Multiple sequence alignment - TraesCS6A01G234800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G234800 chr6A 100.000 3882 0 0 1 3882 443418151 443414270 0.000000e+00 7169.0
1 TraesCS6A01G234800 chr6D 91.701 3169 126 55 139 3212 307114274 307111148 0.000000e+00 4268.0
2 TraesCS6A01G234800 chr6D 97.561 82 1 1 3296 3377 307110878 307110798 5.230000e-29 139.0
3 TraesCS6A01G234800 chr6D 97.619 42 1 0 3229 3270 307111037 307110996 5.380000e-09 73.1
4 TraesCS6A01G234800 chr6B 93.883 1455 67 12 1656 3101 474429434 474427993 0.000000e+00 2174.0
5 TraesCS6A01G234800 chr6B 87.323 1412 79 55 198 1555 474430799 474429434 0.000000e+00 1524.0
6 TraesCS6A01G234800 chr6B 83.019 371 51 10 3516 3876 474426559 474426191 3.740000e-85 326.0
7 TraesCS6A01G234800 chr1B 76.364 330 31 18 2752 3073 658517782 658517492 2.430000e-27 134.0
8 TraesCS6A01G234800 chr1B 100.000 29 0 0 3150 3178 658517363 658517335 2.000000e-03 54.7
9 TraesCS6A01G234800 chr2B 90.244 82 8 0 1284 1365 555779623 555779704 1.470000e-19 108.0
10 TraesCS6A01G234800 chr2D 88.158 76 9 0 1284 1359 474676808 474676883 1.490000e-14 91.6
11 TraesCS6A01G234800 chr4D 87.500 64 0 3 3150 3205 414992895 414992958 2.500000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G234800 chr6A 443414270 443418151 3881 True 7169.000000 7169 100.000 1 3882 1 chr6A.!!$R1 3881
1 TraesCS6A01G234800 chr6D 307110798 307114274 3476 True 1493.366667 4268 95.627 139 3377 3 chr6D.!!$R1 3238
2 TraesCS6A01G234800 chr6B 474426191 474430799 4608 True 1341.333333 2174 88.075 198 3876 3 chr6B.!!$R1 3678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
685 691 0.036388 TCCATCTTTCCACGAGCACC 60.036 55.0 0.0 0.0 0.0 5.01 F
989 1047 0.037697 CTCACCAAACCATCCGTCGA 60.038 55.0 0.0 0.0 0.0 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1641 1734 0.178301 GAACGGAGACCATCTTCCCC 59.822 60.0 0.0 0.0 0.0 4.81 R
2936 3032 0.537143 ACCGTGAAAGCAGCAATCCA 60.537 50.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.317280 AGGGCGAGAGGGACATTAA 57.683 52.632 0.00 0.00 0.00 1.40
19 20 1.123928 AGGGCGAGAGGGACATTAAG 58.876 55.000 0.00 0.00 0.00 1.85
20 21 1.120530 GGGCGAGAGGGACATTAAGA 58.879 55.000 0.00 0.00 0.00 2.10
21 22 1.485066 GGGCGAGAGGGACATTAAGAA 59.515 52.381 0.00 0.00 0.00 2.52
22 23 2.093128 GGGCGAGAGGGACATTAAGAAA 60.093 50.000 0.00 0.00 0.00 2.52
23 24 3.606687 GGCGAGAGGGACATTAAGAAAA 58.393 45.455 0.00 0.00 0.00 2.29
24 25 3.374367 GGCGAGAGGGACATTAAGAAAAC 59.626 47.826 0.00 0.00 0.00 2.43
25 26 3.062234 GCGAGAGGGACATTAAGAAAACG 59.938 47.826 0.00 0.00 0.00 3.60
26 27 3.617263 CGAGAGGGACATTAAGAAAACGG 59.383 47.826 0.00 0.00 0.00 4.44
27 28 4.576879 GAGAGGGACATTAAGAAAACGGT 58.423 43.478 0.00 0.00 0.00 4.83
28 29 4.576879 AGAGGGACATTAAGAAAACGGTC 58.423 43.478 0.00 0.00 0.00 4.79
29 30 4.041198 AGAGGGACATTAAGAAAACGGTCA 59.959 41.667 0.00 0.00 0.00 4.02
30 31 4.721132 AGGGACATTAAGAAAACGGTCAA 58.279 39.130 0.00 0.00 0.00 3.18
31 32 4.517832 AGGGACATTAAGAAAACGGTCAAC 59.482 41.667 0.00 0.00 0.00 3.18
32 33 4.517832 GGGACATTAAGAAAACGGTCAACT 59.482 41.667 0.00 0.00 0.00 3.16
33 34 5.009310 GGGACATTAAGAAAACGGTCAACTT 59.991 40.000 0.00 0.00 0.00 2.66
34 35 5.912955 GGACATTAAGAAAACGGTCAACTTG 59.087 40.000 0.00 0.00 0.00 3.16
35 36 5.827666 ACATTAAGAAAACGGTCAACTTGG 58.172 37.500 0.00 0.00 0.00 3.61
36 37 5.591067 ACATTAAGAAAACGGTCAACTTGGA 59.409 36.000 0.00 0.00 0.00 3.53
37 38 5.744666 TTAAGAAAACGGTCAACTTGGAG 57.255 39.130 0.00 0.00 0.00 3.86
38 39 2.572290 AGAAAACGGTCAACTTGGAGG 58.428 47.619 0.00 0.00 0.00 4.30
39 40 1.001706 GAAAACGGTCAACTTGGAGGC 60.002 52.381 0.00 0.00 0.00 4.70
40 41 0.182775 AAACGGTCAACTTGGAGGCT 59.817 50.000 0.00 0.00 0.00 4.58
41 42 0.250338 AACGGTCAACTTGGAGGCTC 60.250 55.000 5.78 5.78 0.00 4.70
42 43 1.122019 ACGGTCAACTTGGAGGCTCT 61.122 55.000 15.23 0.00 0.00 4.09
43 44 0.895530 CGGTCAACTTGGAGGCTCTA 59.104 55.000 15.23 5.21 0.00 2.43
44 45 1.482593 CGGTCAACTTGGAGGCTCTAT 59.517 52.381 15.23 0.00 0.00 1.98
45 46 2.739932 CGGTCAACTTGGAGGCTCTATG 60.740 54.545 15.23 13.12 0.00 2.23
46 47 2.501723 GGTCAACTTGGAGGCTCTATGA 59.498 50.000 18.52 9.29 0.00 2.15
47 48 3.055094 GGTCAACTTGGAGGCTCTATGAA 60.055 47.826 18.52 5.05 0.00 2.57
48 49 4.187694 GTCAACTTGGAGGCTCTATGAAG 58.812 47.826 18.52 14.73 0.00 3.02
49 50 3.840666 TCAACTTGGAGGCTCTATGAAGT 59.159 43.478 18.52 15.26 0.00 3.01
50 51 5.023452 TCAACTTGGAGGCTCTATGAAGTA 58.977 41.667 18.52 4.81 0.00 2.24
51 52 5.127845 TCAACTTGGAGGCTCTATGAAGTAG 59.872 44.000 18.52 7.04 0.00 2.57
52 53 3.964031 ACTTGGAGGCTCTATGAAGTAGG 59.036 47.826 18.52 0.36 0.00 3.18
53 54 3.973472 TGGAGGCTCTATGAAGTAGGA 57.027 47.619 15.23 0.00 0.00 2.94
54 55 4.265856 TGGAGGCTCTATGAAGTAGGAA 57.734 45.455 15.23 0.00 0.00 3.36
55 56 4.219115 TGGAGGCTCTATGAAGTAGGAAG 58.781 47.826 15.23 0.00 0.00 3.46
56 57 3.576550 GGAGGCTCTATGAAGTAGGAAGG 59.423 52.174 15.23 0.00 0.00 3.46
57 58 3.576550 GAGGCTCTATGAAGTAGGAAGGG 59.423 52.174 7.40 0.00 0.00 3.95
58 59 3.207777 AGGCTCTATGAAGTAGGAAGGGA 59.792 47.826 0.00 0.00 0.00 4.20
59 60 3.576550 GGCTCTATGAAGTAGGAAGGGAG 59.423 52.174 0.00 0.00 0.00 4.30
60 61 3.006430 GCTCTATGAAGTAGGAAGGGAGC 59.994 52.174 0.00 0.00 37.19 4.70
61 62 4.479158 CTCTATGAAGTAGGAAGGGAGCT 58.521 47.826 0.00 0.00 0.00 4.09
62 63 4.884961 TCTATGAAGTAGGAAGGGAGCTT 58.115 43.478 0.00 0.00 0.00 3.74
63 64 5.281314 TCTATGAAGTAGGAAGGGAGCTTT 58.719 41.667 0.00 0.00 0.00 3.51
64 65 3.983044 TGAAGTAGGAAGGGAGCTTTC 57.017 47.619 0.00 0.00 0.00 2.62
65 66 3.248024 TGAAGTAGGAAGGGAGCTTTCA 58.752 45.455 0.00 0.00 0.00 2.69
66 67 3.261897 TGAAGTAGGAAGGGAGCTTTCAG 59.738 47.826 0.00 0.00 0.00 3.02
67 68 1.557371 AGTAGGAAGGGAGCTTTCAGC 59.443 52.381 0.00 0.00 42.84 4.26
77 78 3.042481 GCTTTCAGCTTTGGTCCCT 57.958 52.632 0.00 0.00 38.45 4.20
78 79 0.884514 GCTTTCAGCTTTGGTCCCTC 59.115 55.000 0.00 0.00 38.45 4.30
79 80 1.546548 GCTTTCAGCTTTGGTCCCTCT 60.547 52.381 0.00 0.00 38.45 3.69
80 81 2.868899 CTTTCAGCTTTGGTCCCTCTT 58.131 47.619 0.00 0.00 0.00 2.85
81 82 2.276732 TTCAGCTTTGGTCCCTCTTG 57.723 50.000 0.00 0.00 0.00 3.02
82 83 1.140312 TCAGCTTTGGTCCCTCTTGT 58.860 50.000 0.00 0.00 0.00 3.16
83 84 1.494721 TCAGCTTTGGTCCCTCTTGTT 59.505 47.619 0.00 0.00 0.00 2.83
84 85 2.091885 TCAGCTTTGGTCCCTCTTGTTT 60.092 45.455 0.00 0.00 0.00 2.83
85 86 2.035066 CAGCTTTGGTCCCTCTTGTTTG 59.965 50.000 0.00 0.00 0.00 2.93
86 87 2.031870 GCTTTGGTCCCTCTTGTTTGT 58.968 47.619 0.00 0.00 0.00 2.83
87 88 2.430694 GCTTTGGTCCCTCTTGTTTGTT 59.569 45.455 0.00 0.00 0.00 2.83
88 89 3.118775 GCTTTGGTCCCTCTTGTTTGTTT 60.119 43.478 0.00 0.00 0.00 2.83
89 90 4.098807 GCTTTGGTCCCTCTTGTTTGTTTA 59.901 41.667 0.00 0.00 0.00 2.01
90 91 5.585820 TTTGGTCCCTCTTGTTTGTTTAC 57.414 39.130 0.00 0.00 0.00 2.01
91 92 3.558033 TGGTCCCTCTTGTTTGTTTACC 58.442 45.455 0.00 0.00 0.00 2.85
92 93 3.203487 TGGTCCCTCTTGTTTGTTTACCT 59.797 43.478 0.00 0.00 0.00 3.08
93 94 4.212716 GGTCCCTCTTGTTTGTTTACCTT 58.787 43.478 0.00 0.00 0.00 3.50
94 95 5.104024 TGGTCCCTCTTGTTTGTTTACCTTA 60.104 40.000 0.00 0.00 0.00 2.69
95 96 5.472478 GGTCCCTCTTGTTTGTTTACCTTAG 59.528 44.000 0.00 0.00 0.00 2.18
96 97 5.048921 GTCCCTCTTGTTTGTTTACCTTAGC 60.049 44.000 0.00 0.00 0.00 3.09
97 98 4.217767 CCCTCTTGTTTGTTTACCTTAGCC 59.782 45.833 0.00 0.00 0.00 3.93
98 99 4.825085 CCTCTTGTTTGTTTACCTTAGCCA 59.175 41.667 0.00 0.00 0.00 4.75
99 100 5.476945 CCTCTTGTTTGTTTACCTTAGCCAT 59.523 40.000 0.00 0.00 0.00 4.40
100 101 6.325919 TCTTGTTTGTTTACCTTAGCCATG 57.674 37.500 0.00 0.00 0.00 3.66
101 102 5.242838 TCTTGTTTGTTTACCTTAGCCATGG 59.757 40.000 7.63 7.63 0.00 3.66
102 103 4.730966 TGTTTGTTTACCTTAGCCATGGA 58.269 39.130 18.40 0.00 0.00 3.41
103 104 4.764823 TGTTTGTTTACCTTAGCCATGGAG 59.235 41.667 18.40 3.56 0.00 3.86
104 105 4.650972 TTGTTTACCTTAGCCATGGAGT 57.349 40.909 18.40 3.75 0.00 3.85
105 106 4.216411 TGTTTACCTTAGCCATGGAGTC 57.784 45.455 18.40 0.00 0.00 3.36
106 107 3.844211 TGTTTACCTTAGCCATGGAGTCT 59.156 43.478 18.40 5.68 0.00 3.24
107 108 4.081087 TGTTTACCTTAGCCATGGAGTCTC 60.081 45.833 18.40 0.00 0.00 3.36
108 109 2.559381 ACCTTAGCCATGGAGTCTCT 57.441 50.000 18.40 4.83 0.00 3.10
109 110 2.114616 ACCTTAGCCATGGAGTCTCTG 58.885 52.381 18.40 0.00 0.00 3.35
110 111 2.114616 CCTTAGCCATGGAGTCTCTGT 58.885 52.381 18.40 0.00 0.00 3.41
111 112 2.158986 CCTTAGCCATGGAGTCTCTGTG 60.159 54.545 18.40 0.16 0.00 3.66
112 113 0.826715 TAGCCATGGAGTCTCTGTGC 59.173 55.000 18.40 0.00 0.00 4.57
113 114 1.451028 GCCATGGAGTCTCTGTGCC 60.451 63.158 18.40 0.00 0.00 5.01
114 115 1.985614 CCATGGAGTCTCTGTGCCA 59.014 57.895 5.56 0.00 34.45 4.92
115 116 0.107800 CCATGGAGTCTCTGTGCCAG 60.108 60.000 5.56 0.00 33.26 4.85
116 117 0.900421 CATGGAGTCTCTGTGCCAGA 59.100 55.000 0.00 5.03 38.25 3.86
117 118 0.901124 ATGGAGTCTCTGTGCCAGAC 59.099 55.000 0.00 0.00 40.67 3.51
118 119 0.469892 TGGAGTCTCTGTGCCAGACA 60.470 55.000 0.00 0.00 42.51 3.41
119 120 0.901124 GGAGTCTCTGTGCCAGACAT 59.099 55.000 0.00 0.00 42.51 3.06
120 121 2.103373 GGAGTCTCTGTGCCAGACATA 58.897 52.381 0.00 0.00 42.51 2.29
121 122 2.697751 GGAGTCTCTGTGCCAGACATAT 59.302 50.000 0.00 0.00 42.51 1.78
122 123 3.891977 GGAGTCTCTGTGCCAGACATATA 59.108 47.826 0.00 0.00 42.51 0.86
123 124 4.526262 GGAGTCTCTGTGCCAGACATATAT 59.474 45.833 0.00 0.00 42.51 0.86
124 125 5.011533 GGAGTCTCTGTGCCAGACATATATT 59.988 44.000 0.00 0.00 42.51 1.28
125 126 6.463614 GGAGTCTCTGTGCCAGACATATATTT 60.464 42.308 0.00 0.00 42.51 1.40
126 127 6.286758 AGTCTCTGTGCCAGACATATATTTG 58.713 40.000 2.84 0.00 42.51 2.32
127 128 6.051717 GTCTCTGTGCCAGACATATATTTGT 58.948 40.000 0.00 0.00 40.18 2.83
128 129 6.540189 GTCTCTGTGCCAGACATATATTTGTT 59.460 38.462 0.11 0.00 40.18 2.83
129 130 7.710907 GTCTCTGTGCCAGACATATATTTGTTA 59.289 37.037 0.11 0.00 40.18 2.41
130 131 7.710907 TCTCTGTGCCAGACATATATTTGTTAC 59.289 37.037 0.11 0.00 35.39 2.50
131 132 6.765989 TCTGTGCCAGACATATATTTGTTACC 59.234 38.462 0.11 0.00 35.39 2.85
132 133 6.658849 TGTGCCAGACATATATTTGTTACCT 58.341 36.000 0.11 0.00 0.00 3.08
133 134 6.765989 TGTGCCAGACATATATTTGTTACCTC 59.234 38.462 0.11 0.00 0.00 3.85
134 135 6.992715 GTGCCAGACATATATTTGTTACCTCT 59.007 38.462 0.11 0.00 0.00 3.69
135 136 7.499232 GTGCCAGACATATATTTGTTACCTCTT 59.501 37.037 0.11 0.00 0.00 2.85
136 137 7.498900 TGCCAGACATATATTTGTTACCTCTTG 59.501 37.037 0.11 0.00 0.00 3.02
137 138 7.499232 GCCAGACATATATTTGTTACCTCTTGT 59.501 37.037 0.11 0.00 0.00 3.16
165 166 1.010419 GGCAAGCCAGCAATTCGTTG 61.010 55.000 6.14 0.00 35.83 4.10
192 193 2.034066 ACCATTCACTGCGGGTGG 59.966 61.111 9.26 8.04 45.38 4.61
193 194 3.443045 CCATTCACTGCGGGTGGC 61.443 66.667 9.26 0.00 45.38 5.01
194 195 3.443045 CATTCACTGCGGGTGGCC 61.443 66.667 0.00 0.00 45.38 5.36
195 196 4.740822 ATTCACTGCGGGTGGCCC 62.741 66.667 0.00 0.00 45.38 5.80
344 345 9.018582 TCTATCAATGACCTGATGATGTACTAG 57.981 37.037 0.00 0.00 36.69 2.57
345 346 5.847304 TCAATGACCTGATGATGTACTAGC 58.153 41.667 0.00 0.00 0.00 3.42
350 351 6.071320 TGACCTGATGATGTACTAGCAGTAT 58.929 40.000 0.00 0.00 32.65 2.12
351 352 7.231467 TGACCTGATGATGTACTAGCAGTATA 58.769 38.462 0.00 0.00 32.65 1.47
352 353 7.175119 TGACCTGATGATGTACTAGCAGTATAC 59.825 40.741 0.00 0.00 32.65 1.47
353 354 7.235079 ACCTGATGATGTACTAGCAGTATACT 58.765 38.462 0.00 0.00 32.65 2.12
354 355 8.383947 ACCTGATGATGTACTAGCAGTATACTA 58.616 37.037 4.74 0.00 32.65 1.82
355 356 8.670135 CCTGATGATGTACTAGCAGTATACTAC 58.330 40.741 4.74 0.00 32.65 2.73
356 357 8.252964 TGATGATGTACTAGCAGTATACTACG 57.747 38.462 4.74 0.00 32.65 3.51
357 358 7.876582 TGATGATGTACTAGCAGTATACTACGT 59.123 37.037 4.74 0.25 32.65 3.57
358 359 9.363763 GATGATGTACTAGCAGTATACTACGTA 57.636 37.037 4.74 0.00 32.65 3.57
359 360 8.526218 TGATGTACTAGCAGTATACTACGTAC 57.474 38.462 4.74 13.49 32.65 3.67
360 361 8.143835 TGATGTACTAGCAGTATACTACGTACA 58.856 37.037 23.36 23.36 37.90 2.90
361 362 8.893219 ATGTACTAGCAGTATACTACGTACAA 57.107 34.615 24.13 15.45 37.54 2.41
362 363 8.131455 TGTACTAGCAGTATACTACGTACAAC 57.869 38.462 21.18 11.10 34.73 3.32
363 364 7.981789 TGTACTAGCAGTATACTACGTACAACT 59.018 37.037 21.18 8.53 34.73 3.16
364 365 9.464714 GTACTAGCAGTATACTACGTACAACTA 57.535 37.037 4.74 0.00 32.65 2.24
365 366 8.359060 ACTAGCAGTATACTACGTACAACTAC 57.641 38.462 4.74 0.00 0.00 2.73
389 390 2.690778 GCTCACGTGCCCACCATTC 61.691 63.158 11.67 0.00 0.00 2.67
408 409 1.660575 GTCACACCCGTCACGTGAG 60.661 63.158 20.73 10.30 40.17 3.51
410 411 1.227147 CACACCCGTCACGTGAGTT 60.227 57.895 20.73 0.00 46.40 3.01
498 500 3.551890 CGATTCGATCCGATCAAAAGTGT 59.448 43.478 9.07 0.00 35.23 3.55
499 501 4.317418 CGATTCGATCCGATCAAAAGTGTC 60.317 45.833 9.07 0.00 35.23 3.67
501 503 3.250744 TCGATCCGATCAAAAGTGTCAC 58.749 45.455 9.07 0.00 0.00 3.67
503 505 3.600388 GATCCGATCAAAAGTGTCACCT 58.400 45.455 3.33 0.00 0.00 4.00
505 507 3.921677 TCCGATCAAAAGTGTCACCTAC 58.078 45.455 0.00 0.00 0.00 3.18
506 508 3.576982 TCCGATCAAAAGTGTCACCTACT 59.423 43.478 0.00 0.00 0.00 2.57
507 509 3.927142 CCGATCAAAAGTGTCACCTACTC 59.073 47.826 0.00 0.00 0.00 2.59
596 598 0.042794 CACCGTTGGTTCGTTCGTTC 60.043 55.000 0.00 0.00 31.02 3.95
654 660 2.202932 CTTCTGGCGGATGACGGG 60.203 66.667 3.18 0.00 44.51 5.28
683 689 1.134401 GGATCCATCTTTCCACGAGCA 60.134 52.381 6.95 0.00 31.99 4.26
684 690 1.936547 GATCCATCTTTCCACGAGCAC 59.063 52.381 0.00 0.00 0.00 4.40
685 691 0.036388 TCCATCTTTCCACGAGCACC 60.036 55.000 0.00 0.00 0.00 5.01
703 719 2.348888 CCCCTCGTAGCCGTTGAGT 61.349 63.158 0.00 0.00 35.01 3.41
819 852 0.540923 AATCTCACCTCAGCTCAGCC 59.459 55.000 0.00 0.00 0.00 4.85
926 984 2.487934 AGCTCTGCATAAATACCAGCG 58.512 47.619 0.00 0.00 0.00 5.18
978 1036 2.429930 CACCCGGAGCTCACCAAA 59.570 61.111 17.19 0.00 0.00 3.28
989 1047 0.037697 CTCACCAAACCATCCGTCGA 60.038 55.000 0.00 0.00 0.00 4.20
1215 1305 1.377333 GAAGGCTAACAAGGCGGCT 60.377 57.895 5.25 5.25 39.53 5.52
1240 1333 2.647949 GGGGAGGAGGGGGAGAAGA 61.648 68.421 0.00 0.00 0.00 2.87
1246 1339 0.692756 GGAGGGGGAGAAGAAGGAGG 60.693 65.000 0.00 0.00 0.00 4.30
1344 1437 1.227764 CATCCTCATCCAGTGCGGG 60.228 63.158 0.00 0.00 33.36 6.13
1347 1440 4.147449 CTCATCCAGTGCGGGCGA 62.147 66.667 0.00 0.00 34.36 5.54
1461 1554 2.043852 GAGGGCGACTGGGAGAGA 60.044 66.667 0.00 0.00 0.00 3.10
1800 1893 4.572571 AAGACGGCGGGGCAAACA 62.573 61.111 13.24 0.00 0.00 2.83
1938 2031 3.076032 AGCCCCAGAAGGTAAGAAACAAT 59.924 43.478 0.00 0.00 0.00 2.71
1949 2043 7.190920 AGGTAAGAAACAATCAAAGTTCGAG 57.809 36.000 0.00 0.00 0.00 4.04
1979 2073 3.827722 CCCTTCCTTTTGTAACTCCACA 58.172 45.455 0.00 0.00 0.00 4.17
1988 2082 7.776030 TCCTTTTGTAACTCCACATCTTAACAA 59.224 33.333 0.00 0.00 0.00 2.83
2120 2216 1.079490 AGAAGGTGGAGGAGACCATCA 59.921 52.381 0.00 0.00 42.92 3.07
2125 2221 1.065199 GTGGAGGAGACCATCATTGCA 60.065 52.381 0.00 0.00 42.17 4.08
3030 3127 6.939551 TGTAGTCTTGCTAACGTTATCAAC 57.060 37.500 18.02 11.77 0.00 3.18
3062 3165 7.309744 CCTCATTATTTGGGAGCAAACTTGTAA 60.310 37.037 0.00 0.00 0.00 2.41
3066 3169 3.306472 TGGGAGCAAACTTGTAACCTT 57.694 42.857 0.00 0.00 0.00 3.50
3073 3176 7.430441 GGAGCAAACTTGTAACCTTTATTCAA 58.570 34.615 0.00 0.00 0.00 2.69
3074 3177 7.381408 GGAGCAAACTTGTAACCTTTATTCAAC 59.619 37.037 0.00 0.00 0.00 3.18
3076 3179 7.069455 AGCAAACTTGTAACCTTTATTCAACCT 59.931 33.333 0.00 0.00 0.00 3.50
3077 3180 7.169140 GCAAACTTGTAACCTTTATTCAACCTG 59.831 37.037 0.00 0.00 0.00 4.00
3078 3181 7.891498 AACTTGTAACCTTTATTCAACCTGT 57.109 32.000 0.00 0.00 0.00 4.00
3085 3188 6.590234 ACCTTTATTCAACCTGTTTGATCC 57.410 37.500 0.00 0.00 43.99 3.36
3088 3191 5.873179 TTATTCAACCTGTTTGATCCGAC 57.127 39.130 0.00 0.00 43.99 4.79
3093 3196 1.200483 CCTGTTTGATCCGACGATCG 58.800 55.000 14.88 14.88 46.89 3.69
3102 3205 2.719979 CGACGATCGGTTCCGGAT 59.280 61.111 20.98 0.00 36.00 4.18
3104 3207 0.308684 CGACGATCGGTTCCGGATTA 59.691 55.000 20.98 0.00 36.00 1.75
3105 3208 1.763634 GACGATCGGTTCCGGATTAC 58.236 55.000 20.98 0.00 0.00 1.89
3106 3209 0.386838 ACGATCGGTTCCGGATTACC 59.613 55.000 20.98 14.45 0.00 2.85
3145 3324 1.999048 ATGCAACACGATTTGGCATG 58.001 45.000 0.00 0.00 0.00 4.06
3235 3685 5.119898 GTCTGTGCTATTCTTGAACTCACAG 59.880 44.000 21.65 21.65 46.52 3.66
3338 3880 8.706492 CAATTTTTGCATCTGTATTACATGGT 57.294 30.769 0.00 0.00 0.00 3.55
3379 3921 0.109781 AGCATTAAAACCTGCGCGTG 60.110 50.000 8.43 0.36 43.17 5.34
3380 3922 0.109964 GCATTAAAACCTGCGCGTGA 60.110 50.000 8.43 0.00 0.00 4.35
3381 3923 1.602191 CATTAAAACCTGCGCGTGAC 58.398 50.000 8.43 0.00 0.00 3.67
3382 3924 1.196808 CATTAAAACCTGCGCGTGACT 59.803 47.619 8.43 0.00 0.00 3.41
3383 3925 0.584396 TTAAAACCTGCGCGTGACTG 59.416 50.000 8.43 0.00 0.00 3.51
3384 3926 0.249531 TAAAACCTGCGCGTGACTGA 60.250 50.000 8.43 0.00 0.00 3.41
3385 3927 1.498865 AAAACCTGCGCGTGACTGAG 61.499 55.000 8.43 0.00 0.00 3.35
3389 3931 2.724708 CTGCGCGTGACTGAGCTTC 61.725 63.158 8.43 0.00 35.53 3.86
3390 3932 3.482783 GCGCGTGACTGAGCTTCC 61.483 66.667 8.43 0.00 0.00 3.46
3391 3933 2.259818 CGCGTGACTGAGCTTCCT 59.740 61.111 0.00 0.00 0.00 3.36
3392 3934 1.803519 CGCGTGACTGAGCTTCCTC 60.804 63.158 0.00 0.00 38.62 3.71
3393 3935 1.446966 GCGTGACTGAGCTTCCTCC 60.447 63.158 0.00 0.00 37.29 4.30
3394 3936 1.882989 GCGTGACTGAGCTTCCTCCT 61.883 60.000 0.00 0.00 37.29 3.69
3401 4462 1.739562 GAGCTTCCTCCTGTGTGCG 60.740 63.158 0.00 0.00 31.68 5.34
3403 4464 1.078848 GCTTCCTCCTGTGTGCGAT 60.079 57.895 0.00 0.00 0.00 4.58
3407 4468 0.396435 TCCTCCTGTGTGCGATTGTT 59.604 50.000 0.00 0.00 0.00 2.83
3427 4492 6.299805 TGTTCATGAGCTACCTAATCTGTT 57.700 37.500 11.09 0.00 0.00 3.16
3428 4493 7.418337 TGTTCATGAGCTACCTAATCTGTTA 57.582 36.000 11.09 0.00 0.00 2.41
3434 4499 4.880164 AGCTACCTAATCTGTTACAGGGA 58.120 43.478 12.79 0.00 31.51 4.20
3449 4514 0.617413 AGGGAGACATCTGTTGCAGG 59.383 55.000 0.00 0.00 31.51 4.85
3454 4520 0.257039 GACATCTGTTGCAGGGGGAT 59.743 55.000 0.00 0.00 31.51 3.85
3457 4523 3.326521 ACATCTGTTGCAGGGGGATATA 58.673 45.455 0.00 0.00 31.51 0.86
3458 4524 3.721575 ACATCTGTTGCAGGGGGATATAA 59.278 43.478 0.00 0.00 31.51 0.98
3466 4532 1.705186 CAGGGGGATATAAGGTGTGGG 59.295 57.143 0.00 0.00 0.00 4.61
3469 4535 2.699281 GGGGGATATAAGGTGTGGGTCT 60.699 54.545 0.00 0.00 0.00 3.85
3470 4536 2.372172 GGGGATATAAGGTGTGGGTCTG 59.628 54.545 0.00 0.00 0.00 3.51
3473 4539 4.228824 GGATATAAGGTGTGGGTCTGGTA 58.771 47.826 0.00 0.00 0.00 3.25
3477 4543 0.252103 AGGTGTGGGTCTGGTACGAT 60.252 55.000 0.00 0.00 0.00 3.73
3478 4544 0.108329 GGTGTGGGTCTGGTACGATG 60.108 60.000 0.00 0.00 0.00 3.84
3479 4545 0.108329 GTGTGGGTCTGGTACGATGG 60.108 60.000 0.00 0.00 0.00 3.51
3484 4565 2.574369 TGGGTCTGGTACGATGGAAAAT 59.426 45.455 0.00 0.00 0.00 1.82
3486 4567 3.626217 GGGTCTGGTACGATGGAAAATTC 59.374 47.826 0.00 0.00 0.00 2.17
3488 4569 4.094442 GGTCTGGTACGATGGAAAATTCAC 59.906 45.833 0.00 0.00 0.00 3.18
3493 4574 4.626604 GGTACGATGGAAAATTCACGTACA 59.373 41.667 28.14 10.01 45.63 2.90
3502 4583 8.211116 TGGAAAATTCACGTACACTTTTCTAA 57.789 30.769 17.11 8.95 36.52 2.10
3508 4589 9.445786 AATTCACGTACACTTTTCTAAAATGTG 57.554 29.630 13.67 13.67 35.31 3.21
3509 4590 7.773864 TCACGTACACTTTTCTAAAATGTGA 57.226 32.000 19.26 8.35 34.32 3.58
3510 4591 7.623770 TCACGTACACTTTTCTAAAATGTGAC 58.376 34.615 19.26 13.43 34.32 3.67
3512 4593 6.256321 ACGTACACTTTTCTAAAATGTGACGT 59.744 34.615 23.39 23.39 37.87 4.34
3513 4594 7.434897 ACGTACACTTTTCTAAAATGTGACGTA 59.565 33.333 25.18 11.32 38.82 3.57
3514 4595 8.268052 CGTACACTTTTCTAAAATGTGACGTAA 58.732 33.333 19.26 0.00 34.32 3.18
3553 4690 9.974980 TTGAAACAATATTACCAAGTTCTTTCC 57.025 29.630 0.00 0.00 0.00 3.13
3567 4704 8.764287 CCAAGTTCTTTCCATGTAACAAAAATC 58.236 33.333 0.00 0.00 0.00 2.17
3574 4711 5.782047 TCCATGTAACAAAAATCCTGCAAG 58.218 37.500 0.00 0.00 0.00 4.01
3575 4712 5.538053 TCCATGTAACAAAAATCCTGCAAGA 59.462 36.000 0.00 0.00 34.07 3.02
3576 4713 6.211184 TCCATGTAACAAAAATCCTGCAAGAT 59.789 34.615 0.00 0.00 34.07 2.40
3577 4714 6.875195 CCATGTAACAAAAATCCTGCAAGATT 59.125 34.615 4.65 4.65 38.11 2.40
3617 4756 5.062058 ACGAAAATTGTTCACTTGCAACAAG 59.938 36.000 6.99 5.80 44.77 3.16
3621 4760 1.063912 TGTTCACTTGCAACAAGCTCG 59.936 47.619 7.23 0.00 45.94 5.03
3625 4764 3.599792 CTTGCAACAAGCTCGGCGG 62.600 63.158 7.21 0.00 45.94 6.13
3643 4782 1.889829 CGGAAAGCCATGGGTTGTTTA 59.110 47.619 28.98 0.00 35.87 2.01
3647 4786 3.866883 AAGCCATGGGTTGTTTATTCG 57.133 42.857 27.86 0.00 34.29 3.34
3650 4789 3.018149 GCCATGGGTTGTTTATTCGGTA 58.982 45.455 15.13 0.00 0.00 4.02
3652 4791 4.499019 GCCATGGGTTGTTTATTCGGTATG 60.499 45.833 15.13 0.00 0.00 2.39
3661 4800 6.978343 TGTTTATTCGGTATGAACTCTTGG 57.022 37.500 4.42 0.00 40.00 3.61
3665 4804 3.627395 TCGGTATGAACTCTTGGCAAT 57.373 42.857 0.00 0.00 0.00 3.56
3671 4810 6.093495 CGGTATGAACTCTTGGCAATCTAAAA 59.907 38.462 0.00 0.00 0.00 1.52
3680 4819 6.045955 TCTTGGCAATCTAAAACCAACAAAC 58.954 36.000 0.00 0.00 37.26 2.93
3686 4825 7.307337 GGCAATCTAAAACCAACAAACTTGATG 60.307 37.037 0.00 0.00 0.00 3.07
3697 4836 4.397420 ACAAACTTGATGGTCACATAGCA 58.603 39.130 0.00 0.00 37.47 3.49
3706 4845 2.284190 GGTCACATAGCAGAGGAAAGC 58.716 52.381 0.00 0.00 0.00 3.51
3709 4848 1.669779 CACATAGCAGAGGAAAGCAGC 59.330 52.381 0.00 0.00 0.00 5.25
3719 4858 1.688211 GAAAGCAGCCCCTCTCCTT 59.312 57.895 0.00 0.00 0.00 3.36
3726 4865 1.065564 CAGCCCCTCTCCTTCAAAGAG 60.066 57.143 0.00 0.00 40.01 2.85
3737 4876 3.458118 TCCTTCAAAGAGTGGAAGTTGGA 59.542 43.478 0.00 0.00 39.04 3.53
3766 4905 3.717707 CAACACCTCAACTTCTCGAGAA 58.282 45.455 25.57 25.57 0.00 2.87
3769 4908 3.637229 ACACCTCAACTTCTCGAGAAAGA 59.363 43.478 26.87 21.79 33.07 2.52
3770 4909 4.233789 CACCTCAACTTCTCGAGAAAGAG 58.766 47.826 28.05 28.05 39.52 2.85
3776 4915 3.502356 ACTTCTCGAGAAAGAGGGAAGT 58.498 45.455 26.87 16.34 38.71 3.01
3778 4917 3.156288 TCTCGAGAAAGAGGGAAGTGA 57.844 47.619 14.01 0.00 38.71 3.41
3805 4944 0.033796 ATGAAGGGGTCATGGCAGTG 60.034 55.000 0.00 0.00 45.69 3.66
3811 4950 0.811281 GGGTCATGGCAGTGCTAAAC 59.189 55.000 16.11 11.54 0.00 2.01
3812 4951 0.447801 GGTCATGGCAGTGCTAAACG 59.552 55.000 16.11 2.28 0.00 3.60
3817 4956 1.225855 TGGCAGTGCTAAACGAAGTG 58.774 50.000 16.11 0.00 45.00 3.16
3818 4957 1.226746 GGCAGTGCTAAACGAAGTGT 58.773 50.000 16.11 0.00 45.00 3.55
3820 4959 1.864711 GCAGTGCTAAACGAAGTGTCA 59.135 47.619 8.18 0.00 45.00 3.58
3821 4960 2.480419 GCAGTGCTAAACGAAGTGTCAT 59.520 45.455 8.18 0.00 45.00 3.06
3822 4961 3.423645 GCAGTGCTAAACGAAGTGTCATC 60.424 47.826 8.18 0.00 45.00 2.92
3830 4969 6.910433 GCTAAACGAAGTGTCATCAAAGAAAA 59.090 34.615 0.00 0.00 45.00 2.29
3832 4971 5.169836 ACGAAGTGTCATCAAAGAAAACC 57.830 39.130 0.00 0.00 42.51 3.27
3835 4974 2.884639 AGTGTCATCAAAGAAAACCCCG 59.115 45.455 0.00 0.00 0.00 5.73
3840 4979 2.519780 AAAGAAAACCCCGCGCCA 60.520 55.556 0.00 0.00 0.00 5.69
3844 4983 1.227292 GAAAACCCCGCGCCAAAAA 60.227 52.632 0.00 0.00 0.00 1.94
3868 5010 2.100631 GTGGAGTGGCAATCCGTCG 61.101 63.158 26.87 0.00 39.91 5.12
3869 5011 3.195698 GGAGTGGCAATCCGTCGC 61.196 66.667 19.17 0.00 34.14 5.19
3874 5016 0.318275 GTGGCAATCCGTCGCAAAAA 60.318 50.000 0.00 0.00 34.14 1.94
3875 5017 0.318275 TGGCAATCCGTCGCAAAAAC 60.318 50.000 0.00 0.00 34.14 2.43
3876 5018 0.039527 GGCAATCCGTCGCAAAAACT 60.040 50.000 0.00 0.00 0.00 2.66
3877 5019 1.327507 GCAATCCGTCGCAAAAACTC 58.672 50.000 0.00 0.00 0.00 3.01
3878 5020 1.069227 GCAATCCGTCGCAAAAACTCT 60.069 47.619 0.00 0.00 0.00 3.24
3879 5021 2.604614 GCAATCCGTCGCAAAAACTCTT 60.605 45.455 0.00 0.00 0.00 2.85
3880 5022 2.969443 ATCCGTCGCAAAAACTCTTG 57.031 45.000 0.00 0.00 0.00 3.02
3881 5023 1.942677 TCCGTCGCAAAAACTCTTGA 58.057 45.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.123928 CTTAATGTCCCTCTCGCCCT 58.876 55.000 0.00 0.00 0.00 5.19
1 2 1.120530 TCTTAATGTCCCTCTCGCCC 58.879 55.000 0.00 0.00 0.00 6.13
2 3 2.981859 TTCTTAATGTCCCTCTCGCC 57.018 50.000 0.00 0.00 0.00 5.54
3 4 3.062234 CGTTTTCTTAATGTCCCTCTCGC 59.938 47.826 0.00 0.00 0.00 5.03
4 5 3.617263 CCGTTTTCTTAATGTCCCTCTCG 59.383 47.826 0.00 0.00 0.00 4.04
5 6 4.576879 ACCGTTTTCTTAATGTCCCTCTC 58.423 43.478 0.00 0.00 0.00 3.20
6 7 4.041198 TGACCGTTTTCTTAATGTCCCTCT 59.959 41.667 0.00 0.00 0.00 3.69
7 8 4.320870 TGACCGTTTTCTTAATGTCCCTC 58.679 43.478 0.00 0.00 0.00 4.30
8 9 4.360951 TGACCGTTTTCTTAATGTCCCT 57.639 40.909 0.00 0.00 0.00 4.20
9 10 4.517832 AGTTGACCGTTTTCTTAATGTCCC 59.482 41.667 0.00 0.00 0.00 4.46
10 11 5.684550 AGTTGACCGTTTTCTTAATGTCC 57.315 39.130 0.00 0.00 0.00 4.02
11 12 5.912955 CCAAGTTGACCGTTTTCTTAATGTC 59.087 40.000 3.87 0.00 0.00 3.06
12 13 5.591067 TCCAAGTTGACCGTTTTCTTAATGT 59.409 36.000 3.87 0.00 0.00 2.71
13 14 6.067263 TCCAAGTTGACCGTTTTCTTAATG 57.933 37.500 3.87 0.00 0.00 1.90
14 15 5.240844 CCTCCAAGTTGACCGTTTTCTTAAT 59.759 40.000 3.87 0.00 0.00 1.40
15 16 4.577283 CCTCCAAGTTGACCGTTTTCTTAA 59.423 41.667 3.87 0.00 0.00 1.85
16 17 4.131596 CCTCCAAGTTGACCGTTTTCTTA 58.868 43.478 3.87 0.00 0.00 2.10
17 18 2.949644 CCTCCAAGTTGACCGTTTTCTT 59.050 45.455 3.87 0.00 0.00 2.52
18 19 2.572290 CCTCCAAGTTGACCGTTTTCT 58.428 47.619 3.87 0.00 0.00 2.52
19 20 1.001706 GCCTCCAAGTTGACCGTTTTC 60.002 52.381 3.87 0.00 0.00 2.29
20 21 1.029681 GCCTCCAAGTTGACCGTTTT 58.970 50.000 3.87 0.00 0.00 2.43
21 22 0.182775 AGCCTCCAAGTTGACCGTTT 59.817 50.000 3.87 0.00 0.00 3.60
22 23 0.250338 GAGCCTCCAAGTTGACCGTT 60.250 55.000 3.87 0.00 0.00 4.44
23 24 1.122019 AGAGCCTCCAAGTTGACCGT 61.122 55.000 3.87 0.00 0.00 4.83
24 25 0.895530 TAGAGCCTCCAAGTTGACCG 59.104 55.000 3.87 0.00 0.00 4.79
25 26 2.501723 TCATAGAGCCTCCAAGTTGACC 59.498 50.000 3.87 0.00 0.00 4.02
26 27 3.895232 TCATAGAGCCTCCAAGTTGAC 57.105 47.619 3.87 0.00 0.00 3.18
27 28 3.840666 ACTTCATAGAGCCTCCAAGTTGA 59.159 43.478 3.87 0.00 0.00 3.18
28 29 4.213564 ACTTCATAGAGCCTCCAAGTTG 57.786 45.455 0.00 0.00 0.00 3.16
29 30 4.407296 CCTACTTCATAGAGCCTCCAAGTT 59.593 45.833 2.44 0.00 31.83 2.66
30 31 3.964031 CCTACTTCATAGAGCCTCCAAGT 59.036 47.826 0.00 0.00 31.83 3.16
31 32 4.219115 TCCTACTTCATAGAGCCTCCAAG 58.781 47.826 0.00 0.00 31.83 3.61
32 33 4.265856 TCCTACTTCATAGAGCCTCCAA 57.734 45.455 0.00 0.00 31.83 3.53
33 34 3.973472 TCCTACTTCATAGAGCCTCCA 57.027 47.619 0.00 0.00 31.83 3.86
34 35 3.576550 CCTTCCTACTTCATAGAGCCTCC 59.423 52.174 0.00 0.00 31.83 4.30
35 36 3.576550 CCCTTCCTACTTCATAGAGCCTC 59.423 52.174 0.00 0.00 31.83 4.70
36 37 3.207777 TCCCTTCCTACTTCATAGAGCCT 59.792 47.826 0.00 0.00 31.83 4.58
37 38 3.576550 CTCCCTTCCTACTTCATAGAGCC 59.423 52.174 0.00 0.00 31.83 4.70
38 39 3.006430 GCTCCCTTCCTACTTCATAGAGC 59.994 52.174 0.00 0.00 37.64 4.09
39 40 4.479158 AGCTCCCTTCCTACTTCATAGAG 58.521 47.826 0.00 0.00 31.83 2.43
40 41 4.544564 AGCTCCCTTCCTACTTCATAGA 57.455 45.455 0.00 0.00 31.83 1.98
41 42 5.129485 TGAAAGCTCCCTTCCTACTTCATAG 59.871 44.000 0.00 0.00 0.00 2.23
42 43 5.030147 TGAAAGCTCCCTTCCTACTTCATA 58.970 41.667 0.00 0.00 0.00 2.15
43 44 3.846588 TGAAAGCTCCCTTCCTACTTCAT 59.153 43.478 0.00 0.00 0.00 2.57
44 45 3.248024 TGAAAGCTCCCTTCCTACTTCA 58.752 45.455 0.00 0.00 0.00 3.02
45 46 3.867857 CTGAAAGCTCCCTTCCTACTTC 58.132 50.000 0.00 0.00 0.00 3.01
46 47 3.990959 CTGAAAGCTCCCTTCCTACTT 57.009 47.619 0.00 0.00 0.00 2.24
60 61 2.555757 CAAGAGGGACCAAAGCTGAAAG 59.444 50.000 0.00 0.00 0.00 2.62
61 62 2.091885 ACAAGAGGGACCAAAGCTGAAA 60.092 45.455 0.00 0.00 0.00 2.69
62 63 1.494721 ACAAGAGGGACCAAAGCTGAA 59.505 47.619 0.00 0.00 0.00 3.02
63 64 1.140312 ACAAGAGGGACCAAAGCTGA 58.860 50.000 0.00 0.00 0.00 4.26
64 65 1.986882 AACAAGAGGGACCAAAGCTG 58.013 50.000 0.00 0.00 0.00 4.24
65 66 2.310538 CAAACAAGAGGGACCAAAGCT 58.689 47.619 0.00 0.00 0.00 3.74
66 67 2.031870 ACAAACAAGAGGGACCAAAGC 58.968 47.619 0.00 0.00 0.00 3.51
67 68 4.736126 AAACAAACAAGAGGGACCAAAG 57.264 40.909 0.00 0.00 0.00 2.77
68 69 4.403113 GGTAAACAAACAAGAGGGACCAAA 59.597 41.667 0.00 0.00 0.00 3.28
69 70 3.955551 GGTAAACAAACAAGAGGGACCAA 59.044 43.478 0.00 0.00 0.00 3.67
70 71 3.203487 AGGTAAACAAACAAGAGGGACCA 59.797 43.478 0.00 0.00 0.00 4.02
71 72 3.828921 AGGTAAACAAACAAGAGGGACC 58.171 45.455 0.00 0.00 0.00 4.46
72 73 5.048921 GCTAAGGTAAACAAACAAGAGGGAC 60.049 44.000 0.00 0.00 0.00 4.46
73 74 5.067954 GCTAAGGTAAACAAACAAGAGGGA 58.932 41.667 0.00 0.00 0.00 4.20
74 75 4.217767 GGCTAAGGTAAACAAACAAGAGGG 59.782 45.833 0.00 0.00 0.00 4.30
75 76 4.825085 TGGCTAAGGTAAACAAACAAGAGG 59.175 41.667 0.00 0.00 0.00 3.69
76 77 6.381801 CATGGCTAAGGTAAACAAACAAGAG 58.618 40.000 0.00 0.00 0.00 2.85
77 78 5.242838 CCATGGCTAAGGTAAACAAACAAGA 59.757 40.000 0.00 0.00 0.00 3.02
78 79 5.242838 TCCATGGCTAAGGTAAACAAACAAG 59.757 40.000 6.96 0.00 0.00 3.16
79 80 5.141182 TCCATGGCTAAGGTAAACAAACAA 58.859 37.500 6.96 0.00 0.00 2.83
80 81 4.730966 TCCATGGCTAAGGTAAACAAACA 58.269 39.130 6.96 0.00 0.00 2.83
81 82 4.765339 ACTCCATGGCTAAGGTAAACAAAC 59.235 41.667 6.96 0.00 0.00 2.93
82 83 4.993028 ACTCCATGGCTAAGGTAAACAAA 58.007 39.130 6.96 0.00 0.00 2.83
83 84 4.288626 AGACTCCATGGCTAAGGTAAACAA 59.711 41.667 6.96 0.00 27.54 2.83
84 85 3.844211 AGACTCCATGGCTAAGGTAAACA 59.156 43.478 6.96 0.00 27.54 2.83
85 86 4.162509 AGAGACTCCATGGCTAAGGTAAAC 59.837 45.833 6.96 0.00 31.30 2.01
86 87 4.162320 CAGAGACTCCATGGCTAAGGTAAA 59.838 45.833 6.96 0.00 31.30 2.01
87 88 3.706594 CAGAGACTCCATGGCTAAGGTAA 59.293 47.826 6.96 0.00 31.30 2.85
88 89 3.300388 CAGAGACTCCATGGCTAAGGTA 58.700 50.000 6.96 0.00 31.30 3.08
89 90 2.114616 CAGAGACTCCATGGCTAAGGT 58.885 52.381 6.96 0.27 31.30 3.50
90 91 2.114616 ACAGAGACTCCATGGCTAAGG 58.885 52.381 6.96 0.00 31.30 2.69
91 92 2.741228 GCACAGAGACTCCATGGCTAAG 60.741 54.545 6.96 1.50 31.30 2.18
92 93 1.208052 GCACAGAGACTCCATGGCTAA 59.792 52.381 6.96 0.00 31.30 3.09
93 94 0.826715 GCACAGAGACTCCATGGCTA 59.173 55.000 6.96 0.00 31.30 3.93
94 95 1.601171 GCACAGAGACTCCATGGCT 59.399 57.895 6.96 0.00 36.16 4.75
95 96 1.451028 GGCACAGAGACTCCATGGC 60.451 63.158 6.96 12.58 0.00 4.40
96 97 1.985614 TGGCACAGAGACTCCATGG 59.014 57.895 4.97 4.97 0.00 3.66
108 109 6.658849 AGGTAACAAATATATGTCTGGCACA 58.341 36.000 0.00 0.00 38.37 4.57
109 110 6.992715 AGAGGTAACAAATATATGTCTGGCAC 59.007 38.462 0.00 0.00 41.41 5.01
110 111 7.136822 AGAGGTAACAAATATATGTCTGGCA 57.863 36.000 0.00 0.00 41.41 4.92
111 112 7.499232 ACAAGAGGTAACAAATATATGTCTGGC 59.501 37.037 0.00 0.00 41.41 4.85
112 113 8.830580 CACAAGAGGTAACAAATATATGTCTGG 58.169 37.037 0.00 0.00 41.41 3.86
113 114 9.599866 TCACAAGAGGTAACAAATATATGTCTG 57.400 33.333 0.00 0.00 41.41 3.51
119 120 9.444600 GGTTCTTCACAAGAGGTAACAAATATA 57.555 33.333 0.00 0.00 39.03 0.86
120 121 7.119262 CGGTTCTTCACAAGAGGTAACAAATAT 59.881 37.037 0.00 0.00 39.03 1.28
121 122 6.425721 CGGTTCTTCACAAGAGGTAACAAATA 59.574 38.462 0.00 0.00 39.03 1.40
122 123 5.238650 CGGTTCTTCACAAGAGGTAACAAAT 59.761 40.000 0.00 0.00 39.03 2.32
123 124 4.573201 CGGTTCTTCACAAGAGGTAACAAA 59.427 41.667 0.00 0.00 39.03 2.83
124 125 4.124238 CGGTTCTTCACAAGAGGTAACAA 58.876 43.478 0.00 0.00 39.03 2.83
125 126 3.493699 CCGGTTCTTCACAAGAGGTAACA 60.494 47.826 0.00 0.00 39.03 2.41
126 127 3.064931 CCGGTTCTTCACAAGAGGTAAC 58.935 50.000 0.00 0.00 39.03 2.50
127 128 2.549349 GCCGGTTCTTCACAAGAGGTAA 60.549 50.000 1.90 0.00 39.03 2.85
128 129 1.001633 GCCGGTTCTTCACAAGAGGTA 59.998 52.381 1.90 0.00 39.03 3.08
129 130 0.250338 GCCGGTTCTTCACAAGAGGT 60.250 55.000 1.90 0.00 39.03 3.85
130 131 0.250295 TGCCGGTTCTTCACAAGAGG 60.250 55.000 1.90 0.00 39.03 3.69
131 132 1.532868 CTTGCCGGTTCTTCACAAGAG 59.467 52.381 1.90 0.00 40.06 2.85
132 133 1.593196 CTTGCCGGTTCTTCACAAGA 58.407 50.000 1.90 0.00 40.06 3.02
133 134 0.040067 GCTTGCCGGTTCTTCACAAG 60.040 55.000 1.90 7.35 40.49 3.16
134 135 1.452145 GGCTTGCCGGTTCTTCACAA 61.452 55.000 1.90 0.00 0.00 3.33
135 136 1.896660 GGCTTGCCGGTTCTTCACA 60.897 57.895 1.90 0.00 0.00 3.58
136 137 1.856265 CTGGCTTGCCGGTTCTTCAC 61.856 60.000 12.07 0.00 0.00 3.18
137 138 1.600636 CTGGCTTGCCGGTTCTTCA 60.601 57.895 12.07 0.00 0.00 3.02
144 145 2.182537 GAATTGCTGGCTTGCCGG 59.817 61.111 15.65 15.65 0.00 6.13
165 166 2.073816 CAGTGAATGGTGGTACGTTCC 58.926 52.381 3.92 3.92 35.91 3.62
302 303 4.060900 TGATAGATTTCGCTGATGCCTTC 58.939 43.478 0.00 0.00 35.36 3.46
356 357 0.169672 TGAGCTCGCCGTAGTTGTAC 59.830 55.000 9.64 0.00 0.00 2.90
357 358 0.169672 GTGAGCTCGCCGTAGTTGTA 59.830 55.000 16.69 0.00 0.00 2.41
358 359 1.080705 GTGAGCTCGCCGTAGTTGT 60.081 57.895 16.69 0.00 0.00 3.32
359 360 2.152699 CGTGAGCTCGCCGTAGTTG 61.153 63.158 21.21 1.71 0.00 3.16
360 361 2.178521 CGTGAGCTCGCCGTAGTT 59.821 61.111 21.21 0.00 0.00 2.24
361 362 3.054503 ACGTGAGCTCGCCGTAGT 61.055 61.111 24.40 13.30 32.22 2.73
362 363 2.577112 CACGTGAGCTCGCCGTAG 60.577 66.667 24.93 17.21 32.81 3.51
363 364 4.771356 GCACGTGAGCTCGCCGTA 62.771 66.667 24.93 0.00 32.81 4.02
369 370 3.612247 ATGGTGGGCACGTGAGCTC 62.612 63.158 22.23 6.82 34.90 4.09
370 371 3.196207 AATGGTGGGCACGTGAGCT 62.196 57.895 22.23 0.00 34.17 4.09
408 409 0.878961 GGTCAGACCGTGTCACCAAC 60.879 60.000 3.05 0.00 34.60 3.77
410 411 2.504274 GGGTCAGACCGTGTCACCA 61.504 63.158 13.80 0.00 39.83 4.17
498 500 0.618981 TCTCCTCGCTGAGTAGGTGA 59.381 55.000 3.47 3.95 34.00 4.02
499 501 1.021202 CTCTCCTCGCTGAGTAGGTG 58.979 60.000 3.47 1.91 34.30 4.00
501 503 0.106918 ACCTCTCCTCGCTGAGTAGG 60.107 60.000 13.05 13.05 36.53 3.18
503 505 0.462225 CGACCTCTCCTCGCTGAGTA 60.462 60.000 5.15 0.00 33.93 2.59
505 507 0.817634 ATCGACCTCTCCTCGCTGAG 60.818 60.000 0.00 0.00 0.00 3.35
506 508 1.098129 CATCGACCTCTCCTCGCTGA 61.098 60.000 0.00 0.00 30.58 4.26
507 509 1.358402 CATCGACCTCTCCTCGCTG 59.642 63.158 0.00 0.00 0.00 5.18
577 579 0.042794 GAACGAACGAACCAACGGTG 60.043 55.000 0.00 0.00 35.34 4.94
578 580 1.481819 CGAACGAACGAACCAACGGT 61.482 55.000 0.14 0.00 37.65 4.83
596 598 7.358600 GCCCGGTAAAATTAGTTTTTCTTTTCG 60.359 37.037 0.00 0.00 38.47 3.46
601 603 4.616604 GCGCCCGGTAAAATTAGTTTTTCT 60.617 41.667 0.00 0.00 38.47 2.52
602 604 3.609373 GCGCCCGGTAAAATTAGTTTTTC 59.391 43.478 0.00 0.00 38.47 2.29
603 605 3.005578 TGCGCCCGGTAAAATTAGTTTTT 59.994 39.130 4.18 0.00 40.59 1.94
654 660 2.165357 AAGATGGATCCCTTTTGGCC 57.835 50.000 9.90 0.00 38.58 5.36
683 689 3.387947 CAACGGCTACGAGGGGGT 61.388 66.667 0.00 0.00 44.60 4.95
684 690 3.072468 TCAACGGCTACGAGGGGG 61.072 66.667 0.00 0.00 44.60 5.40
685 691 2.280823 GACTCAACGGCTACGAGGGG 62.281 65.000 0.00 0.00 44.60 4.79
703 719 2.435234 CCGCCGGGATTCAAACGA 60.435 61.111 2.18 0.00 34.06 3.85
732 748 1.805869 CTCCGATTGGCTCATCATCC 58.194 55.000 0.00 0.00 34.14 3.51
780 813 0.101399 TGAAATCCTCTCTCGCTCGC 59.899 55.000 0.00 0.00 0.00 5.03
783 816 4.161189 TGAGATTTGAAATCCTCTCTCGCT 59.839 41.667 13.88 0.00 36.07 4.93
978 1036 2.181584 GACTCAGTCGACGGATGGT 58.818 57.895 18.73 13.85 0.00 3.55
1232 1325 1.681486 CGCCTCCTCCTTCTTCTCCC 61.681 65.000 0.00 0.00 0.00 4.30
1234 1327 0.744281 CTCGCCTCCTCCTTCTTCTC 59.256 60.000 0.00 0.00 0.00 2.87
1359 1452 3.437795 GTCTCGCTCCCGGACGAA 61.438 66.667 0.73 0.00 37.94 3.85
1641 1734 0.178301 GAACGGAGACCATCTTCCCC 59.822 60.000 0.00 0.00 0.00 4.81
1938 2031 3.002553 GGGCGTTAAAACTCGAACTTTGA 59.997 43.478 2.44 0.00 0.00 2.69
1949 2043 4.049546 ACAAAAGGAAGGGCGTTAAAAC 57.950 40.909 0.00 0.00 0.00 2.43
1979 2073 2.550978 CGGCTGATCGGTTGTTAAGAT 58.449 47.619 2.89 0.00 0.00 2.40
1988 2082 2.244117 ATTGTGAGCGGCTGATCGGT 62.244 55.000 7.50 0.00 43.85 4.69
2106 2202 1.211212 CTGCAATGATGGTCTCCTCCA 59.789 52.381 0.00 0.00 42.01 3.86
2245 2341 1.675219 GTACAAGCCGGGGTTCTGA 59.325 57.895 8.83 0.00 0.00 3.27
2887 2983 6.070938 CCATCTCATACATCTTGCCTGATCTA 60.071 42.308 0.00 0.00 0.00 1.98
2936 3032 0.537143 ACCGTGAAAGCAGCAATCCA 60.537 50.000 0.00 0.00 0.00 3.41
3030 3127 3.206150 CTCCCAAATAATGAGGTCCACG 58.794 50.000 0.00 0.00 0.00 4.94
3073 3176 2.295253 GATCGTCGGATCAAACAGGT 57.705 50.000 0.00 0.00 46.81 4.00
3085 3188 0.308684 TAATCCGGAACCGATCGTCG 59.691 55.000 9.01 11.65 42.83 5.12
3088 3191 3.190337 GGTAATCCGGAACCGATCG 57.810 57.895 9.01 8.51 42.83 3.69
3101 3204 3.054361 AGCATCAGAAACCTTCCGGTAAT 60.054 43.478 0.00 0.00 44.73 1.89
3102 3205 2.304761 AGCATCAGAAACCTTCCGGTAA 59.695 45.455 0.00 0.00 44.73 2.85
3105 3208 1.826385 AAGCATCAGAAACCTTCCGG 58.174 50.000 0.00 0.00 0.00 5.14
3106 3209 4.731773 GCATAAAGCATCAGAAACCTTCCG 60.732 45.833 0.00 0.00 44.79 4.30
3135 3314 1.400494 GGGACACGTACATGCCAAATC 59.600 52.381 0.00 0.00 0.00 2.17
3145 3324 4.122046 ACACTAACTTTTGGGACACGTAC 58.878 43.478 0.00 0.00 39.29 3.67
3206 3385 3.329386 TCAAGAATAGCACAGACAGCAC 58.671 45.455 0.00 0.00 0.00 4.40
3207 3386 3.683365 TCAAGAATAGCACAGACAGCA 57.317 42.857 0.00 0.00 0.00 4.41
3208 3387 3.999663 AGTTCAAGAATAGCACAGACAGC 59.000 43.478 0.00 0.00 0.00 4.40
3209 3388 5.119898 GTGAGTTCAAGAATAGCACAGACAG 59.880 44.000 0.00 0.00 0.00 3.51
3212 3391 5.213891 TGTGAGTTCAAGAATAGCACAGA 57.786 39.130 0.00 0.00 31.88 3.41
3235 3685 0.541863 TCGATCCCAAAAGCTCCTCC 59.458 55.000 0.00 0.00 0.00 4.30
3283 3758 7.669304 TCATTGAGAGTTGAAATCCATGGTAAA 59.331 33.333 12.58 0.00 0.00 2.01
3379 3921 0.972883 ACACAGGAGGAAGCTCAGTC 59.027 55.000 0.00 0.00 0.00 3.51
3380 3922 0.683973 CACACAGGAGGAAGCTCAGT 59.316 55.000 0.00 0.00 0.00 3.41
3381 3923 0.673022 GCACACAGGAGGAAGCTCAG 60.673 60.000 0.00 0.00 0.00 3.35
3382 3924 1.372683 GCACACAGGAGGAAGCTCA 59.627 57.895 0.00 0.00 0.00 4.26
3383 3925 1.739562 CGCACACAGGAGGAAGCTC 60.740 63.158 0.00 0.00 0.00 4.09
3384 3926 1.548357 ATCGCACACAGGAGGAAGCT 61.548 55.000 0.00 0.00 0.00 3.74
3385 3927 0.674895 AATCGCACACAGGAGGAAGC 60.675 55.000 0.00 0.00 0.00 3.86
3386 3928 1.081892 CAATCGCACACAGGAGGAAG 58.918 55.000 0.00 0.00 0.00 3.46
3389 3931 0.798776 GAACAATCGCACACAGGAGG 59.201 55.000 0.00 0.00 0.00 4.30
3390 3932 1.511850 TGAACAATCGCACACAGGAG 58.488 50.000 0.00 0.00 0.00 3.69
3391 3933 1.805943 CATGAACAATCGCACACAGGA 59.194 47.619 0.00 0.00 0.00 3.86
3392 3934 1.805943 TCATGAACAATCGCACACAGG 59.194 47.619 0.00 0.00 0.00 4.00
3393 3935 2.726989 GCTCATGAACAATCGCACACAG 60.727 50.000 0.00 0.00 0.00 3.66
3394 3936 1.197492 GCTCATGAACAATCGCACACA 59.803 47.619 0.00 0.00 0.00 3.72
3401 4462 6.989169 ACAGATTAGGTAGCTCATGAACAATC 59.011 38.462 0.00 0.39 0.00 2.67
3403 4464 6.299805 ACAGATTAGGTAGCTCATGAACAA 57.700 37.500 0.00 0.00 0.00 2.83
3407 4468 6.040955 CCTGTAACAGATTAGGTAGCTCATGA 59.959 42.308 0.00 0.00 32.44 3.07
3427 4492 2.234661 CTGCAACAGATGTCTCCCTGTA 59.765 50.000 0.00 0.00 42.25 2.74
3428 4493 1.002888 CTGCAACAGATGTCTCCCTGT 59.997 52.381 0.00 0.00 44.69 4.00
3434 4499 0.842030 TCCCCCTGCAACAGATGTCT 60.842 55.000 0.00 0.00 32.44 3.41
3449 4514 2.372172 CAGACCCACACCTTATATCCCC 59.628 54.545 0.00 0.00 0.00 4.81
3454 4520 3.025978 CGTACCAGACCCACACCTTATA 58.974 50.000 0.00 0.00 0.00 0.98
3457 4523 0.470456 TCGTACCAGACCCACACCTT 60.470 55.000 0.00 0.00 0.00 3.50
3458 4524 0.252103 ATCGTACCAGACCCACACCT 60.252 55.000 0.00 0.00 0.00 4.00
3466 4532 4.201685 CGTGAATTTTCCATCGTACCAGAC 60.202 45.833 0.00 0.00 0.00 3.51
3469 4535 3.666274 ACGTGAATTTTCCATCGTACCA 58.334 40.909 0.00 0.00 0.00 3.25
3470 4536 4.626604 TGTACGTGAATTTTCCATCGTACC 59.373 41.667 23.28 14.56 42.73 3.34
3473 4539 4.312443 AGTGTACGTGAATTTTCCATCGT 58.688 39.130 0.00 0.00 34.47 3.73
3477 4543 6.687081 AGAAAAGTGTACGTGAATTTTCCA 57.313 33.333 21.47 0.00 39.53 3.53
3478 4544 9.505995 TTTTAGAAAAGTGTACGTGAATTTTCC 57.494 29.630 21.47 10.93 39.53 3.13
3484 4565 8.117988 GTCACATTTTAGAAAAGTGTACGTGAA 58.882 33.333 0.00 0.00 33.16 3.18
3486 4567 6.568601 CGTCACATTTTAGAAAAGTGTACGTG 59.431 38.462 0.00 0.00 33.67 4.49
3488 4569 6.642917 ACGTCACATTTTAGAAAAGTGTACG 58.357 36.000 19.34 19.34 37.12 3.67
3538 4675 7.883391 TTGTTACATGGAAAGAACTTGGTAA 57.117 32.000 0.00 0.00 0.00 2.85
3542 4679 8.764287 GGATTTTTGTTACATGGAAAGAACTTG 58.236 33.333 0.00 0.00 0.00 3.16
3544 4681 8.143835 CAGGATTTTTGTTACATGGAAAGAACT 58.856 33.333 0.00 0.00 0.00 3.01
3545 4682 7.095649 GCAGGATTTTTGTTACATGGAAAGAAC 60.096 37.037 0.00 0.00 0.00 3.01
3548 4685 6.222389 TGCAGGATTTTTGTTACATGGAAAG 58.778 36.000 0.00 0.00 0.00 2.62
3551 4688 5.538053 TCTTGCAGGATTTTTGTTACATGGA 59.462 36.000 0.00 0.00 0.00 3.41
3553 4690 7.894376 AATCTTGCAGGATTTTTGTTACATG 57.106 32.000 17.63 0.00 32.69 3.21
3585 4724 6.877611 AGTGAACAATTTTCGTATTCACCT 57.122 33.333 10.85 0.00 46.67 4.00
3594 4733 5.447478 TTGTTGCAAGTGAACAATTTTCG 57.553 34.783 0.00 0.00 38.17 3.46
3625 4764 4.173256 CGAATAAACAACCCATGGCTTTC 58.827 43.478 6.09 0.00 0.00 2.62
3643 4782 3.627395 TGCCAAGAGTTCATACCGAAT 57.373 42.857 0.00 0.00 35.63 3.34
3647 4786 7.251281 GTTTTAGATTGCCAAGAGTTCATACC 58.749 38.462 0.00 0.00 0.00 2.73
3650 4789 5.774690 TGGTTTTAGATTGCCAAGAGTTCAT 59.225 36.000 0.00 0.00 0.00 2.57
3652 4791 5.705609 TGGTTTTAGATTGCCAAGAGTTC 57.294 39.130 0.00 0.00 0.00 3.01
3661 4800 7.307337 CCATCAAGTTTGTTGGTTTTAGATTGC 60.307 37.037 11.95 0.00 41.14 3.56
3680 4819 3.133542 TCCTCTGCTATGTGACCATCAAG 59.866 47.826 0.00 0.00 32.29 3.02
3686 4825 2.284190 GCTTTCCTCTGCTATGTGACC 58.716 52.381 0.00 0.00 0.00 4.02
3687 4826 2.935201 CTGCTTTCCTCTGCTATGTGAC 59.065 50.000 0.00 0.00 0.00 3.67
3697 4836 3.409384 GAGGGGCTGCTTTCCTCT 58.591 61.111 21.05 3.43 42.70 3.69
3706 4845 0.987294 TCTTTGAAGGAGAGGGGCTG 59.013 55.000 0.00 0.00 0.00 4.85
3709 4848 2.777832 CACTCTTTGAAGGAGAGGGG 57.222 55.000 11.49 0.00 43.88 4.79
3719 4858 2.777692 ACCTCCAACTTCCACTCTTTGA 59.222 45.455 0.00 0.00 0.00 2.69
3726 4865 1.235281 GCGGAACCTCCAACTTCCAC 61.235 60.000 0.00 0.00 36.47 4.02
3766 4905 5.094387 TCATCCTAGTTTCACTTCCCTCTT 58.906 41.667 0.00 0.00 0.00 2.85
3769 4908 4.226168 CCTTCATCCTAGTTTCACTTCCCT 59.774 45.833 0.00 0.00 0.00 4.20
3770 4909 4.518249 CCTTCATCCTAGTTTCACTTCCC 58.482 47.826 0.00 0.00 0.00 3.97
3776 4915 3.526899 TGACCCCTTCATCCTAGTTTCA 58.473 45.455 0.00 0.00 0.00 2.69
3778 4917 3.203040 CCATGACCCCTTCATCCTAGTTT 59.797 47.826 0.00 0.00 43.68 2.66
3790 4929 1.207488 TTAGCACTGCCATGACCCCT 61.207 55.000 0.00 0.00 0.00 4.79
3794 4933 1.438651 TCGTTTAGCACTGCCATGAC 58.561 50.000 0.00 0.00 0.00 3.06
3805 4944 5.591643 TCTTTGATGACACTTCGTTTAGC 57.408 39.130 0.00 0.00 0.00 3.09
3811 4950 4.537015 GGGTTTTCTTTGATGACACTTCG 58.463 43.478 0.00 0.00 0.00 3.79
3812 4951 4.556699 CGGGGTTTTCTTTGATGACACTTC 60.557 45.833 0.00 0.00 0.00 3.01
3816 4955 1.611491 GCGGGGTTTTCTTTGATGACA 59.389 47.619 0.00 0.00 0.00 3.58
3817 4956 1.401018 CGCGGGGTTTTCTTTGATGAC 60.401 52.381 0.00 0.00 0.00 3.06
3818 4957 0.878416 CGCGGGGTTTTCTTTGATGA 59.122 50.000 0.00 0.00 0.00 2.92
3820 4959 1.584495 GCGCGGGGTTTTCTTTGAT 59.416 52.632 8.83 0.00 0.00 2.57
3821 4960 2.557372 GGCGCGGGGTTTTCTTTGA 61.557 57.895 8.83 0.00 0.00 2.69
3822 4961 2.049526 GGCGCGGGGTTTTCTTTG 60.050 61.111 8.83 0.00 0.00 2.77
3844 4983 1.970640 GGATTGCCACTCCACCTTTTT 59.029 47.619 0.00 0.00 32.72 1.94
3847 4986 1.002134 CGGATTGCCACTCCACCTT 60.002 57.895 1.74 0.00 32.72 3.50
3859 5001 2.969443 AGAGTTTTTGCGACGGATTG 57.031 45.000 0.00 0.00 0.00 2.67
3861 5003 2.489971 TCAAGAGTTTTTGCGACGGAT 58.510 42.857 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.