Multiple sequence alignment - TraesCS6A01G238900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G238900 chr6A 100.000 5966 0 0 1 5966 448358269 448352304 0.000000e+00 11018.0
1 TraesCS6A01G238900 chr6A 96.471 85 3 0 5 89 446899907 446899991 2.240000e-29 141.0
2 TraesCS6A01G238900 chr6D 93.091 2258 71 31 114 2326 311589590 311587373 0.000000e+00 3227.0
3 TraesCS6A01G238900 chr6D 92.459 1273 54 21 3822 5064 311585626 311584366 0.000000e+00 1781.0
4 TraesCS6A01G238900 chr6D 86.343 886 84 15 2299 3175 311587209 311586352 0.000000e+00 931.0
5 TraesCS6A01G238900 chr6D 91.267 584 33 10 3258 3829 311586228 311585651 0.000000e+00 780.0
6 TraesCS6A01G238900 chr6D 83.772 456 34 26 5153 5576 311584380 311583933 4.330000e-106 396.0
7 TraesCS6A01G238900 chr6D 88.060 67 6 1 5760 5826 311583721 311583657 1.780000e-10 78.7
8 TraesCS6A01G238900 chr6B 94.726 1858 55 15 558 2402 515016390 515018217 0.000000e+00 2848.0
9 TraesCS6A01G238900 chr6B 94.523 639 25 4 4428 5064 515020147 515020777 0.000000e+00 977.0
10 TraesCS6A01G238900 chr6B 93.237 621 26 7 3822 4426 515019445 515020065 0.000000e+00 900.0
11 TraesCS6A01G238900 chr6B 93.702 524 31 2 2537 3059 515018228 515018750 0.000000e+00 784.0
12 TraesCS6A01G238900 chr6B 85.025 601 45 22 5153 5714 515020763 515021357 2.410000e-158 569.0
13 TraesCS6A01G238900 chr6B 89.726 438 20 10 152 571 515015931 515016361 2.450000e-148 536.0
14 TraesCS6A01G238900 chr6B 95.254 295 10 3 3542 3832 515019133 515019427 1.170000e-126 464.0
15 TraesCS6A01G238900 chr6B 96.172 209 8 0 3218 3426 515018922 515019130 5.730000e-90 342.0
16 TraesCS6A01G238900 chr6B 96.183 131 5 0 3085 3215 515018742 515018872 1.300000e-51 215.0
17 TraesCS6A01G238900 chr6B 92.063 126 8 2 5043 5166 706650303 706650428 6.150000e-40 176.0
18 TraesCS6A01G238900 chr7B 88.469 529 55 5 1030 1552 577279594 577280122 8.440000e-178 634.0
19 TraesCS6A01G238900 chr7B 87.666 527 59 6 1030 1550 577256369 577256895 5.110000e-170 608.0
20 TraesCS6A01G238900 chr7A 96.460 113 3 1 5043 5154 670536302 670536414 1.020000e-42 185.0
21 TraesCS6A01G238900 chr7A 88.966 145 9 7 5019 5159 645027085 645027226 7.950000e-39 172.0
22 TraesCS6A01G238900 chr5A 94.262 122 4 3 5041 5161 664849607 664849488 3.670000e-42 183.0
23 TraesCS6A01G238900 chr5A 94.167 120 6 1 5036 5154 547790006 547790125 1.320000e-41 182.0
24 TraesCS6A01G238900 chr5A 94.167 120 4 3 5048 5165 436100537 436100655 4.750000e-41 180.0
25 TraesCS6A01G238900 chr5A 94.624 93 4 1 1 92 698141779 698141871 6.230000e-30 143.0
26 TraesCS6A01G238900 chr2D 95.652 115 4 1 5047 5160 343104443 343104557 3.670000e-42 183.0
27 TraesCS6A01G238900 chr2A 91.667 132 6 5 5024 5154 35967955 35967828 1.710000e-40 178.0
28 TraesCS6A01G238900 chr3D 90.000 140 7 5 5028 5161 572130978 572131116 2.210000e-39 174.0
29 TraesCS6A01G238900 chr3D 95.506 89 4 0 1 89 488863519 488863431 6.230000e-30 143.0
30 TraesCS6A01G238900 chr7D 96.629 89 3 0 1 89 413249394 413249306 1.340000e-31 148.0
31 TraesCS6A01G238900 chr1D 96.629 89 3 0 1 89 463344363 463344451 1.340000e-31 148.0
32 TraesCS6A01G238900 chr1D 95.506 89 4 0 1 89 325676810 325676898 6.230000e-30 143.0
33 TraesCS6A01G238900 chr1D 95.402 87 4 0 3 89 367162594 367162680 8.060000e-29 139.0
34 TraesCS6A01G238900 chr1D 94.444 90 4 1 1 89 111606869 111606958 2.900000e-28 137.0
35 TraesCS6A01G238900 chr4D 95.556 90 3 1 1 89 447293752 447293663 6.230000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G238900 chr6A 448352304 448358269 5965 True 11018.000000 11018 100.000000 1 5966 1 chr6A.!!$R1 5965
1 TraesCS6A01G238900 chr6D 311583657 311589590 5933 True 1198.950000 3227 89.165333 114 5826 6 chr6D.!!$R1 5712
2 TraesCS6A01G238900 chr6B 515015931 515021357 5426 False 848.333333 2848 93.172000 152 5714 9 chr6B.!!$F2 5562
3 TraesCS6A01G238900 chr7B 577279594 577280122 528 False 634.000000 634 88.469000 1030 1552 1 chr7B.!!$F2 522
4 TraesCS6A01G238900 chr7B 577256369 577256895 526 False 608.000000 608 87.666000 1030 1550 1 chr7B.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 919 0.035439 GATCCGCCTTCTCCAACCAA 60.035 55.0 0.00 0.0 0.00 3.67 F
981 1048 0.547954 GAGTTGGGGAAGGGAGGAGT 60.548 60.0 0.00 0.0 0.00 3.85 F
984 1051 0.620700 TTGGGGAAGGGAGGAGTAGC 60.621 60.0 0.00 0.0 0.00 3.58 F
1725 1813 2.701163 CTATGCGCTCCTTCCCGTCC 62.701 65.0 9.73 0.0 0.00 4.79 F
2770 3068 0.032678 ACCGCGATTGGAGCATAGAG 59.967 55.0 8.23 0.0 34.19 2.43 F
2932 3234 2.683211 AGATGCATATTTGGGTCCCC 57.317 50.0 5.13 0.0 0.00 4.81 F
4628 5219 0.107017 CATCAAGGGCCGAATCCACT 60.107 55.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1935 2023 0.029834 CTTGCGGTATGCTCATTGGC 59.970 55.000 0.00 0.00 46.63 4.52 R
2246 2339 0.034059 CTTATAGACCCCAGGCTGCG 59.966 60.000 9.56 0.00 0.00 5.18 R
2247 2340 0.398318 CCTTATAGACCCCAGGCTGC 59.602 60.000 9.56 0.00 0.00 5.25 R
3588 4030 1.376466 CCCCACCAACTGAGACTGG 59.624 63.158 4.22 4.22 38.77 4.00 R
4625 5216 1.102809 TGGTGTTGCCTGCTTCAGTG 61.103 55.000 0.00 0.00 38.35 3.66 R
4895 5486 0.104304 AGAACGAGTTGAGTTGCCGT 59.896 50.000 0.00 0.00 34.74 5.68 R
5913 6610 0.033601 CGGGTGGGATTCCATTTCCA 60.034 55.000 0.00 0.00 46.09 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.665185 GCGGTGCTCACGGAGTTT 60.665 61.111 11.07 0.00 41.61 2.66
37 38 2.668280 GCGGTGCTCACGGAGTTTC 61.668 63.158 11.07 0.00 41.61 2.78
38 39 1.006102 CGGTGCTCACGGAGTTTCT 60.006 57.895 1.90 0.00 41.61 2.52
39 40 1.009389 CGGTGCTCACGGAGTTTCTC 61.009 60.000 1.90 0.00 41.61 2.87
40 41 0.670854 GGTGCTCACGGAGTTTCTCC 60.671 60.000 5.79 5.79 46.44 3.71
54 55 7.323049 GGAGTTTCTCCTATTAAGAAAAGGC 57.677 40.000 8.38 0.00 46.41 4.35
55 56 6.884836 GGAGTTTCTCCTATTAAGAAAAGGCA 59.115 38.462 8.38 0.00 46.41 4.75
56 57 7.393515 GGAGTTTCTCCTATTAAGAAAAGGCAA 59.606 37.037 8.38 0.00 46.41 4.52
57 58 8.112016 AGTTTCTCCTATTAAGAAAAGGCAAC 57.888 34.615 0.24 0.00 42.63 4.17
58 59 6.737254 TTCTCCTATTAAGAAAAGGCAACG 57.263 37.500 0.00 0.00 33.51 4.10
59 60 6.045072 TCTCCTATTAAGAAAAGGCAACGA 57.955 37.500 0.00 0.00 46.39 3.85
60 61 6.106673 TCTCCTATTAAGAAAAGGCAACGAG 58.893 40.000 0.00 0.00 46.39 4.18
61 62 5.183228 TCCTATTAAGAAAAGGCAACGAGG 58.817 41.667 0.00 0.00 46.39 4.63
62 63 4.335594 CCTATTAAGAAAAGGCAACGAGGG 59.664 45.833 0.00 0.00 46.39 4.30
63 64 2.943036 TAAGAAAAGGCAACGAGGGT 57.057 45.000 0.00 0.00 46.39 4.34
64 65 2.067365 AAGAAAAGGCAACGAGGGTT 57.933 45.000 0.00 0.00 46.39 4.11
65 66 2.943036 AGAAAAGGCAACGAGGGTTA 57.057 45.000 0.00 0.00 46.39 2.85
66 67 2.779506 AGAAAAGGCAACGAGGGTTAG 58.220 47.619 0.00 0.00 46.39 2.34
67 68 1.199327 GAAAAGGCAACGAGGGTTAGC 59.801 52.381 0.00 0.00 46.39 3.09
68 69 0.400594 AAAGGCAACGAGGGTTAGCT 59.599 50.000 0.00 0.00 46.39 3.32
69 70 0.036294 AAGGCAACGAGGGTTAGCTC 60.036 55.000 0.00 0.00 46.39 4.09
70 71 0.905337 AGGCAACGAGGGTTAGCTCT 60.905 55.000 0.00 0.00 46.39 4.09
71 72 0.036294 GGCAACGAGGGTTAGCTCTT 60.036 55.000 0.00 0.00 33.72 2.85
72 73 1.079503 GCAACGAGGGTTAGCTCTTG 58.920 55.000 0.00 0.00 33.72 3.02
73 74 1.726853 CAACGAGGGTTAGCTCTTGG 58.273 55.000 0.00 0.00 33.72 3.61
74 75 0.613777 AACGAGGGTTAGCTCTTGGG 59.386 55.000 0.00 0.00 33.72 4.12
75 76 0.544595 ACGAGGGTTAGCTCTTGGGT 60.545 55.000 0.00 0.00 30.61 4.51
76 77 0.613777 CGAGGGTTAGCTCTTGGGTT 59.386 55.000 0.00 0.00 0.00 4.11
77 78 1.676014 CGAGGGTTAGCTCTTGGGTTG 60.676 57.143 0.00 0.00 0.00 3.77
78 79 0.698818 AGGGTTAGCTCTTGGGTTGG 59.301 55.000 0.00 0.00 0.00 3.77
79 80 0.404426 GGGTTAGCTCTTGGGTTGGT 59.596 55.000 0.00 0.00 0.00 3.67
80 81 1.613520 GGGTTAGCTCTTGGGTTGGTC 60.614 57.143 0.00 0.00 0.00 4.02
81 82 1.351350 GGTTAGCTCTTGGGTTGGTCT 59.649 52.381 0.00 0.00 0.00 3.85
82 83 2.615747 GGTTAGCTCTTGGGTTGGTCTC 60.616 54.545 0.00 0.00 0.00 3.36
83 84 2.024176 TAGCTCTTGGGTTGGTCTCA 57.976 50.000 0.00 0.00 0.00 3.27
84 85 1.366319 AGCTCTTGGGTTGGTCTCAT 58.634 50.000 0.00 0.00 0.00 2.90
85 86 1.707427 AGCTCTTGGGTTGGTCTCATT 59.293 47.619 0.00 0.00 0.00 2.57
86 87 2.108952 AGCTCTTGGGTTGGTCTCATTT 59.891 45.455 0.00 0.00 0.00 2.32
87 88 2.893489 GCTCTTGGGTTGGTCTCATTTT 59.107 45.455 0.00 0.00 0.00 1.82
88 89 3.321968 GCTCTTGGGTTGGTCTCATTTTT 59.678 43.478 0.00 0.00 0.00 1.94
89 90 4.797275 GCTCTTGGGTTGGTCTCATTTTTG 60.797 45.833 0.00 0.00 0.00 2.44
90 91 4.541705 TCTTGGGTTGGTCTCATTTTTGA 58.458 39.130 0.00 0.00 0.00 2.69
91 92 5.147032 TCTTGGGTTGGTCTCATTTTTGAT 58.853 37.500 0.00 0.00 0.00 2.57
92 93 4.870123 TGGGTTGGTCTCATTTTTGATG 57.130 40.909 0.00 0.00 0.00 3.07
93 94 4.478203 TGGGTTGGTCTCATTTTTGATGA 58.522 39.130 0.00 0.00 0.00 2.92
94 95 4.898265 TGGGTTGGTCTCATTTTTGATGAA 59.102 37.500 0.00 0.00 0.00 2.57
95 96 5.221422 TGGGTTGGTCTCATTTTTGATGAAC 60.221 40.000 0.00 0.00 0.00 3.18
96 97 5.011023 GGGTTGGTCTCATTTTTGATGAACT 59.989 40.000 0.00 0.00 0.00 3.01
97 98 5.922544 GGTTGGTCTCATTTTTGATGAACTG 59.077 40.000 0.00 0.00 0.00 3.16
98 99 5.710513 TGGTCTCATTTTTGATGAACTGG 57.289 39.130 0.00 0.00 0.00 4.00
99 100 5.384336 TGGTCTCATTTTTGATGAACTGGA 58.616 37.500 0.00 0.00 0.00 3.86
100 101 5.832595 TGGTCTCATTTTTGATGAACTGGAA 59.167 36.000 0.00 0.00 0.00 3.53
101 102 6.323482 TGGTCTCATTTTTGATGAACTGGAAA 59.677 34.615 0.00 0.00 0.00 3.13
102 103 7.015487 TGGTCTCATTTTTGATGAACTGGAAAT 59.985 33.333 0.00 0.00 0.00 2.17
103 104 8.522830 GGTCTCATTTTTGATGAACTGGAAATA 58.477 33.333 0.00 0.00 0.00 1.40
107 108 9.859427 TCATTTTTGATGAACTGGAAATATCAC 57.141 29.630 0.00 0.00 0.00 3.06
108 109 9.865321 CATTTTTGATGAACTGGAAATATCACT 57.135 29.630 0.00 0.00 0.00 3.41
109 110 9.865321 ATTTTTGATGAACTGGAAATATCACTG 57.135 29.630 0.00 0.00 0.00 3.66
110 111 8.408043 TTTTGATGAACTGGAAATATCACTGT 57.592 30.769 0.00 0.00 0.00 3.55
111 112 7.615582 TTGATGAACTGGAAATATCACTGTC 57.384 36.000 0.00 0.00 0.00 3.51
112 113 5.812127 TGATGAACTGGAAATATCACTGTCG 59.188 40.000 0.00 0.00 0.00 4.35
124 125 2.447443 TCACTGTCGCTCTAACCATCT 58.553 47.619 0.00 0.00 0.00 2.90
129 130 4.222886 CTGTCGCTCTAACCATCTAATCG 58.777 47.826 0.00 0.00 0.00 3.34
132 133 3.067601 TCGCTCTAACCATCTAATCGCAA 59.932 43.478 0.00 0.00 0.00 4.85
136 137 5.983720 GCTCTAACCATCTAATCGCAAGTTA 59.016 40.000 0.00 0.00 39.48 2.24
147 148 0.093026 CGCAAGTTAGTTCGCGGAAG 59.907 55.000 6.13 0.00 43.84 3.46
150 151 2.733026 GCAAGTTAGTTCGCGGAAGTAA 59.267 45.455 6.13 10.02 35.78 2.24
191 192 1.546323 CCCATCCCATGTAGATGTGGC 60.546 57.143 17.22 0.00 39.62 5.01
204 205 3.067106 AGATGTGGCACTACAAAAGTCG 58.933 45.455 19.83 0.00 35.76 4.18
303 308 9.722184 CAACAGTACTACTAGTATAGGCTGATA 57.278 37.037 20.70 0.00 44.97 2.15
305 310 8.542080 ACAGTACTACTAGTATAGGCTGATAGG 58.458 40.741 20.70 4.27 44.97 2.57
310 315 9.737844 ACTACTAGTATAGGCTGATAGGTAAAC 57.262 37.037 2.33 0.00 44.97 2.01
323 336 6.110707 TGATAGGTAAACGAGGGAATCAAAC 58.889 40.000 0.00 0.00 0.00 2.93
458 475 0.097674 CAACAGCAGCCGCATCTTAC 59.902 55.000 0.00 0.00 42.27 2.34
460 477 0.824109 ACAGCAGCCGCATCTTACTA 59.176 50.000 0.00 0.00 42.27 1.82
490 508 5.828299 TCATCATCGGTCCAAAATTTACC 57.172 39.130 0.00 0.00 0.00 2.85
508 526 2.325484 ACCCTTCACCAACCCAAATTC 58.675 47.619 0.00 0.00 0.00 2.17
543 561 5.977725 GGCAAAACTACCTTTGACTCTTTTC 59.022 40.000 0.39 0.00 40.57 2.29
604 667 1.650153 CGCAACGCAAATCATTGGAAG 59.350 47.619 0.00 0.00 37.02 3.46
634 697 2.141517 GGTGATGATGAGATGCCTTCG 58.858 52.381 0.00 0.00 0.00 3.79
692 755 4.947147 GCCAACAGCGACCACCCA 62.947 66.667 0.00 0.00 0.00 4.51
718 781 1.945207 CGATTCAAAACCACGAACCG 58.055 50.000 0.00 0.00 0.00 4.44
759 822 2.325166 GCACGCCAAAACGAACGA 59.675 55.556 0.14 0.00 36.70 3.85
760 823 1.721133 GCACGCCAAAACGAACGAG 60.721 57.895 0.14 0.00 36.70 4.18
761 824 1.721133 CACGCCAAAACGAACGAGC 60.721 57.895 0.14 0.00 36.70 5.03
762 825 2.496794 CGCCAAAACGAACGAGCG 60.497 61.111 0.14 0.00 37.39 5.03
784 847 2.651455 ACGACATATCCGAACTCCTCA 58.349 47.619 0.00 0.00 0.00 3.86
785 848 3.223435 ACGACATATCCGAACTCCTCAT 58.777 45.455 0.00 0.00 0.00 2.90
786 849 3.253677 ACGACATATCCGAACTCCTCATC 59.746 47.826 0.00 0.00 0.00 2.92
795 858 1.410882 GAACTCCTCATCCTCCTTCCG 59.589 57.143 0.00 0.00 0.00 4.30
805 868 2.927856 TCCTTCCGGAGCAAGCCA 60.928 61.111 3.34 0.00 33.30 4.75
806 869 2.437359 CCTTCCGGAGCAAGCCAG 60.437 66.667 3.34 0.00 0.00 4.85
807 870 2.437359 CTTCCGGAGCAAGCCAGG 60.437 66.667 3.34 0.00 0.00 4.45
849 916 1.521681 CGGATCCGCCTTCTCCAAC 60.522 63.158 23.37 0.00 0.00 3.77
850 917 1.153147 GGATCCGCCTTCTCCAACC 60.153 63.158 0.00 0.00 0.00 3.77
851 918 1.602237 GATCCGCCTTCTCCAACCA 59.398 57.895 0.00 0.00 0.00 3.67
852 919 0.035439 GATCCGCCTTCTCCAACCAA 60.035 55.000 0.00 0.00 0.00 3.67
865 932 3.415650 AACCAATCCGATCGCCCCC 62.416 63.158 10.32 0.00 0.00 5.40
968 1035 4.680237 TGACTGCCGCGGAGTTGG 62.680 66.667 33.48 15.12 0.00 3.77
975 1042 4.778143 CGCGGAGTTGGGGAAGGG 62.778 72.222 0.00 0.00 0.00 3.95
978 1045 2.670148 CGGAGTTGGGGAAGGGAGG 61.670 68.421 0.00 0.00 0.00 4.30
979 1046 1.229853 GGAGTTGGGGAAGGGAGGA 60.230 63.158 0.00 0.00 0.00 3.71
980 1047 1.275421 GGAGTTGGGGAAGGGAGGAG 61.275 65.000 0.00 0.00 0.00 3.69
981 1048 0.547954 GAGTTGGGGAAGGGAGGAGT 60.548 60.000 0.00 0.00 0.00 3.85
982 1049 0.797579 AGTTGGGGAAGGGAGGAGTA 59.202 55.000 0.00 0.00 0.00 2.59
983 1050 1.205055 GTTGGGGAAGGGAGGAGTAG 58.795 60.000 0.00 0.00 0.00 2.57
984 1051 0.620700 TTGGGGAAGGGAGGAGTAGC 60.621 60.000 0.00 0.00 0.00 3.58
1023 1093 3.363844 GAGCCTGTCGGACTCTGGC 62.364 68.421 22.88 22.88 45.78 4.85
1725 1813 2.701163 CTATGCGCTCCTTCCCGTCC 62.701 65.000 9.73 0.00 0.00 4.79
2049 2137 4.069232 CCCAAGAGCGTGCGAGGA 62.069 66.667 0.00 0.00 0.00 3.71
2061 2149 4.180946 CGAGGAGAGGCACGGTCG 62.181 72.222 0.00 0.00 0.00 4.79
2237 2330 5.013079 TCAAGGACAGTTCAGATTGTATGGT 59.987 40.000 0.00 0.00 0.00 3.55
2241 2334 5.992217 GGACAGTTCAGATTGTATGGTATCC 59.008 44.000 0.00 0.00 0.00 2.59
2242 2335 6.408092 GGACAGTTCAGATTGTATGGTATCCA 60.408 42.308 0.00 0.00 38.19 3.41
2243 2336 6.957631 ACAGTTCAGATTGTATGGTATCCAA 58.042 36.000 0.00 0.00 36.95 3.53
2244 2337 7.402054 ACAGTTCAGATTGTATGGTATCCAAA 58.598 34.615 0.00 0.00 36.95 3.28
2245 2338 7.888021 ACAGTTCAGATTGTATGGTATCCAAAA 59.112 33.333 0.00 0.00 36.95 2.44
2246 2339 8.184192 CAGTTCAGATTGTATGGTATCCAAAAC 58.816 37.037 0.00 0.00 36.95 2.43
2247 2340 6.918892 TCAGATTGTATGGTATCCAAAACG 57.081 37.500 0.00 0.00 36.95 3.60
2249 2342 5.065859 CAGATTGTATGGTATCCAAAACGCA 59.934 40.000 0.00 0.00 36.95 5.24
2251 2344 2.680841 TGTATGGTATCCAAAACGCAGC 59.319 45.455 0.00 0.00 36.95 5.25
2252 2345 1.102978 ATGGTATCCAAAACGCAGCC 58.897 50.000 0.00 0.00 36.95 4.85
2253 2346 0.037590 TGGTATCCAAAACGCAGCCT 59.962 50.000 0.00 0.00 0.00 4.58
2284 2389 8.723365 TCTATAAGGGTGGTTGATATGATGTTT 58.277 33.333 0.00 0.00 0.00 2.83
2293 2398 8.511321 GTGGTTGATATGATGTTTTGTCAAGTA 58.489 33.333 0.00 0.00 0.00 2.24
2294 2399 9.072375 TGGTTGATATGATGTTTTGTCAAGTAA 57.928 29.630 0.00 0.00 0.00 2.24
2393 2691 8.525290 AAGTTATGTTGATAAATCTCCCCTTG 57.475 34.615 0.00 0.00 0.00 3.61
2423 2721 7.976135 TTCGGTAGTACTCCTATACAAGATC 57.024 40.000 0.00 0.00 0.00 2.75
2433 2731 5.326069 TCCTATACAAGATCAGGAGCCTAC 58.674 45.833 0.00 0.00 32.20 3.18
2453 2751 9.649316 AGCCTACACTTTAGTCTATTATTCTCT 57.351 33.333 0.00 0.00 0.00 3.10
2479 2777 8.781067 TTTAAACATATACATGATTTCAGCGC 57.219 30.769 0.00 0.00 35.96 5.92
2506 2804 1.402968 CGTGCCGTTAGAGCCTTAGTA 59.597 52.381 0.00 0.00 0.00 1.82
2508 2806 3.490419 CGTGCCGTTAGAGCCTTAGTATT 60.490 47.826 0.00 0.00 0.00 1.89
2513 2811 4.023365 CCGTTAGAGCCTTAGTATTAGCGT 60.023 45.833 0.00 0.00 0.00 5.07
2534 2832 5.618561 CGTACAGCTATTTGTTTGAGAACC 58.381 41.667 0.00 0.00 34.80 3.62
2586 2884 8.999431 TGATATTATTTCTCGAACATTTAGCCC 58.001 33.333 0.00 0.00 0.00 5.19
2672 2970 7.512746 TCATAATCTTATAACCTAGGGTGCTGT 59.487 37.037 10.48 0.00 35.34 4.40
2770 3068 0.032678 ACCGCGATTGGAGCATAGAG 59.967 55.000 8.23 0.00 34.19 2.43
2808 3107 6.417191 TCGAAGGCTGACATGTTATTTTAC 57.583 37.500 0.00 0.00 0.00 2.01
2914 3214 6.141462 GTCGGTTAGACCTAATCGTATGAAG 58.859 44.000 18.37 0.00 46.44 3.02
2932 3234 2.683211 AGATGCATATTTGGGTCCCC 57.317 50.000 5.13 0.00 0.00 4.81
3054 3357 3.551846 TGCTAGTTTTATAAGGCCCTGC 58.448 45.455 0.00 0.00 0.00 4.85
3088 3393 9.914131 GAAAACTCCTTATTGAGTAAATTTGCT 57.086 29.630 8.67 8.67 44.68 3.91
3148 3453 8.169977 TCCCTGATGCAATTCATAAATTAGTC 57.830 34.615 0.00 0.00 35.05 2.59
3188 3493 6.148811 ACTTGGTCGTAGTGAAATATTGGTTG 59.851 38.462 0.00 0.00 0.00 3.77
3215 3520 7.771361 TCAACTTTTGGTGAGAGTGTTATTGTA 59.229 33.333 0.00 0.00 41.97 2.41
3286 3722 9.392506 TCATATCTGGGATTGGAAATAACTCTA 57.607 33.333 0.00 0.00 0.00 2.43
3473 3915 6.721704 AGTTCTTCTTTCTGAATTTGCCTT 57.278 33.333 0.00 0.00 33.71 4.35
3474 3916 7.117285 AGTTCTTCTTTCTGAATTTGCCTTT 57.883 32.000 0.00 0.00 33.71 3.11
3495 3937 7.428826 CCTTTTTAGGCCAATTCACTATGATC 58.571 38.462 5.01 0.00 0.00 2.92
3501 3943 6.371278 AGGCCAATTCACTATGATCAAGATT 58.629 36.000 5.01 0.00 0.00 2.40
3503 3945 6.263842 GGCCAATTCACTATGATCAAGATTCA 59.736 38.462 0.00 0.00 0.00 2.57
3507 3949 9.880064 CAATTCACTATGATCAAGATTCATGAC 57.120 33.333 0.00 0.00 0.00 3.06
3526 3968 6.433716 TCATGACCACTTGCATTTAAGATCAA 59.566 34.615 0.00 0.00 0.00 2.57
3527 3969 6.647334 TGACCACTTGCATTTAAGATCAAA 57.353 33.333 0.00 0.00 0.00 2.69
3528 3970 6.680810 TGACCACTTGCATTTAAGATCAAAG 58.319 36.000 0.00 0.00 0.00 2.77
3588 4030 4.047822 CGTCTTCATAACTGAGCATCTCC 58.952 47.826 0.00 0.00 34.92 3.71
3867 4346 8.376270 GGCCACATCTTATAAGAACCTAATACT 58.624 37.037 18.79 0.00 38.77 2.12
3899 4378 6.721704 ATGGGCATTTCCTTCTTATCTTTC 57.278 37.500 0.00 0.00 34.39 2.62
3900 4379 5.579047 TGGGCATTTCCTTCTTATCTTTCA 58.421 37.500 0.00 0.00 34.39 2.69
3962 4447 8.478877 TGTTTGGATGTTGGTAAAGTTTTATGT 58.521 29.630 0.00 0.00 0.00 2.29
3971 4456 9.575783 GTTGGTAAAGTTTTATGTCAAAAGTGA 57.424 29.630 0.00 0.00 0.00 3.41
4006 4491 4.081420 GTCACCACTCTTCACACCTATGAT 60.081 45.833 0.00 0.00 0.00 2.45
4044 4535 4.160252 TCTTAGCCTTCATTTTCCATTGCC 59.840 41.667 0.00 0.00 0.00 4.52
4058 4551 5.199982 TCCATTGCCCTCTATAAACCAAA 57.800 39.130 0.00 0.00 0.00 3.28
4081 4574 9.107177 CAAAGTTGATAGACTAGATTTCATGCT 57.893 33.333 0.00 0.00 0.00 3.79
4104 4597 6.484977 GCTTGCTAAGTCTATATCTTTTGGCT 59.515 38.462 0.00 0.00 0.00 4.75
4194 4687 2.710377 CCACGACATGGGATTTCAAGA 58.290 47.619 0.00 0.00 45.95 3.02
4215 4708 4.342378 AGAAGTTCAAGCAGACTGTCTACA 59.658 41.667 10.47 0.00 0.00 2.74
4299 4792 3.244911 CCAGACCTGGGTATGTTTGAGTT 60.245 47.826 12.51 0.00 46.81 3.01
4302 4795 4.351111 AGACCTGGGTATGTTTGAGTTCTT 59.649 41.667 0.00 0.00 0.00 2.52
4304 4797 4.104102 ACCTGGGTATGTTTGAGTTCTTCA 59.896 41.667 0.00 0.00 0.00 3.02
4305 4798 5.070001 CCTGGGTATGTTTGAGTTCTTCAA 58.930 41.667 0.00 0.00 43.92 2.69
4605 5196 3.925913 GCGAGATCCTAGCAATTCATCTC 59.074 47.826 0.00 0.00 37.29 2.75
4625 5216 2.158813 TCTTACATCAAGGGCCGAATCC 60.159 50.000 0.00 0.00 34.76 3.01
4628 5219 0.107017 CATCAAGGGCCGAATCCACT 60.107 55.000 0.00 0.00 0.00 4.00
4896 5487 3.559238 CCATCAACTGGCACTTGTTAC 57.441 47.619 6.74 0.00 38.47 2.50
4897 5488 2.095768 CCATCAACTGGCACTTGTTACG 60.096 50.000 6.74 0.00 38.47 3.18
4898 5489 1.588674 TCAACTGGCACTTGTTACGG 58.411 50.000 6.74 0.00 0.00 4.02
4899 5490 0.040425 CAACTGGCACTTGTTACGGC 60.040 55.000 0.00 0.00 0.00 5.68
4900 5491 0.464735 AACTGGCACTTGTTACGGCA 60.465 50.000 0.00 0.00 0.00 5.69
4901 5492 0.464735 ACTGGCACTTGTTACGGCAA 60.465 50.000 0.00 0.00 34.52 4.52
4902 5493 0.040425 CTGGCACTTGTTACGGCAAC 60.040 55.000 0.00 0.00 37.67 4.17
4903 5494 0.464735 TGGCACTTGTTACGGCAACT 60.465 50.000 4.15 0.00 38.05 3.16
4906 5497 1.332375 GCACTTGTTACGGCAACTCAA 59.668 47.619 4.15 0.00 38.05 3.02
5014 5605 4.977393 ACCCACTGGTGTGTGTTC 57.023 55.556 0.00 0.00 45.58 3.18
5020 5611 1.946768 CACTGGTGTGTGTTCGGAATT 59.053 47.619 0.00 0.00 39.24 2.17
5021 5612 3.135225 CACTGGTGTGTGTTCGGAATTA 58.865 45.455 0.00 0.00 39.24 1.40
5055 5646 7.904558 TCATCATCATACTGAACTACTTCCT 57.095 36.000 0.00 0.00 0.00 3.36
5056 5647 7.946207 TCATCATCATACTGAACTACTTCCTC 58.054 38.462 0.00 0.00 0.00 3.71
5057 5648 7.782168 TCATCATCATACTGAACTACTTCCTCT 59.218 37.037 0.00 0.00 0.00 3.69
5058 5649 7.340122 TCATCATACTGAACTACTTCCTCTG 57.660 40.000 0.00 0.00 0.00 3.35
5059 5650 6.892456 TCATCATACTGAACTACTTCCTCTGT 59.108 38.462 0.00 0.00 0.00 3.41
5060 5651 7.397476 TCATCATACTGAACTACTTCCTCTGTT 59.603 37.037 0.00 0.00 0.00 3.16
5061 5652 7.159322 TCATACTGAACTACTTCCTCTGTTC 57.841 40.000 0.00 0.00 39.18 3.18
5062 5653 4.875561 ACTGAACTACTTCCTCTGTTCC 57.124 45.455 0.00 0.00 38.29 3.62
5063 5654 4.223953 ACTGAACTACTTCCTCTGTTCCA 58.776 43.478 0.00 0.00 38.29 3.53
5064 5655 4.654262 ACTGAACTACTTCCTCTGTTCCAA 59.346 41.667 0.00 0.00 38.29 3.53
5065 5656 5.130477 ACTGAACTACTTCCTCTGTTCCAAA 59.870 40.000 0.00 0.00 38.29 3.28
5066 5657 6.183361 ACTGAACTACTTCCTCTGTTCCAAAT 60.183 38.462 0.00 0.00 38.29 2.32
5067 5658 6.601332 TGAACTACTTCCTCTGTTCCAAATT 58.399 36.000 0.00 0.00 38.29 1.82
5068 5659 7.741785 TGAACTACTTCCTCTGTTCCAAATTA 58.258 34.615 0.00 0.00 38.29 1.40
5069 5660 7.660208 TGAACTACTTCCTCTGTTCCAAATTAC 59.340 37.037 0.00 0.00 38.29 1.89
5070 5661 7.317722 ACTACTTCCTCTGTTCCAAATTACT 57.682 36.000 0.00 0.00 0.00 2.24
5071 5662 7.387643 ACTACTTCCTCTGTTCCAAATTACTC 58.612 38.462 0.00 0.00 0.00 2.59
5072 5663 5.238583 ACTTCCTCTGTTCCAAATTACTCG 58.761 41.667 0.00 0.00 0.00 4.18
5073 5664 4.884668 TCCTCTGTTCCAAATTACTCGT 57.115 40.909 0.00 0.00 0.00 4.18
5074 5665 4.817517 TCCTCTGTTCCAAATTACTCGTC 58.182 43.478 0.00 0.00 0.00 4.20
5075 5666 3.612860 CCTCTGTTCCAAATTACTCGTCG 59.387 47.826 0.00 0.00 0.00 5.12
5076 5667 2.991190 TCTGTTCCAAATTACTCGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
5077 5668 2.734606 CTGTTCCAAATTACTCGTCGCA 59.265 45.455 0.00 0.00 0.00 5.10
5078 5669 2.734606 TGTTCCAAATTACTCGTCGCAG 59.265 45.455 0.00 0.00 0.00 5.18
5079 5670 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
5080 5671 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
5081 5672 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
5082 5673 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
5083 5674 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
5084 5675 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
5085 5676 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
5086 5677 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
5087 5678 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
5088 5679 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
5089 5680 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
5090 5681 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
5091 5682 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
5092 5683 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
5093 5684 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
5094 5685 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
5095 5686 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
5096 5687 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
5097 5688 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
5098 5689 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
5099 5690 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
5100 5691 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
5101 5692 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
5127 5718 6.537453 ACATCTAGATACATCCATACCTGC 57.463 41.667 4.54 0.00 0.00 4.85
5128 5719 6.019108 ACATCTAGATACATCCATACCTGCA 58.981 40.000 4.54 0.00 0.00 4.41
5129 5720 5.984695 TCTAGATACATCCATACCTGCAC 57.015 43.478 0.00 0.00 0.00 4.57
5130 5721 5.393866 TCTAGATACATCCATACCTGCACA 58.606 41.667 0.00 0.00 0.00 4.57
5131 5722 5.838521 TCTAGATACATCCATACCTGCACAA 59.161 40.000 0.00 0.00 0.00 3.33
5132 5723 4.965814 AGATACATCCATACCTGCACAAG 58.034 43.478 0.00 0.00 0.00 3.16
5133 5724 4.410228 AGATACATCCATACCTGCACAAGT 59.590 41.667 0.00 0.00 0.00 3.16
5134 5725 5.602561 AGATACATCCATACCTGCACAAGTA 59.397 40.000 0.00 0.00 0.00 2.24
5135 5726 4.568072 ACATCCATACCTGCACAAGTAA 57.432 40.909 0.00 0.00 0.00 2.24
5136 5727 5.116084 ACATCCATACCTGCACAAGTAAT 57.884 39.130 0.00 0.00 0.00 1.89
5137 5728 5.509498 ACATCCATACCTGCACAAGTAATT 58.491 37.500 0.00 0.00 0.00 1.40
5138 5729 5.590259 ACATCCATACCTGCACAAGTAATTC 59.410 40.000 0.00 0.00 0.00 2.17
5139 5730 4.188462 TCCATACCTGCACAAGTAATTCG 58.812 43.478 0.00 0.00 0.00 3.34
5140 5731 3.312421 CCATACCTGCACAAGTAATTCGG 59.688 47.826 0.00 0.00 0.00 4.30
5141 5732 2.851263 ACCTGCACAAGTAATTCGGA 57.149 45.000 0.00 0.00 0.00 4.55
5142 5733 3.134574 ACCTGCACAAGTAATTCGGAA 57.865 42.857 0.00 0.00 0.00 4.30
5143 5734 2.812011 ACCTGCACAAGTAATTCGGAAC 59.188 45.455 0.00 0.00 0.00 3.62
5206 5800 1.220206 CTCTTGGTGCGCTGGATCT 59.780 57.895 9.73 0.00 0.00 2.75
5270 5899 2.256174 CATGAATTGCTTTGCGACTGG 58.744 47.619 0.00 0.00 0.00 4.00
5271 5900 0.039256 TGAATTGCTTTGCGACTGGC 60.039 50.000 0.00 0.00 43.96 4.85
5272 5901 0.733909 GAATTGCTTTGCGACTGGCC 60.734 55.000 0.00 0.00 42.61 5.36
5274 5903 4.577677 TGCTTTGCGACTGGCCCA 62.578 61.111 0.00 0.00 42.61 5.36
5275 5904 3.741476 GCTTTGCGACTGGCCCAG 61.741 66.667 9.83 9.83 42.61 4.45
5294 5923 2.359975 CCCCCTCGTGTGCTTTCC 60.360 66.667 0.00 0.00 0.00 3.13
5295 5924 2.359975 CCCCTCGTGTGCTTTCCC 60.360 66.667 0.00 0.00 0.00 3.97
5382 6012 1.002134 TGCTTTCAGCCTGGCCTAC 60.002 57.895 16.57 0.00 41.51 3.18
5386 6016 3.605749 TTCAGCCTGGCCTACGTGC 62.606 63.158 16.57 0.00 0.00 5.34
5390 6020 2.584064 CCTGGCCTACGTGCATCA 59.416 61.111 3.32 0.00 0.00 3.07
5391 6021 1.146930 CCTGGCCTACGTGCATCAT 59.853 57.895 3.32 0.00 0.00 2.45
5392 6022 0.392706 CCTGGCCTACGTGCATCATA 59.607 55.000 3.32 0.00 0.00 2.15
5394 6024 2.341257 CTGGCCTACGTGCATCATATC 58.659 52.381 3.32 0.00 0.00 1.63
5395 6025 1.970640 TGGCCTACGTGCATCATATCT 59.029 47.619 3.32 0.00 0.00 1.98
5480 6113 4.506979 GGCAGGAATCATCTTCATCATCCT 60.507 45.833 0.00 0.00 36.28 3.24
5493 6126 7.274447 TCTTCATCATCCTTTTTGCTTGTTTT 58.726 30.769 0.00 0.00 0.00 2.43
5515 6148 2.184322 GAGAACGCGCTCCATCCA 59.816 61.111 5.73 0.00 0.00 3.41
5525 6158 0.036388 GCTCCATCCACTCCAACGAA 60.036 55.000 0.00 0.00 0.00 3.85
5527 6160 2.778299 CTCCATCCACTCCAACGAAAA 58.222 47.619 0.00 0.00 0.00 2.29
5529 6162 2.105821 TCCATCCACTCCAACGAAAACT 59.894 45.455 0.00 0.00 0.00 2.66
5530 6163 2.884639 CCATCCACTCCAACGAAAACTT 59.115 45.455 0.00 0.00 0.00 2.66
5531 6164 4.069304 CCATCCACTCCAACGAAAACTTA 58.931 43.478 0.00 0.00 0.00 2.24
5532 6165 4.154195 CCATCCACTCCAACGAAAACTTAG 59.846 45.833 0.00 0.00 0.00 2.18
5559 6192 6.128929 GGATAACGCAAATGTTTCCTGAAAAC 60.129 38.462 0.00 0.00 46.22 2.43
5576 6209 0.384309 AACGTTGAGCTGTGAGTCGA 59.616 50.000 0.00 0.00 0.00 4.20
5586 6243 3.318275 AGCTGTGAGTCGACAGTTTTAGA 59.682 43.478 19.50 0.00 44.53 2.10
5608 6265 2.222678 CGGATAACATGAGCACATCTGC 59.777 50.000 0.00 0.00 44.63 4.26
5609 6266 3.208594 GGATAACATGAGCACATCTGCA 58.791 45.455 0.00 0.00 46.97 4.41
5623 6280 3.254166 ACATCTGCACACAAGTTTCATCC 59.746 43.478 0.00 0.00 0.00 3.51
5649 6306 2.831284 GTTGGTGGCCGGTTGTGT 60.831 61.111 1.90 0.00 0.00 3.72
5656 6313 2.258286 GCCGGTTGTGTTGATGCC 59.742 61.111 1.90 0.00 0.00 4.40
5678 6335 4.333649 CCTCTGTTCGCATTTGTGTATCAT 59.666 41.667 0.00 0.00 0.00 2.45
5683 6340 5.523552 TGTTCGCATTTGTGTATCATAGGAG 59.476 40.000 0.00 0.00 0.00 3.69
5708 6367 2.097466 AGTGACTGGAACAAAACAAGCG 59.903 45.455 0.00 0.00 38.70 4.68
5717 6376 4.207019 GGAACAAAACAAGCGAAATGACAG 59.793 41.667 0.00 0.00 0.00 3.51
5719 6378 4.601019 ACAAAACAAGCGAAATGACAGAG 58.399 39.130 0.00 0.00 0.00 3.35
5720 6379 2.977405 AACAAGCGAAATGACAGAGC 57.023 45.000 0.00 0.00 0.00 4.09
5721 6380 1.160137 ACAAGCGAAATGACAGAGCC 58.840 50.000 0.00 0.00 0.00 4.70
5722 6381 0.095935 CAAGCGAAATGACAGAGCCG 59.904 55.000 0.00 0.00 0.00 5.52
5723 6382 1.639298 AAGCGAAATGACAGAGCCGC 61.639 55.000 0.00 0.00 42.52 6.53
5724 6383 2.390599 GCGAAATGACAGAGCCGCA 61.391 57.895 0.00 0.00 41.89 5.69
5728 6387 2.589014 GAAATGACAGAGCCGCAAAAG 58.411 47.619 0.00 0.00 0.00 2.27
5729 6388 1.609208 AATGACAGAGCCGCAAAAGT 58.391 45.000 0.00 0.00 0.00 2.66
5730 6389 1.160137 ATGACAGAGCCGCAAAAGTC 58.840 50.000 0.00 0.00 0.00 3.01
5731 6390 0.179059 TGACAGAGCCGCAAAAGTCA 60.179 50.000 0.00 0.00 34.02 3.41
5733 6392 0.179045 ACAGAGCCGCAAAAGTCACT 60.179 50.000 0.00 0.00 0.00 3.41
5734 6393 0.236711 CAGAGCCGCAAAAGTCACTG 59.763 55.000 0.00 0.00 0.00 3.66
5735 6394 0.106708 AGAGCCGCAAAAGTCACTGA 59.893 50.000 0.00 0.00 0.00 3.41
5736 6395 1.160137 GAGCCGCAAAAGTCACTGAT 58.840 50.000 0.00 0.00 0.00 2.90
5737 6396 0.877071 AGCCGCAAAAGTCACTGATG 59.123 50.000 0.00 0.00 0.00 3.07
5740 6428 2.076100 CCGCAAAAGTCACTGATGCTA 58.924 47.619 12.01 0.00 34.93 3.49
5747 6435 2.752121 AGTCACTGATGCTATGATGCG 58.248 47.619 0.00 0.00 35.36 4.73
5770 6467 4.362476 ACGACGGTTACCACGCCC 62.362 66.667 15.38 0.00 34.00 6.13
5801 6498 4.320202 CCAGTTTTGTGGATTCGTCGAAAT 60.320 41.667 12.40 0.72 40.44 2.17
5802 6499 5.212194 CAGTTTTGTGGATTCGTCGAAATT 58.788 37.500 12.40 0.00 0.00 1.82
5805 6502 6.754675 AGTTTTGTGGATTCGTCGAAATTTTT 59.245 30.769 12.40 0.00 0.00 1.94
5806 6503 6.741448 TTTGTGGATTCGTCGAAATTTTTC 57.259 33.333 12.40 4.40 0.00 2.29
5807 6504 5.425577 TGTGGATTCGTCGAAATTTTTCA 57.574 34.783 12.40 0.00 37.01 2.69
5813 6510 5.637006 TTCGTCGAAATTTTTCATGGGAT 57.363 34.783 4.91 0.00 37.01 3.85
5816 6513 4.675146 CGTCGAAATTTTTCATGGGATGCT 60.675 41.667 4.12 0.00 37.01 3.79
5826 6523 1.622607 ATGGGATGCTCCGGACGAAA 61.623 55.000 0.00 0.00 37.43 3.46
5827 6524 1.521681 GGGATGCTCCGGACGAAAG 60.522 63.158 0.00 0.00 37.43 2.62
5828 6525 2.240162 GGGATGCTCCGGACGAAAGT 62.240 60.000 0.00 0.00 42.98 2.66
5829 6526 3.709966 GGGATGCTCCGGACGAAAGTT 62.710 57.143 0.00 0.00 40.93 2.66
5841 6538 0.110644 CGAAAGTTTCGCAGTGGAGC 60.111 55.000 23.72 0.00 46.97 4.70
5849 6546 2.050985 GCAGTGGAGCGCAAACAC 60.051 61.111 11.47 15.47 35.43 3.32
5850 6547 2.639286 CAGTGGAGCGCAAACACC 59.361 61.111 20.52 11.59 35.79 4.16
5851 6548 2.594592 AGTGGAGCGCAAACACCC 60.595 61.111 20.52 8.31 35.79 4.61
5852 6549 2.904866 GTGGAGCGCAAACACCCA 60.905 61.111 11.47 3.77 0.00 4.51
5853 6550 2.124109 TGGAGCGCAAACACCCAA 60.124 55.556 11.47 0.00 0.00 4.12
5854 6551 1.754621 TGGAGCGCAAACACCCAAA 60.755 52.632 11.47 0.00 0.00 3.28
5855 6552 1.112315 TGGAGCGCAAACACCCAAAT 61.112 50.000 11.47 0.00 0.00 2.32
5856 6553 0.667184 GGAGCGCAAACACCCAAATG 60.667 55.000 11.47 0.00 0.00 2.32
5857 6554 0.313672 GAGCGCAAACACCCAAATGA 59.686 50.000 11.47 0.00 0.00 2.57
5858 6555 0.749649 AGCGCAAACACCCAAATGAA 59.250 45.000 11.47 0.00 0.00 2.57
5859 6556 1.344114 AGCGCAAACACCCAAATGAAT 59.656 42.857 11.47 0.00 0.00 2.57
5860 6557 1.460359 GCGCAAACACCCAAATGAATG 59.540 47.619 0.30 0.00 0.00 2.67
5861 6558 2.067766 CGCAAACACCCAAATGAATGG 58.932 47.619 0.00 0.00 40.35 3.16
5862 6559 2.288702 CGCAAACACCCAAATGAATGGA 60.289 45.455 0.00 0.00 43.54 3.41
5863 6560 3.617045 CGCAAACACCCAAATGAATGGAT 60.617 43.478 0.00 0.00 43.54 3.41
5864 6561 3.685756 GCAAACACCCAAATGAATGGATG 59.314 43.478 0.00 0.00 43.54 3.51
5866 6563 5.568423 GCAAACACCCAAATGAATGGATGTA 60.568 40.000 0.00 0.00 46.99 2.29
5867 6564 6.642430 CAAACACCCAAATGAATGGATGTAT 58.358 36.000 0.00 0.00 46.99 2.29
5868 6565 5.857471 ACACCCAAATGAATGGATGTATG 57.143 39.130 0.00 0.00 45.78 2.39
5869 6566 4.099881 ACACCCAAATGAATGGATGTATGC 59.900 41.667 0.00 0.00 45.78 3.14
5870 6567 4.342951 CACCCAAATGAATGGATGTATGCT 59.657 41.667 0.00 0.00 43.54 3.79
5871 6568 4.964262 ACCCAAATGAATGGATGTATGCTT 59.036 37.500 0.00 0.00 43.54 3.91
5872 6569 5.426185 ACCCAAATGAATGGATGTATGCTTT 59.574 36.000 0.00 0.00 43.54 3.51
5873 6570 6.070078 ACCCAAATGAATGGATGTATGCTTTT 60.070 34.615 0.00 0.00 43.54 2.27
5874 6571 7.125507 ACCCAAATGAATGGATGTATGCTTTTA 59.874 33.333 0.00 0.00 43.54 1.52
5875 6572 7.439056 CCCAAATGAATGGATGTATGCTTTTAC 59.561 37.037 0.00 0.00 43.54 2.01
5876 6573 7.167968 CCAAATGAATGGATGTATGCTTTTACG 59.832 37.037 0.00 0.00 43.54 3.18
5877 6574 6.942532 ATGAATGGATGTATGCTTTTACGT 57.057 33.333 0.00 0.00 0.00 3.57
5878 6575 6.117911 TGAATGGATGTATGCTTTTACGTG 57.882 37.500 0.00 0.00 0.00 4.49
5879 6576 5.645929 TGAATGGATGTATGCTTTTACGTGT 59.354 36.000 0.00 0.00 0.00 4.49
5880 6577 6.150307 TGAATGGATGTATGCTTTTACGTGTT 59.850 34.615 0.00 0.00 0.00 3.32
5881 6578 7.334671 TGAATGGATGTATGCTTTTACGTGTTA 59.665 33.333 0.00 0.00 0.00 2.41
5882 6579 6.411630 TGGATGTATGCTTTTACGTGTTAC 57.588 37.500 0.00 0.00 0.00 2.50
5883 6580 5.932883 TGGATGTATGCTTTTACGTGTTACA 59.067 36.000 0.00 0.00 0.00 2.41
5884 6581 6.427242 TGGATGTATGCTTTTACGTGTTACAA 59.573 34.615 0.00 0.00 0.00 2.41
5885 6582 7.041303 TGGATGTATGCTTTTACGTGTTACAAA 60.041 33.333 0.00 0.00 0.00 2.83
5886 6583 7.269724 GGATGTATGCTTTTACGTGTTACAAAC 59.730 37.037 0.00 0.00 0.00 2.93
5887 6584 6.128066 TGTATGCTTTTACGTGTTACAAACG 58.872 36.000 0.00 0.00 46.32 3.60
5892 6589 4.482507 CGTGTTACAAACGTGCCG 57.517 55.556 0.00 0.00 36.31 5.69
5893 6590 1.637402 CGTGTTACAAACGTGCCGT 59.363 52.632 0.00 0.00 43.97 5.68
5905 6602 3.648339 ACGTGCCGTTTTTACTCTAGA 57.352 42.857 0.00 0.00 36.35 2.43
5906 6603 3.311966 ACGTGCCGTTTTTACTCTAGAC 58.688 45.455 0.00 0.00 36.35 2.59
5907 6604 2.665052 CGTGCCGTTTTTACTCTAGACC 59.335 50.000 0.00 0.00 0.00 3.85
5908 6605 3.613432 CGTGCCGTTTTTACTCTAGACCT 60.613 47.826 0.00 0.00 0.00 3.85
5909 6606 3.925299 GTGCCGTTTTTACTCTAGACCTC 59.075 47.826 0.00 0.00 0.00 3.85
5910 6607 3.830755 TGCCGTTTTTACTCTAGACCTCT 59.169 43.478 0.00 0.00 0.00 3.69
5911 6608 5.012239 TGCCGTTTTTACTCTAGACCTCTA 58.988 41.667 0.00 0.00 0.00 2.43
5912 6609 5.125097 TGCCGTTTTTACTCTAGACCTCTAG 59.875 44.000 3.25 3.25 45.57 2.43
5913 6610 5.125257 GCCGTTTTTACTCTAGACCTCTAGT 59.875 44.000 8.83 0.00 44.74 2.57
5914 6611 6.553524 CCGTTTTTACTCTAGACCTCTAGTG 58.446 44.000 8.83 8.94 44.74 2.74
5915 6612 6.404513 CCGTTTTTACTCTAGACCTCTAGTGG 60.405 46.154 9.34 9.34 44.74 4.00
5916 6613 6.373774 CGTTTTTACTCTAGACCTCTAGTGGA 59.626 42.308 17.66 4.79 44.74 4.02
5917 6614 7.094463 CGTTTTTACTCTAGACCTCTAGTGGAA 60.094 40.741 17.66 9.58 44.74 3.53
5918 6615 8.583296 GTTTTTACTCTAGACCTCTAGTGGAAA 58.417 37.037 17.66 14.04 44.55 3.13
5919 6616 8.896722 TTTTACTCTAGACCTCTAGTGGAAAT 57.103 34.615 17.66 5.35 45.07 2.17
5920 6617 7.883391 TTACTCTAGACCTCTAGTGGAAATG 57.117 40.000 17.66 5.35 44.74 2.32
5921 6618 5.205056 ACTCTAGACCTCTAGTGGAAATGG 58.795 45.833 17.66 5.09 44.74 3.16
5922 6619 5.044030 ACTCTAGACCTCTAGTGGAAATGGA 60.044 44.000 17.66 8.65 44.74 3.41
5923 6620 5.838955 TCTAGACCTCTAGTGGAAATGGAA 58.161 41.667 17.66 0.00 44.74 3.53
5924 6621 6.444704 TCTAGACCTCTAGTGGAAATGGAAT 58.555 40.000 17.66 0.00 44.74 3.01
5925 6622 5.622346 AGACCTCTAGTGGAAATGGAATC 57.378 43.478 17.66 2.19 0.00 2.52
5926 6623 4.410555 AGACCTCTAGTGGAAATGGAATCC 59.589 45.833 17.66 0.00 37.48 3.01
5927 6624 3.459969 ACCTCTAGTGGAAATGGAATCCC 59.540 47.826 17.66 0.00 36.04 3.85
5929 6626 4.455606 CTCTAGTGGAAATGGAATCCCAC 58.544 47.826 0.00 0.00 46.98 4.61
5931 6628 1.485124 GTGGAAATGGAATCCCACCC 58.515 55.000 0.00 0.00 46.98 4.61
5932 6629 0.033601 TGGAAATGGAATCCCACCCG 60.034 55.000 0.00 0.00 46.98 5.28
5933 6630 0.755327 GGAAATGGAATCCCACCCGG 60.755 60.000 0.00 0.00 46.98 5.73
5934 6631 1.381191 AAATGGAATCCCACCCGGC 60.381 57.895 0.00 0.00 46.98 6.13
5935 6632 2.871795 AAATGGAATCCCACCCGGCC 62.872 60.000 0.00 0.00 46.98 6.13
5944 6641 4.636435 CACCCGGCCCGAAGTGTT 62.636 66.667 3.71 0.00 0.00 3.32
5945 6642 4.324991 ACCCGGCCCGAAGTGTTC 62.325 66.667 3.71 0.00 0.00 3.18
5946 6643 4.016706 CCCGGCCCGAAGTGTTCT 62.017 66.667 3.71 0.00 0.00 3.01
5947 6644 2.434359 CCGGCCCGAAGTGTTCTC 60.434 66.667 3.71 0.00 0.00 2.87
5948 6645 2.809601 CGGCCCGAAGTGTTCTCG 60.810 66.667 0.00 0.00 0.00 4.04
5949 6646 2.654877 GGCCCGAAGTGTTCTCGA 59.345 61.111 0.00 0.00 0.00 4.04
5950 6647 1.446272 GGCCCGAAGTGTTCTCGAG 60.446 63.158 5.93 5.93 0.00 4.04
5951 6648 2.095252 GCCCGAAGTGTTCTCGAGC 61.095 63.158 7.81 0.00 0.00 5.03
5952 6649 1.801913 CCCGAAGTGTTCTCGAGCG 60.802 63.158 7.81 3.32 0.00 5.03
5953 6650 2.437343 CCGAAGTGTTCTCGAGCGC 61.437 63.158 7.81 0.00 0.00 5.92
5954 6651 2.437343 CGAAGTGTTCTCGAGCGCC 61.437 63.158 7.81 0.00 0.00 6.53
5955 6652 2.048127 AAGTGTTCTCGAGCGCCC 60.048 61.111 7.81 0.00 0.00 6.13
5956 6653 3.591254 AAGTGTTCTCGAGCGCCCC 62.591 63.158 7.81 0.00 0.00 5.80
5959 6656 4.821589 GTTCTCGAGCGCCCCCAG 62.822 72.222 7.81 0.00 0.00 4.45
5961 6658 4.841617 TCTCGAGCGCCCCCAGAT 62.842 66.667 7.81 0.00 0.00 2.90
5962 6659 4.598894 CTCGAGCGCCCCCAGATG 62.599 72.222 2.29 0.00 0.00 2.90
5964 6661 4.899239 CGAGCGCCCCCAGATGTC 62.899 72.222 2.29 0.00 0.00 3.06
5965 6662 4.899239 GAGCGCCCCCAGATGTCG 62.899 72.222 2.29 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.665185 AAACTCCGTGAGCACCGC 60.665 61.111 1.36 0.00 32.04 5.68
20 21 1.006102 AGAAACTCCGTGAGCACCG 60.006 57.895 1.36 0.00 32.04 4.94
21 22 0.670854 GGAGAAACTCCGTGAGCACC 60.671 60.000 1.97 0.00 41.08 5.01
22 23 2.828933 GGAGAAACTCCGTGAGCAC 58.171 57.895 1.97 0.00 41.08 4.40
31 32 7.923414 TGCCTTTTCTTAATAGGAGAAACTC 57.077 36.000 0.00 0.00 41.42 3.01
32 33 7.094762 CGTTGCCTTTTCTTAATAGGAGAAACT 60.095 37.037 0.00 0.00 41.42 2.66
33 34 7.021790 CGTTGCCTTTTCTTAATAGGAGAAAC 58.978 38.462 0.00 0.00 41.42 2.78
34 35 6.938030 TCGTTGCCTTTTCTTAATAGGAGAAA 59.062 34.615 0.00 0.00 40.36 2.52
35 36 6.469410 TCGTTGCCTTTTCTTAATAGGAGAA 58.531 36.000 0.00 0.00 0.00 2.87
36 37 6.045072 TCGTTGCCTTTTCTTAATAGGAGA 57.955 37.500 0.00 0.00 0.00 3.71
37 38 5.294552 CCTCGTTGCCTTTTCTTAATAGGAG 59.705 44.000 0.00 0.00 0.00 3.69
38 39 5.183228 CCTCGTTGCCTTTTCTTAATAGGA 58.817 41.667 0.00 0.00 0.00 2.94
39 40 4.335594 CCCTCGTTGCCTTTTCTTAATAGG 59.664 45.833 0.00 0.00 0.00 2.57
40 41 4.941873 ACCCTCGTTGCCTTTTCTTAATAG 59.058 41.667 0.00 0.00 0.00 1.73
41 42 4.913784 ACCCTCGTTGCCTTTTCTTAATA 58.086 39.130 0.00 0.00 0.00 0.98
42 43 3.763057 ACCCTCGTTGCCTTTTCTTAAT 58.237 40.909 0.00 0.00 0.00 1.40
43 44 3.217681 ACCCTCGTTGCCTTTTCTTAA 57.782 42.857 0.00 0.00 0.00 1.85
44 45 2.943036 ACCCTCGTTGCCTTTTCTTA 57.057 45.000 0.00 0.00 0.00 2.10
45 46 2.067365 AACCCTCGTTGCCTTTTCTT 57.933 45.000 0.00 0.00 0.00 2.52
46 47 2.779506 CTAACCCTCGTTGCCTTTTCT 58.220 47.619 0.00 0.00 33.17 2.52
47 48 1.199327 GCTAACCCTCGTTGCCTTTTC 59.801 52.381 0.00 0.00 33.17 2.29
48 49 1.202891 AGCTAACCCTCGTTGCCTTTT 60.203 47.619 0.00 0.00 33.17 2.27
49 50 0.400594 AGCTAACCCTCGTTGCCTTT 59.599 50.000 0.00 0.00 33.17 3.11
50 51 0.036294 GAGCTAACCCTCGTTGCCTT 60.036 55.000 0.00 0.00 33.17 4.35
51 52 0.905337 AGAGCTAACCCTCGTTGCCT 60.905 55.000 0.00 0.00 36.95 4.75
52 53 0.036294 AAGAGCTAACCCTCGTTGCC 60.036 55.000 0.00 0.00 36.95 4.52
53 54 1.079503 CAAGAGCTAACCCTCGTTGC 58.920 55.000 0.00 0.00 36.95 4.17
54 55 1.676014 CCCAAGAGCTAACCCTCGTTG 60.676 57.143 0.00 0.00 36.95 4.10
55 56 0.613777 CCCAAGAGCTAACCCTCGTT 59.386 55.000 0.00 0.00 36.95 3.85
56 57 0.544595 ACCCAAGAGCTAACCCTCGT 60.545 55.000 0.00 0.00 36.95 4.18
57 58 0.613777 AACCCAAGAGCTAACCCTCG 59.386 55.000 0.00 0.00 36.95 4.63
58 59 1.340114 CCAACCCAAGAGCTAACCCTC 60.340 57.143 0.00 0.00 0.00 4.30
59 60 0.698818 CCAACCCAAGAGCTAACCCT 59.301 55.000 0.00 0.00 0.00 4.34
60 61 0.404426 ACCAACCCAAGAGCTAACCC 59.596 55.000 0.00 0.00 0.00 4.11
61 62 1.351350 AGACCAACCCAAGAGCTAACC 59.649 52.381 0.00 0.00 0.00 2.85
62 63 2.038557 TGAGACCAACCCAAGAGCTAAC 59.961 50.000 0.00 0.00 0.00 2.34
63 64 2.334977 TGAGACCAACCCAAGAGCTAA 58.665 47.619 0.00 0.00 0.00 3.09
64 65 2.024176 TGAGACCAACCCAAGAGCTA 57.976 50.000 0.00 0.00 0.00 3.32
65 66 1.366319 ATGAGACCAACCCAAGAGCT 58.634 50.000 0.00 0.00 0.00 4.09
66 67 2.206576 AATGAGACCAACCCAAGAGC 57.793 50.000 0.00 0.00 0.00 4.09
67 68 4.584325 TCAAAAATGAGACCAACCCAAGAG 59.416 41.667 0.00 0.00 0.00 2.85
68 69 4.541705 TCAAAAATGAGACCAACCCAAGA 58.458 39.130 0.00 0.00 0.00 3.02
69 70 4.935352 TCAAAAATGAGACCAACCCAAG 57.065 40.909 0.00 0.00 0.00 3.61
70 71 4.898265 TCATCAAAAATGAGACCAACCCAA 59.102 37.500 0.00 0.00 0.00 4.12
71 72 4.478203 TCATCAAAAATGAGACCAACCCA 58.522 39.130 0.00 0.00 0.00 4.51
72 73 5.011023 AGTTCATCAAAAATGAGACCAACCC 59.989 40.000 0.00 0.00 0.00 4.11
73 74 5.922544 CAGTTCATCAAAAATGAGACCAACC 59.077 40.000 0.00 0.00 0.00 3.77
74 75 5.922544 CCAGTTCATCAAAAATGAGACCAAC 59.077 40.000 0.00 0.00 0.00 3.77
75 76 5.832595 TCCAGTTCATCAAAAATGAGACCAA 59.167 36.000 0.00 0.00 0.00 3.67
76 77 5.384336 TCCAGTTCATCAAAAATGAGACCA 58.616 37.500 0.00 0.00 0.00 4.02
77 78 5.964958 TCCAGTTCATCAAAAATGAGACC 57.035 39.130 0.00 0.00 0.00 3.85
81 82 9.859427 GTGATATTTCCAGTTCATCAAAAATGA 57.141 29.630 0.00 0.00 0.00 2.57
82 83 9.865321 AGTGATATTTCCAGTTCATCAAAAATG 57.135 29.630 0.00 0.00 0.00 2.32
83 84 9.865321 CAGTGATATTTCCAGTTCATCAAAAAT 57.135 29.630 0.00 0.00 0.00 1.82
84 85 8.859090 ACAGTGATATTTCCAGTTCATCAAAAA 58.141 29.630 0.00 0.00 0.00 1.94
85 86 8.408043 ACAGTGATATTTCCAGTTCATCAAAA 57.592 30.769 0.00 0.00 0.00 2.44
86 87 7.148423 CGACAGTGATATTTCCAGTTCATCAAA 60.148 37.037 0.00 0.00 0.00 2.69
87 88 6.313658 CGACAGTGATATTTCCAGTTCATCAA 59.686 38.462 0.00 0.00 0.00 2.57
88 89 5.812127 CGACAGTGATATTTCCAGTTCATCA 59.188 40.000 0.00 0.00 0.00 3.07
89 90 5.277058 GCGACAGTGATATTTCCAGTTCATC 60.277 44.000 0.00 0.00 0.00 2.92
90 91 4.572389 GCGACAGTGATATTTCCAGTTCAT 59.428 41.667 0.00 0.00 0.00 2.57
91 92 3.932710 GCGACAGTGATATTTCCAGTTCA 59.067 43.478 0.00 0.00 0.00 3.18
92 93 4.184629 AGCGACAGTGATATTTCCAGTTC 58.815 43.478 0.00 0.00 0.00 3.01
93 94 4.081420 AGAGCGACAGTGATATTTCCAGTT 60.081 41.667 0.00 0.00 0.00 3.16
94 95 3.449018 AGAGCGACAGTGATATTTCCAGT 59.551 43.478 0.00 0.00 0.00 4.00
95 96 4.052159 AGAGCGACAGTGATATTTCCAG 57.948 45.455 0.00 0.00 0.00 3.86
96 97 5.348986 GTTAGAGCGACAGTGATATTTCCA 58.651 41.667 0.00 0.00 0.00 3.53
97 98 4.745620 GGTTAGAGCGACAGTGATATTTCC 59.254 45.833 0.00 0.00 0.00 3.13
98 99 5.348986 TGGTTAGAGCGACAGTGATATTTC 58.651 41.667 0.00 0.00 0.00 2.17
99 100 5.339008 TGGTTAGAGCGACAGTGATATTT 57.661 39.130 0.00 0.00 0.00 1.40
100 101 5.303078 AGATGGTTAGAGCGACAGTGATATT 59.697 40.000 0.00 0.00 0.00 1.28
101 102 4.830046 AGATGGTTAGAGCGACAGTGATAT 59.170 41.667 0.00 0.00 0.00 1.63
102 103 4.207955 AGATGGTTAGAGCGACAGTGATA 58.792 43.478 0.00 0.00 0.00 2.15
103 104 3.027412 AGATGGTTAGAGCGACAGTGAT 58.973 45.455 0.00 0.00 0.00 3.06
104 105 2.447443 AGATGGTTAGAGCGACAGTGA 58.553 47.619 0.00 0.00 0.00 3.41
105 106 2.949451 AGATGGTTAGAGCGACAGTG 57.051 50.000 0.00 0.00 0.00 3.66
106 107 4.261238 CGATTAGATGGTTAGAGCGACAGT 60.261 45.833 0.00 0.00 0.00 3.55
107 108 4.222886 CGATTAGATGGTTAGAGCGACAG 58.777 47.826 0.00 0.00 0.00 3.51
108 109 3.550233 GCGATTAGATGGTTAGAGCGACA 60.550 47.826 0.00 0.00 0.00 4.35
109 110 2.981140 GCGATTAGATGGTTAGAGCGAC 59.019 50.000 0.00 0.00 0.00 5.19
110 111 2.621526 TGCGATTAGATGGTTAGAGCGA 59.378 45.455 0.00 0.00 0.00 4.93
111 112 3.013276 TGCGATTAGATGGTTAGAGCG 57.987 47.619 0.00 0.00 0.00 5.03
112 113 4.372656 ACTTGCGATTAGATGGTTAGAGC 58.627 43.478 0.00 0.00 0.00 4.09
129 130 1.145803 ACTTCCGCGAACTAACTTGC 58.854 50.000 8.23 0.00 0.00 4.01
132 133 3.737774 GTGTTTACTTCCGCGAACTAACT 59.262 43.478 8.23 0.00 0.00 2.24
136 137 2.132762 CAGTGTTTACTTCCGCGAACT 58.867 47.619 8.23 0.00 34.07 3.01
147 148 3.816994 AGGGTCTTCCAACAGTGTTTAC 58.183 45.455 5.57 0.22 38.24 2.01
150 151 3.009143 GGATAGGGTCTTCCAACAGTGTT 59.991 47.826 1.64 1.64 38.24 3.32
191 192 6.299966 CGTAATTGCTTTCGACTTTTGTAGTG 59.700 38.462 0.00 0.00 37.17 2.74
204 205 2.223044 CGAGGGCTTCGTAATTGCTTTC 60.223 50.000 11.22 0.00 44.27 2.62
303 308 3.007182 TCGTTTGATTCCCTCGTTTACCT 59.993 43.478 0.00 0.00 0.00 3.08
305 310 4.142966 CCTTCGTTTGATTCCCTCGTTTAC 60.143 45.833 0.00 0.00 0.00 2.01
308 313 2.038033 TCCTTCGTTTGATTCCCTCGTT 59.962 45.455 0.00 0.00 0.00 3.85
309 314 1.621814 TCCTTCGTTTGATTCCCTCGT 59.378 47.619 0.00 0.00 0.00 4.18
310 315 2.380084 TCCTTCGTTTGATTCCCTCG 57.620 50.000 0.00 0.00 0.00 4.63
323 336 6.594159 ACGGCTGGATAATAATATTTCCTTCG 59.406 38.462 0.00 8.21 0.00 3.79
341 354 2.335712 GCTTTGAAGGGACGGCTGG 61.336 63.158 0.00 0.00 0.00 4.85
458 475 8.607441 TTTGGACCGATGATGATAAGAATTAG 57.393 34.615 0.00 0.00 31.76 1.73
460 477 7.880160 TTTTGGACCGATGATGATAAGAATT 57.120 32.000 0.00 0.00 0.00 2.17
490 508 2.030274 GTCGAATTTGGGTTGGTGAAGG 60.030 50.000 0.00 0.00 0.00 3.46
508 526 5.047188 AGGTAGTTTTGCCAAATTTTGTCG 58.953 37.500 8.26 0.00 0.00 4.35
556 574 7.016153 AGAAGACAGACTCTTTCTCTCTCTA 57.984 40.000 0.00 0.00 39.53 2.43
566 629 5.164954 GTTGCGATAAGAAGACAGACTCTT 58.835 41.667 0.00 0.00 42.40 2.85
604 667 3.005554 CTCATCATCACCACTTCACCAC 58.994 50.000 0.00 0.00 0.00 4.16
634 697 1.559149 TTCGTTTTAGGTGCCGCGAC 61.559 55.000 8.23 0.00 0.00 5.19
692 755 0.519519 TGGTTTTGAATCGCGCGAAT 59.480 45.000 38.07 30.45 0.00 3.34
718 781 0.755327 CCGTGGGGATTGGGGAATTC 60.755 60.000 0.00 0.00 34.06 2.17
759 822 1.404391 AGTTCGGATATGTCGTTCGCT 59.596 47.619 0.00 0.00 0.00 4.93
760 823 1.779724 GAGTTCGGATATGTCGTTCGC 59.220 52.381 0.00 0.00 0.00 4.70
761 824 2.033049 AGGAGTTCGGATATGTCGTTCG 59.967 50.000 0.00 0.00 0.00 3.95
762 825 3.066342 TGAGGAGTTCGGATATGTCGTTC 59.934 47.826 0.00 0.00 0.00 3.95
795 858 4.357279 ACCTGCCTGGCTTGCTCC 62.357 66.667 21.03 0.00 40.22 4.70
849 916 4.988598 CGGGGGCGATCGGATTGG 62.989 72.222 18.30 0.00 0.00 3.16
949 1016 2.665185 AACTCCGCGGCAGTCAAC 60.665 61.111 23.51 0.00 0.00 3.18
968 1035 0.325765 ACTGCTACTCCTCCCTTCCC 60.326 60.000 0.00 0.00 0.00 3.97
971 1038 3.964031 CAATCTACTGCTACTCCTCCCTT 59.036 47.826 0.00 0.00 0.00 3.95
972 1039 3.571590 CAATCTACTGCTACTCCTCCCT 58.428 50.000 0.00 0.00 0.00 4.20
973 1040 2.630580 CCAATCTACTGCTACTCCTCCC 59.369 54.545 0.00 0.00 0.00 4.30
975 1042 3.003897 CGACCAATCTACTGCTACTCCTC 59.996 52.174 0.00 0.00 0.00 3.71
978 1045 2.099263 TGCGACCAATCTACTGCTACTC 59.901 50.000 0.00 0.00 0.00 2.59
979 1046 2.100197 TGCGACCAATCTACTGCTACT 58.900 47.619 0.00 0.00 0.00 2.57
980 1047 2.579207 TGCGACCAATCTACTGCTAC 57.421 50.000 0.00 0.00 0.00 3.58
981 1048 3.457234 CATTGCGACCAATCTACTGCTA 58.543 45.455 0.00 0.00 39.60 3.49
982 1049 2.283298 CATTGCGACCAATCTACTGCT 58.717 47.619 0.00 0.00 39.60 4.24
983 1050 1.331756 CCATTGCGACCAATCTACTGC 59.668 52.381 0.00 0.00 39.60 4.40
984 1051 1.331756 GCCATTGCGACCAATCTACTG 59.668 52.381 0.00 0.00 39.60 2.74
1446 1534 2.266055 CAGAGGGTGCGGAAGACC 59.734 66.667 0.00 0.00 0.00 3.85
1570 1658 4.131088 GAGGTGGGTCTCGACGGC 62.131 72.222 0.00 0.00 0.00 5.68
1864 1952 3.453070 GAGATGGCGTGGGAGAGGC 62.453 68.421 0.00 0.00 34.52 4.70
1865 1953 2.801631 GGAGATGGCGTGGGAGAGG 61.802 68.421 0.00 0.00 0.00 3.69
1866 1954 1.743321 GAGGAGATGGCGTGGGAGAG 61.743 65.000 0.00 0.00 0.00 3.20
1935 2023 0.029834 CTTGCGGTATGCTCATTGGC 59.970 55.000 0.00 0.00 46.63 4.52
2061 2149 0.593618 TCTCTGTGAGTGACTCGTGC 59.406 55.000 8.23 1.64 32.35 5.34
2237 2330 0.679640 CCCAGGCTGCGTTTTGGATA 60.680 55.000 9.56 0.00 32.34 2.59
2241 2334 2.912025 ACCCCAGGCTGCGTTTTG 60.912 61.111 9.56 0.00 0.00 2.44
2242 2335 1.774894 TAGACCCCAGGCTGCGTTTT 61.775 55.000 9.56 3.09 0.00 2.43
2243 2336 1.562672 ATAGACCCCAGGCTGCGTTT 61.563 55.000 9.56 5.17 0.00 3.60
2244 2337 0.689745 TATAGACCCCAGGCTGCGTT 60.690 55.000 9.56 0.00 0.00 4.84
2245 2338 0.689745 TTATAGACCCCAGGCTGCGT 60.690 55.000 9.56 7.10 0.00 5.24
2246 2339 0.034059 CTTATAGACCCCAGGCTGCG 59.966 60.000 9.56 0.00 0.00 5.18
2247 2340 0.398318 CCTTATAGACCCCAGGCTGC 59.602 60.000 9.56 0.00 0.00 5.25
2249 2342 0.648301 ACCCTTATAGACCCCAGGCT 59.352 55.000 0.00 0.00 0.00 4.58
2251 2344 1.345112 ACCACCCTTATAGACCCCAGG 60.345 57.143 0.00 0.00 0.00 4.45
2252 2345 2.172717 CAACCACCCTTATAGACCCCAG 59.827 54.545 0.00 0.00 0.00 4.45
2253 2346 2.201830 CAACCACCCTTATAGACCCCA 58.798 52.381 0.00 0.00 0.00 4.96
2284 2389 5.319043 AGATTCCACCCTTTACTTGACAA 57.681 39.130 0.00 0.00 0.00 3.18
2293 2398 7.733047 ACTAAAATTACCAAGATTCCACCCTTT 59.267 33.333 0.00 0.00 0.00 3.11
2294 2399 7.246027 ACTAAAATTACCAAGATTCCACCCTT 58.754 34.615 0.00 0.00 0.00 3.95
2410 2708 4.477536 AGGCTCCTGATCTTGTATAGGA 57.522 45.455 0.00 0.00 37.72 2.94
2411 2709 5.047660 GTGTAGGCTCCTGATCTTGTATAGG 60.048 48.000 0.00 0.00 0.00 2.57
2412 2710 5.772672 AGTGTAGGCTCCTGATCTTGTATAG 59.227 44.000 0.00 0.00 0.00 1.31
2413 2711 5.706447 AGTGTAGGCTCCTGATCTTGTATA 58.294 41.667 0.00 0.00 0.00 1.47
2414 2712 4.551671 AGTGTAGGCTCCTGATCTTGTAT 58.448 43.478 0.00 0.00 0.00 2.29
2423 2721 6.472686 AATAGACTAAAGTGTAGGCTCCTG 57.527 41.667 0.00 0.00 34.22 3.86
2453 2751 9.232082 GCGCTGAAATCATGTATATGTTTAAAA 57.768 29.630 0.00 0.00 35.73 1.52
2462 2760 5.277490 GCTCTTTGCGCTGAAATCATGTATA 60.277 40.000 9.73 0.00 0.00 1.47
2488 2786 4.261909 GCTAATACTAAGGCTCTAACGGCA 60.262 45.833 0.00 0.00 0.00 5.69
2489 2787 4.236147 GCTAATACTAAGGCTCTAACGGC 58.764 47.826 0.00 0.00 0.00 5.68
2491 2789 5.105834 ACGCTAATACTAAGGCTCTAACG 57.894 43.478 0.00 0.00 0.00 3.18
2508 2806 6.090358 GTTCTCAAACAAATAGCTGTACGCTA 59.910 38.462 17.53 17.53 43.75 4.26
2513 2811 7.759489 ATTGGTTCTCAAACAAATAGCTGTA 57.241 32.000 0.00 0.00 37.27 2.74
2586 2884 7.246674 ACAAATTATGCCACTACAACTATCG 57.753 36.000 0.00 0.00 0.00 2.92
2672 2970 3.695830 AAAAGAAGGTGTCGGATGCTA 57.304 42.857 0.00 0.00 0.00 3.49
2678 2976 5.941948 ATTCAGTAAAAAGAAGGTGTCGG 57.058 39.130 0.00 0.00 0.00 4.79
2680 2978 8.926715 ACAAAATTCAGTAAAAAGAAGGTGTC 57.073 30.769 0.00 0.00 0.00 3.67
2770 3068 3.553917 GCCTTCGAGCAATTCTAGAGAAC 59.446 47.826 0.00 0.00 36.80 3.01
2899 3199 8.939929 CAAATATGCATCTTCATACGATTAGGT 58.060 33.333 0.19 0.00 32.36 3.08
2906 3206 5.106555 GGACCCAAATATGCATCTTCATACG 60.107 44.000 0.19 0.00 32.36 3.06
2939 3241 9.126151 TCAAAACACATATTTCAGGAACTTGTA 57.874 29.630 0.00 0.00 34.60 2.41
2958 3260 8.410141 CAAGTTGGTCCTAAAAGTATCAAAACA 58.590 33.333 0.00 0.00 0.00 2.83
3054 3357 8.535690 ACTCAATAAGGAGTTTTCTTACTTCG 57.464 34.615 0.00 0.00 45.59 3.79
3088 3393 2.279935 TTGGAAAAGGGCGAGCTTAA 57.720 45.000 0.00 0.00 0.00 1.85
3148 3453 5.753438 ACGACCAAGTATGTGTAATGCATAG 59.247 40.000 0.00 0.00 30.45 2.23
3188 3493 4.965119 AACACTCTCACCAAAAGTTGAC 57.035 40.909 0.00 0.00 0.00 3.18
3250 3602 6.491062 CCAATCCCAGATATGAATACTGCAAA 59.509 38.462 0.00 0.00 0.00 3.68
3254 3690 8.874744 ATTTCCAATCCCAGATATGAATACTG 57.125 34.615 0.00 0.00 0.00 2.74
3327 3768 4.153117 CAGCTATCGGCATAGTGATTTTCC 59.847 45.833 0.00 0.00 44.79 3.13
3329 3770 4.752101 GTCAGCTATCGGCATAGTGATTTT 59.248 41.667 0.00 0.00 44.79 1.82
3473 3915 7.833682 TCTTGATCATAGTGAATTGGCCTAAAA 59.166 33.333 3.32 0.00 0.00 1.52
3474 3916 7.345691 TCTTGATCATAGTGAATTGGCCTAAA 58.654 34.615 3.32 0.00 0.00 1.85
3487 3929 7.134362 AGTGGTCATGAATCTTGATCATAGT 57.866 36.000 13.97 1.92 36.65 2.12
3495 3937 4.713824 ATGCAAGTGGTCATGAATCTTG 57.286 40.909 21.27 21.27 38.60 3.02
3501 3943 5.945191 TGATCTTAAATGCAAGTGGTCATGA 59.055 36.000 0.00 0.00 0.00 3.07
3503 3945 6.839124 TTGATCTTAAATGCAAGTGGTCAT 57.161 33.333 0.00 0.00 0.00 3.06
3507 3949 6.449698 ACACTTTGATCTTAAATGCAAGTGG 58.550 36.000 12.42 0.00 0.00 4.00
3567 4009 4.141846 TGGGAGATGCTCAGTTATGAAGAC 60.142 45.833 0.00 0.00 34.23 3.01
3588 4030 1.376466 CCCCACCAACTGAGACTGG 59.624 63.158 4.22 4.22 38.77 4.00
3687 4129 3.941188 CACCAGGCACTCCACGGT 61.941 66.667 0.00 0.00 40.01 4.83
3791 4236 5.299782 TGGACACACAAGTTATTTTGGGTAC 59.700 40.000 0.00 0.00 42.56 3.34
3867 4346 6.613699 AGAAGGAAATGCCCATAATATGTCA 58.386 36.000 0.00 0.00 37.37 3.58
3962 4447 1.403679 CCGTTTGCCTGTCACTTTTGA 59.596 47.619 0.00 0.00 0.00 2.69
3971 4456 2.203294 GGTGACCCGTTTGCCTGT 60.203 61.111 0.00 0.00 0.00 4.00
4006 4491 2.224378 GCTAAGACTCATATGCTGCCCA 60.224 50.000 0.00 0.00 0.00 5.36
4058 4551 7.226325 GCAAGCATGAAATCTAGTCTATCAACT 59.774 37.037 0.00 0.00 0.00 3.16
4076 4569 8.288208 CCAAAAGATATAGACTTAGCAAGCATG 58.712 37.037 0.00 0.00 0.00 4.06
4104 4597 6.493802 CCCTACTGTCCTTAGTCTGCATATAA 59.506 42.308 0.00 0.00 32.19 0.98
4194 4687 4.141937 TGTGTAGACAGTCTGCTTGAACTT 60.142 41.667 18.37 0.00 30.04 2.66
4215 4708 4.968971 TGCATCATCAGTATCATCCTGT 57.031 40.909 0.00 0.00 0.00 4.00
4218 4711 7.441760 GGAAGATATGCATCATCAGTATCATCC 59.558 40.741 0.19 7.16 34.50 3.51
4299 4792 8.365060 ACCACATGGAAATATCAATTTGAAGA 57.635 30.769 4.53 0.00 35.41 2.87
4302 4795 8.131847 TGAACCACATGGAAATATCAATTTGA 57.868 30.769 4.53 0.75 35.41 2.69
4605 5196 2.222027 GGATTCGGCCCTTGATGTAAG 58.778 52.381 0.00 0.00 36.11 2.34
4625 5216 1.102809 TGGTGTTGCCTGCTTCAGTG 61.103 55.000 0.00 0.00 38.35 3.66
4628 5219 4.162592 CTGGTGTTGCCTGCTTCA 57.837 55.556 0.00 0.00 38.35 3.02
4772 5363 1.198094 TGATTGGGAGCCTTCGTCCA 61.198 55.000 0.00 0.00 35.57 4.02
4895 5486 0.104304 AGAACGAGTTGAGTTGCCGT 59.896 50.000 0.00 0.00 34.74 5.68
4896 5487 0.784778 GAGAACGAGTTGAGTTGCCG 59.215 55.000 0.00 0.00 31.14 5.69
4897 5488 1.865865 TGAGAACGAGTTGAGTTGCC 58.134 50.000 0.00 0.00 31.14 4.52
4898 5489 3.309954 AGTTTGAGAACGAGTTGAGTTGC 59.690 43.478 0.00 0.00 40.75 4.17
4899 5490 4.566759 TGAGTTTGAGAACGAGTTGAGTTG 59.433 41.667 0.00 0.00 40.75 3.16
4900 5491 4.755411 TGAGTTTGAGAACGAGTTGAGTT 58.245 39.130 0.00 0.00 40.75 3.01
4901 5492 4.386867 TGAGTTTGAGAACGAGTTGAGT 57.613 40.909 0.00 0.00 40.75 3.41
4902 5493 4.318404 GCTTGAGTTTGAGAACGAGTTGAG 60.318 45.833 0.00 0.00 40.75 3.02
4903 5494 3.555956 GCTTGAGTTTGAGAACGAGTTGA 59.444 43.478 0.00 0.00 40.75 3.18
4906 5497 3.126831 CTGCTTGAGTTTGAGAACGAGT 58.873 45.455 0.00 0.00 40.75 4.18
4976 5567 0.684535 TCCAGCAACACGAATCCAGA 59.315 50.000 0.00 0.00 0.00 3.86
4978 5569 1.606668 GTTTCCAGCAACACGAATCCA 59.393 47.619 0.00 0.00 0.00 3.41
5050 5641 5.238583 ACGAGTAATTTGGAACAGAGGAAG 58.761 41.667 0.00 0.00 42.39 3.46
5051 5642 5.223449 ACGAGTAATTTGGAACAGAGGAA 57.777 39.130 0.00 0.00 42.39 3.36
5052 5643 4.617530 CGACGAGTAATTTGGAACAGAGGA 60.618 45.833 0.00 0.00 42.39 3.71
5053 5644 3.612860 CGACGAGTAATTTGGAACAGAGG 59.387 47.826 0.00 0.00 42.39 3.69
5054 5645 3.060895 GCGACGAGTAATTTGGAACAGAG 59.939 47.826 0.00 0.00 42.39 3.35
5055 5646 2.991190 GCGACGAGTAATTTGGAACAGA 59.009 45.455 0.00 0.00 42.39 3.41
5056 5647 2.734606 TGCGACGAGTAATTTGGAACAG 59.265 45.455 0.00 0.00 42.39 3.16
5057 5648 2.734606 CTGCGACGAGTAATTTGGAACA 59.265 45.455 0.00 0.00 0.00 3.18
5058 5649 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
5059 5650 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
5060 5651 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
5061 5652 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
5062 5653 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
5063 5654 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
5064 5655 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
5065 5656 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
5066 5657 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
5067 5658 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
5068 5659 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
5069 5660 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
5070 5661 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
5071 5662 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
5072 5663 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
5073 5664 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
5074 5665 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
5075 5666 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
5101 5692 8.700051 GCAGGTATGGATGTATCTAGATGTATT 58.300 37.037 15.79 0.00 0.00 1.89
5102 5693 7.841222 TGCAGGTATGGATGTATCTAGATGTAT 59.159 37.037 15.79 9.11 0.00 2.29
5103 5694 7.122799 GTGCAGGTATGGATGTATCTAGATGTA 59.877 40.741 15.79 4.44 0.00 2.29
5104 5695 6.019108 TGCAGGTATGGATGTATCTAGATGT 58.981 40.000 15.79 1.25 0.00 3.06
5105 5696 6.071165 TGTGCAGGTATGGATGTATCTAGATG 60.071 42.308 15.79 0.00 0.00 2.90
5106 5697 6.019108 TGTGCAGGTATGGATGTATCTAGAT 58.981 40.000 10.73 10.73 0.00 1.98
5107 5698 5.393866 TGTGCAGGTATGGATGTATCTAGA 58.606 41.667 0.00 0.00 0.00 2.43
5108 5699 5.728637 TGTGCAGGTATGGATGTATCTAG 57.271 43.478 0.00 0.00 0.00 2.43
5109 5700 5.602561 ACTTGTGCAGGTATGGATGTATCTA 59.397 40.000 0.00 0.00 0.00 1.98
5110 5701 4.410228 ACTTGTGCAGGTATGGATGTATCT 59.590 41.667 0.00 0.00 0.00 1.98
5111 5702 4.708177 ACTTGTGCAGGTATGGATGTATC 58.292 43.478 0.00 0.00 0.00 2.24
5112 5703 4.778213 ACTTGTGCAGGTATGGATGTAT 57.222 40.909 0.00 0.00 0.00 2.29
5113 5704 5.685520 TTACTTGTGCAGGTATGGATGTA 57.314 39.130 0.00 0.00 0.00 2.29
5114 5705 4.568072 TTACTTGTGCAGGTATGGATGT 57.432 40.909 0.00 0.00 0.00 3.06
5115 5706 5.277490 CGAATTACTTGTGCAGGTATGGATG 60.277 44.000 0.00 0.00 0.00 3.51
5116 5707 4.816385 CGAATTACTTGTGCAGGTATGGAT 59.184 41.667 0.00 0.00 0.00 3.41
5117 5708 4.188462 CGAATTACTTGTGCAGGTATGGA 58.812 43.478 0.00 0.00 0.00 3.41
5118 5709 3.312421 CCGAATTACTTGTGCAGGTATGG 59.688 47.826 0.00 0.00 0.00 2.74
5119 5710 4.188462 TCCGAATTACTTGTGCAGGTATG 58.812 43.478 0.00 0.00 0.00 2.39
5120 5711 4.481368 TCCGAATTACTTGTGCAGGTAT 57.519 40.909 0.00 0.00 0.00 2.73
5121 5712 3.965379 TCCGAATTACTTGTGCAGGTA 57.035 42.857 0.00 0.00 0.00 3.08
5122 5713 2.812011 GTTCCGAATTACTTGTGCAGGT 59.188 45.455 0.00 0.00 0.00 4.00
5123 5714 2.159707 CGTTCCGAATTACTTGTGCAGG 60.160 50.000 0.00 0.00 0.00 4.85
5124 5715 2.734606 TCGTTCCGAATTACTTGTGCAG 59.265 45.455 0.00 0.00 31.06 4.41
5125 5716 2.756829 TCGTTCCGAATTACTTGTGCA 58.243 42.857 0.00 0.00 31.06 4.57
5126 5717 3.424433 CCTTCGTTCCGAATTACTTGTGC 60.424 47.826 0.00 0.00 44.85 4.57
5127 5718 3.124636 CCCTTCGTTCCGAATTACTTGTG 59.875 47.826 0.00 0.00 44.85 3.33
5128 5719 3.007182 TCCCTTCGTTCCGAATTACTTGT 59.993 43.478 0.00 0.00 44.85 3.16
5129 5720 3.592059 TCCCTTCGTTCCGAATTACTTG 58.408 45.455 0.00 0.00 44.85 3.16
5130 5721 3.260128 ACTCCCTTCGTTCCGAATTACTT 59.740 43.478 0.00 0.00 44.85 2.24
5131 5722 2.830321 ACTCCCTTCGTTCCGAATTACT 59.170 45.455 0.00 0.00 44.85 2.24
5132 5723 3.242549 ACTCCCTTCGTTCCGAATTAC 57.757 47.619 0.00 0.00 44.85 1.89
5133 5724 5.603170 AATACTCCCTTCGTTCCGAATTA 57.397 39.130 0.00 0.00 44.85 1.40
5134 5725 4.482952 AATACTCCCTTCGTTCCGAATT 57.517 40.909 0.00 0.00 44.85 2.17
5135 5726 4.482952 AAATACTCCCTTCGTTCCGAAT 57.517 40.909 0.00 0.00 44.85 3.34
5136 5727 3.967332 AAATACTCCCTTCGTTCCGAA 57.033 42.857 0.00 0.00 43.75 4.30
5137 5728 5.603170 AATAAATACTCCCTTCGTTCCGA 57.397 39.130 0.00 0.00 0.00 4.55
5138 5729 5.583457 ACAAATAAATACTCCCTTCGTTCCG 59.417 40.000 0.00 0.00 0.00 4.30
5139 5730 6.997239 ACAAATAAATACTCCCTTCGTTCC 57.003 37.500 0.00 0.00 0.00 3.62
5140 5731 7.120138 TGGAACAAATAAATACTCCCTTCGTTC 59.880 37.037 0.00 0.00 31.92 3.95
5141 5732 6.943718 TGGAACAAATAAATACTCCCTTCGTT 59.056 34.615 0.00 0.00 31.92 3.85
5142 5733 6.478129 TGGAACAAATAAATACTCCCTTCGT 58.522 36.000 0.00 0.00 31.92 3.85
5143 5734 6.995511 TGGAACAAATAAATACTCCCTTCG 57.004 37.500 0.00 0.00 31.92 3.79
5206 5800 5.239306 AGAAATTTCAGCTCACGACATCAAA 59.761 36.000 19.99 0.00 0.00 2.69
5277 5906 2.359975 GGAAAGCACACGAGGGGG 60.360 66.667 0.00 0.00 0.00 5.40
5278 5907 2.359975 GGGAAAGCACACGAGGGG 60.360 66.667 0.00 0.00 0.00 4.79
5279 5908 2.742372 CGGGAAAGCACACGAGGG 60.742 66.667 0.00 0.00 39.16 4.30
5280 5909 0.320073 TAACGGGAAAGCACACGAGG 60.320 55.000 7.17 0.00 39.16 4.63
5283 5912 1.393539 CAGATAACGGGAAAGCACACG 59.606 52.381 0.00 0.00 42.75 4.49
5284 5913 2.423577 ACAGATAACGGGAAAGCACAC 58.576 47.619 0.00 0.00 0.00 3.82
5285 5914 2.851263 ACAGATAACGGGAAAGCACA 57.149 45.000 0.00 0.00 0.00 4.57
5286 5915 5.217895 CTTTACAGATAACGGGAAAGCAC 57.782 43.478 0.00 0.00 35.93 4.40
5289 5918 3.242316 GCGCTTTACAGATAACGGGAAAG 60.242 47.826 0.00 3.87 42.29 2.62
5290 5919 2.674357 GCGCTTTACAGATAACGGGAAA 59.326 45.455 0.00 0.00 0.00 3.13
5291 5920 2.273557 GCGCTTTACAGATAACGGGAA 58.726 47.619 0.00 0.00 0.00 3.97
5292 5921 1.205179 TGCGCTTTACAGATAACGGGA 59.795 47.619 9.73 0.00 0.00 5.14
5293 5922 1.326548 GTGCGCTTTACAGATAACGGG 59.673 52.381 9.73 0.00 0.00 5.28
5294 5923 2.029244 CAGTGCGCTTTACAGATAACGG 59.971 50.000 9.73 0.00 0.00 4.44
5295 5924 2.534939 GCAGTGCGCTTTACAGATAACG 60.535 50.000 9.73 0.00 37.77 3.18
5382 6012 2.804527 CACAAGGGAGATATGATGCACG 59.195 50.000 0.00 0.00 0.00 5.34
5386 6016 3.497103 TGCCACAAGGGAGATATGATG 57.503 47.619 0.00 0.00 40.01 3.07
5390 6020 2.224719 GCAGATGCCACAAGGGAGATAT 60.225 50.000 0.00 0.00 39.29 1.63
5391 6021 1.141657 GCAGATGCCACAAGGGAGATA 59.858 52.381 0.00 0.00 39.29 1.98
5392 6022 0.106819 GCAGATGCCACAAGGGAGAT 60.107 55.000 0.00 0.00 39.29 2.75
5394 6024 3.915575 GCAGATGCCACAAGGGAG 58.084 61.111 0.00 0.00 39.29 4.30
5421 6054 0.664767 ACAGAGACGCGTTTGCTCTC 60.665 55.000 21.98 18.55 41.60 3.20
5480 6113 5.344665 CGTTCTCACTCAAAACAAGCAAAAA 59.655 36.000 0.00 0.00 0.00 1.94
5493 6126 1.877576 ATGGAGCGCGTTCTCACTCA 61.878 55.000 22.36 11.73 34.84 3.41
5515 6148 4.950205 TCCTCTAAGTTTTCGTTGGAGT 57.050 40.909 0.00 0.00 0.00 3.85
5525 6158 7.448748 AACATTTGCGTTATCCTCTAAGTTT 57.551 32.000 0.00 0.00 0.00 2.66
5527 6160 6.093633 GGAAACATTTGCGTTATCCTCTAAGT 59.906 38.462 0.00 0.00 0.00 2.24
5529 6162 6.093495 CAGGAAACATTTGCGTTATCCTCTAA 59.907 38.462 0.00 0.00 35.78 2.10
5530 6163 5.584649 CAGGAAACATTTGCGTTATCCTCTA 59.415 40.000 0.00 0.00 35.78 2.43
5531 6164 4.396166 CAGGAAACATTTGCGTTATCCTCT 59.604 41.667 0.00 0.00 35.78 3.69
5532 6165 4.394920 TCAGGAAACATTTGCGTTATCCTC 59.605 41.667 0.00 0.00 35.78 3.71
5559 6192 0.317854 TGTCGACTCACAGCTCAACG 60.318 55.000 17.92 0.00 0.00 4.10
5576 6209 5.581085 GCTCATGTTATCCGTCTAAAACTGT 59.419 40.000 0.00 0.00 0.00 3.55
5586 6243 3.461061 CAGATGTGCTCATGTTATCCGT 58.539 45.455 5.89 0.00 34.06 4.69
5608 6265 3.480470 ACTGGAGGATGAAACTTGTGTG 58.520 45.455 0.00 0.00 0.00 3.82
5609 6266 3.864789 ACTGGAGGATGAAACTTGTGT 57.135 42.857 0.00 0.00 0.00 3.72
5623 6280 0.673644 CGGCCACCAACTTACTGGAG 60.674 60.000 2.24 0.00 38.96 3.86
5649 6306 3.556817 ATGCGAACAGAGGCATCAA 57.443 47.368 0.00 0.00 46.31 2.57
5656 6313 4.926860 TGATACACAAATGCGAACAGAG 57.073 40.909 0.00 0.00 0.00 3.35
5678 6335 2.158370 TGTTCCAGTCACTCCACTCCTA 60.158 50.000 0.00 0.00 0.00 2.94
5683 6340 3.013921 TGTTTTGTTCCAGTCACTCCAC 58.986 45.455 0.00 0.00 0.00 4.02
5708 6367 2.030805 ACTTTTGCGGCTCTGTCATTTC 60.031 45.455 0.00 0.00 0.00 2.17
5717 6376 1.135859 CATCAGTGACTTTTGCGGCTC 60.136 52.381 0.00 0.00 0.00 4.70
5719 6378 0.730494 GCATCAGTGACTTTTGCGGC 60.730 55.000 0.00 0.00 0.00 6.53
5720 6379 0.877071 AGCATCAGTGACTTTTGCGG 59.123 50.000 10.06 0.00 38.32 5.69
5721 6380 3.371898 TCATAGCATCAGTGACTTTTGCG 59.628 43.478 10.06 0.00 38.32 4.85
5722 6381 4.952262 TCATAGCATCAGTGACTTTTGC 57.048 40.909 8.14 8.14 0.00 3.68
5723 6382 5.271625 GCATCATAGCATCAGTGACTTTTG 58.728 41.667 0.00 0.00 0.00 2.44
5724 6383 4.034858 CGCATCATAGCATCAGTGACTTTT 59.965 41.667 0.00 0.00 0.00 2.27
5728 6387 2.474359 GACGCATCATAGCATCAGTGAC 59.526 50.000 0.00 0.00 0.00 3.67
5729 6388 2.101249 TGACGCATCATAGCATCAGTGA 59.899 45.455 0.00 0.00 31.03 3.41
5730 6389 2.475487 CTGACGCATCATAGCATCAGTG 59.525 50.000 4.08 0.00 46.44 3.66
5731 6390 2.752121 CTGACGCATCATAGCATCAGT 58.248 47.619 4.08 0.00 46.44 3.41
5733 6392 1.688197 TCCTGACGCATCATAGCATCA 59.312 47.619 0.00 0.00 33.94 3.07
5734 6393 2.064762 GTCCTGACGCATCATAGCATC 58.935 52.381 0.00 0.00 33.22 3.91
5735 6394 2.160822 GTCCTGACGCATCATAGCAT 57.839 50.000 0.00 0.00 33.22 3.79
5736 6395 3.667448 GTCCTGACGCATCATAGCA 57.333 52.632 0.00 0.00 33.22 3.49
5747 6435 0.387750 GTGGTAACCGTCGTCCTGAC 60.388 60.000 0.00 0.00 44.53 3.51
5770 6467 5.532557 GAATCCACAAAACTGGGAAAGAAG 58.467 41.667 0.00 0.00 33.73 2.85
5813 6510 2.908817 GAAACTTTCGTCCGGAGCA 58.091 52.632 3.06 0.00 0.00 4.26
5832 6529 2.050985 GTGTTTGCGCTCCACTGC 60.051 61.111 9.73 0.00 0.00 4.40
5833 6530 2.639286 GGTGTTTGCGCTCCACTG 59.361 61.111 9.73 0.00 0.00 3.66
5834 6531 2.594592 GGGTGTTTGCGCTCCACT 60.595 61.111 9.73 0.00 0.00 4.00
5835 6532 2.010582 TTTGGGTGTTTGCGCTCCAC 62.011 55.000 9.73 12.32 0.00 4.02
5836 6533 1.112315 ATTTGGGTGTTTGCGCTCCA 61.112 50.000 9.73 4.04 0.00 3.86
5837 6534 0.667184 CATTTGGGTGTTTGCGCTCC 60.667 55.000 9.73 3.29 0.00 4.70
5838 6535 0.313672 TCATTTGGGTGTTTGCGCTC 59.686 50.000 9.73 0.00 0.00 5.03
5839 6536 0.749649 TTCATTTGGGTGTTTGCGCT 59.250 45.000 9.73 0.00 0.00 5.92
5840 6537 1.460359 CATTCATTTGGGTGTTTGCGC 59.540 47.619 0.00 0.00 0.00 6.09
5841 6538 2.067766 CCATTCATTTGGGTGTTTGCG 58.932 47.619 0.00 0.00 32.80 4.85
5842 6539 3.399440 TCCATTCATTTGGGTGTTTGC 57.601 42.857 0.00 0.00 37.37 3.68
5848 6545 4.549668 AGCATACATCCATTCATTTGGGT 58.450 39.130 0.00 0.00 37.37 4.51
5849 6546 5.540400 AAGCATACATCCATTCATTTGGG 57.460 39.130 0.00 0.00 37.37 4.12
5850 6547 7.167968 CGTAAAAGCATACATCCATTCATTTGG 59.832 37.037 0.00 0.00 38.18 3.28
5851 6548 7.701924 ACGTAAAAGCATACATCCATTCATTTG 59.298 33.333 0.00 0.00 0.00 2.32
5852 6549 7.701924 CACGTAAAAGCATACATCCATTCATTT 59.298 33.333 0.00 0.00 0.00 2.32
5853 6550 7.148086 ACACGTAAAAGCATACATCCATTCATT 60.148 33.333 0.00 0.00 0.00 2.57
5854 6551 6.318648 ACACGTAAAAGCATACATCCATTCAT 59.681 34.615 0.00 0.00 0.00 2.57
5855 6552 5.645929 ACACGTAAAAGCATACATCCATTCA 59.354 36.000 0.00 0.00 0.00 2.57
5856 6553 6.119144 ACACGTAAAAGCATACATCCATTC 57.881 37.500 0.00 0.00 0.00 2.67
5857 6554 6.509418 AACACGTAAAAGCATACATCCATT 57.491 33.333 0.00 0.00 0.00 3.16
5858 6555 6.596106 TGTAACACGTAAAAGCATACATCCAT 59.404 34.615 0.00 0.00 0.00 3.41
5859 6556 5.932883 TGTAACACGTAAAAGCATACATCCA 59.067 36.000 0.00 0.00 0.00 3.41
5860 6557 6.411630 TGTAACACGTAAAAGCATACATCC 57.588 37.500 0.00 0.00 0.00 3.51
5861 6558 7.005857 CGTTTGTAACACGTAAAAGCATACATC 59.994 37.037 0.00 0.00 32.80 3.06
5862 6559 6.793203 CGTTTGTAACACGTAAAAGCATACAT 59.207 34.615 0.00 0.00 32.80 2.29
5863 6560 6.128066 CGTTTGTAACACGTAAAAGCATACA 58.872 36.000 0.00 0.00 32.80 2.29
5864 6561 6.572139 CGTTTGTAACACGTAAAAGCATAC 57.428 37.500 0.00 0.00 32.80 2.39
5887 6584 3.922910 AGGTCTAGAGTAAAAACGGCAC 58.077 45.455 0.00 0.00 0.00 5.01
5888 6585 3.830755 AGAGGTCTAGAGTAAAAACGGCA 59.169 43.478 0.00 0.00 0.00 5.69
5889 6586 4.453177 AGAGGTCTAGAGTAAAAACGGC 57.547 45.455 0.00 0.00 0.00 5.68
5890 6587 6.404513 CCACTAGAGGTCTAGAGTAAAAACGG 60.405 46.154 18.91 3.60 46.80 4.44
5891 6588 6.373774 TCCACTAGAGGTCTAGAGTAAAAACG 59.626 42.308 18.91 0.00 46.80 3.60
5892 6589 7.700022 TCCACTAGAGGTCTAGAGTAAAAAC 57.300 40.000 18.91 0.00 46.80 2.43
5893 6590 8.716674 TTTCCACTAGAGGTCTAGAGTAAAAA 57.283 34.615 18.91 9.27 46.80 1.94
5894 6591 8.750298 CATTTCCACTAGAGGTCTAGAGTAAAA 58.250 37.037 18.91 13.32 46.80 1.52
5895 6592 7.342284 CCATTTCCACTAGAGGTCTAGAGTAAA 59.658 40.741 18.91 11.47 46.80 2.01
5896 6593 6.834451 CCATTTCCACTAGAGGTCTAGAGTAA 59.166 42.308 18.91 10.59 46.80 2.24
5897 6594 6.159928 TCCATTTCCACTAGAGGTCTAGAGTA 59.840 42.308 18.91 0.00 46.80 2.59
5898 6595 5.044030 TCCATTTCCACTAGAGGTCTAGAGT 60.044 44.000 18.91 0.00 46.80 3.24
5899 6596 5.450453 TCCATTTCCACTAGAGGTCTAGAG 58.550 45.833 18.91 11.74 46.80 2.43
5900 6597 5.467668 TCCATTTCCACTAGAGGTCTAGA 57.532 43.478 18.91 0.00 46.80 2.43
5902 6599 5.602978 GGATTCCATTTCCACTAGAGGTCTA 59.397 44.000 6.08 0.00 33.21 2.59
5903 6600 4.410555 GGATTCCATTTCCACTAGAGGTCT 59.589 45.833 6.08 0.00 33.21 3.85
5904 6601 4.445019 GGGATTCCATTTCCACTAGAGGTC 60.445 50.000 6.08 0.00 34.77 3.85
5905 6602 3.459969 GGGATTCCATTTCCACTAGAGGT 59.540 47.826 6.08 0.00 34.77 3.85
5906 6603 3.459598 TGGGATTCCATTTCCACTAGAGG 59.540 47.826 4.80 0.00 38.32 3.69
5907 6604 4.455606 GTGGGATTCCATTTCCACTAGAG 58.544 47.826 0.00 0.00 46.09 2.43
5908 6605 3.202151 GGTGGGATTCCATTTCCACTAGA 59.798 47.826 0.00 0.00 46.09 2.43
5909 6606 3.555966 GGTGGGATTCCATTTCCACTAG 58.444 50.000 0.00 0.00 46.09 2.57
5910 6607 2.243736 GGGTGGGATTCCATTTCCACTA 59.756 50.000 0.00 0.00 46.09 2.74
5911 6608 1.007118 GGGTGGGATTCCATTTCCACT 59.993 52.381 0.00 0.00 46.09 4.00
5912 6609 1.485124 GGGTGGGATTCCATTTCCAC 58.515 55.000 0.00 2.93 46.09 4.02
5913 6610 0.033601 CGGGTGGGATTCCATTTCCA 60.034 55.000 0.00 0.00 46.09 3.53
5914 6611 0.755327 CCGGGTGGGATTCCATTTCC 60.755 60.000 0.00 0.00 46.09 3.13
5915 6612 1.391933 GCCGGGTGGGATTCCATTTC 61.392 60.000 2.18 0.00 46.09 2.17
5916 6613 1.381191 GCCGGGTGGGATTCCATTT 60.381 57.895 2.18 0.00 46.09 2.32
5917 6614 2.278738 GCCGGGTGGGATTCCATT 59.721 61.111 2.18 0.00 46.09 3.16
5918 6615 3.820843 GGCCGGGTGGGATTCCAT 61.821 66.667 2.18 0.00 46.09 3.41
5927 6624 4.636435 AACACTTCGGGCCGGGTG 62.636 66.667 33.65 33.65 37.17 4.61
5928 6625 4.324991 GAACACTTCGGGCCGGGT 62.325 66.667 27.98 21.61 0.00 5.28
5929 6626 3.952628 GAGAACACTTCGGGCCGGG 62.953 68.421 27.98 20.93 34.02 5.73
5930 6627 2.434359 GAGAACACTTCGGGCCGG 60.434 66.667 27.98 13.85 34.02 6.13
5931 6628 2.809601 CGAGAACACTTCGGGCCG 60.810 66.667 22.51 22.51 34.56 6.13
5932 6629 1.446272 CTCGAGAACACTTCGGGCC 60.446 63.158 6.58 0.00 38.54 5.80
5933 6630 4.170723 CTCGAGAACACTTCGGGC 57.829 61.111 6.58 0.00 38.54 6.13
5934 6631 1.801913 CGCTCGAGAACACTTCGGG 60.802 63.158 18.75 0.00 41.38 5.14
5935 6632 2.437343 GCGCTCGAGAACACTTCGG 61.437 63.158 18.75 0.00 38.54 4.30
5936 6633 2.437343 GGCGCTCGAGAACACTTCG 61.437 63.158 18.75 9.36 39.33 3.79
5937 6634 2.095252 GGGCGCTCGAGAACACTTC 61.095 63.158 18.75 0.00 0.00 3.01
5938 6635 2.048127 GGGCGCTCGAGAACACTT 60.048 61.111 18.75 0.00 0.00 3.16
5939 6636 4.070552 GGGGCGCTCGAGAACACT 62.071 66.667 18.75 0.00 0.00 3.55
5942 6639 4.821589 CTGGGGGCGCTCGAGAAC 62.822 72.222 18.75 6.59 0.00 3.01
5944 6641 4.841617 ATCTGGGGGCGCTCGAGA 62.842 66.667 18.75 8.95 0.00 4.04
5945 6642 4.598894 CATCTGGGGGCGCTCGAG 62.599 72.222 8.45 8.45 0.00 4.04
5947 6644 4.899239 GACATCTGGGGGCGCTCG 62.899 72.222 7.64 0.00 0.00 5.03
5948 6645 4.899239 CGACATCTGGGGGCGCTC 62.899 72.222 7.64 1.18 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.