Multiple sequence alignment - TraesCS6A01G236700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G236700 chr6A 100.000 4275 0 0 1 4275 446090911 446095185 0.000000e+00 7895.0
1 TraesCS6A01G236700 chr6A 94.565 92 4 1 4185 4275 148028078 148027987 1.600000e-29 141.0
2 TraesCS6A01G236700 chr6A 92.929 99 4 3 4178 4275 156170196 156170292 1.600000e-29 141.0
3 TraesCS6A01G236700 chr6A 88.506 87 10 0 2675 2761 18703454 18703540 5.850000e-19 106.0
4 TraesCS6A01G236700 chr6B 88.575 4035 237 100 76 4014 476840243 476844149 0.000000e+00 4691.0
5 TraesCS6A01G236700 chr6B 93.878 98 4 2 4179 4275 183668708 183668804 3.440000e-31 147.0
6 TraesCS6A01G236700 chr6B 88.506 87 10 0 2675 2761 32333634 32333548 5.850000e-19 106.0
7 TraesCS6A01G236700 chr6D 90.132 2959 119 49 702 3572 309341214 309344087 0.000000e+00 3687.0
8 TraesCS6A01G236700 chr6D 92.958 497 29 3 71 566 309340507 309340998 0.000000e+00 719.0
9 TraesCS6A01G236700 chr6D 89.402 368 28 8 3565 3923 309345079 309345444 1.810000e-123 453.0
10 TraesCS6A01G236700 chr6D 98.333 60 0 1 1 59 309340460 309340519 2.100000e-18 104.0
11 TraesCS6A01G236700 chr6D 95.000 40 2 0 635 674 309341115 309341154 3.570000e-06 63.9
12 TraesCS6A01G236700 chr2D 90.667 150 14 0 1393 1542 471896663 471896514 2.610000e-47 200.0
13 TraesCS6A01G236700 chr2D 90.345 145 14 0 1398 1542 471373148 471373004 1.570000e-44 191.0
14 TraesCS6A01G236700 chr2D 92.366 131 10 0 1408 1538 471450868 471450738 2.030000e-43 187.0
15 TraesCS6A01G236700 chr2D 74.860 358 46 30 2673 3005 471372056 471371718 5.810000e-24 122.0
16 TraesCS6A01G236700 chr2D 85.263 95 14 0 2675 2769 471448806 471448712 9.780000e-17 99.0
17 TraesCS6A01G236700 chr2B 91.034 145 13 0 1398 1542 550997445 550997301 3.370000e-46 196.0
18 TraesCS6A01G236700 chr2B 90.345 145 14 0 1398 1542 550720281 550720137 1.570000e-44 191.0
19 TraesCS6A01G236700 chr2B 89.583 144 15 0 1398 1541 550512068 550511925 2.630000e-42 183.0
20 TraesCS6A01G236700 chr2B 85.567 97 14 0 2673 2769 550719331 550719235 7.560000e-18 102.0
21 TraesCS6A01G236700 chr2A 91.034 145 13 0 1398 1542 613274643 613274499 3.370000e-46 196.0
22 TraesCS6A01G236700 chr2A 76.404 356 41 29 2673 3005 613037363 613037028 7.400000e-33 152.0
23 TraesCS6A01G236700 chr2A 93.878 98 4 2 4179 4275 766476239 766476335 3.440000e-31 147.0
24 TraesCS6A01G236700 chr2A 89.286 112 7 5 4167 4275 478955616 478955725 7.460000e-28 135.0
25 TraesCS6A01G236700 chr2A 83.099 142 22 2 1001 1141 613175773 613175633 1.250000e-25 128.0
26 TraesCS6A01G236700 chr2A 84.536 97 15 0 2673 2769 613174190 613174094 3.520000e-16 97.1
27 TraesCS6A01G236700 chr4D 94.624 93 5 0 4183 4275 336527447 336527355 1.240000e-30 145.0
28 TraesCS6A01G236700 chr4D 92.233 103 6 2 4175 4275 423164475 423164373 1.240000e-30 145.0
29 TraesCS6A01G236700 chr3A 93.814 97 4 2 4181 4275 595968973 595969069 1.240000e-30 145.0
30 TraesCS6A01G236700 chr3A 100.000 28 0 0 1041 1068 60297527 60297554 8.000000e-03 52.8
31 TraesCS6A01G236700 chr5A 92.079 101 4 4 4176 4275 491160315 491160218 5.760000e-29 139.0
32 TraesCS6A01G236700 chr5D 92.308 39 3 0 1040 1078 130188036 130188074 5.970000e-04 56.5
33 TraesCS6A01G236700 chr3D 100.000 28 0 0 1041 1068 48070670 48070697 8.000000e-03 52.8
34 TraesCS6A01G236700 chr3B 100.000 28 0 0 1041 1068 75735615 75735642 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G236700 chr6A 446090911 446095185 4274 False 7895.00 7895 100.000 1 4275 1 chr6A.!!$F3 4274
1 TraesCS6A01G236700 chr6B 476840243 476844149 3906 False 4691.00 4691 88.575 76 4014 1 chr6B.!!$F2 3938
2 TraesCS6A01G236700 chr6D 309340460 309345444 4984 False 1005.38 3687 93.165 1 3923 5 chr6D.!!$F1 3922

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 442 0.109458 GGACGATTTGCCGGTTTTCC 60.109 55.0 1.90 0.00 0.00 3.13 F
1172 1297 0.174845 TCCCTCGTCCGCATTTGTAG 59.825 55.0 0.00 0.00 0.00 2.74 F
1173 1298 0.174845 CCCTCGTCCGCATTTGTAGA 59.825 55.0 0.00 0.00 0.00 2.59 F
2395 2572 0.320374 TCATCGGTGGTCCACAACTC 59.680 55.0 23.48 5.18 35.86 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1841 1998 0.107654 CCATCACCGGTCTCCCTTTC 60.108 60.0 2.59 0.00 0.00 2.62 R
2473 2650 0.035458 CTCCTTTTGTGGCTCGGAGT 59.965 55.0 6.90 0.00 37.17 3.85 R
2474 2651 0.321671 TCTCCTTTTGTGGCTCGGAG 59.678 55.0 0.00 0.00 42.00 4.63 R
4151 5387 0.036952 AAGCATCAGTGTCGACCAGG 60.037 55.0 14.12 1.91 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 61 9.367160 TGTGTTGAATGGTGATAGATAGATAGA 57.633 33.333 0.00 0.00 0.00 1.98
91 93 7.720957 AGATAGATAGATAGATAGTGCCTGCTG 59.279 40.741 0.00 0.00 0.00 4.41
93 95 6.726379 AGATAGATAGATAGTGCCTGCTGTA 58.274 40.000 0.00 0.00 0.00 2.74
100 102 1.743252 GTGCCTGCTGTACTCTGCC 60.743 63.158 0.00 0.00 37.65 4.85
102 104 2.586792 CCTGCTGTACTCTGCCCC 59.413 66.667 0.00 0.00 37.65 5.80
105 107 3.775654 GCTGTACTCTGCCCCGCT 61.776 66.667 0.00 0.00 33.40 5.52
122 130 1.387539 GCTCCTCATTCTTGGCTTCC 58.612 55.000 0.00 0.00 0.00 3.46
137 145 2.159517 GGCTTCCATTACAAGCAAGTCG 60.160 50.000 6.74 0.00 46.94 4.18
169 177 1.047801 TTCAAAGGAAAAGGGCCAGC 58.952 50.000 6.18 0.00 0.00 4.85
194 202 7.915923 GCCATAAATAGTTTTGCTTTCTAGACC 59.084 37.037 0.00 0.00 0.00 3.85
195 203 8.122952 CCATAAATAGTTTTGCTTTCTAGACCG 58.877 37.037 0.00 0.00 0.00 4.79
196 204 8.665685 CATAAATAGTTTTGCTTTCTAGACCGT 58.334 33.333 0.00 0.00 0.00 4.83
200 208 2.743636 TTGCTTTCTAGACCGTCCTG 57.256 50.000 0.00 0.00 0.00 3.86
220 228 2.158682 TGGCTGCACTTTAGAACCAAGA 60.159 45.455 0.50 0.00 0.00 3.02
269 296 8.147704 TCAAATGTGTCTTACTGATGTCTTGTA 58.852 33.333 0.00 0.00 0.00 2.41
354 381 7.114247 CCATAACAGTTTGAAAAACATACACCG 59.886 37.037 5.72 0.00 33.91 4.94
367 394 3.191669 CATACACCGGACGAAAGCAATA 58.808 45.455 9.46 0.00 0.00 1.90
368 395 2.396590 ACACCGGACGAAAGCAATAT 57.603 45.000 9.46 0.00 0.00 1.28
369 396 2.706890 ACACCGGACGAAAGCAATATT 58.293 42.857 9.46 0.00 0.00 1.28
396 423 0.992072 AAATCTGTCACGTCATCGCG 59.008 50.000 0.00 0.00 41.18 5.87
415 442 0.109458 GGACGATTTGCCGGTTTTCC 60.109 55.000 1.90 0.00 0.00 3.13
424 451 0.251033 GCCGGTTTTCCCCACTACTT 60.251 55.000 1.90 0.00 36.42 2.24
425 452 1.530323 CCGGTTTTCCCCACTACTTG 58.470 55.000 0.00 0.00 36.42 3.16
488 515 3.518590 CAGCTGGCCTTGATTTTGATTC 58.481 45.455 5.57 0.00 0.00 2.52
544 571 1.302383 ACCTCACTCTCTCACGCTCG 61.302 60.000 0.00 0.00 0.00 5.03
554 581 4.906423 TCTCTCACGCTCGTCTATTTAAC 58.094 43.478 0.00 0.00 0.00 2.01
586 615 2.954989 TGTGCAGAGCAAATGTAAACCA 59.045 40.909 0.00 0.00 41.47 3.67
593 676 6.035327 GCAGAGCAAATGTAAACCATGATTTC 59.965 38.462 0.00 0.00 32.82 2.17
610 693 3.802948 TTTCTCGGAGTAGAAGGCATC 57.197 47.619 4.69 0.00 36.85 3.91
674 762 2.031682 GGCGGCAATTGCAGTAGATTAG 60.032 50.000 30.32 11.10 44.36 1.73
675 763 2.614057 GCGGCAATTGCAGTAGATTAGT 59.386 45.455 30.32 0.00 44.36 2.24
677 765 4.084328 GCGGCAATTGCAGTAGATTAGTAG 60.084 45.833 30.32 7.07 44.36 2.57
678 766 4.084328 CGGCAATTGCAGTAGATTAGTAGC 60.084 45.833 30.32 7.98 44.36 3.58
694 791 9.422681 AGATTAGTAGCTCCTATTGTTTACAGA 57.577 33.333 0.00 0.00 0.00 3.41
699 796 9.740710 AGTAGCTCCTATTGTTTACAGATTTTT 57.259 29.630 0.00 0.00 0.00 1.94
793 918 9.849166 ATAACACGTAATTTGTTTATTTCCCAG 57.151 29.630 0.00 0.00 38.21 4.45
804 929 5.209977 GTTTATTTCCCAGACGACACAAAC 58.790 41.667 0.00 0.00 0.00 2.93
833 958 4.275936 CCCTTTCCATGGCTATAAAACTCG 59.724 45.833 6.96 0.00 0.00 4.18
894 1019 0.914644 TCTCCATCCCAAGGCTTGAG 59.085 55.000 28.18 16.08 0.00 3.02
930 1055 4.719106 GCTGCTGCTGCCTCCTGT 62.719 66.667 19.30 0.00 38.71 4.00
931 1056 2.984623 CTGCTGCTGCCTCCTGTA 59.015 61.111 13.47 0.00 38.71 2.74
932 1057 1.153409 CTGCTGCTGCCTCCTGTAG 60.153 63.158 13.47 0.00 38.71 2.74
933 1058 1.610379 TGCTGCTGCCTCCTGTAGA 60.610 57.895 13.47 0.00 38.71 2.59
934 1059 1.153469 GCTGCTGCCTCCTGTAGAC 60.153 63.158 3.85 0.00 0.00 2.59
935 1060 1.519719 CTGCTGCCTCCTGTAGACC 59.480 63.158 0.00 0.00 0.00 3.85
985 1110 4.090057 GTTCGTCCGCCTGCAAGC 62.090 66.667 0.00 0.00 0.00 4.01
986 1111 4.617520 TTCGTCCGCCTGCAAGCA 62.618 61.111 8.26 0.00 0.00 3.91
987 1112 4.617520 TCGTCCGCCTGCAAGCAA 62.618 61.111 8.26 0.00 0.00 3.91
988 1113 4.093952 CGTCCGCCTGCAAGCAAG 62.094 66.667 8.26 0.00 0.00 4.01
1077 1202 0.388659 CGGAGGAGGATCAGAAGCTG 59.611 60.000 0.00 0.00 36.25 4.24
1169 1294 2.464459 GCTCCCTCGTCCGCATTTG 61.464 63.158 0.00 0.00 0.00 2.32
1172 1297 0.174845 TCCCTCGTCCGCATTTGTAG 59.825 55.000 0.00 0.00 0.00 2.74
1173 1298 0.174845 CCCTCGTCCGCATTTGTAGA 59.825 55.000 0.00 0.00 0.00 2.59
1179 1304 1.804151 GTCCGCATTTGTAGAAGCACA 59.196 47.619 0.00 0.00 0.00 4.57
1180 1305 2.076100 TCCGCATTTGTAGAAGCACAG 58.924 47.619 0.00 0.00 0.00 3.66
1186 1311 4.216257 GCATTTGTAGAAGCACAGAAAGGA 59.784 41.667 0.00 0.00 0.00 3.36
1196 1321 3.950395 AGCACAGAAAGGAGGCATAATTC 59.050 43.478 0.00 0.00 0.00 2.17
1215 1340 3.071874 TCAGGAGAATTCGGTGCATTT 57.928 42.857 0.00 0.00 0.00 2.32
1232 1357 0.688487 TTTGGGTCGAAGATCGGGTT 59.312 50.000 0.00 0.00 39.56 4.11
1273 1398 1.641577 CCCCTCGACTGAATTTCGTC 58.358 55.000 9.76 9.76 37.73 4.20
1290 1415 3.847602 CCTCTCTCCGGCCAGCTG 61.848 72.222 6.78 6.78 0.00 4.24
1305 1430 1.678970 GCTGGTCCGAATTGGCCTT 60.679 57.895 3.32 0.00 37.80 4.35
1331 1456 3.921677 TGTTCGTGGGAGTGATTAGTTC 58.078 45.455 0.00 0.00 0.00 3.01
1392 1517 4.478206 TCTGACTTCTGACCATGATTCC 57.522 45.455 0.00 0.00 0.00 3.01
1540 1679 1.210155 CGGCAACAAGTAAGCAGCC 59.790 57.895 0.00 0.00 38.73 4.85
1541 1680 1.586541 GGCAACAAGTAAGCAGCCC 59.413 57.895 0.00 0.00 36.17 5.19
1542 1681 1.586541 GCAACAAGTAAGCAGCCCC 59.413 57.895 0.00 0.00 0.00 5.80
1543 1682 1.875963 CAACAAGTAAGCAGCCCCG 59.124 57.895 0.00 0.00 0.00 5.73
1544 1683 0.889186 CAACAAGTAAGCAGCCCCGT 60.889 55.000 0.00 0.00 0.00 5.28
1570 1709 5.880332 CAGCACACACCATTTACCTACTTAT 59.120 40.000 0.00 0.00 0.00 1.73
1577 1716 7.011482 CACACCATTTACCTACTTATTCTCTGC 59.989 40.741 0.00 0.00 0.00 4.26
1582 1721 6.852420 TTACCTACTTATTCTCTGCACTGT 57.148 37.500 0.00 0.00 0.00 3.55
1583 1722 7.949690 TTACCTACTTATTCTCTGCACTGTA 57.050 36.000 0.00 0.00 0.00 2.74
1584 1723 6.210287 ACCTACTTATTCTCTGCACTGTAC 57.790 41.667 0.00 0.00 0.00 2.90
1585 1724 5.952947 ACCTACTTATTCTCTGCACTGTACT 59.047 40.000 0.00 0.00 0.00 2.73
1586 1725 6.437793 ACCTACTTATTCTCTGCACTGTACTT 59.562 38.462 0.00 0.00 0.00 2.24
1592 1731 3.914312 TCTCTGCACTGTACTTTACTGC 58.086 45.455 0.00 0.00 32.39 4.40
1637 1776 2.052157 CGAAAGACACTTCTCCACGTC 58.948 52.381 0.00 0.00 0.00 4.34
1650 1789 2.341257 TCCACGTCGTCTGTCTACTAC 58.659 52.381 0.00 0.00 0.00 2.73
1651 1790 2.028658 TCCACGTCGTCTGTCTACTACT 60.029 50.000 0.00 0.00 0.00 2.57
1652 1791 2.348059 CCACGTCGTCTGTCTACTACTC 59.652 54.545 0.00 0.00 0.00 2.59
1653 1792 2.348059 CACGTCGTCTGTCTACTACTCC 59.652 54.545 0.00 0.00 0.00 3.85
1654 1793 2.233431 ACGTCGTCTGTCTACTACTCCT 59.767 50.000 0.00 0.00 0.00 3.69
1655 1794 3.445450 ACGTCGTCTGTCTACTACTCCTA 59.555 47.826 0.00 0.00 0.00 2.94
1709 1848 4.373116 CGCACACACTAGGCGGGT 62.373 66.667 2.78 0.00 46.46 5.28
1721 1860 4.468689 GCGGGTGGTAGCACTCCC 62.469 72.222 23.29 16.46 36.82 4.30
1803 1952 1.659098 CAATCCCGTTCTAGAACACGC 59.341 52.381 29.95 8.36 41.20 5.34
1825 1974 4.935808 GCTAATTCGAGTGAAGGAAGGAAA 59.064 41.667 0.00 0.00 37.57 3.13
1841 1998 2.160205 GGAAAGAAAAGAGGGAACGGG 58.840 52.381 0.00 0.00 0.00 5.28
1848 2005 0.475048 AAGAGGGAACGGGAAAGGGA 60.475 55.000 0.00 0.00 0.00 4.20
1931 2088 2.106683 CGGACGCTCCAAATCCACC 61.107 63.158 5.15 0.00 35.91 4.61
1992 2149 1.667830 CACCTGCTTTTCGCTCCGA 60.668 57.895 0.00 0.00 40.11 4.55
1993 2150 1.021390 CACCTGCTTTTCGCTCCGAT 61.021 55.000 0.00 0.00 40.11 4.18
1994 2151 0.321653 ACCTGCTTTTCGCTCCGATT 60.322 50.000 0.00 0.00 40.11 3.34
2037 2194 0.972883 TATTTGTGGGCTTGGTTGGC 59.027 50.000 0.00 0.00 0.00 4.52
2145 2322 4.689612 TTTGTGAGTATATCCTCTGGCC 57.310 45.455 0.00 0.00 32.50 5.36
2157 2334 2.979676 CTGGCCGTTGCTGCAGAA 60.980 61.111 20.43 2.96 37.74 3.02
2159 2336 2.256461 GGCCGTTGCTGCAGAAAG 59.744 61.111 20.43 10.90 37.74 2.62
2193 2370 5.106555 CCCTGTTGAATTTAGCTGTACAGTG 60.107 44.000 23.44 0.92 31.89 3.66
2201 2378 2.507102 CTGTACAGTGGAGCGGCG 60.507 66.667 15.06 0.51 0.00 6.46
2202 2379 2.986979 TGTACAGTGGAGCGGCGA 60.987 61.111 12.98 0.00 0.00 5.54
2203 2380 2.202623 GTACAGTGGAGCGGCGAG 60.203 66.667 12.98 0.00 0.00 5.03
2204 2381 2.360726 TACAGTGGAGCGGCGAGA 60.361 61.111 12.98 0.00 0.00 4.04
2244 2421 4.162690 GGACCAATCCGCGCTCCT 62.163 66.667 5.56 0.00 34.48 3.69
2245 2422 2.586357 GACCAATCCGCGCTCCTC 60.586 66.667 5.56 0.00 0.00 3.71
2258 2435 1.634702 GCTCCTCACTTGCGAGTTAG 58.365 55.000 3.02 6.05 32.54 2.34
2259 2436 1.067495 GCTCCTCACTTGCGAGTTAGT 60.067 52.381 13.18 0.00 32.54 2.24
2260 2437 2.610727 GCTCCTCACTTGCGAGTTAGTT 60.611 50.000 13.18 0.00 32.54 2.24
2287 2464 2.892425 GCTGCCTTGACGATCCCG 60.892 66.667 0.00 0.00 42.50 5.14
2300 2477 1.379443 ATCCCGACTGGCACGTAGA 60.379 57.895 0.00 0.00 0.00 2.59
2301 2478 0.968901 ATCCCGACTGGCACGTAGAA 60.969 55.000 0.00 0.00 0.00 2.10
2302 2479 1.153823 CCCGACTGGCACGTAGAAG 60.154 63.158 0.00 0.00 0.00 2.85
2378 2555 5.769662 CCCGAAAAATATCCAAGGATGATCA 59.230 40.000 11.82 0.00 36.17 2.92
2379 2556 6.435277 CCCGAAAAATATCCAAGGATGATCAT 59.565 38.462 8.25 8.25 36.17 2.45
2380 2557 7.362401 CCCGAAAAATATCCAAGGATGATCATC 60.362 40.741 24.90 24.90 36.17 2.92
2392 2569 0.980423 TGATCATCGGTGGTCCACAA 59.020 50.000 23.48 11.29 34.43 3.33
2393 2570 1.338674 TGATCATCGGTGGTCCACAAC 60.339 52.381 23.48 6.28 34.43 3.32
2394 2571 0.984230 ATCATCGGTGGTCCACAACT 59.016 50.000 23.48 4.07 35.86 3.16
2395 2572 0.320374 TCATCGGTGGTCCACAACTC 59.680 55.000 23.48 5.18 35.86 3.01
2396 2573 0.673644 CATCGGTGGTCCACAACTCC 60.674 60.000 23.48 4.86 35.86 3.85
2397 2574 1.125093 ATCGGTGGTCCACAACTCCA 61.125 55.000 23.48 0.70 35.86 3.86
2461 2638 7.358830 CCAAGTGACACATTTTGTTTTGTTTT 58.641 30.769 8.59 0.00 39.17 2.43
2462 2639 7.323177 CCAAGTGACACATTTTGTTTTGTTTTG 59.677 33.333 8.59 0.00 39.17 2.44
2463 2640 6.369799 AGTGACACATTTTGTTTTGTTTTGC 58.630 32.000 8.59 0.00 39.17 3.68
2464 2641 6.204495 AGTGACACATTTTGTTTTGTTTTGCT 59.796 30.769 8.59 0.00 39.17 3.91
2466 2643 7.378194 GTGACACATTTTGTTTTGTTTTGCTTT 59.622 29.630 0.00 0.00 39.17 3.51
2467 2644 7.377928 TGACACATTTTGTTTTGTTTTGCTTTG 59.622 29.630 0.00 0.00 39.17 2.77
2470 2647 8.538039 CACATTTTGTTTTGTTTTGCTTTGTTT 58.462 25.926 0.00 0.00 0.00 2.83
2471 2648 9.736023 ACATTTTGTTTTGTTTTGCTTTGTTTA 57.264 22.222 0.00 0.00 0.00 2.01
2510 2687 5.993106 AGGAGAAAAGAACGAGAAACTTG 57.007 39.130 0.00 0.00 0.00 3.16
2512 2689 5.755861 AGGAGAAAAGAACGAGAAACTTGAG 59.244 40.000 0.00 0.00 0.00 3.02
2518 2695 3.810386 AGAACGAGAAACTTGAGAAAGGC 59.190 43.478 0.00 0.00 0.00 4.35
2538 2715 2.223180 GCCGAAAGAAACGTCAAGTTGT 60.223 45.455 2.11 0.00 43.37 3.32
2587 2778 1.578583 CGACCGACAGAAACCAAAGT 58.421 50.000 0.00 0.00 0.00 2.66
2620 2817 6.966021 TCTGACATAAACCAAAGTTAAGTGC 58.034 36.000 0.00 0.00 34.19 4.40
2746 2943 5.105837 GGTGAAGAACTACTGGAACTCGTAT 60.106 44.000 0.00 0.00 0.00 3.06
2939 3160 2.034532 TGACCGTGACCGAGCCTA 59.965 61.111 0.00 0.00 35.63 3.93
2986 3207 1.361668 CTCCCAAGGTGATGTTCGCG 61.362 60.000 0.00 0.00 0.00 5.87
3089 3310 2.026157 GCGGCGATCATCGTCAGA 59.974 61.111 13.02 0.00 46.15 3.27
3091 3312 1.340657 GCGGCGATCATCGTCAGATC 61.341 60.000 13.02 0.00 46.15 2.75
3093 3314 1.413382 GGCGATCATCGTCAGATCAC 58.587 55.000 6.81 0.00 45.01 3.06
3284 3505 0.596083 CCTCAACTAGAGCATCGCCG 60.596 60.000 0.00 0.00 43.31 6.46
3285 3506 1.211818 CTCAACTAGAGCATCGCCGC 61.212 60.000 0.00 0.00 42.67 6.53
3286 3507 2.107141 AACTAGAGCATCGCCGCC 59.893 61.111 0.00 0.00 42.67 6.13
3302 3523 0.391793 CGCCAAGGGAGAAGAAGGAC 60.392 60.000 0.00 0.00 0.00 3.85
3388 3611 6.542852 CAGTGTAAATTATGGCCGTATATGC 58.457 40.000 5.26 0.00 0.00 3.14
3390 3613 6.712998 AGTGTAAATTATGGCCGTATATGCAA 59.287 34.615 5.26 0.00 0.00 4.08
3391 3614 7.393234 AGTGTAAATTATGGCCGTATATGCAAT 59.607 33.333 5.26 1.89 0.00 3.56
3392 3615 7.484641 GTGTAAATTATGGCCGTATATGCAATG 59.515 37.037 5.26 0.00 0.00 2.82
3393 3616 6.588719 AAATTATGGCCGTATATGCAATGT 57.411 33.333 5.26 0.00 0.00 2.71
3413 3636 8.323854 GCAATGTATGTATGTATAGAGCAATCG 58.676 37.037 0.00 0.00 0.00 3.34
3463 3686 1.039856 AATGCTGTCCGCTTTGGTTT 58.960 45.000 0.00 0.00 40.11 3.27
3466 3689 1.734388 GCTGTCCGCTTTGGTTTGGT 61.734 55.000 0.00 0.00 39.52 3.67
3467 3690 0.744281 CTGTCCGCTTTGGTTTGGTT 59.256 50.000 0.00 0.00 39.52 3.67
3468 3691 0.741915 TGTCCGCTTTGGTTTGGTTC 59.258 50.000 0.00 0.00 39.52 3.62
3469 3692 0.317519 GTCCGCTTTGGTTTGGTTCG 60.318 55.000 0.00 0.00 39.52 3.95
3470 3693 1.007849 CCGCTTTGGTTTGGTTCGG 60.008 57.895 0.00 0.00 0.00 4.30
3471 3694 1.448922 CCGCTTTGGTTTGGTTCGGA 61.449 55.000 0.00 0.00 37.79 4.55
3472 3695 0.040425 CGCTTTGGTTTGGTTCGGAG 60.040 55.000 0.00 0.00 0.00 4.63
3473 3696 1.314730 GCTTTGGTTTGGTTCGGAGA 58.685 50.000 0.00 0.00 0.00 3.71
3474 3697 1.266989 GCTTTGGTTTGGTTCGGAGAG 59.733 52.381 0.00 0.00 38.43 3.20
3475 3698 1.266989 CTTTGGTTTGGTTCGGAGAGC 59.733 52.381 0.00 0.00 38.43 4.09
3480 3703 0.320771 TTTGGTTCGGAGAGCAGAGC 60.321 55.000 0.00 0.00 40.41 4.09
3542 3766 7.764695 ATGCACATGTTGTTGATTTGATATG 57.235 32.000 0.00 0.00 0.00 1.78
3546 3770 6.474427 CACATGTTGTTGATTTGATATGCTCC 59.526 38.462 0.00 0.00 0.00 4.70
3547 3771 6.379133 ACATGTTGTTGATTTGATATGCTCCT 59.621 34.615 0.00 0.00 0.00 3.69
3548 3772 7.557358 ACATGTTGTTGATTTGATATGCTCCTA 59.443 33.333 0.00 0.00 0.00 2.94
3584 4807 6.158169 AGGGTTAATATTATCTTCCCGGATCC 59.842 42.308 0.73 0.00 38.52 3.36
3608 4831 4.864806 CGCTTTAATAGAGCACTGTGAAGA 59.135 41.667 12.86 0.00 40.13 2.87
3612 4835 7.279758 GCTTTAATAGAGCACTGTGAAGAGAAT 59.720 37.037 12.86 0.00 39.89 2.40
3615 4838 3.072944 AGAGCACTGTGAAGAGAATTGC 58.927 45.455 12.86 0.00 0.00 3.56
3623 4846 2.163211 GTGAAGAGAATTGCCAAGCTCC 59.837 50.000 6.51 0.00 0.00 4.70
3751 4974 6.252967 TGTTGTAAGAAATTCATGCATCGT 57.747 33.333 0.00 0.00 0.00 3.73
3761 4984 1.134401 TCATGCATCGTCTTTCCTCCC 60.134 52.381 0.00 0.00 0.00 4.30
3838 5061 4.808649 GGTCGACCGGCTAAGAAG 57.191 61.111 20.85 0.00 0.00 2.85
3849 5072 0.108756 GCTAAGAAGCTTCGGTCGGT 60.109 55.000 20.43 0.00 45.85 4.69
3850 5073 1.910688 CTAAGAAGCTTCGGTCGGTC 58.089 55.000 20.43 0.00 0.00 4.79
3851 5074 0.169672 TAAGAAGCTTCGGTCGGTCG 59.830 55.000 20.43 0.00 0.00 4.79
3852 5075 1.521450 AAGAAGCTTCGGTCGGTCGA 61.521 55.000 20.43 0.00 37.38 4.20
3884 5115 2.520549 AGGCTCTCTCCCCTACATAAGT 59.479 50.000 0.00 0.00 0.00 2.24
3902 5133 6.818644 ACATAAGTCATGTGTTTTATCGAGCT 59.181 34.615 0.00 0.00 46.41 4.09
3904 5135 3.859961 AGTCATGTGTTTTATCGAGCTCG 59.140 43.478 30.03 30.03 41.45 5.03
3923 5154 0.523519 GCTTGCCGCTTAAGCTTTCT 59.476 50.000 24.33 0.00 45.34 2.52
3925 5156 2.079925 CTTGCCGCTTAAGCTTTCTCT 58.920 47.619 24.33 0.00 39.32 3.10
3926 5157 1.726853 TGCCGCTTAAGCTTTCTCTC 58.273 50.000 24.33 6.67 39.32 3.20
3927 5158 0.647925 GCCGCTTAAGCTTTCTCTCG 59.352 55.000 24.33 6.80 39.32 4.04
3928 5159 1.997669 CCGCTTAAGCTTTCTCTCGT 58.002 50.000 24.33 0.00 39.32 4.18
3931 5162 2.026978 CGCTTAAGCTTTCTCTCGTTCG 59.973 50.000 24.33 1.04 39.32 3.95
3966 5202 1.339438 ACTGCCGCTCATTTCACATCT 60.339 47.619 0.00 0.00 0.00 2.90
3987 5223 2.189191 TTTCCTCTGCTGCCGCATCT 62.189 55.000 2.34 0.00 46.74 2.90
3992 5228 1.523032 CTGCTGCCGCATCTCATCA 60.523 57.895 2.34 0.00 46.74 3.07
4008 5244 3.393106 CACCCAGCATTTGGCCCC 61.393 66.667 0.00 0.00 46.32 5.80
4014 5250 3.810896 GCATTTGGCCCCGTCGAC 61.811 66.667 5.18 5.18 36.11 4.20
4015 5251 3.131478 CATTTGGCCCCGTCGACC 61.131 66.667 10.58 0.00 0.00 4.79
4016 5252 3.327404 ATTTGGCCCCGTCGACCT 61.327 61.111 10.58 0.00 0.00 3.85
4017 5253 1.991167 ATTTGGCCCCGTCGACCTA 60.991 57.895 10.58 0.00 0.00 3.08
4018 5254 1.555477 ATTTGGCCCCGTCGACCTAA 61.555 55.000 10.58 0.00 0.00 2.69
4019 5255 1.766625 TTTGGCCCCGTCGACCTAAA 61.767 55.000 10.58 3.54 0.00 1.85
4020 5256 2.125391 GGCCCCGTCGACCTAAAC 60.125 66.667 10.58 0.00 0.00 2.01
4021 5257 2.658422 GCCCCGTCGACCTAAACA 59.342 61.111 10.58 0.00 0.00 2.83
4022 5258 1.447314 GCCCCGTCGACCTAAACAG 60.447 63.158 10.58 0.00 0.00 3.16
4023 5259 1.217244 CCCCGTCGACCTAAACAGG 59.783 63.158 10.58 3.06 0.00 4.00
4024 5260 1.447314 CCCGTCGACCTAAACAGGC 60.447 63.158 10.58 0.00 0.00 4.85
4025 5261 1.290955 CCGTCGACCTAAACAGGCA 59.709 57.895 10.58 0.00 0.00 4.75
4026 5262 1.012486 CCGTCGACCTAAACAGGCAC 61.012 60.000 10.58 0.00 0.00 5.01
4027 5263 0.038526 CGTCGACCTAAACAGGCACT 60.039 55.000 10.58 0.00 43.88 4.40
4028 5264 1.711206 GTCGACCTAAACAGGCACTC 58.289 55.000 3.51 0.00 34.60 3.51
4029 5265 1.272769 GTCGACCTAAACAGGCACTCT 59.727 52.381 3.51 0.00 34.60 3.24
4030 5266 1.544691 TCGACCTAAACAGGCACTCTC 59.455 52.381 0.00 0.00 34.60 3.20
4031 5267 1.404315 CGACCTAAACAGGCACTCTCC 60.404 57.143 0.00 0.00 34.60 3.71
4032 5268 0.984995 ACCTAAACAGGCACTCTCCC 59.015 55.000 0.00 0.00 34.60 4.30
4033 5269 1.280457 CCTAAACAGGCACTCTCCCT 58.720 55.000 0.00 0.00 34.60 4.20
4034 5270 1.630878 CCTAAACAGGCACTCTCCCTT 59.369 52.381 0.00 0.00 34.60 3.95
4035 5271 2.040412 CCTAAACAGGCACTCTCCCTTT 59.960 50.000 0.00 0.00 34.60 3.11
4036 5272 3.263425 CCTAAACAGGCACTCTCCCTTTA 59.737 47.826 0.00 0.00 34.60 1.85
4037 5273 3.876309 AAACAGGCACTCTCCCTTTAA 57.124 42.857 0.00 0.00 34.60 1.52
4038 5274 2.861147 ACAGGCACTCTCCCTTTAAC 57.139 50.000 0.00 0.00 34.60 2.01
4039 5275 1.351350 ACAGGCACTCTCCCTTTAACC 59.649 52.381 0.00 0.00 34.60 2.85
4040 5276 0.992695 AGGCACTCTCCCTTTAACCC 59.007 55.000 0.00 0.00 0.00 4.11
4041 5277 0.992695 GGCACTCTCCCTTTAACCCT 59.007 55.000 0.00 0.00 0.00 4.34
4042 5278 2.193993 GGCACTCTCCCTTTAACCCTA 58.806 52.381 0.00 0.00 0.00 3.53
4043 5279 2.778270 GGCACTCTCCCTTTAACCCTAT 59.222 50.000 0.00 0.00 0.00 2.57
4044 5280 3.181453 GGCACTCTCCCTTTAACCCTATC 60.181 52.174 0.00 0.00 0.00 2.08
4045 5281 3.181453 GCACTCTCCCTTTAACCCTATCC 60.181 52.174 0.00 0.00 0.00 2.59
4046 5282 3.391626 CACTCTCCCTTTAACCCTATCCC 59.608 52.174 0.00 0.00 0.00 3.85
4047 5283 3.014807 ACTCTCCCTTTAACCCTATCCCA 59.985 47.826 0.00 0.00 0.00 4.37
4048 5284 4.045022 CTCTCCCTTTAACCCTATCCCAA 58.955 47.826 0.00 0.00 0.00 4.12
4049 5285 4.450348 TCTCCCTTTAACCCTATCCCAAA 58.550 43.478 0.00 0.00 0.00 3.28
4050 5286 5.050685 TCTCCCTTTAACCCTATCCCAAAT 58.949 41.667 0.00 0.00 0.00 2.32
4051 5287 5.133830 TCTCCCTTTAACCCTATCCCAAATC 59.866 44.000 0.00 0.00 0.00 2.17
4052 5288 4.796816 TCCCTTTAACCCTATCCCAAATCA 59.203 41.667 0.00 0.00 0.00 2.57
4053 5289 5.103686 TCCCTTTAACCCTATCCCAAATCAG 60.104 44.000 0.00 0.00 0.00 2.90
4054 5290 5.103686 CCCTTTAACCCTATCCCAAATCAGA 60.104 44.000 0.00 0.00 0.00 3.27
4055 5291 6.412024 CCCTTTAACCCTATCCCAAATCAGAT 60.412 42.308 0.00 0.00 0.00 2.90
4056 5292 7.202279 CCCTTTAACCCTATCCCAAATCAGATA 60.202 40.741 0.00 0.00 0.00 1.98
4057 5293 8.394040 CCTTTAACCCTATCCCAAATCAGATAT 58.606 37.037 0.00 0.00 0.00 1.63
4058 5294 9.236006 CTTTAACCCTATCCCAAATCAGATATG 57.764 37.037 0.00 0.00 0.00 1.78
4059 5295 5.786121 ACCCTATCCCAAATCAGATATGG 57.214 43.478 0.00 0.00 37.01 2.74
4060 5296 4.018050 ACCCTATCCCAAATCAGATATGGC 60.018 45.833 0.00 0.00 35.37 4.40
4061 5297 4.229123 CCCTATCCCAAATCAGATATGGCT 59.771 45.833 0.00 0.00 32.71 4.75
4062 5298 5.191426 CCTATCCCAAATCAGATATGGCTG 58.809 45.833 0.00 0.00 37.24 4.85
4063 5299 2.867624 TCCCAAATCAGATATGGCTGC 58.132 47.619 0.00 0.00 35.86 5.25
4064 5300 2.175284 TCCCAAATCAGATATGGCTGCA 59.825 45.455 0.50 0.00 35.86 4.41
4065 5301 3.162666 CCCAAATCAGATATGGCTGCAT 58.837 45.455 0.50 0.00 35.86 3.96
4066 5302 3.056821 CCCAAATCAGATATGGCTGCATG 60.057 47.826 0.50 0.00 35.86 4.06
4067 5303 3.575630 CAAATCAGATATGGCTGCATGC 58.424 45.455 11.82 11.82 41.94 4.06
4068 5304 2.881111 ATCAGATATGGCTGCATGCT 57.119 45.000 20.33 0.00 42.39 3.79
4069 5305 1.892209 TCAGATATGGCTGCATGCTG 58.108 50.000 20.33 19.80 42.39 4.41
4070 5306 1.418637 TCAGATATGGCTGCATGCTGA 59.581 47.619 26.71 12.10 42.39 4.26
4071 5307 1.807142 CAGATATGGCTGCATGCTGAG 59.193 52.381 26.71 14.30 42.39 3.35
4072 5308 1.697982 AGATATGGCTGCATGCTGAGA 59.302 47.619 26.71 12.74 42.39 3.27
4073 5309 2.077627 GATATGGCTGCATGCTGAGAG 58.922 52.381 26.71 13.20 42.39 3.20
4074 5310 0.108019 TATGGCTGCATGCTGAGAGG 59.892 55.000 26.71 7.68 42.39 3.69
4075 5311 3.210528 GGCTGCATGCTGAGAGGC 61.211 66.667 26.71 19.43 42.39 4.70
4076 5312 2.437895 GCTGCATGCTGAGAGGCA 60.438 61.111 26.71 0.00 46.63 4.75
4077 5313 2.044555 GCTGCATGCTGAGAGGCAA 61.045 57.895 26.71 0.00 45.68 4.52
4078 5314 1.994507 GCTGCATGCTGAGAGGCAAG 61.995 60.000 26.71 9.91 45.68 4.01
4079 5315 2.799371 GCATGCTGAGAGGCAAGC 59.201 61.111 11.37 1.24 46.59 4.01
4080 5316 2.772691 GCATGCTGAGAGGCAAGCC 61.773 63.158 11.37 2.02 46.77 4.35
4081 5317 1.378119 CATGCTGAGAGGCAAGCCA 60.378 57.895 14.40 0.00 45.68 4.75
4082 5318 1.077644 ATGCTGAGAGGCAAGCCAG 60.078 57.895 14.40 2.78 45.68 4.85
4083 5319 1.559965 ATGCTGAGAGGCAAGCCAGA 61.560 55.000 14.40 0.00 45.68 3.86
4084 5320 1.744741 GCTGAGAGGCAAGCCAGAC 60.745 63.158 14.40 4.48 38.92 3.51
4085 5321 1.675801 CTGAGAGGCAAGCCAGACA 59.324 57.895 14.40 8.61 38.92 3.41
4086 5322 0.391395 CTGAGAGGCAAGCCAGACAG 60.391 60.000 14.40 13.89 38.92 3.51
4087 5323 1.123861 TGAGAGGCAAGCCAGACAGT 61.124 55.000 14.40 0.00 38.92 3.55
4088 5324 0.673022 GAGAGGCAAGCCAGACAGTG 60.673 60.000 14.40 0.00 38.92 3.66
4089 5325 1.072159 GAGGCAAGCCAGACAGTGT 59.928 57.895 14.40 0.00 38.92 3.55
4090 5326 1.228063 AGGCAAGCCAGACAGTGTG 60.228 57.895 14.40 0.00 38.92 3.82
4091 5327 1.526917 GGCAAGCCAGACAGTGTGT 60.527 57.895 0.00 0.00 35.81 3.72
4092 5328 1.650912 GCAAGCCAGACAGTGTGTG 59.349 57.895 13.34 13.34 0.00 3.82
4094 5330 1.149174 AAGCCAGACAGTGTGTGGG 59.851 57.895 33.60 19.23 45.54 4.61
4095 5331 2.965716 AAGCCAGACAGTGTGTGGGC 62.966 60.000 33.60 26.05 45.54 5.36
4096 5332 2.510411 CCAGACAGTGTGTGGGCA 59.490 61.111 27.80 0.00 42.33 5.36
4097 5333 1.073722 CCAGACAGTGTGTGGGCAT 59.926 57.895 27.80 0.00 42.33 4.40
4098 5334 0.957395 CCAGACAGTGTGTGGGCATC 60.957 60.000 27.80 0.00 42.33 3.91
4099 5335 0.250424 CAGACAGTGTGTGGGCATCA 60.250 55.000 12.50 0.00 0.00 3.07
4100 5336 0.694771 AGACAGTGTGTGGGCATCAT 59.305 50.000 0.00 0.00 0.00 2.45
4101 5337 1.908619 AGACAGTGTGTGGGCATCATA 59.091 47.619 0.00 0.00 0.00 2.15
4102 5338 2.009774 GACAGTGTGTGGGCATCATAC 58.990 52.381 0.00 0.00 37.89 2.39
4103 5339 1.630369 ACAGTGTGTGGGCATCATACT 59.370 47.619 0.00 5.15 38.18 2.12
4104 5340 2.040278 ACAGTGTGTGGGCATCATACTT 59.960 45.455 0.00 0.21 38.18 2.24
4105 5341 2.421073 CAGTGTGTGGGCATCATACTTG 59.579 50.000 7.54 3.67 38.18 3.16
4106 5342 1.745087 GTGTGTGGGCATCATACTTGG 59.255 52.381 7.46 0.00 38.18 3.61
4107 5343 1.340893 TGTGTGGGCATCATACTTGGG 60.341 52.381 7.46 0.00 38.18 4.12
4108 5344 1.064758 GTGTGGGCATCATACTTGGGA 60.065 52.381 0.00 0.00 35.05 4.37
4109 5345 1.212688 TGTGGGCATCATACTTGGGAG 59.787 52.381 0.00 0.00 0.00 4.30
4110 5346 0.846015 TGGGCATCATACTTGGGAGG 59.154 55.000 0.00 0.00 0.00 4.30
4111 5347 0.846693 GGGCATCATACTTGGGAGGT 59.153 55.000 0.00 0.00 0.00 3.85
4112 5348 1.202818 GGGCATCATACTTGGGAGGTC 60.203 57.143 0.00 0.00 0.00 3.85
4113 5349 1.541233 GGCATCATACTTGGGAGGTCG 60.541 57.143 0.00 0.00 0.00 4.79
4114 5350 1.412710 GCATCATACTTGGGAGGTCGA 59.587 52.381 0.00 0.00 0.00 4.20
4115 5351 2.546795 GCATCATACTTGGGAGGTCGAG 60.547 54.545 0.00 0.00 0.00 4.04
4116 5352 1.776662 TCATACTTGGGAGGTCGAGG 58.223 55.000 0.00 0.00 0.00 4.63
4117 5353 0.753262 CATACTTGGGAGGTCGAGGG 59.247 60.000 0.00 0.00 0.00 4.30
4118 5354 0.398664 ATACTTGGGAGGTCGAGGGG 60.399 60.000 0.00 0.00 0.00 4.79
4119 5355 2.525284 TACTTGGGAGGTCGAGGGGG 62.525 65.000 0.00 0.00 0.00 5.40
4133 5369 3.241520 GGGGGCTATGAGGGTGAC 58.758 66.667 0.00 0.00 0.00 3.67
4134 5370 2.808206 GGGGGCTATGAGGGTGACG 61.808 68.421 0.00 0.00 0.00 4.35
4135 5371 2.109181 GGGCTATGAGGGTGACGC 59.891 66.667 0.00 0.00 0.00 5.19
4136 5372 2.109181 GGCTATGAGGGTGACGCC 59.891 66.667 0.00 0.00 0.00 5.68
4137 5373 2.731571 GGCTATGAGGGTGACGCCA 61.732 63.158 7.48 0.00 39.65 5.69
4138 5374 1.447643 GCTATGAGGGTGACGCCAT 59.552 57.895 7.48 0.00 39.65 4.40
4151 5387 3.395669 GCCATCGCGTACTGGAAC 58.604 61.111 22.86 7.74 34.24 3.62
4152 5388 2.171725 GCCATCGCGTACTGGAACC 61.172 63.158 22.86 7.18 34.24 3.62
4153 5389 1.515954 CCATCGCGTACTGGAACCT 59.484 57.895 16.52 0.00 34.24 3.50
4154 5390 0.806102 CCATCGCGTACTGGAACCTG 60.806 60.000 16.52 0.00 34.24 4.00
4155 5391 0.806102 CATCGCGTACTGGAACCTGG 60.806 60.000 5.77 0.00 0.00 4.45
4156 5392 1.255667 ATCGCGTACTGGAACCTGGT 61.256 55.000 5.77 0.00 0.00 4.00
4157 5393 1.445582 CGCGTACTGGAACCTGGTC 60.446 63.158 0.00 0.00 0.00 4.02
4158 5394 1.445582 GCGTACTGGAACCTGGTCG 60.446 63.158 0.00 0.00 0.00 4.79
4159 5395 1.870055 GCGTACTGGAACCTGGTCGA 61.870 60.000 0.00 0.00 0.00 4.20
4160 5396 0.109412 CGTACTGGAACCTGGTCGAC 60.109 60.000 7.13 7.13 0.00 4.20
4161 5397 0.963962 GTACTGGAACCTGGTCGACA 59.036 55.000 18.91 2.63 0.00 4.35
4162 5398 0.963962 TACTGGAACCTGGTCGACAC 59.036 55.000 18.91 7.49 0.00 3.67
4163 5399 0.759436 ACTGGAACCTGGTCGACACT 60.759 55.000 18.91 0.00 0.00 3.55
4164 5400 0.319900 CTGGAACCTGGTCGACACTG 60.320 60.000 18.91 10.41 0.00 3.66
4165 5401 0.757561 TGGAACCTGGTCGACACTGA 60.758 55.000 18.91 0.00 0.00 3.41
4166 5402 0.608640 GGAACCTGGTCGACACTGAT 59.391 55.000 18.91 0.00 0.00 2.90
4167 5403 1.673033 GGAACCTGGTCGACACTGATG 60.673 57.143 18.91 1.69 0.00 3.07
4168 5404 0.320771 AACCTGGTCGACACTGATGC 60.321 55.000 18.91 0.00 0.00 3.91
4169 5405 1.188219 ACCTGGTCGACACTGATGCT 61.188 55.000 18.91 0.00 0.00 3.79
4170 5406 0.036952 CCTGGTCGACACTGATGCTT 60.037 55.000 18.91 0.00 0.00 3.91
4171 5407 1.609061 CCTGGTCGACACTGATGCTTT 60.609 52.381 18.91 0.00 0.00 3.51
4172 5408 2.146342 CTGGTCGACACTGATGCTTTT 58.854 47.619 18.91 0.00 0.00 2.27
4173 5409 2.549754 CTGGTCGACACTGATGCTTTTT 59.450 45.455 18.91 0.00 0.00 1.94
4174 5410 2.548057 TGGTCGACACTGATGCTTTTTC 59.452 45.455 18.91 0.00 0.00 2.29
4175 5411 2.548057 GGTCGACACTGATGCTTTTTCA 59.452 45.455 18.91 0.00 0.00 2.69
4176 5412 3.545633 GTCGACACTGATGCTTTTTCAC 58.454 45.455 11.55 0.00 0.00 3.18
4177 5413 2.548057 TCGACACTGATGCTTTTTCACC 59.452 45.455 0.00 0.00 0.00 4.02
4178 5414 2.662791 CGACACTGATGCTTTTTCACCG 60.663 50.000 0.00 0.00 0.00 4.94
4179 5415 2.548057 GACACTGATGCTTTTTCACCGA 59.452 45.455 0.00 0.00 0.00 4.69
4180 5416 3.149196 ACACTGATGCTTTTTCACCGAT 58.851 40.909 0.00 0.00 0.00 4.18
4181 5417 3.058016 ACACTGATGCTTTTTCACCGATG 60.058 43.478 0.00 0.00 0.00 3.84
4182 5418 2.489329 ACTGATGCTTTTTCACCGATGG 59.511 45.455 0.00 0.00 0.00 3.51
4183 5419 1.818060 TGATGCTTTTTCACCGATGGG 59.182 47.619 0.00 0.00 40.11 4.00
4184 5420 2.091541 GATGCTTTTTCACCGATGGGA 58.908 47.619 0.00 0.00 36.97 4.37
4185 5421 2.214376 TGCTTTTTCACCGATGGGAT 57.786 45.000 0.00 0.00 36.97 3.85
4186 5422 1.818060 TGCTTTTTCACCGATGGGATG 59.182 47.619 0.00 0.00 36.97 3.51
4187 5423 1.134946 GCTTTTTCACCGATGGGATGG 59.865 52.381 0.00 0.00 36.97 3.51
4188 5424 2.446435 CTTTTTCACCGATGGGATGGT 58.554 47.619 0.00 0.00 39.66 3.55
4189 5425 2.122783 TTTTCACCGATGGGATGGTC 57.877 50.000 0.00 0.00 35.96 4.02
4190 5426 0.107897 TTTCACCGATGGGATGGTCG 60.108 55.000 0.00 0.00 35.96 4.79
4191 5427 0.973496 TTCACCGATGGGATGGTCGA 60.973 55.000 0.00 0.00 40.11 4.20
4192 5428 1.227263 CACCGATGGGATGGTCGAC 60.227 63.158 7.13 7.13 40.11 4.20
4193 5429 1.381327 ACCGATGGGATGGTCGACT 60.381 57.895 16.46 0.00 40.11 4.18
4194 5430 0.976073 ACCGATGGGATGGTCGACTT 60.976 55.000 16.46 3.14 40.11 3.01
4195 5431 0.530650 CCGATGGGATGGTCGACTTG 60.531 60.000 16.46 0.00 40.11 3.16
4196 5432 0.459899 CGATGGGATGGTCGACTTGA 59.540 55.000 16.46 0.00 40.11 3.02
4197 5433 1.134818 CGATGGGATGGTCGACTTGAA 60.135 52.381 16.46 0.00 40.11 2.69
4198 5434 2.555199 GATGGGATGGTCGACTTGAAG 58.445 52.381 16.46 0.00 0.00 3.02
4199 5435 0.613260 TGGGATGGTCGACTTGAAGG 59.387 55.000 16.46 0.00 0.00 3.46
4200 5436 0.902531 GGGATGGTCGACTTGAAGGA 59.097 55.000 16.46 0.00 0.00 3.36
4201 5437 1.278127 GGGATGGTCGACTTGAAGGAA 59.722 52.381 16.46 0.00 0.00 3.36
4202 5438 2.290071 GGGATGGTCGACTTGAAGGAAA 60.290 50.000 16.46 0.00 0.00 3.13
4203 5439 3.610911 GGATGGTCGACTTGAAGGAAAT 58.389 45.455 16.46 0.00 0.00 2.17
4204 5440 4.383770 GGGATGGTCGACTTGAAGGAAATA 60.384 45.833 16.46 0.00 0.00 1.40
4205 5441 5.368989 GGATGGTCGACTTGAAGGAAATAT 58.631 41.667 16.46 0.00 0.00 1.28
4206 5442 5.237344 GGATGGTCGACTTGAAGGAAATATG 59.763 44.000 16.46 0.00 0.00 1.78
4207 5443 3.938963 TGGTCGACTTGAAGGAAATATGC 59.061 43.478 16.46 0.00 0.00 3.14
4208 5444 3.312697 GGTCGACTTGAAGGAAATATGCC 59.687 47.826 16.46 0.00 0.00 4.40
4209 5445 3.312697 GTCGACTTGAAGGAAATATGCCC 59.687 47.826 8.70 0.00 0.00 5.36
4210 5446 3.199946 TCGACTTGAAGGAAATATGCCCT 59.800 43.478 0.00 0.00 0.00 5.19
4211 5447 4.407621 TCGACTTGAAGGAAATATGCCCTA 59.592 41.667 0.00 0.00 31.36 3.53
4212 5448 4.752101 CGACTTGAAGGAAATATGCCCTAG 59.248 45.833 0.00 0.00 31.36 3.02
4213 5449 5.453339 CGACTTGAAGGAAATATGCCCTAGA 60.453 44.000 0.00 0.00 31.36 2.43
4214 5450 5.934781 ACTTGAAGGAAATATGCCCTAGAG 58.065 41.667 0.00 0.00 31.36 2.43
4215 5451 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 9.739276 GCAGGCACTATCTATCTATCTATCTAT 57.261 37.037 0.00 0.00 36.02 1.98
64 66 8.944138 AGCAGGCACTATCTATCTATCTATCTA 58.056 37.037 0.00 0.00 36.02 1.98
65 67 7.720957 CAGCAGGCACTATCTATCTATCTATCT 59.279 40.741 0.00 0.00 36.02 1.98
66 68 7.502226 ACAGCAGGCACTATCTATCTATCTATC 59.498 40.741 0.00 0.00 36.02 2.08
67 69 7.353525 ACAGCAGGCACTATCTATCTATCTAT 58.646 38.462 0.00 0.00 36.02 1.98
68 70 6.726379 ACAGCAGGCACTATCTATCTATCTA 58.274 40.000 0.00 0.00 36.02 1.98
69 71 5.579047 ACAGCAGGCACTATCTATCTATCT 58.421 41.667 0.00 0.00 36.02 1.98
70 72 5.913137 ACAGCAGGCACTATCTATCTATC 57.087 43.478 0.00 0.00 36.02 2.08
71 73 6.489603 AGTACAGCAGGCACTATCTATCTAT 58.510 40.000 0.00 0.00 36.02 1.98
72 74 5.882040 AGTACAGCAGGCACTATCTATCTA 58.118 41.667 0.00 0.00 36.02 1.98
73 75 4.735369 AGTACAGCAGGCACTATCTATCT 58.265 43.478 0.00 0.00 36.02 1.98
74 76 4.764823 AGAGTACAGCAGGCACTATCTATC 59.235 45.833 0.00 0.00 36.02 2.08
91 93 2.760385 AGGAGCGGGGCAGAGTAC 60.760 66.667 0.00 0.00 0.00 2.73
93 95 3.991924 ATGAGGAGCGGGGCAGAGT 62.992 63.158 0.00 0.00 0.00 3.24
100 102 1.821332 GCCAAGAATGAGGAGCGGG 60.821 63.158 0.00 0.00 0.00 6.13
102 104 1.012841 GAAGCCAAGAATGAGGAGCG 58.987 55.000 0.00 0.00 0.00 5.03
105 107 3.744940 AATGGAAGCCAAGAATGAGGA 57.255 42.857 0.00 0.00 36.95 3.71
137 145 3.744660 TCCTTTGAACCAGAAAGAGAGC 58.255 45.455 0.00 0.00 33.01 4.09
169 177 8.122952 CGGTCTAGAAAGCAAAACTATTTATGG 58.877 37.037 0.00 0.00 0.00 2.74
194 202 0.037326 TCTAAAGTGCAGCCAGGACG 60.037 55.000 0.00 0.00 44.28 4.79
195 203 1.807142 GTTCTAAAGTGCAGCCAGGAC 59.193 52.381 0.00 0.00 39.14 3.85
196 204 1.271379 GGTTCTAAAGTGCAGCCAGGA 60.271 52.381 0.00 0.00 0.00 3.86
200 208 2.226674 GTCTTGGTTCTAAAGTGCAGCC 59.773 50.000 0.00 0.00 0.00 4.85
249 276 5.574830 CAGCTACAAGACATCAGTAAGACAC 59.425 44.000 0.00 0.00 0.00 3.67
269 296 2.511600 GTAACATCCGCGCCAGCT 60.512 61.111 0.00 0.00 42.32 4.24
369 396 5.472320 TGACGTGACAGATTTTCGAAAAA 57.528 34.783 25.77 10.76 0.00 1.94
396 423 0.109458 GGAAAACCGGCAAATCGTCC 60.109 55.000 0.00 0.00 0.00 4.79
424 451 8.092687 GGAAAATAAGTAAGGTGAGAGTACACA 58.907 37.037 0.00 0.00 41.88 3.72
425 452 8.092687 TGGAAAATAAGTAAGGTGAGAGTACAC 58.907 37.037 0.00 0.00 39.70 2.90
554 581 6.954616 TTTGCTCTGCACATTATTGAAATG 57.045 33.333 0.00 0.00 38.71 2.32
568 595 4.439305 TCATGGTTTACATTTGCTCTGC 57.561 40.909 0.00 0.00 37.84 4.26
570 597 7.472334 AGAAATCATGGTTTACATTTGCTCT 57.528 32.000 3.35 0.00 37.84 4.09
571 598 6.470235 CGAGAAATCATGGTTTACATTTGCTC 59.530 38.462 3.35 4.19 37.84 4.26
573 602 5.516339 CCGAGAAATCATGGTTTACATTTGC 59.484 40.000 3.35 0.00 37.84 3.68
586 615 3.706594 TGCCTTCTACTCCGAGAAATCAT 59.293 43.478 1.33 0.00 35.06 2.45
593 676 1.269517 GCTGATGCCTTCTACTCCGAG 60.270 57.143 0.00 0.00 0.00 4.63
632 715 9.908152 GCCGCCTAAGAAAAATTATTGTAATAT 57.092 29.630 0.00 0.00 0.00 1.28
633 716 8.904834 TGCCGCCTAAGAAAAATTATTGTAATA 58.095 29.630 0.00 0.00 0.00 0.98
643 731 3.261580 GCAATTGCCGCCTAAGAAAAAT 58.738 40.909 20.06 0.00 34.31 1.82
674 762 9.989869 GAAAAATCTGTAAACAATAGGAGCTAC 57.010 33.333 0.00 0.00 0.00 3.58
675 763 9.959721 AGAAAAATCTGTAAACAATAGGAGCTA 57.040 29.630 0.00 0.00 0.00 3.32
677 765 9.914131 AAAGAAAAATCTGTAAACAATAGGAGC 57.086 29.630 0.00 0.00 0.00 4.70
733 856 7.986889 ACTACCTCAATTTTGCAATTTCTGTTT 59.013 29.630 0.00 0.00 29.41 2.83
735 858 6.925165 CACTACCTCAATTTTGCAATTTCTGT 59.075 34.615 0.00 0.00 29.41 3.41
739 862 5.990996 CACCACTACCTCAATTTTGCAATTT 59.009 36.000 0.00 0.00 29.41 1.82
743 866 3.826524 TCACCACTACCTCAATTTTGCA 58.173 40.909 0.00 0.00 0.00 4.08
755 878 7.766219 AATTACGTGTTATCATCACCACTAC 57.234 36.000 0.00 0.00 32.86 2.73
793 918 1.441732 GGGGGTGTGTTTGTGTCGTC 61.442 60.000 0.00 0.00 0.00 4.20
804 929 1.984026 GCCATGGAAAGGGGGTGTG 60.984 63.158 18.40 0.00 0.00 3.82
921 1046 1.612442 GGTGGGTCTACAGGAGGCA 60.612 63.158 0.00 0.00 0.00 4.75
922 1047 1.306226 AGGTGGGTCTACAGGAGGC 60.306 63.158 0.00 0.00 0.00 4.70
926 1051 1.038130 CGGAGAGGTGGGTCTACAGG 61.038 65.000 0.00 0.00 0.00 4.00
927 1052 0.034380 TCGGAGAGGTGGGTCTACAG 60.034 60.000 0.00 0.00 0.00 2.74
928 1053 2.081078 TCGGAGAGGTGGGTCTACA 58.919 57.895 0.00 0.00 0.00 2.74
969 1094 4.617520 TGCTTGCAGGCGGACGAA 62.618 61.111 16.68 0.00 34.52 3.85
985 1110 1.153353 CCCATTGCTTTGCTTGCTTG 58.847 50.000 0.00 0.00 0.00 4.01
986 1111 0.035739 CCCCATTGCTTTGCTTGCTT 59.964 50.000 0.00 0.00 0.00 3.91
987 1112 1.123246 ACCCCATTGCTTTGCTTGCT 61.123 50.000 0.00 0.00 0.00 3.91
988 1113 0.952010 CACCCCATTGCTTTGCTTGC 60.952 55.000 0.00 0.00 0.00 4.01
1077 1202 1.853319 CCGGAGAATGTAATCGCGC 59.147 57.895 0.00 0.00 0.00 6.86
1155 1280 1.927174 CTTCTACAAATGCGGACGAGG 59.073 52.381 0.00 0.00 0.00 4.63
1157 1282 1.337354 TGCTTCTACAAATGCGGACGA 60.337 47.619 0.00 0.00 0.00 4.20
1159 1284 1.804151 TGTGCTTCTACAAATGCGGAC 59.196 47.619 0.00 0.00 0.00 4.79
1169 1294 2.289694 TGCCTCCTTTCTGTGCTTCTAC 60.290 50.000 0.00 0.00 0.00 2.59
1172 1297 1.831580 ATGCCTCCTTTCTGTGCTTC 58.168 50.000 0.00 0.00 0.00 3.86
1173 1298 3.439857 TTATGCCTCCTTTCTGTGCTT 57.560 42.857 0.00 0.00 0.00 3.91
1179 1304 4.723789 TCTCCTGAATTATGCCTCCTTTCT 59.276 41.667 0.00 0.00 0.00 2.52
1180 1305 5.041191 TCTCCTGAATTATGCCTCCTTTC 57.959 43.478 0.00 0.00 0.00 2.62
1196 1321 2.159338 CCAAATGCACCGAATTCTCCTG 60.159 50.000 3.52 0.00 0.00 3.86
1215 1340 0.613853 AGAACCCGATCTTCGACCCA 60.614 55.000 0.00 0.00 43.74 4.51
1273 1398 3.847602 CAGCTGGCCGGAGAGAGG 61.848 72.222 18.31 0.00 0.00 3.69
1305 1430 2.920724 TCACTCCCACGAACAAATCA 57.079 45.000 0.00 0.00 0.00 2.57
1540 1679 3.551496 ATGGTGTGTGCTGGACGGG 62.551 63.158 0.00 0.00 0.00 5.28
1541 1680 1.172180 AAATGGTGTGTGCTGGACGG 61.172 55.000 0.00 0.00 0.00 4.79
1542 1681 1.196808 GTAAATGGTGTGTGCTGGACG 59.803 52.381 0.00 0.00 0.00 4.79
1543 1682 1.539827 GGTAAATGGTGTGTGCTGGAC 59.460 52.381 0.00 0.00 0.00 4.02
1544 1683 1.423541 AGGTAAATGGTGTGTGCTGGA 59.576 47.619 0.00 0.00 0.00 3.86
1556 1695 7.766278 ACAGTGCAGAGAATAAGTAGGTAAATG 59.234 37.037 0.00 0.00 0.00 2.32
1570 1709 4.202212 TGCAGTAAAGTACAGTGCAGAGAA 60.202 41.667 9.48 0.00 35.69 2.87
1577 1716 2.131972 TGCGTGCAGTAAAGTACAGTG 58.868 47.619 0.00 0.00 0.00 3.66
1582 1721 5.180304 TCAATCATTTGCGTGCAGTAAAGTA 59.820 36.000 0.00 0.00 37.83 2.24
1583 1722 4.023279 TCAATCATTTGCGTGCAGTAAAGT 60.023 37.500 0.00 0.00 37.83 2.66
1584 1723 4.475028 TCAATCATTTGCGTGCAGTAAAG 58.525 39.130 0.00 0.00 37.83 1.85
1585 1724 4.215185 TCTCAATCATTTGCGTGCAGTAAA 59.785 37.500 0.00 0.00 38.73 2.01
1586 1725 3.750652 TCTCAATCATTTGCGTGCAGTAA 59.249 39.130 0.00 0.00 32.61 2.24
1592 1731 3.601356 GATCGTCTCAATCATTTGCGTG 58.399 45.455 0.00 0.00 32.61 5.34
1637 1776 4.449743 GCATCTAGGAGTAGTAGACAGACG 59.550 50.000 0.00 0.00 29.24 4.18
1650 1789 2.030262 GGCAGCGGCATCTAGGAG 59.970 66.667 11.88 0.00 43.71 3.69
1651 1790 2.142761 ATGGCAGCGGCATCTAGGA 61.143 57.895 11.88 0.00 45.69 2.94
1652 1791 1.964891 CATGGCAGCGGCATCTAGG 60.965 63.158 11.88 0.00 45.69 3.02
1653 1792 0.816825 AACATGGCAGCGGCATCTAG 60.817 55.000 11.88 5.45 45.69 2.43
1654 1793 0.394216 AAACATGGCAGCGGCATCTA 60.394 50.000 11.88 0.00 45.69 1.98
1655 1794 1.252904 AAAACATGGCAGCGGCATCT 61.253 50.000 11.88 0.00 45.69 2.90
1709 1848 0.968901 CTACGGTGGGAGTGCTACCA 60.969 60.000 17.27 0.00 42.49 3.25
1721 1860 2.031465 AAACGGTGGGCTACGGTG 59.969 61.111 14.58 0.19 41.39 4.94
1803 1952 6.398918 TCTTTCCTTCCTTCACTCGAATTAG 58.601 40.000 0.00 0.00 0.00 1.73
1825 1974 2.224793 CCTTTCCCGTTCCCTCTTTTCT 60.225 50.000 0.00 0.00 0.00 2.52
1841 1998 0.107654 CCATCACCGGTCTCCCTTTC 60.108 60.000 2.59 0.00 0.00 2.62
1848 2005 4.101448 GGCTGCCATCACCGGTCT 62.101 66.667 15.17 0.00 0.00 3.85
1872 2029 1.804748 CAACTCCACTACGGAAAAGGC 59.195 52.381 0.00 0.00 45.75 4.35
1931 2088 2.363683 GCAGACAGAGGGGAAAATCTG 58.636 52.381 0.81 0.81 46.76 2.90
2037 2194 0.865769 GTATGCCATTTAGCGTCCGG 59.134 55.000 0.00 0.00 34.65 5.14
2127 2293 2.240279 ACGGCCAGAGGATATACTCAC 58.760 52.381 17.47 5.97 39.97 3.51
2128 2294 2.628178 CAACGGCCAGAGGATATACTCA 59.372 50.000 17.47 0.00 39.97 3.41
2193 2370 2.010582 ATGTTCTCTCTCGCCGCTCC 62.011 60.000 0.00 0.00 0.00 4.70
2201 2378 0.452184 TCGACGCCATGTTCTCTCTC 59.548 55.000 0.00 0.00 0.00 3.20
2202 2379 0.171455 GTCGACGCCATGTTCTCTCT 59.829 55.000 0.00 0.00 0.00 3.10
2203 2380 0.171455 AGTCGACGCCATGTTCTCTC 59.829 55.000 10.46 0.00 0.00 3.20
2204 2381 1.460504 TAGTCGACGCCATGTTCTCT 58.539 50.000 10.46 0.00 0.00 3.10
2243 2420 4.744570 TCCATAACTAACTCGCAAGTGAG 58.255 43.478 8.97 8.97 39.63 3.51
2244 2421 4.794278 TCCATAACTAACTCGCAAGTGA 57.206 40.909 0.00 0.00 35.36 3.41
2245 2422 5.178623 TGTTTCCATAACTAACTCGCAAGTG 59.821 40.000 0.00 0.00 35.36 3.16
2258 2435 2.819608 TCAAGGCAGCTGTTTCCATAAC 59.180 45.455 16.64 0.00 0.00 1.89
2259 2436 2.819608 GTCAAGGCAGCTGTTTCCATAA 59.180 45.455 16.64 0.00 0.00 1.90
2260 2437 2.436417 GTCAAGGCAGCTGTTTCCATA 58.564 47.619 16.64 0.00 0.00 2.74
2287 2464 1.419374 CACACTTCTACGTGCCAGTC 58.581 55.000 0.00 0.00 38.45 3.51
2300 2477 4.379243 CCTCGCGAGGCCACACTT 62.379 66.667 39.83 0.00 42.44 3.16
2378 2555 1.125093 TGGAGTTGTGGACCACCGAT 61.125 55.000 22.00 7.20 39.42 4.18
2379 2556 1.762858 TGGAGTTGTGGACCACCGA 60.763 57.895 22.00 7.91 39.42 4.69
2380 2557 1.597027 GTGGAGTTGTGGACCACCG 60.597 63.158 22.00 0.00 45.53 4.94
2392 2569 5.884232 TGTACGTAGTCTATTCATGTGGAGT 59.116 40.000 0.00 0.00 43.93 3.85
2393 2570 6.200100 GTGTACGTAGTCTATTCATGTGGAG 58.800 44.000 0.00 0.00 43.93 3.86
2394 2571 5.066893 GGTGTACGTAGTCTATTCATGTGGA 59.933 44.000 0.00 0.00 43.93 4.02
2395 2572 5.163591 TGGTGTACGTAGTCTATTCATGTGG 60.164 44.000 0.00 0.00 43.93 4.17
2396 2573 5.742453 GTGGTGTACGTAGTCTATTCATGTG 59.258 44.000 0.00 0.00 43.93 3.21
2397 2574 5.888105 GTGGTGTACGTAGTCTATTCATGT 58.112 41.667 0.00 0.00 43.93 3.21
2461 2638 3.267483 GGCTCGGAGTATAAACAAAGCA 58.733 45.455 6.90 0.00 0.00 3.91
2462 2639 3.063588 GTGGCTCGGAGTATAAACAAAGC 59.936 47.826 6.90 0.00 0.00 3.51
2463 2640 4.250464 TGTGGCTCGGAGTATAAACAAAG 58.750 43.478 6.90 0.00 0.00 2.77
2464 2641 4.274602 TGTGGCTCGGAGTATAAACAAA 57.725 40.909 6.90 0.00 0.00 2.83
2466 2643 3.965379 TTGTGGCTCGGAGTATAAACA 57.035 42.857 6.90 2.19 0.00 2.83
2467 2644 4.094442 CCTTTTGTGGCTCGGAGTATAAAC 59.906 45.833 6.90 0.00 0.00 2.01
2470 2647 3.101437 TCCTTTTGTGGCTCGGAGTATA 58.899 45.455 6.90 0.00 0.00 1.47
2471 2648 1.906574 TCCTTTTGTGGCTCGGAGTAT 59.093 47.619 6.90 0.00 0.00 2.12
2472 2649 1.275291 CTCCTTTTGTGGCTCGGAGTA 59.725 52.381 6.90 0.00 37.17 2.59
2473 2650 0.035458 CTCCTTTTGTGGCTCGGAGT 59.965 55.000 6.90 0.00 37.17 3.85
2474 2651 0.321671 TCTCCTTTTGTGGCTCGGAG 59.678 55.000 0.00 0.00 42.00 4.63
2475 2652 0.762418 TTCTCCTTTTGTGGCTCGGA 59.238 50.000 0.00 0.00 0.00 4.55
2510 2687 1.871676 ACGTTTCTTTCGGCCTTTCTC 59.128 47.619 0.00 0.00 0.00 2.87
2512 2689 1.600485 TGACGTTTCTTTCGGCCTTTC 59.400 47.619 0.00 0.00 35.23 2.62
2518 2695 3.062909 TGACAACTTGACGTTTCTTTCGG 59.937 43.478 0.00 0.00 32.27 4.30
2538 2715 7.308109 GGAAAATGATTTCAGCTTTTGCATTGA 60.308 33.333 3.97 0.00 45.53 2.57
2595 2786 7.230510 TGCACTTAACTTTGGTTTATGTCAGAT 59.769 33.333 0.00 0.00 36.92 2.90
2597 2788 6.636850 GTGCACTTAACTTTGGTTTATGTCAG 59.363 38.462 10.32 0.00 36.92 3.51
2603 2800 3.243134 GCGGTGCACTTAACTTTGGTTTA 60.243 43.478 17.98 0.00 36.92 2.01
2620 2817 2.388232 GCCCGAGTTACTTGCGGTG 61.388 63.158 10.80 4.77 43.35 4.94
2746 2943 1.617263 CCCTCGACCCTCTTCTTGAGA 60.617 57.143 0.00 0.00 45.39 3.27
2840 3052 4.617520 TTCCTGCGCCGCACTGAA 62.618 61.111 8.16 11.57 33.79 3.02
2920 3141 4.436998 GGCTCGGTCACGGTCAGG 62.437 72.222 0.00 0.00 41.39 3.86
2986 3207 2.134789 AGTCCATGTTGAGCCAATCC 57.865 50.000 0.00 0.00 0.00 3.01
3089 3310 3.083997 GGACCCCTGGCTCGTGAT 61.084 66.667 0.00 0.00 0.00 3.06
3284 3505 0.988063 AGTCCTTCTTCTCCCTTGGC 59.012 55.000 0.00 0.00 0.00 4.52
3285 3506 5.459505 TCTATAGTCCTTCTTCTCCCTTGG 58.540 45.833 0.00 0.00 0.00 3.61
3286 3507 6.133356 ACTCTATAGTCCTTCTTCTCCCTTG 58.867 44.000 0.00 0.00 0.00 3.61
3388 3611 9.573133 TCGATTGCTCTATACATACATACATTG 57.427 33.333 0.00 0.00 0.00 2.82
3413 3636 5.504665 GCACCAGTATACATGCTGTCAAATC 60.505 44.000 15.65 0.00 38.62 2.17
3448 3671 0.744281 AACCAAACCAAAGCGGACAG 59.256 50.000 0.00 0.00 38.63 3.51
3463 3686 1.881903 CTGCTCTGCTCTCCGAACCA 61.882 60.000 0.00 0.00 0.00 3.67
3466 3689 1.943116 GCTCTGCTCTGCTCTCCGAA 61.943 60.000 0.00 0.00 0.00 4.30
3467 3690 2.413963 GCTCTGCTCTGCTCTCCGA 61.414 63.158 0.00 0.00 0.00 4.55
3468 3691 2.104729 GCTCTGCTCTGCTCTCCG 59.895 66.667 0.00 0.00 0.00 4.63
3469 3692 1.153588 GTGCTCTGCTCTGCTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
3470 3693 1.153588 GGTGCTCTGCTCTGCTCTC 60.154 63.158 0.00 0.00 0.00 3.20
3471 3694 2.980475 GGTGCTCTGCTCTGCTCT 59.020 61.111 0.00 0.00 0.00 4.09
3472 3695 2.508887 CGGTGCTCTGCTCTGCTC 60.509 66.667 0.00 0.00 0.00 4.26
3473 3696 2.993840 TCGGTGCTCTGCTCTGCT 60.994 61.111 0.00 0.00 0.00 4.24
3474 3697 2.813042 GTCGGTGCTCTGCTCTGC 60.813 66.667 0.00 0.00 0.00 4.26
3475 3698 1.445754 CTGTCGGTGCTCTGCTCTG 60.446 63.158 0.00 0.00 0.00 3.35
3480 3703 2.534298 CATCTTACTGTCGGTGCTCTG 58.466 52.381 0.00 0.00 0.00 3.35
3542 3766 7.888250 TTAACCCTTAACTAGTAGTAGGAGC 57.112 40.000 17.52 0.00 27.53 4.70
3579 4802 3.067833 GTGCTCTATTAAAGCGGGATCC 58.932 50.000 1.92 1.92 42.83 3.36
3584 4807 3.521560 TCACAGTGCTCTATTAAAGCGG 58.478 45.455 0.00 0.00 42.83 5.52
3608 4831 1.618074 GGAAGGGAGCTTGGCAATTCT 60.618 52.381 0.00 0.56 0.00 2.40
3612 4835 1.228552 GTGGAAGGGAGCTTGGCAA 60.229 57.895 0.00 0.00 0.00 4.52
3615 4838 2.820197 GTTAAAGTGGAAGGGAGCTTGG 59.180 50.000 0.00 0.00 0.00 3.61
3623 4846 5.221048 CCTTGACAGTTGTTAAAGTGGAAGG 60.221 44.000 9.90 9.90 40.48 3.46
3720 4943 6.783708 TGAATTTCTTACAACAAGTTGGGT 57.216 33.333 16.45 7.68 44.45 4.51
3751 4974 4.733077 TGTATGGTTTTGGGAGGAAAGA 57.267 40.909 0.00 0.00 0.00 2.52
3761 4984 6.089820 GCTCACAAACATGATGTATGGTTTTG 59.910 38.462 0.00 1.07 44.19 2.44
3832 5055 0.169672 CGACCGACCGAAGCTTCTTA 59.830 55.000 23.50 0.00 0.00 2.10
3835 5058 1.800713 GTCGACCGACCGAAGCTTC 60.801 63.158 16.84 16.84 40.51 3.86
3836 5059 2.197643 GAGTCGACCGACCGAAGCTT 62.198 60.000 17.62 0.00 45.59 3.74
3838 5061 2.202453 GAGTCGACCGACCGAAGC 60.202 66.667 17.62 1.15 45.59 3.86
3839 5062 2.097918 CGAGTCGACCGACCGAAG 59.902 66.667 17.62 4.74 45.59 3.79
3840 5063 4.093952 GCGAGTCGACCGACCGAA 62.094 66.667 25.48 0.00 45.59 4.30
3842 5065 4.517703 GAGCGAGTCGACCGACCG 62.518 72.222 24.32 19.36 45.59 4.79
3863 5094 2.520549 ACTTATGTAGGGGAGAGAGCCT 59.479 50.000 0.00 0.00 0.00 4.58
3884 5115 2.603110 GCGAGCTCGATAAAACACATGA 59.397 45.455 38.74 0.00 43.02 3.07
3940 5176 0.392998 AAATGAGCGGCAGTAGGTGG 60.393 55.000 1.45 0.00 0.00 4.61
3948 5184 1.825090 AAGATGTGAAATGAGCGGCA 58.175 45.000 1.45 0.00 0.00 5.69
3966 5202 3.354678 GCGGCAGCAGAGGAAAAA 58.645 55.556 3.18 0.00 44.35 1.94
3987 5223 0.971959 GGCCAAATGCTGGGTGATGA 60.972 55.000 0.00 0.00 46.54 2.92
4004 5240 1.447314 CTGTTTAGGTCGACGGGGC 60.447 63.158 9.92 0.00 0.00 5.80
4008 5244 0.038526 AGTGCCTGTTTAGGTCGACG 60.039 55.000 9.92 0.00 46.41 5.12
4015 5251 3.425162 AAAGGGAGAGTGCCTGTTTAG 57.575 47.619 0.00 0.00 37.13 1.85
4016 5252 4.506095 GGTTAAAGGGAGAGTGCCTGTTTA 60.506 45.833 0.00 0.00 37.13 2.01
4017 5253 3.487372 GTTAAAGGGAGAGTGCCTGTTT 58.513 45.455 0.00 0.00 37.13 2.83
4018 5254 2.224793 GGTTAAAGGGAGAGTGCCTGTT 60.225 50.000 0.00 0.00 37.13 3.16
4019 5255 1.351350 GGTTAAAGGGAGAGTGCCTGT 59.649 52.381 0.00 0.00 37.13 4.00
4020 5256 1.340114 GGGTTAAAGGGAGAGTGCCTG 60.340 57.143 0.00 0.00 37.13 4.85
4021 5257 0.992695 GGGTTAAAGGGAGAGTGCCT 59.007 55.000 0.00 0.00 41.29 4.75
4022 5258 0.992695 AGGGTTAAAGGGAGAGTGCC 59.007 55.000 0.00 0.00 0.00 5.01
4023 5259 3.181453 GGATAGGGTTAAAGGGAGAGTGC 60.181 52.174 0.00 0.00 0.00 4.40
4024 5260 3.391626 GGGATAGGGTTAAAGGGAGAGTG 59.608 52.174 0.00 0.00 0.00 3.51
4025 5261 3.014807 TGGGATAGGGTTAAAGGGAGAGT 59.985 47.826 0.00 0.00 0.00 3.24
4026 5262 3.665443 TGGGATAGGGTTAAAGGGAGAG 58.335 50.000 0.00 0.00 0.00 3.20
4027 5263 3.807288 TGGGATAGGGTTAAAGGGAGA 57.193 47.619 0.00 0.00 0.00 3.71
4028 5264 4.873724 TTTGGGATAGGGTTAAAGGGAG 57.126 45.455 0.00 0.00 0.00 4.30
4029 5265 4.796816 TGATTTGGGATAGGGTTAAAGGGA 59.203 41.667 0.00 0.00 0.00 4.20
4030 5266 5.103686 TCTGATTTGGGATAGGGTTAAAGGG 60.104 44.000 0.00 0.00 0.00 3.95
4031 5267 6.013554 TCTGATTTGGGATAGGGTTAAAGG 57.986 41.667 0.00 0.00 0.00 3.11
4032 5268 9.236006 CATATCTGATTTGGGATAGGGTTAAAG 57.764 37.037 0.00 0.00 0.00 1.85
4033 5269 8.170061 CCATATCTGATTTGGGATAGGGTTAAA 58.830 37.037 16.60 0.00 39.83 1.52
4034 5270 7.698912 CCATATCTGATTTGGGATAGGGTTAA 58.301 38.462 16.60 0.00 39.83 2.01
4035 5271 6.297010 GCCATATCTGATTTGGGATAGGGTTA 60.297 42.308 23.00 0.00 43.83 2.85
4036 5272 5.517299 GCCATATCTGATTTGGGATAGGGTT 60.517 44.000 23.00 0.00 43.83 4.11
4037 5273 4.018050 GCCATATCTGATTTGGGATAGGGT 60.018 45.833 23.00 0.00 43.83 4.34
4038 5274 4.229123 AGCCATATCTGATTTGGGATAGGG 59.771 45.833 23.00 8.65 44.38 3.53
4039 5275 5.191426 CAGCCATATCTGATTTGGGATAGG 58.809 45.833 23.00 3.26 36.19 2.57
4040 5276 4.639310 GCAGCCATATCTGATTTGGGATAG 59.361 45.833 23.00 3.90 36.19 2.08
4041 5277 4.043184 TGCAGCCATATCTGATTTGGGATA 59.957 41.667 23.00 4.07 36.19 2.59
4042 5278 3.181426 TGCAGCCATATCTGATTTGGGAT 60.181 43.478 23.00 7.77 36.19 3.85
4043 5279 2.175284 TGCAGCCATATCTGATTTGGGA 59.825 45.455 23.00 2.23 36.19 4.37
4044 5280 2.589720 TGCAGCCATATCTGATTTGGG 58.410 47.619 23.00 12.08 36.19 4.12
4045 5281 3.614150 GCATGCAGCCATATCTGATTTGG 60.614 47.826 19.16 19.16 36.19 3.28
4046 5282 3.575630 GCATGCAGCCATATCTGATTTG 58.424 45.455 14.21 0.00 36.19 2.32
4047 5283 3.936372 GCATGCAGCCATATCTGATTT 57.064 42.857 14.21 0.00 36.19 2.17
4059 5295 1.994507 CTTGCCTCTCAGCATGCAGC 61.995 60.000 21.98 12.52 43.64 5.25
4060 5296 2.099143 CTTGCCTCTCAGCATGCAG 58.901 57.895 21.98 12.90 43.64 4.41
4061 5297 4.313819 CTTGCCTCTCAGCATGCA 57.686 55.556 21.98 0.00 43.64 3.96
4063 5299 1.377366 CTGGCTTGCCTCTCAGCATG 61.377 60.000 13.18 0.00 43.64 4.06
4064 5300 1.077644 CTGGCTTGCCTCTCAGCAT 60.078 57.895 13.18 0.00 43.64 3.79
4065 5301 2.219164 TCTGGCTTGCCTCTCAGCA 61.219 57.895 13.18 0.00 42.17 4.41
4066 5302 1.744741 GTCTGGCTTGCCTCTCAGC 60.745 63.158 13.18 0.00 0.00 4.26
4067 5303 0.391395 CTGTCTGGCTTGCCTCTCAG 60.391 60.000 13.18 12.83 0.00 3.35
4068 5304 1.123861 ACTGTCTGGCTTGCCTCTCA 61.124 55.000 13.18 7.84 0.00 3.27
4069 5305 0.673022 CACTGTCTGGCTTGCCTCTC 60.673 60.000 13.18 3.84 0.00 3.20
4070 5306 1.374190 CACTGTCTGGCTTGCCTCT 59.626 57.895 13.18 0.00 0.00 3.69
4071 5307 1.072159 ACACTGTCTGGCTTGCCTC 59.928 57.895 13.18 4.50 0.00 4.70
4072 5308 1.228063 CACACTGTCTGGCTTGCCT 60.228 57.895 13.18 0.00 0.00 4.75
4073 5309 1.526917 ACACACTGTCTGGCTTGCC 60.527 57.895 4.43 4.43 0.00 4.52
4074 5310 1.650912 CACACACTGTCTGGCTTGC 59.349 57.895 0.00 0.00 0.00 4.01
4075 5311 1.168407 CCCACACACTGTCTGGCTTG 61.168 60.000 0.00 0.00 0.00 4.01
4076 5312 1.149174 CCCACACACTGTCTGGCTT 59.851 57.895 0.00 0.00 0.00 4.35
4077 5313 2.831770 CCCACACACTGTCTGGCT 59.168 61.111 0.00 0.00 0.00 4.75
4078 5314 2.980233 GCCCACACACTGTCTGGC 60.980 66.667 0.00 0.00 37.91 4.85
4079 5315 0.957395 GATGCCCACACACTGTCTGG 60.957 60.000 0.00 0.00 0.00 3.86
4080 5316 0.250424 TGATGCCCACACACTGTCTG 60.250 55.000 0.00 0.00 0.00 3.51
4081 5317 0.694771 ATGATGCCCACACACTGTCT 59.305 50.000 0.00 0.00 0.00 3.41
4082 5318 2.009774 GTATGATGCCCACACACTGTC 58.990 52.381 0.00 0.00 0.00 3.51
4083 5319 1.630369 AGTATGATGCCCACACACTGT 59.370 47.619 0.00 0.00 0.00 3.55
4084 5320 2.408271 AGTATGATGCCCACACACTG 57.592 50.000 0.00 0.00 0.00 3.66
4085 5321 2.618816 CCAAGTATGATGCCCACACACT 60.619 50.000 0.00 0.00 0.00 3.55
4086 5322 1.745087 CCAAGTATGATGCCCACACAC 59.255 52.381 0.00 0.00 0.00 3.82
4087 5323 1.340893 CCCAAGTATGATGCCCACACA 60.341 52.381 0.00 0.00 0.00 3.72
4088 5324 1.064758 TCCCAAGTATGATGCCCACAC 60.065 52.381 0.00 0.00 0.00 3.82
4089 5325 1.212688 CTCCCAAGTATGATGCCCACA 59.787 52.381 0.00 0.00 0.00 4.17
4090 5326 1.477558 CCTCCCAAGTATGATGCCCAC 60.478 57.143 0.00 0.00 0.00 4.61
4091 5327 0.846015 CCTCCCAAGTATGATGCCCA 59.154 55.000 0.00 0.00 0.00 5.36
4092 5328 0.846693 ACCTCCCAAGTATGATGCCC 59.153 55.000 0.00 0.00 0.00 5.36
4093 5329 1.541233 CGACCTCCCAAGTATGATGCC 60.541 57.143 0.00 0.00 0.00 4.40
4094 5330 1.412710 TCGACCTCCCAAGTATGATGC 59.587 52.381 0.00 0.00 0.00 3.91
4095 5331 2.036475 CCTCGACCTCCCAAGTATGATG 59.964 54.545 0.00 0.00 0.00 3.07
4096 5332 2.320781 CCTCGACCTCCCAAGTATGAT 58.679 52.381 0.00 0.00 0.00 2.45
4097 5333 1.688311 CCCTCGACCTCCCAAGTATGA 60.688 57.143 0.00 0.00 0.00 2.15
4098 5334 0.753262 CCCTCGACCTCCCAAGTATG 59.247 60.000 0.00 0.00 0.00 2.39
4099 5335 0.398664 CCCCTCGACCTCCCAAGTAT 60.399 60.000 0.00 0.00 0.00 2.12
4100 5336 1.001248 CCCCTCGACCTCCCAAGTA 59.999 63.158 0.00 0.00 0.00 2.24
4101 5337 2.284699 CCCCTCGACCTCCCAAGT 60.285 66.667 0.00 0.00 0.00 3.16
4102 5338 3.083997 CCCCCTCGACCTCCCAAG 61.084 72.222 0.00 0.00 0.00 3.61
4116 5352 2.808206 CGTCACCCTCATAGCCCCC 61.808 68.421 0.00 0.00 0.00 5.40
4117 5353 2.822399 CGTCACCCTCATAGCCCC 59.178 66.667 0.00 0.00 0.00 5.80
4118 5354 2.109181 GCGTCACCCTCATAGCCC 59.891 66.667 0.00 0.00 0.00 5.19
4119 5355 2.044806 ATGGCGTCACCCTCATAGCC 62.045 60.000 0.00 0.00 44.38 3.93
4120 5356 0.601311 GATGGCGTCACCCTCATAGC 60.601 60.000 0.00 0.00 37.83 2.97
4121 5357 0.319040 CGATGGCGTCACCCTCATAG 60.319 60.000 7.60 0.00 37.83 2.23
4122 5358 1.739667 CGATGGCGTCACCCTCATA 59.260 57.895 7.60 0.00 37.83 2.15
4123 5359 2.501128 CGATGGCGTCACCCTCAT 59.499 61.111 7.60 0.00 37.83 2.90
4124 5360 4.451150 GCGATGGCGTCACCCTCA 62.451 66.667 7.60 0.00 40.36 3.86
4134 5370 2.171725 GGTTCCAGTACGCGATGGC 61.172 63.158 15.93 6.01 36.47 4.40
4135 5371 0.806102 CAGGTTCCAGTACGCGATGG 60.806 60.000 15.93 18.03 37.97 3.51
4136 5372 0.806102 CCAGGTTCCAGTACGCGATG 60.806 60.000 15.93 8.55 0.00 3.84
4137 5373 1.255667 ACCAGGTTCCAGTACGCGAT 61.256 55.000 15.93 0.00 0.00 4.58
4138 5374 1.870055 GACCAGGTTCCAGTACGCGA 61.870 60.000 15.93 0.00 0.00 5.87
4139 5375 1.445582 GACCAGGTTCCAGTACGCG 60.446 63.158 3.53 3.53 0.00 6.01
4140 5376 1.445582 CGACCAGGTTCCAGTACGC 60.446 63.158 0.00 0.00 0.00 4.42
4141 5377 0.109412 GTCGACCAGGTTCCAGTACG 60.109 60.000 3.51 0.00 0.00 3.67
4142 5378 0.963962 TGTCGACCAGGTTCCAGTAC 59.036 55.000 14.12 0.00 0.00 2.73
4143 5379 0.963962 GTGTCGACCAGGTTCCAGTA 59.036 55.000 14.12 0.00 0.00 2.74
4144 5380 0.759436 AGTGTCGACCAGGTTCCAGT 60.759 55.000 14.12 0.00 0.00 4.00
4145 5381 0.319900 CAGTGTCGACCAGGTTCCAG 60.320 60.000 14.12 0.00 0.00 3.86
4146 5382 0.757561 TCAGTGTCGACCAGGTTCCA 60.758 55.000 14.12 0.00 0.00 3.53
4147 5383 0.608640 ATCAGTGTCGACCAGGTTCC 59.391 55.000 14.12 0.00 0.00 3.62
4148 5384 1.714794 CATCAGTGTCGACCAGGTTC 58.285 55.000 14.12 0.00 0.00 3.62
4149 5385 0.320771 GCATCAGTGTCGACCAGGTT 60.321 55.000 14.12 0.00 0.00 3.50
4150 5386 1.188219 AGCATCAGTGTCGACCAGGT 61.188 55.000 14.12 0.00 0.00 4.00
4151 5387 0.036952 AAGCATCAGTGTCGACCAGG 60.037 55.000 14.12 1.91 0.00 4.45
4152 5388 1.800805 AAAGCATCAGTGTCGACCAG 58.199 50.000 14.12 2.73 0.00 4.00
4153 5389 2.254546 AAAAGCATCAGTGTCGACCA 57.745 45.000 14.12 0.00 0.00 4.02
4154 5390 2.548057 TGAAAAAGCATCAGTGTCGACC 59.452 45.455 14.12 4.42 0.00 4.79
4155 5391 3.545633 GTGAAAAAGCATCAGTGTCGAC 58.454 45.455 9.11 9.11 0.00 4.20
4156 5392 2.548057 GGTGAAAAAGCATCAGTGTCGA 59.452 45.455 0.00 0.00 0.00 4.20
4157 5393 2.662791 CGGTGAAAAAGCATCAGTGTCG 60.663 50.000 0.00 0.00 0.00 4.35
4158 5394 2.548057 TCGGTGAAAAAGCATCAGTGTC 59.452 45.455 0.00 0.00 0.00 3.67
4159 5395 2.571212 TCGGTGAAAAAGCATCAGTGT 58.429 42.857 0.00 0.00 0.00 3.55
4160 5396 3.495193 CATCGGTGAAAAAGCATCAGTG 58.505 45.455 0.00 0.00 0.00 3.66
4161 5397 2.489329 CCATCGGTGAAAAAGCATCAGT 59.511 45.455 0.00 0.00 0.00 3.41
4162 5398 2.159338 CCCATCGGTGAAAAAGCATCAG 60.159 50.000 0.00 0.00 0.00 2.90
4163 5399 1.818060 CCCATCGGTGAAAAAGCATCA 59.182 47.619 0.00 0.00 0.00 3.07
4164 5400 2.091541 TCCCATCGGTGAAAAAGCATC 58.908 47.619 0.00 0.00 0.00 3.91
4165 5401 2.214376 TCCCATCGGTGAAAAAGCAT 57.786 45.000 0.00 0.00 0.00 3.79
4166 5402 1.818060 CATCCCATCGGTGAAAAAGCA 59.182 47.619 0.00 0.00 0.00 3.91
4167 5403 1.134946 CCATCCCATCGGTGAAAAAGC 59.865 52.381 0.00 0.00 0.00 3.51
4168 5404 2.423538 GACCATCCCATCGGTGAAAAAG 59.576 50.000 0.00 0.00 34.99 2.27
4169 5405 2.442413 GACCATCCCATCGGTGAAAAA 58.558 47.619 0.00 0.00 34.99 1.94
4170 5406 1.677518 CGACCATCCCATCGGTGAAAA 60.678 52.381 0.00 0.00 34.99 2.29
4171 5407 0.107897 CGACCATCCCATCGGTGAAA 60.108 55.000 0.00 0.00 34.99 2.69
4172 5408 0.973496 TCGACCATCCCATCGGTGAA 60.973 55.000 0.00 0.00 38.86 3.18
4173 5409 1.380650 TCGACCATCCCATCGGTGA 60.381 57.895 0.00 0.00 38.86 4.02
4174 5410 1.227263 GTCGACCATCCCATCGGTG 60.227 63.158 3.51 0.00 38.86 4.94
4175 5411 0.976073 AAGTCGACCATCCCATCGGT 60.976 55.000 13.01 0.00 38.86 4.69
4176 5412 0.530650 CAAGTCGACCATCCCATCGG 60.531 60.000 13.01 0.00 38.86 4.18
4177 5413 0.459899 TCAAGTCGACCATCCCATCG 59.540 55.000 13.01 0.00 39.72 3.84
4178 5414 2.555199 CTTCAAGTCGACCATCCCATC 58.445 52.381 13.01 0.00 0.00 3.51
4179 5415 1.210478 CCTTCAAGTCGACCATCCCAT 59.790 52.381 13.01 0.00 0.00 4.00
4180 5416 0.613260 CCTTCAAGTCGACCATCCCA 59.387 55.000 13.01 0.00 0.00 4.37
4181 5417 0.902531 TCCTTCAAGTCGACCATCCC 59.097 55.000 13.01 0.00 0.00 3.85
4182 5418 2.762535 TTCCTTCAAGTCGACCATCC 57.237 50.000 13.01 0.00 0.00 3.51
4183 5419 5.277538 GCATATTTCCTTCAAGTCGACCATC 60.278 44.000 13.01 0.00 0.00 3.51
4184 5420 4.576463 GCATATTTCCTTCAAGTCGACCAT 59.424 41.667 13.01 0.00 0.00 3.55
4185 5421 3.938963 GCATATTTCCTTCAAGTCGACCA 59.061 43.478 13.01 0.00 0.00 4.02
4186 5422 3.312697 GGCATATTTCCTTCAAGTCGACC 59.687 47.826 13.01 0.00 0.00 4.79
4187 5423 3.312697 GGGCATATTTCCTTCAAGTCGAC 59.687 47.826 7.70 7.70 0.00 4.20
4188 5424 3.199946 AGGGCATATTTCCTTCAAGTCGA 59.800 43.478 0.00 0.00 0.00 4.20
4189 5425 3.545703 AGGGCATATTTCCTTCAAGTCG 58.454 45.455 0.00 0.00 0.00 4.18
4190 5426 5.930135 TCTAGGGCATATTTCCTTCAAGTC 58.070 41.667 0.00 0.00 34.75 3.01
4191 5427 5.163152 CCTCTAGGGCATATTTCCTTCAAGT 60.163 44.000 0.00 0.00 34.75 3.16
4192 5428 5.312079 CCTCTAGGGCATATTTCCTTCAAG 58.688 45.833 0.00 0.00 34.75 3.02
4193 5429 5.310409 CCTCTAGGGCATATTTCCTTCAA 57.690 43.478 0.00 0.00 34.75 2.69
4194 5430 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.