Multiple sequence alignment - TraesCS6A01G237400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G237400 chr6A 100.000 9609 0 0 1 9609 446765131 446755523 0.000000e+00 17745.0
1 TraesCS6A01G237400 chr6A 91.892 111 3 4 4469 4575 309812669 309812561 6.010000e-32 150.0
2 TraesCS6A01G237400 chr6D 94.688 3012 114 12 5790 8763 310129259 310126256 0.000000e+00 4634.0
3 TraesCS6A01G237400 chr6D 95.472 2650 92 6 1868 4493 310132789 310130144 0.000000e+00 4204.0
4 TraesCS6A01G237400 chr6D 95.382 996 22 3 876 1871 310133841 310132870 0.000000e+00 1563.0
5 TraesCS6A01G237400 chr6D 95.182 768 32 5 4943 5708 310130022 310129258 0.000000e+00 1208.0
6 TraesCS6A01G237400 chr6D 88.430 847 73 16 1 824 310134944 310134100 0.000000e+00 998.0
7 TraesCS6A01G237400 chr6D 85.772 492 30 13 9140 9609 310125811 310125338 1.450000e-132 484.0
8 TraesCS6A01G237400 chr6D 93.701 127 7 1 4572 4697 310130162 310130036 1.270000e-43 189.0
9 TraesCS6A01G237400 chr6D 82.474 194 6 8 8892 9085 310126075 310125910 2.800000e-30 145.0
10 TraesCS6A01G237400 chr6D 94.444 90 3 2 5704 5791 84938454 84938543 4.680000e-28 137.0
11 TraesCS6A01G237400 chr6D 94.444 90 4 1 5703 5791 84938547 84938458 4.680000e-28 137.0
12 TraesCS6A01G237400 chr6D 94.118 85 5 0 8764 8848 310126163 310126079 7.830000e-26 130.0
13 TraesCS6A01G237400 chr6B 93.827 3013 113 18 5790 8763 477833405 477830427 0.000000e+00 4466.0
14 TraesCS6A01G237400 chr6B 95.808 2648 91 6 1868 4499 477837006 477834363 0.000000e+00 4257.0
15 TraesCS6A01G237400 chr6B 95.455 1100 32 8 779 1871 477838175 477837087 0.000000e+00 1738.0
16 TraesCS6A01G237400 chr6B 94.941 593 24 6 5119 5708 477833993 477833404 0.000000e+00 924.0
17 TraesCS6A01G237400 chr6B 86.751 551 68 5 1 550 477862844 477862298 8.250000e-170 608.0
18 TraesCS6A01G237400 chr6B 89.059 457 34 7 9159 9607 477827964 477827516 3.920000e-153 553.0
19 TraesCS6A01G237400 chr6B 94.413 179 9 1 4943 5121 477834251 477834074 3.420000e-69 274.0
20 TraesCS6A01G237400 chr6B 88.000 200 10 4 8892 9085 477830241 477830050 3.490000e-54 224.0
21 TraesCS6A01G237400 chr6B 92.913 127 5 2 4572 4697 477834388 477834265 2.130000e-41 182.0
22 TraesCS6A01G237400 chr6B 95.062 81 4 0 8768 8848 477830330 477830250 2.820000e-25 128.0
23 TraesCS6A01G237400 chr4B 91.224 2108 168 5 2374 4467 122214530 122216634 0.000000e+00 2852.0
24 TraesCS6A01G237400 chr4B 87.986 2214 220 15 5810 7983 122218328 122220535 0.000000e+00 2573.0
25 TraesCS6A01G237400 chr4B 87.879 957 94 7 929 1871 122212895 122213843 0.000000e+00 1105.0
26 TraesCS6A01G237400 chr4B 84.442 842 104 18 7920 8750 122220562 122221387 0.000000e+00 804.0
27 TraesCS6A01G237400 chr4B 88.889 486 37 9 5184 5656 122217213 122217694 5.000000e-162 582.0
28 TraesCS6A01G237400 chr4B 83.208 530 69 15 4575 5098 122216661 122217176 1.460000e-127 468.0
29 TraesCS6A01G237400 chr4B 83.137 510 57 16 1881 2375 122213942 122214437 1.150000e-118 438.0
30 TraesCS6A01G237400 chr4B 80.749 374 42 16 9141 9496 122221865 122222226 2.060000e-66 265.0
31 TraesCS6A01G237400 chr4B 89.655 87 8 1 5706 5791 17256188 17256102 1.020000e-19 110.0
32 TraesCS6A01G237400 chr4B 97.297 37 0 1 5035 5071 122217180 122217215 2.900000e-05 62.1
33 TraesCS6A01G237400 chr4A 90.797 2108 177 5 2374 4467 498694915 498697019 0.000000e+00 2802.0
34 TraesCS6A01G237400 chr4A 87.890 2213 223 14 5810 7983 498698798 498701004 0.000000e+00 2560.0
35 TraesCS6A01G237400 chr4A 87.683 958 94 10 929 1871 498693078 498694026 0.000000e+00 1094.0
36 TraesCS6A01G237400 chr4A 85.018 841 90 25 7921 8750 498701122 498701937 0.000000e+00 822.0
37 TraesCS6A01G237400 chr4A 90.316 475 37 6 5184 5655 498697683 498698151 1.770000e-171 614.0
38 TraesCS6A01G237400 chr4A 79.839 372 45 19 9141 9496 498702425 498702782 2.680000e-60 244.0
39 TraesCS6A01G237400 chr4A 87.075 147 14 3 1881 2022 498694126 498694272 2.780000e-35 161.0
40 TraesCS6A01G237400 chr4A 95.876 97 2 2 4480 4575 91125094 91125189 1.290000e-33 156.0
41 TraesCS6A01G237400 chr4A 93.204 103 5 2 4475 4575 588567366 588567468 6.010000e-32 150.0
42 TraesCS6A01G237400 chr4A 90.909 88 7 1 5707 5793 164523076 164523163 6.100000e-22 117.0
43 TraesCS6A01G237400 chr4A 80.597 134 19 2 2242 2375 498694667 498694793 7.940000e-16 97.1
44 TraesCS6A01G237400 chr4A 100.000 30 0 0 5042 5071 498697656 498697685 1.000000e-03 56.5
45 TraesCS6A01G237400 chr4D 90.763 2111 175 6 2374 4467 85003581 85005688 0.000000e+00 2800.0
46 TraesCS6A01G237400 chr4D 88.653 2212 207 13 5810 7983 85007816 85010021 0.000000e+00 2654.0
47 TraesCS6A01G237400 chr4D 87.983 957 92 12 929 1871 85001950 85002897 0.000000e+00 1109.0
48 TraesCS6A01G237400 chr4D 82.198 837 108 26 7920 8750 85010138 85010939 0.000000e+00 682.0
49 TraesCS6A01G237400 chr4D 88.075 478 41 8 5184 5649 85006248 85006721 3.920000e-153 553.0
50 TraesCS6A01G237400 chr4D 82.031 512 65 19 1881 2375 85002998 85003499 2.500000e-110 411.0
51 TraesCS6A01G237400 chr4D 81.015 532 63 16 4572 5098 85005713 85006211 1.170000e-103 388.0
52 TraesCS6A01G237400 chr4D 79.675 369 45 17 9141 9496 85011425 85011776 1.250000e-58 239.0
53 TraesCS6A01G237400 chrUn 77.399 323 52 12 3487 3791 93237613 93237932 1.280000e-38 172.0
54 TraesCS6A01G237400 chr3B 92.661 109 4 3 4469 4575 428432023 428432129 4.650000e-33 154.0
55 TraesCS6A01G237400 chr3B 94.898 98 3 2 4478 4575 556054052 556054147 1.670000e-32 152.0
56 TraesCS6A01G237400 chr1B 94.118 102 5 1 4474 4575 155524952 155525052 4.650000e-33 154.0
57 TraesCS6A01G237400 chr7B 93.333 105 3 3 4475 4575 35086896 35087000 1.670000e-32 152.0
58 TraesCS6A01G237400 chr7B 82.192 146 19 7 3732 3874 423066431 423066572 1.700000e-22 119.0
59 TraesCS6A01G237400 chr7B 90.909 88 7 1 5707 5793 521143306 521143219 6.100000e-22 117.0
60 TraesCS6A01G237400 chr2D 94.845 97 5 0 4479 4575 294542225 294542321 1.670000e-32 152.0
61 TraesCS6A01G237400 chr3D 94.059 101 2 3 4475 4575 460636209 460636305 6.010000e-32 150.0
62 TraesCS6A01G237400 chr1D 92.045 88 4 2 5707 5791 41825984 41825897 4.710000e-23 121.0
63 TraesCS6A01G237400 chr5D 90.909 88 6 2 5707 5792 518875163 518875250 6.100000e-22 117.0
64 TraesCS6A01G237400 chr3A 89.655 87 8 1 5707 5792 470705342 470705428 1.020000e-19 110.0
65 TraesCS6A01G237400 chr7D 80.822 146 21 7 3732 3874 408568041 408568182 3.670000e-19 108.0
66 TraesCS6A01G237400 chr7A 87.097 93 10 2 5700 5791 408058747 408058838 4.750000e-18 104.0
67 TraesCS6A01G237400 chr2B 96.226 53 2 0 9425 9477 456024111 456024163 4.780000e-13 87.9
68 TraesCS6A01G237400 chr2A 96.226 53 2 0 9425 9477 520308222 520308274 4.780000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G237400 chr6A 446755523 446765131 9608 True 17745.000000 17745 100.000000 1 9609 1 chr6A.!!$R2 9608
1 TraesCS6A01G237400 chr6D 310125338 310134944 9606 True 1506.111111 4634 91.691000 1 9609 9 chr6D.!!$R2 9608
2 TraesCS6A01G237400 chr6B 477827516 477838175 10659 True 1416.222222 4466 93.275333 779 9607 9 chr6B.!!$R2 8828
3 TraesCS6A01G237400 chr6B 477862298 477862844 546 True 608.000000 608 86.751000 1 550 1 chr6B.!!$R1 549
4 TraesCS6A01G237400 chr4B 122212895 122222226 9331 False 1016.566667 2852 87.201222 929 9496 9 chr4B.!!$F1 8567
5 TraesCS6A01G237400 chr4A 498693078 498702782 9704 False 938.955556 2802 87.690556 929 9496 9 chr4A.!!$F4 8567
6 TraesCS6A01G237400 chr4D 85001950 85011776 9826 False 1104.500000 2800 85.049125 929 9496 8 chr4D.!!$F1 8567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 602 0.512952 AGTTCATTCGTGCGTGCTTC 59.487 50.000 0.00 0.00 0.00 3.86 F
730 751 1.529826 CGCGTTTTTGCAGGATCTAGC 60.530 52.381 0.00 0.00 34.15 3.42 F
2215 2575 0.107263 TCTTGCCACTGTTCTGCACA 60.107 50.000 0.00 0.00 34.16 4.57 F
2216 2576 0.740149 CTTGCCACTGTTCTGCACAA 59.260 50.000 0.00 0.00 33.87 3.33 F
2217 2577 0.740149 TTGCCACTGTTCTGCACAAG 59.260 50.000 0.00 0.00 33.87 3.16 F
2902 3620 1.070914 GCACTATACCCTCTCAAGCCC 59.929 57.143 0.00 0.00 0.00 5.19 F
4544 5279 0.338467 TTGGGGTAGGCTAGAGCTGA 59.662 55.000 0.00 0.00 41.70 4.26 F
5451 6388 1.087501 GGATGTTGAAGACCCTTCGC 58.912 55.000 0.00 0.00 0.00 4.70 F
5846 7745 1.539388 TGCAGAAATAAGCAACCGGTG 59.461 47.619 8.52 3.35 37.90 4.94 F
7212 9133 1.140312 AGCCTTGTGGAGTTCCTCAA 58.860 50.000 13.31 13.31 44.40 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2199 2559 0.394216 ACTTGTGCAGAACAGTGGCA 60.394 50.000 0.00 0.00 40.74 4.92 R
2617 3335 2.420687 GGGACACTCATTAAGCTCCCAG 60.421 54.545 0.00 0.00 41.89 4.45 R
3894 4612 1.005215 CAAGGCCATCTGAACCTCCTT 59.995 52.381 5.01 0.00 34.54 3.36 R
4175 4893 4.922206 ACAAGGATCTTTTGGCTGATACA 58.078 39.130 12.81 0.00 0.00 2.29 R
4242 4960 7.200778 TCAACAAATGTCATCTTCATCGAAA 57.799 32.000 0.00 0.00 0.00 3.46 R
4873 5612 0.179202 TGTTCATACAACGCATGCGC 60.179 50.000 38.15 19.48 44.19 6.09 R
6145 8063 0.519077 GCAGTTGAGTAGTTGCTGGC 59.481 55.000 0.00 0.00 33.88 4.85 R
7024 8945 1.153289 CTCATCTGCCGACTTGGGG 60.153 63.158 0.00 0.00 38.63 4.96 R
7504 9431 1.345741 TCAGAGCACCTCCTGAACTTG 59.654 52.381 0.00 0.00 0.00 3.16 R
9004 11504 0.108207 ACATATCTGCAGAGGCTGGC 59.892 55.000 22.96 0.00 41.91 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.183228 GTTCGGATGAGGAATGGAAACTAA 58.817 41.667 0.00 0.00 0.00 2.24
141 142 2.218759 CAGCTATGCATACGACCGTTTC 59.781 50.000 1.16 0.00 0.00 2.78
205 206 4.261801 ACAGATCCCGTAAAAATGGTCAG 58.738 43.478 0.00 0.00 0.00 3.51
327 330 3.181467 TGGAGGTTTCGAGGTCGTTTTTA 60.181 43.478 0.00 0.00 40.80 1.52
331 334 3.809279 GGTTTCGAGGTCGTTTTTAAGGA 59.191 43.478 0.00 0.00 40.80 3.36
353 356 0.601841 CCCGTAAACTGGTCAACGCT 60.602 55.000 0.00 0.00 34.13 5.07
356 359 0.872388 GTAAACTGGTCAACGCTGGG 59.128 55.000 0.00 0.00 0.00 4.45
408 411 0.969409 GGAAGAGCTTGGCAATGGCT 60.969 55.000 13.14 13.14 40.87 4.75
412 415 1.493871 AGAGCTTGGCAATGGCTATCT 59.506 47.619 13.24 0.82 40.87 1.98
443 463 4.790962 AGCATGCGACCTGCCAGG 62.791 66.667 9.83 9.83 45.60 4.45
544 564 3.840468 CCAGTAACTGCATACGTGTGTA 58.160 45.455 14.10 8.57 34.45 2.90
574 594 1.649171 CGGAGTTCGAGTTCATTCGTG 59.351 52.381 0.00 0.00 42.43 4.35
580 600 1.617755 CGAGTTCATTCGTGCGTGCT 61.618 55.000 0.00 0.00 35.91 4.40
582 602 0.512952 AGTTCATTCGTGCGTGCTTC 59.487 50.000 0.00 0.00 0.00 3.86
602 622 2.589798 ACGTGGAAGAAGAAACGTGA 57.410 45.000 0.00 0.00 46.58 4.35
616 636 4.816925 AGAAACGTGAGGAGAAAAAGAAGG 59.183 41.667 0.00 0.00 0.00 3.46
650 670 8.593492 TTTACCTAGTTTACGAGGTCTTTTTC 57.407 34.615 16.48 0.00 46.93 2.29
653 673 3.725490 AGTTTACGAGGTCTTTTTCGCT 58.275 40.909 0.00 0.00 40.32 4.93
692 712 3.669557 CGCAAATTCGTTTTAGGGACCTG 60.670 47.826 0.00 0.00 0.00 4.00
699 719 5.587388 TCGTTTTAGGGACCTGTATACTG 57.413 43.478 4.17 3.48 0.00 2.74
704 724 7.818930 CGTTTTAGGGACCTGTATACTGTTTTA 59.181 37.037 4.17 0.00 0.00 1.52
705 725 8.939929 GTTTTAGGGACCTGTATACTGTTTTAC 58.060 37.037 4.17 0.00 0.00 2.01
706 726 5.688814 AGGGACCTGTATACTGTTTTACC 57.311 43.478 4.17 1.10 0.00 2.85
728 749 1.730064 GACGCGTTTTTGCAGGATCTA 59.270 47.619 15.53 0.00 34.15 1.98
729 750 1.732259 ACGCGTTTTTGCAGGATCTAG 59.268 47.619 5.58 0.00 34.15 2.43
730 751 1.529826 CGCGTTTTTGCAGGATCTAGC 60.530 52.381 0.00 0.00 34.15 3.42
764 786 9.588774 TCTAACGACTTTAATTTGTGATTTTCG 57.411 29.630 0.00 0.00 0.00 3.46
838 861 2.396590 TTAGACCATTTCCCTCACGC 57.603 50.000 0.00 0.00 0.00 5.34
895 1125 2.743928 CAAGGCCAGAGCACGGTC 60.744 66.667 5.01 0.00 42.56 4.79
896 1126 4.379243 AAGGCCAGAGCACGGTCG 62.379 66.667 5.01 0.00 42.56 4.79
1081 1318 3.307108 GAGCCCTAGCCCTAGCGG 61.307 72.222 0.00 2.11 46.67 5.52
1143 1380 2.667199 CCGCGTTTCCCGTTTCCT 60.667 61.111 4.92 0.00 39.32 3.36
1227 1464 2.047844 CCCATATCCTCCGCGCTG 60.048 66.667 5.56 0.00 0.00 5.18
1339 1576 1.662309 CGCGTTCTCTACTCGTGTTGT 60.662 52.381 0.00 0.00 30.60 3.32
1649 1894 5.429681 TTGAAGGGATTGGACGAGATTAA 57.570 39.130 0.00 0.00 0.00 1.40
1729 1974 5.487488 ACCTCCACTGATACAAAGGTGATTA 59.513 40.000 0.00 0.00 35.84 1.75
1949 2293 7.015487 TCCTTTCATGTTCCAGATGTGAAAATT 59.985 33.333 0.00 0.00 38.05 1.82
1995 2344 7.231317 TCTCATCAAAATTTCCAGCAGTTAGTT 59.769 33.333 0.00 0.00 0.00 2.24
2062 2411 8.757982 ATAAGAGGCAGATCAAAATATTGTGT 57.242 30.769 5.52 0.00 37.79 3.72
2212 2572 1.527034 TCATCTTGCCACTGTTCTGC 58.473 50.000 0.00 0.00 0.00 4.26
2213 2573 1.202794 TCATCTTGCCACTGTTCTGCA 60.203 47.619 0.00 0.00 0.00 4.41
2214 2574 1.068748 CATCTTGCCACTGTTCTGCAC 60.069 52.381 0.00 0.00 34.16 4.57
2215 2575 0.107263 TCTTGCCACTGTTCTGCACA 60.107 50.000 0.00 0.00 34.16 4.57
2216 2576 0.740149 CTTGCCACTGTTCTGCACAA 59.260 50.000 0.00 0.00 33.87 3.33
2217 2577 0.740149 TTGCCACTGTTCTGCACAAG 59.260 50.000 0.00 0.00 33.87 3.16
2233 2819 9.692749 TTCTGCACAAGTACTATATATAGCAAC 57.307 33.333 18.00 15.76 33.68 4.17
2295 2882 3.573967 CAGTTAAGGTTGCTTTCACCCAT 59.426 43.478 0.00 0.00 0.00 4.00
2464 3182 7.128234 TGAGATGACATTGAGATATCCAACA 57.872 36.000 0.00 0.00 0.00 3.33
2503 3221 9.109393 TCAATTTATCAAGTAGAGAAAATCCCG 57.891 33.333 0.00 0.00 40.48 5.14
2521 3239 3.072915 TCCCGGTGAAGCATAATGATGAT 59.927 43.478 0.00 0.00 34.73 2.45
2559 3277 6.591834 TCTGCAAGAAATAGTAACTTCTCAGC 59.408 38.462 11.72 11.72 42.31 4.26
2617 3335 2.772515 ACTGGAGGTTAGTAGGCATTCC 59.227 50.000 0.00 0.00 0.00 3.01
2811 3529 6.457528 GCAGACTATCAAGCAGATAAACCAAC 60.458 42.308 1.32 0.00 38.69 3.77
2885 3603 6.425114 TGTTCTACTTGAGAGAAATTCAGCAC 59.575 38.462 0.00 0.00 34.78 4.40
2902 3620 1.070914 GCACTATACCCTCTCAAGCCC 59.929 57.143 0.00 0.00 0.00 5.19
2929 3647 2.952310 GACCTTTTCAGACTTGCCTTGT 59.048 45.455 0.00 0.00 0.00 3.16
3261 3979 3.364549 TGGACTGGCATCTTTTATTGGG 58.635 45.455 0.00 0.00 0.00 4.12
3329 4047 2.229062 GAGGAGGTAAAAAGTTGCCAGC 59.771 50.000 0.00 0.00 41.73 4.85
3483 4201 1.139654 TCATGATCCACCTGCTGTAGC 59.860 52.381 0.00 0.00 42.50 3.58
3539 4257 1.126948 TGGAGGCCACAGTCACATGA 61.127 55.000 5.01 0.00 0.00 3.07
3654 4372 4.799564 AGAGAGGAACTAGTGCTCAAAG 57.200 45.455 0.00 0.00 46.80 2.77
3894 4612 5.247110 AGAAGCTTCTTGGACTGATAACTGA 59.753 40.000 23.49 0.00 32.55 3.41
4057 4775 7.330262 TGATTGGAAGCTTTGAAAATATTCCC 58.670 34.615 0.00 0.00 34.21 3.97
4242 4960 4.943093 GCTGCCATTGGGTCAAAAATTAAT 59.057 37.500 4.53 0.00 36.17 1.40
4270 4988 5.618056 TGAAGATGACATTTGTTGAGCTC 57.382 39.130 6.82 6.82 0.00 4.09
4273 4991 2.254546 TGACATTTGTTGAGCTCGGT 57.745 45.000 9.64 0.00 0.00 4.69
4297 5015 1.741706 CACCCTGCTGCATCTTACTTG 59.258 52.381 1.31 0.00 0.00 3.16
4326 5056 0.400213 CCTACAACTTGGGTGCTGGA 59.600 55.000 0.00 0.00 0.00 3.86
4372 5102 7.648112 TGCGTTCTGCTAGATAATAAGTAAGTG 59.352 37.037 0.00 0.00 46.63 3.16
4375 5105 9.482627 GTTCTGCTAGATAATAAGTAAGTGCAT 57.517 33.333 0.00 0.00 0.00 3.96
4498 5233 6.732531 TGAAACAATTTCATGCAACAACAA 57.267 29.167 0.00 0.00 44.21 2.83
4499 5234 6.541086 TGAAACAATTTCATGCAACAACAAC 58.459 32.000 0.00 0.00 44.21 3.32
4500 5235 6.148315 TGAAACAATTTCATGCAACAACAACA 59.852 30.769 0.00 0.00 44.21 3.33
4501 5236 6.492007 AACAATTTCATGCAACAACAACAA 57.508 29.167 0.00 0.00 0.00 2.83
4502 5237 5.867166 ACAATTTCATGCAACAACAACAAC 58.133 33.333 0.00 0.00 0.00 3.32
4503 5238 5.410746 ACAATTTCATGCAACAACAACAACA 59.589 32.000 0.00 0.00 0.00 3.33
4504 5239 6.072838 ACAATTTCATGCAACAACAACAACAA 60.073 30.769 0.00 0.00 0.00 2.83
4505 5240 5.929697 TTTCATGCAACAACAACAACAAA 57.070 30.435 0.00 0.00 0.00 2.83
4506 5241 5.527511 TTCATGCAACAACAACAACAAAG 57.472 34.783 0.00 0.00 0.00 2.77
4507 5242 3.370366 TCATGCAACAACAACAACAAAGC 59.630 39.130 0.00 0.00 0.00 3.51
4508 5243 2.072298 TGCAACAACAACAACAAAGCC 58.928 42.857 0.00 0.00 0.00 4.35
4509 5244 2.289320 TGCAACAACAACAACAAAGCCT 60.289 40.909 0.00 0.00 0.00 4.58
4510 5245 2.741517 GCAACAACAACAACAAAGCCTT 59.258 40.909 0.00 0.00 0.00 4.35
4511 5246 3.188254 GCAACAACAACAACAAAGCCTTT 59.812 39.130 0.00 0.00 0.00 3.11
4512 5247 4.390297 GCAACAACAACAACAAAGCCTTTA 59.610 37.500 0.00 0.00 0.00 1.85
4513 5248 5.445806 GCAACAACAACAACAAAGCCTTTAG 60.446 40.000 0.00 0.00 0.00 1.85
4514 5249 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
4515 5250 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
4516 5251 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
4517 5252 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
4518 5253 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
4519 5254 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
4520 5255 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
4521 5256 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
4522 5257 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
4523 5258 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
4524 5259 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
4525 5260 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
4526 5261 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
4527 5262 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
4536 5271 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
4537 5272 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
4538 5273 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
4539 5274 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
4540 5275 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
4541 5276 1.134371 CAAGTTGGGGTAGGCTAGAGC 60.134 57.143 0.00 0.00 41.14 4.09
4542 5277 0.340208 AGTTGGGGTAGGCTAGAGCT 59.660 55.000 0.00 0.00 41.70 4.09
4543 5278 0.466124 GTTGGGGTAGGCTAGAGCTG 59.534 60.000 0.00 0.00 41.70 4.24
4544 5279 0.338467 TTGGGGTAGGCTAGAGCTGA 59.662 55.000 0.00 0.00 41.70 4.26
4545 5280 0.338467 TGGGGTAGGCTAGAGCTGAA 59.662 55.000 0.00 0.00 41.70 3.02
4546 5281 1.273609 TGGGGTAGGCTAGAGCTGAAA 60.274 52.381 0.00 0.00 41.70 2.69
4547 5282 1.139256 GGGGTAGGCTAGAGCTGAAAC 59.861 57.143 0.00 0.00 41.70 2.78
4548 5283 1.139256 GGGTAGGCTAGAGCTGAAACC 59.861 57.143 0.00 4.43 41.70 3.27
4549 5284 1.139256 GGTAGGCTAGAGCTGAAACCC 59.861 57.143 0.00 0.00 41.70 4.11
4550 5285 1.831736 GTAGGCTAGAGCTGAAACCCA 59.168 52.381 0.00 0.00 41.70 4.51
4551 5286 1.589414 AGGCTAGAGCTGAAACCCAT 58.411 50.000 0.00 0.00 41.70 4.00
4552 5287 2.764269 AGGCTAGAGCTGAAACCCATA 58.236 47.619 0.00 0.00 41.70 2.74
4553 5288 3.115390 AGGCTAGAGCTGAAACCCATAA 58.885 45.455 0.00 0.00 41.70 1.90
4554 5289 3.135530 AGGCTAGAGCTGAAACCCATAAG 59.864 47.826 0.00 0.00 41.70 1.73
4555 5290 3.134804 GGCTAGAGCTGAAACCCATAAGA 59.865 47.826 0.00 0.00 41.70 2.10
4556 5291 4.202409 GGCTAGAGCTGAAACCCATAAGAT 60.202 45.833 0.00 0.00 41.70 2.40
4557 5292 4.994217 GCTAGAGCTGAAACCCATAAGATC 59.006 45.833 0.00 0.00 38.21 2.75
4558 5293 5.221621 GCTAGAGCTGAAACCCATAAGATCT 60.222 44.000 0.00 0.00 38.78 2.75
4559 5294 5.289083 AGAGCTGAAACCCATAAGATCTC 57.711 43.478 0.00 0.00 29.78 2.75
4560 5295 4.054671 GAGCTGAAACCCATAAGATCTCG 58.945 47.826 0.00 0.00 0.00 4.04
4561 5296 2.545946 GCTGAAACCCATAAGATCTCGC 59.454 50.000 0.00 0.00 0.00 5.03
4562 5297 3.797039 CTGAAACCCATAAGATCTCGCA 58.203 45.455 0.00 0.00 0.00 5.10
4563 5298 4.191544 CTGAAACCCATAAGATCTCGCAA 58.808 43.478 0.00 0.00 0.00 4.85
4564 5299 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
4565 5300 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
4566 5301 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
4567 5302 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
4568 5303 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
4569 5304 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
4570 5305 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
4607 5343 3.243704 TGCAAGCACTACCAAAATGTTCC 60.244 43.478 0.00 0.00 0.00 3.62
4610 5346 5.540911 CAAGCACTACCAAAATGTTCCATT 58.459 37.500 0.00 0.00 0.00 3.16
4640 5376 6.054860 AGCATACAGAATGAGTAAACCACT 57.945 37.500 0.00 0.00 39.69 4.00
4718 5455 5.655893 AATTGCAATCCACTTGTTTTTCG 57.344 34.783 13.38 0.00 37.18 3.46
4726 5463 2.538132 CCACTTGTTTTTCGTGTCGGAC 60.538 50.000 0.00 0.00 0.00 4.79
4731 5468 1.672363 GTTTTTCGTGTCGGACCCTTT 59.328 47.619 5.55 0.00 0.00 3.11
4732 5469 2.041251 TTTTCGTGTCGGACCCTTTT 57.959 45.000 5.55 0.00 0.00 2.27
4740 5478 4.023878 CGTGTCGGACCCTTTTAAAAATCA 60.024 41.667 5.55 0.00 0.00 2.57
4747 5485 7.988028 TCGGACCCTTTTAAAAATCAAAATGTT 59.012 29.630 1.66 0.00 0.00 2.71
4748 5486 8.067189 CGGACCCTTTTAAAAATCAAAATGTTG 58.933 33.333 1.66 0.00 35.95 3.33
4774 5512 8.472007 AAACCAGTTATTCACAAGAAACCATA 57.528 30.769 0.00 0.00 37.29 2.74
4805 5543 5.705441 TGGTTATAGTTTTGAACAGGCTGAG 59.295 40.000 23.66 0.00 0.00 3.35
4807 5545 6.348540 GGTTATAGTTTTGAACAGGCTGAGTG 60.349 42.308 23.66 0.00 0.00 3.51
4811 5549 2.057137 TTGAACAGGCTGAGTGCTTT 57.943 45.000 23.66 3.07 42.39 3.51
4840 5578 3.644966 TGAACTTCACTGGAACCAAGT 57.355 42.857 0.00 0.00 0.00 3.16
4844 5582 5.104693 TGAACTTCACTGGAACCAAGTCTAA 60.105 40.000 0.00 0.00 0.00 2.10
4856 5594 8.314751 TGGAACCAAGTCTAAATTTGTTTTCAA 58.685 29.630 0.00 0.00 38.10 2.69
4870 5609 6.890663 TTGTTTTCAATCTTGTGAGCAAAG 57.109 33.333 0.00 0.00 34.60 2.77
4873 5612 4.472691 TTCAATCTTGTGAGCAAAGACG 57.527 40.909 0.00 0.00 33.73 4.18
4874 5613 2.224079 TCAATCTTGTGAGCAAAGACGC 59.776 45.455 0.00 0.00 33.73 5.19
4876 5615 1.439365 CTTGTGAGCAAAGACGCGC 60.439 57.895 5.73 0.00 36.85 6.86
4891 5630 2.554656 GCGCATGCGTTGTATGAAC 58.445 52.632 37.54 16.52 42.09 3.18
4909 5648 4.609947 TGAACAGTTCATGCATGTTTGTC 58.390 39.130 25.43 18.46 37.29 3.18
4911 5650 3.968649 ACAGTTCATGCATGTTTGTCAC 58.031 40.909 25.43 13.30 0.00 3.67
4915 5654 3.646611 TCATGCATGTTTGTCACTTGG 57.353 42.857 25.43 0.00 32.26 3.61
4998 5739 6.364568 AAGGATTTGGATTTTTCAGAAGGG 57.635 37.500 0.00 0.00 0.00 3.95
4999 5740 4.223700 AGGATTTGGATTTTTCAGAAGGGC 59.776 41.667 0.00 0.00 0.00 5.19
5162 6074 3.316029 CAGGACATGCACAAGAGACAAAA 59.684 43.478 0.00 0.00 0.00 2.44
5223 6137 9.343539 AGTTCATTTTATTTCTAGGTAGATGCC 57.656 33.333 0.00 0.00 31.40 4.40
5345 6282 5.702670 CGAGTTTGGCATCATACTGGAATAT 59.297 40.000 0.00 0.00 35.76 1.28
5451 6388 1.087501 GGATGTTGAAGACCCTTCGC 58.912 55.000 0.00 0.00 0.00 4.70
5493 6430 3.072476 CCCTACAGACCAGGAGTTGAAAA 59.928 47.826 0.00 0.00 34.91 2.29
5538 6475 6.699575 ACTTCTTCACACTTGCATTAGTTT 57.300 33.333 0.00 0.00 0.00 2.66
5617 6555 2.828520 TGTTGGTCAAGCTGTTTGGAAA 59.171 40.909 4.39 0.00 37.39 3.13
5716 6725 3.536956 TGCAAACTATTACTCCCTCCG 57.463 47.619 0.00 0.00 0.00 4.63
5725 6734 4.586306 ATTACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
5727 6736 3.345508 ACTCCCTCCGTTCCAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
5731 6742 3.073356 TCCCTCCGTTCCAAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
5732 6743 3.439129 CCCTCCGTTCCAAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
5735 6746 3.495377 TCCGTTCCAAAATACTTGTCGTG 59.505 43.478 0.00 0.00 0.00 4.35
5736 6747 3.364565 CCGTTCCAAAATACTTGTCGTGG 60.365 47.826 0.00 0.00 0.00 4.94
5738 6749 4.153475 CGTTCCAAAATACTTGTCGTGGAT 59.847 41.667 0.00 0.00 35.19 3.41
5739 6750 5.334569 CGTTCCAAAATACTTGTCGTGGATT 60.335 40.000 0.00 0.00 35.19 3.01
5740 6751 6.443792 GTTCCAAAATACTTGTCGTGGATTT 58.556 36.000 0.00 0.00 35.19 2.17
5741 6752 7.571613 CGTTCCAAAATACTTGTCGTGGATTTA 60.572 37.037 0.00 0.00 35.19 1.40
5742 6753 7.372451 TCCAAAATACTTGTCGTGGATTTAG 57.628 36.000 0.00 0.00 30.27 1.85
5744 6755 7.446013 TCCAAAATACTTGTCGTGGATTTAGTT 59.554 33.333 0.00 0.00 30.27 2.24
5745 6756 7.749126 CCAAAATACTTGTCGTGGATTTAGTTC 59.251 37.037 0.00 0.00 0.00 3.01
5746 6757 7.972832 AAATACTTGTCGTGGATTTAGTTCA 57.027 32.000 0.00 0.00 0.00 3.18
5747 6758 7.972832 AATACTTGTCGTGGATTTAGTTCAA 57.027 32.000 0.00 0.00 0.00 2.69
5748 6759 7.972832 ATACTTGTCGTGGATTTAGTTCAAA 57.027 32.000 0.00 0.00 0.00 2.69
5749 6760 6.877611 ACTTGTCGTGGATTTAGTTCAAAT 57.122 33.333 0.00 0.00 39.63 2.32
5750 6761 7.272037 ACTTGTCGTGGATTTAGTTCAAATT 57.728 32.000 0.00 0.00 36.96 1.82
5751 6762 7.712797 ACTTGTCGTGGATTTAGTTCAAATTT 58.287 30.769 0.00 0.00 36.96 1.82
5752 6763 7.647715 ACTTGTCGTGGATTTAGTTCAAATTTG 59.352 33.333 12.15 12.15 36.96 2.32
5753 6764 7.265647 TGTCGTGGATTTAGTTCAAATTTGA 57.734 32.000 16.91 16.91 36.96 2.69
5754 6765 7.708051 TGTCGTGGATTTAGTTCAAATTTGAA 58.292 30.769 26.01 26.01 44.31 2.69
5766 6777 6.928979 TTCAAATTTGAACTCTAACCACGA 57.071 33.333 26.01 3.20 41.88 4.35
5767 6778 6.295039 TCAAATTTGAACTCTAACCACGAC 57.705 37.500 18.45 0.00 33.55 4.34
5768 6779 5.818336 TCAAATTTGAACTCTAACCACGACA 59.182 36.000 18.45 0.00 33.55 4.35
5769 6780 6.316640 TCAAATTTGAACTCTAACCACGACAA 59.683 34.615 18.45 0.00 33.55 3.18
5770 6781 5.924475 ATTTGAACTCTAACCACGACAAG 57.076 39.130 0.00 0.00 0.00 3.16
5771 6782 4.395959 TTGAACTCTAACCACGACAAGT 57.604 40.909 0.00 0.00 0.00 3.16
5774 6785 6.092955 TGAACTCTAACCACGACAAGTATT 57.907 37.500 0.00 0.00 0.00 1.89
5775 6786 6.518493 TGAACTCTAACCACGACAAGTATTT 58.482 36.000 0.00 0.00 0.00 1.40
5778 6789 5.699458 ACTCTAACCACGACAAGTATTTTGG 59.301 40.000 0.00 0.00 0.00 3.28
5779 6790 5.856156 TCTAACCACGACAAGTATTTTGGA 58.144 37.500 0.00 0.00 0.00 3.53
5780 6791 4.823790 AACCACGACAAGTATTTTGGAC 57.176 40.909 0.00 0.00 0.00 4.02
5781 6792 2.803956 ACCACGACAAGTATTTTGGACG 59.196 45.455 0.00 0.00 0.00 4.79
5785 6796 2.671396 CGACAAGTATTTTGGACGGAGG 59.329 50.000 0.00 0.00 0.00 4.30
5787 6798 2.640826 ACAAGTATTTTGGACGGAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
5788 6799 3.270877 CAAGTATTTTGGACGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
5846 7745 1.539388 TGCAGAAATAAGCAACCGGTG 59.461 47.619 8.52 3.35 37.90 4.94
6095 8013 4.592942 TCTGCATGCACTTAAGAAGGATT 58.407 39.130 18.46 0.00 0.00 3.01
6145 8063 8.419435 CGTATTGTTGATTCATTGAACTTTGTG 58.581 33.333 0.15 0.00 0.00 3.33
6259 8177 6.299141 ACTGCTCAGACTAGAAAATTTGGAA 58.701 36.000 3.60 0.00 0.00 3.53
6365 8283 4.133820 TCTCCATTCACGACATTTTGTGT 58.866 39.130 0.00 0.00 45.83 3.72
6453 8374 3.710209 ATCTGCTACTGACTTGCCTTT 57.290 42.857 0.00 0.00 0.00 3.11
6454 8375 2.771089 TCTGCTACTGACTTGCCTTTG 58.229 47.619 0.00 0.00 0.00 2.77
6481 8402 2.226962 AAGTTGGCAGCATCATTCCT 57.773 45.000 3.63 0.00 0.00 3.36
6624 8545 4.021104 TGTGGAACGAGATGTTGATCTTCT 60.021 41.667 0.00 0.00 42.09 2.85
6625 8546 4.328440 GTGGAACGAGATGTTGATCTTCTG 59.672 45.833 0.00 0.00 42.09 3.02
6712 8633 3.202097 TGAATTCACAGCGTCAACAGAA 58.798 40.909 3.38 0.00 0.00 3.02
6713 8634 3.248363 TGAATTCACAGCGTCAACAGAAG 59.752 43.478 3.38 0.00 0.00 2.85
6748 8669 7.624360 AACAAATTTTATAGAGACCATCGCA 57.376 32.000 0.00 0.00 0.00 5.10
6844 8765 8.518702 AGATTTTTGCTTTTTCCTGATAGAGTC 58.481 33.333 0.00 0.00 0.00 3.36
6855 8776 7.862274 TTCCTGATAGAGTCATCATGGTATT 57.138 36.000 0.00 0.00 35.97 1.89
6929 8850 6.318900 ACTTTTGTAGGTCTTTGAAGGTGAAG 59.681 38.462 0.00 0.00 0.00 3.02
7024 8945 1.929836 CAGCTATTCTTCTCACGCACC 59.070 52.381 0.00 0.00 0.00 5.01
7151 9072 6.985117 TCATTTCTCACAAAATTCCCTTCAG 58.015 36.000 0.00 0.00 0.00 3.02
7212 9133 1.140312 AGCCTTGTGGAGTTCCTCAA 58.860 50.000 13.31 13.31 44.40 3.02
7336 9257 7.203910 GTGAATCTAAGTCTGTAATGACCGAT 58.796 38.462 0.00 0.00 37.66 4.18
7504 9431 5.239525 GGAACATAATGTATTCTCACAGCCC 59.760 44.000 0.00 0.00 0.00 5.19
7522 9449 0.689623 CCAAGTTCAGGAGGTGCTCT 59.310 55.000 0.00 0.00 0.00 4.09
7567 9494 5.073144 TCAGTTCCCAGAGGTCTTTATGTTT 59.927 40.000 0.00 0.00 0.00 2.83
7607 9534 1.002544 GAGGTGAAGGGGTCTCTTGTG 59.997 57.143 0.00 0.00 0.00 3.33
7626 9553 3.119602 TGTGTACCAAGAGAGCACGATAC 60.120 47.826 0.00 0.00 33.23 2.24
7736 9669 3.243267 CGGTATGGTCGACACATATGACA 60.243 47.826 18.91 3.48 33.77 3.58
7764 9697 2.359900 GCAACCTGAATCAGTGGGTAG 58.640 52.381 9.63 0.00 0.00 3.18
7770 9703 3.429547 CCTGAATCAGTGGGTAGAGAACG 60.430 52.174 9.63 0.00 0.00 3.95
7838 9771 6.644347 ACTTACAGTCATCCAGTATTTCCAG 58.356 40.000 0.00 0.00 0.00 3.86
7891 9824 0.464452 GGGACATTCCAGGAGGTACG 59.536 60.000 0.00 0.00 38.64 3.67
7917 10039 0.548197 ACGTGGAAGGGTGGGGATAA 60.548 55.000 0.00 0.00 0.00 1.75
7924 10139 3.052869 GGAAGGGTGGGGATAATTCAACT 60.053 47.826 0.00 0.00 0.00 3.16
7925 10140 3.669939 AGGGTGGGGATAATTCAACTG 57.330 47.619 0.00 0.00 0.00 3.16
7939 10154 4.652421 TTCAACTGCTTGCAGAAATGAA 57.348 36.364 26.71 25.04 0.00 2.57
7956 10171 2.497138 TGAAATGGGCAGCAGATATCG 58.503 47.619 0.00 0.00 0.00 2.92
8096 10311 6.376978 CAAATGAACGAGAAAAGAAGAGCAT 58.623 36.000 0.00 0.00 0.00 3.79
8116 10331 3.815856 TGTCAGGAGAGATCAAGATGC 57.184 47.619 0.00 0.00 0.00 3.91
8139 10354 5.337554 CAATACACCAGCAATGATGTCAAG 58.662 41.667 0.00 0.00 0.00 3.02
8282 10497 0.693049 TGGGAAAGCCAGAGAAGGAC 59.307 55.000 0.00 0.00 35.15 3.85
8290 10505 1.740718 GCCAGAGAAGGACCTAAAGCG 60.741 57.143 0.00 0.00 0.00 4.68
8411 10626 5.622180 ACAAGAGAGCGAGACAGGTATATA 58.378 41.667 0.00 0.00 0.00 0.86
8412 10627 6.242396 ACAAGAGAGCGAGACAGGTATATAT 58.758 40.000 0.00 0.00 0.00 0.86
8454 10683 6.314784 CCATAAAACTGCTGCTAGTGTTTAC 58.685 40.000 11.18 0.00 33.07 2.01
8457 10686 1.270094 ACTGCTGCTAGTGTTTACGCA 60.270 47.619 0.00 0.00 0.00 5.24
8458 10687 2.002586 CTGCTGCTAGTGTTTACGCAT 58.997 47.619 0.00 0.00 0.00 4.73
8459 10688 3.186909 CTGCTGCTAGTGTTTACGCATA 58.813 45.455 0.00 0.00 0.00 3.14
8479 10708 9.507329 ACGCATAATAAAGTTAATCTGGATGAT 57.493 29.630 0.00 0.00 36.89 2.45
8524 10753 2.021457 ACACACGGGAAGGAAAAACAG 58.979 47.619 0.00 0.00 0.00 3.16
8652 10881 9.912634 CTTGATGTAAATTAGTGGTGATGTTTT 57.087 29.630 0.00 0.00 0.00 2.43
8762 11105 4.443034 GCACAAAGTAATACTCCCTCCGAT 60.443 45.833 0.00 0.00 0.00 4.18
8832 11176 8.545229 AATGTTTGTCTTGTTCATTGTTCAAA 57.455 26.923 0.00 0.00 0.00 2.69
8843 11187 4.681744 TCATTGTTCAAACTGCAAGGTTC 58.318 39.130 0.00 0.00 43.11 3.62
8848 11192 4.036734 TGTTCAAACTGCAAGGTTCATCTC 59.963 41.667 0.00 0.00 43.11 2.75
8849 11193 4.090761 TCAAACTGCAAGGTTCATCTCT 57.909 40.909 0.00 0.00 43.11 3.10
8850 11194 4.067896 TCAAACTGCAAGGTTCATCTCTC 58.932 43.478 0.00 0.00 43.11 3.20
8851 11195 4.070716 CAAACTGCAAGGTTCATCTCTCT 58.929 43.478 0.00 0.00 43.11 3.10
8852 11196 3.331478 ACTGCAAGGTTCATCTCTCTG 57.669 47.619 0.00 0.00 39.30 3.35
8853 11197 2.027377 ACTGCAAGGTTCATCTCTCTGG 60.027 50.000 0.00 0.00 39.30 3.86
8854 11198 1.980765 TGCAAGGTTCATCTCTCTGGT 59.019 47.619 0.00 0.00 0.00 4.00
8855 11199 2.289882 TGCAAGGTTCATCTCTCTGGTG 60.290 50.000 0.00 0.00 0.00 4.17
8856 11200 2.289945 GCAAGGTTCATCTCTCTGGTGT 60.290 50.000 0.00 0.00 0.00 4.16
8857 11201 3.808618 GCAAGGTTCATCTCTCTGGTGTT 60.809 47.826 0.00 0.00 0.00 3.32
8858 11202 4.392940 CAAGGTTCATCTCTCTGGTGTTT 58.607 43.478 0.00 0.00 0.00 2.83
8859 11203 4.013267 AGGTTCATCTCTCTGGTGTTTG 57.987 45.455 0.00 0.00 0.00 2.93
8860 11204 2.485814 GGTTCATCTCTCTGGTGTTTGC 59.514 50.000 0.00 0.00 0.00 3.68
8861 11205 3.406764 GTTCATCTCTCTGGTGTTTGCT 58.593 45.455 0.00 0.00 0.00 3.91
8862 11206 3.777106 TCATCTCTCTGGTGTTTGCTT 57.223 42.857 0.00 0.00 0.00 3.91
8863 11207 4.890158 TCATCTCTCTGGTGTTTGCTTA 57.110 40.909 0.00 0.00 0.00 3.09
8864 11208 4.569943 TCATCTCTCTGGTGTTTGCTTAC 58.430 43.478 0.00 0.00 0.00 2.34
8865 11209 3.026630 TCTCTCTGGTGTTTGCTTACG 57.973 47.619 0.00 0.00 0.00 3.18
8866 11210 2.364324 TCTCTCTGGTGTTTGCTTACGT 59.636 45.455 0.00 0.00 0.00 3.57
8867 11211 3.131396 CTCTCTGGTGTTTGCTTACGTT 58.869 45.455 0.00 0.00 0.00 3.99
8868 11212 3.537580 TCTCTGGTGTTTGCTTACGTTT 58.462 40.909 0.00 0.00 0.00 3.60
8869 11213 3.311322 TCTCTGGTGTTTGCTTACGTTTG 59.689 43.478 0.00 0.00 0.00 2.93
8870 11214 3.271729 TCTGGTGTTTGCTTACGTTTGA 58.728 40.909 0.00 0.00 0.00 2.69
8871 11215 3.880490 TCTGGTGTTTGCTTACGTTTGAT 59.120 39.130 0.00 0.00 0.00 2.57
8872 11216 4.024387 TCTGGTGTTTGCTTACGTTTGATC 60.024 41.667 0.00 0.00 0.00 2.92
8873 11217 3.880490 TGGTGTTTGCTTACGTTTGATCT 59.120 39.130 0.00 0.00 0.00 2.75
8874 11218 4.219033 GGTGTTTGCTTACGTTTGATCTG 58.781 43.478 0.00 0.00 0.00 2.90
8875 11219 4.024387 GGTGTTTGCTTACGTTTGATCTGA 60.024 41.667 0.00 0.00 0.00 3.27
8876 11220 5.334879 GGTGTTTGCTTACGTTTGATCTGAT 60.335 40.000 0.00 0.00 0.00 2.90
8877 11221 6.128391 GGTGTTTGCTTACGTTTGATCTGATA 60.128 38.462 0.00 0.00 0.00 2.15
8878 11222 7.414098 GGTGTTTGCTTACGTTTGATCTGATAT 60.414 37.037 0.00 0.00 0.00 1.63
8879 11223 7.962918 GTGTTTGCTTACGTTTGATCTGATATT 59.037 33.333 0.00 0.00 0.00 1.28
8880 11224 8.511321 TGTTTGCTTACGTTTGATCTGATATTT 58.489 29.630 0.00 0.00 0.00 1.40
8881 11225 9.982291 GTTTGCTTACGTTTGATCTGATATTTA 57.018 29.630 0.00 0.00 0.00 1.40
8882 11226 9.982291 TTTGCTTACGTTTGATCTGATATTTAC 57.018 29.630 0.00 0.00 0.00 2.01
8883 11227 8.710835 TGCTTACGTTTGATCTGATATTTACA 57.289 30.769 0.00 0.00 0.00 2.41
8884 11228 8.600625 TGCTTACGTTTGATCTGATATTTACAC 58.399 33.333 0.00 0.00 0.00 2.90
8885 11229 8.818057 GCTTACGTTTGATCTGATATTTACACT 58.182 33.333 0.00 0.00 0.00 3.55
8888 11232 8.771920 ACGTTTGATCTGATATTTACACTTGA 57.228 30.769 0.00 0.00 0.00 3.02
8889 11233 8.873830 ACGTTTGATCTGATATTTACACTTGAG 58.126 33.333 0.00 0.00 0.00 3.02
8890 11234 7.848051 CGTTTGATCTGATATTTACACTTGAGC 59.152 37.037 0.00 0.00 0.00 4.26
8922 11318 5.555017 TGAAAGATGTCTCCCTTTCTCAAG 58.445 41.667 13.70 0.00 45.05 3.02
8923 11319 3.625649 AGATGTCTCCCTTTCTCAAGC 57.374 47.619 0.00 0.00 0.00 4.01
8924 11320 3.180507 AGATGTCTCCCTTTCTCAAGCT 58.819 45.455 0.00 0.00 0.00 3.74
8925 11321 3.197549 AGATGTCTCCCTTTCTCAAGCTC 59.802 47.826 0.00 0.00 0.00 4.09
8970 11368 2.036346 AGAAAGCAAAGCCACCATGTTC 59.964 45.455 0.00 0.00 0.00 3.18
8987 11487 2.657848 TGTTCGCATTACGTACTGTTCG 59.342 45.455 13.66 9.87 42.03 3.95
8998 11498 2.096980 CGTACTGTTCGCTGACTGGATA 59.903 50.000 0.00 0.00 0.00 2.59
9002 11502 1.221414 GTTCGCTGACTGGATATGCC 58.779 55.000 0.00 0.00 37.10 4.40
9012 11512 2.359230 GATATGCCGGCCAGCCTC 60.359 66.667 26.77 9.89 0.00 4.70
9014 11514 3.188015 ATATGCCGGCCAGCCTCTG 62.188 63.158 26.77 0.00 0.00 3.35
9026 11550 1.602851 CAGCCTCTGCAGATATGTTGC 59.397 52.381 18.63 12.70 41.13 4.17
9049 11579 1.958288 ACCTTGTCCAGCTACAGGAT 58.042 50.000 10.35 0.00 37.52 3.24
9085 11617 3.612371 GACTCGCGTCCGACTTGCT 62.612 63.158 5.77 0.00 38.82 3.91
9086 11618 2.249557 GACTCGCGTCCGACTTGCTA 62.250 60.000 5.77 0.00 38.82 3.49
9087 11619 1.583967 CTCGCGTCCGACTTGCTAG 60.584 63.158 5.77 0.00 38.82 3.42
9088 11620 3.248171 CGCGTCCGACTTGCTAGC 61.248 66.667 8.10 8.10 36.29 3.42
9089 11621 2.886124 GCGTCCGACTTGCTAGCC 60.886 66.667 13.29 0.00 0.00 3.93
9090 11622 2.579787 CGTCCGACTTGCTAGCCG 60.580 66.667 13.29 8.24 0.00 5.52
9091 11623 2.572284 GTCCGACTTGCTAGCCGT 59.428 61.111 13.29 9.48 0.00 5.68
9092 11624 1.080025 GTCCGACTTGCTAGCCGTT 60.080 57.895 13.29 0.00 0.00 4.44
9093 11625 1.080093 TCCGACTTGCTAGCCGTTG 60.080 57.895 13.29 12.71 0.00 4.10
9094 11626 2.740714 CCGACTTGCTAGCCGTTGC 61.741 63.158 13.29 0.00 37.95 4.17
9106 13610 1.732259 AGCCGTTGCGTAAGATTCAAG 59.268 47.619 0.00 0.00 44.33 3.02
9107 13611 1.202031 GCCGTTGCGTAAGATTCAAGG 60.202 52.381 0.00 0.00 43.02 3.61
9108 13612 1.202031 CCGTTGCGTAAGATTCAAGGC 60.202 52.381 0.00 0.00 43.02 4.35
9119 13623 3.894547 TTCAAGGCCTCGAACCCGC 62.895 63.158 5.23 0.00 35.37 6.13
9153 13711 4.003648 AGTCCGACAGCCTTTAAAATCAG 58.996 43.478 0.40 0.00 0.00 2.90
9156 13714 3.756434 CCGACAGCCTTTAAAATCAGGAA 59.244 43.478 0.00 0.00 30.81 3.36
9208 13777 0.603569 AGTTGGATCGTGTCGAGCTT 59.396 50.000 7.29 0.00 42.17 3.74
9218 13789 2.526688 CGTGTCGAGCTTTATCGTTCTC 59.473 50.000 0.00 0.00 43.20 2.87
9219 13790 3.728268 CGTGTCGAGCTTTATCGTTCTCT 60.728 47.826 0.00 0.00 43.20 3.10
9221 13792 2.532317 GTCGAGCTTTATCGTTCTCTGC 59.468 50.000 0.00 0.00 43.20 4.26
9222 13793 1.514811 CGAGCTTTATCGTTCTCTGCG 59.485 52.381 0.00 0.00 37.91 5.18
9223 13794 1.256635 GAGCTTTATCGTTCTCTGCGC 59.743 52.381 0.00 0.00 0.00 6.09
9224 13795 1.134965 AGCTTTATCGTTCTCTGCGCT 60.135 47.619 9.73 0.00 0.00 5.92
9234 13805 0.532640 TCTCTGCGCTGCTTCAAACA 60.533 50.000 9.73 0.00 0.00 2.83
9496 14112 3.807538 CTGCCACCACATGCGCTC 61.808 66.667 9.73 0.00 0.00 5.03
9559 14175 0.673437 AACAAGGACCGTTGGCATTG 59.327 50.000 7.27 0.00 31.06 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.160252 CCATTCCTCATCCGAACCAAATTT 59.840 41.667 0.00 0.00 0.00 1.82
11 12 3.701040 CCATTCCTCATCCGAACCAAATT 59.299 43.478 0.00 0.00 0.00 1.82
40 41 5.590259 CGTTCATTATCACCCTTCAAATCCT 59.410 40.000 0.00 0.00 0.00 3.24
183 184 4.019681 TCTGACCATTTTTACGGGATCTGT 60.020 41.667 0.00 0.00 0.00 3.41
268 269 4.695606 AGGGGATAATATACGGGACATGT 58.304 43.478 0.00 0.00 0.00 3.21
269 270 5.659525 TGTAGGGGATAATATACGGGACATG 59.340 44.000 0.00 0.00 0.00 3.21
271 272 5.273833 TGTAGGGGATAATATACGGGACA 57.726 43.478 0.00 0.00 0.00 4.02
327 330 2.173143 TGACCAGTTTACGGGTTTCCTT 59.827 45.455 6.16 0.00 44.40 3.36
331 334 1.941975 CGTTGACCAGTTTACGGGTTT 59.058 47.619 6.16 0.00 44.40 3.27
392 395 1.493871 AGATAGCCATTGCCAAGCTCT 59.506 47.619 0.00 0.00 38.06 4.09
408 411 3.536917 CCGGCGGCACTCCAGATA 61.537 66.667 15.42 0.00 28.55 1.98
495 515 0.808453 AACACACGCACGTAACTGCT 60.808 50.000 0.00 0.00 34.77 4.24
521 541 1.275291 ACACGTATGCAGTTACTGGCT 59.725 47.619 14.63 0.67 31.21 4.75
553 573 1.538512 ACGAATGAACTCGAACTCCGA 59.461 47.619 0.00 0.00 46.35 4.55
580 600 2.896168 ACGTTTCTTCTTCCACGTGAA 58.104 42.857 19.30 8.62 43.94 3.18
598 618 5.751243 TTTTCCTTCTTTTTCTCCTCACG 57.249 39.130 0.00 0.00 0.00 4.35
668 688 1.200484 TCCCTAAAACGAATTTGCGGC 59.800 47.619 0.00 0.00 35.12 6.53
671 691 3.254903 ACAGGTCCCTAAAACGAATTTGC 59.745 43.478 0.00 0.00 32.27 3.68
692 712 2.531508 CGCGTCCGGTAAAACAGTATAC 59.468 50.000 0.00 0.00 0.00 1.47
699 719 1.774646 CAAAAACGCGTCCGGTAAAAC 59.225 47.619 14.44 0.00 39.22 2.43
704 724 3.175976 CTGCAAAAACGCGTCCGGT 62.176 57.895 14.44 0.00 39.22 5.28
705 725 2.426752 CTGCAAAAACGCGTCCGG 60.427 61.111 14.44 3.76 39.22 5.14
706 726 2.182614 ATCCTGCAAAAACGCGTCCG 62.183 55.000 14.44 2.05 41.14 4.79
729 750 3.879932 AAAGTCGTTAGAGCAACTTGC 57.120 42.857 5.55 5.55 45.46 4.01
730 751 7.855904 ACAAATTAAAGTCGTTAGAGCAACTTG 59.144 33.333 0.00 0.00 34.77 3.16
742 764 9.887406 ATTACGAAAATCACAAATTAAAGTCGT 57.113 25.926 0.00 0.00 40.65 4.34
766 788 9.793252 GTGCAAAATCACTTTGATCACTATATT 57.207 29.630 0.00 0.00 46.35 1.28
770 792 5.468409 TCGTGCAAAATCACTTTGATCACTA 59.532 36.000 0.00 0.00 46.35 2.74
772 794 4.536065 TCGTGCAAAATCACTTTGATCAC 58.464 39.130 0.00 0.96 46.35 3.06
773 795 4.514816 TCTCGTGCAAAATCACTTTGATCA 59.485 37.500 0.00 0.00 46.35 2.92
785 807 2.902705 ACCTGTACTCTCGTGCAAAA 57.097 45.000 0.00 0.00 35.30 2.44
852 875 2.584791 CTCGGTTTTGATTGCTTTCGG 58.415 47.619 0.00 0.00 0.00 4.30
896 1126 2.202260 TGTCGTCGCGATGTCGTC 60.202 61.111 26.40 16.40 42.22 4.20
897 1127 2.501222 GTGTCGTCGCGATGTCGT 60.501 61.111 26.40 0.00 42.22 4.34
898 1128 2.488792 CTGTGTCGTCGCGATGTCG 61.489 63.158 26.40 18.74 38.42 4.35
899 1129 2.778997 GCTGTGTCGTCGCGATGTC 61.779 63.158 26.40 21.58 38.42 3.06
1064 1301 3.307108 CCGCTAGGGCTAGGGCTC 61.307 72.222 0.19 0.00 42.61 4.70
1197 1434 2.442413 GATATGGGGAGAGAGTCGAGG 58.558 57.143 0.00 0.00 0.00 4.63
1339 1576 6.990349 CCCAATCCGAGCTACTTAGATTAAAA 59.010 38.462 0.00 0.00 0.00 1.52
1516 1761 4.885413 TCAGGAATTTTCAATGCAACAGG 58.115 39.130 0.00 0.00 0.00 4.00
1649 1894 3.391382 CCCCTTCCTTCTCGCGGT 61.391 66.667 6.13 0.00 0.00 5.68
1949 2293 7.239763 TGAGATGATGTAAAGTACCAAGTGA 57.760 36.000 0.00 0.00 0.00 3.41
2021 2370 5.163395 GCCTCTTATAACTAACTGCAGGTCT 60.163 44.000 19.93 4.49 0.00 3.85
2062 2411 8.459635 GCAGTATCACAACCTCGATATTCTATA 58.540 37.037 0.00 0.00 0.00 1.31
2070 2419 2.497675 ACAGCAGTATCACAACCTCGAT 59.502 45.455 0.00 0.00 0.00 3.59
2073 2422 3.003480 GGAACAGCAGTATCACAACCTC 58.997 50.000 0.00 0.00 0.00 3.85
2124 2482 1.526575 AACCCTGCTTCACGCCATTG 61.527 55.000 0.00 0.00 38.05 2.82
2199 2559 0.394216 ACTTGTGCAGAACAGTGGCA 60.394 50.000 0.00 0.00 40.74 4.92
2288 2875 4.028131 ACTAACCACTAATCGATGGGTGA 58.972 43.478 23.78 11.97 40.59 4.02
2464 3182 6.757897 TGATAAATTGATTCCGCAAGTTCT 57.242 33.333 0.00 0.00 37.30 3.01
2503 3221 5.180868 GTCCTCATCATCATTATGCTTCACC 59.819 44.000 0.00 0.00 32.76 4.02
2559 3277 3.065786 ACCACAATCTAATGCTGCAATCG 59.934 43.478 6.36 0.00 0.00 3.34
2617 3335 2.420687 GGGACACTCATTAAGCTCCCAG 60.421 54.545 0.00 0.00 41.89 4.45
2811 3529 0.038251 TACTGCAGCCTTGACTGTCG 60.038 55.000 15.27 0.00 39.96 4.35
2878 3596 3.133003 GCTTGAGAGGGTATAGTGCTGAA 59.867 47.826 0.00 0.00 0.00 3.02
2885 3603 1.996798 TCGGGCTTGAGAGGGTATAG 58.003 55.000 0.00 0.00 0.00 1.31
2902 3620 2.744202 CAAGTCTGAAAAGGTCCCATCG 59.256 50.000 0.00 0.00 0.00 3.84
2951 3669 7.261829 CCTCTGAAGGAAAATCAATGATCTC 57.738 40.000 0.00 0.00 46.67 2.75
3261 3979 2.438434 CCCGGTTGCATGGACCTC 60.438 66.667 0.00 0.00 34.95 3.85
3329 4047 3.657634 TGACTTGCAGCTCAGAGTTTAG 58.342 45.455 0.00 0.00 0.00 1.85
3423 4141 9.944663 GAACATAAGTATTGTTCTGTTTGTCAA 57.055 29.630 8.82 0.00 46.03 3.18
3441 4159 6.315714 TGAGGTAGAGGGATAGGAACATAAG 58.684 44.000 0.00 0.00 0.00 1.73
3483 4201 4.092091 GTCTGTATTTCTGAGCTGTTTCCG 59.908 45.833 0.00 0.00 0.00 4.30
3532 4250 5.356426 TCTGAACTCGACTTTTTCATGTGA 58.644 37.500 0.00 0.00 0.00 3.58
3539 4257 4.398044 TGCCTTTTCTGAACTCGACTTTTT 59.602 37.500 0.00 0.00 0.00 1.94
3894 4612 1.005215 CAAGGCCATCTGAACCTCCTT 59.995 52.381 5.01 0.00 34.54 3.36
4175 4893 4.922206 ACAAGGATCTTTTGGCTGATACA 58.078 39.130 12.81 0.00 0.00 2.29
4242 4960 7.200778 TCAACAAATGTCATCTTCATCGAAA 57.799 32.000 0.00 0.00 0.00 3.46
4273 4991 2.584835 AAGATGCAGCAGGGTGTTTA 57.415 45.000 4.07 0.00 0.00 2.01
4326 5056 4.396166 CGCAGTCTGATTTTGGTAATCCTT 59.604 41.667 3.32 0.00 34.23 3.36
4480 5215 5.866075 TGTTGTTGTTGTTGCATGAAATTG 58.134 33.333 0.00 0.00 0.00 2.32
4493 5228 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
4494 5229 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
4495 5230 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
4496 5231 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
4497 5232 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
4498 5233 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
4499 5234 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
4500 5235 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
4501 5236 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
4502 5237 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
4503 5238 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
4504 5239 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
4505 5240 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
4506 5241 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
4517 5252 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
4518 5253 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
4519 5254 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
4520 5255 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
4521 5256 1.134371 GCTCTAGCCTACCCCAACTTG 60.134 57.143 0.00 0.00 34.31 3.16
4522 5257 1.205055 GCTCTAGCCTACCCCAACTT 58.795 55.000 0.00 0.00 34.31 2.66
4523 5258 0.340208 AGCTCTAGCCTACCCCAACT 59.660 55.000 0.00 0.00 43.38 3.16
4524 5259 0.466124 CAGCTCTAGCCTACCCCAAC 59.534 60.000 0.00 0.00 43.38 3.77
4525 5260 0.338467 TCAGCTCTAGCCTACCCCAA 59.662 55.000 0.00 0.00 43.38 4.12
4526 5261 0.338467 TTCAGCTCTAGCCTACCCCA 59.662 55.000 0.00 0.00 43.38 4.96
4527 5262 1.139256 GTTTCAGCTCTAGCCTACCCC 59.861 57.143 0.00 0.00 43.38 4.95
4528 5263 1.139256 GGTTTCAGCTCTAGCCTACCC 59.861 57.143 0.00 0.00 43.38 3.69
4529 5264 1.139256 GGGTTTCAGCTCTAGCCTACC 59.861 57.143 0.00 1.68 43.38 3.18
4530 5265 1.831736 TGGGTTTCAGCTCTAGCCTAC 59.168 52.381 0.00 0.00 43.38 3.18
4531 5266 2.247699 TGGGTTTCAGCTCTAGCCTA 57.752 50.000 0.00 0.00 43.38 3.93
4532 5267 1.589414 ATGGGTTTCAGCTCTAGCCT 58.411 50.000 0.00 0.00 43.38 4.58
4533 5268 3.134804 TCTTATGGGTTTCAGCTCTAGCC 59.865 47.826 0.00 0.00 43.38 3.93
4534 5269 4.408182 TCTTATGGGTTTCAGCTCTAGC 57.592 45.455 0.00 0.00 42.49 3.42
4535 5270 6.418057 AGATCTTATGGGTTTCAGCTCTAG 57.582 41.667 0.00 0.00 0.00 2.43
4536 5271 5.010112 CGAGATCTTATGGGTTTCAGCTCTA 59.990 44.000 0.00 0.00 0.00 2.43
4537 5272 4.202202 CGAGATCTTATGGGTTTCAGCTCT 60.202 45.833 0.00 0.00 0.00 4.09
4538 5273 4.054671 CGAGATCTTATGGGTTTCAGCTC 58.945 47.826 0.00 0.00 0.00 4.09
4539 5274 3.742640 GCGAGATCTTATGGGTTTCAGCT 60.743 47.826 0.00 0.00 0.00 4.24
4540 5275 2.545946 GCGAGATCTTATGGGTTTCAGC 59.454 50.000 0.00 0.00 0.00 4.26
4541 5276 3.797039 TGCGAGATCTTATGGGTTTCAG 58.203 45.455 0.00 0.00 0.00 3.02
4542 5277 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
4543 5278 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
4544 5279 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
4545 5280 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
4546 5281 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
4547 5282 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
4548 5283 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
4549 5284 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
4550 5285 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
4551 5286 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
4552 5287 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
4553 5288 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
4554 5289 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
4555 5290 1.278985 TCCATGAGTTGGTTGCGAGAT 59.721 47.619 0.00 0.00 46.52 2.75
4556 5291 0.684535 TCCATGAGTTGGTTGCGAGA 59.315 50.000 0.00 0.00 46.52 4.04
4557 5292 1.197721 GTTCCATGAGTTGGTTGCGAG 59.802 52.381 0.00 0.00 46.52 5.03
4558 5293 1.234821 GTTCCATGAGTTGGTTGCGA 58.765 50.000 0.00 0.00 46.52 5.10
4559 5294 0.950836 TGTTCCATGAGTTGGTTGCG 59.049 50.000 0.00 0.00 46.52 4.85
4560 5295 3.665745 ATTGTTCCATGAGTTGGTTGC 57.334 42.857 0.00 0.00 46.52 4.17
4561 5296 5.599732 TGAAATTGTTCCATGAGTTGGTTG 58.400 37.500 0.00 0.00 46.52 3.77
4562 5297 5.867903 TGAAATTGTTCCATGAGTTGGTT 57.132 34.783 0.00 0.00 46.52 3.67
4563 5298 5.786311 CATGAAATTGTTCCATGAGTTGGT 58.214 37.500 0.00 0.00 46.52 3.67
4565 5300 5.231702 TGCATGAAATTGTTCCATGAGTTG 58.768 37.500 0.00 0.00 32.28 3.16
4566 5301 5.471556 TGCATGAAATTGTTCCATGAGTT 57.528 34.783 0.00 0.00 32.28 3.01
4567 5302 5.471556 TTGCATGAAATTGTTCCATGAGT 57.528 34.783 0.00 0.00 32.28 3.41
4568 5303 4.328983 GCTTGCATGAAATTGTTCCATGAG 59.671 41.667 3.33 0.00 32.28 2.90
4569 5304 4.247258 GCTTGCATGAAATTGTTCCATGA 58.753 39.130 3.33 0.00 32.28 3.07
4570 5305 3.997681 TGCTTGCATGAAATTGTTCCATG 59.002 39.130 3.33 0.00 32.28 3.66
4577 5312 4.177165 TGGTAGTGCTTGCATGAAATTG 57.823 40.909 3.33 0.00 0.00 2.32
4580 5315 4.662468 TTTTGGTAGTGCTTGCATGAAA 57.338 36.364 3.33 0.00 0.00 2.69
4607 5343 8.162878 ACTCATTCTGTATGCTAAATGGAATG 57.837 34.615 0.00 0.00 39.54 2.67
4610 5346 9.109393 GTTTACTCATTCTGTATGCTAAATGGA 57.891 33.333 8.17 0.00 34.06 3.41
4659 5396 5.748402 TGACACAGCTGATTGGATCTTATT 58.252 37.500 23.35 0.00 0.00 1.40
4703 5440 2.289547 CCGACACGAAAAACAAGTGGAT 59.710 45.455 0.00 0.00 39.95 3.41
4718 5455 5.441709 TGATTTTTAAAAGGGTCCGACAC 57.558 39.130 0.14 0.00 0.00 3.67
4740 5478 9.097257 CTTGTGAATAACTGGTTTCAACATTTT 57.903 29.630 0.00 0.00 33.90 1.82
4747 5485 6.378564 TGGTTTCTTGTGAATAACTGGTTTCA 59.621 34.615 0.00 0.00 31.56 2.69
4748 5486 6.801575 TGGTTTCTTGTGAATAACTGGTTTC 58.198 36.000 0.00 0.00 31.56 2.78
4749 5487 6.783708 TGGTTTCTTGTGAATAACTGGTTT 57.216 33.333 0.00 0.00 31.56 3.27
4750 5488 6.976934 ATGGTTTCTTGTGAATAACTGGTT 57.023 33.333 0.00 0.00 31.56 3.67
4780 5518 5.472137 TCAGCCTGTTCAAAACTATAACCAC 59.528 40.000 0.00 0.00 0.00 4.16
4805 5543 4.329528 TGAAGTTCAAATGTTGCAAAGCAC 59.670 37.500 0.00 0.00 38.71 4.40
4807 5545 4.567959 AGTGAAGTTCAAATGTTGCAAAGC 59.432 37.500 7.25 0.00 0.00 3.51
4811 5549 3.698539 TCCAGTGAAGTTCAAATGTTGCA 59.301 39.130 7.25 0.00 0.00 4.08
4840 5578 9.248291 GCTCACAAGATTGAAAACAAATTTAGA 57.752 29.630 0.00 0.00 0.00 2.10
4844 5582 7.846644 TTGCTCACAAGATTGAAAACAAATT 57.153 28.000 0.00 0.00 0.00 1.82
4856 5594 0.792640 CGCGTCTTTGCTCACAAGAT 59.207 50.000 0.00 0.00 37.04 2.40
4858 5596 1.439365 GCGCGTCTTTGCTCACAAG 60.439 57.895 8.43 0.00 37.04 3.16
4873 5612 0.179202 TGTTCATACAACGCATGCGC 60.179 50.000 38.15 19.48 44.19 6.09
4874 5613 1.128507 ACTGTTCATACAACGCATGCG 59.871 47.619 36.79 36.79 46.03 4.73
4876 5615 4.403015 TGAACTGTTCATACAACGCATG 57.597 40.909 18.69 0.00 34.08 4.06
4888 5627 4.442073 GTGACAAACATGCATGAACTGTTC 59.558 41.667 32.75 20.86 32.18 3.18
4891 5630 4.233123 AGTGACAAACATGCATGAACTG 57.767 40.909 32.75 24.54 0.00 3.16
4901 5640 4.470334 ACAAAAGCCAAGTGACAAACAT 57.530 36.364 0.00 0.00 0.00 2.71
4902 5641 3.951775 ACAAAAGCCAAGTGACAAACA 57.048 38.095 0.00 0.00 0.00 2.83
4903 5642 4.929211 AGAAACAAAAGCCAAGTGACAAAC 59.071 37.500 0.00 0.00 0.00 2.93
4904 5643 5.146010 AGAAACAAAAGCCAAGTGACAAA 57.854 34.783 0.00 0.00 0.00 2.83
4909 5648 5.890334 TCAGTTAGAAACAAAAGCCAAGTG 58.110 37.500 0.00 0.00 0.00 3.16
4911 5650 8.567948 TCTAATCAGTTAGAAACAAAAGCCAAG 58.432 33.333 0.00 0.00 42.46 3.61
4915 5654 8.774586 TCTGTCTAATCAGTTAGAAACAAAAGC 58.225 33.333 0.00 0.00 45.79 3.51
5345 6282 6.389869 AGGTAGATGATTTATTTGGACCTCCA 59.610 38.462 0.00 0.00 45.94 3.86
5617 6555 4.755123 GTGCATGGTAAAACAGTAGTGAGT 59.245 41.667 4.09 0.00 0.00 3.41
5701 6640 3.393426 TGGAACGGAGGGAGTAATAGT 57.607 47.619 0.00 0.00 0.00 2.12
5706 6715 4.098894 AGTATTTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
5710 6719 3.418047 ACAAGTATTTTGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
5716 6725 5.622770 ATCCACGACAAGTATTTTGGAAC 57.377 39.130 0.00 0.00 0.00 3.62
5725 6734 7.972832 ATTTGAACTAAATCCACGACAAGTA 57.027 32.000 0.00 0.00 33.79 2.24
5727 6736 7.860373 TCAAATTTGAACTAAATCCACGACAAG 59.140 33.333 18.45 0.00 38.01 3.16
5744 6755 5.818336 TGTCGTGGTTAGAGTTCAAATTTGA 59.182 36.000 16.91 16.91 34.92 2.69
5745 6756 6.055231 TGTCGTGGTTAGAGTTCAAATTTG 57.945 37.500 12.15 12.15 0.00 2.32
5746 6757 6.317893 ACTTGTCGTGGTTAGAGTTCAAATTT 59.682 34.615 0.00 0.00 0.00 1.82
5747 6758 5.820947 ACTTGTCGTGGTTAGAGTTCAAATT 59.179 36.000 0.00 0.00 0.00 1.82
5748 6759 5.365619 ACTTGTCGTGGTTAGAGTTCAAAT 58.634 37.500 0.00 0.00 0.00 2.32
5749 6760 4.761975 ACTTGTCGTGGTTAGAGTTCAAA 58.238 39.130 0.00 0.00 0.00 2.69
5750 6761 4.395959 ACTTGTCGTGGTTAGAGTTCAA 57.604 40.909 0.00 0.00 0.00 2.69
5751 6762 5.717078 ATACTTGTCGTGGTTAGAGTTCA 57.283 39.130 0.00 0.00 0.00 3.18
5752 6763 7.288672 CAAAATACTTGTCGTGGTTAGAGTTC 58.711 38.462 0.00 0.00 0.00 3.01
5753 6764 6.204108 CCAAAATACTTGTCGTGGTTAGAGTT 59.796 38.462 0.00 0.00 0.00 3.01
5754 6765 5.699458 CCAAAATACTTGTCGTGGTTAGAGT 59.301 40.000 0.00 0.00 0.00 3.24
5755 6766 5.929992 TCCAAAATACTTGTCGTGGTTAGAG 59.070 40.000 0.00 0.00 0.00 2.43
5756 6767 5.697633 GTCCAAAATACTTGTCGTGGTTAGA 59.302 40.000 0.00 0.00 0.00 2.10
5757 6768 5.389098 CGTCCAAAATACTTGTCGTGGTTAG 60.389 44.000 0.00 0.00 0.00 2.34
5758 6769 4.448395 CGTCCAAAATACTTGTCGTGGTTA 59.552 41.667 0.00 0.00 0.00 2.85
5759 6770 3.249080 CGTCCAAAATACTTGTCGTGGTT 59.751 43.478 0.00 0.00 0.00 3.67
5760 6771 2.803956 CGTCCAAAATACTTGTCGTGGT 59.196 45.455 0.00 0.00 0.00 4.16
5761 6772 2.158841 CCGTCCAAAATACTTGTCGTGG 59.841 50.000 0.00 0.00 0.00 4.94
5762 6773 3.061322 TCCGTCCAAAATACTTGTCGTG 58.939 45.455 0.00 0.00 0.00 4.35
5764 6775 2.671396 CCTCCGTCCAAAATACTTGTCG 59.329 50.000 0.00 0.00 0.00 4.35
5765 6776 3.007635 CCCTCCGTCCAAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
5766 6777 2.640826 TCCCTCCGTCCAAAATACTTGT 59.359 45.455 0.00 0.00 0.00 3.16
5767 6778 3.270877 CTCCCTCCGTCCAAAATACTTG 58.729 50.000 0.00 0.00 0.00 3.16
5768 6779 2.910977 ACTCCCTCCGTCCAAAATACTT 59.089 45.455 0.00 0.00 0.00 2.24
5769 6780 2.547990 ACTCCCTCCGTCCAAAATACT 58.452 47.619 0.00 0.00 0.00 2.12
5770 6781 4.684484 ATACTCCCTCCGTCCAAAATAC 57.316 45.455 0.00 0.00 0.00 1.89
5771 6782 7.383156 AATAATACTCCCTCCGTCCAAAATA 57.617 36.000 0.00 0.00 0.00 1.40
5774 6785 5.703730 AAATAATACTCCCTCCGTCCAAA 57.296 39.130 0.00 0.00 0.00 3.28
5775 6786 5.703730 AAAATAATACTCCCTCCGTCCAA 57.296 39.130 0.00 0.00 0.00 3.53
5778 6789 6.822170 AGTTCAAAAATAATACTCCCTCCGTC 59.178 38.462 0.00 0.00 0.00 4.79
5779 6790 6.718294 AGTTCAAAAATAATACTCCCTCCGT 58.282 36.000 0.00 0.00 0.00 4.69
5780 6791 7.335924 TGAAGTTCAAAAATAATACTCCCTCCG 59.664 37.037 2.20 0.00 0.00 4.63
5781 6792 8.575649 TGAAGTTCAAAAATAATACTCCCTCC 57.424 34.615 2.20 0.00 0.00 4.30
5875 7774 1.546923 TGCAGCCATTGATGAACTTGG 59.453 47.619 0.00 0.00 0.00 3.61
6095 8013 4.011966 TCTTGCTCATCTTCTCTTGCAA 57.988 40.909 0.00 0.00 37.96 4.08
6145 8063 0.519077 GCAGTTGAGTAGTTGCTGGC 59.481 55.000 0.00 0.00 33.88 4.85
6453 8374 2.649190 TGCTGCCAACTTTTACACTCA 58.351 42.857 0.00 0.00 0.00 3.41
6454 8375 3.253188 TGATGCTGCCAACTTTTACACTC 59.747 43.478 0.00 0.00 0.00 3.51
6481 8402 4.291792 TCACCGGGTTAGATAATCTTCCA 58.708 43.478 6.32 0.00 0.00 3.53
6624 8545 2.500098 GCACTGAGTATTAGGTCCACCA 59.500 50.000 0.00 0.00 38.89 4.17
6625 8546 2.766828 AGCACTGAGTATTAGGTCCACC 59.233 50.000 0.00 0.00 0.00 4.61
6734 8655 2.236146 TGTTGGTTGCGATGGTCTCTAT 59.764 45.455 0.00 0.00 0.00 1.98
6748 8669 7.765695 ACTAATTGACATCAGAATGTTGGTT 57.234 32.000 0.00 0.00 46.20 3.67
6844 8765 6.118170 ACTCAAAGACAGGAATACCATGATG 58.882 40.000 0.00 0.00 38.94 3.07
6855 8776 6.155221 ACTGCAGATATAACTCAAAGACAGGA 59.845 38.462 23.35 0.00 0.00 3.86
6929 8850 2.849294 ACAGAAGAAAGGGAGTGAGC 57.151 50.000 0.00 0.00 0.00 4.26
7024 8945 1.153289 CTCATCTGCCGACTTGGGG 60.153 63.158 0.00 0.00 38.63 4.96
7151 9072 3.609853 TGTATGCAGACAAGGGATTGAC 58.390 45.455 12.63 0.00 0.00 3.18
7212 9133 2.108514 CGGCGCTCATGTGACCAAT 61.109 57.895 7.64 0.00 0.00 3.16
7231 9152 6.375455 ACAGGTACTTTTCAATAGCCTGAATG 59.625 38.462 13.71 0.00 43.22 2.67
7241 9162 4.755123 CGGAGACAACAGGTACTTTTCAAT 59.245 41.667 0.00 0.00 34.60 2.57
7246 9167 1.414919 TGCGGAGACAACAGGTACTTT 59.585 47.619 0.00 0.00 34.60 2.66
7336 9257 5.728637 TGTCTGAATCTACAGAAGAGCAA 57.271 39.130 0.00 0.00 46.34 3.91
7504 9431 1.345741 TCAGAGCACCTCCTGAACTTG 59.654 52.381 0.00 0.00 0.00 3.16
7522 9449 1.395635 GCATTGCATCCTCCACATCA 58.604 50.000 3.15 0.00 0.00 3.07
7547 9474 5.576563 TCAAACATAAAGACCTCTGGGAA 57.423 39.130 0.00 0.00 36.25 3.97
7567 9494 4.019321 CCTCCCCTACTCAAACTTTGATCA 60.019 45.833 4.65 0.00 39.30 2.92
7607 9534 3.377485 TCAGTATCGTGCTCTCTTGGTAC 59.623 47.826 0.00 0.00 0.00 3.34
7626 9553 5.838529 TCTGATTGCCAATTATTGCATCAG 58.161 37.500 21.40 21.40 40.48 2.90
7715 9648 4.316205 TGTCATATGTGTCGACCATACC 57.684 45.455 21.42 15.19 0.00 2.73
7736 9669 3.009916 ACTGATTCAGGTTGCCAAGAGAT 59.990 43.478 17.66 0.00 35.51 2.75
7764 9697 6.637254 GGGAAAAGAGTTTTTGATTCGTTCTC 59.363 38.462 0.00 0.00 36.66 2.87
7770 9703 5.545063 TGGGGGAAAAGAGTTTTTGATTC 57.455 39.130 0.00 0.00 36.66 2.52
7891 9824 3.499737 CCCTTCCACGTGCGATGC 61.500 66.667 10.91 0.00 0.00 3.91
7917 10039 4.859304 TCATTTCTGCAAGCAGTTGAAT 57.141 36.364 20.34 15.40 43.96 2.57
7924 10139 2.613474 GCCCATTTCATTTCTGCAAGCA 60.613 45.455 0.00 0.00 0.00 3.91
7925 10140 2.004733 GCCCATTTCATTTCTGCAAGC 58.995 47.619 0.00 0.00 0.00 4.01
7939 10154 1.417517 TCACGATATCTGCTGCCCATT 59.582 47.619 0.34 0.00 0.00 3.16
7956 10171 7.607991 TCTGAATTATTTCCTCTCTTGGTTCAC 59.392 37.037 0.00 0.00 0.00 3.18
8096 10311 3.102204 TGCATCTTGATCTCTCCTGACA 58.898 45.455 0.00 0.00 0.00 3.58
8116 10331 4.968812 TGACATCATTGCTGGTGTATTG 57.031 40.909 0.00 0.00 46.78 1.90
8139 10354 1.118356 ACCATCCCTCATCCTCGAGC 61.118 60.000 6.99 0.00 0.00 5.03
8282 10497 2.615493 CCCTATGGGTATGCGCTTTAGG 60.615 54.545 9.73 9.79 38.25 2.69
8290 10505 0.771127 TCCTTGCCCTATGGGTATGC 59.229 55.000 4.42 0.00 46.51 3.14
8411 10626 2.502947 TGGCATCAGAGTCTGTTAGCAT 59.497 45.455 24.50 9.90 32.61 3.79
8412 10627 1.901833 TGGCATCAGAGTCTGTTAGCA 59.098 47.619 24.50 14.22 32.61 3.49
8479 10708 7.369803 TGCAAATAAAAGTTTCTGCACAAAA 57.630 28.000 9.35 0.00 0.00 2.44
8524 10753 2.687700 TTCTCCAGATCAGCTTGCTC 57.312 50.000 0.00 0.00 0.00 4.26
8711 10952 6.428083 TCTACCTCCAACAAAGTTCATACA 57.572 37.500 0.00 0.00 0.00 2.29
8762 11105 3.181464 TGGACAAGTGACACCGTATTCAA 60.181 43.478 0.84 0.00 0.00 2.69
8777 11120 5.068636 CCCCTCTATCAAATGATGGACAAG 58.931 45.833 5.47 0.00 37.17 3.16
8832 11176 2.027377 CCAGAGAGATGAACCTTGCAGT 60.027 50.000 0.00 0.00 0.00 4.40
8843 11187 3.369147 CGTAAGCAAACACCAGAGAGATG 59.631 47.826 0.00 0.00 0.00 2.90
8848 11192 3.311322 TCAAACGTAAGCAAACACCAGAG 59.689 43.478 0.00 0.00 45.62 3.35
8849 11193 3.271729 TCAAACGTAAGCAAACACCAGA 58.728 40.909 0.00 0.00 45.62 3.86
8850 11194 3.684103 TCAAACGTAAGCAAACACCAG 57.316 42.857 0.00 0.00 45.62 4.00
8851 11195 3.880490 AGATCAAACGTAAGCAAACACCA 59.120 39.130 0.00 0.00 45.62 4.17
8852 11196 4.024387 TCAGATCAAACGTAAGCAAACACC 60.024 41.667 0.00 0.00 45.62 4.16
8853 11197 5.090652 TCAGATCAAACGTAAGCAAACAC 57.909 39.130 0.00 0.00 45.62 3.32
8854 11198 5.940192 ATCAGATCAAACGTAAGCAAACA 57.060 34.783 0.00 0.00 45.62 2.83
8855 11199 8.895932 AAATATCAGATCAAACGTAAGCAAAC 57.104 30.769 0.00 0.00 45.62 2.93
8856 11200 9.982291 GTAAATATCAGATCAAACGTAAGCAAA 57.018 29.630 0.00 0.00 45.62 3.68
8857 11201 9.157104 TGTAAATATCAGATCAAACGTAAGCAA 57.843 29.630 0.00 0.00 45.62 3.91
8858 11202 8.600625 GTGTAAATATCAGATCAAACGTAAGCA 58.399 33.333 0.00 0.00 45.62 3.91
8859 11203 8.818057 AGTGTAAATATCAGATCAAACGTAAGC 58.182 33.333 0.00 0.00 45.62 3.09
8862 11206 9.863845 TCAAGTGTAAATATCAGATCAAACGTA 57.136 29.630 0.00 0.00 0.00 3.57
8863 11207 8.771920 TCAAGTGTAAATATCAGATCAAACGT 57.228 30.769 0.00 0.00 0.00 3.99
8864 11208 7.848051 GCTCAAGTGTAAATATCAGATCAAACG 59.152 37.037 0.00 0.00 0.00 3.60
8865 11209 7.848051 CGCTCAAGTGTAAATATCAGATCAAAC 59.152 37.037 0.00 0.00 0.00 2.93
8866 11210 7.763985 TCGCTCAAGTGTAAATATCAGATCAAA 59.236 33.333 0.00 0.00 0.00 2.69
8867 11211 7.264947 TCGCTCAAGTGTAAATATCAGATCAA 58.735 34.615 0.00 0.00 0.00 2.57
8868 11212 6.805713 TCGCTCAAGTGTAAATATCAGATCA 58.194 36.000 0.00 0.00 0.00 2.92
8869 11213 7.881643 ATCGCTCAAGTGTAAATATCAGATC 57.118 36.000 0.00 0.00 0.00 2.75
8870 11214 9.935241 ATAATCGCTCAAGTGTAAATATCAGAT 57.065 29.630 0.00 0.00 0.00 2.90
8877 11221 8.942338 TTCAGTATAATCGCTCAAGTGTAAAT 57.058 30.769 0.00 0.00 0.00 1.40
8878 11222 8.766000 TTTCAGTATAATCGCTCAAGTGTAAA 57.234 30.769 0.00 0.00 0.00 2.01
8879 11223 8.248253 TCTTTCAGTATAATCGCTCAAGTGTAA 58.752 33.333 0.00 0.00 0.00 2.41
8880 11224 7.768240 TCTTTCAGTATAATCGCTCAAGTGTA 58.232 34.615 0.00 0.00 0.00 2.90
8881 11225 6.631016 TCTTTCAGTATAATCGCTCAAGTGT 58.369 36.000 0.00 0.00 0.00 3.55
8882 11226 7.223582 ACATCTTTCAGTATAATCGCTCAAGTG 59.776 37.037 0.00 0.00 0.00 3.16
8883 11227 7.268586 ACATCTTTCAGTATAATCGCTCAAGT 58.731 34.615 0.00 0.00 0.00 3.16
8884 11228 7.651304 AGACATCTTTCAGTATAATCGCTCAAG 59.349 37.037 0.00 0.00 0.00 3.02
8885 11229 7.492524 AGACATCTTTCAGTATAATCGCTCAA 58.507 34.615 0.00 0.00 0.00 3.02
8886 11230 7.043961 AGACATCTTTCAGTATAATCGCTCA 57.956 36.000 0.00 0.00 0.00 4.26
8887 11231 6.584563 GGAGACATCTTTCAGTATAATCGCTC 59.415 42.308 0.00 0.00 0.00 5.03
8888 11232 6.451393 GGAGACATCTTTCAGTATAATCGCT 58.549 40.000 0.00 0.00 0.00 4.93
8889 11233 5.635700 GGGAGACATCTTTCAGTATAATCGC 59.364 44.000 0.00 0.00 0.00 4.58
8890 11234 6.987386 AGGGAGACATCTTTCAGTATAATCG 58.013 40.000 0.00 0.00 0.00 3.34
8987 11487 1.963338 GCCGGCATATCCAGTCAGC 60.963 63.158 24.80 0.00 34.01 4.26
9002 11502 2.109517 ATATCTGCAGAGGCTGGCCG 62.110 60.000 22.96 0.00 41.91 6.13
9004 11504 0.108207 ACATATCTGCAGAGGCTGGC 59.892 55.000 22.96 0.00 41.91 4.85
9005 11505 2.219458 CAACATATCTGCAGAGGCTGG 58.781 52.381 22.96 11.66 41.91 4.85
9006 11506 1.602851 GCAACATATCTGCAGAGGCTG 59.397 52.381 22.96 19.40 41.91 4.85
9008 11508 1.872313 GAGCAACATATCTGCAGAGGC 59.128 52.381 22.96 16.67 42.48 4.70
9012 11512 4.333913 AGGTAGAGCAACATATCTGCAG 57.666 45.455 7.63 7.63 42.48 4.41
9014 11514 4.446371 ACAAGGTAGAGCAACATATCTGC 58.554 43.478 0.00 0.00 40.24 4.26
9015 11515 5.053145 GGACAAGGTAGAGCAACATATCTG 58.947 45.833 0.00 0.00 0.00 2.90
9017 11517 5.023533 TGGACAAGGTAGAGCAACATATC 57.976 43.478 0.00 0.00 0.00 1.63
9026 11550 2.428890 CCTGTAGCTGGACAAGGTAGAG 59.571 54.545 6.29 6.29 45.39 2.43
9049 11579 5.439828 CGAGTCACAACAATTTCAAATCGA 58.560 37.500 0.00 0.00 0.00 3.59
9085 11617 2.658373 TGAATCTTACGCAACGGCTA 57.342 45.000 0.00 0.00 38.10 3.93
9086 11618 1.732259 CTTGAATCTTACGCAACGGCT 59.268 47.619 0.00 0.00 38.10 5.52
9087 11619 1.202031 CCTTGAATCTTACGCAACGGC 60.202 52.381 0.00 0.00 0.00 5.68
9088 11620 1.202031 GCCTTGAATCTTACGCAACGG 60.202 52.381 0.00 0.00 0.00 4.44
9089 11621 1.202031 GGCCTTGAATCTTACGCAACG 60.202 52.381 0.00 0.00 0.00 4.10
9090 11622 2.084546 AGGCCTTGAATCTTACGCAAC 58.915 47.619 0.00 0.00 0.00 4.17
9091 11623 2.356135 GAGGCCTTGAATCTTACGCAA 58.644 47.619 6.77 0.00 0.00 4.85
9092 11624 1.739035 CGAGGCCTTGAATCTTACGCA 60.739 52.381 15.76 0.00 0.00 5.24
9093 11625 0.931005 CGAGGCCTTGAATCTTACGC 59.069 55.000 15.76 0.00 0.00 4.42
9094 11626 2.579207 TCGAGGCCTTGAATCTTACG 57.421 50.000 21.16 9.34 0.00 3.18
9135 13639 4.379499 GGTTCCTGATTTTAAAGGCTGTCG 60.379 45.833 0.00 0.00 33.25 4.35
9136 13640 4.379499 CGGTTCCTGATTTTAAAGGCTGTC 60.379 45.833 0.00 0.00 33.25 3.51
9137 13641 3.506067 CGGTTCCTGATTTTAAAGGCTGT 59.494 43.478 0.00 0.00 33.25 4.40
9138 13642 3.119495 CCGGTTCCTGATTTTAAAGGCTG 60.119 47.826 0.00 0.00 33.25 4.85
9208 13777 0.173481 AGCAGCGCAGAGAACGATAA 59.827 50.000 11.47 0.00 0.00 1.75
9218 13789 4.528002 CTGTTTGAAGCAGCGCAG 57.472 55.556 11.47 1.31 0.00 5.18
9223 13794 1.154525 CTCGCGCTGTTTGAAGCAG 60.155 57.895 5.56 4.56 43.73 4.24
9224 13795 2.938253 CTCGCGCTGTTTGAAGCA 59.062 55.556 5.56 0.00 43.73 3.91
9250 13821 3.379445 ATCGGTCTTGGTCGCCGT 61.379 61.111 0.00 0.00 45.11 5.68
9478 14094 4.334118 AGCGCATGTGGTGGCAGA 62.334 61.111 11.47 0.00 0.00 4.26
9484 14100 4.334118 TGCTGGAGCGCATGTGGT 62.334 61.111 11.39 11.39 45.83 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.