.00 0.00 0.00 3.41
38 39 9.868277 TTTAACTCAACTAAATAAATGGCATGG 57.132 29.630 0.00 0.00 0.00 3.66
65 66 7.658167 TGTCATTGCATCATGTCATTTCTTTTT 59.342 29.630 0.00 0.00 0.00 1.94
66 67 7.156000 TGTCATTGCATCATGTCATTTCTTTT 58.844 30.769 0.00 0.00 0.00 2.27
67 68 6.693466 TGTCATTGCATCATGTCATTTCTTT 58.307 32.000 0.00 0.00 0.00 2.52
68 69 6.275494 TGTCATTGCATCATGTCATTTCTT 57.725 33.333 0.00 0.00 0.00 2.52
69 70 5.907866 TGTCATTGCATCATGTCATTTCT 57.092 34.783 0.00 0.00 0.00 2.52
70 71 6.954616 TTTGTCATTGCATCATGTCATTTC 57.045 33.333 0.00 0.00 0.00 2.17
71 72 6.183360 GCATTTGTCATTGCATCATGTCATTT 60.183 34.615 0.00 0.00 38.72 2.32
72 73 5.293324 GCATTTGTCATTGCATCATGTCATT 59.707 36.000 0.00 0.00 38.72 2.57
73 74 4.808895 GCATTTGTCATTGCATCATGTCAT 59.191 37.500 0.00 0.00 38.72 3.06
74 75 4.177783 GCATTTGTCATTGCATCATGTCA 58.822 39.130 0.00 0.00 38.72 3.58
75 76 4.177783 TGCATTTGTCATTGCATCATGTC 58.822 39.130 6.83 0.00 43.54 3.06
76 77 4.195225 TGCATTTGTCATTGCATCATGT 57.805 36.364 6.83 0.00 43.54 3.21
82 83 2.789491 TCGTTGCATTTGTCATTGCA 57.211 40.000 6.83 6.83 46.51 4.08
83 84 2.155539 GGTTCGTTGCATTTGTCATTGC 59.844 45.455 0.00 2.16 39.33 3.56
84 85 3.379240 TGGTTCGTTGCATTTGTCATTG 58.621 40.909 0.00 0.00 0.00 2.82
85 86 3.724508 TGGTTCGTTGCATTTGTCATT 57.275 38.095 0.00 0.00 0.00 2.57
86 87 3.724508 TTGGTTCGTTGCATTTGTCAT 57.275 38.095 0.00 0.00 0.00 3.06
87 88 3.182967 GTTTGGTTCGTTGCATTTGTCA 58.817 40.909 0.00 0.00 0.00 3.58
88 89 3.182967 TGTTTGGTTCGTTGCATTTGTC 58.817 40.909 0.00 0.00 0.00 3.18
89 90 3.119316 TCTGTTTGGTTCGTTGCATTTGT 60.119 39.130 0.00 0.00 0.00 2.83
90 91 3.443037 TCTGTTTGGTTCGTTGCATTTG 58.557 40.909 0.00 0.00 0.00 2.32
91 92 3.791973 TCTGTTTGGTTCGTTGCATTT 57.208 38.095 0.00 0.00 0.00 2.32
92 93 3.317711 TGATCTGTTTGGTTCGTTGCATT 59.682 39.130 0.00 0.00 0.00 3.56
93 94 2.884012 TGATCTGTTTGGTTCGTTGCAT 59.116 40.909 0.00 0.00 0.00 3.96
94 95 2.032799 GTGATCTGTTTGGTTCGTTGCA 59.967 45.455 0.00 0.00 0.00 4.08
95 96 2.032799 TGTGATCTGTTTGGTTCGTTGC 59.967 45.455 0.00 0.00 0.00 4.17
96 97 3.961477 TGTGATCTGTTTGGTTCGTTG 57.039 42.857 0.00 0.00 0.00 4.10
97 98 4.024048 GTCATGTGATCTGTTTGGTTCGTT 60.024 41.667 0.00 0.00 0.00 3.85
98 99 3.498397 GTCATGTGATCTGTTTGGTTCGT 59.502 43.478 0.00 0.00 0.00 3.85
99 100 3.423515 CGTCATGTGATCTGTTTGGTTCG 60.424 47.826 0.00 0.00 0.00 3.95
100 101 3.745975 TCGTCATGTGATCTGTTTGGTTC 59.254 43.478 0.00 0.00 0.00 3.62
101 102 3.738982 TCGTCATGTGATCTGTTTGGTT 58.261 40.909 0.00 0.00 0.00 3.67
102 103 3.401033 TCGTCATGTGATCTGTTTGGT 57.599 42.857 0.00 0.00 0.00 3.67
103 104 4.466828 GTTTCGTCATGTGATCTGTTTGG 58.533 43.478 0.00 0.00 0.00 3.28
104 105 4.466828 GGTTTCGTCATGTGATCTGTTTG 58.533 43.478 0.00 0.00 0.00 2.93
105 106 3.502211 GGGTTTCGTCATGTGATCTGTTT 59.498 43.478 0.00 0.00 0.00 2.83
106 107 3.074412 GGGTTTCGTCATGTGATCTGTT 58.926 45.455 0.00 0.00 0.00 3.16
107 108 2.699954 GGGTTTCGTCATGTGATCTGT 58.300 47.619 0.00 0.00 0.00 3.41
108 109 1.660607 CGGGTTTCGTCATGTGATCTG 59.339 52.381 0.00 0.00 0.00 2.90
109 110 1.548719 TCGGGTTTCGTCATGTGATCT 59.451 47.619 0.00 0.00 40.32 2.75
110 111 2.004583 TCGGGTTTCGTCATGTGATC 57.995 50.000 0.00 0.00 40.32 2.92
111 112 2.465860 TTCGGGTTTCGTCATGTGAT 57.534 45.000 0.00 0.00 40.32 3.06
112 113 2.242047 TTTCGGGTTTCGTCATGTGA 57.758 45.000 0.00 0.00 40.32 3.58
113 114 2.603652 GGTTTTCGGGTTTCGTCATGTG 60.604 50.000 0.00 0.00 40.32 3.21
114 115 1.605232 GGTTTTCGGGTTTCGTCATGT 59.395 47.619 0.00 0.00 40.32 3.21
115 116 1.604755 TGGTTTTCGGGTTTCGTCATG 59.395 47.619 0.00 0.00 40.32 3.07
116 117 1.970092 TGGTTTTCGGGTTTCGTCAT 58.030 45.000 0.00 0.00 40.32 3.06
117 118 1.604755 CATGGTTTTCGGGTTTCGTCA 59.395 47.619 0.00 0.00 40.32 4.35
118 119 1.068816 CCATGGTTTTCGGGTTTCGTC 60.069 52.381 2.57 0.00 40.32 4.20
119 120 0.955905 CCATGGTTTTCGGGTTTCGT 59.044 50.000 2.57 0.00 40.32 3.85
120 121 1.240256 TCCATGGTTTTCGGGTTTCG 58.760 50.000 12.58 0.00 40.90 3.46
121 122 2.029380 CCTTCCATGGTTTTCGGGTTTC 60.029 50.000 12.58 0.00 0.00 2.78
122 123 1.967779 CCTTCCATGGTTTTCGGGTTT 59.032 47.619 12.58 0.00 0.00 3.27
123 124 1.627864 CCTTCCATGGTTTTCGGGTT 58.372 50.000 12.58 0.00 0.00 4.11
124 125 0.898326 GCCTTCCATGGTTTTCGGGT 60.898 55.000 12.58 0.00 0.00 5.28
125 126 0.897863 TGCCTTCCATGGTTTTCGGG 60.898 55.000 12.58 7.25 0.00 5.14
126 127 0.965439 TTGCCTTCCATGGTTTTCGG 59.035 50.000 12.58 7.33 0.00 4.30
127 128 1.613437 AGTTGCCTTCCATGGTTTTCG 59.387 47.619 12.58 0.00 0.00 3.46
128 129 2.627699 TCAGTTGCCTTCCATGGTTTTC 59.372 45.455 12.58 0.84 0.00 2.29
129 130 2.676748 TCAGTTGCCTTCCATGGTTTT 58.323 42.857 12.58 0.00 0.00 2.43
130 131 2.380064 TCAGTTGCCTTCCATGGTTT 57.620 45.000 12.58 0.00 0.00 3.27
131 132 2.242043 CTTCAGTTGCCTTCCATGGTT 58.758 47.619 12.58 0.00 0.00 3.67
132 133 1.915141 CTTCAGTTGCCTTCCATGGT 58.085 50.000 12.58 0.00 0.00 3.55
133 134 0.529378 GCTTCAGTTGCCTTCCATGG 59.471 55.000 4.97 4.97 0.00 3.66
134 135 1.471684 GAGCTTCAGTTGCCTTCCATG 59.528 52.381 0.00 0.00 0.00 3.66
135 136 1.615384 GGAGCTTCAGTTGCCTTCCAT 60.615 52.381 0.00 0.00 0.00 3.41
136 137 0.250901 GGAGCTTCAGTTGCCTTCCA 60.251 55.000 0.00 0.00 0.00 3.53
137 138 1.301677 CGGAGCTTCAGTTGCCTTCC 61.302 60.000 0.00 0.00 0.00 3.46
138 139 1.301677 CCGGAGCTTCAGTTGCCTTC 61.302 60.000 0.00 0.00 0.00 3.46
139 140 1.302832 CCGGAGCTTCAGTTGCCTT 60.303 57.895 0.00 0.00 0.00 4.35
140 141 2.348998 CCGGAGCTTCAGTTGCCT 59.651 61.111 0.00 0.00 0.00 4.75
141 142 2.032681 ACCGGAGCTTCAGTTGCC 59.967 61.111 9.46 0.00 0.00 4.52
142 143 0.603975 AAGACCGGAGCTTCAGTTGC 60.604 55.000 9.46 0.00 0.00 4.17
143 144 1.151668 CAAGACCGGAGCTTCAGTTG 58.848 55.000 9.46 0.00 0.00 3.16
144 145 0.035458 CCAAGACCGGAGCTTCAGTT 59.965 55.000 9.46 0.00 0.00 3.16
145 146 1.674057 CCAAGACCGGAGCTTCAGT 59.326 57.895 9.46 0.00 0.00 3.41
146 147 1.078848 CCCAAGACCGGAGCTTCAG 60.079 63.158 9.46 5.05 0.00 3.02
147 148 2.592993 CCCCAAGACCGGAGCTTCA 61.593 63.158 9.46 0.00 0.00 3.02
148 149 2.269241 CCCCAAGACCGGAGCTTC 59.731 66.667 9.46 0.00 0.00 3.86
149 150 4.035102 GCCCCAAGACCGGAGCTT 62.035 66.667 9.46 8.67 0.00 3.74
152 153 4.452733 GACGCCCCAAGACCGGAG 62.453 72.222 9.46 0.00 0.00 4.63
155 156 4.308458 TGTGACGCCCCAAGACCG 62.308 66.667 0.00 0.00 0.00 4.79
156 157 2.668550 GTGTGACGCCCCAAGACC 60.669 66.667 0.00 0.00 0.00 3.85
157 158 1.302511 ATGTGTGACGCCCCAAGAC 60.303 57.895 0.00 0.00 0.00 3.01
158 159 1.302431 CATGTGTGACGCCCCAAGA 60.302 57.895 0.00 0.00 0.00 3.02
159 160 0.321210 TACATGTGTGACGCCCCAAG 60.321 55.000 9.11 0.00 0.00 3.61
160 161 0.326595 ATACATGTGTGACGCCCCAA 59.673 50.000 9.11 0.00 0.00 4.12
161 162 0.107897 GATACATGTGTGACGCCCCA 60.108 55.000 9.11 0.00 0.00 4.96
162 163 0.814010 GGATACATGTGTGACGCCCC 60.814 60.000 9.11 0.00 0.00 5.80
163 164 0.178068 AGGATACATGTGTGACGCCC 59.822 55.000 9.11 0.00 41.41 6.13
164 165 2.470821 GTAGGATACATGTGTGACGCC 58.529 52.381 9.11 0.00 42.43 5.68
176 177 5.183140 AGTTGCCATGTGTTTTGTAGGATAC 59.817 40.000 0.00 0.00 43.42 2.24
177 178 5.182950 CAGTTGCCATGTGTTTTGTAGGATA 59.817 40.000 0.00 0.00 0.00 2.59
178 179 4.022068 CAGTTGCCATGTGTTTTGTAGGAT 60.022 41.667 0.00 0.00 0.00 3.24
179 180 3.317711 CAGTTGCCATGTGTTTTGTAGGA 59.682 43.478 0.00 0.00 0.00 2.94
180 181 3.317711 TCAGTTGCCATGTGTTTTGTAGG 59.682 43.478 0.00 0.00 0.00 3.18
181 182 4.202000 TGTCAGTTGCCATGTGTTTTGTAG 60.202 41.667 0.00 0.00 0.00 2.74
182 183 3.696548 TGTCAGTTGCCATGTGTTTTGTA 59.303 39.130 0.00 0.00 0.00 2.41
183 184 2.495270 TGTCAGTTGCCATGTGTTTTGT 59.505 40.909 0.00 0.00 0.00 2.83
184 185 3.162202 TGTCAGTTGCCATGTGTTTTG 57.838 42.857 0.00 0.00 0.00 2.44
185 186 5.726980 ATATGTCAGTTGCCATGTGTTTT 57.273 34.783 0.00 0.00 0.00 2.43
186 187 5.619757 CGAATATGTCAGTTGCCATGTGTTT 60.620 40.000 0.00 0.00 0.00 2.83
187 188 4.142622 CGAATATGTCAGTTGCCATGTGTT 60.143 41.667 0.00 0.00 0.00 3.32
188 189 3.374988 CGAATATGTCAGTTGCCATGTGT 59.625 43.478 0.00 0.00 0.00 3.72
189 190 3.242837 CCGAATATGTCAGTTGCCATGTG 60.243 47.826 0.00 0.00 0.00 3.21
190 191 2.945008 CCGAATATGTCAGTTGCCATGT 59.055 45.455 0.00 0.00 0.00 3.21
191 192 3.205338 TCCGAATATGTCAGTTGCCATG 58.795 45.455 0.00 0.00 0.00 3.66
192 193 3.558931 TCCGAATATGTCAGTTGCCAT 57.441 42.857 0.00 0.00 0.00 4.40
193 194 3.558931 ATCCGAATATGTCAGTTGCCA 57.441 42.857 0.00 0.00 0.00 4.92
194 195 6.260050 TCTTTTATCCGAATATGTCAGTTGCC 59.740 38.462 0.00 0.00 0.00 4.52
195 196 7.224753 TCTCTTTTATCCGAATATGTCAGTTGC 59.775 37.037 0.00 0.00 0.00 4.17
196 197 8.648557 TCTCTTTTATCCGAATATGTCAGTTG 57.351 34.615 0.00 0.00 0.00 3.16
197 198 8.696374 TCTCTCTTTTATCCGAATATGTCAGTT 58.304 33.333 0.00 0.00 0.00 3.16
198 199 8.239038 TCTCTCTTTTATCCGAATATGTCAGT 57.761 34.615 0.00 0.00 0.00 3.41
199 200 8.356657 ACTCTCTCTTTTATCCGAATATGTCAG 58.643 37.037 0.00 0.00 0.00 3.51
200 201 8.239038 ACTCTCTCTTTTATCCGAATATGTCA 57.761 34.615 0.00 0.00 0.00 3.58
201 202 8.973378 CAACTCTCTCTTTTATCCGAATATGTC 58.027 37.037 0.00 0.00 0.00 3.06
202 203 7.439655 GCAACTCTCTCTTTTATCCGAATATGT 59.560 37.037 0.00 0.00 0.00 2.29
203 204 7.095439 GGCAACTCTCTCTTTTATCCGAATATG 60.095 40.741 0.00 0.00 0.00 1.78
204 205 6.931840 GGCAACTCTCTCTTTTATCCGAATAT 59.068 38.462 0.00 0.00 0.00 1.28
205 206 6.127168 TGGCAACTCTCTCTTTTATCCGAATA 60.127 38.462 0.00 0.00 37.61 1.75
206 207 5.119694 GGCAACTCTCTCTTTTATCCGAAT 58.880 41.667 0.00 0.00 0.00 3.34
207 208 4.020573 TGGCAACTCTCTCTTTTATCCGAA 60.021 41.667 0.00 0.00 37.61 4.30
208 209 3.513912 TGGCAACTCTCTCTTTTATCCGA 59.486 43.478 0.00 0.00 37.61 4.55
209 210 3.861840 TGGCAACTCTCTCTTTTATCCG 58.138 45.455 0.00 0.00 37.61 4.18
210 211 6.558909 CAAATGGCAACTCTCTCTTTTATCC 58.441 40.000 0.00 0.00 37.61 2.59
211 212 6.032717 GCAAATGGCAACTCTCTCTTTTATC 58.967 40.000 0.00 0.00 43.97 1.75
212 213 5.958955 GCAAATGGCAACTCTCTCTTTTAT 58.041 37.500 0.00 0.00 43.97 1.40
213 214 5.376854 GCAAATGGCAACTCTCTCTTTTA 57.623 39.130 0.00 0.00 43.97 1.52
214 215 4.248691 GCAAATGGCAACTCTCTCTTTT 57.751 40.909 0.00 0.00 43.97 2.27
215 216 3.930634 GCAAATGGCAACTCTCTCTTT 57.069 42.857 0.00 0.00 43.97 2.52
235 236 2.289694 ACTGCCCTACTGTGCTTGTAAG 60.290 50.000 0.00 0.00 0.00 2.34
236 237 1.697432 ACTGCCCTACTGTGCTTGTAA 59.303 47.619 0.00 0.00 0.00 2.41
237 238 1.348064 ACTGCCCTACTGTGCTTGTA 58.652 50.000 0.00 0.00 0.00 2.41
238 239 0.474184 AACTGCCCTACTGTGCTTGT 59.526 50.000 0.00 0.00 0.00 3.16
239 240 0.877071 CAACTGCCCTACTGTGCTTG 59.123 55.000 0.00 0.00 0.00 4.01
240 241 0.474184 ACAACTGCCCTACTGTGCTT 59.526 50.000 0.00 0.00 0.00 3.91
241 242 0.035458 GACAACTGCCCTACTGTGCT 59.965 55.000 0.00 0.00 0.00 4.40
242 243 0.250295 TGACAACTGCCCTACTGTGC 60.250 55.000 0.00 0.00 0.00 4.57
243 244 2.079158 CATGACAACTGCCCTACTGTG 58.921 52.381 0.00 0.00 0.00 3.66
244 245 1.699634 ACATGACAACTGCCCTACTGT 59.300 47.619 0.00 0.00 0.00 3.55
245 246 2.479566 ACATGACAACTGCCCTACTG 57.520 50.000 0.00 0.00 0.00 2.74
246 247 2.236395 GGTACATGACAACTGCCCTACT 59.764 50.000 0.00 0.00 0.00 2.57
247 248 2.629051 GGTACATGACAACTGCCCTAC 58.371 52.381 0.00 0.00 0.00 3.18
248 249 1.557832 GGGTACATGACAACTGCCCTA 59.442 52.381 0.00 0.00 0.00 3.53
249 250 0.328258 GGGTACATGACAACTGCCCT 59.672 55.000 0.00 0.00 0.00 5.19
250 251 0.328258 AGGGTACATGACAACTGCCC 59.672 55.000 0.00 0.00 35.04 5.36
251 252 1.453155 CAGGGTACATGACAACTGCC 58.547 55.000 0.00 0.00 30.77 4.85
252 253 0.804989 GCAGGGTACATGACAACTGC 59.195 55.000 16.63 16.63 46.50 4.40
253 254 2.183478 TGCAGGGTACATGACAACTG 57.817 50.000 0.00 3.83 37.53 3.16
254 255 2.949177 TTGCAGGGTACATGACAACT 57.051 45.000 0.00 0.00 0.00 3.16
255 256 3.067461 TGTTTTGCAGGGTACATGACAAC 59.933 43.478 0.00 0.00 0.00 3.32
256 257 3.067461 GTGTTTTGCAGGGTACATGACAA 59.933 43.478 0.00 0.00 0.00 3.18
257 258 2.621055 GTGTTTTGCAGGGTACATGACA 59.379 45.455 0.00 0.00 0.00 3.58
258 259 2.621055 TGTGTTTTGCAGGGTACATGAC 59.379 45.455 0.00 0.00 0.00 3.06
259 260 2.937519 TGTGTTTTGCAGGGTACATGA 58.062 42.857 0.00 0.00 0.00 3.07
260 261 3.577667 CATGTGTTTTGCAGGGTACATG 58.422 45.455 16.42 16.42 39.30 3.21
261 262 2.562298 CCATGTGTTTTGCAGGGTACAT 59.438 45.455 0.00 3.75 33.58 2.29
262 263 1.959985 CCATGTGTTTTGCAGGGTACA 59.040 47.619 0.00 0.00 33.58 2.90
263 264 1.336795 GCCATGTGTTTTGCAGGGTAC 60.337 52.381 0.00 0.00 39.69 3.34
264 265 0.965439 GCCATGTGTTTTGCAGGGTA 59.035 50.000 0.00 0.00 39.69 3.69
265 266 1.047596 TGCCATGTGTTTTGCAGGGT 61.048 50.000 0.00 0.00 39.69 4.34
266 267 0.106335 TTGCCATGTGTTTTGCAGGG 59.894 50.000 0.00 0.00 40.40 4.45
267 268 1.202557 AGTTGCCATGTGTTTTGCAGG 60.203 47.619 0.00 0.00 34.81 4.85
268 269 1.862201 CAGTTGCCATGTGTTTTGCAG 59.138 47.619 0.00 0.00 34.81 4.41
269 270 1.479730 TCAGTTGCCATGTGTTTTGCA 59.520 42.857 0.00 0.00 0.00 4.08
270 271 1.860326 GTCAGTTGCCATGTGTTTTGC 59.140 47.619 0.00 0.00 0.00 3.68
271 272 3.117794 CTGTCAGTTGCCATGTGTTTTG 58.882 45.455 0.00 0.00 0.00 2.44
272 273 2.760092 ACTGTCAGTTGCCATGTGTTTT 59.240 40.909 0.00 0.00 0.00 2.43
273 274 2.378038 ACTGTCAGTTGCCATGTGTTT 58.622 42.857 0.00 0.00 0.00 2.83
274 275 2.057137 ACTGTCAGTTGCCATGTGTT 57.943 45.000 0.00 0.00 0.00 3.32
275 276 2.057137 AACTGTCAGTTGCCATGTGT 57.943 45.000 17.49 0.00 37.00 3.72
276 277 3.117794 CAAAACTGTCAGTTGCCATGTG 58.882 45.455 18.84 7.07 38.66 3.21
277 278 3.023119 TCAAAACTGTCAGTTGCCATGT 58.977 40.909 18.84 0.00 38.66 3.21
278 279 3.067180 ACTCAAAACTGTCAGTTGCCATG 59.933 43.478 18.84 14.56 38.66 3.66
279 280 3.067180 CACTCAAAACTGTCAGTTGCCAT 59.933 43.478 18.84 0.25 38.66 4.40
280 281 2.423185 CACTCAAAACTGTCAGTTGCCA 59.577 45.455 18.84 5.00 38.66 4.92
281 282 2.423538 ACACTCAAAACTGTCAGTTGCC 59.576 45.455 18.84 0.00 38.66 4.52
282 283 3.429085 CACACTCAAAACTGTCAGTTGC 58.571 45.455 18.84 0.00 38.66 4.17
283 284 3.181497 CCCACACTCAAAACTGTCAGTTG 60.181 47.826 18.84 8.56 38.66 3.16
284 285 3.016736 CCCACACTCAAAACTGTCAGTT 58.983 45.455 12.62 12.62 40.80 3.16
285 286 2.238646 TCCCACACTCAAAACTGTCAGT 59.761 45.455 0.00 0.00 0.00 3.41
286 287 2.874701 CTCCCACACTCAAAACTGTCAG 59.125 50.000 0.00 0.00 0.00 3.51
287 288 2.503765 TCTCCCACACTCAAAACTGTCA 59.496 45.455 0.00 0.00 0.00 3.58
288 289 3.134458 CTCTCCCACACTCAAAACTGTC 58.866 50.000 0.00 0.00 0.00 3.51
289 290 2.158755 CCTCTCCCACACTCAAAACTGT 60.159 50.000 0.00 0.00 0.00 3.55
290 291 2.104792 TCCTCTCCCACACTCAAAACTG 59.895 50.000 0.00 0.00 0.00 3.16
291 292 2.370189 CTCCTCTCCCACACTCAAAACT 59.630 50.000 0.00 0.00 0.00 2.66
292 293 2.368875 TCTCCTCTCCCACACTCAAAAC 59.631 50.000 0.00 0.00 0.00 2.43
293 294 2.368875 GTCTCCTCTCCCACACTCAAAA 59.631 50.000 0.00 0.00 0.00 2.44
294 295 1.971357 GTCTCCTCTCCCACACTCAAA 59.029 52.381 0.00 0.00 0.00 2.69
295 296 1.633774 GTCTCCTCTCCCACACTCAA 58.366 55.000 0.00 0.00 0.00 3.02
296 297 0.609406 CGTCTCCTCTCCCACACTCA 60.609 60.000 0.00 0.00 0.00 3.41
297 298 1.316706 CCGTCTCCTCTCCCACACTC 61.317 65.000 0.00 0.00 0.00 3.51
298 299 1.304547 CCGTCTCCTCTCCCACACT 60.305 63.158 0.00 0.00 0.00 3.55
299 300 2.352032 CCCGTCTCCTCTCCCACAC 61.352 68.421 0.00 0.00 0.00 3.82
300 301 2.037367 CCCGTCTCCTCTCCCACA 59.963 66.667 0.00 0.00 0.00 4.17
301 302 3.462678 GCCCGTCTCCTCTCCCAC 61.463 72.222 0.00 0.00 0.00 4.61
304 305 3.827898 CACGCCCGTCTCCTCTCC 61.828 72.222 0.00 0.00 0.00 3.71
305 306 1.716826 CTACACGCCCGTCTCCTCTC 61.717 65.000 0.00 0.00 0.00 3.20
306 307 1.749638 CTACACGCCCGTCTCCTCT 60.750 63.158 0.00 0.00 0.00 3.69
307 308 2.772691 CCTACACGCCCGTCTCCTC 61.773 68.421 0.00 0.00 0.00 3.71
308 309 2.754658 CCTACACGCCCGTCTCCT 60.755 66.667 0.00 0.00 0.00 3.69
309 310 4.509737 GCCTACACGCCCGTCTCC 62.510 72.222 0.00 0.00 0.00 3.71
310 311 4.849329 CGCCTACACGCCCGTCTC 62.849 72.222 0.00 0.00 0.00 3.36
312 313 4.424566 TTCGCCTACACGCCCGTC 62.425 66.667 0.00 0.00 0.00 4.79
313 314 4.729856 GTTCGCCTACACGCCCGT 62.730 66.667 0.00 0.00 0.00 5.28
314 315 4.430765 AGTTCGCCTACACGCCCG 62.431 66.667 0.00 0.00 0.00 6.13
315 316 2.573609 ATCAGTTCGCCTACACGCCC 62.574 60.000 0.00 0.00 0.00 6.13
316 317 0.101759 TATCAGTTCGCCTACACGCC 59.898 55.000 0.00 0.00 0.00 5.68
317 318 1.917273 TTATCAGTTCGCCTACACGC 58.083 50.000 0.00 0.00 0.00 5.34
318 319 3.302480 GCATTTATCAGTTCGCCTACACG 60.302 47.826 0.00 0.00 0.00 4.49
319 320 3.002348 GGCATTTATCAGTTCGCCTACAC 59.998 47.826 0.00 0.00 36.58 2.90
320 321 3.202906 GGCATTTATCAGTTCGCCTACA 58.797 45.455 0.00 0.00 36.58 2.74
321 322 2.548480 GGGCATTTATCAGTTCGCCTAC 59.452 50.000 0.00 0.00 39.53 3.18
322 323 2.171659 TGGGCATTTATCAGTTCGCCTA 59.828 45.455 0.00 0.00 39.53 3.93
323 324 1.064758 TGGGCATTTATCAGTTCGCCT 60.065 47.619 0.00 0.00 39.53 5.52
324 325 1.065551 GTGGGCATTTATCAGTTCGCC 59.934 52.381 0.00 0.00 38.85 5.54
325 326 1.742831 TGTGGGCATTTATCAGTTCGC 59.257 47.619 0.00 0.00 0.00 4.70
326 327 2.746904 TGTGTGGGCATTTATCAGTTCG 59.253 45.455 0.00 0.00 0.00 3.95
327 328 3.119495 GGTGTGTGGGCATTTATCAGTTC 60.119 47.826 0.00 0.00 0.00 3.01
328 329 2.825532 GGTGTGTGGGCATTTATCAGTT 59.174 45.455 0.00 0.00 0.00 3.16
329 330 2.224992 TGGTGTGTGGGCATTTATCAGT 60.225 45.455 0.00 0.00 0.00 3.41
330 331 2.424601 CTGGTGTGTGGGCATTTATCAG 59.575 50.000 0.00 0.00 0.00 2.90
331 332 2.445427 CTGGTGTGTGGGCATTTATCA 58.555 47.619 0.00 0.00 0.00 2.15
332 333 1.134946 GCTGGTGTGTGGGCATTTATC 59.865 52.381 0.00 0.00 0.00 1.75
333 334 1.185315 GCTGGTGTGTGGGCATTTAT 58.815 50.000 0.00 0.00 0.00 1.40
334 335 0.897863 GGCTGGTGTGTGGGCATTTA 60.898 55.000 0.00 0.00 0.00 1.40
335 336 2.209315 GGCTGGTGTGTGGGCATTT 61.209 57.895 0.00 0.00 0.00 2.32
336 337 2.601367 GGCTGGTGTGTGGGCATT 60.601 61.111 0.00 0.00 0.00 3.56
337 338 4.684134 GGGCTGGTGTGTGGGCAT 62.684 66.667 0.00 0.00 0.00 4.40
340 341 4.666253 CAGGGGCTGGTGTGTGGG 62.666 72.222 0.00 0.00 0.00 4.61
341 342 3.889692 ACAGGGGCTGGTGTGTGG 61.890 66.667 0.00 0.00 35.51 4.17
342 343 2.595463 CACAGGGGCTGGTGTGTG 60.595 66.667 6.34 0.00 39.42 3.82
345 346 3.889692 CCACACAGGGGCTGGTGT 61.890 66.667 4.07 4.07 35.51 4.16
354 355 0.250124 TAACAGTTCGCCCACACAGG 60.250 55.000 0.00 0.00 37.03 4.00
355 356 1.588674 TTAACAGTTCGCCCACACAG 58.411 50.000 0.00 0.00 0.00 3.66
356 357 1.671845 GTTTAACAGTTCGCCCACACA 59.328 47.619 0.00 0.00 0.00 3.72
357 358 1.333435 CGTTTAACAGTTCGCCCACAC 60.333 52.381 0.00 0.00 0.00 3.82
358 359 0.938713 CGTTTAACAGTTCGCCCACA 59.061 50.000 0.00 0.00 0.00 4.17
359 360 0.385098 GCGTTTAACAGTTCGCCCAC 60.385 55.000 6.59 0.00 42.33 4.61
360 361 1.943293 GCGTTTAACAGTTCGCCCA 59.057 52.632 6.59 0.00 42.33 5.36
361 362 4.832767 GCGTTTAACAGTTCGCCC 57.167 55.556 6.59 0.00 42.33 6.13
364 365 2.283086 TGTGTGAGCGTTTAACAGTTCG 59.717 45.455 0.00 0.00 0.00 3.95
365 366 3.936902 TGTGTGAGCGTTTAACAGTTC 57.063 42.857 0.00 0.00 0.00 3.01
366 367 3.059868 CGATGTGTGAGCGTTTAACAGTT 60.060 43.478 0.00 0.00 0.00 3.16
367 368 2.475111 CGATGTGTGAGCGTTTAACAGT 59.525 45.455 0.00 0.00 0.00 3.55
368 369 2.159841 CCGATGTGTGAGCGTTTAACAG 60.160 50.000 0.00 0.00 0.00 3.16
369 370 1.795872 CCGATGTGTGAGCGTTTAACA 59.204 47.619 0.00 0.00 0.00 2.41
370 371 1.796459 ACCGATGTGTGAGCGTTTAAC 59.204 47.619 0.00 0.00 0.00 2.01
371 372 2.063266 GACCGATGTGTGAGCGTTTAA 58.937 47.619 0.00 0.00 0.00 1.52
372 373 1.670674 GGACCGATGTGTGAGCGTTTA 60.671 52.381 0.00 0.00 0.00 2.01
373 374 0.949105 GGACCGATGTGTGAGCGTTT 60.949 55.000 0.00 0.00 0.00 3.60
374 375 1.374252 GGACCGATGTGTGAGCGTT 60.374 57.895 0.00 0.00 0.00 4.84
375 376 2.261671 GGACCGATGTGTGAGCGT 59.738 61.111 0.00 0.00 0.00 5.07
376 377 2.509336 GGGACCGATGTGTGAGCG 60.509 66.667 0.00 0.00 0.00 5.03
377 378 1.153549 GAGGGACCGATGTGTGAGC 60.154 63.158 0.00 0.00 0.00 4.26
378 379 1.517832 GGAGGGACCGATGTGTGAG 59.482 63.158 0.00 0.00 0.00 3.51
379 380 3.708210 GGAGGGACCGATGTGTGA 58.292 61.111 0.00 0.00 0.00 3.58
388 389 0.179040 TTTTCACACACGGAGGGACC 60.179 55.000 0.00 0.00 0.00 4.46
389 390 0.942252 GTTTTCACACACGGAGGGAC 59.058 55.000 0.00 0.00 0.00 4.46
390 391 0.531090 CGTTTTCACACACGGAGGGA 60.531 55.000 0.00 0.00 32.58 4.20
391 392 1.938861 CGTTTTCACACACGGAGGG 59.061 57.895 0.00 0.00 32.58 4.30
396 397 0.314738 CACGTCCGTTTTCACACACG 60.315 55.000 0.00 0.00 34.91 4.49
397 398 0.722848 ACACGTCCGTTTTCACACAC 59.277 50.000 0.00 0.00 0.00 3.82
398 399 0.722282 CACACGTCCGTTTTCACACA 59.278 50.000 0.00 0.00 0.00 3.72
399 400 1.000884 TCACACGTCCGTTTTCACAC 58.999 50.000 0.00 0.00 0.00 3.82
400 401 1.394227 GTTCACACGTCCGTTTTCACA 59.606 47.619 0.00 0.00 0.00 3.58
401 402 1.590442 CGTTCACACGTCCGTTTTCAC 60.590 52.381 0.00 0.00 41.84 3.18
402 403 0.646381 CGTTCACACGTCCGTTTTCA 59.354 50.000 0.00 0.00 41.84 2.69
403 404 3.409283 CGTTCACACGTCCGTTTTC 57.591 52.632 0.00 0.00 41.84 2.29
413 414 3.413558 GCATTTATTCGGTCGTTCACAC 58.586 45.455 0.00 0.00 0.00 3.82
414 415 2.417239 GGCATTTATTCGGTCGTTCACA 59.583 45.455 0.00 0.00 0.00 3.58
415 416 2.223180 GGGCATTTATTCGGTCGTTCAC 60.223 50.000 0.00 0.00 0.00 3.18
416 417 2.011222 GGGCATTTATTCGGTCGTTCA 58.989 47.619 0.00 0.00 0.00 3.18
417 418 2.011222 TGGGCATTTATTCGGTCGTTC 58.989 47.619 0.00 0.00 0.00 3.95
418 419 1.741145 GTGGGCATTTATTCGGTCGTT 59.259 47.619 0.00 0.00 0.00 3.85
419 420 1.339247 TGTGGGCATTTATTCGGTCGT 60.339 47.619 0.00 0.00 0.00 4.34
420 421 1.063469 GTGTGGGCATTTATTCGGTCG 59.937 52.381 0.00 0.00 0.00 4.79
421 422 2.088423 TGTGTGGGCATTTATTCGGTC 58.912 47.619 0.00 0.00 0.00 4.79
422 423 2.091541 CTGTGTGGGCATTTATTCGGT 58.908 47.619 0.00 0.00 0.00 4.69
423 424 1.202290 GCTGTGTGGGCATTTATTCGG 60.202 52.381 0.00 0.00 0.00 4.30
424 425 1.472082 TGCTGTGTGGGCATTTATTCG 59.528 47.619 0.00 0.00 34.56 3.34
425 426 2.736400 GCTGCTGTGTGGGCATTTATTC 60.736 50.000 0.00 0.00 39.07 1.75
426 427 1.205417 GCTGCTGTGTGGGCATTTATT 59.795 47.619 0.00 0.00 39.07 1.40
427 428 0.819582 GCTGCTGTGTGGGCATTTAT 59.180 50.000 0.00 0.00 39.07 1.40
428 429 1.250154 GGCTGCTGTGTGGGCATTTA 61.250 55.000 0.00 0.00 39.07 1.40
429 430 2.576832 GGCTGCTGTGTGGGCATTT 61.577 57.895 0.00 0.00 39.07 2.32
430 431 2.993264 GGCTGCTGTGTGGGCATT 60.993 61.111 0.00 0.00 39.07 3.56
434 435 4.275508 ACTGGGCTGCTGTGTGGG 62.276 66.667 0.00 0.00 0.00 4.61
435 436 2.670934 GACTGGGCTGCTGTGTGG 60.671 66.667 0.00 0.00 0.00 4.17
436 437 1.830587 TAGGACTGGGCTGCTGTGTG 61.831 60.000 0.00 0.00 0.00 3.82
437 438 1.536418 TAGGACTGGGCTGCTGTGT 60.536 57.895 0.00 0.00 0.00 3.72
438 439 1.078848 GTAGGACTGGGCTGCTGTG 60.079 63.158 0.00 0.00 0.00 3.66
439 440 0.911525 ATGTAGGACTGGGCTGCTGT 60.912 55.000 0.00 0.00 0.00 4.40
440 441 0.463295 CATGTAGGACTGGGCTGCTG 60.463 60.000 0.00 0.00 0.00 4.41
441 442 1.630126 CCATGTAGGACTGGGCTGCT 61.630 60.000 0.00 0.00 41.22 4.24
442 443 1.153086 CCATGTAGGACTGGGCTGC 60.153 63.158 0.00 0.00 41.22 5.25
443 444 1.153086 GCCATGTAGGACTGGGCTG 60.153 63.158 0.00 0.00 41.39 4.85
444 445 1.616327 TGCCATGTAGGACTGGGCT 60.616 57.895 0.00 0.00 44.85 5.19
445 446 1.452108 GTGCCATGTAGGACTGGGC 60.452 63.158 0.00 0.00 44.82 5.36
446 447 1.224592 GGTGCCATGTAGGACTGGG 59.775 63.158 0.00 0.00 41.22 4.45
447 448 0.548031 ATGGTGCCATGTAGGACTGG 59.452 55.000 2.45 0.00 41.22 4.00
448 449 3.558931 TTATGGTGCCATGTAGGACTG 57.441 47.619 13.57 0.00 41.22 3.51
449 450 4.796110 ATTTATGGTGCCATGTAGGACT 57.204 40.909 13.57 0.00 41.22 3.85
450 451 5.106157 GCATATTTATGGTGCCATGTAGGAC 60.106 44.000 13.57 0.00 37.82 3.85
451 452 5.009631 GCATATTTATGGTGCCATGTAGGA 58.990 41.667 13.57 0.00 37.82 2.94
452 453 5.314923 GCATATTTATGGTGCCATGTAGG 57.685 43.478 13.57 7.05 37.82 3.18
460 461 5.816777 ACAAATGTTGGCATATTTATGGTGC 59.183 36.000 9.12 0.00 38.12 5.01
461 462 6.238157 GCACAAATGTTGGCATATTTATGGTG 60.238 38.462 14.05 14.58 34.39 4.17
462 463 5.816777 GCACAAATGTTGGCATATTTATGGT 59.183 36.000 14.05 6.04 34.39 3.55
463 464 5.816258 TGCACAAATGTTGGCATATTTATGG 59.184 36.000 14.05 7.53 33.81 2.74
464 465 6.905544 TGCACAAATGTTGGCATATTTATG 57.094 33.333 10.07 10.07 33.81 1.90
465 466 6.315891 GGTTGCACAAATGTTGGCATATTTAT 59.684 34.615 9.12 0.00 36.95 1.40
466 467 5.641209 GGTTGCACAAATGTTGGCATATTTA 59.359 36.000 9.12 0.00 36.95 1.40
467 468 4.455190 GGTTGCACAAATGTTGGCATATTT 59.545 37.500 4.87 4.87 36.95 1.40
468 469 4.002316 GGTTGCACAAATGTTGGCATATT 58.998 39.130 0.00 0.00 36.95 1.28
469 470 3.007723 TGGTTGCACAAATGTTGGCATAT 59.992 39.130 0.00 0.00 36.95 1.78
470 471 2.366590 TGGTTGCACAAATGTTGGCATA 59.633 40.909 0.00 0.00 36.95 3.14
471 472 1.140452 TGGTTGCACAAATGTTGGCAT 59.860 42.857 0.00 0.00 36.95 4.40
472 473 0.538584 TGGTTGCACAAATGTTGGCA 59.461 45.000 0.00 0.00 35.86 4.92
473 474 0.936600 GTGGTTGCACAAATGTTGGC 59.063 50.000 0.00 0.00 34.12 4.52
474 475 2.306341 TGTGGTTGCACAAATGTTGG 57.694 45.000 0.00 0.00 34.12 3.77
481 482 2.433604 ACATCCATTTGTGGTTGCACAA 59.566 40.909 0.00 0.00 42.57 3.33
482 483 2.037901 ACATCCATTTGTGGTTGCACA 58.962 42.857 5.64 0.00 33.20 4.57
483 484 2.406130 CACATCCATTTGTGGTTGCAC 58.594 47.619 5.64 0.00 42.63 4.57
484 485 2.816204 CACATCCATTTGTGGTTGCA 57.184 45.000 5.64 0.00 42.63 4.08
490 491 3.761657 CGTGAATCCACATCCATTTGTG 58.238 45.455 0.00 0.00 45.28 3.33
491 492 2.164219 GCGTGAATCCACATCCATTTGT 59.836 45.455 0.00 0.00 43.34 2.83
492 493 2.792196 CGCGTGAATCCACATCCATTTG 60.792 50.000 0.00 0.00 43.34 2.32
493 494 1.401552 CGCGTGAATCCACATCCATTT 59.598 47.619 0.00 0.00 43.34 2.32
494 495 1.016627 CGCGTGAATCCACATCCATT 58.983 50.000 0.00 0.00 43.34 3.16
495 496 0.107703 ACGCGTGAATCCACATCCAT 60.108 50.000 12.93 0.00 43.34 3.41
496 497 1.018752 CACGCGTGAATCCACATCCA 61.019 55.000 34.93 0.00 43.34 3.41
497 498 1.019278 ACACGCGTGAATCCACATCC 61.019 55.000 42.94 0.00 43.34 3.51
498 499 0.095245 CACACGCGTGAATCCACATC 59.905 55.000 42.94 0.00 46.80 3.06
499 500 1.298157 CCACACGCGTGAATCCACAT 61.298 55.000 42.94 17.58 46.80 3.21
500 501 1.958715 CCACACGCGTGAATCCACA 60.959 57.895 42.94 0.00 46.80 4.17
501 502 2.677003 CCCACACGCGTGAATCCAC 61.677 63.158 42.94 0.00 46.80 4.02
502 503 2.358125 CCCACACGCGTGAATCCA 60.358 61.111 42.94 0.00 46.80 3.41
503 504 3.799755 GCCCACACGCGTGAATCC 61.800 66.667 42.94 23.96 46.80 3.01
504 505 4.147322 CGCCCACACGCGTGAATC 62.147 66.667 42.94 25.64 46.80 2.52
512 513 2.324330 TTTGCATCTCGCCCACACG 61.324 57.895 0.00 0.00 41.33 4.49
513 514 1.210155 GTTTGCATCTCGCCCACAC 59.790 57.895 0.00 0.00 41.33 3.82
514 515 2.324330 CGTTTGCATCTCGCCCACA 61.324 57.895 0.00 0.00 41.33 4.17
515 516 2.480555 CGTTTGCATCTCGCCCAC 59.519 61.111 0.00 0.00 41.33 4.61
516 517 3.430862 GCGTTTGCATCTCGCCCA 61.431 61.111 16.09 0.00 43.41 5.36
520 521 2.324330 TGTGGGCGTTTGCATCTCG 61.324 57.895 0.00 0.00 45.35 4.04
521 522 1.210155 GTGTGGGCGTTTGCATCTC 59.790 57.895 0.00 0.00 45.35 2.75
522 523 2.268076 GGTGTGGGCGTTTGCATCT 61.268 57.895 0.00 0.00 45.35 2.90
523 524 2.258286 GGTGTGGGCGTTTGCATC 59.742 61.111 0.00 0.00 45.35 3.91
524 525 2.203480 AGGTGTGGGCGTTTGCAT 60.203 55.556 0.00 0.00 45.35 3.96
525 526 3.215568 CAGGTGTGGGCGTTTGCA 61.216 61.111 0.00 0.00 45.35 4.08
526 527 3.216292 ACAGGTGTGGGCGTTTGC 61.216 61.111 0.00 0.00 41.71 3.68
527 528 2.721231 CACAGGTGTGGGCGTTTG 59.279 61.111 1.90 0.00 42.10 2.93
538 539 0.181824 AAACACTAACGCCCACAGGT 59.818 50.000 0.00 0.00 34.57 4.00
539 540 0.872388 GAAACACTAACGCCCACAGG 59.128 55.000 0.00 0.00 0.00 4.00
540 541 1.588674 TGAAACACTAACGCCCACAG 58.411 50.000 0.00 0.00 0.00 3.66
541 542 2.039818 TTGAAACACTAACGCCCACA 57.960 45.000 0.00 0.00 0.00 4.17
542 543 4.752661 TTATTGAAACACTAACGCCCAC 57.247 40.909 0.00 0.00 0.00 4.61
543 544 4.396790 GGATTATTGAAACACTAACGCCCA 59.603 41.667 0.00 0.00 0.00 5.36
544 545 4.396790 TGGATTATTGAAACACTAACGCCC 59.603 41.667 0.00 0.00 0.00 6.13
545 546 5.554822 TGGATTATTGAAACACTAACGCC 57.445 39.130 0.00 0.00 0.00 5.68
546 547 7.247728 TGATTGGATTATTGAAACACTAACGC 58.752 34.615 0.00 0.00 0.00 4.84
547 548 7.429340 GCTGATTGGATTATTGAAACACTAACG 59.571 37.037 0.00 0.00 0.00 3.18
548 549 8.243426 TGCTGATTGGATTATTGAAACACTAAC 58.757 33.333 0.00 0.00 0.00 2.34
549 550 8.243426 GTGCTGATTGGATTATTGAAACACTAA 58.757 33.333 0.00 0.00 0.00 2.24
550 551 7.148086 GGTGCTGATTGGATTATTGAAACACTA 60.148 37.037 0.00 0.00 0.00 2.74
551 552 6.350445 GGTGCTGATTGGATTATTGAAACACT 60.350 38.462 0.00 0.00 0.00 3.55
552 553 5.807011 GGTGCTGATTGGATTATTGAAACAC 59.193 40.000 0.00 0.00 0.00 3.32
553 554 5.716228 AGGTGCTGATTGGATTATTGAAACA 59.284 36.000 0.00 0.00 0.00 2.83
554 555 6.038356 CAGGTGCTGATTGGATTATTGAAAC 58.962 40.000 0.00 0.00 32.44 2.78
555 556 5.951148 TCAGGTGCTGATTGGATTATTGAAA 59.049 36.000 0.00 0.00 35.39 2.69
556 557 5.357878 GTCAGGTGCTGATTGGATTATTGAA 59.642 40.000 0.00 0.00 42.73 2.69
557 558 4.883585 GTCAGGTGCTGATTGGATTATTGA 59.116 41.667 0.00 0.00 42.73 2.57
558 559 4.641541 TGTCAGGTGCTGATTGGATTATTG 59.358 41.667 0.00 0.00 42.73 1.90
559 560 4.858850 TGTCAGGTGCTGATTGGATTATT 58.141 39.130 0.00 0.00 42.73 1.40
560 561 4.508551 TGTCAGGTGCTGATTGGATTAT 57.491 40.909 0.00 0.00 42.73 1.28
561 562 3.998913 TGTCAGGTGCTGATTGGATTA 57.001 42.857 0.00 0.00 42.73 1.75
562 563 2.885135 TGTCAGGTGCTGATTGGATT 57.115 45.000 0.00 0.00 42.73 3.01
563 564 2.040813 ACTTGTCAGGTGCTGATTGGAT 59.959 45.455 0.00 0.00 42.73 3.41
564 565 1.421268 ACTTGTCAGGTGCTGATTGGA 59.579 47.619 0.00 0.00 42.73 3.53
565 566 1.808945 GACTTGTCAGGTGCTGATTGG 59.191 52.381 0.00 0.00 42.73 3.16
566 567 2.225019 GTGACTTGTCAGGTGCTGATTG 59.775 50.000 3.45 0.00 42.73 2.67
567 568 2.158769 TGTGACTTGTCAGGTGCTGATT 60.159 45.455 3.45 0.00 42.73 2.57
568 569 1.417517 TGTGACTTGTCAGGTGCTGAT 59.582 47.619 3.45 0.00 42.73 2.90
569 570 0.829990 TGTGACTTGTCAGGTGCTGA 59.170 50.000 3.45 0.00 38.25 4.26
570 571 1.667236 TTGTGACTTGTCAGGTGCTG 58.333 50.000 3.45 0.00 0.00 4.41
571 572 2.017049 GTTTGTGACTTGTCAGGTGCT 58.983 47.619 3.45 0.00 0.00 4.40
572 573 1.268032 CGTTTGTGACTTGTCAGGTGC 60.268 52.381 3.45 0.00 0.00 5.01
573 574 1.268032 GCGTTTGTGACTTGTCAGGTG 60.268 52.381 3.45 0.00 0.00 4.00
574 575 1.014352 GCGTTTGTGACTTGTCAGGT 58.986 50.000 3.45 0.00 0.00 4.00
575 576 1.261619 GAGCGTTTGTGACTTGTCAGG 59.738 52.381 3.45 0.00 0.00 3.86
576 577 2.033407 CAGAGCGTTTGTGACTTGTCAG 60.033 50.000 3.45 0.00 0.00 3.51
577 578 1.933181 CAGAGCGTTTGTGACTTGTCA 59.067 47.619 0.00 0.00 0.00 3.58
578 579 1.333258 GCAGAGCGTTTGTGACTTGTC 60.333 52.381 0.00 0.00 0.00 3.18
579 580 0.657840 GCAGAGCGTTTGTGACTTGT 59.342 50.000 0.00 0.00 0.00 3.16
580 581 0.657312 TGCAGAGCGTTTGTGACTTG 59.343 50.000 0.00 0.00 0.00 3.16
581 582 1.378531 TTGCAGAGCGTTTGTGACTT 58.621 45.000 0.00 0.00 0.00 3.01
582 583 1.378531 TTTGCAGAGCGTTTGTGACT 58.621 45.000 0.00 0.00 0.00 3.41
583 584 1.846175 GTTTTGCAGAGCGTTTGTGAC 59.154 47.619 0.00 0.00 0.00 3.67
584 585 1.202245 GGTTTTGCAGAGCGTTTGTGA 60.202 47.619 0.00 0.00 0.00 3.58
585 586 1.199624 GGTTTTGCAGAGCGTTTGTG 58.800 50.000 0.00 0.00 0.00 3.33
586 587 0.102300 GGGTTTTGCAGAGCGTTTGT 59.898 50.000 0.00 0.00 0.00 2.83
587 588 0.597377 GGGGTTTTGCAGAGCGTTTG 60.597 55.000 0.00 0.00 0.00 2.93
588 589 1.739667 GGGGTTTTGCAGAGCGTTT 59.260 52.632 0.00 0.00 0.00 3.60
589 590 2.200337 GGGGGTTTTGCAGAGCGTT 61.200 57.895 0.00 0.00 0.00 4.84
590 591 1.774894 TAGGGGGTTTTGCAGAGCGT 61.775 55.000 0.00 0.00 0.00 5.07
591 592 0.394352 ATAGGGGGTTTTGCAGAGCG 60.394 55.000 0.00 0.00 0.00 5.03
592 593 1.852633 AATAGGGGGTTTTGCAGAGC 58.147 50.000 0.00 0.00 0.00 4.09
593 594 4.584743 GGATTAATAGGGGGTTTTGCAGAG 59.415 45.833 0.00 0.00 0.00 3.35
594 595 4.542697 GGATTAATAGGGGGTTTTGCAGA 58.457 43.478 0.00 0.00 0.00 4.26
595 596 3.317993 CGGATTAATAGGGGGTTTTGCAG 59.682 47.826 0.00 0.00 0.00 4.41
596 597 3.292460 CGGATTAATAGGGGGTTTTGCA 58.708 45.455 0.00 0.00 0.00 4.08
597 598 3.293337 ACGGATTAATAGGGGGTTTTGC 58.707 45.455 0.00 0.00 0.00 3.68
598 599 6.377712 TGTTTACGGATTAATAGGGGGTTTTG 59.622 38.462 0.00 0.00 0.00 2.44
599 600 6.492274 TGTTTACGGATTAATAGGGGGTTTT 58.508 36.000 0.00 0.00 0.00 2.43
600 601 6.077202 TGTTTACGGATTAATAGGGGGTTT 57.923 37.500 0.00 0.00 0.00 3.27
601 602 5.713760 TGTTTACGGATTAATAGGGGGTT 57.286 39.130 0.00 0.00 0.00 4.11
602 603 5.917545 ATGTTTACGGATTAATAGGGGGT 57.082 39.130 0.00 0.00 0.00 4.95
603 604 5.878669 GCTATGTTTACGGATTAATAGGGGG 59.121 44.000 0.00 0.00 0.00 5.40
604 605 6.469410 TGCTATGTTTACGGATTAATAGGGG 58.531 40.000 0.00 0.00 0.00 4.79
605 606 8.450964 CAATGCTATGTTTACGGATTAATAGGG 58.549 37.037 0.00 0.00 0.00 3.53
606 607 8.999431 ACAATGCTATGTTTACGGATTAATAGG 58.001 33.333 0.00 0.00 0.00 2.57
649 650 2.934553 AGAATAAACTAAAGACGCGGGC 59.065 45.455 12.47 1.16 0.00 6.13
702 703 4.415150 ATGGTGAGCAGGCCGGTG 62.415 66.667 1.90 0.00 0.00 4.94
733 734 3.811083 TGTGTAGGCTTTCGGAAAAGAA 58.189 40.909 4.53 0.00 43.90 2.52
762 763 1.071385 CTAGGTGGGATGAGTGATGCC 59.929 57.143 0.00 0.00 43.01 4.40
808 809 2.708861 TCAAGGGGAGTCTTTACAGCAA 59.291 45.455 0.00 0.00 0.00 3.91
821 822 1.077805 TAGCGTGGTCTCAAGGGGA 59.922 57.895 0.00 0.00 0.00 4.81
863 864 0.526662 GTATAGATCCAGACCGGCCG 59.473 60.000 21.04 21.04 33.14 6.13
864 865 1.629043 TGTATAGATCCAGACCGGCC 58.371 55.000 0.00 0.00 33.14 6.13
865 866 3.368531 GGAATGTATAGATCCAGACCGGC 60.369 52.174 0.00 0.00 33.30 6.13
866 867 3.832490 TGGAATGTATAGATCCAGACCGG 59.168 47.826 0.00 0.00 38.30 5.28
889 890 2.981909 CACTGGCACTGCAGGTGG 60.982 66.667 19.93 8.31 45.44 4.61
911 912 3.535561 AGATATGCTTACCACTGTGTGC 58.464 45.455 7.08 6.26 31.34 4.57
986 987 1.364626 GGCCATCTGAGTCACTTGCG 61.365 60.000 0.00 0.00 0.00 4.85
1005 1006 3.068691 TCAACCCTCCGGCGAGAG 61.069 66.667 9.30 13.41 38.52 3.20
1084 1085 3.051210 CCACTGCCACTGAGACGA 58.949 61.111 0.00 0.00 0.00 4.20
1087 1088 2.142761 AGTGCCACTGCCACTGAGA 61.143 57.895 0.00 0.00 36.33 3.27
1089 1090 2.111669 CAGTGCCACTGCCACTGA 59.888 61.111 12.63 0.00 43.37 3.41
1360 1364 3.535962 CCTCTCCTCCTCGCAGCC 61.536 72.222 0.00 0.00 0.00 4.85
1511 1521 4.910585 GGCGGATGTAGGGCACGG 62.911 72.222 0.00 0.00 0.00 4.94
1601 1611 8.989131 TGGCTTAATTAGTTACTACCTCATCTT 58.011 33.333 0.00 0.00 0.00 2.40
1636 1650 7.967178 TCATGATACTATAAAGAATGCATGCG 58.033 34.615 14.09 0.00 32.80 4.73
1704 1718 7.036220 TGTTCAGCTATAGTCTTTTCTACTGC 58.964 38.462 0.84 0.00 0.00 4.40
1720 1734 5.620206 TGTTTTGGATCTTCTGTTCAGCTA 58.380 37.500 0.00 0.00 0.00 3.32
1920 1948 2.032549 CGTCCGTCCGTACCATTAGTAG 60.033 54.545 0.00 0.00 0.00 2.57
1921 1949 1.939934 CGTCCGTCCGTACCATTAGTA 59.060 52.381 0.00 0.00 0.00 1.82
1922 1950 0.734889 CGTCCGTCCGTACCATTAGT 59.265 55.000 0.00 0.00 0.00 2.24
1963 1991 0.451783 GCACCATCCGGTTGATCAAC 59.548 55.000 27.16 27.16 46.31 3.18
2393 2421 1.292223 CCGTGTTGTGGACGATCCT 59.708 57.895 0.00 0.00 39.21 3.24
2983 3025 4.253685 CCTTGTTCATGTTATGAGGTCGT 58.746 43.478 0.00 0.00 40.94 4.34
2984 3026 3.063997 GCCTTGTTCATGTTATGAGGTCG 59.936 47.826 0.00 0.00 40.94 4.79
2985 3027 4.009675 TGCCTTGTTCATGTTATGAGGTC 58.990 43.478 0.00 0.00 40.94 3.85
2986 3028 4.032960 TGCCTTGTTCATGTTATGAGGT 57.967 40.909 0.00 0.00 40.94 3.85
2989 3031 4.148079 TGGTTGCCTTGTTCATGTTATGA 58.852 39.130 0.00 0.00 37.55 2.15
2992 3034 3.068873 GGTTGGTTGCCTTGTTCATGTTA 59.931 43.478 0.00 0.00 0.00 2.41
3025 3067 4.218635 CGCTAGCCACATCCTAGAATAGAA 59.781 45.833 9.66 0.00 42.77 2.10
3026 3068 3.759086 CGCTAGCCACATCCTAGAATAGA 59.241 47.826 9.66 0.00 42.77 1.98
3027 3069 3.674682 GCGCTAGCCACATCCTAGAATAG 60.675 52.174 9.66 0.00 35.41 1.73
3028 3070 2.231478 GCGCTAGCCACATCCTAGAATA 59.769 50.000 9.66 0.00 35.41 1.75
3029 3071 1.001406 GCGCTAGCCACATCCTAGAAT 59.999 52.381 9.66 0.00 35.41 2.40
3084 3126 4.955811 TCAGTAGTGTTGATGGACTGTT 57.044 40.909 0.00 0.00 38.87 3.16
3085 3127 4.503296 GGTTCAGTAGTGTTGATGGACTGT 60.503 45.833 0.00 0.00 38.87 3.55
3141 3183 7.407337 ACTAGTAAAGAAAAGAACAACAAGCG 58.593 34.615 0.00 0.00 0.00 4.68
3142 3184 8.613482 AGACTAGTAAAGAAAAGAACAACAAGC 58.387 33.333 0.00 0.00 0.00 4.01
3149 3192 8.549548 GGTGACAAGACTAGTAAAGAAAAGAAC 58.450 37.037 0.00 0.00 0.00 3.01
3157 3200 4.083643 TCGTCGGTGACAAGACTAGTAAAG 60.084 45.833 0.00 0.00 35.38 1.85
3200 3243 5.104109 CCCCAGACTCCAATTCCTACATAAA 60.104 44.000 0.00 0.00 0.00 1.40
3205 3248 2.197465 ACCCCAGACTCCAATTCCTAC 58.803 52.381 0.00 0.00 0.00 3.18
3207 3250 1.760405 AACCCCAGACTCCAATTCCT 58.240 50.000 0.00 0.00 0.00 3.36
3213 3256 0.192566 ACCTGTAACCCCAGACTCCA 59.807 55.000 0.00 0.00 34.23 3.86
3214 3257 1.278413 GAACCTGTAACCCCAGACTCC 59.722 57.143 0.00 0.00 34.23 3.85
3221 3264 2.093816 CCGAAGTAGAACCTGTAACCCC 60.094 54.545 0.00 0.00 0.00 4.95
3230 3273 1.135053 GGCTCTGACCGAAGTAGAACC 60.135 57.143 0.00 0.00 0.00 3.62
3289 3333 0.251297 CAATGTGGTGGGCTGGAAGA 60.251 55.000 0.00 0.00 34.07 2.87
3389 3434 5.522460 GCTATTGAAGGTGTTACGCTTCATA 59.478 40.000 0.00 0.00 36.24 2.15
3393 3438 3.007635 GGCTATTGAAGGTGTTACGCTT 58.992 45.455 0.00 0.00 0.00 4.68
3394 3439 2.629051 GGCTATTGAAGGTGTTACGCT 58.371 47.619 0.00 0.00 0.00 5.07
3452 3497 3.506108 GCGCCAGCAGATCAACAT 58.494 55.556 0.00 0.00 44.35 2.71
3470 3515 0.950555 CGACAAGCTTGCACAGGCTA 60.951 55.000 26.27 0.00 43.32 3.93
3471 3516 2.256591 CGACAAGCTTGCACAGGCT 61.257 57.895 26.27 4.64 46.24 4.58
3501 3546 5.184892 AGAACATGGGAGCTTCATAAACT 57.815 39.130 0.00 0.00 0.00 2.66
3505 3550 4.842531 TCAAGAACATGGGAGCTTCATA 57.157 40.909 0.00 0.00 0.00 2.15
3532 3577 7.014326 TGTCGTAAAGATTGGCTATCTACATCT 59.986 37.037 11.79 0.00 42.90 2.90
3552 3597 2.225382 TCCTGGGATGACTTGTCGTA 57.775 50.000 0.00 0.00 0.00 3.43
3556 3601 0.329596 GGCTTCCTGGGATGACTTGT 59.670 55.000 6.69 0.00 0.00 3.16
3586 3631 2.936202 AGTGTTGTGCAGGAATCAACT 58.064 42.857 15.55 3.32 41.05 3.16
3644 3690 1.272490 TGTTAGAGCCTGGTCTTGTCG 59.728 52.381 3.96 0.00 0.00 4.35
3649 3695 1.348036 GGTTGTGTTAGAGCCTGGTCT 59.652 52.381 4.11 4.11 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.