Multiple sequence alignment - TraesCS6A01G230400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G230400 chr6A 100.000 5659 0 0 1 5659 434530589 434536247 0.000000e+00 10451.0
1 TraesCS6A01G230400 chr6A 93.088 217 15 0 5443 5659 583991835 583992051 9.150000e-83 318.0
2 TraesCS6A01G230400 chr6A 89.474 228 24 0 5432 5659 228534004 228533777 7.170000e-74 289.0
3 TraesCS6A01G230400 chr6A 86.842 190 24 1 5241 5429 228534227 228534038 1.600000e-50 211.0
4 TraesCS6A01G230400 chr6A 100.000 36 0 0 1 36 96988564 96988599 3.660000e-07 67.6
5 TraesCS6A01G230400 chr6D 97.117 3920 83 11 848 4753 290248106 290244203 0.000000e+00 6586.0
6 TraesCS6A01G230400 chr6D 94.966 735 21 4 119 850 290254013 290253292 0.000000e+00 1138.0
7 TraesCS6A01G230400 chr6D 87.193 367 38 3 4855 5212 290244206 290243840 5.280000e-110 409.0
8 TraesCS6A01G230400 chr6D 90.789 228 21 0 5432 5659 174381832 174382059 7.120000e-79 305.0
9 TraesCS6A01G230400 chr6D 87.895 190 22 1 5241 5429 174381609 174381798 7.380000e-54 222.0
10 TraesCS6A01G230400 chr6D 98.182 55 1 0 4857 4911 290243815 290243761 4.670000e-16 97.1
11 TraesCS6A01G230400 chr6D 100.000 28 0 0 4943 4970 77518121 77518148 1.000000e-02 52.8
12 TraesCS6A01G230400 chr6B 96.034 3076 65 10 327 3386 450805195 450808229 0.000000e+00 4951.0
13 TraesCS6A01G230400 chr6B 96.481 1222 21 2 3536 4755 450799891 450798690 0.000000e+00 1999.0
14 TraesCS6A01G230400 chr6B 86.316 190 25 1 5241 5429 394652793 394652982 7.430000e-49 206.0
15 TraesCS6A01G230400 chr6B 89.333 150 12 3 4855 5001 450798698 450798550 9.680000e-43 185.0
16 TraesCS6A01G230400 chr6B 95.000 40 2 0 165 204 450805157 450805196 4.730000e-06 63.9
17 TraesCS6A01G230400 chr4B 94.298 228 13 0 5432 5659 184859421 184859194 3.240000e-92 350.0
18 TraesCS6A01G230400 chr4B 100.000 33 0 0 1 33 499845250 499845218 1.700000e-05 62.1
19 TraesCS6A01G230400 chr3D 93.750 224 13 1 5435 5658 15214577 15214355 9.080000e-88 335.0
20 TraesCS6A01G230400 chr3D 88.542 192 21 1 5239 5429 15214805 15214614 1.230000e-56 231.0
21 TraesCS6A01G230400 chr3D 92.793 111 8 0 4748 4858 433566105 433565995 1.630000e-35 161.0
22 TraesCS6A01G230400 chr3D 100.000 34 0 0 1 34 614198649 614198682 4.730000e-06 63.9
23 TraesCS6A01G230400 chr3A 92.952 227 15 1 5432 5658 21173742 21173967 4.230000e-86 329.0
24 TraesCS6A01G230400 chr3A 89.516 124 13 0 4739 4862 648548898 648549021 2.110000e-34 158.0
25 TraesCS6A01G230400 chr3A 100.000 36 0 0 1 36 383359160 383359125 3.660000e-07 67.6
26 TraesCS6A01G230400 chr1B 91.589 214 18 0 5432 5645 325272980 325273193 4.290000e-76 296.0
27 TraesCS6A01G230400 chr1B 89.744 195 19 1 5236 5429 325272752 325272946 1.220000e-61 248.0
28 TraesCS6A01G230400 chr1B 84.252 127 20 0 1009 1135 633613626 633613500 2.140000e-24 124.0
29 TraesCS6A01G230400 chr1B 84.762 105 16 0 1061 1165 329942432 329942536 7.750000e-19 106.0
30 TraesCS6A01G230400 chr5D 89.381 226 24 0 5432 5657 441939384 441939159 9.280000e-73 285.0
31 TraesCS6A01G230400 chr5D 90.909 121 9 2 4752 4871 334801891 334802010 1.630000e-35 161.0
32 TraesCS6A01G230400 chr5D 90.678 118 10 1 4749 4865 424123658 424123541 7.590000e-34 156.0
33 TraesCS6A01G230400 chr5D 78.049 123 23 4 1060 1180 557050655 557050535 2.190000e-09 75.0
34 TraesCS6A01G230400 chr5D 100.000 33 0 0 1 33 504234373 504234341 1.700000e-05 62.1
35 TraesCS6A01G230400 chr1D 88.596 228 24 1 5432 5657 436110701 436110928 5.580000e-70 276.0
36 TraesCS6A01G230400 chr1D 85.586 111 16 0 1061 1171 248112271 248112161 3.580000e-22 117.0
37 TraesCS6A01G230400 chr1D 85.586 111 16 0 1061 1171 248202684 248202574 3.580000e-22 117.0
38 TraesCS6A01G230400 chr1D 76.437 174 35 2 1057 1224 4187821 4187648 7.810000e-14 89.8
39 TraesCS6A01G230400 chr1D 100.000 33 0 0 1 33 228800291 228800259 1.700000e-05 62.1
40 TraesCS6A01G230400 chr1D 100.000 33 0 0 1 33 256545723 256545755 1.700000e-05 62.1
41 TraesCS6A01G230400 chr2B 76.534 554 85 22 4915 5430 247365754 247365208 1.560000e-65 261.0
42 TraesCS6A01G230400 chr2D 75.388 516 95 23 4914 5401 372789772 372790283 2.650000e-53 220.0
43 TraesCS6A01G230400 chr2D 78.723 329 52 11 4913 5232 190329174 190328855 2.670000e-48 204.0
44 TraesCS6A01G230400 chr4D 87.368 190 23 1 5241 5429 46476022 46475833 3.430000e-52 217.0
45 TraesCS6A01G230400 chr5B 75.000 496 74 26 4950 5405 658865813 658866298 3.480000e-42 183.0
46 TraesCS6A01G230400 chr5B 74.747 495 77 24 4950 5405 658796789 658797274 1.620000e-40 178.0
47 TraesCS6A01G230400 chr5B 74.545 495 78 24 4950 5405 658831923 658832408 7.540000e-39 172.0
48 TraesCS6A01G230400 chr5B 74.343 495 79 24 4950 5405 658848125 658848610 3.510000e-37 167.0
49 TraesCS6A01G230400 chr5B 74.343 495 79 24 4950 5405 658883501 658883986 3.510000e-37 167.0
50 TraesCS6A01G230400 chr5B 74.141 495 80 24 4950 5405 658814117 658814602 1.630000e-35 161.0
51 TraesCS6A01G230400 chr7D 91.453 117 10 0 4742 4858 598012941 598013057 1.630000e-35 161.0
52 TraesCS6A01G230400 chr5A 92.793 111 8 0 4749 4859 16499952 16500062 1.630000e-35 161.0
53 TraesCS6A01G230400 chr5A 89.062 128 12 1 4749 4876 547790128 547790003 2.110000e-34 158.0
54 TraesCS6A01G230400 chr5A 90.083 121 12 0 4748 4868 680344708 680344828 2.110000e-34 158.0
55 TraesCS6A01G230400 chr5A 100.000 37 0 0 1 37 503781259 503781295 1.020000e-07 69.4
56 TraesCS6A01G230400 chr2A 90.083 121 12 0 4748 4868 187945781 187945901 2.110000e-34 158.0
57 TraesCS6A01G230400 chr7B 80.749 187 34 2 5239 5424 116126272 116126087 1.640000e-30 145.0
58 TraesCS6A01G230400 chr7B 100.000 36 0 0 1 36 567591959 567591994 3.660000e-07 67.6
59 TraesCS6A01G230400 chr1A 84.685 111 17 0 1061 1171 299104215 299104325 1.670000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G230400 chr6A 434530589 434536247 5658 False 10451.000000 10451 100.000 1 5659 1 chr6A.!!$F2 5658
1 TraesCS6A01G230400 chr6D 290243761 290248106 4345 True 2364.033333 6586 94.164 848 5212 3 chr6D.!!$R2 4364
2 TraesCS6A01G230400 chr6D 290253292 290254013 721 True 1138.000000 1138 94.966 119 850 1 chr6D.!!$R1 731
3 TraesCS6A01G230400 chr6B 450805157 450808229 3072 False 2507.450000 4951 95.517 165 3386 2 chr6B.!!$F2 3221
4 TraesCS6A01G230400 chr6B 450798550 450799891 1341 True 1092.000000 1999 92.907 3536 5001 2 chr6B.!!$R1 1465
5 TraesCS6A01G230400 chr2B 247365208 247365754 546 True 261.000000 261 76.534 4915 5430 1 chr2B.!!$R1 515
6 TraesCS6A01G230400 chr2D 372789772 372790283 511 False 220.000000 220 75.388 4914 5401 1 chr2D.!!$F1 487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 87 0.249953 TTAAAACTCACCGAGCCGCA 60.250 50.000 0.00 0.00 32.04 5.69 F
103 104 0.321996 GCACCGATAGAATCCCCCTC 59.678 60.000 0.00 0.00 39.76 4.30 F
104 105 0.603569 CACCGATAGAATCCCCCTCG 59.396 60.000 0.00 0.00 39.76 4.63 F
215 216 0.893447 CGGACGGTTCTCCTAACCTT 59.107 55.000 5.46 0.00 38.15 3.50 F
1054 1063 1.085091 CACTGGTGAGCATGAGAAGC 58.915 55.000 0.00 0.00 0.00 3.86 F
2382 2416 0.236187 TGAATTTTTCGCACCGTCCG 59.764 50.000 0.00 0.00 0.00 4.79 F
4020 4056 1.219980 TCCCTCCATCTGATCAGCTCT 59.780 52.381 18.36 2.21 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1436 1469 1.396301 CGAGTGCTTTCCTCAAGATGC 59.604 52.381 0.00 0.00 33.80 3.91 R
1734 1767 2.366266 CAATGTTGGCCAATCCATAGGG 59.634 50.000 23.66 10.46 46.04 3.53 R
1922 1956 3.898123 TCATACTAGAGCCAGGGACATTC 59.102 47.826 0.00 0.00 0.00 2.67 R
2046 2080 4.065088 CGAAGAAAATGAGAGGGTTGTCA 58.935 43.478 0.00 0.00 0.00 3.58 R
2769 2803 1.115467 ATCTCGGGCTCTGGTAGTTG 58.885 55.000 0.00 0.00 0.00 3.16 R
4029 4065 2.417933 CTGGAACCGAGATTTTCAGCTG 59.582 50.000 7.63 7.63 0.00 4.24 R
5135 5189 0.110486 AACCGGTGAAAGATGGCAGT 59.890 50.000 8.52 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.397672 GGAACGGAGGGAGTAGTACC 58.602 60.000 0.00 0.00 0.00 3.34
38 39 1.341383 GGAACGGAGGGAGTAGTACCA 60.341 57.143 0.40 0.00 0.00 3.25
39 40 2.450476 GAACGGAGGGAGTAGTACCAA 58.550 52.381 0.40 0.00 0.00 3.67
40 41 1.844687 ACGGAGGGAGTAGTACCAAC 58.155 55.000 0.40 0.00 0.00 3.77
41 42 0.737219 CGGAGGGAGTAGTACCAACG 59.263 60.000 0.40 0.96 0.00 4.10
42 43 1.679944 CGGAGGGAGTAGTACCAACGA 60.680 57.143 8.98 0.00 32.32 3.85
43 44 2.450476 GGAGGGAGTAGTACCAACGAA 58.550 52.381 0.40 0.00 0.00 3.85
44 45 2.827921 GGAGGGAGTAGTACCAACGAAA 59.172 50.000 0.40 0.00 0.00 3.46
45 46 3.450096 GGAGGGAGTAGTACCAACGAAAT 59.550 47.826 0.40 0.00 0.00 2.17
46 47 4.430908 GAGGGAGTAGTACCAACGAAATG 58.569 47.826 0.40 0.00 0.00 2.32
47 48 4.091549 AGGGAGTAGTACCAACGAAATGA 58.908 43.478 0.40 0.00 0.00 2.57
48 49 4.715297 AGGGAGTAGTACCAACGAAATGAT 59.285 41.667 0.40 0.00 0.00 2.45
49 50 5.048507 GGGAGTAGTACCAACGAAATGATC 58.951 45.833 0.00 0.00 0.00 2.92
50 51 5.163437 GGGAGTAGTACCAACGAAATGATCT 60.163 44.000 0.00 0.00 0.00 2.75
51 52 6.040166 GGGAGTAGTACCAACGAAATGATCTA 59.960 42.308 0.00 0.00 0.00 1.98
52 53 7.255871 GGGAGTAGTACCAACGAAATGATCTAT 60.256 40.741 0.00 0.00 0.00 1.98
53 54 7.595502 GGAGTAGTACCAACGAAATGATCTATG 59.404 40.741 0.00 0.00 0.00 2.23
54 55 8.008513 AGTAGTACCAACGAAATGATCTATGT 57.991 34.615 0.00 0.00 0.00 2.29
55 56 7.921214 AGTAGTACCAACGAAATGATCTATGTG 59.079 37.037 0.00 0.00 0.00 3.21
56 57 6.640518 AGTACCAACGAAATGATCTATGTGT 58.359 36.000 0.00 0.00 0.00 3.72
57 58 5.801350 ACCAACGAAATGATCTATGTGTG 57.199 39.130 0.00 0.00 0.00 3.82
58 59 4.635765 ACCAACGAAATGATCTATGTGTGG 59.364 41.667 0.00 0.00 0.00 4.17
59 60 4.496341 CCAACGAAATGATCTATGTGTGGC 60.496 45.833 0.00 0.00 0.00 5.01
60 61 3.206150 ACGAAATGATCTATGTGTGGCC 58.794 45.455 0.00 0.00 0.00 5.36
61 62 2.549754 CGAAATGATCTATGTGTGGCCC 59.450 50.000 0.00 0.00 0.00 5.80
62 63 3.554934 GAAATGATCTATGTGTGGCCCA 58.445 45.455 0.00 0.00 0.00 5.36
63 64 2.645838 ATGATCTATGTGTGGCCCAC 57.354 50.000 7.01 7.01 44.78 4.61
74 75 4.066646 GTGTGGCCCACAATTTAAAACT 57.933 40.909 20.19 0.00 46.28 2.66
75 76 4.055360 GTGTGGCCCACAATTTAAAACTC 58.945 43.478 20.19 0.00 46.28 3.01
76 77 3.706594 TGTGGCCCACAATTTAAAACTCA 59.293 39.130 15.73 0.00 41.69 3.41
77 78 4.055360 GTGGCCCACAATTTAAAACTCAC 58.945 43.478 9.55 0.00 34.08 3.51
78 79 3.070302 TGGCCCACAATTTAAAACTCACC 59.930 43.478 0.00 0.00 0.00 4.02
79 80 3.313690 GCCCACAATTTAAAACTCACCG 58.686 45.455 0.00 0.00 0.00 4.94
80 81 3.004944 GCCCACAATTTAAAACTCACCGA 59.995 43.478 0.00 0.00 0.00 4.69
81 82 4.794169 CCCACAATTTAAAACTCACCGAG 58.206 43.478 0.00 0.00 35.52 4.63
82 83 4.226761 CCACAATTTAAAACTCACCGAGC 58.773 43.478 0.00 0.00 32.04 5.03
83 84 4.226761 CACAATTTAAAACTCACCGAGCC 58.773 43.478 0.00 0.00 32.04 4.70
84 85 3.058501 ACAATTTAAAACTCACCGAGCCG 60.059 43.478 0.00 0.00 32.04 5.52
85 86 0.869730 TTTAAAACTCACCGAGCCGC 59.130 50.000 0.00 0.00 32.04 6.53
86 87 0.249953 TTAAAACTCACCGAGCCGCA 60.250 50.000 0.00 0.00 32.04 5.69
87 88 0.947180 TAAAACTCACCGAGCCGCAC 60.947 55.000 0.00 0.00 32.04 5.34
88 89 4.681978 AACTCACCGAGCCGCACC 62.682 66.667 0.00 0.00 32.04 5.01
92 93 4.201679 CACCGAGCCGCACCGATA 62.202 66.667 6.74 0.00 0.00 2.92
93 94 3.900892 ACCGAGCCGCACCGATAG 61.901 66.667 6.74 0.00 0.00 2.08
94 95 3.592814 CCGAGCCGCACCGATAGA 61.593 66.667 6.74 0.00 39.76 1.98
95 96 2.411701 CGAGCCGCACCGATAGAA 59.588 61.111 0.00 0.00 39.76 2.10
96 97 1.007271 CGAGCCGCACCGATAGAAT 60.007 57.895 0.00 0.00 39.76 2.40
97 98 1.004277 CGAGCCGCACCGATAGAATC 61.004 60.000 0.00 0.00 39.76 2.52
98 99 0.667792 GAGCCGCACCGATAGAATCC 60.668 60.000 0.00 0.00 39.76 3.01
99 100 1.668151 GCCGCACCGATAGAATCCC 60.668 63.158 0.00 0.00 39.76 3.85
100 101 1.004918 CCGCACCGATAGAATCCCC 60.005 63.158 0.00 0.00 39.76 4.81
101 102 1.004918 CGCACCGATAGAATCCCCC 60.005 63.158 0.00 0.00 39.76 5.40
102 103 1.472662 CGCACCGATAGAATCCCCCT 61.473 60.000 0.00 0.00 39.76 4.79
103 104 0.321996 GCACCGATAGAATCCCCCTC 59.678 60.000 0.00 0.00 39.76 4.30
104 105 0.603569 CACCGATAGAATCCCCCTCG 59.396 60.000 0.00 0.00 39.76 4.63
105 106 1.186267 ACCGATAGAATCCCCCTCGC 61.186 60.000 0.00 0.00 39.76 5.03
106 107 0.900647 CCGATAGAATCCCCCTCGCT 60.901 60.000 0.00 0.00 39.76 4.93
107 108 0.969894 CGATAGAATCCCCCTCGCTT 59.030 55.000 0.00 0.00 39.76 4.68
108 109 1.067495 CGATAGAATCCCCCTCGCTTC 60.067 57.143 0.00 0.00 39.76 3.86
109 110 2.252714 GATAGAATCCCCCTCGCTTCT 58.747 52.381 0.00 0.00 0.00 2.85
110 111 1.705873 TAGAATCCCCCTCGCTTCTC 58.294 55.000 0.00 0.00 0.00 2.87
111 112 1.068250 GAATCCCCCTCGCTTCTCG 59.932 63.158 0.00 0.00 40.15 4.04
112 113 2.980213 GAATCCCCCTCGCTTCTCGC 62.980 65.000 0.00 0.00 38.27 5.03
172 173 1.405821 GTCTCCATGACGACCTAGGTG 59.594 57.143 22.10 14.16 35.81 4.00
215 216 0.893447 CGGACGGTTCTCCTAACCTT 59.107 55.000 5.46 0.00 38.15 3.50
226 227 2.834549 CTCCTAACCTTCTTCTCAGCCA 59.165 50.000 0.00 0.00 0.00 4.75
335 338 2.046729 TGGGTTAGGTATGTCCCCTTCT 59.953 50.000 0.00 0.00 39.20 2.85
349 352 5.488919 TGTCCCCTTCTCAATTCTCAGTTAT 59.511 40.000 0.00 0.00 0.00 1.89
386 394 5.946942 TTTGGCTGAGAGTTGAGATATCT 57.053 39.130 4.47 4.47 0.00 1.98
406 414 5.227238 TCTGGTAATTTAGACGTCGACTC 57.773 43.478 14.70 10.15 0.00 3.36
813 822 1.613437 CAAACACAGGGGGCAAACTAG 59.387 52.381 0.00 0.00 0.00 2.57
891 900 3.860536 GCTCTGTGAAAGATACGGTCTTC 59.139 47.826 5.89 2.14 46.39 2.87
943 952 1.302993 GCTTCTTTACCCGGCCACA 60.303 57.895 2.24 0.00 0.00 4.17
1054 1063 1.085091 CACTGGTGAGCATGAGAAGC 58.915 55.000 0.00 0.00 0.00 3.86
1265 1274 3.387962 ACCTGAAGATTGATCCTAGGCA 58.612 45.455 2.96 0.00 0.00 4.75
1436 1469 1.683943 CATGTACCCAGCCCAGAATG 58.316 55.000 0.00 0.00 0.00 2.67
1734 1767 6.257849 CCAAACTTTGGTAAAGGCTTTTCTTC 59.742 38.462 18.93 6.69 45.93 2.87
1834 1867 2.327200 GGTCCACCCGAAGATTTAGG 57.673 55.000 0.00 0.00 0.00 2.69
1836 1869 2.026542 GGTCCACCCGAAGATTTAGGTT 60.027 50.000 0.00 0.00 0.00 3.50
1837 1870 3.268330 GTCCACCCGAAGATTTAGGTTC 58.732 50.000 0.00 0.00 0.00 3.62
1903 1937 4.665281 GCACATGTCTGATGCTGATATC 57.335 45.455 0.00 0.00 36.40 1.63
2014 2048 1.975660 TTGACAGGGTACACTTTGGC 58.024 50.000 0.00 0.00 0.00 4.52
2382 2416 0.236187 TGAATTTTTCGCACCGTCCG 59.764 50.000 0.00 0.00 0.00 4.79
3192 3226 1.352017 ACAATGATGACCAGCCAGTGA 59.648 47.619 0.00 0.00 31.33 3.41
3392 3426 8.458052 CACTTATCTAGAGTGCGATCTATGATT 58.542 37.037 0.00 0.00 38.20 2.57
3395 3429 6.641169 TCTAGAGTGCGATCTATGATTGTT 57.359 37.500 0.00 0.00 31.50 2.83
3416 3450 6.736581 TGTTTTGGGTGATATTGAAGGGATA 58.263 36.000 0.00 0.00 0.00 2.59
3430 3464 1.591863 GGATAGCTGGTCGTTCGGC 60.592 63.158 0.00 3.95 39.22 5.54
3692 3728 6.422400 GCACTTTGCCTACTTCTATAGCTAAG 59.578 42.308 0.00 0.00 37.42 2.18
3898 3934 6.645415 GGGTCACACTTATCTAATGATAACGG 59.355 42.308 0.00 0.00 39.46 4.44
4020 4056 1.219980 TCCCTCCATCTGATCAGCTCT 59.780 52.381 18.36 2.21 0.00 4.09
4029 4065 5.467399 CCATCTGATCAGCTCTGAAGATTTC 59.533 44.000 18.36 2.24 43.58 2.17
4259 4295 2.030562 AAAGTCGGCGTGGACCAG 59.969 61.111 6.85 0.00 37.66 4.00
4403 4439 7.559590 AGCACTGTGTATCTATGGAAATTTC 57.440 36.000 9.83 9.83 0.00 2.17
4465 4501 3.446310 TGCCATGATTAGCTGCAAATG 57.554 42.857 1.02 0.00 0.00 2.32
4484 4520 0.737715 GTGCTGTAGCTTCGGAGGTG 60.738 60.000 5.45 0.00 42.66 4.00
4541 4577 1.878953 ACTTGTCTAGCAAACCCACG 58.121 50.000 0.00 0.00 36.53 4.94
4550 4586 2.159382 AGCAAACCCACGATCGAATTT 58.841 42.857 24.34 12.67 0.00 1.82
4605 4641 1.066605 ACAAAGCAAAGACAGCAGCAG 59.933 47.619 0.00 0.00 0.00 4.24
4662 4698 2.977914 TCAGACAAACTGCCTAGCATC 58.022 47.619 0.00 0.00 45.38 3.91
4749 4785 2.093941 CGCGACTTCGTCTTCTTCTCTA 59.906 50.000 0.00 0.00 42.22 2.43
4750 4786 3.676540 GCGACTTCGTCTTCTTCTCTAG 58.323 50.000 0.00 0.00 42.22 2.43
4751 4787 3.125658 GCGACTTCGTCTTCTTCTCTAGT 59.874 47.826 0.00 0.00 42.22 2.57
4752 4788 4.329528 GCGACTTCGTCTTCTTCTCTAGTA 59.670 45.833 0.00 0.00 42.22 1.82
4753 4789 5.724769 GCGACTTCGTCTTCTTCTCTAGTAC 60.725 48.000 0.00 0.00 42.22 2.73
4754 4790 5.577945 CGACTTCGTCTTCTTCTCTAGTACT 59.422 44.000 0.00 0.00 34.11 2.73
4756 4792 5.876460 ACTTCGTCTTCTTCTCTAGTACTCC 59.124 44.000 0.00 0.00 0.00 3.85
4757 4793 4.768583 TCGTCTTCTTCTCTAGTACTCCC 58.231 47.826 0.00 0.00 0.00 4.30
4758 4794 4.470664 TCGTCTTCTTCTCTAGTACTCCCT 59.529 45.833 0.00 0.00 0.00 4.20
4759 4795 4.812626 CGTCTTCTTCTCTAGTACTCCCTC 59.187 50.000 0.00 0.00 0.00 4.30
4760 4796 5.128205 GTCTTCTTCTCTAGTACTCCCTCC 58.872 50.000 0.00 0.00 0.00 4.30
4761 4797 3.842007 TCTTCTCTAGTACTCCCTCCG 57.158 52.381 0.00 0.00 0.00 4.63
4762 4798 3.113824 TCTTCTCTAGTACTCCCTCCGT 58.886 50.000 0.00 0.00 0.00 4.69
4763 4799 3.522750 TCTTCTCTAGTACTCCCTCCGTT 59.477 47.826 0.00 0.00 0.00 4.44
4764 4800 3.557228 TCTCTAGTACTCCCTCCGTTC 57.443 52.381 0.00 0.00 0.00 3.95
4765 4801 2.172293 TCTCTAGTACTCCCTCCGTTCC 59.828 54.545 0.00 0.00 0.00 3.62
4766 4802 1.134280 TCTAGTACTCCCTCCGTTCCG 60.134 57.143 0.00 0.00 0.00 4.30
4767 4803 0.911769 TAGTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
4768 4804 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
4769 4805 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
4770 4806 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
4771 4807 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
4772 4808 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
4773 4809 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
4774 4810 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
4775 4811 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4776 4812 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4777 4813 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4778 4814 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
4779 4815 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
4780 4816 1.266211 CGTTCCGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 35.93 5.87
4781 4817 1.060122 GTTCCGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 40.06 6.46
4782 4818 0.458889 TCCGAATTACTTGTCGCGGG 60.459 55.000 6.13 0.00 39.24 6.13
4783 4819 0.738412 CCGAATTACTTGTCGCGGGT 60.738 55.000 6.13 3.16 35.93 5.28
4784 4820 1.469595 CCGAATTACTTGTCGCGGGTA 60.470 52.381 6.13 2.12 35.93 3.69
4785 4821 2.466846 CGAATTACTTGTCGCGGGTAT 58.533 47.619 6.13 0.00 0.00 2.73
4786 4822 2.217847 CGAATTACTTGTCGCGGGTATG 59.782 50.000 6.13 0.00 0.00 2.39
4787 4823 2.234300 ATTACTTGTCGCGGGTATGG 57.766 50.000 6.13 0.00 0.00 2.74
4788 4824 0.176219 TTACTTGTCGCGGGTATGGG 59.824 55.000 6.13 0.00 0.00 4.00
4789 4825 0.971959 TACTTGTCGCGGGTATGGGT 60.972 55.000 6.13 0.00 0.00 4.51
4790 4826 0.971959 ACTTGTCGCGGGTATGGGTA 60.972 55.000 6.13 0.00 0.00 3.69
4791 4827 0.391597 CTTGTCGCGGGTATGGGTAT 59.608 55.000 6.13 0.00 0.00 2.73
4792 4828 1.614903 CTTGTCGCGGGTATGGGTATA 59.385 52.381 6.13 0.00 0.00 1.47
4793 4829 1.927487 TGTCGCGGGTATGGGTATAT 58.073 50.000 6.13 0.00 0.00 0.86
4794 4830 1.820519 TGTCGCGGGTATGGGTATATC 59.179 52.381 6.13 0.00 0.00 1.63
4795 4831 2.097825 GTCGCGGGTATGGGTATATCT 58.902 52.381 6.13 0.00 0.00 1.98
4796 4832 3.282021 GTCGCGGGTATGGGTATATCTA 58.718 50.000 6.13 0.00 0.00 1.98
4797 4833 3.314635 GTCGCGGGTATGGGTATATCTAG 59.685 52.174 6.13 0.00 0.00 2.43
4798 4834 3.200605 TCGCGGGTATGGGTATATCTAGA 59.799 47.826 6.13 0.00 0.00 2.43
4799 4835 4.141321 TCGCGGGTATGGGTATATCTAGAT 60.141 45.833 10.73 10.73 0.00 1.98
4800 4836 4.023107 CGCGGGTATGGGTATATCTAGATG 60.023 50.000 15.79 0.00 0.00 2.90
4801 4837 4.894114 GCGGGTATGGGTATATCTAGATGT 59.106 45.833 15.79 11.37 0.00 3.06
4802 4838 6.066690 GCGGGTATGGGTATATCTAGATGTA 58.933 44.000 15.79 10.27 0.00 2.29
4803 4839 6.720288 GCGGGTATGGGTATATCTAGATGTAT 59.280 42.308 15.79 4.42 0.00 2.29
4804 4840 7.232941 GCGGGTATGGGTATATCTAGATGTATT 59.767 40.741 15.79 3.24 0.00 1.89
4805 4841 9.144298 CGGGTATGGGTATATCTAGATGTATTT 57.856 37.037 15.79 2.93 0.00 1.40
4852 4888 6.727824 ATGACGAGTAATTTGAAACAGAGG 57.272 37.500 0.00 0.00 0.00 3.69
4853 4889 4.994852 TGACGAGTAATTTGAAACAGAGGG 59.005 41.667 0.00 0.00 0.00 4.30
4890 4926 8.492920 GTAAAATCTTTTACGTGTTGTAACCC 57.507 34.615 0.00 0.00 42.63 4.11
4911 4947 3.119245 CCGCAAGTGTAGTGGTATGTACT 60.119 47.826 0.00 0.00 32.04 2.73
4912 4948 4.491676 CGCAAGTGTAGTGGTATGTACTT 58.508 43.478 0.00 0.00 0.00 2.24
4979 5018 6.704050 TGATGCATGAAGCCATTTTATTGATG 59.296 34.615 2.46 0.00 44.83 3.07
5010 5049 5.478679 TCCAAAACAAAGTCTCAAGTTCCAA 59.521 36.000 0.00 0.00 0.00 3.53
5013 5053 7.172361 CCAAAACAAAGTCTCAAGTTCCAAAAA 59.828 33.333 0.00 0.00 0.00 1.94
5024 5064 6.226787 TCAAGTTCCAAAAAGCTCACAAAAA 58.773 32.000 0.00 0.00 0.00 1.94
5062 5108 4.816385 TCAGTAAAAAGAGAACTGCCACAG 59.184 41.667 0.00 0.00 40.34 3.66
5135 5189 1.408702 GCCGGTTGTAGATAACCCGTA 59.591 52.381 1.90 0.00 45.84 4.02
5138 5192 3.489738 CCGGTTGTAGATAACCCGTACTG 60.490 52.174 0.00 0.00 45.84 2.74
5167 5221 0.623723 ACCGGTTGCACCCAATATCT 59.376 50.000 0.00 0.00 33.75 1.98
5192 5246 3.790437 CCCTGGAGTCCGCATGCT 61.790 66.667 17.13 0.00 0.00 3.79
5194 5248 1.522092 CCTGGAGTCCGCATGCTTA 59.478 57.895 17.13 0.00 0.00 3.09
5238 5292 2.393271 GCAGTGGCTCTGTGTATCTT 57.607 50.000 17.02 0.00 45.23 2.40
5239 5293 2.005451 GCAGTGGCTCTGTGTATCTTG 58.995 52.381 17.02 0.00 45.23 3.02
5245 5357 5.934625 AGTGGCTCTGTGTATCTTGTTAAAG 59.065 40.000 0.00 0.00 34.45 1.85
5246 5358 5.932303 GTGGCTCTGTGTATCTTGTTAAAGA 59.068 40.000 0.00 0.00 46.33 2.52
5312 5424 3.553375 TCCCTATCCGAATATGTCCCA 57.447 47.619 0.00 0.00 0.00 4.37
5319 5431 7.070696 CCCTATCCGAATATGTCCCACAATATA 59.929 40.741 0.00 0.00 0.00 0.86
5330 5442 6.910191 TGTCCCACAATATATGATTCCACTT 58.090 36.000 0.00 0.00 0.00 3.16
5332 5444 6.147821 GTCCCACAATATATGATTCCACTTCG 59.852 42.308 0.00 0.00 0.00 3.79
5333 5445 5.412594 CCCACAATATATGATTCCACTTCGG 59.587 44.000 0.00 0.00 0.00 4.30
5368 5480 9.189723 GTCCCAAATAACGTGTCTATACTAATC 57.810 37.037 0.00 0.00 0.00 1.75
5394 5506 8.746530 CGGAGGACTAACATTAAAGGCTATATA 58.253 37.037 0.00 0.00 0.00 0.86
5406 5519 4.230314 AGGCTATATATATCGTGCGCAG 57.770 45.455 12.22 5.26 0.00 5.18
5409 5522 4.261238 GGCTATATATATCGTGCGCAGAGT 60.261 45.833 12.22 1.15 0.00 3.24
5410 5523 5.274718 GCTATATATATCGTGCGCAGAGTT 58.725 41.667 12.22 5.94 0.00 3.01
5412 5525 2.863401 TATATCGTGCGCAGAGTTGT 57.137 45.000 12.22 4.34 0.00 3.32
5415 5528 0.512952 ATCGTGCGCAGAGTTGTTTC 59.487 50.000 12.22 0.00 0.00 2.78
5427 5540 3.132289 AGAGTTGTTTCGTGAGAGGACAA 59.868 43.478 0.00 0.00 42.04 3.18
5430 5543 2.143122 TGTTTCGTGAGAGGACAATGC 58.857 47.619 0.00 0.00 43.69 3.56
5431 5544 1.464997 GTTTCGTGAGAGGACAATGCC 59.535 52.381 0.00 0.00 43.69 4.40
5432 5545 0.684535 TTCGTGAGAGGACAATGCCA 59.315 50.000 0.00 0.00 43.69 4.92
5433 5546 0.037326 TCGTGAGAGGACAATGCCAC 60.037 55.000 0.00 0.00 34.84 5.01
5434 5547 0.320683 CGTGAGAGGACAATGCCACA 60.321 55.000 0.00 0.00 0.00 4.17
5435 5548 1.877680 CGTGAGAGGACAATGCCACAA 60.878 52.381 0.00 0.00 0.00 3.33
5436 5549 2.229792 GTGAGAGGACAATGCCACAAA 58.770 47.619 0.00 0.00 0.00 2.83
5437 5550 2.622942 GTGAGAGGACAATGCCACAAAA 59.377 45.455 0.00 0.00 0.00 2.44
5438 5551 3.068024 GTGAGAGGACAATGCCACAAAAA 59.932 43.478 0.00 0.00 0.00 1.94
5439 5552 3.068024 TGAGAGGACAATGCCACAAAAAC 59.932 43.478 0.00 0.00 0.00 2.43
5440 5553 3.030291 AGAGGACAATGCCACAAAAACA 58.970 40.909 0.00 0.00 0.00 2.83
5441 5554 3.450457 AGAGGACAATGCCACAAAAACAA 59.550 39.130 0.00 0.00 0.00 2.83
5442 5555 3.530535 AGGACAATGCCACAAAAACAAC 58.469 40.909 0.00 0.00 0.00 3.32
5443 5556 3.055530 AGGACAATGCCACAAAAACAACA 60.056 39.130 0.00 0.00 0.00 3.33
5444 5557 3.876320 GGACAATGCCACAAAAACAACAT 59.124 39.130 0.00 0.00 0.00 2.71
5445 5558 4.024977 GGACAATGCCACAAAAACAACATC 60.025 41.667 0.00 0.00 0.00 3.06
5446 5559 3.555139 ACAATGCCACAAAAACAACATCG 59.445 39.130 0.00 0.00 0.00 3.84
5447 5560 2.949451 TGCCACAAAAACAACATCGT 57.051 40.000 0.00 0.00 0.00 3.73
5448 5561 2.534298 TGCCACAAAAACAACATCGTG 58.466 42.857 0.00 0.00 0.00 4.35
5449 5562 2.164422 TGCCACAAAAACAACATCGTGA 59.836 40.909 0.00 0.00 0.00 4.35
5450 5563 3.182967 GCCACAAAAACAACATCGTGAA 58.817 40.909 0.00 0.00 0.00 3.18
5451 5564 3.000177 GCCACAAAAACAACATCGTGAAC 60.000 43.478 0.00 0.00 0.00 3.18
5452 5565 4.420168 CCACAAAAACAACATCGTGAACT 58.580 39.130 0.00 0.00 0.00 3.01
5453 5566 5.574082 CCACAAAAACAACATCGTGAACTA 58.426 37.500 0.00 0.00 0.00 2.24
5454 5567 5.454232 CCACAAAAACAACATCGTGAACTAC 59.546 40.000 0.00 0.00 0.00 2.73
5455 5568 5.454232 CACAAAAACAACATCGTGAACTACC 59.546 40.000 0.00 0.00 0.00 3.18
5456 5569 4.823790 AAAACAACATCGTGAACTACCC 57.176 40.909 0.00 0.00 0.00 3.69
5457 5570 3.478857 AACAACATCGTGAACTACCCA 57.521 42.857 0.00 0.00 0.00 4.51
5458 5571 2.762745 ACAACATCGTGAACTACCCAC 58.237 47.619 0.00 0.00 0.00 4.61
5459 5572 2.073816 CAACATCGTGAACTACCCACC 58.926 52.381 0.00 0.00 0.00 4.61
5460 5573 0.611714 ACATCGTGAACTACCCACCC 59.388 55.000 0.00 0.00 0.00 4.61
5461 5574 0.611200 CATCGTGAACTACCCACCCA 59.389 55.000 0.00 0.00 0.00 4.51
5462 5575 1.209504 CATCGTGAACTACCCACCCAT 59.790 52.381 0.00 0.00 0.00 4.00
5463 5576 0.899720 TCGTGAACTACCCACCCATC 59.100 55.000 0.00 0.00 0.00 3.51
5464 5577 0.902531 CGTGAACTACCCACCCATCT 59.097 55.000 0.00 0.00 0.00 2.90
5465 5578 1.278127 CGTGAACTACCCACCCATCTT 59.722 52.381 0.00 0.00 0.00 2.40
5466 5579 2.677037 CGTGAACTACCCACCCATCTTC 60.677 54.545 0.00 0.00 0.00 2.87
5467 5580 2.572104 GTGAACTACCCACCCATCTTCT 59.428 50.000 0.00 0.00 0.00 2.85
5468 5581 3.009143 GTGAACTACCCACCCATCTTCTT 59.991 47.826 0.00 0.00 0.00 2.52
5469 5582 3.655777 TGAACTACCCACCCATCTTCTTT 59.344 43.478 0.00 0.00 0.00 2.52
5470 5583 4.105697 TGAACTACCCACCCATCTTCTTTT 59.894 41.667 0.00 0.00 0.00 2.27
5471 5584 4.741928 ACTACCCACCCATCTTCTTTTT 57.258 40.909 0.00 0.00 0.00 1.94
5472 5585 5.853572 ACTACCCACCCATCTTCTTTTTA 57.146 39.130 0.00 0.00 0.00 1.52
5473 5586 5.567430 ACTACCCACCCATCTTCTTTTTAC 58.433 41.667 0.00 0.00 0.00 2.01
5474 5587 3.774734 ACCCACCCATCTTCTTTTTACC 58.225 45.455 0.00 0.00 0.00 2.85
5475 5588 3.141272 ACCCACCCATCTTCTTTTTACCA 59.859 43.478 0.00 0.00 0.00 3.25
5476 5589 4.156477 CCCACCCATCTTCTTTTTACCAA 58.844 43.478 0.00 0.00 0.00 3.67
5477 5590 4.777366 CCCACCCATCTTCTTTTTACCAAT 59.223 41.667 0.00 0.00 0.00 3.16
5478 5591 5.248248 CCCACCCATCTTCTTTTTACCAATT 59.752 40.000 0.00 0.00 0.00 2.32
5479 5592 6.239858 CCCACCCATCTTCTTTTTACCAATTT 60.240 38.462 0.00 0.00 0.00 1.82
5480 5593 7.038658 CCCACCCATCTTCTTTTTACCAATTTA 60.039 37.037 0.00 0.00 0.00 1.40
5481 5594 8.539544 CCACCCATCTTCTTTTTACCAATTTAT 58.460 33.333 0.00 0.00 0.00 1.40
5482 5595 9.586435 CACCCATCTTCTTTTTACCAATTTATC 57.414 33.333 0.00 0.00 0.00 1.75
5483 5596 8.758829 ACCCATCTTCTTTTTACCAATTTATCC 58.241 33.333 0.00 0.00 0.00 2.59
5484 5597 8.981659 CCCATCTTCTTTTTACCAATTTATCCT 58.018 33.333 0.00 0.00 0.00 3.24
5499 5612 9.942850 CCAATTTATCCTTGGTTAAAATCACTT 57.057 29.630 6.92 0.00 38.67 3.16
5502 5615 8.950007 TTTATCCTTGGTTAAAATCACTTCCT 57.050 30.769 1.64 0.00 0.00 3.36
5503 5616 8.950007 TTATCCTTGGTTAAAATCACTTCCTT 57.050 30.769 0.00 0.00 0.00 3.36
5504 5617 6.648879 TCCTTGGTTAAAATCACTTCCTTG 57.351 37.500 0.00 0.00 0.00 3.61
5505 5618 6.133356 TCCTTGGTTAAAATCACTTCCTTGT 58.867 36.000 0.00 0.00 0.00 3.16
5506 5619 6.040391 TCCTTGGTTAAAATCACTTCCTTGTG 59.960 38.462 0.00 0.00 39.15 3.33
5507 5620 5.782893 TGGTTAAAATCACTTCCTTGTGG 57.217 39.130 0.00 0.00 38.40 4.17
5508 5621 5.450453 TGGTTAAAATCACTTCCTTGTGGA 58.550 37.500 0.00 0.00 41.36 4.02
5509 5622 5.300792 TGGTTAAAATCACTTCCTTGTGGAC 59.699 40.000 0.00 0.00 43.06 4.02
5510 5623 5.300792 GGTTAAAATCACTTCCTTGTGGACA 59.699 40.000 0.00 0.00 43.06 4.02
5511 5624 6.183360 GGTTAAAATCACTTCCTTGTGGACAA 60.183 38.462 0.00 0.00 43.06 3.18
5512 5625 5.930837 AAAATCACTTCCTTGTGGACAAA 57.069 34.783 0.00 0.00 43.06 2.83
5513 5626 4.918810 AATCACTTCCTTGTGGACAAAC 57.081 40.909 0.00 0.00 43.06 2.93
5514 5627 2.650322 TCACTTCCTTGTGGACAAACC 58.350 47.619 0.00 0.00 43.06 3.27
5527 5640 5.867903 TGGACAAACCACATGAAGATTTT 57.132 34.783 0.00 0.00 44.64 1.82
5528 5641 5.599732 TGGACAAACCACATGAAGATTTTG 58.400 37.500 0.00 7.39 44.64 2.44
5529 5642 5.362143 TGGACAAACCACATGAAGATTTTGA 59.638 36.000 0.00 0.00 44.64 2.69
5530 5643 6.041865 TGGACAAACCACATGAAGATTTTGAT 59.958 34.615 0.00 0.00 44.64 2.57
5531 5644 6.930722 GGACAAACCACATGAAGATTTTGATT 59.069 34.615 0.00 0.00 38.79 2.57
5532 5645 7.116805 GGACAAACCACATGAAGATTTTGATTC 59.883 37.037 0.00 1.09 38.79 2.52
5533 5646 7.729116 ACAAACCACATGAAGATTTTGATTCT 58.271 30.769 0.00 0.00 0.00 2.40
5534 5647 8.206189 ACAAACCACATGAAGATTTTGATTCTT 58.794 29.630 0.00 0.00 36.16 2.52
5535 5648 9.695526 CAAACCACATGAAGATTTTGATTCTTA 57.304 29.630 0.00 0.00 33.65 2.10
5536 5649 9.918630 AAACCACATGAAGATTTTGATTCTTAG 57.081 29.630 0.00 0.00 33.65 2.18
5537 5650 7.542025 ACCACATGAAGATTTTGATTCTTAGC 58.458 34.615 0.00 0.00 33.65 3.09
5538 5651 6.690098 CCACATGAAGATTTTGATTCTTAGCG 59.310 38.462 0.00 0.00 33.65 4.26
5539 5652 6.690098 CACATGAAGATTTTGATTCTTAGCGG 59.310 38.462 0.00 0.00 33.65 5.52
5540 5653 6.599244 ACATGAAGATTTTGATTCTTAGCGGA 59.401 34.615 0.00 0.00 33.65 5.54
5541 5654 7.121168 ACATGAAGATTTTGATTCTTAGCGGAA 59.879 33.333 0.00 0.00 33.65 4.30
5542 5655 6.842163 TGAAGATTTTGATTCTTAGCGGAAC 58.158 36.000 0.00 0.00 33.65 3.62
5543 5656 6.655003 TGAAGATTTTGATTCTTAGCGGAACT 59.345 34.615 0.00 0.00 33.65 3.01
5544 5657 6.670077 AGATTTTGATTCTTAGCGGAACTC 57.330 37.500 0.00 0.00 0.00 3.01
5545 5658 6.410540 AGATTTTGATTCTTAGCGGAACTCT 58.589 36.000 0.00 0.00 0.00 3.24
5546 5659 7.556844 AGATTTTGATTCTTAGCGGAACTCTA 58.443 34.615 0.00 0.00 0.00 2.43
5547 5660 8.041323 AGATTTTGATTCTTAGCGGAACTCTAA 58.959 33.333 0.00 0.00 34.26 2.10
5548 5661 6.963049 TTTGATTCTTAGCGGAACTCTAAC 57.037 37.500 0.00 0.00 31.86 2.34
5549 5662 5.007385 TGATTCTTAGCGGAACTCTAACC 57.993 43.478 0.00 0.00 31.86 2.85
5550 5663 4.710375 TGATTCTTAGCGGAACTCTAACCT 59.290 41.667 0.00 0.00 31.86 3.50
5551 5664 5.187186 TGATTCTTAGCGGAACTCTAACCTT 59.813 40.000 0.00 0.00 31.86 3.50
5552 5665 4.715527 TCTTAGCGGAACTCTAACCTTC 57.284 45.455 0.00 0.00 31.86 3.46
5553 5666 3.446516 TCTTAGCGGAACTCTAACCTTCC 59.553 47.826 0.00 0.00 31.86 3.46
5554 5667 1.640917 AGCGGAACTCTAACCTTCCA 58.359 50.000 0.00 0.00 36.47 3.53
5555 5668 1.975680 AGCGGAACTCTAACCTTCCAA 59.024 47.619 0.00 0.00 36.47 3.53
5556 5669 2.370849 AGCGGAACTCTAACCTTCCAAA 59.629 45.455 0.00 0.00 36.47 3.28
5557 5670 3.009143 AGCGGAACTCTAACCTTCCAAAT 59.991 43.478 0.00 0.00 36.47 2.32
5558 5671 3.127030 GCGGAACTCTAACCTTCCAAATG 59.873 47.826 0.00 0.00 36.47 2.32
5559 5672 4.324267 CGGAACTCTAACCTTCCAAATGT 58.676 43.478 0.00 0.00 36.47 2.71
5560 5673 4.154195 CGGAACTCTAACCTTCCAAATGTG 59.846 45.833 0.00 0.00 36.47 3.21
5561 5674 5.313712 GGAACTCTAACCTTCCAAATGTGA 58.686 41.667 0.00 0.00 36.66 3.58
5562 5675 5.768164 GGAACTCTAACCTTCCAAATGTGAA 59.232 40.000 0.00 0.00 36.66 3.18
5563 5676 6.294010 GGAACTCTAACCTTCCAAATGTGAAC 60.294 42.308 0.00 0.00 36.66 3.18
5564 5677 4.755123 ACTCTAACCTTCCAAATGTGAACG 59.245 41.667 0.00 0.00 0.00 3.95
5565 5678 4.069304 TCTAACCTTCCAAATGTGAACGG 58.931 43.478 0.00 0.00 0.00 4.44
5566 5679 2.649531 ACCTTCCAAATGTGAACGGA 57.350 45.000 0.00 0.00 0.00 4.69
5567 5680 3.154827 ACCTTCCAAATGTGAACGGAT 57.845 42.857 0.00 0.00 0.00 4.18
5568 5681 3.081804 ACCTTCCAAATGTGAACGGATC 58.918 45.455 0.00 0.00 0.00 3.36
5569 5682 3.244911 ACCTTCCAAATGTGAACGGATCT 60.245 43.478 0.00 0.00 0.00 2.75
5570 5683 3.375299 CCTTCCAAATGTGAACGGATCTC 59.625 47.826 0.00 0.00 0.00 2.75
5571 5684 2.985896 TCCAAATGTGAACGGATCTCC 58.014 47.619 0.00 0.00 0.00 3.71
5572 5685 2.571653 TCCAAATGTGAACGGATCTCCT 59.428 45.455 0.00 0.00 0.00 3.69
5573 5686 3.009033 TCCAAATGTGAACGGATCTCCTT 59.991 43.478 0.00 0.00 0.00 3.36
5574 5687 4.224147 TCCAAATGTGAACGGATCTCCTTA 59.776 41.667 0.00 0.00 0.00 2.69
5575 5688 5.104527 TCCAAATGTGAACGGATCTCCTTAT 60.105 40.000 0.00 0.00 0.00 1.73
5576 5689 5.590259 CCAAATGTGAACGGATCTCCTTATT 59.410 40.000 0.00 0.00 0.00 1.40
5577 5690 6.458751 CCAAATGTGAACGGATCTCCTTATTG 60.459 42.308 0.00 0.00 0.00 1.90
5578 5691 4.137116 TGTGAACGGATCTCCTTATTGG 57.863 45.455 0.00 0.00 37.10 3.16
5579 5692 2.872858 GTGAACGGATCTCCTTATTGGC 59.127 50.000 0.00 0.00 35.26 4.52
5580 5693 2.158813 TGAACGGATCTCCTTATTGGCC 60.159 50.000 0.00 0.00 35.26 5.36
5581 5694 0.765510 ACGGATCTCCTTATTGGCCC 59.234 55.000 0.00 0.00 35.26 5.80
5582 5695 0.764890 CGGATCTCCTTATTGGCCCA 59.235 55.000 0.00 0.00 35.26 5.36
5583 5696 1.271054 CGGATCTCCTTATTGGCCCAG 60.271 57.143 0.00 0.00 35.26 4.45
5584 5697 2.057922 GGATCTCCTTATTGGCCCAGA 58.942 52.381 0.00 0.00 35.26 3.86
5585 5698 2.039613 GGATCTCCTTATTGGCCCAGAG 59.960 54.545 0.00 0.00 35.26 3.35
5586 5699 2.270434 TCTCCTTATTGGCCCAGAGT 57.730 50.000 0.00 0.00 35.26 3.24
5587 5700 2.562296 TCTCCTTATTGGCCCAGAGTT 58.438 47.619 0.00 0.00 35.26 3.01
5588 5701 3.731431 TCTCCTTATTGGCCCAGAGTTA 58.269 45.455 0.00 0.00 35.26 2.24
5589 5702 4.108570 TCTCCTTATTGGCCCAGAGTTAA 58.891 43.478 0.00 0.00 35.26 2.01
5590 5703 4.726825 TCTCCTTATTGGCCCAGAGTTAAT 59.273 41.667 0.00 0.00 35.26 1.40
5591 5704 5.193728 TCTCCTTATTGGCCCAGAGTTAATT 59.806 40.000 0.00 0.00 35.26 1.40
5592 5705 6.388689 TCTCCTTATTGGCCCAGAGTTAATTA 59.611 38.462 0.00 0.00 35.26 1.40
5593 5706 6.975949 TCCTTATTGGCCCAGAGTTAATTAA 58.024 36.000 0.00 0.00 35.26 1.40
5594 5707 7.060421 TCCTTATTGGCCCAGAGTTAATTAAG 58.940 38.462 0.00 0.00 35.26 1.85
5595 5708 6.833933 CCTTATTGGCCCAGAGTTAATTAAGT 59.166 38.462 5.20 5.20 0.00 2.24
5596 5709 7.013369 CCTTATTGGCCCAGAGTTAATTAAGTC 59.987 40.741 20.87 20.87 36.20 3.01
5597 5710 4.230745 TGGCCCAGAGTTAATTAAGTCC 57.769 45.455 23.53 12.93 36.52 3.85
5598 5711 3.589735 TGGCCCAGAGTTAATTAAGTCCA 59.410 43.478 23.53 14.93 36.52 4.02
5599 5712 4.043561 TGGCCCAGAGTTAATTAAGTCCAA 59.956 41.667 23.53 5.12 36.52 3.53
5600 5713 4.640647 GGCCCAGAGTTAATTAAGTCCAAG 59.359 45.833 23.53 15.86 36.52 3.61
5601 5714 5.254115 GCCCAGAGTTAATTAAGTCCAAGT 58.746 41.667 23.53 7.76 36.52 3.16
5602 5715 6.412214 GCCCAGAGTTAATTAAGTCCAAGTA 58.588 40.000 23.53 0.00 36.52 2.24
5603 5716 6.315642 GCCCAGAGTTAATTAAGTCCAAGTAC 59.684 42.308 23.53 9.75 36.52 2.73
5604 5717 7.391620 CCCAGAGTTAATTAAGTCCAAGTACA 58.608 38.462 23.53 0.00 36.52 2.90
5605 5718 8.047310 CCCAGAGTTAATTAAGTCCAAGTACAT 58.953 37.037 23.53 5.65 36.52 2.29
5616 5729 9.653287 TTAAGTCCAAGTACATAGATTTCACTG 57.347 33.333 0.00 0.00 0.00 3.66
5617 5730 7.246171 AGTCCAAGTACATAGATTTCACTGT 57.754 36.000 0.00 0.00 0.00 3.55
5618 5731 7.099764 AGTCCAAGTACATAGATTTCACTGTG 58.900 38.462 0.17 0.17 35.63 3.66
5619 5732 7.039011 AGTCCAAGTACATAGATTTCACTGTGA 60.039 37.037 6.36 6.36 34.10 3.58
5620 5733 7.602644 GTCCAAGTACATAGATTTCACTGTGAA 59.397 37.037 18.69 18.69 34.03 3.18
5631 5744 3.102052 TCACTGTGAAACTACCGTTCC 57.898 47.619 8.27 0.00 38.04 3.62
5632 5745 2.696707 TCACTGTGAAACTACCGTTCCT 59.303 45.455 8.27 0.00 38.04 3.36
5633 5746 3.890756 TCACTGTGAAACTACCGTTCCTA 59.109 43.478 8.27 0.00 38.04 2.94
5634 5747 4.022589 TCACTGTGAAACTACCGTTCCTAG 60.023 45.833 8.27 0.00 38.04 3.02
5635 5748 4.022589 CACTGTGAAACTACCGTTCCTAGA 60.023 45.833 0.32 0.00 38.04 2.43
5636 5749 4.771054 ACTGTGAAACTACCGTTCCTAGAT 59.229 41.667 0.00 0.00 38.04 1.98
5637 5750 5.948162 ACTGTGAAACTACCGTTCCTAGATA 59.052 40.000 0.00 0.00 38.04 1.98
5638 5751 6.435277 ACTGTGAAACTACCGTTCCTAGATAA 59.565 38.462 0.00 0.00 38.04 1.75
5639 5752 7.123847 ACTGTGAAACTACCGTTCCTAGATAAT 59.876 37.037 0.00 0.00 38.04 1.28
5640 5753 7.844009 TGTGAAACTACCGTTCCTAGATAATT 58.156 34.615 0.00 0.00 38.04 1.40
5641 5754 8.316214 TGTGAAACTACCGTTCCTAGATAATTT 58.684 33.333 0.00 0.00 38.04 1.82
5642 5755 8.815189 GTGAAACTACCGTTCCTAGATAATTTC 58.185 37.037 0.00 0.00 31.66 2.17
5643 5756 7.983484 TGAAACTACCGTTCCTAGATAATTTCC 59.017 37.037 0.00 0.00 31.66 3.13
5644 5757 7.427989 AACTACCGTTCCTAGATAATTTCCA 57.572 36.000 0.00 0.00 0.00 3.53
5645 5758 7.052142 ACTACCGTTCCTAGATAATTTCCAG 57.948 40.000 0.00 0.00 0.00 3.86
5646 5759 5.952347 ACCGTTCCTAGATAATTTCCAGT 57.048 39.130 0.00 0.00 0.00 4.00
5647 5760 5.671493 ACCGTTCCTAGATAATTTCCAGTG 58.329 41.667 0.00 0.00 0.00 3.66
5648 5761 5.057149 CCGTTCCTAGATAATTTCCAGTGG 58.943 45.833 1.40 1.40 0.00 4.00
5649 5762 5.163343 CCGTTCCTAGATAATTTCCAGTGGA 60.163 44.000 8.12 8.12 0.00 4.02
5650 5763 6.464465 CCGTTCCTAGATAATTTCCAGTGGAT 60.464 42.308 14.00 0.00 0.00 3.41
5651 5764 6.425114 CGTTCCTAGATAATTTCCAGTGGATG 59.575 42.308 14.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.040878 CCGTTCCGAATTAGTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
3 4 5.389859 TCCGTTCCGAATTAGTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
4 5 4.243270 CTCCGTTCCGAATTAGTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
5 6 3.368116 CCTCCGTTCCGAATTAGTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
6 7 2.928116 CCTCCGTTCCGAATTAGTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
7 8 2.354403 CCCTCCGTTCCGAATTAGTTGT 60.354 50.000 0.00 0.00 0.00 3.32
8 9 2.093869 TCCCTCCGTTCCGAATTAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
9 10 2.167900 CTCCCTCCGTTCCGAATTAGTT 59.832 50.000 0.00 0.00 0.00 2.24
10 11 1.755380 CTCCCTCCGTTCCGAATTAGT 59.245 52.381 0.00 0.00 0.00 2.24
11 12 1.755380 ACTCCCTCCGTTCCGAATTAG 59.245 52.381 0.00 0.00 0.00 1.73
12 13 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
13 14 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
14 15 1.341778 ACTACTCCCTCCGTTCCGAAT 60.342 52.381 0.00 0.00 0.00 3.34
15 16 0.038744 ACTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
16 17 0.911769 TACTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
17 18 1.020437 GTACTACTCCCTCCGTTCCG 58.980 60.000 0.00 0.00 0.00 4.30
18 19 1.341383 TGGTACTACTCCCTCCGTTCC 60.341 57.143 0.00 0.00 0.00 3.62
19 20 2.134789 TGGTACTACTCCCTCCGTTC 57.865 55.000 0.00 0.00 0.00 3.95
20 21 2.174360 GTTGGTACTACTCCCTCCGTT 58.826 52.381 0.00 0.00 0.00 4.44
21 22 1.844687 GTTGGTACTACTCCCTCCGT 58.155 55.000 0.00 0.00 0.00 4.69
22 23 0.737219 CGTTGGTACTACTCCCTCCG 59.263 60.000 0.00 0.00 0.00 4.63
23 24 2.134789 TCGTTGGTACTACTCCCTCC 57.865 55.000 0.00 0.00 0.00 4.30
24 25 4.159135 TCATTTCGTTGGTACTACTCCCTC 59.841 45.833 0.00 0.00 0.00 4.30
25 26 4.091549 TCATTTCGTTGGTACTACTCCCT 58.908 43.478 0.00 0.00 0.00 4.20
26 27 4.460948 TCATTTCGTTGGTACTACTCCC 57.539 45.455 0.00 0.00 0.00 4.30
27 28 5.903810 AGATCATTTCGTTGGTACTACTCC 58.096 41.667 0.00 0.00 0.00 3.85
28 29 8.136165 ACATAGATCATTTCGTTGGTACTACTC 58.864 37.037 0.00 0.00 0.00 2.59
29 30 7.921214 CACATAGATCATTTCGTTGGTACTACT 59.079 37.037 0.00 0.00 0.00 2.57
30 31 7.705325 ACACATAGATCATTTCGTTGGTACTAC 59.295 37.037 0.00 0.00 0.00 2.73
31 32 7.704899 CACACATAGATCATTTCGTTGGTACTA 59.295 37.037 0.00 0.00 0.00 1.82
32 33 6.535150 CACACATAGATCATTTCGTTGGTACT 59.465 38.462 0.00 0.00 0.00 2.73
33 34 6.238103 CCACACATAGATCATTTCGTTGGTAC 60.238 42.308 0.00 0.00 0.00 3.34
34 35 5.815222 CCACACATAGATCATTTCGTTGGTA 59.185 40.000 0.00 0.00 0.00 3.25
35 36 4.635765 CCACACATAGATCATTTCGTTGGT 59.364 41.667 0.00 0.00 0.00 3.67
36 37 4.496341 GCCACACATAGATCATTTCGTTGG 60.496 45.833 0.00 0.00 0.00 3.77
37 38 4.496341 GGCCACACATAGATCATTTCGTTG 60.496 45.833 0.00 0.00 0.00 4.10
38 39 3.627577 GGCCACACATAGATCATTTCGTT 59.372 43.478 0.00 0.00 0.00 3.85
39 40 3.206150 GGCCACACATAGATCATTTCGT 58.794 45.455 0.00 0.00 0.00 3.85
40 41 2.549754 GGGCCACACATAGATCATTTCG 59.450 50.000 4.39 0.00 0.00 3.46
41 42 3.554934 TGGGCCACACATAGATCATTTC 58.445 45.455 0.00 0.00 0.00 2.17
42 43 3.668141 TGGGCCACACATAGATCATTT 57.332 42.857 0.00 0.00 0.00 2.32
53 54 4.055360 GAGTTTTAAATTGTGGGCCACAC 58.945 43.478 37.75 23.10 44.47 3.82
54 55 3.706594 TGAGTTTTAAATTGTGGGCCACA 59.293 39.130 34.67 34.67 43.02 4.17
55 56 4.055360 GTGAGTTTTAAATTGTGGGCCAC 58.945 43.478 29.75 29.75 34.56 5.01
56 57 3.070302 GGTGAGTTTTAAATTGTGGGCCA 59.930 43.478 0.00 0.00 0.00 5.36
57 58 3.659786 GGTGAGTTTTAAATTGTGGGCC 58.340 45.455 0.00 0.00 0.00 5.80
58 59 3.004944 TCGGTGAGTTTTAAATTGTGGGC 59.995 43.478 0.00 0.00 0.00 5.36
59 60 4.794169 CTCGGTGAGTTTTAAATTGTGGG 58.206 43.478 0.00 0.00 0.00 4.61
60 61 4.226761 GCTCGGTGAGTTTTAAATTGTGG 58.773 43.478 0.00 0.00 31.39 4.17
61 62 4.226761 GGCTCGGTGAGTTTTAAATTGTG 58.773 43.478 0.00 0.00 31.39 3.33
62 63 3.058501 CGGCTCGGTGAGTTTTAAATTGT 60.059 43.478 0.00 0.00 31.39 2.71
63 64 3.488489 CGGCTCGGTGAGTTTTAAATTG 58.512 45.455 0.00 0.00 31.39 2.32
64 65 2.095415 GCGGCTCGGTGAGTTTTAAATT 60.095 45.455 0.00 0.00 31.39 1.82
65 66 1.467342 GCGGCTCGGTGAGTTTTAAAT 59.533 47.619 0.00 0.00 31.39 1.40
66 67 0.869730 GCGGCTCGGTGAGTTTTAAA 59.130 50.000 0.00 0.00 31.39 1.52
67 68 0.249953 TGCGGCTCGGTGAGTTTTAA 60.250 50.000 0.00 0.00 31.39 1.52
68 69 0.947180 GTGCGGCTCGGTGAGTTTTA 60.947 55.000 0.00 0.00 31.39 1.52
69 70 2.110213 TGCGGCTCGGTGAGTTTT 59.890 55.556 0.00 0.00 31.39 2.43
70 71 2.665185 GTGCGGCTCGGTGAGTTT 60.665 61.111 0.00 0.00 31.39 2.66
71 72 4.681978 GGTGCGGCTCGGTGAGTT 62.682 66.667 0.00 0.00 31.39 3.01
75 76 4.201679 TATCGGTGCGGCTCGGTG 62.202 66.667 14.05 0.21 0.00 4.94
76 77 3.900892 CTATCGGTGCGGCTCGGT 61.901 66.667 14.05 10.73 0.00 4.69
77 78 2.421877 ATTCTATCGGTGCGGCTCGG 62.422 60.000 14.05 9.31 0.00 4.63
78 79 1.004277 GATTCTATCGGTGCGGCTCG 61.004 60.000 0.00 5.75 0.00 5.03
79 80 0.667792 GGATTCTATCGGTGCGGCTC 60.668 60.000 0.00 0.00 0.00 4.70
80 81 1.367840 GGATTCTATCGGTGCGGCT 59.632 57.895 0.00 0.00 0.00 5.52
81 82 1.668151 GGGATTCTATCGGTGCGGC 60.668 63.158 0.00 0.00 0.00 6.53
82 83 1.004918 GGGGATTCTATCGGTGCGG 60.005 63.158 0.00 0.00 0.00 5.69
83 84 1.004918 GGGGGATTCTATCGGTGCG 60.005 63.158 0.00 0.00 0.00 5.34
84 85 0.321996 GAGGGGGATTCTATCGGTGC 59.678 60.000 0.00 0.00 0.00 5.01
85 86 0.603569 CGAGGGGGATTCTATCGGTG 59.396 60.000 0.00 0.00 0.00 4.94
86 87 1.186267 GCGAGGGGGATTCTATCGGT 61.186 60.000 0.00 0.00 34.11 4.69
87 88 0.900647 AGCGAGGGGGATTCTATCGG 60.901 60.000 0.00 0.00 34.11 4.18
88 89 0.969894 AAGCGAGGGGGATTCTATCG 59.030 55.000 0.00 0.00 36.51 2.92
89 90 2.232696 GAGAAGCGAGGGGGATTCTATC 59.767 54.545 0.00 0.00 42.27 2.08
90 91 2.252714 GAGAAGCGAGGGGGATTCTAT 58.747 52.381 0.00 0.00 42.27 1.98
91 92 1.705873 GAGAAGCGAGGGGGATTCTA 58.294 55.000 0.00 0.00 42.27 2.10
92 93 1.395826 CGAGAAGCGAGGGGGATTCT 61.396 60.000 0.00 0.00 44.66 2.40
93 94 1.068250 CGAGAAGCGAGGGGGATTC 59.932 63.158 0.00 0.00 44.57 2.52
94 95 3.095347 GCGAGAAGCGAGGGGGATT 62.095 63.158 0.00 0.00 44.57 3.01
95 96 3.541713 GCGAGAAGCGAGGGGGAT 61.542 66.667 0.00 0.00 44.57 3.85
111 112 3.140814 GATCAAACTGGCCCCGGC 61.141 66.667 0.00 0.00 41.06 6.13
112 113 2.440247 GGATCAAACTGGCCCCGG 60.440 66.667 0.00 0.00 0.00 5.73
113 114 2.824041 CGGATCAAACTGGCCCCG 60.824 66.667 0.00 0.00 0.00 5.73
114 115 1.749258 GACGGATCAAACTGGCCCC 60.749 63.158 0.00 0.00 0.00 5.80
115 116 1.749258 GGACGGATCAAACTGGCCC 60.749 63.158 0.00 0.00 38.33 5.80
116 117 2.106683 CGGACGGATCAAACTGGCC 61.107 63.158 0.00 0.00 40.73 5.36
117 118 2.750888 GCGGACGGATCAAACTGGC 61.751 63.158 0.00 0.00 0.00 4.85
172 173 3.487879 GGTCGATCGAGGAGAGAAGAAAC 60.488 52.174 20.09 1.90 0.00 2.78
215 216 1.203237 AGAGGAAGGTGGCTGAGAAGA 60.203 52.381 0.00 0.00 0.00 2.87
226 227 0.393267 CGAGGAGACGAGAGGAAGGT 60.393 60.000 0.00 0.00 35.09 3.50
335 338 4.922206 ACAAGGGCATAACTGAGAATTGA 58.078 39.130 0.00 0.00 0.00 2.57
366 374 3.640498 CCAGATATCTCAACTCTCAGCCA 59.360 47.826 1.03 0.00 0.00 4.75
375 383 9.182933 GACGTCTAAATTACCAGATATCTCAAC 57.817 37.037 8.70 0.00 0.00 3.18
386 394 3.758023 TGGAGTCGACGTCTAAATTACCA 59.242 43.478 14.70 10.56 0.00 3.25
406 414 7.282224 TCAAGATTTGTAAGGGTTAATCGATGG 59.718 37.037 0.00 0.00 33.38 3.51
417 425 4.701956 AATGCGTCAAGATTTGTAAGGG 57.298 40.909 0.00 0.00 0.00 3.95
807 816 9.442047 CACTTCATCTTCTAAATCCACTAGTTT 57.558 33.333 0.00 0.00 0.00 2.66
813 822 9.003658 TCTTTTCACTTCATCTTCTAAATCCAC 57.996 33.333 0.00 0.00 0.00 4.02
862 871 4.617067 CGTATCTTTCACAGAGCTCACACT 60.617 45.833 17.77 0.00 33.87 3.55
891 900 4.680110 AGTTCAGACGACACTTCAATAACG 59.320 41.667 0.00 0.00 0.00 3.18
904 913 2.095212 CAGGATCACGAAGTTCAGACGA 60.095 50.000 3.32 0.00 41.61 4.20
943 952 2.949644 GTGAAGCAACTGTAACTTGGGT 59.050 45.455 0.51 0.00 0.00 4.51
1054 1063 3.053896 GGAAACCACCTTCCGCCG 61.054 66.667 0.00 0.00 35.79 6.46
1436 1469 1.396301 CGAGTGCTTTCCTCAAGATGC 59.604 52.381 0.00 0.00 33.80 3.91
1734 1767 2.366266 CAATGTTGGCCAATCCATAGGG 59.634 50.000 23.66 10.46 46.04 3.53
1922 1956 3.898123 TCATACTAGAGCCAGGGACATTC 59.102 47.826 0.00 0.00 0.00 2.67
2014 2048 7.343316 TGGATTAAGGGTATATTTGGTTTGTGG 59.657 37.037 0.00 0.00 0.00 4.17
2046 2080 4.065088 CGAAGAAAATGAGAGGGTTGTCA 58.935 43.478 0.00 0.00 0.00 3.58
2135 2169 5.411361 TCCACGATAACCATGAAACAGAAAG 59.589 40.000 0.00 0.00 0.00 2.62
2376 2410 5.808540 TCAAAAAGTAAGATATGACGGACGG 59.191 40.000 0.00 0.00 0.00 4.79
2642 2676 6.960992 GCCATTCTTTTTGCCGAATTAATTTC 59.039 34.615 1.43 0.00 0.00 2.17
2769 2803 1.115467 ATCTCGGGCTCTGGTAGTTG 58.885 55.000 0.00 0.00 0.00 3.16
3158 3192 5.470098 GTCATCATTGTAGTTGAACACAGGT 59.530 40.000 0.00 0.00 0.00 4.00
3192 3226 4.898607 ACCATGAACGGTGCAACT 57.101 50.000 0.00 0.00 38.07 3.16
3308 3342 4.814234 TCGTCATTGTTGTTAAAGCAGTCT 59.186 37.500 0.00 0.00 0.00 3.24
3392 3426 5.004361 TCCCTTCAATATCACCCAAAACA 57.996 39.130 0.00 0.00 0.00 2.83
3395 3429 5.134339 AGCTATCCCTTCAATATCACCCAAA 59.866 40.000 0.00 0.00 0.00 3.28
3430 3464 5.822519 TCGATTTTTCCAGATAATGTGAGGG 59.177 40.000 0.00 0.00 0.00 4.30
4020 4056 5.122869 CCGAGATTTTCAGCTGAAATCTTCA 59.877 40.000 35.66 23.78 42.83 3.02
4029 4065 2.417933 CTGGAACCGAGATTTTCAGCTG 59.582 50.000 7.63 7.63 0.00 4.24
4259 4295 5.959618 ATACTTTCACACACTTAAAGCCC 57.040 39.130 0.00 0.00 34.31 5.19
4403 4439 1.741706 AGATGCTCGATGCCAAAACTG 59.258 47.619 4.73 0.00 42.00 3.16
4465 4501 0.737715 CACCTCCGAAGCTACAGCAC 60.738 60.000 3.70 0.00 45.16 4.40
4468 4504 2.969628 ATTCACCTCCGAAGCTACAG 57.030 50.000 0.00 0.00 0.00 2.74
4484 4520 4.383052 CGTATCGCATCCTTCACAGTATTC 59.617 45.833 0.00 0.00 0.00 1.75
4541 4577 9.781834 TGTTCATTTATTGTGGTAAATTCGATC 57.218 29.630 0.00 0.00 33.24 3.69
4605 4641 6.424509 CCGTTTAACCAAATTTTAGGGGAAAC 59.575 38.462 12.17 12.17 33.65 2.78
4662 4698 2.359531 GACTCCATCCTGACCTCTTACG 59.640 54.545 0.00 0.00 0.00 3.18
4761 4797 1.060122 CCGCGACAAGTAATTCGGAAC 59.940 52.381 8.23 0.00 39.23 3.62
4762 4798 1.352114 CCGCGACAAGTAATTCGGAA 58.648 50.000 8.23 0.00 39.23 4.30
4763 4799 0.458889 CCCGCGACAAGTAATTCGGA 60.459 55.000 8.23 0.00 39.23 4.55
4764 4800 0.738412 ACCCGCGACAAGTAATTCGG 60.738 55.000 8.23 0.00 35.73 4.30
4765 4801 1.912001 TACCCGCGACAAGTAATTCG 58.088 50.000 8.23 0.00 38.31 3.34
4766 4802 2.542595 CCATACCCGCGACAAGTAATTC 59.457 50.000 8.23 0.00 0.00 2.17
4767 4803 2.557317 CCATACCCGCGACAAGTAATT 58.443 47.619 8.23 0.00 0.00 1.40
4768 4804 1.202604 CCCATACCCGCGACAAGTAAT 60.203 52.381 8.23 0.00 0.00 1.89
4769 4805 0.176219 CCCATACCCGCGACAAGTAA 59.824 55.000 8.23 0.00 0.00 2.24
4770 4806 0.971959 ACCCATACCCGCGACAAGTA 60.972 55.000 8.23 4.04 0.00 2.24
4771 4807 0.971959 TACCCATACCCGCGACAAGT 60.972 55.000 8.23 1.45 0.00 3.16
4772 4808 0.391597 ATACCCATACCCGCGACAAG 59.608 55.000 8.23 0.00 0.00 3.16
4773 4809 1.702182 TATACCCATACCCGCGACAA 58.298 50.000 8.23 0.00 0.00 3.18
4774 4810 1.820519 GATATACCCATACCCGCGACA 59.179 52.381 8.23 0.00 0.00 4.35
4775 4811 2.097825 AGATATACCCATACCCGCGAC 58.902 52.381 8.23 0.00 0.00 5.19
4776 4812 2.519771 AGATATACCCATACCCGCGA 57.480 50.000 8.23 0.00 0.00 5.87
4777 4813 3.548770 TCTAGATATACCCATACCCGCG 58.451 50.000 0.00 0.00 0.00 6.46
4778 4814 4.894114 ACATCTAGATATACCCATACCCGC 59.106 45.833 4.54 0.00 0.00 6.13
4779 4815 8.707796 AATACATCTAGATATACCCATACCCG 57.292 38.462 4.54 0.00 0.00 5.28
4826 4862 9.529325 CCTCTGTTTCAAATTACTCGTCATATA 57.471 33.333 0.00 0.00 0.00 0.86
4827 4863 7.495934 CCCTCTGTTTCAAATTACTCGTCATAT 59.504 37.037 0.00 0.00 0.00 1.78
4828 4864 6.816640 CCCTCTGTTTCAAATTACTCGTCATA 59.183 38.462 0.00 0.00 0.00 2.15
4829 4865 5.643777 CCCTCTGTTTCAAATTACTCGTCAT 59.356 40.000 0.00 0.00 0.00 3.06
4830 4866 4.994852 CCCTCTGTTTCAAATTACTCGTCA 59.005 41.667 0.00 0.00 0.00 4.35
4831 4867 5.235516 TCCCTCTGTTTCAAATTACTCGTC 58.764 41.667 0.00 0.00 0.00 4.20
4832 4868 5.221661 ACTCCCTCTGTTTCAAATTACTCGT 60.222 40.000 0.00 0.00 0.00 4.18
4833 4869 5.238583 ACTCCCTCTGTTTCAAATTACTCG 58.761 41.667 0.00 0.00 0.00 4.18
4834 4870 7.387643 ACTACTCCCTCTGTTTCAAATTACTC 58.612 38.462 0.00 0.00 0.00 2.59
4835 4871 7.317722 ACTACTCCCTCTGTTTCAAATTACT 57.682 36.000 0.00 0.00 0.00 2.24
4836 4872 8.312564 AGTACTACTCCCTCTGTTTCAAATTAC 58.687 37.037 0.00 0.00 0.00 1.89
4837 4873 8.431910 AGTACTACTCCCTCTGTTTCAAATTA 57.568 34.615 0.00 0.00 0.00 1.40
4838 4874 7.317722 AGTACTACTCCCTCTGTTTCAAATT 57.682 36.000 0.00 0.00 0.00 1.82
4839 4875 6.936968 AGTACTACTCCCTCTGTTTCAAAT 57.063 37.500 0.00 0.00 0.00 2.32
4840 4876 7.508296 ACTTAGTACTACTCCCTCTGTTTCAAA 59.492 37.037 0.91 0.00 0.00 2.69
4841 4877 7.008941 ACTTAGTACTACTCCCTCTGTTTCAA 58.991 38.462 0.91 0.00 0.00 2.69
4842 4878 6.550163 ACTTAGTACTACTCCCTCTGTTTCA 58.450 40.000 0.91 0.00 0.00 2.69
4843 4879 8.572855 TTACTTAGTACTACTCCCTCTGTTTC 57.427 38.462 0.91 0.00 0.00 2.78
4844 4880 8.946797 TTTACTTAGTACTACTCCCTCTGTTT 57.053 34.615 0.91 0.00 0.00 2.83
4845 4881 8.946797 TTTTACTTAGTACTACTCCCTCTGTT 57.053 34.615 0.91 0.00 0.00 3.16
4846 4882 9.187996 GATTTTACTTAGTACTACTCCCTCTGT 57.812 37.037 0.91 0.00 0.00 3.41
4847 4883 9.411189 AGATTTTACTTAGTACTACTCCCTCTG 57.589 37.037 0.91 0.00 0.00 3.35
4848 4884 9.994017 AAGATTTTACTTAGTACTACTCCCTCT 57.006 33.333 0.91 0.00 0.00 3.69
4890 4926 4.106029 AGTACATACCACTACACTTGCG 57.894 45.455 0.00 0.00 0.00 4.85
4979 5018 5.949735 TGAGACTTTGTTTTGGAACTTCAC 58.050 37.500 0.00 0.00 36.70 3.18
5024 5064 8.632679 TCTTTTTACTGATTTGTTTCATGCTCT 58.367 29.630 0.00 0.00 0.00 4.09
5062 5108 2.230266 TCTTGGCTTATTTTTCACCGGC 59.770 45.455 0.00 0.00 0.00 6.13
5076 5123 6.789959 AGGATAGGTATTTAGTCATCTTGGCT 59.210 38.462 0.00 0.00 35.80 4.75
5135 5189 0.110486 AACCGGTGAAAGATGGCAGT 59.890 50.000 8.52 0.00 0.00 4.40
5138 5192 1.212751 GCAACCGGTGAAAGATGGC 59.787 57.895 8.52 0.00 0.00 4.40
5167 5221 0.902531 CGGACTCCAGGGAGCTTTTA 59.097 55.000 15.18 0.00 45.54 1.52
5260 5372 9.626045 GCATTATTTTGGGCTATATTGAACTAC 57.374 33.333 0.00 0.00 0.00 2.73
5312 5424 7.387948 GCTAACCGAAGTGGAATCATATATTGT 59.612 37.037 0.00 0.00 42.00 2.71
5319 5431 2.238646 TGGCTAACCGAAGTGGAATCAT 59.761 45.455 0.00 0.00 42.00 2.45
5330 5442 1.756408 TTTGGGACGTGGCTAACCGA 61.756 55.000 0.00 0.00 39.70 4.69
5332 5444 2.406596 TATTTGGGACGTGGCTAACC 57.593 50.000 0.00 0.00 0.00 2.85
5333 5445 2.094734 CGTTATTTGGGACGTGGCTAAC 59.905 50.000 0.00 0.00 34.75 2.34
5368 5480 4.138487 AGCCTTTAATGTTAGTCCTCCG 57.862 45.455 0.00 0.00 0.00 4.63
5394 5506 2.010145 AACAACTCTGCGCACGATAT 57.990 45.000 5.66 0.00 0.00 1.63
5395 5507 1.724623 GAAACAACTCTGCGCACGATA 59.275 47.619 5.66 0.00 0.00 2.92
5401 5513 0.111089 CTCACGAAACAACTCTGCGC 60.111 55.000 0.00 0.00 0.00 6.09
5402 5514 1.453524 CTCTCACGAAACAACTCTGCG 59.546 52.381 0.00 0.00 0.00 5.18
5406 5519 3.093717 TGTCCTCTCACGAAACAACTC 57.906 47.619 0.00 0.00 0.00 3.01
5409 5522 2.548057 GCATTGTCCTCTCACGAAACAA 59.452 45.455 0.00 0.00 32.64 2.83
5410 5523 2.143122 GCATTGTCCTCTCACGAAACA 58.857 47.619 0.00 0.00 0.00 2.83
5412 5525 1.071542 TGGCATTGTCCTCTCACGAAA 59.928 47.619 0.00 0.00 0.00 3.46
5415 5528 0.320683 TGTGGCATTGTCCTCTCACG 60.321 55.000 0.00 0.00 0.00 4.35
5427 5540 3.122297 CACGATGTTGTTTTTGTGGCAT 58.878 40.909 0.00 0.00 0.00 4.40
5430 5543 4.420168 AGTTCACGATGTTGTTTTTGTGG 58.580 39.130 0.00 0.00 0.00 4.17
5431 5544 5.454232 GGTAGTTCACGATGTTGTTTTTGTG 59.546 40.000 0.00 0.00 0.00 3.33
5432 5545 5.449451 GGGTAGTTCACGATGTTGTTTTTGT 60.449 40.000 0.00 0.00 0.00 2.83
5433 5546 4.973663 GGGTAGTTCACGATGTTGTTTTTG 59.026 41.667 0.00 0.00 0.00 2.44
5434 5547 4.641094 TGGGTAGTTCACGATGTTGTTTTT 59.359 37.500 0.00 0.00 0.00 1.94
5435 5548 4.035909 GTGGGTAGTTCACGATGTTGTTTT 59.964 41.667 0.00 0.00 0.00 2.43
5436 5549 3.562557 GTGGGTAGTTCACGATGTTGTTT 59.437 43.478 0.00 0.00 0.00 2.83
5437 5550 3.135994 GTGGGTAGTTCACGATGTTGTT 58.864 45.455 0.00 0.00 0.00 2.83
5438 5551 2.549349 GGTGGGTAGTTCACGATGTTGT 60.549 50.000 0.00 0.00 36.09 3.32
5439 5552 2.073816 GGTGGGTAGTTCACGATGTTG 58.926 52.381 0.00 0.00 36.09 3.33
5440 5553 1.002773 GGGTGGGTAGTTCACGATGTT 59.997 52.381 0.00 0.00 36.09 2.71
5441 5554 0.611714 GGGTGGGTAGTTCACGATGT 59.388 55.000 0.00 0.00 36.09 3.06
5442 5555 0.611200 TGGGTGGGTAGTTCACGATG 59.389 55.000 0.00 0.00 36.09 3.84
5443 5556 1.485066 GATGGGTGGGTAGTTCACGAT 59.515 52.381 0.00 0.00 36.09 3.73
5444 5557 0.899720 GATGGGTGGGTAGTTCACGA 59.100 55.000 0.00 0.00 36.09 4.35
5445 5558 0.902531 AGATGGGTGGGTAGTTCACG 59.097 55.000 0.00 0.00 36.09 4.35
5446 5559 2.572104 AGAAGATGGGTGGGTAGTTCAC 59.428 50.000 0.00 0.00 34.61 3.18
5447 5560 2.915869 AGAAGATGGGTGGGTAGTTCA 58.084 47.619 0.00 0.00 0.00 3.18
5448 5561 4.302559 AAAGAAGATGGGTGGGTAGTTC 57.697 45.455 0.00 0.00 0.00 3.01
5449 5562 4.741928 AAAAGAAGATGGGTGGGTAGTT 57.258 40.909 0.00 0.00 0.00 2.24
5450 5563 4.741928 AAAAAGAAGATGGGTGGGTAGT 57.258 40.909 0.00 0.00 0.00 2.73
5451 5564 4.948004 GGTAAAAAGAAGATGGGTGGGTAG 59.052 45.833 0.00 0.00 0.00 3.18
5452 5565 4.354387 TGGTAAAAAGAAGATGGGTGGGTA 59.646 41.667 0.00 0.00 0.00 3.69
5453 5566 3.141272 TGGTAAAAAGAAGATGGGTGGGT 59.859 43.478 0.00 0.00 0.00 4.51
5454 5567 3.773560 TGGTAAAAAGAAGATGGGTGGG 58.226 45.455 0.00 0.00 0.00 4.61
5455 5568 6.358974 AATTGGTAAAAAGAAGATGGGTGG 57.641 37.500 0.00 0.00 0.00 4.61
5456 5569 9.586435 GATAAATTGGTAAAAAGAAGATGGGTG 57.414 33.333 0.00 0.00 0.00 4.61
5457 5570 8.758829 GGATAAATTGGTAAAAAGAAGATGGGT 58.241 33.333 0.00 0.00 0.00 4.51
5458 5571 8.981659 AGGATAAATTGGTAAAAAGAAGATGGG 58.018 33.333 0.00 0.00 0.00 4.00
5476 5589 9.547279 AGGAAGTGATTTTAACCAAGGATAAAT 57.453 29.630 2.91 1.39 0.00 1.40
5477 5590 8.950007 AGGAAGTGATTTTAACCAAGGATAAA 57.050 30.769 0.00 0.00 0.00 1.40
5478 5591 8.802267 CAAGGAAGTGATTTTAACCAAGGATAA 58.198 33.333 0.00 0.00 0.00 1.75
5479 5592 7.947890 ACAAGGAAGTGATTTTAACCAAGGATA 59.052 33.333 0.00 0.00 0.00 2.59
5480 5593 6.782494 ACAAGGAAGTGATTTTAACCAAGGAT 59.218 34.615 0.00 0.00 0.00 3.24
5481 5594 6.040391 CACAAGGAAGTGATTTTAACCAAGGA 59.960 38.462 0.00 0.00 42.05 3.36
5482 5595 6.215845 CACAAGGAAGTGATTTTAACCAAGG 58.784 40.000 0.00 0.00 42.05 3.61
5483 5596 6.040391 TCCACAAGGAAGTGATTTTAACCAAG 59.960 38.462 0.00 0.00 42.23 3.61
5484 5597 5.894393 TCCACAAGGAAGTGATTTTAACCAA 59.106 36.000 0.00 0.00 42.23 3.67
5485 5598 5.450453 TCCACAAGGAAGTGATTTTAACCA 58.550 37.500 0.00 0.00 42.23 3.67
5505 5618 5.362143 TCAAAATCTTCATGTGGTTTGTCCA 59.638 36.000 0.00 0.00 45.01 4.02
5506 5619 5.841810 TCAAAATCTTCATGTGGTTTGTCC 58.158 37.500 0.00 0.00 0.00 4.02
5507 5620 7.869429 AGAATCAAAATCTTCATGTGGTTTGTC 59.131 33.333 0.00 0.00 0.00 3.18
5508 5621 7.729116 AGAATCAAAATCTTCATGTGGTTTGT 58.271 30.769 0.00 0.00 0.00 2.83
5509 5622 8.597662 AAGAATCAAAATCTTCATGTGGTTTG 57.402 30.769 0.00 3.26 31.61 2.93
5510 5623 9.918630 CTAAGAATCAAAATCTTCATGTGGTTT 57.081 29.630 0.00 0.00 38.13 3.27
5511 5624 8.031277 GCTAAGAATCAAAATCTTCATGTGGTT 58.969 33.333 0.00 0.00 38.13 3.67
5512 5625 7.542025 GCTAAGAATCAAAATCTTCATGTGGT 58.458 34.615 0.00 0.00 38.13 4.16
5513 5626 6.690098 CGCTAAGAATCAAAATCTTCATGTGG 59.310 38.462 0.00 0.00 38.13 4.17
5514 5627 6.690098 CCGCTAAGAATCAAAATCTTCATGTG 59.310 38.462 0.00 0.00 38.13 3.21
5515 5628 6.599244 TCCGCTAAGAATCAAAATCTTCATGT 59.401 34.615 0.00 0.00 38.13 3.21
5516 5629 7.019774 TCCGCTAAGAATCAAAATCTTCATG 57.980 36.000 0.00 0.00 38.13 3.07
5517 5630 7.337942 AGTTCCGCTAAGAATCAAAATCTTCAT 59.662 33.333 0.00 0.00 38.13 2.57
5518 5631 6.655003 AGTTCCGCTAAGAATCAAAATCTTCA 59.345 34.615 0.00 0.00 38.13 3.02
5519 5632 7.065204 AGAGTTCCGCTAAGAATCAAAATCTTC 59.935 37.037 0.00 0.00 38.13 2.87
5520 5633 6.881602 AGAGTTCCGCTAAGAATCAAAATCTT 59.118 34.615 0.00 0.00 40.18 2.40
5521 5634 6.410540 AGAGTTCCGCTAAGAATCAAAATCT 58.589 36.000 0.00 0.00 0.00 2.40
5522 5635 6.670077 AGAGTTCCGCTAAGAATCAAAATC 57.330 37.500 0.00 0.00 0.00 2.17
5523 5636 7.065923 GGTTAGAGTTCCGCTAAGAATCAAAAT 59.934 37.037 0.00 0.00 0.00 1.82
5524 5637 6.370718 GGTTAGAGTTCCGCTAAGAATCAAAA 59.629 38.462 0.00 0.00 0.00 2.44
5525 5638 5.873164 GGTTAGAGTTCCGCTAAGAATCAAA 59.127 40.000 0.00 0.00 0.00 2.69
5526 5639 5.187186 AGGTTAGAGTTCCGCTAAGAATCAA 59.813 40.000 0.00 0.00 0.00 2.57
5527 5640 4.710375 AGGTTAGAGTTCCGCTAAGAATCA 59.290 41.667 0.00 0.00 0.00 2.57
5528 5641 5.265350 AGGTTAGAGTTCCGCTAAGAATC 57.735 43.478 0.00 0.00 0.00 2.52
5529 5642 5.395435 GGAAGGTTAGAGTTCCGCTAAGAAT 60.395 44.000 0.00 0.00 33.21 2.40
5530 5643 4.081807 GGAAGGTTAGAGTTCCGCTAAGAA 60.082 45.833 0.00 0.00 33.21 2.52
5531 5644 3.446516 GGAAGGTTAGAGTTCCGCTAAGA 59.553 47.826 0.00 0.00 33.21 2.10
5532 5645 3.194968 TGGAAGGTTAGAGTTCCGCTAAG 59.805 47.826 0.00 0.00 44.63 2.18
5533 5646 3.167485 TGGAAGGTTAGAGTTCCGCTAA 58.833 45.455 0.00 0.00 44.63 3.09
5534 5647 2.811410 TGGAAGGTTAGAGTTCCGCTA 58.189 47.619 0.00 0.00 44.63 4.26
5535 5648 1.640917 TGGAAGGTTAGAGTTCCGCT 58.359 50.000 0.00 0.00 44.63 5.52
5536 5649 2.467566 TTGGAAGGTTAGAGTTCCGC 57.532 50.000 0.00 0.00 44.63 5.54
5537 5650 4.154195 CACATTTGGAAGGTTAGAGTTCCG 59.846 45.833 0.00 0.00 44.63 4.30
5538 5651 5.313712 TCACATTTGGAAGGTTAGAGTTCC 58.686 41.667 0.00 0.00 42.39 3.62
5539 5652 6.565999 CGTTCACATTTGGAAGGTTAGAGTTC 60.566 42.308 0.00 0.00 0.00 3.01
5540 5653 5.238650 CGTTCACATTTGGAAGGTTAGAGTT 59.761 40.000 0.00 0.00 0.00 3.01
5541 5654 4.755123 CGTTCACATTTGGAAGGTTAGAGT 59.245 41.667 0.00 0.00 0.00 3.24
5542 5655 4.154195 CCGTTCACATTTGGAAGGTTAGAG 59.846 45.833 0.00 0.00 0.00 2.43
5543 5656 4.069304 CCGTTCACATTTGGAAGGTTAGA 58.931 43.478 0.00 0.00 0.00 2.10
5544 5657 4.069304 TCCGTTCACATTTGGAAGGTTAG 58.931 43.478 0.00 0.00 0.00 2.34
5545 5658 4.088056 TCCGTTCACATTTGGAAGGTTA 57.912 40.909 0.00 0.00 0.00 2.85
5546 5659 2.938838 TCCGTTCACATTTGGAAGGTT 58.061 42.857 0.00 0.00 0.00 3.50
5547 5660 2.649531 TCCGTTCACATTTGGAAGGT 57.350 45.000 0.00 0.00 0.00 3.50
5548 5661 3.347216 AGATCCGTTCACATTTGGAAGG 58.653 45.455 0.00 0.00 33.48 3.46
5549 5662 3.375299 GGAGATCCGTTCACATTTGGAAG 59.625 47.826 0.00 0.00 33.48 3.46
5550 5663 3.009033 AGGAGATCCGTTCACATTTGGAA 59.991 43.478 0.00 0.00 42.08 3.53
5551 5664 2.571653 AGGAGATCCGTTCACATTTGGA 59.428 45.455 0.00 0.00 42.08 3.53
5552 5665 2.991250 AGGAGATCCGTTCACATTTGG 58.009 47.619 0.00 0.00 42.08 3.28
5553 5666 6.458751 CCAATAAGGAGATCCGTTCACATTTG 60.459 42.308 0.00 0.00 41.22 2.32
5554 5667 5.590259 CCAATAAGGAGATCCGTTCACATTT 59.410 40.000 0.00 0.00 41.22 2.32
5555 5668 5.126067 CCAATAAGGAGATCCGTTCACATT 58.874 41.667 0.00 0.00 41.22 2.71
5556 5669 4.708177 CCAATAAGGAGATCCGTTCACAT 58.292 43.478 0.00 0.00 41.22 3.21
5557 5670 3.681594 GCCAATAAGGAGATCCGTTCACA 60.682 47.826 0.00 0.00 41.22 3.58
5558 5671 2.872858 GCCAATAAGGAGATCCGTTCAC 59.127 50.000 0.00 0.00 41.22 3.18
5559 5672 2.158813 GGCCAATAAGGAGATCCGTTCA 60.159 50.000 0.00 0.00 41.22 3.18
5560 5673 2.495084 GGCCAATAAGGAGATCCGTTC 58.505 52.381 0.00 0.00 41.22 3.95
5561 5674 1.143073 GGGCCAATAAGGAGATCCGTT 59.857 52.381 4.39 0.00 41.22 4.44
5562 5675 0.765510 GGGCCAATAAGGAGATCCGT 59.234 55.000 4.39 0.00 41.22 4.69
5563 5676 0.764890 TGGGCCAATAAGGAGATCCG 59.235 55.000 2.13 0.00 41.22 4.18
5564 5677 2.039613 CTCTGGGCCAATAAGGAGATCC 59.960 54.545 8.04 0.00 41.22 3.36
5565 5678 2.708325 ACTCTGGGCCAATAAGGAGATC 59.292 50.000 22.35 0.00 41.22 2.75
5566 5679 2.781667 ACTCTGGGCCAATAAGGAGAT 58.218 47.619 22.35 7.57 41.22 2.75
5567 5680 2.270434 ACTCTGGGCCAATAAGGAGA 57.730 50.000 22.35 7.82 41.22 3.71
5568 5681 4.503714 TTAACTCTGGGCCAATAAGGAG 57.496 45.455 15.90 15.90 41.22 3.69
5569 5682 5.466127 AATTAACTCTGGGCCAATAAGGA 57.534 39.130 8.04 0.00 41.22 3.36
5570 5683 6.833933 ACTTAATTAACTCTGGGCCAATAAGG 59.166 38.462 8.04 0.00 41.84 2.69
5571 5684 7.013369 GGACTTAATTAACTCTGGGCCAATAAG 59.987 40.741 8.04 8.21 0.00 1.73
5572 5685 6.831868 GGACTTAATTAACTCTGGGCCAATAA 59.168 38.462 8.04 5.47 0.00 1.40
5573 5686 6.069323 TGGACTTAATTAACTCTGGGCCAATA 60.069 38.462 8.04 0.00 0.00 1.90
5574 5687 5.201243 GGACTTAATTAACTCTGGGCCAAT 58.799 41.667 8.04 0.00 0.00 3.16
5575 5688 4.043561 TGGACTTAATTAACTCTGGGCCAA 59.956 41.667 8.04 0.00 0.00 4.52
5576 5689 3.589735 TGGACTTAATTAACTCTGGGCCA 59.410 43.478 5.85 5.85 0.00 5.36
5577 5690 4.230745 TGGACTTAATTAACTCTGGGCC 57.769 45.455 0.00 0.00 0.00 5.80
5578 5691 5.254115 ACTTGGACTTAATTAACTCTGGGC 58.746 41.667 0.00 0.00 0.00 5.36
5579 5692 7.391620 TGTACTTGGACTTAATTAACTCTGGG 58.608 38.462 0.00 0.00 0.00 4.45
5590 5703 9.653287 CAGTGAAATCTATGTACTTGGACTTAA 57.347 33.333 0.00 0.00 0.00 1.85
5591 5704 8.812972 ACAGTGAAATCTATGTACTTGGACTTA 58.187 33.333 0.00 0.00 0.00 2.24
5592 5705 7.604164 CACAGTGAAATCTATGTACTTGGACTT 59.396 37.037 0.00 0.00 0.00 3.01
5593 5706 7.039011 TCACAGTGAAATCTATGTACTTGGACT 60.039 37.037 0.00 0.00 0.00 3.85
5594 5707 7.097192 TCACAGTGAAATCTATGTACTTGGAC 58.903 38.462 0.00 0.00 0.00 4.02
5595 5708 7.239763 TCACAGTGAAATCTATGTACTTGGA 57.760 36.000 0.00 0.00 0.00 3.53
5596 5709 7.905604 TTCACAGTGAAATCTATGTACTTGG 57.094 36.000 13.90 0.00 32.71 3.61
5597 5710 8.993121 AGTTTCACAGTGAAATCTATGTACTTG 58.007 33.333 27.57 0.00 46.55 3.16
5599 5712 9.640963 GTAGTTTCACAGTGAAATCTATGTACT 57.359 33.333 27.57 20.35 46.55 2.73
5600 5713 8.870879 GGTAGTTTCACAGTGAAATCTATGTAC 58.129 37.037 27.57 19.92 46.55 2.90
5601 5714 7.758076 CGGTAGTTTCACAGTGAAATCTATGTA 59.242 37.037 27.57 12.28 46.55 2.29
5602 5715 6.590292 CGGTAGTTTCACAGTGAAATCTATGT 59.410 38.462 27.57 13.07 46.55 2.29
5603 5716 6.590292 ACGGTAGTTTCACAGTGAAATCTATG 59.410 38.462 27.57 23.31 46.55 2.23
5604 5717 6.698380 ACGGTAGTTTCACAGTGAAATCTAT 58.302 36.000 27.57 17.40 46.55 1.98
5605 5718 6.092955 ACGGTAGTTTCACAGTGAAATCTA 57.907 37.500 27.57 24.18 46.55 1.98
5606 5719 4.957296 ACGGTAGTTTCACAGTGAAATCT 58.043 39.130 27.57 24.98 46.55 2.40
5607 5720 5.333875 GGAACGGTAGTTTCACAGTGAAATC 60.334 44.000 27.57 20.68 46.55 2.17
5608 5721 4.514066 GGAACGGTAGTTTCACAGTGAAAT 59.486 41.667 27.57 19.10 46.55 2.17
5609 5722 3.872771 GGAACGGTAGTTTCACAGTGAAA 59.127 43.478 22.53 22.53 43.37 2.69
5610 5723 3.133362 AGGAACGGTAGTTTCACAGTGAA 59.867 43.478 12.24 12.24 41.34 3.18
5611 5724 2.696707 AGGAACGGTAGTTTCACAGTGA 59.303 45.455 0.00 0.00 41.34 3.41
5612 5725 3.107642 AGGAACGGTAGTTTCACAGTG 57.892 47.619 0.00 0.00 41.34 3.66
5613 5726 4.147321 TCTAGGAACGGTAGTTTCACAGT 58.853 43.478 0.00 0.00 41.34 3.55
5614 5727 4.778534 TCTAGGAACGGTAGTTTCACAG 57.221 45.455 0.00 0.00 41.34 3.66
5615 5728 6.839124 TTATCTAGGAACGGTAGTTTCACA 57.161 37.500 0.00 0.00 41.34 3.58
5616 5729 8.713737 AAATTATCTAGGAACGGTAGTTTCAC 57.286 34.615 0.00 0.00 41.34 3.18
5617 5730 7.983484 GGAAATTATCTAGGAACGGTAGTTTCA 59.017 37.037 0.00 0.00 41.34 2.69
5618 5731 7.983484 TGGAAATTATCTAGGAACGGTAGTTTC 59.017 37.037 0.00 0.00 41.34 2.78
5619 5732 7.854337 TGGAAATTATCTAGGAACGGTAGTTT 58.146 34.615 0.00 0.00 41.34 2.66
5620 5733 7.125356 ACTGGAAATTATCTAGGAACGGTAGTT 59.875 37.037 0.00 0.00 40.76 2.24
5621 5734 6.610425 ACTGGAAATTATCTAGGAACGGTAGT 59.390 38.462 0.00 0.00 40.76 2.73
5622 5735 6.924060 CACTGGAAATTATCTAGGAACGGTAG 59.076 42.308 0.00 0.00 40.76 3.18
5623 5736 6.183360 CCACTGGAAATTATCTAGGAACGGTA 60.183 42.308 0.00 0.00 40.76 4.02
5624 5737 5.396436 CCACTGGAAATTATCTAGGAACGGT 60.396 44.000 0.00 0.00 40.76 4.83
5625 5738 5.057149 CCACTGGAAATTATCTAGGAACGG 58.943 45.833 0.00 0.00 40.76 4.44
5626 5739 5.914033 TCCACTGGAAATTATCTAGGAACG 58.086 41.667 0.00 0.00 40.76 3.95
5627 5740 7.736447 CATCCACTGGAAATTATCTAGGAAC 57.264 40.000 0.66 0.00 40.76 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.